##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM226621v1 #!genome-build-accession NCBI_Assembly:GCF_002266215.1 #!annotation-date 04/15/2025 21:40:11 #!annotation-source NCBI RefSeq GCF_002266215.1-RS_2025_04_15 ##sequence-region NZ_NPME01000001.1 1 1394624 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000001.1 RefSeq region 1 1394624 . + . ID=NZ_NPME01000001.1:1..1394624;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000001.1 RefSeq gene 152 3676 . - . ID=gene-CCO35_RS00005;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=CCO35_RS00005;old_locus_tag=CCO35_00005 NZ_NPME01000001.1 Protein Homology CDS 152 3676 . - 0 ID=cds-WP_031569164.1;Parent=gene-CCO35_RS00005;Dbxref=GenBank:WP_031569164.1;Name=WP_031569164.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=CCO35_RS00005;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_031569164.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 3737 4048 . - . ID=gene-CCO35_RS00010;Name=CCO35_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00010;old_locus_tag=CCO35_00010 NZ_NPME01000001.1 Protein Homology CDS 3737 4048 . - 0 ID=cds-WP_031601775.1;Parent=gene-CCO35_RS00010;Dbxref=GenBank:WP_031601775.1;Name=WP_031601775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=CCO35_RS00010;product=hypothetical protein;protein_id=WP_031601775.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 3952 4218 . + . ID=gene-CCO35_RS00015;Name=CCO35_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00015;old_locus_tag=CCO35_00015 NZ_NPME01000001.1 Protein Homology CDS 3952 4218 . + 0 ID=cds-WP_001200679.1;Parent=gene-CCO35_RS00015;Dbxref=GenBank:WP_001200679.1;Name=WP_001200679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=CCO35_RS00015;product=putative hemolysin;protein_id=WP_001200679.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 4262 4672 . - . ID=gene-CCO35_RS00020;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=CCO35_RS00020;old_locus_tag=CCO35_00020 NZ_NPME01000001.1 Protein Homology CDS 4262 4672 . - 0 ID=cds-WP_000725238.1;Parent=gene-CCO35_RS00020;Dbxref=GenBank:WP_000725238.1;Name=WP_000725238.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=CCO35_RS00020;product=heat shock protein HslJ;protein_id=WP_000725238.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 4783 5772 . - . ID=gene-CCO35_RS00025;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=CCO35_RS00025;old_locus_tag=CCO35_00025 NZ_NPME01000001.1 Protein Homology CDS 4783 5772 . - 0 ID=cds-WP_000762206.1;Parent=gene-CCO35_RS00025;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=CCO35_RS00025;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 6039 8675 . + . ID=gene-CCO35_RS00030;Name=CCO35_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00030;old_locus_tag=CCO35_00030 NZ_NPME01000001.1 Protein Homology CDS 6039 8675 . + 0 ID=cds-WP_000677033.1;Parent=gene-CCO35_RS00030;Dbxref=GenBank:WP_000677033.1;Name=WP_000677033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=CCO35_RS00030;product=YdbH family protein;protein_id=WP_000677033.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 8675 8866 . + . ID=gene-CCO35_RS00035;Name=CCO35_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00035;old_locus_tag=CCO35_00035 NZ_NPME01000001.1 Protein Homology CDS 8675 8866 . + 0 ID=cds-WP_000784063.1;Parent=gene-CCO35_RS00035;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=CCO35_RS00035;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 8874 9197 . + . ID=gene-CCO35_RS00040;Name=CCO35_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00040;old_locus_tag=CCO35_00040 NZ_NPME01000001.1 Protein Homology CDS 8874 9197 . + 0 ID=cds-WP_000760414.1;Parent=gene-CCO35_RS00040;Dbxref=GenBank:WP_000760414.1;Name=WP_000760414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=CCO35_RS00040;product=YdbL family protein;protein_id=WP_000760414.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 9341 9790 . + . ID=gene-CCO35_RS00045;Name=CCO35_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00045;old_locus_tag=CCO35_00045 NZ_NPME01000001.1 Protein Homology CDS 9341 9790 . + 0 ID=cds-WP_001518898.1;Parent=gene-CCO35_RS00045;Dbxref=GenBank:WP_001518898.1;Name=WP_001518898.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=CCO35_RS00045;product=GFA family protein;protein_id=WP_001518898.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 9787 10392 . - . ID=gene-CCO35_RS00050;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=CCO35_RS00050;old_locus_tag=CCO35_00050 NZ_NPME01000001.1 Protein Homology CDS 9787 10392 . - 0 ID=cds-WP_000048931.1;Parent=gene-CCO35_RS00050;Dbxref=GenBank:WP_000048931.1;Name=WP_000048931.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=CCO35_RS00050;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048931.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 10593 14495 . + . ID=gene-CCO35_RS00055;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=CCO35_RS00055;old_locus_tag=CCO35_00055 NZ_NPME01000001.1 Protein Homology CDS 10593 14495 . + 0 ID=cds-WP_031569150.1;Parent=gene-CCO35_RS00055;Dbxref=GenBank:WP_031569150.1;Name=WP_031569150.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=CCO35_RS00055;product=ATP-dependent RNA helicase HrpA;protein_id=WP_031569150.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 14559 15359 . + . ID=gene-CCO35_RS00060;Name=CCO35_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00060;old_locus_tag=CCO35_00060 NZ_NPME01000001.1 Protein Homology CDS 14559 15359 . + 0 ID=cds-WP_001098520.1;Parent=gene-CCO35_RS00060;Dbxref=GenBank:WP_001098520.1;Name=WP_001098520.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=CCO35_RS00060;product=YdcF family protein;protein_id=WP_001098520.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 15476 16006 . + . ID=gene-CCO35_RS00065;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=CCO35_RS00065;old_locus_tag=CCO35_00065 NZ_NPME01000001.1 Protein Homology CDS 15476 16006 . + 0 ID=cds-WP_000527279.1;Parent=gene-CCO35_RS00065;Dbxref=GenBank:WP_000527279.1;Name=WP_000527279.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=CCO35_RS00065;product=cytochrome b561;protein_id=WP_000527279.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 16278 16940 . - . ID=gene-CCO35_RS00070;Name=CCO35_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00070;old_locus_tag=CCO35_00070 NZ_NPME01000001.1 Protein Homology CDS 16278 16940 . - 0 ID=cds-WP_001611673.1;Parent=gene-CCO35_RS00070;Dbxref=GenBank:WP_001611673.1;Name=WP_001611673.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=CCO35_RS00070;product=class I SAM-dependent methyltransferase;protein_id=WP_001611673.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 17404 18954 . - . ID=gene-CCO35_RS00075;Name=CCO35_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00075;old_locus_tag=CCO35_00075 NZ_NPME01000001.1 Protein Homology CDS 17404 18954 . - 0 ID=cds-WP_031569148.1;Parent=gene-CCO35_RS00075;Dbxref=GenBank:WP_031569148.1;Name=WP_031569148.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=CCO35_RS00075;product=glycosyltransferase family 39 protein;protein_id=WP_031569148.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 19091 19771 . - . ID=gene-CCO35_RS00080;Name=CCO35_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00080;old_locus_tag=CCO35_00080 NZ_NPME01000001.1 Protein Homology CDS 19091 19771 . - 0 ID=cds-WP_000560165.1;Parent=gene-CCO35_RS00080;Dbxref=GenBank:WP_000560165.1;Name=WP_000560165.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=CCO35_RS00080;product=amino acid ABC transporter permease;protein_id=WP_000560165.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 19768 20499 . - . ID=gene-CCO35_RS00085;Name=CCO35_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00085;old_locus_tag=CCO35_00085 NZ_NPME01000001.1 Protein Homology CDS 19768 20499 . - 0 ID=cds-WP_001185903.1;Parent=gene-CCO35_RS00085;Dbxref=GenBank:WP_001185903.1;Name=WP_001185903.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=CCO35_RS00085;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001185903.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 20524 21171 . - . ID=gene-CCO35_RS00090;Name=CCO35_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00090;old_locus_tag=CCO35_00090 NZ_NPME01000001.1 Protein Homology CDS 20524 21171 . - 0 ID=cds-WP_031569143.1;Parent=gene-CCO35_RS00090;Dbxref=GenBank:WP_031569143.1;Name=WP_031569143.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=CCO35_RS00090;product=amino acid ABC transporter permease;protein_id=WP_031569143.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 21178 21939 . - . ID=gene-CCO35_RS00095;Name=CCO35_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00095;old_locus_tag=CCO35_00095 NZ_NPME01000001.1 Protein Homology CDS 21178 21939 . - 0 ID=cds-WP_000897695.1;Parent=gene-CCO35_RS00095;Dbxref=GenBank:WP_000897695.1;Name=WP_000897695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=CCO35_RS00095;product=transporter substrate-binding domain-containing protein;protein_id=WP_000897695.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 22849 23193 . + . ID=gene-CCO35_RS00100;Name=CCO35_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00100;old_locus_tag=CCO35_00100 NZ_NPME01000001.1 Protein Homology CDS 22849 23193 . + 0 ID=cds-WP_000281190.1;Parent=gene-CCO35_RS00100;Dbxref=GenBank:WP_000281190.1;Name=WP_000281190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=CCO35_RS00100;product=DUF1294 domain-containing protein;protein_id=WP_000281190.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 23314 24540 . - . ID=gene-CCO35_RS00105;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=CCO35_RS00105;old_locus_tag=CCO35_00105 NZ_NPME01000001.1 Protein Homology CDS 23314 24540 . - 0 ID=cds-WP_001131418.1;Parent=gene-CCO35_RS00105;Dbxref=GenBank:WP_001131418.1;Name=WP_001131418.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=CCO35_RS00105;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_001131418.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 24966 25682 . + . ID=gene-CCO35_RS00110;Name=CCO35_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00110;old_locus_tag=CCO35_00110 NZ_NPME01000001.1 Protein Homology CDS 24966 25682 . + 0 ID=cds-WP_001527697.1;Parent=gene-CCO35_RS00110;Dbxref=GenBank:WP_001527697.1;Name=WP_001527697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=CCO35_RS00110;product=hypothetical protein;protein_id=WP_001527697.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 25811 26212 . - . ID=gene-CCO35_RS00115;Name=CCO35_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00115;old_locus_tag=CCO35_00115 NZ_NPME01000001.1 Protein Homology CDS 25811 26212 . - 0 ID=cds-WP_077905323.1;Parent=gene-CCO35_RS00115;Dbxref=GenBank:WP_077905323.1;Name=WP_077905323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=CCO35_RS00115;product=effector protein;protein_id=WP_077905323.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 26736 27011 . + . ID=gene-CCO35_RS00120;Name=CCO35_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00120;old_locus_tag=CCO35_00120 NZ_NPME01000001.1 Protein Homology CDS 26736 27011 . + 0 ID=cds-WP_001120770.1;Parent=gene-CCO35_RS00120;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=CCO35_RS00120;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 27043 28161 . + . ID=gene-CCO35_RS00125;Name=CCO35_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00125;old_locus_tag=CCO35_00125 NZ_NPME01000001.1 Protein Homology CDS 27043 28161 . + 0 ID=cds-WP_000842138.1;Parent=gene-CCO35_RS00125;Dbxref=GenBank:WP_000842138.1;Name=WP_000842138.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=CCO35_RS00125;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842138.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 28330 29955 . + . ID=gene-CCO35_RS00135;Name=CCO35_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00135;old_locus_tag=CCO35_00135 NZ_NPME01000001.1 Protein Homology CDS 28330 29955 . + 0 ID=cds-WP_031569135.1;Parent=gene-CCO35_RS00135;Dbxref=GenBank:WP_031569135.1;Name=WP_031569135.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=CCO35_RS00135;product=methyl-accepting chemotaxis protein;protein_id=WP_031569135.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 30016 30939 . - . ID=gene-CCO35_RS00140;Name=CCO35_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00140;old_locus_tag=CCO35_00140 NZ_NPME01000001.1 Protein Homology CDS 30016 30939 . - 0 ID=cds-WP_000414259.1;Parent=gene-CCO35_RS00140;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=CCO35_RS00140;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 31232 32575 . + . ID=gene-CCO35_RS00145;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=CCO35_RS00145;old_locus_tag=CCO35_00145 NZ_NPME01000001.1 Protein Homology CDS 31232 32575 . + 0 ID=cds-WP_000024089.1;Parent=gene-CCO35_RS00145;Dbxref=GenBank:WP_000024089.1;Name=WP_000024089.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=CCO35_RS00145;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000024089.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 32624 34132 . + . ID=gene-CCO35_RS00150;Name=CCO35_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00150;old_locus_tag=CCO35_00150 NZ_NPME01000001.1 Protein Homology CDS 32624 34132 . + 0 ID=cds-WP_031569127.1;Parent=gene-CCO35_RS00150;Dbxref=GenBank:WP_031569127.1;Name=WP_031569127.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=CCO35_RS00150;product=carboxylesterase/lipase family protein;protein_id=WP_031569127.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 34352 36007 . + . ID=gene-CCO35_RS00155;Name=CCO35_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00155;old_locus_tag=CCO35_00155 NZ_NPME01000001.1 Protein Homology CDS 34352 36007 . + 0 ID=cds-WP_001081945.1;Parent=gene-CCO35_RS00155;Dbxref=GenBank:WP_001081945.1;Name=WP_001081945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=CCO35_RS00155;product=glucan biosynthesis protein D;protein_id=WP_001081945.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 36203 36778 . + . ID=gene-CCO35_RS00160;Name=CCO35_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00160;old_locus_tag=CCO35_00160 NZ_NPME01000001.1 Protein Homology CDS 36203 36778 . + 0 ID=cds-WP_001024319.1;Parent=gene-CCO35_RS00160;Dbxref=GenBank:WP_001024319.1;Name=WP_001024319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=CCO35_RS00160;product=YceI family protein;protein_id=WP_001024319.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 36790 37992 . + . ID=gene-CCO35_RS00165;Name=CCO35_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00165;old_locus_tag=CCO35_00165 NZ_NPME01000001.1 Protein Homology CDS 36790 37992 . + 0 ID=cds-WP_000848083.1;Parent=gene-CCO35_RS00165;Dbxref=GenBank:WP_000848083.1;Name=WP_000848083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=CCO35_RS00165;product=lactate oxidase;protein_id=WP_000848083.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 38039 38476 . - . ID=gene-CCO35_RS00170;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=CCO35_RS00170;old_locus_tag=CCO35_00170 NZ_NPME01000001.1 Protein Homology CDS 38039 38476 . - 0 ID=cds-WP_000354599.1;Parent=gene-CCO35_RS00170;Dbxref=GenBank:WP_000354599.1;Name=WP_000354599.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=CCO35_RS00170;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_000354599.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 38476 39267 . - . ID=gene-CCO35_RS00175;Name=CCO35_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00175;old_locus_tag=CCO35_00175 NZ_NPME01000001.1 Protein Homology CDS 38476 39267 . - 0 ID=cds-WP_023197658.1;Parent=gene-CCO35_RS00175;Dbxref=GenBank:WP_023197658.1;Name=WP_023197658.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=CCO35_RS00175;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_023197658.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 39283 39915 . - . ID=gene-CCO35_RS00180;Name=CCO35_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00180;old_locus_tag=CCO35_00180 NZ_NPME01000001.1 Protein Homology CDS 39283 39915 . - 0 ID=cds-WP_000600603.1;Parent=gene-CCO35_RS00180;Dbxref=GenBank:WP_000600603.1;Name=WP_000600603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=CCO35_RS00180;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600603.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 39927 40364 . - . ID=gene-CCO35_RS00185;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=CCO35_RS00185;old_locus_tag=CCO35_00185 NZ_NPME01000001.1 Protein Homology CDS 39927 40364 . - 0 ID=cds-WP_000606456.1;Parent=gene-CCO35_RS00185;Dbxref=GenBank:WP_000606456.1;Name=WP_000606456.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=CCO35_RS00185;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606456.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 40496 41302 . - . ID=gene-CCO35_RS00190;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=CCO35_RS00190;old_locus_tag=CCO35_00190 NZ_NPME01000001.1 Protein Homology CDS 40496 41302 . - 0 ID=cds-WP_000118616.1;Parent=gene-CCO35_RS00190;Dbxref=GenBank:WP_000118616.1;Name=WP_000118616.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=CCO35_RS00190;product=BtpA family protein SgcQ;protein_id=WP_000118616.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 41316 42629 . - . ID=gene-CCO35_RS00195;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=CCO35_RS00195;old_locus_tag=CCO35_00195 NZ_NPME01000001.1 Protein Homology CDS 41316 42629 . - 0 ID=cds-WP_000460835.1;Parent=gene-CCO35_RS00195;Dbxref=GenBank:WP_000460835.1;Name=WP_000460835.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=CCO35_RS00195;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_000460835.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 42640 42921 . - . ID=gene-CCO35_RS00200;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=CCO35_RS00200;old_locus_tag=CCO35_00200 NZ_NPME01000001.1 Protein Homology CDS 42640 42921 . - 0 ID=cds-WP_000976132.1;Parent=gene-CCO35_RS00200;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=CCO35_RS00200;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 42918 44036 . - . ID=gene-CCO35_RS00205;Name=CCO35_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00205;old_locus_tag=CCO35_00205 NZ_NPME01000001.1 Protein Homology CDS 42918 44036 . - 0 ID=cds-WP_000144624.1;Parent=gene-CCO35_RS00205;Dbxref=GenBank:WP_000144624.1;Name=WP_000144624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=CCO35_RS00205;product=M42 family metallopeptidase;protein_id=WP_000144624.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 44253 44792 . + . ID=gene-CCO35_RS00210;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=CCO35_RS00210;old_locus_tag=CCO35_00210 NZ_NPME01000001.1 Protein Homology CDS 44253 44792 . + 0 ID=cds-WP_000229299.1;Parent=gene-CCO35_RS00210;Dbxref=GenBank:WP_000229299.1;Name=WP_000229299.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=CCO35_RS00210;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229299.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 44789 45769 . - . ID=gene-CCO35_RS00215;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=CCO35_RS00215;old_locus_tag=CCO35_00215 NZ_NPME01000001.1 Protein Homology CDS 44789 45769 . - 0 ID=cds-WP_031569112.1;Parent=gene-CCO35_RS00215;Dbxref=GenBank:WP_031569112.1;Name=WP_031569112.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=CCO35_RS00215;product=YdcK family protein;protein_id=WP_031569112.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 45876 46889 . + . ID=gene-CCO35_RS00220;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=CCO35_RS00220;old_locus_tag=CCO35_00220 NZ_NPME01000001.1 Protein Homology CDS 45876 46889 . + 0 ID=cds-WP_001243996.1;Parent=gene-CCO35_RS00220;Dbxref=GenBank:WP_001243996.1;Name=WP_001243996.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=CCO35_RS00220;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001243996.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 46876 47472 . + . ID=gene-CCO35_RS00225;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=CCO35_RS00225;old_locus_tag=CCO35_00225 NZ_NPME01000001.1 Protein Homology CDS 46876 47472 . + 0 ID=cds-WP_000218279.1;Parent=gene-CCO35_RS00225;Dbxref=GenBank:WP_000218279.1;Name=WP_000218279.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=CCO35_RS00225;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218279.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 47628 48296 . + . ID=gene-CCO35_RS00230;Name=CCO35_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00230;old_locus_tag=CCO35_00230 NZ_NPME01000001.1 Protein Homology CDS 47628 48296 . + 0 ID=cds-WP_001259021.1;Parent=gene-CCO35_RS00230;Dbxref=GenBank:WP_001259021.1;Name=WP_001259021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=CCO35_RS00230;product=DUF3313 domain-containing protein;protein_id=WP_001259021.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 48350 49528 . - . ID=gene-CCO35_RS00235;Name=CCO35_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00235;old_locus_tag=CCO35_00235 NZ_NPME01000001.1 Protein Homology CDS 48350 49528 . - 0 ID=cds-WP_001238500.1;Parent=gene-CCO35_RS00235;Dbxref=GenBank:WP_001238500.1;Name=WP_001238500.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=CCO35_RS00235;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_001238500.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 49620 50156 . + . ID=gene-CCO35_RS00240;Name=CCO35_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00240;old_locus_tag=CCO35_00240 NZ_NPME01000001.1 Protein Homology CDS 49620 50156 . + 0 ID=cds-WP_031569106.1;Parent=gene-CCO35_RS00240;Dbxref=GenBank:WP_031569106.1;Name=WP_031569106.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=CCO35_RS00240;product=helix-turn-helix domain-containing protein;protein_id=WP_031569106.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 50235 52199 . + . ID=gene-CCO35_RS00245;Name=CCO35_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00245;old_locus_tag=CCO35_00245 NZ_NPME01000001.1 Protein Homology CDS 50235 52199 . + 0 ID=cds-WP_001249765.1;Parent=gene-CCO35_RS00245;Dbxref=GenBank:WP_001249765.1;Name=WP_001249765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=CCO35_RS00245;product=peptidase U32 family protein;protein_id=WP_001249765.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 52200 52430 . - . ID=gene-CCO35_RS00250;Name=CCO35_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00250;old_locus_tag=CCO35_00250 NZ_NPME01000001.1 Protein Homology CDS 52200 52430 . - 0 ID=cds-WP_000956438.1;Parent=gene-CCO35_RS00250;Dbxref=GenBank:WP_000956438.1;Name=WP_000956438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=CCO35_RS00250;product=DUF2554 family protein;protein_id=WP_000956438.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 52703 53653 . - . ID=gene-CCO35_RS00255;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=CCO35_RS00255;old_locus_tag=CCO35_00255 NZ_NPME01000001.1 Protein Homology CDS 52703 53653 . - 0 ID=cds-WP_001122939.1;Parent=gene-CCO35_RS00255;Dbxref=GenBank:WP_001122939.1;Name=WP_001122939.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=CCO35_RS00255;product=SPI-2 type III secretion system effector SifB;protein_id=WP_001122939.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 54169 54567 . + . ID=gene-CCO35_RS00260;Name=CCO35_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00260;old_locus_tag=CCO35_00260 NZ_NPME01000001.1 Protein Homology CDS 54169 54567 . + 0 ID=cds-WP_000747901.1;Parent=gene-CCO35_RS00260;Dbxref=GenBank:WP_000747901.1;Name=WP_000747901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=CCO35_RS00260;product=hypothetical protein;protein_id=WP_000747901.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 54600 54831 . + . ID=gene-CCO35_RS00265;Name=CCO35_RS00265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS00265;old_locus_tag=CCO35_00265;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 54600 54831 . + 0 ID=cds-CCO35_RS00265;Parent=gene-CCO35_RS00265;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=CCO35_RS00265;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 55091 55861 . + . ID=gene-CCO35_RS00270;Name=CCO35_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00270;old_locus_tag=CCO35_00270 NZ_NPME01000001.1 Protein Homology CDS 55091 55861 . + 0 ID=cds-WP_000237708.1;Parent=gene-CCO35_RS00270;Dbxref=GenBank:WP_000237708.1;Name=WP_000237708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=CCO35_RS00270;product=M15 family metallopeptidase;protein_id=WP_000237708.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 55997 57421 . + . ID=gene-CCO35_RS00275;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=CCO35_RS00275;old_locus_tag=CCO35_00275 NZ_NPME01000001.1 Protein Homology CDS 55997 57421 . + 0 ID=cds-WP_000760688.1;Parent=gene-CCO35_RS00275;Dbxref=GenBank:WP_000760688.1;Name=WP_000760688.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=CCO35_RS00275;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760688.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 57536 58981 . + . ID=gene-CCO35_RS00280;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=CCO35_RS00280;old_locus_tag=CCO35_00280 NZ_NPME01000001.1 Protein Homology CDS 57536 58981 . + 0 ID=cds-WP_094965298.1;Parent=gene-CCO35_RS00280;Dbxref=GenBank:WP_094965298.1;Name=WP_094965298.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=CCO35_RS00280;product=aminobutyraldehyde dehydrogenase;protein_id=WP_094965298.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 59086 59181 . - . ID=gene-CCO35_RS00285;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=CCO35_RS00285;old_locus_tag=CCO35_00285 NZ_NPME01000001.1 Protein Homology CDS 59086 59181 . - 0 ID=cds-WP_001103198.1;Parent=gene-CCO35_RS00285;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=CCO35_RS00285;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 59380 59553 . + . ID=gene-CCO35_RS00290;Name=CCO35_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00290;old_locus_tag=CCO35_00290 NZ_NPME01000001.1 Protein Homology CDS 59380 59553 . + 0 ID=cds-WP_000171943.1;Parent=gene-CCO35_RS00290;Dbxref=GenBank:WP_000171943.1;Name=WP_000171943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=CCO35_RS00290;product=GhoT/OrtT family toxin;protein_id=WP_000171943.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 59598 61742 . - . ID=gene-CCO35_RS00295;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=CCO35_RS00295;old_locus_tag=CCO35_00295 NZ_NPME01000001.1 Protein Homology CDS 59598 61742 . - 0 ID=cds-WP_000165641.1;Parent=gene-CCO35_RS00295;Dbxref=GenBank:WP_000165641.1;Name=WP_000165641.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=CCO35_RS00295;product=virulence-associated effector SrfC;protein_id=WP_000165641.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 61739 64720 . - . ID=gene-CCO35_RS00300;Name=CCO35_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00300;old_locus_tag=CCO35_00300 NZ_NPME01000001.1 Protein Homology CDS 61739 64720 . - 0 ID=cds-WP_000960830.1;Parent=gene-CCO35_RS00300;Dbxref=GenBank:WP_000960830.1;Name=WP_000960830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=CCO35_RS00300;product=virulence factor SrfB;protein_id=WP_000960830.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 64725 66050 . - . ID=gene-CCO35_RS00305;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=CCO35_RS00305;old_locus_tag=CCO35_00305 NZ_NPME01000001.1 Protein Homology CDS 64725 66050 . - 0 ID=cds-WP_001129947.1;Parent=gene-CCO35_RS00305;Dbxref=GenBank:WP_001129947.1;Name=WP_001129947.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=CCO35_RS00305;product=virulence-associated effector SrfA;protein_id=WP_001129947.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 66274 66507 . + . ID=gene-CCO35_RS00310;Name=CCO35_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00310;old_locus_tag=CCO35_00310 NZ_NPME01000001.1 Protein Homology CDS 66274 66507 . + 0 ID=cds-WP_000018720.1;Parent=gene-CCO35_RS00310;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=CCO35_RS00310;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 66512 66961 . - . ID=gene-CCO35_RS00315;Name=CCO35_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00315;old_locus_tag=CCO35_00315 NZ_NPME01000001.1 Protein Homology CDS 66512 66961 . - 0 ID=cds-WP_001076565.1;Parent=gene-CCO35_RS00315;Dbxref=GenBank:WP_001076565.1;Name=WP_001076565.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=CCO35_RS00315;product=DMT family transporter;protein_id=WP_001076565.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 66961 67476 . - . ID=gene-CCO35_RS00320;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=CCO35_RS00320;old_locus_tag=CCO35_00320 NZ_NPME01000001.1 Protein Homology CDS 66961 67476 . - 0 ID=cds-WP_094965299.1;Parent=gene-CCO35_RS00320;Dbxref=GenBank:WP_094965299.1;Name=WP_094965299.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=CCO35_RS00320;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_094965299.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 67687 68724 . + . ID=gene-CCO35_RS00325;Name=CCO35_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00325;old_locus_tag=CCO35_00325 NZ_NPME01000001.1 Protein Homology CDS 67687 68724 . + 0 ID=cds-WP_094965300.1;Parent=gene-CCO35_RS00325;Dbxref=GenBank:WP_094965300.1;Name=WP_094965300.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=CCO35_RS00325;product=NADP-dependent oxidoreductase;protein_id=WP_094965300.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 69058 69723 . + . ID=gene-CCO35_RS00330;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=CCO35_RS00330;old_locus_tag=CCO35_00330 NZ_NPME01000001.1 Protein Homology CDS 69058 69723 . + 0 ID=cds-WP_001119592.1;Parent=gene-CCO35_RS00330;Dbxref=GenBank:WP_001119592.1;Name=WP_001119592.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=CCO35_RS00330;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001119592.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 69790 71910 . - . ID=gene-CCO35_RS00335;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=CCO35_RS00335;old_locus_tag=CCO35_00335 NZ_NPME01000001.1 Protein Homology CDS 69790 71910 . - 0 ID=cds-WP_000692031.1;Parent=gene-CCO35_RS00335;Dbxref=GenBank:WP_000692031.1;Name=WP_000692031.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=CCO35_RS00335;product=TonB-dependent receptor PqqU;protein_id=WP_000692031.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 72174 73235 . + . ID=gene-CCO35_RS00340;Name=CCO35_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00340;old_locus_tag=CCO35_00340 NZ_NPME01000001.1 Protein Homology CDS 72174 73235 . + 0 ID=cds-WP_000550636.1;Parent=gene-CCO35_RS00340;Dbxref=GenBank:WP_000550636.1;Name=WP_000550636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=CCO35_RS00340;product=YncE family protein;protein_id=WP_000550636.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 73380 73601 . + . ID=gene-CCO35_RS00345;Name=CCO35_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00345;old_locus_tag=CCO35_00345 NZ_NPME01000001.1 Protein Homology CDS 73380 73601 . + 0 ID=cds-WP_000825228.1;Parent=gene-CCO35_RS00345;Dbxref=GenBank:WP_000825228.1;Name=WP_000825228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=CCO35_RS00345;product=YgdI/YgdR family lipoprotein;protein_id=WP_000825228.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 73678 75171 . - . ID=gene-CCO35_RS00350;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=CCO35_RS00350;old_locus_tag=CCO35_00350 NZ_NPME01000001.1 Protein Homology CDS 73678 75171 . - 0 ID=cds-WP_000857112.1;Parent=gene-CCO35_RS00350;Dbxref=GenBank:WP_000857112.1;Name=WP_000857112.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=CCO35_RS00350;product=L-asparagine permease;protein_id=WP_000857112.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 75684 76316 . + . ID=gene-CCO35_RS00360;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=CCO35_RS00360;old_locus_tag=CCO35_00360 NZ_NPME01000001.1 Protein Homology CDS 75684 76316 . + 0 ID=cds-WP_001120862.1;Parent=gene-CCO35_RS00360;Dbxref=GenBank:WP_001120862.1;Name=WP_001120862.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=CCO35_RS00360;product=type III secretion system effector SteA;protein_id=WP_001120862.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 76600 77445 . + . ID=gene-CCO35_RS00365;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=CCO35_RS00365;old_locus_tag=CCO35_00365 NZ_NPME01000001.1 Protein Homology CDS 76600 77445 . + 0 ID=cds-WP_079900468.1;Parent=gene-CCO35_RS00365;Dbxref=GenBank:WP_079900468.1;Name=WP_079900468.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=CCO35_RS00365;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_079900468.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 77481 78374 . - . ID=gene-CCO35_RS00370;Name=CCO35_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00370;old_locus_tag=CCO35_00370 NZ_NPME01000001.1 Protein Homology CDS 77481 78374 . - 0 ID=cds-WP_000804301.1;Parent=gene-CCO35_RS00370;Dbxref=GenBank:WP_000804301.1;Name=WP_000804301.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=CCO35_RS00370;product=PhzF family isomerase;protein_id=WP_000804301.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 78480 79160 . - . ID=gene-CCO35_RS00375;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO35_RS00375;old_locus_tag=CCO35_00375 NZ_NPME01000001.1 Protein Homology CDS 78480 79160 . - 0 ID=cds-WP_000617106.1;Parent=gene-CCO35_RS00375;Dbxref=GenBank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=CCO35_RS00375;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 79157 79852 . - . ID=gene-CCO35_RS00380;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=CCO35_RS00380;old_locus_tag=CCO35_00380 NZ_NPME01000001.1 Protein Homology CDS 79157 79852 . - 0 ID=cds-WP_001166293.1;Parent=gene-CCO35_RS00380;Dbxref=GenBank:WP_001166293.1;Name=WP_001166293.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=CCO35_RS00380;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166293.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 79852 81396 . - . ID=gene-CCO35_RS00385;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO35_RS00385;old_locus_tag=CCO35_00385 NZ_NPME01000001.1 Protein Homology CDS 79852 81396 . - 0 ID=cds-WP_000702582.1;Parent=gene-CCO35_RS00385;Dbxref=GenBank:WP_000702582.1;Name=WP_000702582.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=CCO35_RS00385;product=nitrate reductase subunit beta;protein_id=WP_000702582.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 81393 85133 . - . ID=gene-CCO35_RS00390;Name=CCO35_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00390;old_locus_tag=CCO35_00390 NZ_NPME01000001.1 Protein Homology CDS 81393 85133 . - 0 ID=cds-WP_031569073.1;Parent=gene-CCO35_RS00390;Dbxref=GenBank:WP_031569073.1;Name=WP_031569073.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=CCO35_RS00390;product=nitrate reductase subunit alpha;protein_id=WP_031569073.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 85225 86613 . - . ID=gene-CCO35_RS00395;Name=CCO35_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00395;old_locus_tag=CCO35_00395 NZ_NPME01000001.1 Protein Homology CDS 85225 86613 . - 0 ID=cds-WP_000198255.1;Parent=gene-CCO35_RS00395;Dbxref=GenBank:WP_000198255.1;Name=WP_000198255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=CCO35_RS00395;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_000198255.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 86827 87405 . - . ID=gene-CCO35_RS00400;Name=CCO35_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00400;old_locus_tag=CCO35_00400 NZ_NPME01000001.1 Protein Homology CDS 86827 87405 . - 0 ID=cds-WP_000121049.1;Parent=gene-CCO35_RS00400;Dbxref=GenBank:WP_000121049.1;Name=WP_000121049.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=CCO35_RS00400;product=TetR family transcriptional regulator;protein_id=WP_000121049.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 87523 89010 . + . ID=gene-CCO35_RS00405;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=CCO35_RS00405;old_locus_tag=CCO35_00405 NZ_NPME01000001.1 Protein Homology CDS 87523 89010 . + 0 ID=cds-WP_000489731.1;Parent=gene-CCO35_RS00405;Dbxref=GenBank:WP_000489731.1;Name=WP_000489731.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=CCO35_RS00405;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489731.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 89035 89415 . - . ID=gene-CCO35_RS00410;Name=CCO35_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00410;old_locus_tag=CCO35_00410 NZ_NPME01000001.1 Protein Homology CDS 89035 89415 . - 0 ID=cds-WP_014343841.1;Parent=gene-CCO35_RS00410;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=CCO35_RS00410;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 89559 90647 . - . ID=gene-CCO35_RS00415;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=CCO35_RS00415;old_locus_tag=CCO35_00415 NZ_NPME01000001.1 Protein Homology CDS 89559 90647 . - 0 ID=cds-WP_000769035.1;Parent=gene-CCO35_RS00415;Dbxref=GenBank:WP_000769035.1;Name=WP_000769035.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=CCO35_RS00415;product=porin OmpD;protein_id=WP_000769035.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 91173 92054 . - . ID=gene-CCO35_RS00425;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=CCO35_RS00425;old_locus_tag=CCO35_00425 NZ_NPME01000001.1 Protein Homology CDS 91173 92054 . - 0 ID=cds-WP_000203795.1;Parent=gene-CCO35_RS00425;Dbxref=GenBank:WP_000203795.1;Name=WP_000203795.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=CCO35_RS00425;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000203795.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 92332 95379 . + . ID=gene-CCO35_RS00435;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO35_RS00435;old_locus_tag=CCO35_00435 NZ_NPME01000001.1 Protein Homology CDS 92332 95379 . + 0 ID=cds-WP_077908602.1;Parent=gene-CCO35_RS00435;Dbxref=GenBank:WP_077908602.1;Name=WP_077908602.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=CCO35_RS00435;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077908602.1;transl_except=(pos:92917..92919%2Caa:Sec);transl_table=11 NZ_NPME01000001.1 RefSeq gene 95393 96277 . + . ID=gene-CCO35_RS00440;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO35_RS00440;old_locus_tag=CCO35_00440 NZ_NPME01000001.1 Protein Homology CDS 95393 96277 . + 0 ID=cds-WP_000061599.1;Parent=gene-CCO35_RS00440;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=CCO35_RS00440;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 96270 96926 . + . ID=gene-CCO35_RS00445;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=CCO35_RS00445;old_locus_tag=CCO35_00445 NZ_NPME01000001.1 Protein Homology CDS 96270 96926 . + 0 ID=cds-WP_000045657.1;Parent=gene-CCO35_RS00445;Dbxref=GenBank:WP_000045657.1;Name=WP_000045657.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=CCO35_RS00445;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045657.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 97017 98027 . - . ID=gene-CCO35_RS00450;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=CCO35_RS00450;old_locus_tag=CCO35_00450 NZ_NPME01000001.1 Protein Homology CDS 97017 98027 . - 0 ID=cds-WP_000642447.1;Parent=gene-CCO35_RS00450;Dbxref=GenBank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=CCO35_RS00450;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 98308 100005 . - . ID=gene-CCO35_RS00455;Name=CCO35_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00455;old_locus_tag=CCO35_00455 NZ_NPME01000001.1 Protein Homology CDS 98308 100005 . - 0 ID=cds-WP_000450509.1;Parent=gene-CCO35_RS00455;Dbxref=GenBank:WP_000450509.1;Name=WP_000450509.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=CCO35_RS00455;product=NAD-dependent malic enzyme;protein_id=WP_000450509.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 100182 100325 . - . ID=gene-CCO35_RS00460;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=CCO35_RS00460;old_locus_tag=CCO35_00460 NZ_NPME01000001.1 Protein Homology CDS 100182 100325 . - 0 ID=cds-WP_000841559.1;Parent=gene-CCO35_RS00460;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=CCO35_RS00460;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 100420 100635 . - . ID=gene-CCO35_RS00465;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=CCO35_RS00465;old_locus_tag=CCO35_00465 NZ_NPME01000001.1 Protein Homology CDS 100420 100635 . - 0 ID=cds-WP_000495700.1;Parent=gene-CCO35_RS00465;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=CCO35_RS00465;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 101147 101578 . + . ID=gene-CCO35_RS00470;Name=CCO35_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00470;old_locus_tag=CCO35_00470 NZ_NPME01000001.1 Protein Homology CDS 101147 101578 . + 0 ID=cds-WP_000152297.1;Parent=gene-CCO35_RS00470;Dbxref=GenBank:WP_000152297.1;Name=WP_000152297.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=CCO35_RS00470;product=OsmC family protein;protein_id=WP_000152297.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 101699 102610 . - . ID=gene-CCO35_RS00475;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=CCO35_RS00475;old_locus_tag=CCO35_00475 NZ_NPME01000001.1 Protein Homology CDS 101699 102610 . - 0 ID=cds-WP_001545517.1;Parent=gene-CCO35_RS00475;Dbxref=GenBank:WP_001545517.1;Name=WP_001545517.1;gbkey=CDS;gene=hlyE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=CCO35_RS00475;product=hemolysin HlyE;protein_id=WP_001545517.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 102745 103380 . - . ID=gene-CCO35_RS00480;Name=CCO35_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00480;old_locus_tag=CCO35_00480 NZ_NPME01000001.1 Protein Homology CDS 102745 103380 . - 0 ID=cds-WP_000778346.1;Parent=gene-CCO35_RS00480;Dbxref=GenBank:WP_000778346.1;Name=WP_000778346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778346.1;locus_tag=CCO35_RS00480;product=hypothetical protein;protein_id=WP_000778346.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 103681 103913 . + . ID=gene-CCO35_RS24220;Name=CCO35_RS24220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24220;old_locus_tag=CCO35_00485;partial=true;pseudo=true;start_range=.,103681 NZ_NPME01000001.1 Protein Homology CDS 103681 103913 . + 0 ID=cds-CCO35_RS24220;Parent=gene-CCO35_RS24220;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008484340.1;locus_tag=CCO35_RS24220;partial=true;product=efflux RND transporter permease subunit;pseudo=true;start_range=.,103681;transl_table=11 NZ_NPME01000001.1 RefSeq gene 104148 104477 . + . ID=gene-CCO35_RS00490;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=CCO35_RS00490;old_locus_tag=CCO35_00490 NZ_NPME01000001.1 Protein Homology CDS 104148 104477 . + 0 ID=cds-WP_001032161.1;Parent=gene-CCO35_RS00490;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=CCO35_RS00490;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 104620 105405 . + . ID=gene-CCO35_RS00495;Name=CCO35_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00495;old_locus_tag=CCO35_00495 NZ_NPME01000001.1 Protein Homology CDS 104620 105405 . + 0 ID=cds-WP_000698596.1;Parent=gene-CCO35_RS00495;Dbxref=GenBank:WP_000698596.1;Name=WP_000698596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=CCO35_RS00495;product=OBAP family protein;protein_id=WP_000698596.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 105534 107318 . + . ID=gene-CCO35_RS00500;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=CCO35_RS00500;old_locus_tag=CCO35_00500 NZ_NPME01000001.1 Protein Homology CDS 105534 107318 . + 0 ID=cds-WP_000095551.1;Parent=gene-CCO35_RS00500;Dbxref=GenBank:WP_000095551.1;Name=WP_000095551.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=CCO35_RS00500;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_000095551.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 107315 109843 . + . ID=gene-CCO35_RS00505;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=CCO35_RS00505;old_locus_tag=CCO35_00505 NZ_NPME01000001.1 Protein Homology CDS 107315 109843 . + 0 ID=cds-WP_031569046.1;Parent=gene-CCO35_RS00505;Dbxref=GenBank:WP_031569046.1;Name=WP_031569046.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=CCO35_RS00505;product=malto-oligosyltrehalose synthase;protein_id=WP_031569046.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 109900 111975 . + . ID=gene-CCO35_RS00510;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO35_RS00510;old_locus_tag=CCO35_00510 NZ_NPME01000001.1 Protein Homology CDS 109900 111975 . + 0 ID=cds-WP_001527713.1;Parent=gene-CCO35_RS00510;Dbxref=GenBank:WP_001527713.1;Name=WP_001527713.1;Ontology_term=GO:0005980,GO:0004133,GO:0004553;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=CCO35_RS00510;product=glycogen debranching protein GlgX;protein_id=WP_001527713.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 112089 113291 . - . ID=gene-CCO35_RS00515;Name=CCO35_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00515;old_locus_tag=CCO35_00515 NZ_NPME01000001.1 Protein Homology CDS 112089 113291 . - 0 ID=cds-WP_000347155.1;Parent=gene-CCO35_RS00515;Dbxref=GenBank:WP_000347155.1;Name=WP_000347155.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=CCO35_RS00515;product=MalY/PatB family protein;protein_id=WP_000347155.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 113304 114755 . - . ID=gene-CCO35_RS00520;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CCO35_RS00520;old_locus_tag=CCO35_00520 NZ_NPME01000001.1 Protein Homology CDS 113304 114755 . - 0 ID=cds-WP_001276630.1;Parent=gene-CCO35_RS00520;Dbxref=GenBank:WP_001276630.1;Name=WP_001276630.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=CCO35_RS00520;product=Na+/H+ antiporter NhaC;protein_id=WP_001276630.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 114899 115906 . - . ID=gene-CCO35_RS00525;Name=CCO35_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00525;old_locus_tag=CCO35_00525 NZ_NPME01000001.1 Protein Homology CDS 114899 115906 . - 0 ID=cds-WP_000201082.1;Parent=gene-CCO35_RS00525;Dbxref=GenBank:WP_000201082.1;Name=WP_000201082.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=CCO35_RS00525;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000201082.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 116163 117629 . + . ID=gene-CCO35_RS00530;Name=CCO35_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00530;old_locus_tag=CCO35_00530 NZ_NPME01000001.1 Protein Homology CDS 116163 117629 . + 0 ID=cds-WP_000987832.1;Parent=gene-CCO35_RS00530;Dbxref=GenBank:WP_000987832.1;Name=WP_000987832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=CCO35_RS00530;product=hypothetical protein;protein_id=WP_000987832.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 117882 118862 . - . ID=gene-CCO35_RS00535;Name=CCO35_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00535;old_locus_tag=CCO35_00535 NZ_NPME01000001.1 Protein Homology CDS 117882 118862 . - 0 ID=cds-WP_000876807.1;Parent=gene-CCO35_RS00535;Dbxref=GenBank:WP_000876807.1;Name=WP_000876807.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441349.1;locus_tag=CCO35_RS00535;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_000876807.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 119036 119944 . - . ID=gene-CCO35_RS00540;Name=CCO35_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00540;old_locus_tag=CCO35_00540 NZ_NPME01000001.1 Protein Homology CDS 119036 119944 . - 0 ID=cds-WP_001176637.1;Parent=gene-CCO35_RS00540;Dbxref=GenBank:WP_001176637.1;Name=WP_001176637.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=CCO35_RS00540;product=LysR family transcriptional regulator;protein_id=WP_001176637.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 120356 120526 . + . ID=gene-CCO35_RS00545;Name=CCO35_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00545;old_locus_tag=CCO35_00545 NZ_NPME01000001.1 Protein Homology CDS 120356 120526 . + 0 ID=cds-WP_000415762.1;Parent=gene-CCO35_RS00545;Dbxref=GenBank:WP_000415762.1;Name=WP_000415762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000415762.1;locus_tag=CCO35_RS00545;product=DUF29 family protein;protein_id=WP_000415762.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 120802 121134 . - . ID=gene-CCO35_RS00560;Name=CCO35_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00560;old_locus_tag=CCO35_00560 NZ_NPME01000001.1 Protein Homology CDS 120802 121134 . - 0 ID=cds-WP_000253078.1;Parent=gene-CCO35_RS00560;Dbxref=GenBank:WP_000253078.1;Name=WP_000253078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=CCO35_RS00560;product=DUF1493 family protein;protein_id=WP_000253078.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 121128 121226 . - . ID=gene-CCO35_RS24250;Name=CCO35_RS24250;end_range=121226,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24250;partial=true;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 121128 121226 . - 0 ID=cds-CCO35_RS24250;Parent=gene-CCO35_RS24250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=121226,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_090138499.1;locus_tag=CCO35_RS24250;partial=true;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 121220 121339 . - . ID=gene-CCO35_RS23545;Name=CCO35_RS23545;end_range=121339,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23545;partial=true;pseudo=true;start_range=.,121220 NZ_NPME01000001.1 Protein Homology CDS 121220 121339 . - 0 ID=cds-CCO35_RS23545;Parent=gene-CCO35_RS23545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=121339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388363.1;locus_tag=CCO35_RS23545;partial=true;product=type II and III secretion system;pseudo=true;start_range=.,121220;transl_table=11 NZ_NPME01000001.1 RefSeq gene 121491 121739 . + . ID=gene-CCO35_RS00570;Name=CCO35_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00570;old_locus_tag=CCO35_00570 NZ_NPME01000001.1 Protein Homology CDS 121491 121739 . + 0 ID=cds-WP_000885424.1;Parent=gene-CCO35_RS00570;Dbxref=GenBank:WP_000885424.1;Name=WP_000885424.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=CCO35_RS00570;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885424.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 121729 122013 . + . ID=gene-CCO35_RS00575;Name=CCO35_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00575;old_locus_tag=CCO35_00575 NZ_NPME01000001.1 Protein Homology CDS 121729 122013 . + 0 ID=cds-WP_000221344.1;Parent=gene-CCO35_RS00575;Dbxref=GenBank:WP_000221344.1;Name=WP_000221344.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=CCO35_RS00575;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000221344.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 122185 122574 . + . ID=gene-CCO35_RS00580;Name=CCO35_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00580;old_locus_tag=CCO35_00580 NZ_NPME01000001.1 Protein Homology CDS 122185 122574 . + 0 ID=cds-WP_000194089.1;Parent=gene-CCO35_RS00580;Dbxref=GenBank:WP_000194089.1;Name=WP_000194089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=CCO35_RS00580;product=RidA family protein;protein_id=WP_000194089.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 122632 123705 . - . ID=gene-CCO35_RS00585;Name=CCO35_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00585;old_locus_tag=CCO35_00585 NZ_NPME01000001.1 Protein Homology CDS 122632 123705 . - 0 ID=cds-WP_094965301.1;Parent=gene-CCO35_RS00585;Dbxref=GenBank:WP_094965301.1;Name=WP_094965301.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527732.1;locus_tag=CCO35_RS00585;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_094965301.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 123898 124386 . - . ID=gene-CCO35_RS00590;Name=CCO35_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00590;old_locus_tag=CCO35_00590 NZ_NPME01000001.1 Protein Homology CDS 123898 124386 . - 0 ID=cds-WP_001293634.1;Parent=gene-CCO35_RS00590;Dbxref=GenBank:WP_001293634.1;Name=WP_001293634.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=CCO35_RS00590;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293634.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 124431 125939 . + . ID=gene-CCO35_RS00595;Name=CCO35_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00595;old_locus_tag=CCO35_00595 NZ_NPME01000001.1 Protein Homology CDS 124431 125939 . + 0 ID=cds-WP_000199405.1;Parent=gene-CCO35_RS00595;Dbxref=GenBank:WP_000199405.1;Name=WP_000199405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=CCO35_RS00595;product=FAD-dependent oxidoreductase;protein_id=WP_000199405.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 125929 127170 . + . ID=gene-CCO35_RS00600;Name=CCO35_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00600;old_locus_tag=CCO35_00600 NZ_NPME01000001.1 Protein Homology CDS 125929 127170 . + 0 ID=cds-WP_001095723.1;Parent=gene-CCO35_RS00600;Dbxref=GenBank:WP_001095723.1;Name=WP_001095723.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=CCO35_RS00600;product=MFS transporter;protein_id=WP_001095723.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 127240 128796 . + . ID=gene-CCO35_RS00605;Name=CCO35_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00605;old_locus_tag=CCO35_00605 NZ_NPME01000001.1 Protein Homology CDS 127240 128796 . + 0 ID=cds-WP_000476908.1;Parent=gene-CCO35_RS00605;Dbxref=GenBank:WP_000476908.1;Name=WP_000476908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=CCO35_RS00605;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_000476908.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 128973 130259 . + . ID=gene-CCO35_RS00610;Name=CCO35_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00610;old_locus_tag=CCO35_00610 NZ_NPME01000001.1 Protein Homology CDS 128973 130259 . + 0 ID=cds-WP_031569034.1;Parent=gene-CCO35_RS00610;Dbxref=GenBank:WP_031569034.1;Name=WP_031569034.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=CCO35_RS00610;product=MFS transporter;protein_id=WP_031569034.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 130234 131259 . + . ID=gene-CCO35_RS00615;Name=CCO35_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00615;old_locus_tag=CCO35_00615 NZ_NPME01000001.1 Protein Homology CDS 130234 131259 . + 0 ID=cds-WP_000864934.1;Parent=gene-CCO35_RS00615;Dbxref=GenBank:WP_000864934.1;Name=WP_000864934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=CCO35_RS00615;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864934.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 131318 132109 . - . ID=gene-CCO35_RS00620;Name=CCO35_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00620;old_locus_tag=CCO35_00620 NZ_NPME01000001.1 Protein Homology CDS 131318 132109 . - 0 ID=cds-WP_000450398.1;Parent=gene-CCO35_RS00620;Dbxref=GenBank:WP_000450398.1;Name=WP_000450398.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=CCO35_RS00620;product=FadR/GntR family transcriptional regulator;protein_id=WP_000450398.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 132155 133246 . - . ID=gene-CCO35_RS00625;Name=CCO35_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00625;old_locus_tag=CCO35_00625 NZ_NPME01000001.1 Protein Homology CDS 132155 133246 . - 0 ID=cds-WP_000976505.1;Parent=gene-CCO35_RS00625;Dbxref=GenBank:WP_000976505.1;Name=WP_000976505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=CCO35_RS00625;product=choloylglycine hydrolase family protein;protein_id=WP_000976505.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 133674 134777 . + . ID=gene-CCO35_RS00630;Name=CCO35_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00630;old_locus_tag=CCO35_00630 NZ_NPME01000001.1 Protein Homology CDS 133674 134777 . + 0 ID=cds-WP_001194448.1;Parent=gene-CCO35_RS00630;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=CCO35_RS00630;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 134780 136582 . + . ID=gene-CCO35_RS00635;Name=CCO35_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00635;old_locus_tag=CCO35_00635 NZ_NPME01000001.1 Protein Homology CDS 134780 136582 . + 0 ID=cds-WP_000331201.1;Parent=gene-CCO35_RS00635;Dbxref=GenBank:WP_000331201.1;Name=WP_000331201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=CCO35_RS00635;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331201.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 136533 137276 . + . ID=gene-CCO35_RS00640;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=CCO35_RS00640;old_locus_tag=CCO35_00640 NZ_NPME01000001.1 Protein Homology CDS 136533 137276 . + 0 ID=cds-WP_000924455.1;Parent=gene-CCO35_RS00640;Dbxref=GenBank:WP_000924455.1;Name=WP_000924455.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=CCO35_RS00640;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924455.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 137282 137890 . + . ID=gene-CCO35_RS00645;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=CCO35_RS00645;old_locus_tag=CCO35_00645 NZ_NPME01000001.1 Protein Homology CDS 137282 137890 . + 0 ID=cds-WP_000852663.1;Parent=gene-CCO35_RS00645;Dbxref=GenBank:WP_000852663.1;Name=WP_000852663.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=CCO35_RS00645;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852663.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 137890 138189 . + . ID=gene-CCO35_RS00650;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO35_RS00650;old_locus_tag=CCO35_00650 NZ_NPME01000001.1 Protein Homology CDS 137890 138189 . + 0 ID=cds-WP_000334915.1;Parent=gene-CCO35_RS00650;Dbxref=GenBank:WP_000334915.1;Name=WP_000334915.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=CCO35_RS00650;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334915.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 138186 138596 . + . ID=gene-CCO35_RS00655;Name=CCO35_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00655;old_locus_tag=CCO35_00655 NZ_NPME01000001.1 Protein Homology CDS 138186 138596 . + 0 ID=cds-WP_000155991.1;Parent=gene-CCO35_RS00655;Dbxref=GenBank:WP_000155991.1;Name=WP_000155991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=CCO35_RS00655;product=hydrogenase;protein_id=WP_000155991.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 138614 139675 . + . ID=gene-CCO35_RS00660;Name=CCO35_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00660;old_locus_tag=CCO35_00660 NZ_NPME01000001.1 Protein Homology CDS 138614 139675 . + 0 ID=cds-WP_001016740.1;Parent=gene-CCO35_RS00660;Dbxref=GenBank:WP_001016740.1;Name=WP_001016740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=CCO35_RS00660;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_001016740.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 139663 140550 . + . ID=gene-CCO35_RS00665;Name=CCO35_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00665;old_locus_tag=CCO35_00665 NZ_NPME01000001.1 Protein Homology CDS 139663 140550 . + 0 ID=cds-WP_001189397.1;Parent=gene-CCO35_RS00665;Dbxref=GenBank:WP_001189397.1;Name=WP_001189397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=CCO35_RS00665;product=hypothetical protein;protein_id=WP_001189397.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 140563 140904 . + . ID=gene-CCO35_RS00670;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO35_RS00670;old_locus_tag=CCO35_00670 NZ_NPME01000001.1 Protein Homology CDS 140563 140904 . + 0 ID=cds-WP_000544772.1;Parent=gene-CCO35_RS00670;Dbxref=GenBank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=CCO35_RS00670;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 141045 142163 . - . ID=gene-CCO35_RS00675;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=CCO35_RS00675;old_locus_tag=CCO35_00675 NZ_NPME01000001.1 Protein Homology CDS 141045 142163 . - 0 ID=cds-WP_000758335.1;Parent=gene-CCO35_RS00675;Dbxref=GenBank:WP_000758335.1;Name=WP_000758335.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=CCO35_RS00675;product=porin OmpC;protein_id=WP_000758335.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 142880 143422 . + . ID=gene-CCO35_RS00680;Name=CCO35_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00680;old_locus_tag=CCO35_00680 NZ_NPME01000001.1 Protein Homology CDS 142880 143422 . + 0 ID=cds-WP_000513130.1;Parent=gene-CCO35_RS00680;Dbxref=GenBank:WP_000513130.1;Name=WP_000513130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=CCO35_RS00680;product=YybH family protein;protein_id=WP_000513130.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 143478 144392 . - . ID=gene-CCO35_RS00685;Name=CCO35_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00685;old_locus_tag=CCO35_00685 NZ_NPME01000001.1 Protein Homology CDS 143478 144392 . - 0 ID=cds-WP_170909375.1;Parent=gene-CCO35_RS00685;Dbxref=GenBank:WP_170909375.1;Name=WP_170909375.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=CCO35_RS00685;product=bestrophin family protein;protein_id=WP_170909375.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 144649 145008 . - . ID=gene-CCO35_RS00690;Name=CCO35_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00690;old_locus_tag=CCO35_00690 NZ_NPME01000001.1 Protein Homology CDS 144649 145008 . - 0 ID=cds-WP_000992447.1;Parent=gene-CCO35_RS00690;Dbxref=GenBank:WP_000992447.1;Name=WP_000992447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=CCO35_RS00690;product=DUF4186 domain-containing protein;protein_id=WP_000992447.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 145008 145934 . - . ID=gene-CCO35_RS00695;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=CCO35_RS00695;old_locus_tag=CCO35_00695 NZ_NPME01000001.1 Protein Homology CDS 145008 145934 . - 0 ID=cds-WP_000090081.1;Parent=gene-CCO35_RS00695;Dbxref=GenBank:WP_000090081.1;Name=WP_000090081.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=CCO35_RS00695;product=glutaminase B;protein_id=WP_000090081.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 146007 147395 . - . ID=gene-CCO35_RS00700;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=CCO35_RS00700;old_locus_tag=CCO35_00700 NZ_NPME01000001.1 Protein Homology CDS 146007 147395 . - 0 ID=cds-WP_000178411.1;Parent=gene-CCO35_RS00700;Dbxref=GenBank:WP_000178411.1;Name=WP_000178411.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=CCO35_RS00700;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000178411.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 147498 148370 . + . ID=gene-CCO35_RS00705;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=CCO35_RS00705;old_locus_tag=CCO35_00705 NZ_NPME01000001.1 Protein Homology CDS 147498 148370 . + 0 ID=cds-WP_000366539.1;Parent=gene-CCO35_RS00705;Dbxref=GenBank:WP_000366539.1;Name=WP_000366539.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=CCO35_RS00705;product=putrescine utilization regulator PtrR;protein_id=WP_000366539.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 148486 149676 . + . ID=gene-CCO35_RS00710;Name=CCO35_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00710;old_locus_tag=CCO35_00710 NZ_NPME01000001.1 Protein Homology CDS 148486 149676 . + 0 ID=cds-WP_000154621.1;Parent=gene-CCO35_RS00710;Dbxref=GenBank:WP_000154621.1;Name=WP_000154621.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=CCO35_RS00710;product=sugar transporter;protein_id=WP_000154621.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 149723 150388 . - . ID=gene-CCO35_RS00715;Name=CCO35_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00715;old_locus_tag=CCO35_00715 NZ_NPME01000001.1 Protein Homology CDS 149723 150388 . - 0 ID=cds-WP_000968968.1;Parent=gene-CCO35_RS00715;Dbxref=GenBank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=CCO35_RS00715;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 150647 151081 . + . ID=gene-CCO35_RS00720;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=CCO35_RS00720;old_locus_tag=CCO35_00720 NZ_NPME01000001.1 Protein Homology CDS 150647 151081 . + 0 ID=cds-WP_000843435.1;Parent=gene-CCO35_RS00720;Dbxref=GenBank:WP_000843435.1;Name=WP_000843435.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=CCO35_RS00720;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843435.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 151101 151484 . + . ID=gene-CCO35_RS00725;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=CCO35_RS00725;old_locus_tag=CCO35_00725 NZ_NPME01000001.1 Protein Homology CDS 151101 151484 . + 0 ID=cds-WP_000091194.1;Parent=gene-CCO35_RS00725;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=CCO35_RS00725;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 151513 151728 . + . ID=gene-CCO35_RS00730;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=CCO35_RS00730;old_locus_tag=CCO35_00730 NZ_NPME01000001.1 Protein Homology CDS 151513 151728 . + 0 ID=cds-WP_000783049.1;Parent=gene-CCO35_RS00730;Dbxref=GenBank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=CCO35_RS00730;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 151847 152749 . - . ID=gene-CCO35_RS00735;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=CCO35_RS00735;old_locus_tag=CCO35_00735 NZ_NPME01000001.1 Protein Homology CDS 151847 152749 . - 0 ID=cds-WP_000987753.1;Parent=gene-CCO35_RS00735;Dbxref=GenBank:WP_000987753.1;Name=WP_000987753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=CCO35_RS00735;product=O-acetylserine/cysteine exporter;protein_id=WP_000987753.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 152977 154164 . + . ID=gene-CCO35_RS00740;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=CCO35_RS00740;old_locus_tag=CCO35_00740 NZ_NPME01000001.1 Protein Homology CDS 152977 154164 . + 0 ID=cds-WP_031568996.1;Parent=gene-CCO35_RS00740;Dbxref=GenBank:WP_031568996.1;Name=WP_031568996.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=CCO35_RS00740;product=efflux MFS transporter YdeE;protein_id=WP_031568996.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 154412 154507 . + . ID=gene-CCO35_RS00745;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=CCO35_RS00745;old_locus_tag=CCO35_00745 NZ_NPME01000001.1 Protein Homology CDS 154412 154507 . + 0 ID=cds-WP_000901531.1;Parent=gene-CCO35_RS00745;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=CCO35_RS00745;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 154856 155248 . - . ID=gene-CCO35_RS00750;Name=CCO35_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00750;old_locus_tag=CCO35_00750 NZ_NPME01000001.1 Protein Homology CDS 154856 155248 . - 0 ID=cds-WP_000775494.1;Parent=gene-CCO35_RS00750;Dbxref=GenBank:WP_000775494.1;Name=WP_000775494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=CCO35_RS00750;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000775494.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 155675 156202 . + . ID=gene-CCO35_RS00755;Name=CCO35_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00755;old_locus_tag=CCO35_00755 NZ_NPME01000001.1 Protein Homology CDS 155675 156202 . + 0 ID=cds-WP_001235359.1;Parent=gene-CCO35_RS00755;Dbxref=GenBank:WP_001235359.1;Name=WP_001235359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=CCO35_RS00755;product=2-oxo-tetronate isomerase;protein_id=WP_001235359.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 156322 156504 . - . ID=gene-CCO35_RS00760;Name=CCO35_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00760;old_locus_tag=CCO35_00760 NZ_NPME01000001.1 Protein Homology CDS 156322 156504 . - 0 ID=cds-WP_000807642.1;Parent=gene-CCO35_RS00760;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=CCO35_RS00760;product=general stress protein;protein_id=WP_000807642.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 156849 158891 . - . ID=gene-CCO35_RS00770;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=CCO35_RS00770;old_locus_tag=CCO35_00770 NZ_NPME01000001.1 Protein Homology CDS 156849 158891 . - 0 ID=cds-WP_000106280.1;Parent=gene-CCO35_RS00770;Dbxref=GenBank:WP_000106280.1;Name=WP_000106280.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=CCO35_RS00770;product=peptidyl-dipeptidase Dcp;protein_id=WP_000106280.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 159030 159776 . + . ID=gene-CCO35_RS00775;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=CCO35_RS00775;old_locus_tag=CCO35_00775 NZ_NPME01000001.1 Protein Homology CDS 159030 159776 . + 0 ID=cds-WP_000636564.1;Parent=gene-CCO35_RS00775;Dbxref=GenBank:WP_000636564.1;Name=WP_000636564.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=CCO35_RS00775;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636564.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 159906 160592 . + . ID=gene-CCO35_RS00780;Name=CCO35_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00780;old_locus_tag=CCO35_00780 NZ_NPME01000001.1 Protein Homology CDS 159906 160592 . + 0 ID=cds-WP_000215562.1;Parent=gene-CCO35_RS00780;Dbxref=GenBank:WP_000215562.1;Name=WP_000215562.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=CCO35_RS00780;product=GntR family transcriptional regulator;protein_id=WP_000215562.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 160774 160977 . + . ID=gene-CCO35_RS00785;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=CCO35_RS00785;old_locus_tag=CCO35_00785 NZ_NPME01000001.1 Protein Homology CDS 160774 160977 . + 0 ID=cds-WP_000989267.1;Parent=gene-CCO35_RS00785;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=CCO35_RS00785;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 161044 162510 . - . ID=gene-CCO35_RS00790;Name=CCO35_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00790;old_locus_tag=CCO35_00790 NZ_NPME01000001.1 Protein Homology CDS 161044 162510 . - 0 ID=cds-WP_031568988.1;Parent=gene-CCO35_RS00790;Dbxref=GenBank:WP_031568988.1;Name=WP_031568988.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=CCO35_RS00790;product=mannitol dehydrogenase family protein;protein_id=WP_031568988.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 162654 164033 . - . ID=gene-CCO35_RS00795;Name=CCO35_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00795;old_locus_tag=CCO35_00795 NZ_NPME01000001.1 Protein Homology CDS 162654 164033 . - 0 ID=cds-WP_000192119.1;Parent=gene-CCO35_RS00795;Dbxref=GenBank:WP_000192119.1;Name=WP_000192119.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=CCO35_RS00795;product=MFS transporter;protein_id=WP_000192119.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 164087 165106 . - . ID=gene-CCO35_RS00800;Name=CCO35_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00800;old_locus_tag=CCO35_00800 NZ_NPME01000001.1 Protein Homology CDS 164087 165106 . - 0 ID=cds-WP_000836501.1;Parent=gene-CCO35_RS00800;Dbxref=GenBank:WP_000836501.1;Name=WP_000836501.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=CCO35_RS00800;product=Zn-dependent oxidoreductase;protein_id=WP_000836501.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 165117 166331 . - . ID=gene-CCO35_RS00805;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=CCO35_RS00805;old_locus_tag=CCO35_00805 NZ_NPME01000001.1 Protein Homology CDS 165117 166331 . - 0 ID=cds-WP_031568983.1;Parent=gene-CCO35_RS00805;Dbxref=GenBank:WP_031568983.1;Name=WP_031568983.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=CCO35_RS00805;product=starvation-sensing protein RspA;protein_id=WP_031568983.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 166453 166779 . - . ID=gene-CCO35_RS00810;Name=CCO35_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00810;old_locus_tag=CCO35_00810 NZ_NPME01000001.1 Protein Homology CDS 166453 166779 . - 0 ID=cds-WP_000921389.1;Parent=gene-CCO35_RS00810;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=CCO35_RS00810;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 166932 167273 . + . ID=gene-CCO35_RS00815;Name=CCO35_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00815;old_locus_tag=CCO35_00815 NZ_NPME01000001.1 Protein Homology CDS 166932 167273 . + 0 ID=cds-WP_023220675.1;Parent=gene-CCO35_RS00815;Dbxref=GenBank:WP_023220675.1;Name=WP_023220675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=CCO35_RS00815;product=DUF1283 family protein;protein_id=WP_023220675.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 167309 167869 . + . ID=gene-CCO35_RS00820;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=CCO35_RS00820;old_locus_tag=CCO35_00820 NZ_NPME01000001.1 Protein Homology CDS 167309 167869 . + 0 ID=cds-WP_000199997.1;Parent=gene-CCO35_RS00820;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=CCO35_RS00820;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 167910 168620 . - . ID=gene-CCO35_RS00825;Name=CCO35_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00825;old_locus_tag=CCO35_00825 NZ_NPME01000001.1 Protein Homology CDS 167910 168620 . - 0 ID=cds-WP_031568972.1;Parent=gene-CCO35_RS00825;Dbxref=GenBank:WP_031568972.1;Name=WP_031568972.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=CCO35_RS00825;product=YnfC family lipoprotein;protein_id=WP_031568972.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 168724 169032 . + . ID=gene-CCO35_RS00830;Name=CCO35_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00830;old_locus_tag=CCO35_00830 NZ_NPME01000001.1 Protein Homology CDS 168724 169032 . + 0 ID=cds-WP_000975516.1;Parent=gene-CCO35_RS00830;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=CCO35_RS00830;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 169189 171627 . + . ID=gene-CCO35_RS00835;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=CCO35_RS00835;old_locus_tag=CCO35_00835 NZ_NPME01000001.1 Protein Homology CDS 169189 171627 . + 0 ID=cds-WP_001117605.1;Parent=gene-CCO35_RS00835;Dbxref=GenBank:WP_001117605.1;Name=WP_001117605.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=CCO35_RS00835;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_001117605.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 171726 174161 . + . ID=gene-CCO35_RS00840;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=CCO35_RS00840;old_locus_tag=CCO35_00840 NZ_NPME01000001.1 Protein Homology CDS 171726 174161 . + 0 ID=cds-WP_020898751.1;Parent=gene-CCO35_RS00840;Dbxref=GenBank:WP_020898751.1;Name=WP_020898751.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=CCO35_RS00840;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_020898751.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 174172 174789 . + . ID=gene-CCO35_RS00845;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=CCO35_RS00845;old_locus_tag=CCO35_00845 NZ_NPME01000001.1 Protein Homology CDS 174172 174789 . + 0 ID=cds-WP_094965302.1;Parent=gene-CCO35_RS00845;Dbxref=GenBank:WP_094965302.1;Name=WP_094965302.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO35_RS00845;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_094965302.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 174791 175648 . + . ID=gene-CCO35_RS00850;Name=CCO35_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00850;old_locus_tag=CCO35_00850 NZ_NPME01000001.1 Protein Homology CDS 174791 175648 . + 0 ID=cds-WP_000534698.1;Parent=gene-CCO35_RS00850;Dbxref=GenBank:WP_000534698.1;Name=WP_000534698.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=CCO35_RS00850;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534698.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 175691 176305 . + . ID=gene-CCO35_RS00855;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=CCO35_RS00855;old_locus_tag=CCO35_00855 NZ_NPME01000001.1 Protein Homology CDS 175691 176305 . + 0 ID=cds-WP_000206565.1;Parent=gene-CCO35_RS00855;Dbxref=GenBank:WP_000206565.1;Name=WP_000206565.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=CCO35_RS00855;product=Tat proofreading chaperone DmsD;protein_id=WP_000206565.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 176610 177320 . + . ID=gene-CCO35_RS00860;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO35_RS00860;old_locus_tag=CCO35_00860 NZ_NPME01000001.1 Protein Homology CDS 176610 177320 . + 0 ID=cds-WP_094965303.1;Parent=gene-CCO35_RS00860;Dbxref=GenBank:WP_094965303.1;Name=WP_094965303.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=CCO35_RS00860;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_094965303.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 177349 178251 . + . ID=gene-CCO35_RS00865;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=CCO35_RS00865;old_locus_tag=CCO35_00865 NZ_NPME01000001.1 Protein Homology CDS 177349 178251 . + 0 ID=cds-WP_001211193.1;Parent=gene-CCO35_RS00865;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=CCO35_RS00865;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 178261 178908 . + . ID=gene-CCO35_RS00870;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=CCO35_RS00870;old_locus_tag=CCO35_00870 NZ_NPME01000001.1 Protein Homology CDS 178261 178908 . + 0 ID=cds-WP_000379677.1;Parent=gene-CCO35_RS00870;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=CCO35_RS00870;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 178908 180056 . + . ID=gene-CCO35_RS00875;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=CCO35_RS00875;old_locus_tag=CCO35_00875 NZ_NPME01000001.1 Protein Homology CDS 178908 180056 . + 0 ID=cds-WP_080097110.1;Parent=gene-CCO35_RS00875;Dbxref=GenBank:WP_080097110.1;Name=WP_080097110.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=CCO35_RS00875;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_080097110.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 180192 181481 . + . ID=gene-CCO35_RS00880;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=CCO35_RS00880;old_locus_tag=CCO35_00880 NZ_NPME01000001.1 Protein Homology CDS 180192 181481 . + 0 ID=cds-WP_000554918.1;Parent=gene-CCO35_RS00880;Dbxref=GenBank:WP_000554918.1;Name=WP_000554918.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=CCO35_RS00880;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_000554918.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 181437 182132 . - . ID=gene-CCO35_RS00885;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO35_RS00885;old_locus_tag=CCO35_00885 NZ_NPME01000001.1 Protein Homology CDS 181437 182132 . - 0 ID=cds-WP_000919206.1;Parent=gene-CCO35_RS00885;Dbxref=GenBank:WP_000919206.1;Name=WP_000919206.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=CCO35_RS00885;product=dethiobiotin synthase;protein_id=WP_000919206.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 182258 183478 . - . ID=gene-CCO35_RS00890;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=CCO35_RS00890;old_locus_tag=CCO35_00890 NZ_NPME01000001.1 Protein Homology CDS 182258 183478 . - 0 ID=cds-WP_000225087.1;Parent=gene-CCO35_RS00890;Dbxref=GenBank:WP_000225087.1;Name=WP_000225087.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=CCO35_RS00890;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225087.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 183606 184505 . - . ID=gene-CCO35_RS00900;Name=CCO35_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00900;old_locus_tag=CCO35_00900 NZ_NPME01000001.1 Protein Homology CDS 183606 184505 . - 0 ID=cds-WP_001019577.1;Parent=gene-CCO35_RS00900;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=CCO35_RS00900;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 184625 185878 . + . ID=gene-CCO35_RS00905;Name=CCO35_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00905;old_locus_tag=CCO35_00905 NZ_NPME01000001.1 Protein Homology CDS 184625 185878 . + 0 ID=cds-WP_023232814.1;Parent=gene-CCO35_RS00905;Dbxref=GenBank:WP_023232814.1;Name=WP_023232814.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=CCO35_RS00905;product=MFS transporter;protein_id=WP_023232814.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 185945 186037 . - . ID=gene-CCO35_RS23890;Name=CCO35_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23890 NZ_NPME01000001.1 Protein Homology CDS 185945 186037 . - 0 ID=cds-WP_001068154.1;Parent=gene-CCO35_RS23890;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=CCO35_RS23890;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 186273 186521 . + . ID=gene-CCO35_RS00910;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=CCO35_RS00910;old_locus_tag=CCO35_00910 NZ_NPME01000001.1 Protein Homology CDS 186273 186521 . + 0 ID=cds-WP_000756317.1;Parent=gene-CCO35_RS00910;Dbxref=GenBank:WP_000756317.1;Name=WP_000756317.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=CCO35_RS00910;product=acid resistance repetitive basic protein Asr;protein_id=WP_000756317.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 186790 187611 . + . ID=gene-CCO35_RS00920;Name=CCO35_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00920;old_locus_tag=CCO35_00920 NZ_NPME01000001.1 Protein Homology CDS 186790 187611 . + 0 ID=cds-WP_000549654.1;Parent=gene-CCO35_RS00920;Dbxref=GenBank:WP_000549654.1;Name=WP_000549654.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=CCO35_RS00920;product=trypsin-like serine peptidase;protein_id=WP_000549654.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 187651 187980 . - . ID=gene-CCO35_RS00925;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=CCO35_RS00925;old_locus_tag=CCO35_00925 NZ_NPME01000001.1 Protein Homology CDS 187651 187980 . - 0 ID=cds-WP_001183821.1;Parent=gene-CCO35_RS00925;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=CCO35_RS00925;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 187967 188329 . - . ID=gene-CCO35_RS00930;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=CCO35_RS00930;old_locus_tag=CCO35_00930 NZ_NPME01000001.1 Protein Homology CDS 187967 188329 . - 0 ID=cds-WP_000500278.1;Parent=gene-CCO35_RS00930;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=CCO35_RS00930;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 188441 188611 . - . ID=gene-CCO35_RS24255;Name=CCO35_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24255;old_locus_tag=CCO35_00935 NZ_NPME01000001.1 Protein Homology CDS 188441 188611 . - 0 ID=cds-WP_001539987.1;Parent=gene-CCO35_RS24255;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=CCO35_RS24255;product=hypothetical protein;protein_id=WP_001539987.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 188747 189781 . + . ID=gene-CCO35_RS00940;Name=CCO35_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00940;old_locus_tag=CCO35_00940 NZ_NPME01000001.1 Protein Homology CDS 188747 189781 . + 0 ID=cds-WP_001118268.1;Parent=gene-CCO35_RS00940;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=CCO35_RS00940;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 189956 191344 . - . ID=gene-CCO35_RS00945;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=CCO35_RS00945;old_locus_tag=CCO35_00945 NZ_NPME01000001.1 Protein Homology CDS 189956 191344 . - 0 ID=cds-WP_000014056.1;Parent=gene-CCO35_RS00945;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=CCO35_RS00945;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 191355 192884 . - . ID=gene-CCO35_RS00950;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=CCO35_RS00950;old_locus_tag=CCO35_00950 NZ_NPME01000001.1 Protein Homology CDS 191355 192884 . - 0 ID=cds-WP_001219360.1;Parent=gene-CCO35_RS00950;Dbxref=GenBank:WP_001219360.1;Name=WP_001219360.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=CCO35_RS00950;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219360.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 193411 194355 . + . ID=gene-CCO35_RS00955;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=CCO35_RS00955;old_locus_tag=CCO35_00955 NZ_NPME01000001.1 Protein Homology CDS 193411 194355 . + 0 ID=cds-WP_000769292.1;Parent=gene-CCO35_RS00955;Dbxref=GenBank:WP_000769292.1;Name=WP_000769292.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=CCO35_RS00955;product=DUF1471 family protein YdgH;protein_id=WP_000769292.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 194653 196035 . + . ID=gene-CCO35_RS00960;Name=CCO35_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00960;old_locus_tag=CCO35_00960 NZ_NPME01000001.1 Protein Homology CDS 194653 196035 . + 0 ID=cds-WP_000412353.1;Parent=gene-CCO35_RS00960;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=CCO35_RS00960;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 196097 196432 . - . ID=gene-CCO35_RS00965;Name=CCO35_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00965;old_locus_tag=CCO35_00965 NZ_NPME01000001.1 Protein Homology CDS 196097 196432 . - 0 ID=cds-WP_000524877.1;Parent=gene-CCO35_RS00965;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=CCO35_RS00965;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 196559 197290 . + . ID=gene-CCO35_RS00970;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=CCO35_RS00970;old_locus_tag=CCO35_00970 NZ_NPME01000001.1 Protein Homology CDS 196559 197290 . + 0 ID=cds-WP_001080048.1;Parent=gene-CCO35_RS00970;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=CCO35_RS00970;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 197769 198911 . + . ID=gene-CCO35_RS00985;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=CCO35_RS00985;old_locus_tag=CCO35_00985 NZ_NPME01000001.1 Protein Homology CDS 197769 198911 . + 0 ID=cds-WP_000824337.1;Parent=gene-CCO35_RS00985;Dbxref=GenBank:WP_000824337.1;Name=WP_000824337.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=CCO35_RS00985;product=porin OmpC;protein_id=WP_000824337.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 199064 200770 . + . ID=gene-CCO35_RS00990;Name=CCO35_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS00990;old_locus_tag=CCO35_00990 NZ_NPME01000001.1 Protein Homology CDS 199064 200770 . + 0 ID=cds-WP_077911099.1;Parent=gene-CCO35_RS00990;Dbxref=GenBank:WP_077911099.1;Name=WP_077911099.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=CCO35_RS00990;product=amidohydrolase;protein_id=WP_077911099.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 200881 202182 . + . ID=gene-CCO35_RS00995;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=CCO35_RS00995;old_locus_tag=CCO35_00995 NZ_NPME01000001.1 Protein Homology CDS 200881 202182 . + 0 ID=cds-WP_000732940.1;Parent=gene-CCO35_RS00995;Dbxref=GenBank:WP_000732940.1;Name=WP_000732940.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=CCO35_RS00995;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732940.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 202258 203187 . + . ID=gene-CCO35_RS01000;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=CCO35_RS01000;old_locus_tag=CCO35_01000 NZ_NPME01000001.1 Protein Homology CDS 202258 203187 . + 0 ID=cds-WP_001611779.1;Parent=gene-CCO35_RS01000;Dbxref=GenBank:WP_001611779.1;Name=WP_001611779.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=CCO35_RS01000;product=DNA replication terminus site-binding protein;protein_id=WP_001611779.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 203184 204587 . - . ID=gene-CCO35_RS01005;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CCO35_RS01005;old_locus_tag=CCO35_01005 NZ_NPME01000001.1 Protein Homology CDS 203184 204587 . - 0 ID=cds-WP_000259117.1;Parent=gene-CCO35_RS01005;Dbxref=GenBank:WP_000259117.1;Name=WP_000259117.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=CCO35_RS01005;product=class II fumarate hydratase;protein_id=WP_000259117.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 204755 206401 . - . ID=gene-CCO35_RS01010;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=CCO35_RS01010;old_locus_tag=CCO35_01010 NZ_NPME01000001.1 Protein Homology CDS 204755 206401 . - 0 ID=cds-WP_000066609.1;Parent=gene-CCO35_RS01010;Dbxref=GenBank:WP_000066609.1;Name=WP_000066609.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=CCO35_RS01010;product=class I fumarate hydratase;protein_id=WP_000066609.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 206601 207776 . + . ID=gene-CCO35_RS01015;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CCO35_RS01015;old_locus_tag=CCO35_01015 NZ_NPME01000001.1 Protein Homology CDS 206601 207776 . + 0 ID=cds-WP_001170625.1;Parent=gene-CCO35_RS01015;Dbxref=GenBank:WP_001170625.1;Name=WP_001170625.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=CCO35_RS01015;product=mannose-6-phosphate isomerase;protein_id=WP_001170625.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 207879 209387 . + . ID=gene-CCO35_RS01020;Name=CCO35_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01020;old_locus_tag=CCO35_01020 NZ_NPME01000001.1 Protein Homology CDS 207879 209387 . + 0 ID=cds-WP_000753334.1;Parent=gene-CCO35_RS01020;Dbxref=GenBank:WP_000753334.1;Name=WP_000753334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=CCO35_RS01020;product=YdgA family protein;protein_id=WP_000753334.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 209445 210473 . - . ID=gene-CCO35_RS01025;Name=CCO35_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01025;old_locus_tag=CCO35_01025 NZ_NPME01000001.1 Protein Homology CDS 209445 210473 . - 0 ID=cds-WP_000951919.1;Parent=gene-CCO35_RS01025;Dbxref=GenBank:WP_000951919.1;Name=WP_000951919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=CCO35_RS01025;product=Mal regulon transcriptional regulator MalI;protein_id=WP_000951919.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 210646 212238 . + . ID=gene-CCO35_RS01030;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=CCO35_RS01030;old_locus_tag=CCO35_01030 NZ_NPME01000001.1 Protein Homology CDS 210646 212238 . + 0 ID=cds-WP_000208903.1;Parent=gene-CCO35_RS01030;Dbxref=GenBank:WP_000208903.1;Name=WP_000208903.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=malX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=CCO35_RS01030;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_000208903.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 212248 213420 . + . ID=gene-CCO35_RS01035;Name=CCO35_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01035;old_locus_tag=CCO35_01035 NZ_NPME01000001.1 Protein Homology CDS 212248 213420 . + 0 ID=cds-WP_023220686.1;Parent=gene-CCO35_RS01035;Dbxref=GenBank:WP_023220686.1;Name=WP_023220686.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=CCO35_RS01035;product=MalY/PatB family protein;protein_id=WP_023220686.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 213634 214635 . + . ID=gene-CCO35_RS01040;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CCO35_RS01040;old_locus_tag=CCO35_01040 NZ_NPME01000001.1 Protein Homology CDS 213634 214635 . + 0 ID=cds-WP_000565564.1;Parent=gene-CCO35_RS01040;Dbxref=GenBank:WP_000565564.1;Name=WP_000565564.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=CCO35_RS01040;product=adenosine deaminase;protein_id=WP_000565564.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 214710 215750 . - . ID=gene-CCO35_RS01045;Name=CCO35_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01045;old_locus_tag=CCO35_01045 NZ_NPME01000001.1 Protein Homology CDS 214710 215750 . - 0 ID=cds-WP_000998241.1;Parent=gene-CCO35_RS01045;Dbxref=GenBank:WP_000998241.1;Name=WP_000998241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=CCO35_RS01045;product=oxidoreductase;protein_id=WP_000998241.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 215958 216083 . + . ID=gene-CCO35_RS01050;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=CCO35_RS01050;old_locus_tag=CCO35_01050 NZ_NPME01000001.1 Protein Homology CDS 215958 216083 . + 0 ID=cds-WP_001708800.1;Parent=gene-CCO35_RS01050;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=CCO35_RS01050;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 216380 216595 . + . ID=gene-CCO35_RS01055;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=CCO35_RS01055;old_locus_tag=CCO35_01055 NZ_NPME01000001.1 Protein Homology CDS 216380 216595 . + 0 ID=cds-WP_000217946.1;Parent=gene-CCO35_RS01055;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=CCO35_RS01055;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 216684 217124 . + . ID=gene-CCO35_RS01060;Name=CCO35_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01060;old_locus_tag=CCO35_01060 NZ_NPME01000001.1 Protein Homology CDS 216684 217124 . + 0 ID=cds-WP_000214061.1;Parent=gene-CCO35_RS01060;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=CCO35_RS01060;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 217201 217782 . + . ID=gene-CCO35_RS01065;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=CCO35_RS01065;old_locus_tag=CCO35_01065 NZ_NPME01000001.1 Protein Homology CDS 217201 217782 . + 0 ID=cds-WP_000133179.1;Parent=gene-CCO35_RS01065;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=CCO35_RS01065;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 217782 218360 . + . ID=gene-CCO35_RS01070;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=CCO35_RS01070;old_locus_tag=CCO35_01070 NZ_NPME01000001.1 Protein Homology CDS 217782 218360 . + 0 ID=cds-WP_001092600.1;Parent=gene-CCO35_RS01070;Dbxref=GenBank:WP_001092600.1;Name=WP_001092600.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=CCO35_RS01070;product=electron transport complex subunit RsxB;protein_id=WP_001092600.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 218353 220467 . + . ID=gene-CCO35_RS01075;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=CCO35_RS01075;old_locus_tag=CCO35_01075 NZ_NPME01000001.1 Protein Homology CDS 218353 220467 . + 0 ID=cds-WP_080211923.1;Parent=gene-CCO35_RS01075;Dbxref=GenBank:WP_080211923.1;Name=WP_080211923.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=CCO35_RS01075;product=electron transport complex subunit RsxC;protein_id=WP_080211923.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 220468 221526 . + . ID=gene-CCO35_RS01080;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=CCO35_RS01080;old_locus_tag=CCO35_01080 NZ_NPME01000001.1 Protein Homology CDS 220468 221526 . + 0 ID=cds-WP_000231889.1;Parent=gene-CCO35_RS01080;Dbxref=GenBank:WP_000231889.1;Name=WP_000231889.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=CCO35_RS01080;product=electron transport complex subunit RsxD;protein_id=WP_000231889.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 221530 222150 . + . ID=gene-CCO35_RS01085;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=CCO35_RS01085;old_locus_tag=CCO35_01085 NZ_NPME01000001.1 Protein Homology CDS 221530 222150 . + 0 ID=cds-WP_000920822.1;Parent=gene-CCO35_RS01085;Dbxref=GenBank:WP_000920822.1;Name=WP_000920822.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=CCO35_RS01085;product=electron transport complex subunit RsxG;protein_id=WP_000920822.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 222153 222845 . + . ID=gene-CCO35_RS01090;Name=CCO35_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01090;old_locus_tag=CCO35_01090 NZ_NPME01000001.1 Protein Homology CDS 222153 222845 . + 0 ID=cds-WP_001289628.1;Parent=gene-CCO35_RS01090;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=CCO35_RS01090;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 222845 223480 . + . ID=gene-CCO35_RS01095;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CCO35_RS01095;old_locus_tag=CCO35_01095 NZ_NPME01000001.1 Protein Homology CDS 222845 223480 . + 0 ID=cds-WP_031566092.1;Parent=gene-CCO35_RS01095;Dbxref=GenBank:WP_031566092.1;Name=WP_031566092.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=CCO35_RS01095;product=endonuclease III;protein_id=WP_031566092.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 224082 225587 . + . ID=gene-CCO35_RS01100;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=CCO35_RS01100;old_locus_tag=CCO35_01100 NZ_NPME01000001.1 Protein Homology CDS 224082 225587 . + 0 ID=cds-WP_000100909.1;Parent=gene-CCO35_RS01100;Dbxref=GenBank:WP_000100909.1;Name=WP_000100909.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=CCO35_RS01100;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100909.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 225692 226297 . + . ID=gene-CCO35_RS01105;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=CCO35_RS01105;old_locus_tag=CCO35_01105 NZ_NPME01000001.1 Protein Homology CDS 225692 226297 . + 0 ID=cds-WP_000765727.1;Parent=gene-CCO35_RS01105;Dbxref=GenBank:WP_000765727.1;Name=WP_000765727.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=CCO35_RS01105;product=glutathione transferase GstA;protein_id=WP_000765727.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 226356 227216 . - . ID=gene-CCO35_RS01110;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=CCO35_RS01110;old_locus_tag=CCO35_01110 NZ_NPME01000001.1 Protein Homology CDS 226356 227216 . - 0 ID=cds-WP_000789740.1;Parent=gene-CCO35_RS01110;Dbxref=GenBank:WP_000789740.1;Name=WP_000789740.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=CCO35_RS01110;product=pyridoxal kinase PdxY;protein_id=WP_000789740.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 227276 228550 . - . ID=gene-CCO35_RS01115;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CCO35_RS01115;old_locus_tag=CCO35_01115 NZ_NPME01000001.1 Protein Homology CDS 227276 228550 . - 0 ID=cds-WP_000168626.1;Parent=gene-CCO35_RS01115;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=CCO35_RS01115;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 228677 229333 . - . ID=gene-CCO35_RS01120;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=CCO35_RS01120;old_locus_tag=CCO35_01120 NZ_NPME01000001.1 Protein Homology CDS 228677 229333 . - 0 ID=cds-WP_001282334.1;Parent=gene-CCO35_RS01120;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=CCO35_RS01120;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 229392 229721 . - . ID=gene-CCO35_RS01125;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=CCO35_RS01125;old_locus_tag=CCO35_01125 NZ_NPME01000001.1 Protein Homology CDS 229392 229721 . - 0 ID=cds-WP_001132086.1;Parent=gene-CCO35_RS01125;Dbxref=GenBank:WP_001132086.1;Name=WP_001132086.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=CCO35_RS01125;product=C-type lysozyme inhibitor;protein_id=WP_001132086.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 229809 230930 . - . ID=gene-CCO35_RS01130;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=CCO35_RS01130;old_locus_tag=CCO35_01130 NZ_NPME01000001.1 Protein Homology CDS 229809 230930 . - 0 ID=cds-WP_000835019.1;Parent=gene-CCO35_RS01130;Dbxref=GenBank:WP_000835019.1;Name=WP_000835019.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=CCO35_RS01130;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835019.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 231203 231670 . + . ID=gene-CCO35_RS01135;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=CCO35_RS01135;old_locus_tag=CCO35_01135 NZ_NPME01000001.1 Protein Homology CDS 231203 231670 . + 0 ID=cds-WP_000597179.1;Parent=gene-CCO35_RS01135;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=CCO35_RS01135;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 231718 232158 . - . ID=gene-CCO35_RS01140;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=CCO35_RS01140;old_locus_tag=CCO35_01140 NZ_NPME01000001.1 Protein Homology CDS 231718 232158 . - 0 ID=cds-WP_000764550.1;Parent=gene-CCO35_RS01140;Dbxref=GenBank:WP_000764550.1;Name=WP_000764550.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=CCO35_RS01140;product=transcriptional regulator SlyA;protein_id=WP_000764550.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 232353 232589 . + . ID=gene-CCO35_RS01145;Name=CCO35_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01145;old_locus_tag=CCO35_01145 NZ_NPME01000001.1 Protein Homology CDS 232353 232589 . + 0 ID=cds-WP_000649755.1;Parent=gene-CCO35_RS01145;Dbxref=GenBank:WP_000649755.1;Name=WP_000649755.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=CCO35_RS01145;product=DUF1656 domain-containing protein;protein_id=WP_000649755.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 232592 233452 . + . ID=gene-CCO35_RS01150;Name=CCO35_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01150;old_locus_tag=CCO35_01150 NZ_NPME01000001.1 Protein Homology CDS 232592 233452 . + 0 ID=cds-WP_001527784.1;Parent=gene-CCO35_RS01150;Dbxref=GenBank:WP_001527784.1;Name=WP_001527784.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=CCO35_RS01150;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001527784.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 233452 235491 . + . ID=gene-CCO35_RS01155;Name=CCO35_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01155;old_locus_tag=CCO35_01155 NZ_NPME01000001.1 Protein Homology CDS 233452 235491 . + 0 ID=cds-WP_000777616.1;Parent=gene-CCO35_RS01155;Dbxref=GenBank:WP_000777616.1;Name=WP_000777616.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=CCO35_RS01155;product=FUSC family protein;protein_id=WP_000777616.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 235467 235988 . - . ID=gene-CCO35_RS01160;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=CCO35_RS01160;old_locus_tag=CCO35_01160 NZ_NPME01000001.1 Protein Homology CDS 235467 235988 . - 0 ID=cds-WP_000826820.1;Parent=gene-CCO35_RS01160;Dbxref=GenBank:WP_000826820.1;Name=WP_000826820.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=CCO35_RS01160;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826820.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 236068 236964 . - . ID=gene-CCO35_RS01165;Name=CCO35_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01165;old_locus_tag=CCO35_01165 NZ_NPME01000001.1 Protein Homology CDS 236068 236964 . - 0 ID=cds-WP_000250715.1;Parent=gene-CCO35_RS01165;Dbxref=GenBank:WP_000250715.1;Name=WP_000250715.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=CCO35_RS01165;product=aldo/keto reductase;protein_id=WP_000250715.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 237015 237254 . - . ID=gene-CCO35_RS01170;Name=CCO35_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01170;old_locus_tag=CCO35_01170 NZ_NPME01000001.1 Protein Homology CDS 237015 237254 . - 0 ID=cds-WP_001538148.1;Parent=gene-CCO35_RS01170;Dbxref=GenBank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=CCO35_RS01170;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 237357 237956 . + . ID=gene-CCO35_RS01175;Name=CCO35_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01175;old_locus_tag=CCO35_01175 NZ_NPME01000001.1 Protein Homology CDS 237357 237956 . + 0 ID=cds-WP_001041828.1;Parent=gene-CCO35_RS01175;Dbxref=GenBank:WP_001041828.1;Name=WP_001041828.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=CCO35_RS01175;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041828.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 238015 239112 . + . ID=gene-CCO35_RS01180;Name=CCO35_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01180;old_locus_tag=CCO35_01180 NZ_NPME01000001.1 Protein Homology CDS 238015 239112 . + 0 ID=cds-WP_000092927.1;Parent=gene-CCO35_RS01180;Dbxref=GenBank:WP_000092927.1;Name=WP_000092927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=CCO35_RS01180;product=alkene reductase;protein_id=WP_000092927.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 239181 239588 . + . ID=gene-CCO35_RS01185;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=CCO35_RS01185;old_locus_tag=CCO35_01185 NZ_NPME01000001.1 Protein Homology CDS 239181 239588 . + 0 ID=cds-WP_001237789.1;Parent=gene-CCO35_RS01185;Dbxref=GenBank:WP_001237789.1;Name=WP_001237789.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=CCO35_RS01185;product=lactoylglutathione lyase;protein_id=WP_001237789.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 239689 240336 . + . ID=gene-CCO35_RS01190;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=CCO35_RS01190;old_locus_tag=CCO35_01190 NZ_NPME01000001.1 Protein Homology CDS 239689 240336 . + 0 ID=cds-WP_001282267.1;Parent=gene-CCO35_RS01190;Dbxref=GenBank:WP_001282267.1;Name=WP_001282267.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=CCO35_RS01190;product=ribonuclease T;protein_id=WP_001282267.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 240414 240761 . - . ID=gene-CCO35_RS01195;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=CCO35_RS01195;old_locus_tag=CCO35_01195 NZ_NPME01000001.1 Protein Homology CDS 240414 240761 . - 0 ID=cds-WP_000108176.1;Parent=gene-CCO35_RS01195;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=CCO35_RS01195;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 241097 241918 . + . ID=gene-CCO35_RS01200;Name=CCO35_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01200;old_locus_tag=CCO35_01200 NZ_NPME01000001.1 Protein Homology CDS 241097 241918 . + 0 ID=cds-WP_023223549.1;Parent=gene-CCO35_RS01200;Dbxref=GenBank:WP_023223549.1;Name=WP_023223549.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=CCO35_RS01200;product=C40 family peptidase;protein_id=WP_023223549.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 242045 242626 . + . ID=gene-CCO35_RS01205;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=CCO35_RS01205;old_locus_tag=CCO35_01205 NZ_NPME01000001.1 Protein Homology CDS 242045 242626 . + 0 ID=cds-WP_000007294.1;Parent=gene-CCO35_RS01205;Dbxref=GenBank:WP_000007294.1;Name=WP_000007294.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=CCO35_RS01205;product=superoxide dismutase [Fe];protein_id=WP_000007294.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 242709 242798 . - . ID=gene-CCO35_RS01210;Name=CCO35_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01210;old_locus_tag=CCO35_01210 NZ_NPME01000001.1 Protein Homology CDS 242709 242798 . - 0 ID=cds-WP_000102277.1;Parent=gene-CCO35_RS01210;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=CCO35_RS01210;product=YnhF family membrane protein;protein_id=WP_000102277.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 243094 244119 . + . ID=gene-CCO35_RS01220;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CCO35_RS01220;old_locus_tag=CCO35_01220 NZ_NPME01000001.1 Protein Homology CDS 243094 244119 . + 0 ID=cds-WP_000190993.1;Parent=gene-CCO35_RS01220;Dbxref=GenBank:WP_000190993.1;Name=WP_000190993.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=CCO35_RS01220;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190993.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 244116 245048 . - . ID=gene-CCO35_RS01225;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=CCO35_RS01225;old_locus_tag=CCO35_01225 NZ_NPME01000001.1 Protein Homology CDS 244116 245048 . - 0 ID=cds-WP_000269512.1;Parent=gene-CCO35_RS01225;Dbxref=GenBank:WP_000269512.1;Name=WP_000269512.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=CCO35_RS01225;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269512.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 245161 246366 . + . ID=gene-CCO35_RS01230;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=CCO35_RS01230;old_locus_tag=CCO35_01230 NZ_NPME01000001.1 Protein Homology CDS 245161 246366 . + 0 ID=cds-WP_023213418.1;Parent=gene-CCO35_RS01230;Dbxref=GenBank:WP_023213418.1;Name=WP_023213418.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=CCO35_RS01230;product=purine nucleoside transporter PunC;protein_id=WP_023213418.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 246656 247804 . + . ID=gene-CCO35_RS01235;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=CCO35_RS01235;old_locus_tag=CCO35_01235 NZ_NPME01000001.1 Protein Homology CDS 246656 247804 . + 0 ID=cds-WP_000098879.1;Parent=gene-CCO35_RS01235;Dbxref=GenBank:WP_000098879.1;Name=WP_000098879.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=CCO35_RS01235;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098879.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 247846 248487 . - . ID=gene-CCO35_RS01240;Name=CCO35_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01240;old_locus_tag=CCO35_01240 NZ_NPME01000001.1 Protein Homology CDS 247846 248487 . - 0 ID=cds-WP_000493971.1;Parent=gene-CCO35_RS01240;Dbxref=GenBank:WP_000493971.1;Name=WP_000493971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=CCO35_RS01240;product=riboflavin synthase;protein_id=WP_000493971.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 248704 250077 . + . ID=gene-CCO35_RS01245;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=CCO35_RS01245;old_locus_tag=CCO35_01245 NZ_NPME01000001.1 Protein Homology CDS 248704 250077 . + 0 ID=cds-WP_010835190.1;Parent=gene-CCO35_RS01245;Dbxref=GenBank:WP_010835190.1;Name=WP_010835190.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=CCO35_RS01245;product=multidrug efflux MATE transporter MdtK;protein_id=WP_010835190.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 250229 250305 . + . ID=gene-CCO35_RS01250;Name=CCO35_RS01250;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS01250;old_locus_tag=CCO35_01250 NZ_NPME01000001.1 tRNAscan-SE tRNA 250229 250305 . + . ID=rna-CCO35_RS01250;Parent=gene-CCO35_RS01250;anticodon=(pos:250263..250265);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS01250;product=tRNA-Val NZ_NPME01000001.1 tRNAscan-SE exon 250229 250305 . + . ID=exon-CCO35_RS01250-1;Parent=rna-CCO35_RS01250;anticodon=(pos:250263..250265);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS01250;product=tRNA-Val NZ_NPME01000001.1 RefSeq gene 250316 250392 . + . ID=gene-CCO35_RS01255;Name=CCO35_RS01255;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS01255;old_locus_tag=CCO35_01255 NZ_NPME01000001.1 tRNAscan-SE tRNA 250316 250392 . + . ID=rna-CCO35_RS01255;Parent=gene-CCO35_RS01255;anticodon=(pos:250350..250352);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS01255;product=tRNA-Val NZ_NPME01000001.1 tRNAscan-SE exon 250316 250392 . + . ID=exon-CCO35_RS01255-1;Parent=rna-CCO35_RS01255;anticodon=(pos:250350..250352);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS01255;product=tRNA-Val NZ_NPME01000001.1 RefSeq gene 250562 251620 . - . ID=gene-CCO35_RS01260;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=CCO35_RS01260;old_locus_tag=CCO35_01260 NZ_NPME01000001.1 Protein Homology CDS 250562 251620 . - 0 ID=cds-WP_001291707.1;Parent=gene-CCO35_RS01260;Dbxref=GenBank:WP_001291707.1;Name=WP_001291707.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=CCO35_RS01260;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_001291707.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 251617 252396 . - . ID=gene-CCO35_RS01265;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=CCO35_RS01265;old_locus_tag=CCO35_01265 NZ_NPME01000001.1 Protein Homology CDS 251617 252396 . - 0 ID=cds-WP_000068771.1;Parent=gene-CCO35_RS01265;Dbxref=GenBank:WP_000068771.1;Name=WP_000068771.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=CCO35_RS01265;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_000068771.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 252397 252663 . - . ID=gene-CCO35_RS01270;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=CCO35_RS01270;old_locus_tag=CCO35_01270 NZ_NPME01000001.1 Protein Homology CDS 252397 252663 . - 0 ID=cds-WP_000999982.1;Parent=gene-CCO35_RS01270;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=CCO35_RS01270;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 252660 253307 . - . ID=gene-CCO35_RS01275;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=CCO35_RS01275;old_locus_tag=CCO35_01275 NZ_NPME01000001.1 Protein Homology CDS 252660 253307 . - 0 ID=cds-WP_000056367.1;Parent=gene-CCO35_RS01275;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=CCO35_RS01275;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 253375 254343 . - . ID=gene-CCO35_RS01280;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=CCO35_RS01280;old_locus_tag=CCO35_01280 NZ_NPME01000001.1 Protein Homology CDS 253375 254343 . - 0 ID=cds-WP_000944198.1;Parent=gene-CCO35_RS01280;Dbxref=GenBank:WP_000944198.1;Name=WP_000944198.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=CCO35_RS01280;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_000944198.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 254324 254698 . - . ID=gene-CCO35_RS01285;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=CCO35_RS01285;old_locus_tag=CCO35_01285 NZ_NPME01000001.1 Protein Homology CDS 254324 254698 . - 0 ID=cds-WP_001223304.1;Parent=gene-CCO35_RS01285;Dbxref=GenBank:WP_001223304.1;Name=WP_001223304.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=CCO35_RS01285;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223304.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 254679 255056 . - . ID=gene-CCO35_RS01290;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=CCO35_RS01290;old_locus_tag=CCO35_01290 NZ_NPME01000001.1 Protein Homology CDS 254679 255056 . - 0 ID=cds-WP_000449093.1;Parent=gene-CCO35_RS01290;Dbxref=GenBank:WP_000449093.1;Name=WP_000449093.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=CCO35_RS01290;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449093.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 255059 256360 . - . ID=gene-CCO35_RS01295;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=CCO35_RS01295;old_locus_tag=CCO35_01295 NZ_NPME01000001.1 Protein Homology CDS 255059 256360 . - 0 ID=cds-WP_031565999.1;Parent=gene-CCO35_RS01295;Dbxref=GenBank:WP_031565999.1;Name=WP_031565999.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=CCO35_RS01295;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_031565999.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 256350 258395 . - . ID=gene-CCO35_RS01300;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=CCO35_RS01300;old_locus_tag=CCO35_01300 NZ_NPME01000001.1 Protein Homology CDS 256350 258395 . - 0 ID=cds-WP_001258222.1;Parent=gene-CCO35_RS01300;Dbxref=GenBank:WP_001258222.1;Name=WP_001258222.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=CCO35_RS01300;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_001258222.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 258380 258748 . - . ID=gene-CCO35_RS01305;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=CCO35_RS01305;old_locus_tag=CCO35_01305 NZ_NPME01000001.1 Protein Homology CDS 258380 258748 . - 0 ID=cds-WP_000383700.1;Parent=gene-CCO35_RS01305;Dbxref=GenBank:WP_000383700.1;Name=WP_000383700.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=CCO35_RS01305;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383700.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 258806 259822 . - . ID=gene-CCO35_RS01310;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=CCO35_RS01310;old_locus_tag=CCO35_01310 NZ_NPME01000001.1 Protein Homology CDS 258806 259822 . - 0 ID=cds-WP_000238882.1;Parent=gene-CCO35_RS01310;Dbxref=GenBank:WP_000238882.1;Name=WP_000238882.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=CCO35_RS01310;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_000238882.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 259788 260462 . - . ID=gene-CCO35_RS01315;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=CCO35_RS01315;old_locus_tag=CCO35_01315 NZ_NPME01000001.1 Protein Homology CDS 259788 260462 . - 0 ID=cds-WP_000011206.1;Parent=gene-CCO35_RS01315;Dbxref=GenBank:WP_000011206.1;Name=WP_000011206.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=CCO35_RS01315;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_000011206.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 260459 261007 . - . ID=gene-CCO35_RS01320;Name=CCO35_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01320;old_locus_tag=CCO35_01320 NZ_NPME01000001.1 Protein Homology CDS 260459 261007 . - 0 ID=cds-WP_001531605.1;Parent=gene-CCO35_RS01320;Dbxref=GenBank:WP_001531605.1;Name=WP_001531605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=CCO35_RS01320;product=type III secretion system domain-containing protein;protein_id=WP_001531605.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 261025 261774 . - . ID=gene-CCO35_RS01325;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=CCO35_RS01325;old_locus_tag=CCO35_01325 NZ_NPME01000001.1 Protein Homology CDS 261025 261774 . - 0 ID=cds-WP_000862881.1;Parent=gene-CCO35_RS01325;Dbxref=GenBank:WP_000862881.1;Name=WP_000862881.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=CCO35_RS01325;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_000862881.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 261771 262019 . - . ID=gene-CCO35_RS01330;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=CCO35_RS01330;old_locus_tag=CCO35_01330 NZ_NPME01000001.1 Protein Homology CDS 261771 262019 . - 0 ID=cds-WP_001562742.1;Parent=gene-CCO35_RS01330;Dbxref=GenBank:WP_001562742.1;Name=WP_001562742.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=CCO35_RS01330;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_001562742.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 262031 262321 . - . ID=gene-CCO35_RS01335;Name=CCO35_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01335;old_locus_tag=CCO35_01335 NZ_NPME01000001.1 Protein Homology CDS 262031 262321 . - 0 ID=cds-WP_000444713.1;Parent=gene-CCO35_RS01335;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=CCO35_RS01335;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 262299 262514 . - . ID=gene-CCO35_RS01340;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=CCO35_RS01340;old_locus_tag=CCO35_01340 NZ_NPME01000001.1 Protein Homology CDS 262299 262514 . - 0 ID=cds-WP_000350226.1;Parent=gene-CCO35_RS01340;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=CCO35_RS01340;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 262608 263297 . - . ID=gene-CCO35_RS01345;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=CCO35_RS01345;old_locus_tag=CCO35_01345 NZ_NPME01000001.1 Protein Homology CDS 262608 263297 . - 0 ID=cds-WP_000805849.1;Parent=gene-CCO35_RS01345;Dbxref=GenBank:WP_000805849.1;Name=WP_000805849.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=CCO35_RS01345;product=pathogenicity island 2 effector protein SseG;protein_id=WP_000805849.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 263294 264076 . - . ID=gene-CCO35_RS01350;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=CCO35_RS01350;old_locus_tag=CCO35_01350 NZ_NPME01000001.1 Protein Homology CDS 263294 264076 . - 0 ID=cds-WP_000690713.1;Parent=gene-CCO35_RS01350;Dbxref=GenBank:WP_000690713.1;Name=WP_000690713.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=CCO35_RS01350;product=type III secretion systems effector SseF;protein_id=WP_000690713.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 264092 264526 . - . ID=gene-CCO35_RS01355;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=CCO35_RS01355;old_locus_tag=CCO35_01355 NZ_NPME01000001.1 Protein Homology CDS 264092 264526 . - 0 ID=cds-WP_000979963.1;Parent=gene-CCO35_RS01355;Dbxref=GenBank:WP_000979963.1;Name=WP_000979963.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=CCO35_RS01355;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979963.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 264578 264994 . - . ID=gene-CCO35_RS01360;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=CCO35_RS01360;old_locus_tag=CCO35_01360 NZ_NPME01000001.1 Protein Homology CDS 264578 264994 . - 0 ID=cds-WP_000249602.1;Parent=gene-CCO35_RS01360;Dbxref=GenBank:WP_000249602.1;Name=WP_000249602.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=CCO35_RS01360;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_000249602.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 264997 265584 . - . ID=gene-CCO35_RS01365;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=CCO35_RS01365;old_locus_tag=CCO35_01365 NZ_NPME01000001.1 Protein Homology CDS 264997 265584 . - 0 ID=cds-WP_000388323.1;Parent=gene-CCO35_RS01365;Dbxref=GenBank:WP_000388323.1;Name=WP_000388323.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=CCO35_RS01365;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_000388323.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 265600 267054 . - . ID=gene-CCO35_RS01370;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=CCO35_RS01370;old_locus_tag=CCO35_01370 NZ_NPME01000001.1 Protein Homology CDS 265600 267054 . - 0 ID=cds-WP_001079766.1;Parent=gene-CCO35_RS01370;Dbxref=GenBank:WP_001079766.1;Name=WP_001079766.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=CCO35_RS01370;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WP_001079766.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 267057 267530 . - . ID=gene-CCO35_RS01375;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=CCO35_RS01375;old_locus_tag=CCO35_01375 NZ_NPME01000001.1 Protein Homology CDS 267057 267530 . - 0 ID=cds-WP_000711021.1;Parent=gene-CCO35_RS01375;Dbxref=GenBank:WP_000711021.1;Name=WP_000711021.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=CCO35_RS01375;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_000711021.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 267527 268117 . - . ID=gene-CCO35_RS01380;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO35_RS01380;old_locus_tag=CCO35_01380 NZ_NPME01000001.1 Protein Homology CDS 267527 268117 . - 0 ID=cds-WP_000094428.1;Parent=gene-CCO35_RS01380;Dbxref=GenBank:WP_000094428.1;Name=WP_000094428.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=CCO35_RS01380;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_000094428.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 268124 268450 . - . ID=gene-CCO35_RS01385;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO35_RS01385;old_locus_tag=CCO35_01385 NZ_NPME01000001.1 Protein Homology CDS 268124 268450 . - 0 ID=cds-WP_000972856.1;Parent=gene-CCO35_RS01385;Dbxref=GenBank:WP_000972856.1;Name=WP_000972856.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=CCO35_RS01385;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972856.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 268653 268895 . - . ID=gene-CCO35_RS01395;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=CCO35_RS01395;old_locus_tag=CCO35_01395 NZ_NPME01000001.1 Protein Homology CDS 268653 268895 . - 0 ID=cds-WP_000210202.1;Parent=gene-CCO35_RS01395;Dbxref=GenBank:WP_000210202.1;Name=WP_000210202.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=CCO35_RS01395;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_000210202.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 268903 270114 . - . ID=gene-CCO35_RS01400;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=CCO35_RS01400;old_locus_tag=CCO35_01400 NZ_NPME01000001.1 Protein Homology CDS 268903 270114 . - 0 ID=cds-WP_000323782.1;Parent=gene-CCO35_RS01400;Dbxref=GenBank:WP_000323782.1;Name=WP_000323782.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=CCO35_RS01400;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_000323782.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 270095 271588 . - . ID=gene-CCO35_RS01405;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=CCO35_RS01405;old_locus_tag=CCO35_01405 NZ_NPME01000001.1 Protein Homology CDS 270095 271588 . - 0 ID=cds-WP_000261289.1;Parent=gene-CCO35_RS01405;Dbxref=GenBank:WP_000261289.1;Name=WP_000261289.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=CCO35_RS01405;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261289.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 271590 271991 . - . ID=gene-CCO35_RS01410;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=CCO35_RS01410;old_locus_tag=CCO35_01410 NZ_NPME01000001.1 Protein Homology CDS 271590 271991 . - 0 ID=cds-WP_001562740.1;Parent=gene-CCO35_RS01410;Dbxref=GenBank:WP_001562740.1;Name=WP_001562740.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=CCO35_RS01410;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001562740.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 272392 275154 . + . ID=gene-CCO35_RS01415;Name=CCO35_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01415;old_locus_tag=CCO35_01415 NZ_NPME01000001.1 Protein Homology CDS 272392 275154 . + 0 ID=cds-WP_001050757.1;Parent=gene-CCO35_RS01415;Dbxref=GenBank:WP_001050757.1;Name=WP_001050757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=CCO35_RS01415;product=two component system sensor kinase;protein_id=WP_001050757.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 275185 275823 . + . ID=gene-CCO35_RS01420;Name=CCO35_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01420;old_locus_tag=CCO35_01420 NZ_NPME01000001.1 Protein Homology CDS 275185 275823 . + 0 ID=cds-WP_000666335.1;Parent=gene-CCO35_RS01420;Dbxref=GenBank:WP_000666335.1;Name=WP_000666335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=CCO35_RS01420;product=two component system response regulator;protein_id=WP_000666335.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 276002 276730 . + . ID=gene-CCO35_RS01425;Name=CCO35_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01425;old_locus_tag=CCO35_01425 NZ_NPME01000001.1 Protein Homology CDS 276002 276730 . + 0 ID=cds-WP_000122319.1;Parent=gene-CCO35_RS01425;Dbxref=GenBank:WP_000122319.1;Name=WP_000122319.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=CCO35_RS01425;product=MerR family transcriptional regulator;protein_id=WP_000122319.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 276902 277861 . + . ID=gene-CCO35_RS01430;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=CCO35_RS01430;old_locus_tag=CCO35_01430 NZ_NPME01000001.1 Protein Homology CDS 276902 277861 . + 0 ID=cds-WP_001060725.1;Parent=gene-CCO35_RS01430;Dbxref=GenBank:WP_001060725.1;Name=WP_001060725.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060725.1;locus_tag=CCO35_RS01430;product=transcriptional regulator MlrB;protein_id=WP_001060725.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 277957 278169 . - . ID=gene-CCO35_RS01435;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=CCO35_RS01435;old_locus_tag=CCO35_01435 NZ_NPME01000001.1 Protein Homology CDS 277957 278169 . - 0 ID=cds-WP_000165779.1;Parent=gene-CCO35_RS01435;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=CCO35_RS01435;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 278267 278887 . - . ID=gene-CCO35_RS01440;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=CCO35_RS01440;old_locus_tag=CCO35_01440 NZ_NPME01000001.1 Protein Homology CDS 278267 278887 . - 0 ID=cds-WP_000190926.1;Parent=gene-CCO35_RS01440;Dbxref=GenBank:WP_000190926.1;Name=WP_000190926.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=CCO35_RS01440;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190926.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 278862 280640 . - . ID=gene-CCO35_RS01445;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=CCO35_RS01445;old_locus_tag=CCO35_01445 NZ_NPME01000001.1 Protein Homology CDS 278862 280640 . - 0 ID=cds-WP_001214416.1;Parent=gene-CCO35_RS01445;Dbxref=GenBank:WP_001214416.1;Name=WP_001214416.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=CCO35_RS01445;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_001214416.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 280822 281556 . + . ID=gene-CCO35_RS01450;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=CCO35_RS01450;old_locus_tag=CCO35_01450 NZ_NPME01000001.1 Protein Homology CDS 280822 281556 . + 0 ID=cds-WP_023216615.1;Parent=gene-CCO35_RS01450;Dbxref=GenBank:WP_023216615.1;Name=WP_023216615.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=CCO35_RS01450;product=tetrathionate reductase subunit TtrB;protein_id=WP_023216615.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 281557 282579 . + . ID=gene-CCO35_RS01455;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=CCO35_RS01455;old_locus_tag=CCO35_01455 NZ_NPME01000001.1 Protein Homology CDS 281557 282579 . + 0 ID=cds-WP_000149764.1;Parent=gene-CCO35_RS01455;Dbxref=GenBank:WP_000149764.1;Name=WP_000149764.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=CCO35_RS01455;product=tetrathionate reductase subunit TtrC;protein_id=WP_000149764.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 282572 285634 . + . ID=gene-CCO35_RS01460;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=CCO35_RS01460;old_locus_tag=CCO35_01460 NZ_NPME01000001.1 Protein Homology CDS 282572 285634 . + 0 ID=cds-WP_031565954.1;Parent=gene-CCO35_RS01460;Dbxref=GenBank:WP_031565954.1;Name=WP_031565954.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=CCO35_RS01460;product=tetrathionate reductase subunit TtrA;protein_id=WP_031565954.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 285957 287183 . + . ID=gene-CCO35_RS01465;Name=CCO35_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01465;old_locus_tag=CCO35_01465 NZ_NPME01000001.1 Protein Homology CDS 285957 287183 . + 0 ID=cds-WP_000471822.1;Parent=gene-CCO35_RS01465;Dbxref=GenBank:WP_000471822.1;Name=WP_000471822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=CCO35_RS01465;product=PfkB family carbohydrate kinase;protein_id=WP_000471822.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 287195 287932 . + . ID=gene-CCO35_RS01470;Name=CCO35_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01470;old_locus_tag=CCO35_01470 NZ_NPME01000001.1 Protein Homology CDS 287195 287932 . + 0 ID=cds-WP_000697182.1;Parent=gene-CCO35_RS01470;Dbxref=GenBank:WP_000697182.1;Name=WP_000697182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=CCO35_RS01470;product=glutamine amidotransferase;protein_id=WP_000697182.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 287991 288884 . + . ID=gene-CCO35_RS01475;Name=CCO35_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01475;old_locus_tag=CCO35_01475 NZ_NPME01000001.1 Protein Homology CDS 287991 288884 . + 0 ID=cds-WP_001000516.1;Parent=gene-CCO35_RS01475;Dbxref=GenBank:WP_001000516.1;Name=WP_001000516.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=CCO35_RS01475;product=proline iminopeptidase-family hydrolase;protein_id=WP_001000516.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 288906 290249 . + . ID=gene-CCO35_RS01480;Name=CCO35_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01480;old_locus_tag=CCO35_01480 NZ_NPME01000001.1 Protein Homology CDS 288906 290249 . + 0 ID=cds-WP_000756083.1;Parent=gene-CCO35_RS01480;Dbxref=GenBank:WP_000756083.1;Name=WP_000756083.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=CCO35_RS01480;product=APC family permease;protein_id=WP_000756083.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 290413 290643 . + . ID=gene-CCO35_RS24260;Name=CCO35_RS24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24260 NZ_NPME01000001.1 Protein Homology CDS 290413 290643 . + 0 ID=cds-WP_418143684.1;Parent=gene-CCO35_RS24260;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=CCO35_RS24260;product=hypothetical protein;protein_id=WP_418143684.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 290651 292063 . + . ID=gene-CCO35_RS01490;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=CCO35_RS01490;old_locus_tag=CCO35_01490 NZ_NPME01000001.1 Protein Homology CDS 290651 292063 . + 0 ID=cds-WP_000751445.1;Parent=gene-CCO35_RS01490;Dbxref=GenBank:WP_000751445.1;Name=WP_000751445.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=CCO35_RS01490;product=pyruvate kinase PykF;protein_id=WP_000751445.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 292374 292610 . + . ID=gene-CCO35_RS01495;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=CCO35_RS01495;old_locus_tag=CCO35_01495 NZ_NPME01000001.1 Protein Homology CDS 292374 292610 . + 0 ID=cds-WP_001082307.1;Parent=gene-CCO35_RS01495;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=CCO35_RS01495;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 292678 293679 . - . ID=gene-CCO35_RS01500;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=CCO35_RS01500;old_locus_tag=CCO35_01500 NZ_NPME01000001.1 Protein Homology CDS 292678 293679 . - 0 ID=cds-WP_000817051.1;Parent=gene-CCO35_RS01500;Dbxref=GenBank:WP_000817051.1;Name=WP_000817051.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=CCO35_RS01500;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817051.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 293834 294250 . - . ID=gene-CCO35_RS01505;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=CCO35_RS01505;old_locus_tag=CCO35_01505 NZ_NPME01000001.1 Protein Homology CDS 293834 294250 . - 0 ID=cds-WP_000729470.1;Parent=gene-CCO35_RS01505;Dbxref=GenBank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=CCO35_RS01505;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 294263 295483 . - . ID=gene-CCO35_RS01510;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=CCO35_RS01510;old_locus_tag=CCO35_01510 NZ_NPME01000001.1 Protein Homology CDS 294263 295483 . - 0 ID=cds-WP_000143859.1;Parent=gene-CCO35_RS01510;Dbxref=GenBank:WP_000143859.1;Name=WP_000143859.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=CCO35_RS01510;product=cysteine desulfurase SufS;protein_id=WP_000143859.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 295480 296751 . - . ID=gene-CCO35_RS01515;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CCO35_RS01515;old_locus_tag=CCO35_01515 NZ_NPME01000001.1 Protein Homology CDS 295480 296751 . - 0 ID=cds-WP_000907939.1;Parent=gene-CCO35_RS01515;Dbxref=GenBank:WP_000907939.1;Name=WP_000907939.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=CCO35_RS01515;product=Fe-S cluster assembly protein SufD;protein_id=WP_000907939.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 296726 297472 . - . ID=gene-CCO35_RS01520;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CCO35_RS01520;old_locus_tag=CCO35_01520 NZ_NPME01000001.1 Protein Homology CDS 296726 297472 . - 0 ID=cds-WP_000948904.1;Parent=gene-CCO35_RS01520;Dbxref=GenBank:WP_000948904.1;Name=WP_000948904.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=CCO35_RS01520;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948904.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 297489 298976 . - . ID=gene-CCO35_RS01525;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CCO35_RS01525;old_locus_tag=CCO35_01525 NZ_NPME01000001.1 Protein Homology CDS 297489 298976 . - 0 ID=cds-WP_000089383.1;Parent=gene-CCO35_RS01525;Dbxref=GenBank:WP_000089383.1;Name=WP_000089383.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=CCO35_RS01525;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089383.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 298985 299353 . - . ID=gene-CCO35_RS01530;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=CCO35_RS01530;old_locus_tag=CCO35_01530 NZ_NPME01000001.1 Protein Homology CDS 298985 299353 . - 0 ID=cds-WP_000418969.1;Parent=gene-CCO35_RS01530;Dbxref=GenBank:WP_000418969.1;Name=WP_000418969.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=CCO35_RS01530;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418969.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 299780 301126 . + . ID=gene-CCO35_RS01535;Name=CCO35_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01535;old_locus_tag=CCO35_01535 NZ_NPME01000001.1 Protein Homology CDS 299780 301126 . + 0 ID=cds-WP_000261859.1;Parent=gene-CCO35_RS01535;Dbxref=GenBank:WP_000261859.1;Name=WP_000261859.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=CCO35_RS01535;product=L-cystine transporter;protein_id=WP_000261859.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 301414 301602 . - . ID=gene-CCO35_RS01540;Name=CCO35_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01540;old_locus_tag=CCO35_01540 NZ_NPME01000001.1 Protein Homology CDS 301414 301602 . - 0 ID=cds-WP_001537749.1;Parent=gene-CCO35_RS01540;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=CCO35_RS01540;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 301701 302111 . - . ID=gene-CCO35_RS01545;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CCO35_RS01545;old_locus_tag=CCO35_01545 NZ_NPME01000001.1 Protein Homology CDS 301701 302111 . - 0 ID=cds-WP_000637926.1;Parent=gene-CCO35_RS01545;Dbxref=GenBank:WP_000637926.1;Name=WP_000637926.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=CCO35_RS01545;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637926.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 302108 305164 . - . ID=gene-CCO35_RS01550;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=CCO35_RS01550;old_locus_tag=CCO35_01550 NZ_NPME01000001.1 Protein Homology CDS 302108 305164 . - 0 ID=cds-WP_000612901.1;Parent=gene-CCO35_RS01550;Dbxref=GenBank:WP_000612901.1;Name=WP_000612901.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=CCO35_RS01550;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_000612901.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 305429 306547 . + . ID=gene-CCO35_RS01555;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=CCO35_RS01555;old_locus_tag=CCO35_01555 NZ_NPME01000001.1 Protein Homology CDS 305429 306547 . + 0 ID=cds-WP_000248615.1;Parent=gene-CCO35_RS01555;Dbxref=GenBank:WP_000248615.1;Name=WP_000248615.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=CCO35_RS01555;product=AI-2E family transporter YdiK;protein_id=WP_000248615.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 306730 306837 . + . ID=gene-CCO35_RS01560;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=CCO35_RS01560;old_locus_tag=CCO35_01560 NZ_NPME01000001.1 cmsearch antisense_RNA 306730 306837 . + . ID=rna-CCO35_RS01560;Parent=gene-CCO35_RS01560;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS01560;product=antisense sRNA RprA NZ_NPME01000001.1 cmsearch exon 306730 306837 . + . ID=exon-CCO35_RS01560-1;Parent=rna-CCO35_RS01560;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS01560;product=antisense sRNA RprA NZ_NPME01000001.1 RefSeq gene 307005 307364 . + . ID=gene-CCO35_RS01565;Name=CCO35_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01565;old_locus_tag=CCO35_01565 NZ_NPME01000001.1 Protein Homology CDS 307005 307364 . + 0 ID=cds-WP_000980454.1;Parent=gene-CCO35_RS01565;Dbxref=GenBank:WP_000980454.1;Name=WP_000980454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=CCO35_RS01565;product=YdiL family protein;protein_id=WP_000980454.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 307505 308716 . + . ID=gene-CCO35_RS01570;Name=CCO35_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01570;old_locus_tag=CCO35_01570 NZ_NPME01000001.1 Protein Homology CDS 307505 308716 . + 0 ID=cds-WP_000797669.1;Parent=gene-CCO35_RS01570;Dbxref=GenBank:WP_000797669.1;Name=WP_000797669.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=CCO35_RS01570;product=MFS transporter;protein_id=WP_000797669.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 309080 310315 . + . ID=gene-CCO35_RS01575;Name=CCO35_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01575;old_locus_tag=CCO35_01575 NZ_NPME01000001.1 Protein Homology CDS 309080 310315 . + 0 ID=cds-WP_000081215.1;Parent=gene-CCO35_RS01575;Dbxref=GenBank:WP_000081215.1;Name=WP_000081215.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=CCO35_RS01575;product=MFS transporter;protein_id=WP_000081215.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 310382 311248 . + . ID=gene-CCO35_RS01580;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=CCO35_RS01580;old_locus_tag=CCO35_01580 NZ_NPME01000001.1 Protein Homology CDS 310382 311248 . + 0 ID=cds-WP_000383488.1;Parent=gene-CCO35_RS01580;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=CCO35_RS01580;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 311293 312051 . + . ID=gene-CCO35_RS01585;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CCO35_RS01585;old_locus_tag=CCO35_01585 NZ_NPME01000001.1 Protein Homology CDS 311293 312051 . + 0 ID=cds-WP_000860221.1;Parent=gene-CCO35_RS01585;Dbxref=GenBank:WP_000860221.1;Name=WP_000860221.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=CCO35_RS01585;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860221.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 312205 313800 . + . ID=gene-CCO35_RS01590;Name=CCO35_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01590;old_locus_tag=CCO35_01590 NZ_NPME01000001.1 Protein Homology CDS 312205 313800 . + 0 ID=cds-WP_000773598.1;Parent=gene-CCO35_RS01590;Dbxref=GenBank:WP_000773598.1;Name=WP_000773598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=CCO35_RS01590;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000773598.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 313814 314965 . + . ID=gene-CCO35_RS01595;Name=CCO35_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01595;old_locus_tag=CCO35_01595 NZ_NPME01000001.1 Protein Homology CDS 313814 314965 . + 0 ID=cds-WP_000347819.1;Parent=gene-CCO35_RS01595;Dbxref=GenBank:WP_000347819.1;Name=WP_000347819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=CCO35_RS01595;product=acyl-CoA dehydrogenase;protein_id=WP_000347819.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 315041 315931 . - . ID=gene-CCO35_RS01600;Name=CCO35_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01600;old_locus_tag=CCO35_01600 NZ_NPME01000001.1 Protein Homology CDS 315041 315931 . - 0 ID=cds-WP_000284832.1;Parent=gene-CCO35_RS01600;Dbxref=GenBank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=CCO35_RS01600;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 316394 317158 . + . ID=gene-CCO35_RS01605;Name=CCO35_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01605;old_locus_tag=CCO35_01605 NZ_NPME01000001.1 Protein Homology CDS 316394 317158 . + 0 ID=cds-WP_031565890.1;Parent=gene-CCO35_RS01605;Dbxref=GenBank:WP_031565890.1;Name=WP_031565890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=CCO35_RS01605;product=electron transfer flavoprotein;protein_id=WP_031565890.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 317180 318115 . + . ID=gene-CCO35_RS01610;Name=CCO35_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01610;old_locus_tag=CCO35_01610 NZ_NPME01000001.1 Protein Homology CDS 317180 318115 . + 0 ID=cds-WP_001015880.1;Parent=gene-CCO35_RS01610;Dbxref=GenBank:WP_001015880.1;Name=WP_001015880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=CCO35_RS01610;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015880.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 318172 319458 . + . ID=gene-CCO35_RS01615;Name=CCO35_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01615;old_locus_tag=CCO35_01615 NZ_NPME01000001.1 Protein Homology CDS 318172 319458 . + 0 ID=cds-WP_001278565.1;Parent=gene-CCO35_RS01615;Dbxref=GenBank:WP_001278565.1;Name=WP_001278565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=CCO35_RS01615;product=FAD-dependent oxidoreductase;protein_id=WP_001278565.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 319455 319748 . + . ID=gene-CCO35_RS01620;Name=CCO35_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01620;old_locus_tag=CCO35_01620 NZ_NPME01000001.1 Protein Homology CDS 319455 319748 . + 0 ID=cds-WP_000093362.1;Parent=gene-CCO35_RS01620;Dbxref=GenBank:WP_000093362.1;Name=WP_000093362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=CCO35_RS01620;product=ferredoxin family protein;protein_id=WP_000093362.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 319838 321478 . + . ID=gene-CCO35_RS01625;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=CCO35_RS01625;old_locus_tag=CCO35_01625 NZ_NPME01000001.1 Protein Homology CDS 319838 321478 . + 0 ID=cds-WP_001649708.1;Parent=gene-CCO35_RS01625;Dbxref=GenBank:WP_001649708.1;Name=WP_001649708.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=CCO35_RS01625;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_001649708.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 321520 323898 . - . ID=gene-CCO35_RS01630;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=CCO35_RS01630;old_locus_tag=CCO35_01630 NZ_NPME01000001.1 Protein Homology CDS 321520 323898 . - 0 ID=cds-WP_000069340.1;Parent=gene-CCO35_RS01630;Dbxref=GenBank:WP_000069340.1;Name=WP_000069340.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=CCO35_RS01630;product=phosphoenolpyruvate synthase;protein_id=WP_000069340.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 324235 325068 . + . ID=gene-CCO35_RS01635;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=CCO35_RS01635;old_locus_tag=CCO35_01635 NZ_NPME01000001.1 Protein Homology CDS 324235 325068 . + 0 ID=cds-WP_000370992.1;Parent=gene-CCO35_RS01635;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=CCO35_RS01635;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 325224 326270 . + . ID=gene-CCO35_RS01640;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=CCO35_RS01640;old_locus_tag=CCO35_01640 NZ_NPME01000001.1 Protein Homology CDS 325224 326270 . + 0 ID=cds-WP_001082196.1;Parent=gene-CCO35_RS01640;Dbxref=GenBank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=CCO35_RS01640;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 326427 326618 . + . ID=gene-CCO35_RS01645;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=CCO35_RS01645;old_locus_tag=CCO35_01645 NZ_NPME01000001.1 Protein Homology CDS 326427 326618 . + 0 ID=cds-WP_000089115.1;Parent=gene-CCO35_RS01645;Dbxref=GenBank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=CCO35_RS01645;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 326653 328095 . - . ID=gene-CCO35_RS01650;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=CCO35_RS01650;old_locus_tag=CCO35_01650 NZ_NPME01000001.1 Protein Homology CDS 326653 328095 . - 0 ID=cds-WP_023232946.1;Parent=gene-CCO35_RS01650;Dbxref=GenBank:WP_023232946.1;Name=WP_023232946.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=CCO35_RS01650;product=protein adenylyltransferase SelO;protein_id=WP_023232946.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 328157 328870 . - . ID=gene-CCO35_RS01655;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=CCO35_RS01655;old_locus_tag=CCO35_01655 NZ_NPME01000001.1 Protein Homology CDS 328157 328870 . - 0 ID=cds-WP_000562007.1;Parent=gene-CCO35_RS01655;Dbxref=GenBank:WP_000562007.1;Name=WP_000562007.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=CCO35_RS01655;product=anti-FlhDC factor YdiV;protein_id=WP_000562007.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 329184 329648 . - . ID=gene-CCO35_RS01660;Name=CCO35_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01660;old_locus_tag=CCO35_01660 NZ_NPME01000001.1 Protein Homology CDS 329184 329648 . - 0 ID=cds-WP_001213256.1;Parent=gene-CCO35_RS01660;Dbxref=GenBank:WP_001213256.1;Name=WP_001213256.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=CCO35_RS01660;product=C40 family peptidase;protein_id=WP_001213256.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 329725 330474 . - . ID=gene-CCO35_RS01665;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=CCO35_RS01665;old_locus_tag=CCO35_01665 NZ_NPME01000001.1 Protein Homology CDS 329725 330474 . - 0 ID=cds-WP_000080616.1;Parent=gene-CCO35_RS01665;Dbxref=GenBank:WP_000080616.1;Name=WP_000080616.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=CCO35_RS01665;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000080616.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 330474 331025 . - . ID=gene-CCO35_RS01670;Name=CCO35_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01670;old_locus_tag=CCO35_01670 NZ_NPME01000001.1 Protein Homology CDS 330474 331025 . - 0 ID=cds-WP_001181565.1;Parent=gene-CCO35_RS01670;Dbxref=GenBank:WP_001181565.1;Name=WP_001181565.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=CCO35_RS01670;product=glutathione peroxidase;protein_id=WP_001181565.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 331117 332097 . - . ID=gene-CCO35_RS01675;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=CCO35_RS01675;old_locus_tag=CCO35_01675 NZ_NPME01000001.1 Protein Homology CDS 331117 332097 . - 0 ID=cds-WP_000954984.1;Parent=gene-CCO35_RS01675;Dbxref=GenBank:WP_000954984.1;Name=WP_000954984.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=CCO35_RS01675;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954984.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 332300 332599 . - . ID=gene-CCO35_RS01680;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=CCO35_RS01680;old_locus_tag=CCO35_01680 NZ_NPME01000001.1 Protein Homology CDS 332300 332599 . - 0 ID=cds-WP_001229266.1;Parent=gene-CCO35_RS01680;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=CCO35_RS01680;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 332604 334991 . - . ID=gene-CCO35_RS01685;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CCO35_RS01685;old_locus_tag=CCO35_01685 NZ_NPME01000001.1 Protein Homology CDS 332604 334991 . - 0 ID=cds-WP_000672403.1;Parent=gene-CCO35_RS01685;Dbxref=GenBank:WP_000672403.1;Name=WP_000672403.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=CCO35_RS01685;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672403.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 335007 335990 . - . ID=gene-CCO35_RS01690;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CCO35_RS01690;old_locus_tag=CCO35_01690 NZ_NPME01000001.1 Protein Homology CDS 335007 335990 . - 0 ID=cds-WP_000018570.1;Parent=gene-CCO35_RS01690;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=CCO35_RS01690;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11 NZ_NPME01000001.1 cmsearch sequence_feature 336053 336176 . - . ID=id-NZ_NPME01000001.1:336053..336176;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPME01000001.1 RefSeq gene 336127 336171 . - . ID=gene-CCO35_RS23555;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=CCO35_RS23555 NZ_NPME01000001.1 Protein Homology CDS 336127 336171 . - 0 ID=cds-WP_001386830.1;Parent=gene-CCO35_RS23555;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=CCO35_RS23555;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 336292 336648 . - . ID=gene-CCO35_RS01695;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CCO35_RS01695;old_locus_tag=CCO35_01695 NZ_NPME01000001.1 Protein Homology CDS 336292 336648 . - 0 ID=cds-WP_000124850.1;Parent=gene-CCO35_RS01695;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=CCO35_RS01695;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 336699 336896 . - . ID=gene-CCO35_RS01700;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CCO35_RS01700;old_locus_tag=CCO35_01700 NZ_NPME01000001.1 Protein Homology CDS 336699 336896 . - 0 ID=cds-WP_001124225.1;Parent=gene-CCO35_RS01700;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=CCO35_RS01700;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 336992 337534 . - . ID=gene-CCO35_RS01705;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CCO35_RS01705;old_locus_tag=CCO35_01705 NZ_NPME01000001.1 Protein Homology CDS 336992 337534 . - 0 ID=cds-WP_001574431.1;Parent=gene-CCO35_RS01705;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=CCO35_RS01705;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 337538 339466 . - . ID=gene-CCO35_RS01710;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CCO35_RS01710;old_locus_tag=CCO35_01710 NZ_NPME01000001.1 Protein Homology CDS 337538 339466 . - 0 ID=cds-WP_001144226.1;Parent=gene-CCO35_RS01710;Dbxref=GenBank:WP_001144226.1;Name=WP_001144226.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=CCO35_RS01710;product=threonine--tRNA ligase;protein_id=WP_001144226.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 339726 340580 . - . ID=gene-CCO35_RS01720;Name=CCO35_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01720;old_locus_tag=CCO35_01720 NZ_NPME01000001.1 Protein Homology CDS 339726 340580 . - 0 ID=cds-WP_001044093.1;Parent=gene-CCO35_RS01720;Dbxref=GenBank:WP_001044093.1;Name=WP_001044093.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=CCO35_RS01720;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044093.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 340577 340891 . - . ID=gene-CCO35_RS01725;Name=CCO35_RS01725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS01725;old_locus_tag=CCO35_01725;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 340577 340891 . - 0 ID=cds-CCO35_RS01725;Parent=gene-CCO35_RS01725;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=CCO35_RS01725;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 341034 341993 . + . ID=gene-CCO35_RS01730;Name=CCO35_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01730;old_locus_tag=CCO35_01730 NZ_NPME01000001.1 Protein Homology CDS 341034 341993 . + 0 ID=cds-WP_001046434.1;Parent=gene-CCO35_RS01730;Dbxref=GenBank:WP_001046434.1;Name=WP_001046434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=CCO35_RS01730;product=lipid A deacylase LpxR family protein;protein_id=WP_001046434.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 342042 342800 . - . ID=gene-CCO35_RS01735;Name=CCO35_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01735;old_locus_tag=CCO35_01735 NZ_NPME01000001.1 Protein Homology CDS 342042 342800 . - 0 ID=cds-WP_000770981.1;Parent=gene-CCO35_RS01735;Dbxref=GenBank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=CCO35_RS01735;product=DUF481 domain-containing protein;protein_id=WP_000770981.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 343089 344021 . + . ID=gene-CCO35_RS01740;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO35_RS01740;old_locus_tag=CCO35_01740 NZ_NPME01000001.1 Protein Homology CDS 343089 344021 . + 0 ID=cds-WP_031565831.1;Parent=gene-CCO35_RS01740;Dbxref=GenBank:WP_031565831.1;Name=WP_031565831.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=CCO35_RS01740;product=6-phosphofructokinase II;protein_id=WP_031565831.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 344118 344408 . + . ID=gene-CCO35_RS01745;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=CCO35_RS01745;old_locus_tag=CCO35_01745 NZ_NPME01000001.1 Protein Homology CDS 344118 344408 . + 0 ID=cds-WP_000146133.1;Parent=gene-CCO35_RS01745;Dbxref=GenBank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=CCO35_RS01745;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 344515 345375 . + . ID=gene-CCO35_RS01750;Name=CCO35_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01750;old_locus_tag=CCO35_01750 NZ_NPME01000001.1 Protein Homology CDS 344515 345375 . + 0 ID=cds-WP_000267686.1;Parent=gene-CCO35_RS01750;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=CCO35_RS01750;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 345418 345954 . - . ID=gene-CCO35_RS01755;Name=CCO35_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01755;old_locus_tag=CCO35_01755 NZ_NPME01000001.1 Protein Homology CDS 345418 345954 . - 0 ID=cds-WP_000222158.1;Parent=gene-CCO35_RS01755;Dbxref=GenBank:WP_000222158.1;Name=WP_000222158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=CCO35_RS01755;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 346103 346771 . + . ID=gene-CCO35_RS01760;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=CCO35_RS01760;old_locus_tag=CCO35_01760 NZ_NPME01000001.1 Protein Homology CDS 346103 346771 . + 0 ID=cds-WP_000106857.1;Parent=gene-CCO35_RS01760;Dbxref=GenBank:WP_000106857.1;Name=WP_000106857.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=CCO35_RS01760;product=hexitol phosphatase HxpB;protein_id=WP_000106857.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 346909 347508 . + . ID=gene-CCO35_RS01765;Name=CCO35_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01765;old_locus_tag=CCO35_01765 NZ_NPME01000001.1 Protein Homology CDS 346909 347508 . + 0 ID=cds-WP_000505804.1;Parent=gene-CCO35_RS01765;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=CCO35_RS01765;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 347645 349036 . + . ID=gene-CCO35_RS01770;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=CCO35_RS01770;old_locus_tag=CCO35_01770 NZ_NPME01000001.1 Protein Homology CDS 347645 349036 . + 0 ID=cds-WP_001010666.1;Parent=gene-CCO35_RS01770;Dbxref=GenBank:WP_001010666.1;Name=WP_001010666.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=CCO35_RS01770;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010666.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 349139 349381 . - . ID=gene-CCO35_RS01775;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=CCO35_RS01775;old_locus_tag=CCO35_01775 NZ_NPME01000001.1 Protein Homology CDS 349139 349381 . - 0 ID=cds-WP_000977510.1;Parent=gene-CCO35_RS01775;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=CCO35_RS01775;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 349746 351998 . + . ID=gene-CCO35_RS01785;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=CCO35_RS01785;old_locus_tag=CCO35_01785 NZ_NPME01000001.1 Protein Homology CDS 349746 351998 . + 0 ID=cds-WP_023262562.1;Parent=gene-CCO35_RS01785;Dbxref=GenBank:WP_023262562.1;Name=WP_023262562.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=CCO35_RS01785;product=catalase HPII;protein_id=WP_023262562.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 352042 352800 . - . ID=gene-CCO35_RS01790;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=CCO35_RS01790;old_locus_tag=CCO35_01790 NZ_NPME01000001.1 Protein Homology CDS 352042 352800 . - 0 ID=cds-WP_023212244.1;Parent=gene-CCO35_RS01790;Dbxref=GenBank:WP_023212244.1;Name=WP_023212244.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=CCO35_RS01790;product=chitin disaccharide deacetylase;protein_id=WP_023212244.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 352813 354168 . - . ID=gene-CCO35_RS01795;Name=CCO35_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01795;old_locus_tag=CCO35_01795 NZ_NPME01000001.1 Protein Homology CDS 352813 354168 . - 0 ID=cds-WP_000078772.1;Parent=gene-CCO35_RS01795;Dbxref=GenBank:WP_000078772.1;Name=WP_000078772.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=CCO35_RS01795;product=6-phospho-beta-glucosidase;protein_id=WP_000078772.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 354293 355135 . - . ID=gene-CCO35_RS01800;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=CCO35_RS01800;old_locus_tag=CCO35_01800 NZ_NPME01000001.1 Protein Homology CDS 354293 355135 . - 0 ID=cds-WP_000983393.1;Parent=gene-CCO35_RS01800;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=CCO35_RS01800;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 355146 355493 . - . ID=gene-CCO35_RS01805;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=CCO35_RS01805;old_locus_tag=CCO35_01805 NZ_NPME01000001.1 Protein Homology CDS 355146 355493 . - 0 ID=cds-WP_000459883.1;Parent=gene-CCO35_RS01805;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=CCO35_RS01805;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 355544 356902 . - . ID=gene-CCO35_RS01810;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=CCO35_RS01810;old_locus_tag=CCO35_01810 NZ_NPME01000001.1 Protein Homology CDS 355544 356902 . - 0 ID=cds-WP_000073063.1;Parent=gene-CCO35_RS01810;Dbxref=GenBank:WP_000073063.1;Name=WP_000073063.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=CCO35_RS01810;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073063.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 356985 357305 . - . ID=gene-CCO35_RS01815;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=CCO35_RS01815;old_locus_tag=CCO35_01815 NZ_NPME01000001.1 Protein Homology CDS 356985 357305 . - 0 ID=cds-WP_000412161.1;Parent=gene-CCO35_RS01815;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=CCO35_RS01815;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 357606 357947 . - . ID=gene-CCO35_RS01825;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=CCO35_RS01825;old_locus_tag=CCO35_01825 NZ_NPME01000001.1 Protein Homology CDS 357606 357947 . - 0 ID=cds-WP_001039301.1;Parent=gene-CCO35_RS01825;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=CCO35_RS01825;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 358166 358993 . + . ID=gene-CCO35_RS01830;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CCO35_RS01830;old_locus_tag=CCO35_01830 NZ_NPME01000001.1 Protein Homology CDS 358166 358993 . + 0 ID=cds-WP_000174980.1;Parent=gene-CCO35_RS01830;Dbxref=GenBank:WP_000174980.1;Name=WP_000174980.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=CCO35_RS01830;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174980.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 359114 359995 . + . ID=gene-CCO35_RS01835;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=CCO35_RS01835;old_locus_tag=CCO35_01835 NZ_NPME01000001.1 Protein Homology CDS 359114 359995 . + 0 ID=cds-WP_001518228.1;Parent=gene-CCO35_RS01835;Dbxref=GenBank:WP_001518228.1;Name=WP_001518228.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=CCO35_RS01835;product=excinuclease Cho;protein_id=WP_001518228.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 360070 360555 . - . ID=gene-CCO35_RS01840;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=CCO35_RS01840;old_locus_tag=CCO35_01840 NZ_NPME01000001.1 Protein Homology CDS 360070 360555 . - 0 ID=cds-WP_001228998.1;Parent=gene-CCO35_RS01840;Dbxref=GenBank:WP_001228998.1;Name=WP_001228998.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=CCO35_RS01840;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228998.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 360891 361859 . - . ID=gene-CCO35_RS01850;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=CCO35_RS01850;old_locus_tag=CCO35_01850 NZ_NPME01000001.1 Protein Homology CDS 360891 361859 . - 0 ID=cds-WP_000368445.1;Parent=gene-CCO35_RS01850;Dbxref=GenBank:WP_000368445.1;Name=WP_000368445.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=CCO35_RS01850;product=succinylglutamate desuccinylase;protein_id=WP_000368445.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 361852 363195 . - . ID=gene-CCO35_RS01855;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=CCO35_RS01855;old_locus_tag=CCO35_01855 NZ_NPME01000001.1 Protein Homology CDS 361852 363195 . - 0 ID=cds-WP_000123941.1;Parent=gene-CCO35_RS01855;Dbxref=GenBank:WP_000123941.1;Name=WP_000123941.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=CCO35_RS01855;product=N-succinylarginine dihydrolase;protein_id=WP_000123941.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 363192 364670 . - . ID=gene-CCO35_RS01860;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=CCO35_RS01860;old_locus_tag=CCO35_01860 NZ_NPME01000001.1 Protein Homology CDS 363192 364670 . - 0 ID=cds-WP_000177263.1;Parent=gene-CCO35_RS01860;Dbxref=GenBank:WP_000177263.1;Name=WP_000177263.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=CCO35_RS01860;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177263.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 364667 365701 . - . ID=gene-CCO35_RS01865;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=CCO35_RS01865;old_locus_tag=CCO35_01865 NZ_NPME01000001.1 Protein Homology CDS 364667 365701 . - 0 ID=cds-WP_001263885.1;Parent=gene-CCO35_RS01865;Dbxref=GenBank:WP_001263885.1;Name=WP_001263885.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=CCO35_RS01865;product=arginine N-succinyltransferase;protein_id=WP_001263885.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 365692 366918 . - . ID=gene-CCO35_RS01870;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=CCO35_RS01870;old_locus_tag=CCO35_01870 NZ_NPME01000001.1 Protein Homology CDS 365692 366918 . - 0 ID=cds-WP_031565788.1;Parent=gene-CCO35_RS01870;Dbxref=GenBank:WP_031565788.1;Name=WP_031565788.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=CCO35_RS01870;product=succinylornithine/acetylornithine transaminase;protein_id=WP_031565788.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 367363 368169 . + . ID=gene-CCO35_RS01875;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=CCO35_RS01875;old_locus_tag=CCO35_01875 NZ_NPME01000001.1 Protein Homology CDS 367363 368169 . + 0 ID=cds-WP_000673954.1;Parent=gene-CCO35_RS01875;Dbxref=GenBank:WP_000673954.1;Name=WP_000673954.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=CCO35_RS01875;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 368242 368658 . + . ID=gene-CCO35_RS01880;Name=CCO35_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01880;old_locus_tag=CCO35_01880 NZ_NPME01000001.1 Protein Homology CDS 368242 368658 . + 0 ID=cds-WP_000592140.1;Parent=gene-CCO35_RS01880;Dbxref=GenBank:WP_000592140.1;Name=WP_000592140.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=CCO35_RS01880;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592140.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 368618 368893 . - . ID=gene-CCO35_RS01885;Name=CCO35_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01885;old_locus_tag=CCO35_01885 NZ_NPME01000001.1 Protein Homology CDS 368618 368893 . - 0 ID=cds-WP_000336847.1;Parent=gene-CCO35_RS01885;Dbxref=GenBank:WP_000336847.1;Name=WP_000336847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=CCO35_RS01885;product=YnjH family protein;protein_id=WP_000336847.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 369132 370475 . + . ID=gene-CCO35_RS01890;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=CCO35_RS01890;old_locus_tag=CCO35_01890 NZ_NPME01000001.1 Protein Homology CDS 369132 370475 . + 0 ID=cds-WP_000372865.1;Parent=gene-CCO35_RS01890;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=CCO35_RS01890;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 370505 372454 . - . ID=gene-CCO35_RS01895;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=CCO35_RS01895;old_locus_tag=CCO35_01895 NZ_NPME01000001.1 Protein Homology CDS 370505 372454 . - 0 ID=cds-WP_031565776.1;Parent=gene-CCO35_RS01895;Dbxref=GenBank:WP_031565776.1;Name=WP_031565776.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=CCO35_RS01895;product=DNA topoisomerase III;protein_id=WP_031565776.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 372459 373502 . - . ID=gene-CCO35_RS01900;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=CCO35_RS01900;old_locus_tag=CCO35_01900 NZ_NPME01000001.1 Protein Homology CDS 372459 373502 . - 0 ID=cds-WP_001294888.1;Parent=gene-CCO35_RS01900;Dbxref=GenBank:WP_001294888.1;Name=WP_001294888.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=CCO35_RS01900;product=selenide%2C water dikinase SelD;protein_id=WP_001294888.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 373620 374171 . - . ID=gene-CCO35_RS01910;Name=CCO35_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01910;old_locus_tag=CCO35_01910 NZ_NPME01000001.1 Protein Homology CDS 373620 374171 . - 0 ID=cds-WP_000339305.1;Parent=gene-CCO35_RS01910;Dbxref=GenBank:WP_000339305.1;Name=WP_000339305.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=CCO35_RS01910;product=NAD(P)H nitroreductase;protein_id=WP_000339305.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 374345 376201 . + . ID=gene-CCO35_RS01920;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CCO35_RS01920;old_locus_tag=CCO35_01920 NZ_NPME01000001.1 Protein Homology CDS 374345 376201 . + 0 ID=cds-WP_031565766.1;Parent=gene-CCO35_RS01920;Dbxref=GenBank:WP_031565766.1;Name=WP_031565766.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=CCO35_RS01920;product=signal peptide peptidase SppA;protein_id=WP_031565766.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 376297 377313 . + . ID=gene-CCO35_RS01925;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=CCO35_RS01925;old_locus_tag=CCO35_01925 NZ_NPME01000001.1 Protein Homology CDS 376297 377313 . + 0 ID=cds-WP_001170136.1;Parent=gene-CCO35_RS01925;Dbxref=GenBank:WP_001170136.1;Name=WP_001170136.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=CCO35_RS01925;product=asparaginase;protein_id=WP_001170136.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 377340 377996 . + . ID=gene-CCO35_RS01930;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=CCO35_RS01930;old_locus_tag=CCO35_01930 NZ_NPME01000001.1 Protein Homology CDS 377340 377996 . + 0 ID=cds-WP_000184707.1;Parent=gene-CCO35_RS01930;Dbxref=GenBank:WP_000184707.1;Name=WP_000184707.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=CCO35_RS01930;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184707.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 378347 378625 . - . ID=gene-CCO35_RS01935;Name=CCO35_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01935;old_locus_tag=CCO35_01935 NZ_NPME01000001.1 Protein Homology CDS 378347 378625 . - 0 ID=cds-WP_001046864.1;Parent=gene-CCO35_RS01935;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=CCO35_RS01935;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 378667 379080 . - . ID=gene-CCO35_RS01940;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CCO35_RS01940;old_locus_tag=CCO35_01940 NZ_NPME01000001.1 Protein Homology CDS 378667 379080 . - 0 ID=cds-WP_001519539.1;Parent=gene-CCO35_RS01940;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=CCO35_RS01940;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 379422 380417 . + . ID=gene-CCO35_RS01945;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=CCO35_RS01945;old_locus_tag=CCO35_01945 NZ_NPME01000001.1 Protein Homology CDS 379422 380417 . + 0 ID=cds-WP_000153505.1;Parent=gene-CCO35_RS01945;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=CCO35_RS01945;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 380746 381630 . + . ID=gene-CCO35_RS01955;Name=CCO35_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01955;old_locus_tag=CCO35_01955 NZ_NPME01000001.1 Protein Homology CDS 380746 381630 . + 0 ID=cds-WP_031565737.1;Parent=gene-CCO35_RS01955;Dbxref=GenBank:WP_031565737.1;Name=WP_031565737.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=CCO35_RS01955;product=D-hexose-6-phosphate mutarotase;protein_id=WP_031565737.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 381729 382586 . - . ID=gene-CCO35_RS01960;Name=CCO35_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01960;old_locus_tag=CCO35_01960 NZ_NPME01000001.1 Protein Homology CDS 381729 382586 . - 0 ID=cds-WP_000843751.1;Parent=gene-CCO35_RS01960;Dbxref=GenBank:WP_000843751.1;Name=WP_000843751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=CCO35_RS01960;product=aldo/keto reductase;protein_id=WP_000843751.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 382683 383879 . - . ID=gene-CCO35_RS01965;Name=CCO35_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01965;old_locus_tag=CCO35_01965 NZ_NPME01000001.1 Protein Homology CDS 382683 383879 . - 0 ID=cds-WP_000029249.1;Parent=gene-CCO35_RS01965;Dbxref=GenBank:WP_000029249.1;Name=WP_000029249.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=CCO35_RS01965;product=anaerobic sulfatase maturase;protein_id=WP_000029249.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 384169 384915 . - . ID=gene-CCO35_RS01970;Name=CCO35_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01970;old_locus_tag=CCO35_01970 NZ_NPME01000001.1 Protein Homology CDS 384169 384915 . - 0 ID=cds-WP_000163762.1;Parent=gene-CCO35_RS01970;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=CCO35_RS01970;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 385343 387277 . + . ID=gene-CCO35_RS01975;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=CCO35_RS01975;old_locus_tag=CCO35_01975 NZ_NPME01000001.1 Protein Homology CDS 385343 387277 . + 0 ID=cds-WP_031565722.1;Parent=gene-CCO35_RS01975;Dbxref=GenBank:WP_031565722.1;Name=WP_031565722.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=CCO35_RS01975;product=protein kinase YeaG;protein_id=WP_031565722.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 387400 388686 . + . ID=gene-CCO35_RS01980;Name=CCO35_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01980;old_locus_tag=CCO35_01980 NZ_NPME01000001.1 Protein Homology CDS 387400 388686 . + 0 ID=cds-WP_023208120.1;Parent=gene-CCO35_RS01980;Dbxref=GenBank:WP_023208120.1;Name=WP_023208120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=CCO35_RS01980;product=YeaH/YhbH family protein;protein_id=WP_023208120.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 388836 389033 . - . ID=gene-CCO35_RS01985;Name=CCO35_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01985;old_locus_tag=CCO35_01985 NZ_NPME01000001.1 GeneMarkS-2+ CDS 388836 389033 . - 0 ID=cds-WP_024146682.1;Parent=gene-CCO35_RS01985;Dbxref=GenBank:WP_024146682.1;Name=WP_024146682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS01985;product=hypothetical protein;protein_id=WP_024146682.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 389327 390820 . + . ID=gene-CCO35_RS01990;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=CCO35_RS01990;old_locus_tag=CCO35_01990 NZ_NPME01000001.1 Protein Homology CDS 389327 390820 . + 0 ID=cds-WP_023193575.1;Parent=gene-CCO35_RS01990;Dbxref=GenBank:WP_023193575.1;Name=WP_023193575.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=CCO35_RS01990;product=diguanylate cyclase DgcJ;protein_id=WP_023193575.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 390870 391388 . + . ID=gene-CCO35_RS01995;Name=CCO35_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS01995;old_locus_tag=CCO35_01995 NZ_NPME01000001.1 Protein Homology CDS 390870 391388 . + 0 ID=cds-WP_023893413.1;Parent=gene-CCO35_RS01995;Dbxref=GenBank:WP_023893413.1;Name=WP_023893413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=CCO35_RS01995;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_023893413.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 391385 391492 . - . ID=gene-CCO35_RS02000;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=CCO35_RS02000;old_locus_tag=CCO35_02000 NZ_NPME01000001.1 Protein Homology CDS 391385 391492 . - 0 ID=cds-WP_000272239.1;Parent=gene-CCO35_RS02000;Dbxref=GenBank:WP_000272239.1;Name=WP_000272239.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=CCO35_RS02000;product=small membrane protein YoaI;protein_id=WP_000272239.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 391698 392144 . + . ID=gene-CCO35_RS02005;Name=CCO35_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02005;old_locus_tag=CCO35_02005 NZ_NPME01000001.1 Protein Homology CDS 391698 392144 . + 0 ID=cds-WP_000460698.1;Parent=gene-CCO35_RS02005;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=CCO35_RS02005;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 392124 392918 . - . ID=gene-CCO35_RS02010;Name=CCO35_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02010;old_locus_tag=CCO35_02010 NZ_NPME01000001.1 Protein Homology CDS 392124 392918 . - 0 ID=cds-WP_000579793.1;Parent=gene-CCO35_RS02010;Dbxref=GenBank:WP_000579793.1;Name=WP_000579793.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=CCO35_RS02010;product=AraC family transcriptional regulator;protein_id=WP_000579793.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 393019 394203 . + . ID=gene-CCO35_RS02015;Name=CCO35_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02015;old_locus_tag=CCO35_02015 NZ_NPME01000001.1 Protein Homology CDS 393019 394203 . + 0 ID=cds-WP_000205342.1;Parent=gene-CCO35_RS02015;Dbxref=GenBank:WP_000205342.1;Name=WP_000205342.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=CCO35_RS02015;product=CynX/NimT family MFS transporter;protein_id=WP_000205342.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 394324 394671 . + . ID=gene-CCO35_RS02020;Name=CCO35_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02020;old_locus_tag=CCO35_02020 NZ_NPME01000001.1 Protein Homology CDS 394324 394671 . + 0 ID=cds-WP_001222532.1;Parent=gene-CCO35_RS02020;Dbxref=GenBank:WP_001222532.1;Name=WP_001222532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=CCO35_RS02020;product=DUF488 domain-containing protein;protein_id=WP_001222532.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 394657 394968 . - . ID=gene-CCO35_RS02025;Name=CCO35_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02025;old_locus_tag=CCO35_02025 NZ_NPME01000001.1 Protein Homology CDS 394657 394968 . - 0 ID=cds-WP_000487129.1;Parent=gene-CCO35_RS02025;Dbxref=GenBank:WP_000487129.1;Name=WP_000487129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=CCO35_RS02025;product=hypothetical protein;protein_id=WP_000487129.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 395037 395288 . - . ID=gene-CCO35_RS02030;Name=CCO35_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02030;old_locus_tag=CCO35_02030 NZ_NPME01000001.1 Protein Homology CDS 395037 395288 . - 0 ID=cds-WP_000673492.1;Parent=gene-CCO35_RS02030;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=CCO35_RS02030;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 395484 395582 . + . ID=gene-CCO35_RS02035;Name=CCO35_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02035;old_locus_tag=CCO35_02035 NZ_NPME01000001.1 Protein Homology CDS 395484 395582 . + 0 ID=cds-WP_001589065.1;Parent=gene-CCO35_RS02035;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=CCO35_RS02035;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 395721 395969 . - . ID=gene-CCO35_RS02040;Name=CCO35_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02040;old_locus_tag=CCO35_02040 NZ_NPME01000001.1 Protein Homology CDS 395721 395969 . - 0 ID=cds-WP_000512149.1;Parent=gene-CCO35_RS02040;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=CCO35_RS02040;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 396283 396924 . - . ID=gene-CCO35_RS02050;Name=CCO35_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02050;old_locus_tag=CCO35_02050 NZ_NPME01000001.1 Protein Homology CDS 396283 396924 . - 0 ID=cds-WP_000762774.1;Parent=gene-CCO35_RS02050;Dbxref=GenBank:WP_000762774.1;Name=WP_000762774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=CCO35_RS02050;product=hypothetical protein;protein_id=WP_000762774.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 397154 397336 . - . ID=gene-CCO35_RS02055;Name=CCO35_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02055;old_locus_tag=CCO35_02055 NZ_NPME01000001.1 Protein Homology CDS 397154 397336 . - 0 ID=cds-WP_000513733.1;Parent=gene-CCO35_RS02055;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=CCO35_RS02055;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 397339 397701 . - . ID=gene-CCO35_RS02060;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=CCO35_RS02060;old_locus_tag=CCO35_02060 NZ_NPME01000001.1 Protein Homology CDS 397339 397701 . - 0 ID=cds-WP_001248993.1;Parent=gene-CCO35_RS02060;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=CCO35_RS02060;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 397874 398512 . - . ID=gene-CCO35_RS02070;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=CCO35_RS02070;old_locus_tag=CCO35_02070 NZ_NPME01000001.1 Protein Homology CDS 397874 398512 . - 0 ID=cds-WP_000457186.1;Parent=gene-CCO35_RS02070;Dbxref=GenBank:WP_000457186.1;Name=WP_000457186.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=CCO35_RS02070;product=leucine efflux protein LeuE;protein_id=WP_000457186.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 398709 399254 . - . ID=gene-CCO35_RS02075;Name=CCO35_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02075;old_locus_tag=CCO35_02075 NZ_NPME01000001.1 Protein Homology CDS 398709 399254 . - 0 ID=cds-WP_000617984.1;Parent=gene-CCO35_RS02075;Dbxref=GenBank:WP_000617984.1;Name=WP_000617984.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=CCO35_RS02075;product=chorismate mutase;protein_id=WP_000617984.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 399337 399491 . + . ID=gene-CCO35_RS23900;Name=CCO35_RS23900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23900;old_locus_tag=CCO35_02080;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 399337 399491 . + 0 ID=cds-CCO35_RS23900;Parent=gene-CCO35_RS23900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=CCO35_RS23900;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 399570 399818 . + . ID=gene-CCO35_RS02085;Name=CCO35_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02085;old_locus_tag=CCO35_02085 NZ_NPME01000001.1 Protein Homology CDS 399570 399818 . + 0 ID=cds-WP_000208086.1;Parent=gene-CCO35_RS02085;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=CCO35_RS02085;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 400073 400921 . - . ID=gene-CCO35_RS02095;Name=CCO35_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02095;old_locus_tag=CCO35_02095 NZ_NPME01000001.1 Protein Homology CDS 400073 400921 . - 0 ID=cds-WP_000190269.1;Parent=gene-CCO35_RS02095;Dbxref=GenBank:WP_000190269.1;Name=WP_000190269.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=CCO35_RS02095;product=MerR family transcriptional regulator;protein_id=WP_000190269.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 400990 401583 . - . ID=gene-CCO35_RS02100;Name=CCO35_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02100;old_locus_tag=CCO35_02100 NZ_NPME01000001.1 Protein Homology CDS 400990 401583 . - 0 ID=cds-WP_072275082.1;Parent=gene-CCO35_RS02100;Dbxref=GenBank:WP_072275082.1;Name=WP_072275082.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=CCO35_RS02100;product=helix-turn-helix domain-containing protein;protein_id=WP_072275082.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 401728 402516 . - . ID=gene-CCO35_RS02105;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=CCO35_RS02105;old_locus_tag=CCO35_02105 NZ_NPME01000001.1 Protein Homology CDS 401728 402516 . - 0 ID=cds-WP_023136870.1;Parent=gene-CCO35_RS02105;Dbxref=GenBank:WP_023136870.1;Name=WP_023136870.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=CCO35_RS02105;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_023136870.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 402625 403272 . - . ID=gene-CCO35_RS02110;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=CCO35_RS02110;old_locus_tag=CCO35_02110 NZ_NPME01000001.1 Protein Homology CDS 402625 403272 . - 0 ID=cds-WP_001537483.1;Parent=gene-CCO35_RS02110;Dbxref=GenBank:WP_001537483.1;Name=WP_001537483.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=CCO35_RS02110;product=metal-binding protein ZinT;protein_id=WP_001537483.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 403384 403460 . - . ID=gene-CCO35_RS02115;Name=CCO35_RS02115;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS02115;old_locus_tag=CCO35_02115 NZ_NPME01000001.1 tRNAscan-SE tRNA 403384 403460 . - . ID=rna-CCO35_RS02115;Parent=gene-CCO35_RS02115;anticodon=(pos:complement(403424..403426));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS02115;product=tRNA-Arg NZ_NPME01000001.1 tRNAscan-SE exon 403384 403460 . - . ID=exon-CCO35_RS02115-1;Parent=rna-CCO35_RS02115;anticodon=(pos:complement(403424..403426));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS02115;product=tRNA-Arg NZ_NPME01000001.1 RefSeq gene 403469 403795 . - . ID=gene-CCO35_RS02120;Name=CCO35_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02120;old_locus_tag=CCO35_02120 NZ_NPME01000001.1 Protein Homology CDS 403469 403795 . - 0 ID=cds-WP_001183699.1;Parent=gene-CCO35_RS02120;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=CCO35_RS02120;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 403989 405122 . + . ID=gene-CCO35_RS02125;Name=CCO35_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02125;old_locus_tag=CCO35_02125 NZ_NPME01000001.1 Protein Homology CDS 403989 405122 . + 0 ID=cds-WP_000456065.1;Parent=gene-CCO35_RS02125;Dbxref=GenBank:WP_000456065.1;Name=WP_000456065.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=CCO35_RS02125;product=mechanosensitive ion channel family protein;protein_id=WP_000456065.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 405204 405794 . - . ID=gene-CCO35_RS02130;Name=CCO35_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02130;old_locus_tag=CCO35_02130 NZ_NPME01000001.1 Protein Homology CDS 405204 405794 . - 0 ID=cds-WP_000947448.1;Parent=gene-CCO35_RS02130;Dbxref=GenBank:WP_000947448.1;Name=WP_000947448.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=CCO35_RS02130;product=ATP-binding cassette domain-containing protein;protein_id=WP_000947448.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 405788 406585 . - . ID=gene-CCO35_RS02135;Name=CCO35_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02135;old_locus_tag=CCO35_02135 NZ_NPME01000001.1 Protein Homology CDS 405788 406585 . - 0 ID=cds-WP_000950208.1;Parent=gene-CCO35_RS02135;Dbxref=GenBank:WP_000950208.1;Name=WP_000950208.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=CCO35_RS02135;product=ATP-binding cassette domain-containing protein;protein_id=WP_000950208.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 406579 407391 . - . ID=gene-CCO35_RS02140;Name=CCO35_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02140;old_locus_tag=CCO35_02140 NZ_NPME01000001.1 Protein Homology CDS 406579 407391 . - 0 ID=cds-WP_000966647.1;Parent=gene-CCO35_RS02140;Dbxref=GenBank:WP_000966647.1;Name=WP_000966647.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=CCO35_RS02140;product=ABC transporter permease;protein_id=WP_000966647.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 407381 408355 . - . ID=gene-CCO35_RS02145;Name=CCO35_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02145;old_locus_tag=CCO35_02145 NZ_NPME01000001.1 Protein Homology CDS 407381 408355 . - 0 ID=cds-WP_001611887.1;Parent=gene-CCO35_RS02145;Dbxref=GenBank:WP_001611887.1;Name=WP_001611887.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=CCO35_RS02145;product=ABC transporter permease;protein_id=WP_001611887.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 408355 409989 . - . ID=gene-CCO35_RS02150;Name=CCO35_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02150;old_locus_tag=CCO35_02150 NZ_NPME01000001.1 Protein Homology CDS 408355 409989 . - 0 ID=cds-WP_000946070.1;Parent=gene-CCO35_RS02150;Dbxref=GenBank:WP_000946070.1;Name=WP_000946070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=CCO35_RS02150;product=ABC transporter substrate-binding protein;protein_id=WP_000946070.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 410671 410985 . + . ID=gene-CCO35_RS02155;Name=CCO35_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02155;old_locus_tag=CCO35_02155 NZ_NPME01000001.1 Protein Homology CDS 410671 410985 . + 0 ID=cds-WP_000182479.1;Parent=gene-CCO35_RS02155;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=CCO35_RS02155;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 411134 411664 . + . ID=gene-CCO35_RS02160;Name=CCO35_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02160;old_locus_tag=CCO35_02160 NZ_NPME01000001.1 Protein Homology CDS 411134 411664 . + 0 ID=cds-WP_000929976.1;Parent=gene-CCO35_RS02160;Dbxref=GenBank:WP_000929976.1;Name=WP_000929976.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=CCO35_RS02160;product=cytochrome b;protein_id=WP_000929976.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 411747 412790 . - . ID=gene-CCO35_RS02165;Name=CCO35_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02165;old_locus_tag=CCO35_02165 NZ_NPME01000001.1 Protein Homology CDS 411747 412790 . - 0 ID=cds-WP_023136874.1;Parent=gene-CCO35_RS02165;Dbxref=GenBank:WP_023136874.1;Name=WP_023136874.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=CCO35_RS02165;product=sialidase family protein;protein_id=WP_023136874.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 413129 413596 . - . ID=gene-CCO35_RS02175;Name=CCO35_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02175;old_locus_tag=CCO35_02175 NZ_NPME01000001.1 Protein Homology CDS 413129 413596 . - 0 ID=cds-WP_001218118.1;Parent=gene-CCO35_RS02175;Dbxref=GenBank:WP_001218118.1;Name=WP_001218118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=CCO35_RS02175;product=Hsp20 family protein;protein_id=WP_001218118.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 413791 414021 . - . ID=gene-CCO35_RS02180;Name=CCO35_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02180;old_locus_tag=CCO35_02180 NZ_NPME01000001.1 Protein Homology CDS 413791 414021 . - 0 ID=cds-WP_077909914.1;Parent=gene-CCO35_RS02180;Dbxref=GenBank:WP_077909914.1;Name=WP_077909914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=CCO35_RS02180;product=hypothetical protein;protein_id=WP_077909914.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 414233 414358 . - . ID=gene-CCO35_RS24185;Name=CCO35_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24185;old_locus_tag=CCO35_02185 NZ_NPME01000001.1 Protein Homology CDS 414233 414358 . - 0 ID=cds-WP_000758944.1;Parent=gene-CCO35_RS24185;Dbxref=GenBank:WP_000758944.1;Name=WP_000758944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000758943.1;locus_tag=CCO35_RS24185;product=hypothetical protein;protein_id=WP_000758944.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 414736 415080 . + . ID=gene-CCO35_RS02190;Name=CCO35_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02190;old_locus_tag=CCO35_02190 NZ_NPME01000001.1 Protein Homology CDS 414736 415080 . + 0 ID=cds-WP_000977725.1;Parent=gene-CCO35_RS02190;Dbxref=GenBank:WP_000977725.1;Name=WP_000977725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=CCO35_RS02190;product=c-type lysozyme inhibitor;protein_id=WP_000977725.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 415835 415911 . - . ID=gene-CCO35_RS02195;Name=CCO35_RS02195;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS02195;old_locus_tag=CCO35_02195 NZ_NPME01000001.1 tRNAscan-SE tRNA 415835 415911 . - . ID=rna-CCO35_RS02195;Parent=gene-CCO35_RS02195;anticodon=(pos:complement(415875..415877));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS02195;product=tRNA-Arg NZ_NPME01000001.1 tRNAscan-SE exon 415835 415911 . - . ID=exon-CCO35_RS02195-1;Parent=rna-CCO35_RS02195;anticodon=(pos:complement(415875..415877));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS02195;product=tRNA-Arg NZ_NPME01000001.1 RefSeq gene 416317 416874 . - . ID=gene-CCO35_RS02200;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=CCO35_RS02200;old_locus_tag=CCO35_02200 NZ_NPME01000001.1 Protein Homology CDS 416317 416874 . - 0 ID=cds-WP_000789469.1;Parent=gene-CCO35_RS02200;Dbxref=GenBank:WP_000789469.1;Name=WP_000789469.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=CCO35_RS02200;product=virulence membrane protein PagC;protein_id=WP_000789469.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 417681 417944 . + . ID=gene-CCO35_RS02215;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=CCO35_RS02215;old_locus_tag=CCO35_02215 NZ_NPME01000001.1 Protein Homology CDS 417681 417944 . + 0 ID=cds-WP_001605721.1;Parent=gene-CCO35_RS02215;Dbxref=GenBank:WP_001605721.1;Name=WP_001605721.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=CCO35_RS02215;product=virulence protein PagD;protein_id=WP_001605721.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 418076 418288 . + . ID=gene-CCO35_RS02220;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=CCO35_RS02220;old_locus_tag=CCO35_02220 NZ_NPME01000001.1 Protein Homology CDS 418076 418288 . + 0 ID=cds-WP_001537306.1;Parent=gene-CCO35_RS02220;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=CCO35_RS02220;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 418705 419226 . + . ID=gene-CCO35_RS02225;Name=CCO35_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02225;old_locus_tag=CCO35_02225 NZ_NPME01000001.1 Protein Homology CDS 418705 419226 . + 0 ID=cds-WP_001542631.1;Parent=gene-CCO35_RS02225;Dbxref=GenBank:WP_001542631.1;Name=WP_001542631.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=CCO35_RS02225;product=RICIN domain-containing protein;protein_id=WP_001542631.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 419417 419656 . + . ID=gene-CCO35_RS02230;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=CCO35_RS02230;old_locus_tag=CCO35_02230 NZ_NPME01000001.1 Protein Homology CDS 419417 419656 . + 0 ID=cds-WP_000497451.1;Parent=gene-CCO35_RS02230;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=CCO35_RS02230;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 419806 419892 . - . ID=gene-CCO35_RS24265;Name=CCO35_RS24265;end_range=419892,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24265;partial=true;pseudo=true;start_range=.,419806 NZ_NPME01000001.1 Protein Homology CDS 419806 419892 . - 0 ID=cds-CCO35_RS24265;Parent=gene-CCO35_RS24265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=419892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001034099.1;locus_tag=CCO35_RS24265;partial=true;product=hypothetical protein;pseudo=true;start_range=.,419806;transl_table=11 NZ_NPME01000001.1 RefSeq gene 419867 420031 . - . ID=gene-CCO35_RS23770;Name=CCO35_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23770;old_locus_tag=CCO35_02235 NZ_NPME01000001.1 GeneMarkS-2+ CDS 419867 420031 . - 0 ID=cds-WP_001036547.1;Parent=gene-CCO35_RS23770;Dbxref=GenBank:WP_001036547.1;Name=WP_001036547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS23770;product=hypothetical protein;protein_id=WP_001036547.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 420529 421338 . + . ID=gene-CCO35_RS02240;Name=cdtB;gbkey=Gene;gene=cdtB;gene_biotype=protein_coding;locus_tag=CCO35_RS02240;old_locus_tag=CCO35_02240 NZ_NPME01000001.1 Protein Homology CDS 420529 421338 . + 0 ID=cds-WP_001529135.1;Parent=gene-CCO35_RS02240;Dbxref=GenBank:WP_001529135.1;Name=WP_001529135.1;gbkey=CDS;gene=cdtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529135.1;locus_tag=CCO35_RS02240;product=cytolethal distending toxin S-CDT;protein_id=WP_001529135.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 421411 421788 . + . ID=gene-CCO35_RS02245;Name=CCO35_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02245;old_locus_tag=CCO35_02245 NZ_NPME01000001.1 Protein Homology CDS 421411 421788 . + 0 ID=cds-WP_001277616.1;Parent=gene-CCO35_RS02245;Dbxref=GenBank:WP_001277616.1;Name=WP_001277616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277616.1;locus_tag=CCO35_RS02245;product=DUF1353 domain-containing protein;protein_id=WP_001277616.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 421936 422478 . - . ID=gene-CCO35_RS02250;Name=CCO35_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02250;old_locus_tag=CCO35_02250 NZ_NPME01000001.1 Protein Homology CDS 421936 422478 . - 0 ID=cds-WP_000158845.1;Parent=gene-CCO35_RS02250;Dbxref=GenBank:WP_000158845.1;Name=WP_000158845.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016429.1;locus_tag=CCO35_RS02250;product=glycoside hydrolase family 108 protein;protein_id=WP_000158845.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 422662 423390 . - . ID=gene-CCO35_RS02255;Name=pltA;gbkey=Gene;gene=pltA;gene_biotype=protein_coding;locus_tag=CCO35_RS02255;old_locus_tag=CCO35_02255 NZ_NPME01000001.1 Protein Homology CDS 422662 423390 . - 0 ID=cds-WP_000733630.1;Parent=gene-CCO35_RS02255;Dbxref=GenBank:WP_000733630.1;Name=WP_000733630.1;gbkey=CDS;gene=pltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766395.1;locus_tag=CCO35_RS02255;product=typhoid-like toxin S-CDT ADP-ribosylating subunit PltA;protein_id=WP_000733630.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 423407 423820 . - . ID=gene-CCO35_RS02260;Name=pltB;gbkey=Gene;gene=pltB;gene_biotype=protein_coding;locus_tag=CCO35_RS02260;old_locus_tag=CCO35_02260 NZ_NPME01000001.1 Protein Homology CDS 423407 423820 . - 0 ID=cds-WP_000275697.1;Parent=gene-CCO35_RS02260;Dbxref=GenBank:WP_000275697.1;Name=WP_000275697.1;gbkey=CDS;gene=pltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281950.1;locus_tag=CCO35_RS02260;product=typhoid-like toxin S-CDT binding subunit PltB;protein_id=WP_000275697.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 424432 424577 . + . ID=gene-CCO35_RS23905;Name=CCO35_RS23905;end_range=424577,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23905;partial=true;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 424432 424577 . + 0 ID=cds-CCO35_RS23905;Parent=gene-CCO35_RS23905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=424577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=CCO35_RS23905;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 424594 424674 . - . ID=gene-CCO35_RS23910;Name=CCO35_RS23910;end_range=424674,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23910;partial=true;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 424594 424674 . - 0 ID=cds-CCO35_RS23910;Parent=gene-CCO35_RS23910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=424674,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505044.1;locus_tag=CCO35_RS23910;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 424865 425989 . - . ID=gene-CCO35_RS02270;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=CCO35_RS02270;old_locus_tag=CCO35_02270 NZ_NPME01000001.1 Protein Homology CDS 424865 425989 . - 0 ID=cds-WP_023136605.1;Parent=gene-CCO35_RS02270;Dbxref=GenBank:WP_023136605.1;Name=WP_023136605.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=CCO35_RS02270;product=type III secretion system effector SopF;protein_id=WP_023136605.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 426437 427687 . - . ID=gene-CCO35_RS02275;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CCO35_RS02275;old_locus_tag=CCO35_02275 NZ_NPME01000001.1 Protein Homology CDS 426437 427687 . - 0 ID=cds-WP_000444508.1;Parent=gene-CCO35_RS02275;Dbxref=GenBank:WP_000444508.1;Name=WP_000444508.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=CCO35_RS02275;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444508.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 427859 428524 . + . ID=gene-CCO35_RS02280;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=CCO35_RS02280;old_locus_tag=CCO35_02280 NZ_NPME01000001.1 Protein Homology CDS 427859 428524 . + 0 ID=cds-WP_001249415.1;Parent=gene-CCO35_RS02280;Dbxref=GenBank:WP_001249415.1;Name=WP_001249415.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=CCO35_RS02280;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249415.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 428521 428850 . + . ID=gene-CCO35_RS02285;Name=CCO35_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02285;old_locus_tag=CCO35_02285 NZ_NPME01000001.1 Protein Homology CDS 428521 428850 . + 0 ID=cds-WP_000825956.1;Parent=gene-CCO35_RS02285;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=CCO35_RS02285;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 428862 429323 . + . ID=gene-CCO35_RS02290;Name=CCO35_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02290;old_locus_tag=CCO35_02290 NZ_NPME01000001.1 Protein Homology CDS 428862 429323 . + 0 ID=cds-WP_094965304.1;Parent=gene-CCO35_RS02290;Dbxref=GenBank:WP_094965304.1;Name=WP_094965304.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=CCO35_RS02290;product=NUDIX hydrolase;protein_id=WP_094965304.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 429377 430483 . + . ID=gene-CCO35_RS02295;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=CCO35_RS02295;old_locus_tag=CCO35_02295 NZ_NPME01000001.1 Protein Homology CDS 429377 430483 . + 0 ID=cds-WP_000004540.1;Parent=gene-CCO35_RS02295;Dbxref=GenBank:WP_000004540.1;Name=WP_000004540.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=CCO35_RS02295;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_000004540.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 430570 431211 . + . ID=gene-CCO35_RS02300;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=CCO35_RS02300;old_locus_tag=CCO35_02300 NZ_NPME01000001.1 Protein Homology CDS 430570 431211 . + 0 ID=cds-WP_001519653.1;Parent=gene-CCO35_RS02300;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=CCO35_RS02300;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 431215 432585 . + . ID=gene-CCO35_RS02305;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CCO35_RS02305;old_locus_tag=CCO35_02305 NZ_NPME01000001.1 Protein Homology CDS 431215 432585 . + 0 ID=cds-WP_023136607.1;Parent=gene-CCO35_RS02305;Dbxref=GenBank:WP_023136607.1;Name=WP_023136607.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=CCO35_RS02305;product=adenylosuccinate lyase;protein_id=WP_023136607.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 432712 433383 . + . ID=gene-CCO35_RS02310;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=CCO35_RS02310;old_locus_tag=CCO35_02310 NZ_NPME01000001.1 Protein Homology CDS 432712 433383 . + 0 ID=cds-WP_001537766.1;Parent=gene-CCO35_RS02310;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=CCO35_RS02310;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 433383 434846 . + . ID=gene-CCO35_RS02315;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=CCO35_RS02315;old_locus_tag=CCO35_02315 NZ_NPME01000001.1 Protein Homology CDS 433383 434846 . + 0 ID=cds-WP_001031687.1;Parent=gene-CCO35_RS02315;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=CCO35_RS02315;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 434927 436048 . + . ID=gene-CCO35_RS02320;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=CCO35_RS02320;old_locus_tag=CCO35_02320 NZ_NPME01000001.1 Protein Homology CDS 434927 436048 . + 0 ID=cds-WP_000456514.1;Parent=gene-CCO35_RS02320;Dbxref=GenBank:WP_000456514.1;Name=WP_000456514.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=CCO35_RS02320;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_000456514.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 436088 437422 . - . ID=gene-CCO35_RS02325;Name=CCO35_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02325;old_locus_tag=CCO35_02325 NZ_NPME01000001.1 Protein Homology CDS 436088 437422 . - 0 ID=cds-WP_023136608.1;Parent=gene-CCO35_RS02325;Dbxref=GenBank:WP_023136608.1;Name=WP_023136608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=CCO35_RS02325;product=hypothetical protein;protein_id=WP_023136608.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 437426 438655 . - . ID=gene-CCO35_RS02330;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CCO35_RS02330;old_locus_tag=CCO35_02330 NZ_NPME01000001.1 Protein Homology CDS 437426 438655 . - 0 ID=cds-WP_000359410.1;Parent=gene-CCO35_RS02330;Dbxref=GenBank:WP_000359410.1;Name=WP_000359410.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=CCO35_RS02330;product=peptidase T;protein_id=WP_000359410.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 438906 440042 . + . ID=gene-CCO35_RS02340;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=CCO35_RS02340;old_locus_tag=CCO35_02340 NZ_NPME01000001.1 Protein Homology CDS 438906 440042 . + 0 ID=cds-WP_000531582.1;Parent=gene-CCO35_RS02340;Dbxref=GenBank:WP_000531582.1;Name=WP_000531582.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=CCO35_RS02340;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531582.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 440026 440889 . + . ID=gene-CCO35_RS02345;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=CCO35_RS02345;old_locus_tag=CCO35_02345 NZ_NPME01000001.1 Protein Homology CDS 440026 440889 . + 0 ID=cds-WP_000799391.1;Parent=gene-CCO35_RS02345;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=CCO35_RS02345;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 441218 442228 . + . ID=gene-CCO35_RS02350;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=CCO35_RS02350;old_locus_tag=CCO35_02350 NZ_NPME01000001.1 Protein Homology CDS 441218 442228 . + 0 ID=cds-WP_001611910.1;Parent=gene-CCO35_RS02350;Dbxref=GenBank:WP_001611910.1;Name=WP_001611910.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=CCO35_RS02350;product=SPI-2 type III secretion system effector SifA;protein_id=WP_001611910.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 442544 443323 . + . ID=gene-CCO35_RS02355;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=CCO35_RS02355;old_locus_tag=CCO35_02355 NZ_NPME01000001.1 Protein Homology CDS 442544 443323 . + 0 ID=cds-WP_000580299.1;Parent=gene-CCO35_RS02355;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=CCO35_RS02355;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 443348 444394 . + . ID=gene-CCO35_RS02360;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=CCO35_RS02360;old_locus_tag=CCO35_02360 NZ_NPME01000001.1 Protein Homology CDS 443348 444394 . + 0 ID=cds-WP_000759329.1;Parent=gene-CCO35_RS02360;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=CCO35_RS02360;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 444476 445297 . - . ID=gene-CCO35_RS02365;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=CCO35_RS02365;old_locus_tag=CCO35_02365 NZ_NPME01000001.1 Protein Homology CDS 444476 445297 . - 0 ID=cds-WP_001191856.1;Parent=gene-CCO35_RS02365;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=CCO35_RS02365;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 445315 446226 . - . ID=gene-CCO35_RS02370;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=CCO35_RS02370;old_locus_tag=CCO35_02370 NZ_NPME01000001.1 Protein Homology CDS 445315 446226 . - 0 ID=cds-WP_000291325.1;Parent=gene-CCO35_RS02370;Dbxref=GenBank:WP_000291325.1;Name=WP_000291325.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=CCO35_RS02370;product=N-acetylglucosamine kinase;protein_id=WP_000291325.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 446255 447499 . - . ID=gene-CCO35_RS02375;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=CCO35_RS02375;old_locus_tag=CCO35_02375 NZ_NPME01000001.1 Protein Homology CDS 446255 447499 . - 0 ID=cds-WP_000168096.1;Parent=gene-CCO35_RS02375;Dbxref=GenBank:WP_000168096.1;Name=WP_000168096.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=CCO35_RS02375;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168096.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 447499 448200 . - . ID=gene-CCO35_RS02380;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=CCO35_RS02380;old_locus_tag=CCO35_02380 NZ_NPME01000001.1 Protein Homology CDS 447499 448200 . - 0 ID=cds-WP_001033714.1;Parent=gene-CCO35_RS02380;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=CCO35_RS02380;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 448193 449392 . - . ID=gene-CCO35_RS02385;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=CCO35_RS02385;old_locus_tag=CCO35_02385 NZ_NPME01000001.1 Protein Homology CDS 448193 449392 . - 0 ID=cds-WP_001518787.1;Parent=gene-CCO35_RS02385;Dbxref=GenBank:WP_001518787.1;Name=WP_001518787.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=CCO35_RS02385;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001518787.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 449730 453176 . + . ID=gene-CCO35_RS02390;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CCO35_RS02390;old_locus_tag=CCO35_02390 NZ_NPME01000001.1 Protein Homology CDS 449730 453176 . + 0 ID=cds-WP_001529152.1;Parent=gene-CCO35_RS02390;Dbxref=GenBank:WP_001529152.1;Name=WP_001529152.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=CCO35_RS02390;product=transcription-repair coupling factor;protein_id=WP_001529152.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 453324 454289 . + . ID=gene-CCO35_RS02395;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=CCO35_RS02395;old_locus_tag=CCO35_02395 NZ_NPME01000001.1 Protein Homology CDS 453324 454289 . + 0 ID=cds-WP_094965305.1;Parent=gene-CCO35_RS02395;Dbxref=GenBank:WP_094965305.1;Name=WP_094965305.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=CCO35_RS02395;product=L%2CD-transpeptidase LdtC;protein_id=WP_094965305.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 454386 454643 . - . ID=gene-CCO35_RS02400;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=CCO35_RS02400;old_locus_tag=CCO35_02400 NZ_NPME01000001.1 Protein Homology CDS 454386 454643 . - 0 ID=cds-WP_000706734.1;Parent=gene-CCO35_RS02400;Dbxref=GenBank:WP_000706734.1;Name=WP_000706734.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=CCO35_RS02400;product=multiple stress resistance protein BhsA;protein_id=WP_000706734.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 454885 455520 . + . ID=gene-CCO35_RS02405;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=CCO35_RS02405;old_locus_tag=CCO35_02405 NZ_NPME01000001.1 Protein Homology CDS 454885 455520 . + 0 ID=cds-WP_000205986.1;Parent=gene-CCO35_RS02405;Dbxref=GenBank:WP_000205986.1;Name=WP_000205986.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=CCO35_RS02405;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205986.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 455594 456133 . - . ID=gene-CCO35_RS02410;Name=CCO35_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02410;old_locus_tag=CCO35_02410 NZ_NPME01000001.1 Protein Homology CDS 455594 456133 . - 0 ID=cds-WP_001043449.1;Parent=gene-CCO35_RS02410;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=CCO35_RS02410;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 456312 457616 . - . ID=gene-CCO35_RS02415;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=CCO35_RS02415;old_locus_tag=CCO35_02415 NZ_NPME01000001.1 Protein Homology CDS 456312 457616 . - 0 ID=cds-WP_000211053.1;Parent=gene-CCO35_RS02415;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=CCO35_RS02415;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 457870 458412 . - . ID=gene-CCO35_RS02420;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=CCO35_RS02420;old_locus_tag=CCO35_02420 NZ_NPME01000001.1 Protein Homology CDS 457870 458412 . - 0 ID=cds-WP_000587945.1;Parent=gene-CCO35_RS02420;Dbxref=GenBank:WP_000587945.1;Name=WP_000587945.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=CCO35_RS02420;product=alpha/beta hydrolase YcfP;protein_id=WP_000587945.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 458437 459462 . - . ID=gene-CCO35_RS02425;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=CCO35_RS02425;old_locus_tag=CCO35_02425 NZ_NPME01000001.1 Protein Homology CDS 458437 459462 . - 0 ID=cds-WP_000529336.1;Parent=gene-CCO35_RS02425;Dbxref=GenBank:WP_000529336.1;Name=WP_000529336.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=CCO35_RS02425;product=beta-N-acetylhexosaminidase;protein_id=WP_000529336.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 459473 460297 . - . ID=gene-CCO35_RS02430;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=CCO35_RS02430;old_locus_tag=CCO35_02430 NZ_NPME01000001.1 Protein Homology CDS 459473 460297 . - 0 ID=cds-WP_001257340.1;Parent=gene-CCO35_RS02430;Dbxref=GenBank:WP_001257340.1;Name=WP_001257340.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=CCO35_RS02430;product=thiamine kinase;protein_id=WP_001257340.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 460278 460916 . - . ID=gene-CCO35_RS02435;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=CCO35_RS02435;old_locus_tag=CCO35_02435 NZ_NPME01000001.1 Protein Homology CDS 460278 460916 . - 0 ID=cds-WP_000164359.1;Parent=gene-CCO35_RS02435;Dbxref=GenBank:WP_000164359.1;Name=WP_000164359.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=CCO35_RS02435;product=penicillin-binding protein activator LpoB;protein_id=WP_000164359.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 460930 461304 . - . ID=gene-CCO35_RS02440;Name=CCO35_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02440;old_locus_tag=CCO35_02440 NZ_NPME01000001.1 Protein Homology CDS 460930 461304 . - 0 ID=cds-WP_000589563.1;Parent=gene-CCO35_RS02440;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=CCO35_RS02440;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 461307 461666 . - . ID=gene-CCO35_RS02445;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=CCO35_RS02445;old_locus_tag=CCO35_02445 NZ_NPME01000001.1 Protein Homology CDS 461307 461666 . - 0 ID=cds-WP_001532068.1;Parent=gene-CCO35_RS02445;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=CCO35_RS02445;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 462008 464182 . + . ID=gene-CCO35_RS02450;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=CCO35_RS02450;old_locus_tag=CCO35_02450 NZ_NPME01000001.1 Protein Homology CDS 462008 464182 . + 0 ID=cds-WP_023232973.1;Parent=gene-CCO35_RS02450;Dbxref=GenBank:WP_023232973.1;Name=WP_023232973.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=CCO35_RS02450;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_023232973.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 464267 465700 . - . ID=gene-CCO35_RS02455;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CCO35_RS02455;old_locus_tag=CCO35_02455 NZ_NPME01000001.1 Protein Homology CDS 464267 465700 . - 0 ID=cds-WP_000475705.1;Parent=gene-CCO35_RS02455;Dbxref=GenBank:WP_000475705.1;Name=WP_000475705.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=CCO35_RS02455;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475705.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 465995 466792 . - . ID=gene-CCO35_RS02460;Name=CCO35_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02460;old_locus_tag=CCO35_02460 NZ_NPME01000001.1 Protein Homology CDS 465995 466792 . - 0 ID=cds-WP_000480268.1;Parent=gene-CCO35_RS02460;Dbxref=GenBank:WP_000480268.1;Name=WP_000480268.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=CCO35_RS02460;product=metal-dependent hydrolase;protein_id=WP_000480268.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 466803 467807 . - . ID=gene-CCO35_RS02465;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=CCO35_RS02465;old_locus_tag=CCO35_02465 NZ_NPME01000001.1 Protein Homology CDS 466803 467807 . - 0 ID=cds-WP_000872450.1;Parent=gene-CCO35_RS02465;Dbxref=GenBank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=CCO35_RS02465;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 467804 468445 . - . ID=gene-CCO35_RS02470;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CCO35_RS02470;old_locus_tag=CCO35_02470 NZ_NPME01000001.1 Protein Homology CDS 467804 468445 . - 0 ID=cds-WP_000535395.1;Parent=gene-CCO35_RS02470;Dbxref=GenBank:WP_000535395.1;Name=WP_000535395.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=CCO35_RS02470;product=dTMP kinase;protein_id=WP_000535395.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 468435 469457 . - . ID=gene-CCO35_RS02475;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=CCO35_RS02475;old_locus_tag=CCO35_02475 NZ_NPME01000001.1 Protein Homology CDS 468435 469457 . - 0 ID=cds-WP_000736471.1;Parent=gene-CCO35_RS02475;Dbxref=GenBank:WP_000736471.1;Name=WP_000736471.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=CCO35_RS02475;product=cell division protein YceG;protein_id=WP_000736471.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 469460 470269 . - . ID=gene-CCO35_RS02480;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=CCO35_RS02480;old_locus_tag=CCO35_02480 NZ_NPME01000001.1 Protein Homology CDS 469460 470269 . - 0 ID=cds-WP_000280843.1;Parent=gene-CCO35_RS02480;Dbxref=GenBank:WP_000280843.1;Name=WP_000280843.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=CCO35_RS02480;product=aminodeoxychorismate lyase;protein_id=WP_000280843.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 470684 471226 . + . ID=gene-CCO35_RS02485;Name=CCO35_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02485;old_locus_tag=CCO35_02485 NZ_NPME01000001.1 Protein Homology CDS 470684 471226 . + 0 ID=cds-WP_000676517.1;Parent=gene-CCO35_RS02485;Dbxref=GenBank:WP_000676517.1;Name=WP_000676517.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405985.1;locus_tag=CCO35_RS02485;product=fimbrial protein;protein_id=WP_000676517.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 471302 471979 . + . ID=gene-CCO35_RS02490;Name=CCO35_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02490;old_locus_tag=CCO35_02490 NZ_NPME01000001.1 Protein Homology CDS 471302 471979 . + 0 ID=cds-WP_001046274.1;Parent=gene-CCO35_RS02490;Dbxref=GenBank:WP_001046274.1;Name=WP_001046274.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046428.1;locus_tag=CCO35_RS02490;product=fimbrial biogenesis chaperone;protein_id=WP_001046274.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 472003 474558 . + . ID=gene-CCO35_RS02495;Name=CCO35_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02495;old_locus_tag=CCO35_02495 NZ_NPME01000001.1 Protein Homology CDS 472003 474558 . + 0 ID=cds-WP_023220297.1;Parent=gene-CCO35_RS02495;Dbxref=GenBank:WP_023220297.1;Name=WP_023220297.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990584.1;locus_tag=CCO35_RS02495;product=fimbria/pilus outer membrane usher protein;protein_id=WP_023220297.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 474596 475594 . + . ID=gene-CCO35_RS02500;Name=CCO35_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02500;old_locus_tag=CCO35_02500 NZ_NPME01000001.1 Protein Homology CDS 474596 475594 . + 0 ID=cds-WP_000754357.1;Parent=gene-CCO35_RS02500;Dbxref=GenBank:WP_000754357.1;Name=WP_000754357.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754357.1;locus_tag=CCO35_RS02500;product=fimbrial protein;protein_id=WP_000754357.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 475607 476128 . + . ID=gene-CCO35_RS02505;Name=CCO35_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02505;old_locus_tag=CCO35_02505 NZ_NPME01000001.1 Protein Homology CDS 475607 476128 . + 0 ID=cds-WP_012513009.1;Parent=gene-CCO35_RS02505;Dbxref=GenBank:WP_012513009.1;Name=WP_012513009.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012513009.1;locus_tag=CCO35_RS02505;product=fimbrial protein;protein_id=WP_012513009.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 476143 476667 . + . ID=gene-CCO35_RS02510;Name=CCO35_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02510;old_locus_tag=CCO35_02510 NZ_NPME01000001.1 Protein Homology CDS 476143 476667 . + 0 ID=cds-WP_000068580.1;Parent=gene-CCO35_RS02510;Dbxref=GenBank:WP_000068580.1;Name=WP_000068580.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068580.1;locus_tag=CCO35_RS02510;product=fimbrial protein;protein_id=WP_000068580.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 476738 477979 . - . ID=gene-CCO35_RS02515;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CCO35_RS02515;old_locus_tag=CCO35_02515 NZ_NPME01000001.1 Protein Homology CDS 476738 477979 . - 0 ID=cds-WP_000044666.1;Parent=gene-CCO35_RS02515;Dbxref=GenBank:WP_000044666.1;Name=WP_000044666.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=CCO35_RS02515;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044666.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 478065 478301 . - . ID=gene-CCO35_RS02520;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=CCO35_RS02520;old_locus_tag=CCO35_02520 NZ_NPME01000001.1 Protein Homology CDS 478065 478301 . - 0 ID=cds-WP_000103754.1;Parent=gene-CCO35_RS02520;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=CCO35_RS02520;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 478457 479191 . - . ID=gene-CCO35_RS02525;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CCO35_RS02525;old_locus_tag=CCO35_02525 NZ_NPME01000001.1 Protein Homology CDS 478457 479191 . - 0 ID=cds-WP_000007236.1;Parent=gene-CCO35_RS02525;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=CCO35_RS02525;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 479204 480133 . - . ID=gene-CCO35_RS02530;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CCO35_RS02530;old_locus_tag=CCO35_02530 NZ_NPME01000001.1 Protein Homology CDS 479204 480133 . - 0 ID=cds-WP_000191343.1;Parent=gene-CCO35_RS02530;Dbxref=GenBank:WP_000191343.1;Name=WP_000191343.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=CCO35_RS02530;product=ACP S-malonyltransferase;protein_id=WP_000191343.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 480149 481102 . - . ID=gene-CCO35_RS02535;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=CCO35_RS02535;old_locus_tag=CCO35_02535 NZ_NPME01000001.1 Protein Homology CDS 480149 481102 . - 0 ID=cds-WP_000288148.1;Parent=gene-CCO35_RS02535;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=CCO35_RS02535;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 481182 482261 . - . ID=gene-CCO35_RS02540;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CCO35_RS02540;old_locus_tag=CCO35_02540 NZ_NPME01000001.1 Protein Homology CDS 481182 482261 . - 0 ID=cds-WP_001518286.1;Parent=gene-CCO35_RS02540;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=CCO35_RS02540;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 482395 482568 . - . ID=gene-CCO35_RS02545;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CCO35_RS02545;old_locus_tag=CCO35_02545 NZ_NPME01000001.1 Protein Homology CDS 482395 482568 . - 0 ID=cds-WP_000290727.1;Parent=gene-CCO35_RS02545;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=CCO35_RS02545;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 482620 483141 . - . ID=gene-CCO35_RS02550;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=CCO35_RS02550;old_locus_tag=CCO35_02550 NZ_NPME01000001.1 Protein Homology CDS 482620 483141 . - 0 ID=cds-WP_001174492.1;Parent=gene-CCO35_RS02550;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=CCO35_RS02550;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 483339 483923 . + . ID=gene-CCO35_RS02555;Name=CCO35_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02555;old_locus_tag=CCO35_02555 NZ_NPME01000001.1 Protein Homology CDS 483339 483923 . + 0 ID=cds-WP_001137609.1;Parent=gene-CCO35_RS02555;Dbxref=GenBank:WP_001137609.1;Name=WP_001137609.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003836743.1;locus_tag=CCO35_RS02555;product=Maf family protein;protein_id=WP_001137609.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 484006 484959 . - . ID=gene-CCO35_RS02560;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=CCO35_RS02560;old_locus_tag=CCO35_02560 NZ_NPME01000001.1 Protein Homology CDS 484006 484959 . - 0 ID=cds-WP_000846310.1;Parent=gene-CCO35_RS02560;Dbxref=GenBank:WP_000846310.1;Name=WP_000846310.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036228.1;locus_tag=CCO35_RS02560;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846310.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 485533 488736 . + . ID=gene-CCO35_RS02570;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=CCO35_RS02570;old_locus_tag=CCO35_02570 NZ_NPME01000001.1 Protein Homology CDS 485533 488736 . + 0 ID=cds-WP_031565377.1;Parent=gene-CCO35_RS02570;Dbxref=GenBank:WP_031565377.1;Name=WP_031565377.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=CCO35_RS02570;product=ribonuclease E;protein_id=WP_031565377.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 488993 489946 . - . ID=gene-CCO35_RS02575;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=CCO35_RS02575;old_locus_tag=CCO35_02575 NZ_NPME01000001.1 Protein Homology CDS 488993 489946 . - 0 ID=cds-WP_001223032.1;Parent=gene-CCO35_RS02575;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=CCO35_RS02575;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 489961 491622 . - . ID=gene-CCO35_RS02580;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=CCO35_RS02580;old_locus_tag=CCO35_02580 NZ_NPME01000001.1 Protein Homology CDS 489961 491622 . - 0 ID=cds-WP_000096425.1;Parent=gene-CCO35_RS02580;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=CCO35_RS02580;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 491687 492637 . - . ID=gene-CCO35_RS02585;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=CCO35_RS02585;old_locus_tag=CCO35_02585 NZ_NPME01000001.1 Protein Homology CDS 491687 492637 . - 0 ID=cds-WP_000578693.1;Parent=gene-CCO35_RS02585;Dbxref=GenBank:WP_000578693.1;Name=WP_000578693.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=CCO35_RS02585;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578693.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 492637 493734 . - . ID=gene-CCO35_RS02590;Name=CCO35_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02590;old_locus_tag=CCO35_02590 NZ_NPME01000001.1 Protein Homology CDS 492637 493734 . - 0 ID=cds-WP_001518955.1;Parent=gene-CCO35_RS02590;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=CCO35_RS02590;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 493746 494444 . - . ID=gene-CCO35_RS02595;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=CCO35_RS02595;old_locus_tag=CCO35_02595 NZ_NPME01000001.1 Protein Homology CDS 493746 494444 . - 0 ID=cds-WP_001174897.1;Parent=gene-CCO35_RS02595;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=CCO35_RS02595;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 494498 495280 . - . ID=gene-CCO35_RS02600;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=CCO35_RS02600;old_locus_tag=CCO35_02600 NZ_NPME01000001.1 Protein Homology CDS 494498 495280 . - 0 ID=cds-WP_000625851.1;Parent=gene-CCO35_RS02600;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=CCO35_RS02600;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 495294 496049 . - . ID=gene-CCO35_RS02605;Name=CCO35_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02605;old_locus_tag=CCO35_02605 NZ_NPME01000001.1 Protein Homology CDS 495294 496049 . - 0 ID=cds-WP_000349278.1;Parent=gene-CCO35_RS02605;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=CCO35_RS02605;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 496070 497281 . - . ID=gene-CCO35_RS02610;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=CCO35_RS02610;old_locus_tag=CCO35_02610 NZ_NPME01000001.1 Protein Homology CDS 496070 497281 . - 0 ID=cds-WP_000010562.1;Parent=gene-CCO35_RS02610;Dbxref=GenBank:WP_000010562.1;Name=WP_000010562.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=CCO35_RS02610;product=flagellar hook protein FlgE;protein_id=WP_000010562.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 497308 498006 . - . ID=gene-CCO35_RS02615;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=CCO35_RS02615;old_locus_tag=CCO35_02615 NZ_NPME01000001.1 Protein Homology CDS 497308 498006 . - 0 ID=cds-WP_000020450.1;Parent=gene-CCO35_RS02615;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=CCO35_RS02615;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 498018 498422 . - . ID=gene-CCO35_RS02620;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=CCO35_RS02620;old_locus_tag=CCO35_02620 NZ_NPME01000001.1 Protein Homology CDS 498018 498422 . - 0 ID=cds-WP_001196448.1;Parent=gene-CCO35_RS02620;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=CCO35_RS02620;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 498426 498842 . - . ID=gene-CCO35_RS02625;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=CCO35_RS02625;old_locus_tag=CCO35_02625 NZ_NPME01000001.1 Protein Homology CDS 498426 498842 . - 0 ID=cds-WP_000887043.1;Parent=gene-CCO35_RS02625;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=CCO35_RS02625;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 498999 499658 . + . ID=gene-CCO35_RS02635;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=CCO35_RS02635;old_locus_tag=CCO35_02635 NZ_NPME01000001.1 Protein Homology CDS 498999 499658 . + 0 ID=cds-WP_001194091.1;Parent=gene-CCO35_RS02635;Dbxref=GenBank:WP_001194091.1;Name=WP_001194091.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=CCO35_RS02635;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194091.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 499750 500043 . + . ID=gene-CCO35_RS02640;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=CCO35_RS02640;old_locus_tag=CCO35_02640 NZ_NPME01000001.1 Protein Homology CDS 499750 500043 . + 0 ID=cds-WP_000020893.1;Parent=gene-CCO35_RS02640;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=CCO35_RS02640;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 500048 500470 . + . ID=gene-CCO35_RS02645;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=CCO35_RS02645;old_locus_tag=CCO35_02645 NZ_NPME01000001.1 Protein Homology CDS 500048 500470 . + 0 ID=cds-WP_000197547.1;Parent=gene-CCO35_RS02645;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=CCO35_RS02645;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 500552 502087 . - . ID=gene-CCO35_RS02650;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=CCO35_RS02650;old_locus_tag=CCO35_02650 NZ_NPME01000001.1 Protein Homology CDS 500552 502087 . - 0 ID=cds-WP_001537775.1;Parent=gene-CCO35_RS02650;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=CCO35_RS02650;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 502391 503314 . - . ID=gene-CCO35_RS02655;Name=CCO35_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02655;old_locus_tag=CCO35_02655 NZ_NPME01000001.1 Protein Homology CDS 502391 503314 . - 0 ID=cds-WP_031565332.1;Parent=gene-CCO35_RS02655;Dbxref=GenBank:WP_031565332.1;Name=WP_031565332.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=CCO35_RS02655;product=Gfo/Idh/MocA family protein;protein_id=WP_031565332.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 503316 503963 . - . ID=gene-CCO35_RS02660;Name=CCO35_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02660;old_locus_tag=CCO35_02660 NZ_NPME01000001.1 Protein Homology CDS 503316 503963 . - 0 ID=cds-WP_000873047.1;Parent=gene-CCO35_RS02660;Dbxref=GenBank:WP_000873047.1;Name=WP_000873047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=CCO35_RS02660;product=YceH family protein;protein_id=WP_000873047.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 503999 504583 . - . ID=gene-CCO35_RS02665;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=CCO35_RS02665;old_locus_tag=CCO35_02665 NZ_NPME01000001.1 Protein Homology CDS 503999 504583 . - 0 ID=cds-WP_000468204.1;Parent=gene-CCO35_RS02665;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=CCO35_RS02665;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 504820 506028 . + . ID=gene-CCO35_RS02670;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=CCO35_RS02670;old_locus_tag=CCO35_02670 NZ_NPME01000001.1 Protein Homology CDS 504820 506028 . + 0 ID=cds-WP_000092178.1;Parent=gene-CCO35_RS02670;Dbxref=GenBank:WP_000092178.1;Name=WP_000092178.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=CCO35_RS02670;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092178.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 506092 506739 . + . ID=gene-CCO35_RS02675;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=CCO35_RS02675;old_locus_tag=CCO35_02675 NZ_NPME01000001.1 Protein Homology CDS 506092 506739 . + 0 ID=cds-WP_000780893.1;Parent=gene-CCO35_RS02675;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=CCO35_RS02675;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 506864 507424 . + . ID=gene-CCO35_RS02680;Name=CCO35_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02680;old_locus_tag=CCO35_02680 NZ_NPME01000001.1 Protein Homology CDS 506864 507424 . + 0 ID=cds-WP_031565313.1;Parent=gene-CCO35_RS02680;Dbxref=GenBank:WP_031565313.1;Name=WP_031565313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=CCO35_RS02680;product=lipoprotein;protein_id=WP_031565313.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 507528 508574 . + . ID=gene-CCO35_RS02685;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=CCO35_RS02685;old_locus_tag=CCO35_02685 NZ_NPME01000001.1 Protein Homology CDS 507528 508574 . + 0 ID=cds-WP_000126609.1;Parent=gene-CCO35_RS02685;Dbxref=GenBank:WP_000126609.1;Name=WP_000126609.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=CCO35_RS02685;product=dihydroorotase;protein_id=WP_000126609.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 508648 508893 . + . ID=gene-CCO35_RS02690;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=CCO35_RS02690;old_locus_tag=CCO35_02690 NZ_NPME01000001.1 Protein Homology CDS 508648 508893 . + 0 ID=cds-WP_001217763.1;Parent=gene-CCO35_RS02690;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=CCO35_RS02690;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 509183 509437 . + . ID=gene-CCO35_RS02695;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=CCO35_RS02695;old_locus_tag=CCO35_02695 NZ_NPME01000001.1 Protein Homology CDS 509183 509437 . + 0 ID=cds-WP_000414441.1;Parent=gene-CCO35_RS02695;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=CCO35_RS02695;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 509550 510668 . + . ID=gene-CCO35_RS02700;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=CCO35_RS02700;old_locus_tag=CCO35_02700 NZ_NPME01000001.1 Protein Homology CDS 509550 510668 . + 0 ID=cds-WP_000872764.1;Parent=gene-CCO35_RS02700;Dbxref=GenBank:WP_000872764.1;Name=WP_000872764.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=CCO35_RS02700;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872764.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 510709 510822 . + . ID=gene-CCO35_RS02705;Name=CCO35_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02705;old_locus_tag=CCO35_02705 NZ_NPME01000001.1 Protein Homology CDS 510709 510822 . + 0 ID=cds-WP_001253282.1;Parent=gene-CCO35_RS02705;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=CCO35_RS02705;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 511084 511656 . + . ID=gene-CCO35_RS02715;Name=CCO35_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02715;old_locus_tag=CCO35_02715 NZ_NPME01000001.1 Protein Homology CDS 511084 511656 . + 0 ID=cds-WP_001159782.1;Parent=gene-CCO35_RS02715;Dbxref=GenBank:WP_001159782.1;Name=WP_001159782.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=CCO35_RS02715;product=cytochrome b;protein_id=WP_001159782.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 511653 512228 . + . ID=gene-CCO35_RS02720;Name=CCO35_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02720;old_locus_tag=CCO35_02720 NZ_NPME01000001.1 Protein Homology CDS 511653 512228 . + 0 ID=cds-WP_000739886.1;Parent=gene-CCO35_RS02720;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=CCO35_RS02720;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 512280 513332 . - . ID=gene-CCO35_RS02725;Name=CCO35_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02725;old_locus_tag=CCO35_02725 NZ_NPME01000001.1 Protein Homology CDS 512280 513332 . - 0 ID=cds-WP_001144629.1;Parent=gene-CCO35_RS02725;Dbxref=GenBank:WP_001144629.1;Name=WP_001144629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=CCO35_RS02725;product=rhodanese-related sulfurtransferase;protein_id=WP_001144629.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 513552 514472 . + . ID=gene-CCO35_RS02730;Name=CCO35_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02730;old_locus_tag=CCO35_02730 NZ_NPME01000001.1 Protein Homology CDS 513552 514472 . + 0 ID=cds-WP_023213198.1;Parent=gene-CCO35_RS02730;Dbxref=GenBank:WP_023213198.1;Name=WP_023213198.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=CCO35_RS02730;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_023213198.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 514627 515841 . + . ID=gene-CCO35_RS02740;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=CCO35_RS02740;old_locus_tag=CCO35_02740 NZ_NPME01000001.1 Protein Homology CDS 514627 515841 . + 0 ID=cds-WP_094965306.1;Parent=gene-CCO35_RS02740;Dbxref=GenBank:WP_094965306.1;Name=WP_094965306.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=CCO35_RS02740;product=multidrug efflux MFS transporter MdtG;protein_id=WP_094965306.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 515923 516297 . + . ID=gene-CCO35_RS02745;Name=CCO35_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02745;old_locus_tag=CCO35_02745 NZ_NPME01000001.1 Protein Homology CDS 515923 516297 . + 0 ID=cds-WP_000180050.1;Parent=gene-CCO35_RS02745;Dbxref=GenBank:WP_000180050.1;Name=WP_000180050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=CCO35_RS02745;product=MysB family protein;protein_id=WP_000180050.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 516298 516525 . - . ID=gene-CCO35_RS02750;Name=CCO35_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02750;old_locus_tag=CCO35_02750 NZ_NPME01000001.1 Protein Homology CDS 516298 516525 . - 0 ID=cds-WP_001217832.1;Parent=gene-CCO35_RS02750;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=CCO35_RS02750;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 516599 519142 . - . ID=gene-CCO35_RS02755;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=CCO35_RS02755;old_locus_tag=CCO35_02755 NZ_NPME01000001.1 Protein Homology CDS 516599 519142 . - 0 ID=cds-WP_001044608.1;Parent=gene-CCO35_RS02755;Dbxref=GenBank:WP_001044608.1;Name=WP_001044608.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=CCO35_RS02755;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001044608.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 519135 520670 . - . ID=gene-CCO35_RS02760;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=CCO35_RS02760;old_locus_tag=CCO35_02760 NZ_NPME01000001.1 Protein Homology CDS 519135 520670 . - 0 ID=cds-WP_001562609.1;Parent=gene-CCO35_RS02760;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=CCO35_RS02760;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 520942 522096 . + . ID=gene-CCO35_RS02765;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=CCO35_RS02765;old_locus_tag=CCO35_02765 NZ_NPME01000001.1 Protein Homology CDS 520942 522096 . + 0 ID=cds-WP_000100058.1;Parent=gene-CCO35_RS02765;Dbxref=GenBank:WP_000100058.1;Name=WP_000100058.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=CCO35_RS02765;product=glucans biosynthesis protein MdoC;protein_id=WP_000100058.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 522113 523600 . - . ID=gene-CCO35_RS02770;Name=CCO35_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02770;old_locus_tag=CCO35_02770 NZ_NPME01000001.1 Protein Homology CDS 522113 523600 . - 0 ID=cds-WP_000976323.1;Parent=gene-CCO35_RS02770;Dbxref=GenBank:WP_000976323.1;Name=WP_000976323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=CCO35_RS02770;product=phospholipase D family protein;protein_id=WP_000976323.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 523536 524075 . - . ID=gene-CCO35_RS02775;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=CCO35_RS02775;old_locus_tag=CCO35_02775 NZ_NPME01000001.1 Protein Homology CDS 523536 524075 . - 0 ID=cds-WP_000203948.1;Parent=gene-CCO35_RS02775;Dbxref=GenBank:WP_000203948.1;Name=WP_000203948.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=CCO35_RS02775;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203948.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 524162 524482 . - . ID=gene-CCO35_RS02780;Name=CCO35_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02780;old_locus_tag=CCO35_02780 NZ_NPME01000001.1 Protein Homology CDS 524162 524482 . - 0 ID=cds-WP_000111254.1;Parent=gene-CCO35_RS02780;Dbxref=GenBank:WP_000111254.1;Name=WP_000111254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=CCO35_RS02780;product=type 1 fimbrial protein;protein_id=WP_000111254.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 524613 524939 . - . ID=gene-CCO35_RS02785;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=CCO35_RS02785;old_locus_tag=CCO35_02785 NZ_NPME01000001.1 Protein Homology CDS 524613 524939 . - 0 ID=cds-WP_000557256.1;Parent=gene-CCO35_RS02785;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=CCO35_RS02785;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 525001 525456 . - . ID=gene-CCO35_RS02790;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=CCO35_RS02790;old_locus_tag=CCO35_02790 NZ_NPME01000001.1 Protein Homology CDS 525001 525456 . - 0 ID=cds-WP_000771416.1;Parent=gene-CCO35_RS02790;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=CCO35_RS02790;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 525498 525953 . - . ID=gene-CCO35_RS02795;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=CCO35_RS02795;old_locus_tag=CCO35_02795 NZ_NPME01000001.1 Protein Homology CDS 525498 525953 . - 0 ID=cds-WP_000791656.1;Parent=gene-CCO35_RS02795;Dbxref=GenBank:WP_000791656.1;Name=WP_000791656.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=CCO35_RS02795;product=curli minor subunit CsgB;protein_id=WP_000791656.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 526708 527358 . + . ID=gene-CCO35_RS02800;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=CCO35_RS02800;old_locus_tag=CCO35_02800 NZ_NPME01000001.1 Protein Homology CDS 526708 527358 . + 0 ID=cds-WP_000481517.1;Parent=gene-CCO35_RS02800;Dbxref=GenBank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=CCO35_RS02800;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 527363 527758 . + . ID=gene-CCO35_RS02805;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=CCO35_RS02805;old_locus_tag=CCO35_02805 NZ_NPME01000001.1 Protein Homology CDS 527363 527758 . + 0 ID=cds-WP_000833305.1;Parent=gene-CCO35_RS02805;Dbxref=GenBank:WP_000833305.1;Name=WP_000833305.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=CCO35_RS02805;product=curli production assembly/transport protein CsgE;protein_id=WP_000833305.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 527785 528201 . + . ID=gene-CCO35_RS02810;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=CCO35_RS02810;old_locus_tag=CCO35_02810 NZ_NPME01000001.1 Protein Homology CDS 527785 528201 . + 0 ID=cds-WP_001264073.1;Parent=gene-CCO35_RS02810;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=CCO35_RS02810;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 528228 529061 . + . ID=gene-CCO35_RS02815;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=CCO35_RS02815;old_locus_tag=CCO35_02815 NZ_NPME01000001.1 Protein Homology CDS 528228 529061 . + 0 ID=cds-WP_001137620.1;Parent=gene-CCO35_RS02815;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=CCO35_RS02815;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 529100 529582 . - . ID=gene-CCO35_RS02820;Name=CCO35_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02820;old_locus_tag=CCO35_02820 NZ_NPME01000001.1 Protein Homology CDS 529100 529582 . - 0 ID=cds-WP_001546652.1;Parent=gene-CCO35_RS02820;Dbxref=GenBank:WP_001546652.1;Name=WP_001546652.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=CCO35_RS02820;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 529683 530237 . - . ID=gene-CCO35_RS02825;Name=CCO35_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02825;old_locus_tag=CCO35_02825 NZ_NPME01000001.1 Protein Homology CDS 529683 530237 . - 0 ID=cds-WP_001001890.1;Parent=gene-CCO35_RS02825;Dbxref=GenBank:WP_001001890.1;Name=WP_001001890.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=CCO35_RS02825;product=TorD/DmsD family molecular chaperone;protein_id=WP_001001890.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 530261 530998 . - . ID=gene-CCO35_RS02830;Name=CCO35_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02830;old_locus_tag=CCO35_02830 NZ_NPME01000001.1 Protein Homology CDS 530261 530998 . - 0 ID=cds-WP_000283646.1;Parent=gene-CCO35_RS02830;Dbxref=GenBank:WP_000283646.1;Name=WP_000283646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=CCO35_RS02830;product=phosphatase;protein_id=WP_000283646.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 531083 532021 . - . ID=gene-CCO35_RS02835;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=CCO35_RS02835;old_locus_tag=CCO35_02835 NZ_NPME01000001.1 Protein Homology CDS 531083 532021 . - 0 ID=cds-WP_000402552.1;Parent=gene-CCO35_RS02835;Dbxref=GenBank:WP_000402552.1;Name=WP_000402552.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=CCO35_RS02835;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402552.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 532257 532344 . + . ID=gene-CCO35_RS02845;Name=CCO35_RS02845;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS02845;old_locus_tag=CCO35_02845 NZ_NPME01000001.1 tRNAscan-SE tRNA 532257 532344 . + . ID=rna-CCO35_RS02845;Parent=gene-CCO35_RS02845;anticodon=(pos:532291..532293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS02845;product=tRNA-Ser NZ_NPME01000001.1 tRNAscan-SE exon 532257 532344 . + . ID=exon-CCO35_RS02845-1;Parent=rna-CCO35_RS02845;anticodon=(pos:532291..532293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS02845;product=tRNA-Ser NZ_NPME01000001.1 RefSeq gene 532752 533858 . - . ID=gene-CCO35_RS02855;Name=CCO35_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02855;old_locus_tag=CCO35_02855 NZ_NPME01000001.1 Protein Homology CDS 532752 533858 . - 0 ID=cds-WP_000988594.1;Parent=gene-CCO35_RS02855;Dbxref=GenBank:WP_000988594.1;Name=WP_000988594.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=CCO35_RS02855;product=Gfo/Idh/MocA family protein;protein_id=WP_000988594.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 533869 535149 . - . ID=gene-CCO35_RS02860;Name=CCO35_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02860;old_locus_tag=CCO35_02860 NZ_NPME01000001.1 Protein Homology CDS 533869 535149 . - 0 ID=cds-WP_000560755.1;Parent=gene-CCO35_RS02860;Dbxref=GenBank:WP_000560755.1;Name=WP_000560755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=CCO35_RS02860;product=MFS transporter;protein_id=WP_000560755.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 535432 536124 . - . ID=gene-CCO35_RS02865;Name=CCO35_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02865;old_locus_tag=CCO35_02865 NZ_NPME01000001.1 Protein Homology CDS 535432 536124 . - 0 ID=cds-WP_000700859.1;Parent=gene-CCO35_RS02865;Dbxref=GenBank:WP_000700859.1;Name=WP_000700859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=CCO35_RS02865;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000700859.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 536169 537323 . - . ID=gene-CCO35_RS02870;Name=CCO35_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02870;old_locus_tag=CCO35_02870 NZ_NPME01000001.1 Protein Homology CDS 536169 537323 . - 0 ID=cds-WP_001643958.1;Parent=gene-CCO35_RS02870;Dbxref=GenBank:WP_001643958.1;Name=WP_001643958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=CCO35_RS02870;product=N-acetylneuraminate epimerase;protein_id=WP_001643958.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 537829 538509 . + . ID=gene-CCO35_RS02875;Name=CCO35_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02875;old_locus_tag=CCO35_02875 NZ_NPME01000001.1 Protein Homology CDS 537829 538509 . + 0 ID=cds-WP_000054242.1;Parent=gene-CCO35_RS02875;Dbxref=GenBank:WP_000054242.1;Name=WP_000054242.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=CCO35_RS02875;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054242.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 538846 540342 . + . ID=gene-CCO35_RS02885;Name=CCO35_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02885;old_locus_tag=CCO35_02885 NZ_NPME01000001.1 Protein Homology CDS 538846 540342 . + 0 ID=cds-WP_094965307.1;Parent=gene-CCO35_RS02885;Dbxref=GenBank:WP_094965307.1;Name=WP_094965307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=CCO35_RS02885;product=sodium:solute symporter;protein_id=WP_094965307.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 540628 541509 . + . ID=gene-CCO35_RS02890;Name=CCO35_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02890;old_locus_tag=CCO35_02890 NZ_NPME01000001.1 Protein Homology CDS 540628 541509 . + 0 ID=cds-WP_000433674.1;Parent=gene-CCO35_RS02890;Dbxref=GenBank:WP_000433674.1;Name=WP_000433674.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=CCO35_RS02890;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000433674.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 541615 542403 . - . ID=gene-CCO35_RS02895;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=CCO35_RS02895;old_locus_tag=CCO35_02895 NZ_NPME01000001.1 Protein Homology CDS 541615 542403 . - 0 ID=cds-WP_000533527.1;Parent=gene-CCO35_RS02895;Dbxref=GenBank:WP_000533527.1;Name=WP_000533527.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=CCO35_RS02895;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533527.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 543296 544804 . - . ID=gene-CCO35_RS02900;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CCO35_RS02900;old_locus_tag=CCO35_02900 NZ_NPME01000001.1 Protein Homology CDS 543296 544804 . - 0 ID=cds-WP_001018463.1;Parent=gene-CCO35_RS02900;Dbxref=GenBank:WP_001018463.1;Name=WP_001018463.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=CCO35_RS02900;product=sodium/proline symporter PutP;protein_id=WP_001018463.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 545226 549188 . + . ID=gene-CCO35_RS02910;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=CCO35_RS02910;old_locus_tag=CCO35_02910 NZ_NPME01000001.1 Protein Homology CDS 545226 549188 . + 0 ID=cds-WP_031565223.1;Parent=gene-CCO35_RS02910;Dbxref=GenBank:WP_031565223.1;Name=WP_031565223.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=CCO35_RS02910;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_031565223.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 549247 549642 . + . ID=gene-CCO35_RS02915;Name=CCO35_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02915;old_locus_tag=CCO35_02915 NZ_NPME01000001.1 Protein Homology CDS 549247 549642 . + 0 ID=cds-WP_000821064.1;Parent=gene-CCO35_RS02915;Dbxref=GenBank:WP_000821064.1;Name=WP_000821064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=CCO35_RS02915;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821064.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 549639 550277 . - . ID=gene-CCO35_RS02920;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=CCO35_RS02920;old_locus_tag=CCO35_02920 NZ_NPME01000001.1 Protein Homology CDS 549639 550277 . - 0 ID=cds-WP_000083128.1;Parent=gene-CCO35_RS02920;Dbxref=GenBank:WP_000083128.1;Name=WP_000083128.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=CCO35_RS02920;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083128.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 550414 550581 . - . ID=gene-CCO35_RS02925;Name=CCO35_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02925;old_locus_tag=CCO35_02925 NZ_NPME01000001.1 Protein Homology CDS 550414 550581 . - 0 ID=cds-WP_001273663.1;Parent=gene-CCO35_RS02925;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=CCO35_RS02925;product=general stress protein;protein_id=WP_001273663.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 550966 551562 . + . ID=gene-CCO35_RS02935;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=CCO35_RS02935;old_locus_tag=CCO35_02935 NZ_NPME01000001.1 Protein Homology CDS 550966 551562 . + 0 ID=cds-WP_001062898.1;Parent=gene-CCO35_RS02935;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=CCO35_RS02935;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 551583 551810 . + . ID=gene-CCO35_RS02940;Name=CCO35_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02940;old_locus_tag=CCO35_02940 NZ_NPME01000001.1 Protein Homology CDS 551583 551810 . + 0 ID=cds-WP_001143125.1;Parent=gene-CCO35_RS02940;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=CCO35_RS02940;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 551844 553085 . - . ID=gene-CCO35_RS02945;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=CCO35_RS02945;old_locus_tag=CCO35_02945 NZ_NPME01000001.1 Protein Homology CDS 551844 553085 . - 0 ID=cds-WP_000749199.1;Parent=gene-CCO35_RS02945;Dbxref=GenBank:WP_000749199.1;Name=WP_000749199.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=CCO35_RS02945;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_000749199.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 553218 553724 . - . ID=gene-CCO35_RS02950;Name=CCO35_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02950;old_locus_tag=CCO35_02950 NZ_NPME01000001.1 Protein Homology CDS 553218 553724 . - 0 ID=cds-WP_024797598.1;Parent=gene-CCO35_RS02950;Dbxref=GenBank:WP_024797598.1;Name=WP_024797598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=CCO35_RS02950;product=protein disulfide oxidoreductase;protein_id=WP_024797598.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 553714 554337 . - . ID=gene-CCO35_RS02955;Name=CCO35_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02955;old_locus_tag=CCO35_02955 NZ_NPME01000001.1 Protein Homology CDS 553714 554337 . - 0 ID=cds-WP_000876686.1;Parent=gene-CCO35_RS02955;Dbxref=GenBank:WP_000876686.1;Name=WP_000876686.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=CCO35_RS02955;product=DsbA family protein;protein_id=WP_000876686.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 554334 556220 . - . ID=gene-CCO35_RS02960;Name=CCO35_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02960;old_locus_tag=CCO35_02960 NZ_NPME01000001.1 Protein Homology CDS 554334 556220 . - 0 ID=cds-WP_023213186.1;Parent=gene-CCO35_RS02960;Dbxref=GenBank:WP_023213186.1;Name=WP_023213186.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=CCO35_RS02960;product=protein-disulfide reductase DsbD family protein;protein_id=WP_023213186.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 556269 556631 . - . ID=gene-CCO35_RS02965;Name=CCO35_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02965;old_locus_tag=CCO35_02965 NZ_NPME01000001.1 Protein Homology CDS 556269 556631 . - 0 ID=cds-WP_001118902.1;Parent=gene-CCO35_RS02965;Dbxref=GenBank:WP_001118902.1;Name=WP_001118902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=CCO35_RS02965;product=copper resistance protein;protein_id=WP_001118902.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 556867 557787 . + . ID=gene-CCO35_RS02975;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=CCO35_RS02975;old_locus_tag=CCO35_02975 NZ_NPME01000001.1 Protein Homology CDS 556867 557787 . + 0 ID=cds-WP_000420603.1;Parent=gene-CCO35_RS02975;Dbxref=GenBank:WP_000420603.1;Name=WP_000420603.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=CCO35_RS02975;product=curved DNA-binding protein;protein_id=WP_000420603.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 557787 558092 . + . ID=gene-CCO35_RS02980;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=CCO35_RS02980;old_locus_tag=CCO35_02980 NZ_NPME01000001.1 Protein Homology CDS 557787 558092 . + 0 ID=cds-WP_001284251.1;Parent=gene-CCO35_RS02980;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=CCO35_RS02980;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 558746 559108 . + . ID=gene-CCO35_RS02990;Name=CCO35_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02990;old_locus_tag=CCO35_02990 NZ_NPME01000001.1 Protein Homology CDS 558746 559108 . + 0 ID=cds-WP_001537781.1;Parent=gene-CCO35_RS02990;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=CCO35_RS02990;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 559516 560454 . - . ID=gene-CCO35_RS02995;Name=CCO35_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS02995;old_locus_tag=CCO35_02995 NZ_NPME01000001.1 Protein Homology CDS 559516 560454 . - 0 ID=cds-WP_000976564.1;Parent=gene-CCO35_RS02995;Dbxref=GenBank:WP_000976564.1;Name=WP_000976564.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=CCO35_RS02995;product=MBL fold metallo-hydrolase;protein_id=WP_000976564.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 560468 561364 . - . ID=gene-CCO35_RS03000;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=CCO35_RS03000;old_locus_tag=CCO35_03000 NZ_NPME01000001.1 Protein Homology CDS 560468 561364 . - 0 ID=cds-WP_000336602.1;Parent=gene-CCO35_RS03000;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=CCO35_RS03000;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 561374 562750 . - . ID=gene-CCO35_RS03005;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=CCO35_RS03005;old_locus_tag=CCO35_03005 NZ_NPME01000001.1 Protein Homology CDS 561374 562750 . - 0 ID=cds-WP_001285795.1;Parent=gene-CCO35_RS03005;Dbxref=GenBank:WP_001285795.1;Name=WP_001285795.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=CCO35_RS03005;product=4-hydroxyphenylacetate permease;protein_id=WP_001285795.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 562823 563614 . - . ID=gene-CCO35_RS03010;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=CCO35_RS03010;old_locus_tag=CCO35_03010 NZ_NPME01000001.1 Protein Homology CDS 562823 563614 . - 0 ID=cds-WP_000785062.1;Parent=gene-CCO35_RS03010;Dbxref=GenBank:WP_000785062.1;Name=WP_000785062.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=CCO35_RS03010;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000785062.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 563625 564428 . - . ID=gene-CCO35_RS03015;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=CCO35_RS03015;old_locus_tag=CCO35_03015 NZ_NPME01000001.1 Protein Homology CDS 563625 564428 . - 0 ID=cds-WP_000884795.1;Parent=gene-CCO35_RS03015;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=CCO35_RS03015;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 564572 564952 . - . ID=gene-CCO35_RS03025;Name=CCO35_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03025;old_locus_tag=CCO35_03025 NZ_NPME01000001.1 Protein Homology CDS 564572 564952 . - 0 ID=cds-WP_001119849.1;Parent=gene-CCO35_RS03025;Dbxref=GenBank:WP_001119849.1;Name=WP_001119849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=CCO35_RS03025;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119849.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 564962 565813 . - . ID=gene-CCO35_RS03030;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=CCO35_RS03030;old_locus_tag=CCO35_03030 NZ_NPME01000001.1 Protein Homology CDS 564962 565813 . - 0 ID=cds-WP_000516978.1;Parent=gene-CCO35_RS03030;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=CCO35_RS03030;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 565815 567281 . - . ID=gene-CCO35_RS03035;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=CCO35_RS03035;old_locus_tag=CCO35_03035 NZ_NPME01000001.1 Protein Homology CDS 565815 567281 . - 0 ID=cds-WP_000723524.1;Parent=gene-CCO35_RS03035;Dbxref=GenBank:WP_000723524.1;Name=WP_000723524.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=CCO35_RS03035;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723524.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 567278 568567 . - . ID=gene-CCO35_RS03040;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=CCO35_RS03040;old_locus_tag=CCO35_03040 NZ_NPME01000001.1 Protein Homology CDS 567278 568567 . - 0 ID=cds-WP_000679210.1;Parent=gene-CCO35_RS03040;Dbxref=GenBank:WP_000679210.1;Name=WP_000679210.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=CCO35_RS03040;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679210.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 568842 569282 . + . ID=gene-CCO35_RS03045;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=CCO35_RS03045;old_locus_tag=CCO35_03045 NZ_NPME01000001.1 Protein Homology CDS 568842 569282 . + 0 ID=cds-WP_000543922.1;Parent=gene-CCO35_RS03045;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=CCO35_RS03045;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 569500 571062 . + . ID=gene-CCO35_RS03050;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=CCO35_RS03050;old_locus_tag=CCO35_03050 NZ_NPME01000001.1 Protein Homology CDS 569500 571062 . + 0 ID=cds-WP_000801496.1;Parent=gene-CCO35_RS03050;Dbxref=GenBank:WP_000801496.1;Name=WP_000801496.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=CCO35_RS03050;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 571080 571592 . + . ID=gene-CCO35_RS03055;Name=CCO35_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03055;old_locus_tag=CCO35_03055 NZ_NPME01000001.1 Protein Homology CDS 571080 571592 . + 0 ID=cds-WP_001195556.1;Parent=gene-CCO35_RS03055;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=CCO35_RS03055;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 571925 572335 . - . ID=gene-CCO35_RS03065;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=CCO35_RS03065;old_locus_tag=CCO35_03065 NZ_NPME01000001.1 Protein Homology CDS 571925 572335 . - 0 ID=cds-WP_000833182.1;Parent=gene-CCO35_RS03065;Dbxref=GenBank:WP_000833182.1;Name=WP_000833182.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=CCO35_RS03065;product=hydroxyisourate hydrolase;protein_id=WP_000833182.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 572471 573151 . + . ID=gene-CCO35_RS03070;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=CCO35_RS03070;old_locus_tag=CCO35_03070 NZ_NPME01000001.1 Protein Homology CDS 572471 573151 . + 0 ID=cds-WP_000698217.1;Parent=gene-CCO35_RS03070;Dbxref=GenBank:WP_000698217.1;Name=WP_000698217.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=CCO35_RS03070;product=response regulator transcription factor HprR;protein_id=WP_000698217.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 573144 574508 . + . ID=gene-CCO35_RS03075;Name=CCO35_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03075;old_locus_tag=CCO35_03075 NZ_NPME01000001.1 Protein Homology CDS 573144 574508 . + 0 ID=cds-WP_001529185.1;Parent=gene-CCO35_RS03075;Dbxref=GenBank:WP_001529185.1;Name=WP_001529185.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=CCO35_RS03075;product=heavy metal sensor histidine kinase;protein_id=WP_001529185.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 574681 576150 . + . ID=gene-CCO35_RS03080;Name=CCO35_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03080;old_locus_tag=CCO35_03080 NZ_NPME01000001.1 Protein Homology CDS 574681 576150 . + 0 ID=cds-WP_000760232.1;Parent=gene-CCO35_RS03080;Dbxref=GenBank:WP_000760232.1;Name=WP_000760232.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=CCO35_RS03080;product=C69 family dipeptidase;protein_id=WP_000760232.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 576259 576369 . + . ID=gene-CCO35_RS03085;Name=CCO35_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03085;old_locus_tag=CCO35_03085 NZ_NPME01000001.1 Protein Homology CDS 576259 576369 . + 0 ID=cds-WP_000174815.1;Parent=gene-CCO35_RS03085;Dbxref=GenBank:WP_000174815.1;Name=WP_000174815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=CCO35_RS03085;product=hypothetical protein;protein_id=WP_000174815.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 576370 576540 . - . ID=gene-CCO35_RS03090;Name=CCO35_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03090;old_locus_tag=CCO35_03090 NZ_NPME01000001.1 Protein Homology CDS 576370 576540 . - 0 ID=cds-WP_001111006.1;Parent=gene-CCO35_RS03090;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=CCO35_RS03090;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 576875 578560 . + . ID=gene-CCO35_RS03095;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=CCO35_RS03095;old_locus_tag=CCO35_03095 NZ_NPME01000001.1 Protein Homology CDS 576875 578560 . + 0 ID=cds-WP_001166958.1;Parent=gene-CCO35_RS03095;Dbxref=GenBank:WP_001166958.1;Name=WP_001166958.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=CCO35_RS03095;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_001166958.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 578577 578918 . + . ID=gene-CCO35_RS03100;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=CCO35_RS03100;old_locus_tag=CCO35_03100 NZ_NPME01000001.1 Protein Homology CDS 578577 578918 . + 0 ID=cds-WP_000444724.1;Parent=gene-CCO35_RS03100;Dbxref=GenBank:WP_000444724.1;Name=WP_000444724.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=CCO35_RS03100;product=type III secretion system chaperone SigE;protein_id=WP_000444724.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 578928 579250 . - . ID=gene-CCO35_RS23915;Name=CCO35_RS23915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23915;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 578928 579250 . - 0 ID=cds-CCO35_RS23915;Parent=gene-CCO35_RS23915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=CCO35_RS23915;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 579468 580343 . + . ID=gene-CCO35_RS03110;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=CCO35_RS03110;old_locus_tag=CCO35_03110 NZ_NPME01000001.1 Protein Homology CDS 579468 580343 . + 0 ID=cds-WP_001123030.1;Parent=gene-CCO35_RS03110;Dbxref=GenBank:WP_001123030.1;Name=WP_001123030.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=CCO35_RS03110;product=SPI-2 type III secretion system effector PipB;protein_id=WP_001123030.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 580514 581014 . + . ID=gene-CCO35_RS03115;Name=CCO35_RS03115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS03115;old_locus_tag=CCO35_03115;partial=true;pseudo=true;start_range=.,580514 NZ_NPME01000001.1 Protein Homology CDS 580514 581014 . + 0 ID=cds-CCO35_RS03115;Parent=gene-CCO35_RS03115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=CCO35_RS03115;partial=true;product=PipA/GogA/GtgA family type III secretion system effector;pseudo=true;start_range=.,580514;transl_table=11 NZ_NPME01000001.1 RefSeq gene 581400 581666 . + . ID=gene-CCO35_RS23920;Name=CCO35_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23920;old_locus_tag=CCO35_03120 NZ_NPME01000001.1 Protein Homology CDS 581400 581666 . + 0 ID=cds-WP_079965604.1;Parent=gene-CCO35_RS23920;Dbxref=GenBank:WP_079965604.1;Name=WP_079965604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001709116.1;locus_tag=CCO35_RS23920;product=hypothetical protein;protein_id=WP_079965604.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 581682 581873 . - . ID=gene-CCO35_RS03125;Name=CCO35_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03125;old_locus_tag=CCO35_03125 NZ_NPME01000001.1 Protein Homology CDS 581682 581873 . - 0 ID=cds-WP_024138909.1;Parent=gene-CCO35_RS03125;Dbxref=GenBank:WP_024138909.1;Name=WP_024138909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343069.1;locus_tag=CCO35_RS03125;product=DUF2767 family protein;protein_id=WP_024138909.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 581982 582704 . - . ID=gene-CCO35_RS23925;Name=CCO35_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23925 NZ_NPME01000001.1 GeneMarkS-2+ CDS 581982 582704 . - 0 ID=cds-WP_001033375.1;Parent=gene-CCO35_RS23925;Dbxref=GenBank:WP_001033375.1;Name=WP_001033375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS23925;product=hypothetical protein;protein_id=WP_001033375.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 582772 583365 . - . ID=gene-CCO35_RS03135;Name=CCO35_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03135;old_locus_tag=CCO35_03135 NZ_NPME01000001.1 Protein Homology CDS 582772 583365 . - 0 ID=cds-WP_079965605.1;Parent=gene-CCO35_RS03135;Dbxref=GenBank:WP_079965605.1;Name=WP_079965605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405997.1;locus_tag=CCO35_RS03135;product=tail fiber assembly protein;protein_id=WP_079965605.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 583355 584179 . - . ID=gene-CCO35_RS03140;Name=CCO35_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03140;old_locus_tag=CCO35_03140 NZ_NPME01000001.1 Protein Homology CDS 583355 584179 . - 0 ID=cds-WP_079965606.1;Parent=gene-CCO35_RS03140;Dbxref=GenBank:WP_079965606.1;Name=WP_079965606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461523.1;locus_tag=CCO35_RS03140;product=macro domain-containing protein;protein_id=WP_079965606.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 584176 585048 . - . ID=gene-CCO35_RS23930;Name=CCO35_RS23930;end_range=585048,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23930;partial=true;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 584176 585048 . - 0 ID=cds-CCO35_RS23930;Parent=gene-CCO35_RS23930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=585048,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=CCO35_RS23930;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 585882 586508 . - . ID=gene-CCO35_RS03150;Name=CCO35_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03150;old_locus_tag=CCO35_03150 NZ_NPME01000001.1 Protein Homology CDS 585882 586508 . - 0 ID=cds-WP_079965608.1;Parent=gene-CCO35_RS03150;Dbxref=GenBank:WP_079965608.1;Name=WP_079965608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729407.1;locus_tag=CCO35_RS03150;product=hypothetical protein;protein_id=WP_079965608.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 586492 587718 . - . ID=gene-CCO35_RS03155;Name=CCO35_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03155;old_locus_tag=CCO35_03155 NZ_NPME01000001.1 Protein Homology CDS 586492 587718 . - 0 ID=cds-WP_001643834.1;Parent=gene-CCO35_RS03155;Dbxref=GenBank:WP_001643834.1;Name=WP_001643834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281708.1;locus_tag=CCO35_RS03155;product=baseplate J/gp47 family protein;protein_id=WP_001643834.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 587715 588047 . - . ID=gene-CCO35_RS03160;Name=CCO35_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03160;old_locus_tag=CCO35_03160 NZ_NPME01000001.1 Protein Homology CDS 587715 588047 . - 0 ID=cds-WP_001261467.1;Parent=gene-CCO35_RS03160;Dbxref=GenBank:WP_001261467.1;Name=WP_001261467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001261465.1;locus_tag=CCO35_RS03160;product=hypothetical protein;protein_id=WP_001261467.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 588044 588760 . - . ID=gene-CCO35_RS03165;Name=CCO35_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03165;old_locus_tag=CCO35_03165 NZ_NPME01000001.1 Protein Homology CDS 588044 588760 . - 0 ID=cds-WP_000026342.1;Parent=gene-CCO35_RS03165;Dbxref=GenBank:WP_000026342.1;Name=WP_000026342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000026344.1;locus_tag=CCO35_RS03165;product=hypothetical protein;protein_id=WP_000026342.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 588757 589800 . - . ID=gene-CCO35_RS03170;Name=CCO35_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03170;old_locus_tag=CCO35_03170 NZ_NPME01000001.1 Protein Homology CDS 588757 589800 . - 0 ID=cds-WP_023181121.1;Parent=gene-CCO35_RS03170;Dbxref=GenBank:WP_023181121.1;Name=WP_023181121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835743.1;locus_tag=CCO35_RS03170;product=hypothetical protein;protein_id=WP_023181121.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 589800 590075 . - . ID=gene-CCO35_RS03175;Name=CCO35_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03175;old_locus_tag=CCO35_03175 NZ_NPME01000001.1 Protein Homology CDS 589800 590075 . - 0 ID=cds-WP_000061271.1;Parent=gene-CCO35_RS03175;Dbxref=GenBank:WP_000061271.1;Name=WP_000061271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061271.1;locus_tag=CCO35_RS03175;product=hypothetical protein;protein_id=WP_000061271.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 590072 590788 . - . ID=gene-CCO35_RS03180;Name=CCO35_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03180;old_locus_tag=CCO35_03180 NZ_NPME01000001.1 Protein Homology CDS 590072 590788 . - 0 ID=cds-WP_000011138.1;Parent=gene-CCO35_RS03180;Dbxref=GenBank:WP_000011138.1;Name=WP_000011138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000011137.1;locus_tag=CCO35_RS03180;product=hypothetical protein;protein_id=WP_000011138.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 590788 592842 . - . ID=gene-CCO35_RS03185;Name=CCO35_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03185;old_locus_tag=CCO35_03185 NZ_NPME01000001.1 Protein Homology CDS 590788 592842 . - 0 ID=cds-WP_079965609.1;Parent=gene-CCO35_RS03185;Dbxref=GenBank:WP_079965609.1;Name=WP_079965609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729222.1;locus_tag=CCO35_RS03185;product=hypothetical protein;protein_id=WP_079965609.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 592966 593553 . - . ID=gene-CCO35_RS03190;Name=CCO35_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03190;old_locus_tag=CCO35_03190 NZ_NPME01000001.1 Protein Homology CDS 592966 593553 . - 0 ID=cds-WP_000268743.1;Parent=gene-CCO35_RS03190;Dbxref=GenBank:WP_000268743.1;Name=WP_000268743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268742.1;locus_tag=CCO35_RS03190;product=hypothetical protein;protein_id=WP_000268743.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 593553 593990 . - . ID=gene-CCO35_RS03195;Name=CCO35_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03195;old_locus_tag=CCO35_03195 NZ_NPME01000001.1 Protein Homology CDS 593553 593990 . - 0 ID=cds-WP_001133547.1;Parent=gene-CCO35_RS03195;Dbxref=GenBank:WP_001133547.1;Name=WP_001133547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001133547.1;locus_tag=CCO35_RS03195;product=hypothetical protein;protein_id=WP_001133547.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 593994 595388 . - . ID=gene-CCO35_RS03200;Name=CCO35_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03200;old_locus_tag=CCO35_03200 NZ_NPME01000001.1 Protein Homology CDS 593994 595388 . - 0 ID=cds-WP_079819482.1;Parent=gene-CCO35_RS03200;Dbxref=GenBank:WP_079819482.1;Name=WP_079819482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835740.1;locus_tag=CCO35_RS03200;product=hypothetical protein;protein_id=WP_079819482.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 595393 596331 . - . ID=gene-CCO35_RS03205;Name=CCO35_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03205;old_locus_tag=CCO35_03205 NZ_NPME01000001.1 Protein Homology CDS 595393 596331 . - 0 ID=cds-WP_079819483.1;Parent=gene-CCO35_RS03205;Dbxref=GenBank:WP_079819483.1;Name=WP_079819483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001139605.1;locus_tag=CCO35_RS03205;product=hypothetical protein;protein_id=WP_079819483.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 596315 596746 . - . ID=gene-CCO35_RS03210;Name=CCO35_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03210;old_locus_tag=CCO35_03210 NZ_NPME01000001.1 Protein Homology CDS 596315 596746 . - 0 ID=cds-WP_000766224.1;Parent=gene-CCO35_RS03210;Dbxref=GenBank:WP_000766224.1;Name=WP_000766224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000766224.1;locus_tag=CCO35_RS03210;product=hypothetical protein;protein_id=WP_000766224.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 596743 597168 . - . ID=gene-CCO35_RS03215;Name=CCO35_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03215;old_locus_tag=CCO35_03215 NZ_NPME01000001.1 Protein Homology CDS 596743 597168 . - 0 ID=cds-WP_001114360.1;Parent=gene-CCO35_RS03215;Dbxref=GenBank:WP_001114360.1;Name=WP_001114360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001114359.1;locus_tag=CCO35_RS03215;product=hypothetical protein;protein_id=WP_001114360.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 597181 597666 . - . ID=gene-CCO35_RS03220;Name=CCO35_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03220;old_locus_tag=CCO35_03220 NZ_NPME01000001.1 Protein Homology CDS 597181 597666 . - 0 ID=cds-WP_079965610.1;Parent=gene-CCO35_RS03220;Dbxref=GenBank:WP_079965610.1;Name=WP_079965610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000780865.1;locus_tag=CCO35_RS03220;product=hypothetical protein;protein_id=WP_079965610.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 597731 598762 . - . ID=gene-CCO35_RS03225;Name=CCO35_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03225;old_locus_tag=CCO35_03225 NZ_NPME01000001.1 Protein Homology CDS 597731 598762 . - 0 ID=cds-WP_001110972.1;Parent=gene-CCO35_RS03225;Dbxref=GenBank:WP_001110972.1;Name=WP_001110972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406010.1;locus_tag=CCO35_RS03225;product=major capsid family protein;protein_id=WP_001110972.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 598780 599652 . - . ID=gene-CCO35_RS03230;Name=CCO35_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03230;old_locus_tag=CCO35_03230 NZ_NPME01000001.1 Protein Homology CDS 598780 599652 . - 0 ID=cds-WP_023181116.1;Parent=gene-CCO35_RS03230;Dbxref=GenBank:WP_023181116.1;Name=WP_023181116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574105.1;locus_tag=CCO35_RS03230;product=hypothetical protein;protein_id=WP_023181116.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 599673 601247 . - . ID=gene-CCO35_RS03235;Name=CCO35_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03235;old_locus_tag=CCO35_03235 NZ_NPME01000001.1 Protein Homology CDS 599673 601247 . - 0 ID=cds-WP_079965611.1;Parent=gene-CCO35_RS03235;Dbxref=GenBank:WP_079965611.1;Name=WP_079965611.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406012.1;locus_tag=CCO35_RS03235;product=NUDIX hydrolase;protein_id=WP_079965611.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 601248 602123 . - . ID=gene-CCO35_RS03240;Name=CCO35_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03240;old_locus_tag=CCO35_03240 NZ_NPME01000001.1 Protein Homology CDS 601248 602123 . - 0 ID=cds-WP_058222835.1;Parent=gene-CCO35_RS03240;Dbxref=GenBank:WP_058222835.1;Name=WP_058222835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835735.1;locus_tag=CCO35_RS03240;product=hypothetical protein;protein_id=WP_058222835.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 602095 603525 . - . ID=gene-CCO35_RS03245;Name=CCO35_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03245;old_locus_tag=CCO35_03245 NZ_NPME01000001.1 Protein Homology CDS 602095 603525 . - 0 ID=cds-WP_079965612.1;Parent=gene-CCO35_RS03245;Dbxref=GenBank:WP_079965612.1;Name=WP_079965612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001150139.1;locus_tag=CCO35_RS03245;product=anti-CBASS protein Acb1 family protein;protein_id=WP_079965612.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 603525 604796 . - . ID=gene-CCO35_RS03250;Name=CCO35_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03250;old_locus_tag=CCO35_03250 NZ_NPME01000001.1 Protein Homology CDS 603525 604796 . - 0 ID=cds-WP_010835733.1;Parent=gene-CCO35_RS03250;Dbxref=GenBank:WP_010835733.1;Name=WP_010835733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016152532.1;locus_tag=CCO35_RS03250;product=hypothetical protein;protein_id=WP_010835733.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 604786 605760 . - . ID=gene-CCO35_RS03255;Name=CCO35_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03255;old_locus_tag=CCO35_03255 NZ_NPME01000001.1 Protein Homology CDS 604786 605760 . - 0 ID=cds-WP_079965613.1;Parent=gene-CCO35_RS03255;Dbxref=GenBank:WP_079965613.1;Name=WP_079965613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118139.1;locus_tag=CCO35_RS03255;product=terminase small subunit;protein_id=WP_079965613.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 605858 606178 . - . ID=gene-CCO35_RS03260;Name=CCO35_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03260;old_locus_tag=CCO35_03260 NZ_NPME01000001.1 Protein Homology CDS 605858 606178 . - 0 ID=cds-WP_079965614.1;Parent=gene-CCO35_RS03260;Dbxref=GenBank:WP_079965614.1;Name=WP_079965614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651450.1;locus_tag=CCO35_RS03260;product=GrlR family regulatory protein;protein_id=WP_079965614.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 606319 606855 . - . ID=gene-CCO35_RS03265;Name=CCO35_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03265;old_locus_tag=CCO35_03265 NZ_NPME01000001.1 Protein Homology CDS 606319 606855 . - 0 ID=cds-WP_079965615.1;Parent=gene-CCO35_RS03265;Dbxref=GenBank:WP_079965615.1;Name=WP_079965615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050817.1;locus_tag=CCO35_RS03265;product=DUF2514 family protein;protein_id=WP_079965615.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 606852 607466 . - . ID=gene-CCO35_RS03270;Name=CCO35_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03270;old_locus_tag=CCO35_03270 NZ_NPME01000001.1 Protein Homology CDS 606852 607466 . - 0 ID=cds-WP_079965616.1;Parent=gene-CCO35_RS03270;Dbxref=GenBank:WP_079965616.1;Name=WP_079965616.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=CCO35_RS03270;product=glycoside hydrolase family 19 protein;protein_id=WP_079965616.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 607469 607810 . - . ID=gene-CCO35_RS03275;Name=CCO35_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03275;old_locus_tag=CCO35_03275 NZ_NPME01000001.1 Protein Homology CDS 607469 607810 . - 0 ID=cds-WP_079965635.1;Parent=gene-CCO35_RS03275;Dbxref=GenBank:WP_079965635.1;Name=WP_079965635.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000781781.1;locus_tag=CCO35_RS03275;product=phage holin%2C lambda family;protein_id=WP_079965635.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 608304 608882 . - . ID=gene-CCO35_RS03280;Name=CCO35_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03280;old_locus_tag=CCO35_03280 NZ_NPME01000001.1 Protein Homology CDS 608304 608882 . - 0 ID=cds-WP_079965617.1;Parent=gene-CCO35_RS03280;Dbxref=GenBank:WP_079965617.1;Name=WP_079965617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000640103.1;locus_tag=CCO35_RS03280;product=DUF1133 family protein;protein_id=WP_079965617.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 608879 609172 . - . ID=gene-CCO35_RS03285;Name=CCO35_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03285;old_locus_tag=CCO35_03285 NZ_NPME01000001.1 Protein Homology CDS 608879 609172 . - 0 ID=cds-WP_057064592.1;Parent=gene-CCO35_RS03285;Dbxref=GenBank:WP_057064592.1;Name=WP_057064592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717784.1;locus_tag=CCO35_RS03285;product=DUF1364 domain-containing protein;protein_id=WP_057064592.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 609169 609765 . - . ID=gene-CCO35_RS03290;Name=CCO35_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03290;old_locus_tag=CCO35_03290 NZ_NPME01000001.1 Protein Homology CDS 609169 609765 . - 0 ID=cds-WP_079965618.1;Parent=gene-CCO35_RS03290;Dbxref=GenBank:WP_079965618.1;Name=WP_079965618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000090038.1;locus_tag=CCO35_RS03290;product=DUF1367 family protein;protein_id=WP_079965618.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 610296 610931 . - . ID=gene-CCO35_RS03300;Name=CCO35_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03300;old_locus_tag=CCO35_03300 NZ_NPME01000001.1 Protein Homology CDS 610296 610931 . - 0 ID=cds-WP_094965308.1;Parent=gene-CCO35_RS03300;Dbxref=GenBank:WP_094965308.1;Name=WP_094965308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039733.5;locus_tag=CCO35_RS03300;product=DUF6338 family protein;protein_id=WP_094965308.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 611213 611821 . - . ID=gene-CCO35_RS03305;Name=CCO35_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03305;old_locus_tag=CCO35_03305 NZ_NPME01000001.1 Protein Homology CDS 611213 611821 . - 0 ID=cds-WP_079965620.1;Parent=gene-CCO35_RS03305;Dbxref=GenBank:WP_079965620.1;Name=WP_079965620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835728.1;locus_tag=CCO35_RS03305;product=MT-A70 family methyltransferase;protein_id=WP_079965620.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 611814 612062 . - . ID=gene-CCO35_RS03310;Name=CCO35_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03310;old_locus_tag=CCO35_03310 NZ_NPME01000001.1 Protein Homology CDS 611814 612062 . - 0 ID=cds-WP_079965621.1;Parent=gene-CCO35_RS03310;Dbxref=GenBank:WP_079965621.1;Name=WP_079965621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918618.1;locus_tag=CCO35_RS03310;product=hypothetical protein;protein_id=WP_079965621.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 612066 612746 . - . ID=gene-CCO35_RS03315;Name=CCO35_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03315;old_locus_tag=CCO35_03315 NZ_NPME01000001.1 Protein Homology CDS 612066 612746 . - 0 ID=cds-WP_079965622.1;Parent=gene-CCO35_RS03315;Dbxref=GenBank:WP_079965622.1;Name=WP_079965622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406023.1;locus_tag=CCO35_RS03315;product=hypothetical protein;protein_id=WP_079965622.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 612784 614172 . - . ID=gene-CCO35_RS03320;Name=CCO35_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03320;old_locus_tag=CCO35_03320 NZ_NPME01000001.1 Protein Homology CDS 612784 614172 . - 0 ID=cds-WP_079965623.1;Parent=gene-CCO35_RS03320;Dbxref=GenBank:WP_079965623.1;Name=WP_079965623.1;Ontology_term=GO:0006269,GO:0003677,GO:0003678,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365923.1;locus_tag=CCO35_RS03320;product=replicative DNA helicase;protein_id=WP_079965623.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 614169 615149 . - . ID=gene-CCO35_RS03325;Name=CCO35_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03325;old_locus_tag=CCO35_03325 NZ_NPME01000001.1 Protein Homology CDS 614169 615149 . - 0 ID=cds-WP_010835725.1;Parent=gene-CCO35_RS03325;Dbxref=GenBank:WP_010835725.1;Name=WP_010835725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835725.1;locus_tag=CCO35_RS03325;product=helix-turn-helix domain-containing protein;protein_id=WP_010835725.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 615152 615376 . - . ID=gene-CCO35_RS03330;Name=CCO35_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03330;old_locus_tag=CCO35_03330 NZ_NPME01000001.1 Protein Homology CDS 615152 615376 . - 0 ID=cds-WP_001195066.1;Parent=gene-CCO35_RS03330;Dbxref=GenBank:WP_001195066.1;Name=WP_001195066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195065.1;locus_tag=CCO35_RS03330;product=hypothetical protein;protein_id=WP_001195066.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 615399 615845 . - . ID=gene-CCO35_RS03335;Name=CCO35_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03335;old_locus_tag=CCO35_03335 NZ_NPME01000001.1 Protein Homology CDS 615399 615845 . - 0 ID=cds-WP_001643782.1;Parent=gene-CCO35_RS03335;Dbxref=GenBank:WP_001643782.1;Name=WP_001643782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191079.1;locus_tag=CCO35_RS03335;product=toxin YdaT family protein;protein_id=WP_001643782.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 615910 616113 . - . ID=gene-CCO35_RS03340;Name=CCO35_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03340;old_locus_tag=CCO35_03340 NZ_NPME01000001.1 Protein Homology CDS 615910 616113 . - 0 ID=cds-WP_023228218.1;Parent=gene-CCO35_RS03340;Dbxref=GenBank:WP_023228218.1;Name=WP_023228218.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027273.6;locus_tag=CCO35_RS03340;product=Cro/CI family transcriptional regulator;protein_id=WP_023228218.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 616192 616593 . + . ID=gene-CCO35_RS03345;Name=CCO35_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03345;old_locus_tag=CCO35_03345 NZ_NPME01000001.1 Protein Homology CDS 616192 616593 . + 0 ID=cds-WP_024142132.1;Parent=gene-CCO35_RS03345;Dbxref=GenBank:WP_024142132.1;Name=WP_024142132.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016152512.1;locus_tag=CCO35_RS03345;product=helix-turn-helix domain-containing protein;protein_id=WP_024142132.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 617248 617571 . + . ID=gene-CCO35_RS03350;Name=CCO35_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03350;old_locus_tag=CCO35_03350 NZ_NPME01000001.1 Protein Homology CDS 617248 617571 . + 0 ID=cds-WP_079965624.1;Parent=gene-CCO35_RS03350;Dbxref=GenBank:WP_079965624.1;Name=WP_079965624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387852.1;locus_tag=CCO35_RS03350;product=hypothetical protein;protein_id=WP_079965624.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 617579 617824 . + . ID=gene-CCO35_RS03355;Name=CCO35_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03355;old_locus_tag=CCO35_03355 NZ_NPME01000001.1 Protein Homology CDS 617579 617824 . + 0 ID=cds-WP_039520540.1;Parent=gene-CCO35_RS03355;Dbxref=GenBank:WP_039520540.1;Name=WP_039520540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384471.1;locus_tag=CCO35_RS03355;product=hypothetical protein;protein_id=WP_039520540.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 617854 620127 . + . ID=gene-CCO35_RS03360;Name=CCO35_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03360;old_locus_tag=CCO35_03360 NZ_NPME01000001.1 Protein Homology CDS 617854 620127 . + 0 ID=cds-WP_079965625.1;Parent=gene-CCO35_RS03360;Dbxref=GenBank:WP_079965625.1;Name=WP_079965625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406028.1;locus_tag=CCO35_RS03360;product=hypothetical protein;protein_id=WP_079965625.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 620124 620678 . + . ID=gene-CCO35_RS03365;Name=CCO35_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03365;old_locus_tag=CCO35_03365 NZ_NPME01000001.1 Protein Homology CDS 620124 620678 . + 0 ID=cds-WP_000205291.1;Parent=gene-CCO35_RS03365;Dbxref=GenBank:WP_000205291.1;Name=WP_000205291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000205291.1;locus_tag=CCO35_RS03365;product=siphovirus Gp157 family protein;protein_id=WP_000205291.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 620681 620863 . + . ID=gene-CCO35_RS03370;Name=CCO35_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03370;old_locus_tag=CCO35_03370 NZ_NPME01000001.1 Protein Homology CDS 620681 620863 . + 0 ID=cds-WP_000916251.1;Parent=gene-CCO35_RS03370;Dbxref=GenBank:WP_000916251.1;Name=WP_000916251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916251.1;locus_tag=CCO35_RS03370;product=hypothetical protein;protein_id=WP_000916251.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 621076 621300 . + . ID=gene-CCO35_RS03380;Name=CCO35_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03380;old_locus_tag=CCO35_03380 NZ_NPME01000001.1 Protein Homology CDS 621076 621300 . + 0 ID=cds-WP_000196401.1;Parent=gene-CCO35_RS03380;Dbxref=GenBank:WP_000196401.1;Name=WP_000196401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374199.1;locus_tag=CCO35_RS03380;product=DUF4224 domain-containing protein;protein_id=WP_000196401.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 621301 622311 . + . ID=gene-CCO35_RS03385;Name=CCO35_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03385;old_locus_tag=CCO35_03385 NZ_NPME01000001.1 Protein Homology CDS 621301 622311 . + 0 ID=cds-WP_079965626.1;Parent=gene-CCO35_RS03385;Dbxref=GenBank:WP_079965626.1;Name=WP_079965626.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016152503.1;locus_tag=CCO35_RS03385;product=tyrosine-type recombinase/integrase;protein_id=WP_079965626.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 622339 623550 . - . ID=gene-CCO35_RS03390;Name=CCO35_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03390;old_locus_tag=CCO35_03390 NZ_NPME01000001.1 GeneMarkS-2+ CDS 622339 623550 . - 0 ID=cds-WP_079965627.1;Parent=gene-CCO35_RS03390;Dbxref=GenBank:WP_079965627.1;Name=WP_079965627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS03390;product=hypothetical protein;protein_id=WP_079965627.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 623565 624587 . - . ID=gene-CCO35_RS03395;Name=CCO35_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03395;old_locus_tag=CCO35_03395 NZ_NPME01000001.1 Protein Homology CDS 623565 624587 . - 0 ID=cds-WP_079965628.1;Parent=gene-CCO35_RS03395;Dbxref=GenBank:WP_079965628.1;Name=WP_079965628.1;Ontology_term=GO:0009295;gbkey=CDS;go_component=nucleoid|0009295||IEA;inference=COORDINATES: protein motif:HMM:NF016159.6;locus_tag=CCO35_RS03395;product=nucleoid-associated protein;protein_id=WP_079965628.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 624823 624910 . - . ID=gene-CCO35_RS03400;Name=CCO35_RS03400;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS03400;old_locus_tag=CCO35_03400 NZ_NPME01000001.1 tRNAscan-SE tRNA 624823 624910 . - . ID=rna-CCO35_RS03400;Parent=gene-CCO35_RS03400;anticodon=(pos:complement(624874..624876));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS03400;product=tRNA-Ser NZ_NPME01000001.1 tRNAscan-SE exon 624823 624910 . - . ID=exon-CCO35_RS03400-1;Parent=rna-CCO35_RS03400;anticodon=(pos:complement(624874..624876));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS03400;product=tRNA-Ser NZ_NPME01000001.1 RefSeq gene 625305 625964 . + . ID=gene-CCO35_RS03405;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=CCO35_RS03405;old_locus_tag=CCO35_03405 NZ_NPME01000001.1 Protein Homology CDS 625305 625964 . + 0 ID=cds-WP_000374046.1;Parent=gene-CCO35_RS03405;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=CCO35_RS03405;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 626051 626380 . + . ID=gene-CCO35_RS03410;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=CCO35_RS03410;old_locus_tag=CCO35_03410 NZ_NPME01000001.1 Protein Homology CDS 626051 626380 . + 0 ID=cds-WP_000904446.1;Parent=gene-CCO35_RS03410;Dbxref=GenBank:WP_000904446.1;Name=WP_000904446.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=CCO35_RS03410;product=sulfurtransferase TusE;protein_id=WP_000904446.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 626377 626658 . - . ID=gene-CCO35_RS03415;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=CCO35_RS03415;old_locus_tag=CCO35_03415 NZ_NPME01000001.1 Protein Homology CDS 626377 626658 . - 0 ID=cds-WP_000072884.1;Parent=gene-CCO35_RS03415;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=CCO35_RS03415;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 626707 627486 . - . ID=gene-CCO35_RS03420;Name=CCO35_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03420;old_locus_tag=CCO35_03420 NZ_NPME01000001.1 Protein Homology CDS 626707 627486 . - 0 ID=cds-WP_000548082.1;Parent=gene-CCO35_RS03420;Dbxref=GenBank:WP_000548082.1;Name=WP_000548082.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=CCO35_RS03420;product=helix-turn-helix transcriptional regulator;protein_id=WP_000548082.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 627512 628060 . - . ID=gene-CCO35_RS03425;Name=CCO35_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03425;old_locus_tag=CCO35_03425 NZ_NPME01000001.1 Protein Homology CDS 627512 628060 . - 0 ID=cds-WP_000859418.1;Parent=gene-CCO35_RS03425;Dbxref=GenBank:WP_000859418.1;Name=WP_000859418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=CCO35_RS03425;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_000859418.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 628275 629486 . + . ID=gene-CCO35_RS03430;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=CCO35_RS03430;old_locus_tag=CCO35_03430 NZ_NPME01000001.1 Protein Homology CDS 628275 629486 . + 0 ID=cds-WP_000140480.1;Parent=gene-CCO35_RS03430;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=CCO35_RS03430;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 629544 629861 . + . ID=gene-CCO35_RS03435;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=CCO35_RS03435;old_locus_tag=CCO35_03435 NZ_NPME01000001.1 Protein Homology CDS 629544 629861 . + 0 ID=cds-WP_000561983.1;Parent=gene-CCO35_RS03435;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=CCO35_RS03435;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 629906 630319 . - . ID=gene-CCO35_RS03440;Name=CCO35_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03440;old_locus_tag=CCO35_03440 NZ_NPME01000001.1 Protein Homology CDS 629906 630319 . - 0 ID=cds-WP_001537782.1;Parent=gene-CCO35_RS03440;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=CCO35_RS03440;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 630493 631155 . + . ID=gene-CCO35_RS03445;Name=CCO35_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03445;old_locus_tag=CCO35_03445 NZ_NPME01000001.1 Protein Homology CDS 630493 631155 . + 0 ID=cds-WP_000847732.1;Parent=gene-CCO35_RS03445;Dbxref=GenBank:WP_000847732.1;Name=WP_000847732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=CCO35_RS03445;product=DUF2057 family protein;protein_id=WP_000847732.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 631250 631708 . + . ID=gene-CCO35_RS03450;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=CCO35_RS03450;old_locus_tag=CCO35_03450 NZ_NPME01000001.1 Protein Homology CDS 631250 631708 . + 0 ID=cds-WP_000424187.1;Parent=gene-CCO35_RS03450;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=CCO35_RS03450;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 631744 633798 . - . ID=gene-CCO35_RS03455;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=CCO35_RS03455;old_locus_tag=CCO35_03455 NZ_NPME01000001.1 Protein Homology CDS 631744 633798 . - 0 ID=cds-WP_023233084.1;Parent=gene-CCO35_RS03455;Dbxref=GenBank:WP_023233084.1;Name=WP_023233084.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=CCO35_RS03455;product=DNA helicase IV;protein_id=WP_023233084.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 633922 634368 . + . ID=gene-CCO35_RS03460;Name=CCO35_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03460;old_locus_tag=CCO35_03460 NZ_NPME01000001.1 Protein Homology CDS 633922 634368 . + 0 ID=cds-WP_001261222.1;Parent=gene-CCO35_RS03460;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=CCO35_RS03460;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 634387 636540 . + . ID=gene-CCO35_RS03465;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=CCO35_RS03465;old_locus_tag=CCO35_03465 NZ_NPME01000001.1 Protein Homology CDS 634387 636540 . + 0 ID=cds-WP_023215050.1;Parent=gene-CCO35_RS03465;Dbxref=GenBank:WP_023215050.1;Name=WP_023215050.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=CCO35_RS03465;product=YccS family putative transporter;protein_id=WP_023215050.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 636527 637132 . - . ID=gene-CCO35_RS03470;Name=CCO35_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03470;old_locus_tag=CCO35_03470 NZ_NPME01000001.1 Protein Homology CDS 636527 637132 . - 0 ID=cds-WP_001202375.1;Parent=gene-CCO35_RS03470;Dbxref=GenBank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=CCO35_RS03470;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 637349 637858 . + . ID=gene-CCO35_RS03475;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=CCO35_RS03475;old_locus_tag=CCO35_03475 NZ_NPME01000001.1 Protein Homology CDS 637349 637858 . + 0 ID=cds-WP_000288732.1;Parent=gene-CCO35_RS03475;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=CCO35_RS03475;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 638215 639267 . + . ID=gene-CCO35_RS03480;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=CCO35_RS03480;old_locus_tag=CCO35_03480 NZ_NPME01000001.1 Protein Homology CDS 638215 639267 . + 0 ID=cds-WP_001562588.1;Parent=gene-CCO35_RS03480;Dbxref=GenBank:WP_001562588.1;Name=WP_001562588.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=CCO35_RS03480;product=porin OmpA;protein_id=WP_001562588.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 639339 639791 . - . ID=gene-CCO35_RS03485;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=CCO35_RS03485;old_locus_tag=CCO35_03485 NZ_NPME01000001.1 Protein Homology CDS 639339 639791 . - 0 ID=cds-WP_000877172.1;Parent=gene-CCO35_RS03485;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=CCO35_RS03485;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 639977 641737 . + . ID=gene-CCO35_RS03490;Name=CCO35_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03490;old_locus_tag=CCO35_03490 NZ_NPME01000001.1 Protein Homology CDS 639977 641737 . + 0 ID=cds-WP_000156458.1;Parent=gene-CCO35_RS03490;Dbxref=GenBank:WP_000156458.1;Name=WP_000156458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=CCO35_RS03490;product=AAA family ATPase;protein_id=WP_000156458.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 641806 642324 . + . ID=gene-CCO35_RS03495;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=CCO35_RS03495;old_locus_tag=CCO35_03495 NZ_NPME01000001.1 Protein Homology CDS 641806 642324 . + 0 ID=cds-WP_000227928.1;Parent=gene-CCO35_RS03495;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=CCO35_RS03495;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 642424 642591 . - . ID=gene-CCO35_RS03500;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=CCO35_RS03500;old_locus_tag=CCO35_03500 NZ_NPME01000001.1 Protein Homology CDS 642424 642591 . - 0 ID=cds-WP_001537784.1;Parent=gene-CCO35_RS03500;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=CCO35_RS03500;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 642847 643410 . - . ID=gene-CCO35_RS03505;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=CCO35_RS03505;old_locus_tag=CCO35_03505 NZ_NPME01000001.1 Protein Homology CDS 642847 643410 . - 0 ID=cds-WP_000759136.1;Parent=gene-CCO35_RS03505;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=CCO35_RS03505;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 643407 645047 . - . ID=gene-CCO35_RS03510;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=CCO35_RS03510;old_locus_tag=CCO35_03510 NZ_NPME01000001.1 Protein Homology CDS 643407 645047 . - 0 ID=cds-WP_000433412.1;Parent=gene-CCO35_RS03510;Dbxref=GenBank:WP_000433412.1;Name=WP_000433412.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=CCO35_RS03510;product=intermembrane transport protein PqiB;protein_id=WP_000433412.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 645052 646305 . - . ID=gene-CCO35_RS03515;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=CCO35_RS03515;old_locus_tag=CCO35_03515 NZ_NPME01000001.1 Protein Homology CDS 645052 646305 . - 0 ID=cds-WP_000333143.1;Parent=gene-CCO35_RS03515;Dbxref=GenBank:WP_000333143.1;Name=WP_000333143.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=CCO35_RS03515;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333143.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 646320 648227 . - . ID=gene-CCO35_RS03520;Name=CCO35_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03520;old_locus_tag=CCO35_03520 NZ_NPME01000001.1 Protein Homology CDS 646320 648227 . - 0 ID=cds-WP_000053043.1;Parent=gene-CCO35_RS03520;Dbxref=GenBank:WP_000053043.1;Name=WP_000053043.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=CCO35_RS03520;product=ABC transporter ATP-binding protein;protein_id=WP_000053043.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 648240 650348 . - . ID=gene-CCO35_RS03525;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=CCO35_RS03525;old_locus_tag=CCO35_03525 NZ_NPME01000001.1 Protein Homology CDS 648240 650348 . - 0 ID=cds-WP_001086481.1;Parent=gene-CCO35_RS03525;Dbxref=GenBank:WP_001086481.1;Name=WP_001086481.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=CCO35_RS03525;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086481.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 650447 651556 . + . ID=gene-CCO35_RS03530;Name=CCO35_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03530;old_locus_tag=CCO35_03530 NZ_NPME01000001.1 Protein Homology CDS 650447 651556 . + 0 ID=cds-WP_000224062.1;Parent=gene-CCO35_RS03530;Dbxref=GenBank:WP_000224062.1;Name=WP_000224062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=CCO35_RS03530;product=YcbX family protein;protein_id=WP_000224062.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 651553 652095 . - . ID=gene-CCO35_RS03535;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=CCO35_RS03535;old_locus_tag=CCO35_03535 NZ_NPME01000001.1 Protein Homology CDS 651553 652095 . - 0 ID=cds-WP_001220671.1;Parent=gene-CCO35_RS03535;Dbxref=GenBank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=CCO35_RS03535;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 652261 653271 . - . ID=gene-CCO35_RS03540;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=CCO35_RS03540;old_locus_tag=CCO35_03540 NZ_NPME01000001.1 Protein Homology CDS 652261 653271 . - 0 ID=cds-WP_000291723.1;Parent=gene-CCO35_RS03540;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=CCO35_RS03540;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 653479 656091 . - . ID=gene-CCO35_RS03545;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=CCO35_RS03545;old_locus_tag=CCO35_03545 NZ_NPME01000001.1 Protein Homology CDS 653479 656091 . - 0 ID=cds-WP_001643736.1;Parent=gene-CCO35_RS03545;Dbxref=GenBank:WP_001643736.1;Name=WP_001643736.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=CCO35_RS03545;product=aminopeptidase N;protein_id=WP_001643736.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 656518 656724 . + . ID=gene-CCO35_RS03550;Name=CCO35_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03550;old_locus_tag=CCO35_03550 NZ_NPME01000001.1 Protein Homology CDS 656518 656724 . + 0 ID=cds-WP_000497440.1;Parent=gene-CCO35_RS03550;Dbxref=GenBank:WP_000497440.1;Name=WP_000497440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497442.1;locus_tag=CCO35_RS03550;product=DinI-like family protein;protein_id=WP_000497440.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 656852 657208 . - . ID=gene-CCO35_RS03555;Name=CCO35_RS03555;end_range=657208,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS03555;old_locus_tag=CCO35_03555;partial=true;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 656852 657208 . - 0 ID=cds-CCO35_RS03555;Parent=gene-CCO35_RS03555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=657208,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664281.1;locus_tag=CCO35_RS03555;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 657417 658619 . + . ID=gene-CCO35_RS03560;Name=CCO35_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03560;old_locus_tag=CCO35_03560 NZ_NPME01000001.1 Protein Homology CDS 657417 658619 . + 0 ID=cds-WP_000776343.1;Parent=gene-CCO35_RS03560;Dbxref=GenBank:WP_000776343.1;Name=WP_000776343.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595695.1;locus_tag=CCO35_RS03560;product=multidrug effflux MFS transporter;protein_id=WP_000776343.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 658753 658992 . + . ID=gene-CCO35_RS03565;Name=CCO35_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03565;old_locus_tag=CCO35_03565 NZ_NPME01000001.1 Protein Homology CDS 658753 658992 . + 0 ID=cds-WP_031604817.1;Parent=gene-CCO35_RS03565;Dbxref=GenBank:WP_031604817.1;Name=WP_031604817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002431983.1;locus_tag=CCO35_RS03565;product=DinI-like family protein;protein_id=WP_031604817.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 659061 660191 . - . ID=gene-CCO35_RS03570;Name=CCO35_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03570;old_locus_tag=CCO35_03570 NZ_NPME01000001.1 Protein Homology CDS 659061 660191 . - 0 ID=cds-WP_023137449.1;Parent=gene-CCO35_RS03570;Dbxref=GenBank:WP_023137449.1;Name=WP_023137449.1;Ontology_term=GO:0019062,GO:0046718,GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063108.1;locus_tag=CCO35_RS03570;product=tail fiber domain-containing protein;protein_id=WP_023137449.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 660202 661161 . - . ID=gene-CCO35_RS03575;Name=CCO35_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03575;old_locus_tag=CCO35_03575 NZ_NPME01000001.1 Protein Homology CDS 660202 661161 . - 0 ID=cds-WP_001113925.1;Parent=gene-CCO35_RS03575;Dbxref=GenBank:WP_001113925.1;Name=WP_001113925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835813.1;locus_tag=CCO35_RS03575;product=DUF6453 family protein;protein_id=WP_001113925.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 661170 663890 . - . ID=gene-CCO35_RS03580;Name=CCO35_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03580;old_locus_tag=CCO35_03580 NZ_NPME01000001.1 Protein Homology CDS 661170 663890 . - 0 ID=cds-WP_094965309.1;Parent=gene-CCO35_RS03580;Dbxref=GenBank:WP_094965309.1;Name=WP_094965309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150470.1;locus_tag=CCO35_RS03580;product=phage tail tip protein J-related protein;protein_id=WP_094965309.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 663890 664288 . - . ID=gene-CCO35_RS03585;Name=CCO35_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03585;old_locus_tag=CCO35_03585 NZ_NPME01000001.1 Protein Homology CDS 663890 664288 . - 0 ID=cds-WP_080100481.1;Parent=gene-CCO35_RS03585;Dbxref=GenBank:WP_080100481.1;Name=WP_080100481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150471.1;locus_tag=CCO35_RS03585;product=DUF6950 family protein;protein_id=WP_080100481.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 664295 664879 . - . ID=gene-CCO35_RS03590;Name=CCO35_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03590;old_locus_tag=CCO35_03590 NZ_NPME01000001.1 Protein Homology CDS 664295 664879 . - 0 ID=cds-WP_023252582.1;Parent=gene-CCO35_RS03590;Dbxref=GenBank:WP_023252582.1;Name=WP_023252582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150472.1;locus_tag=CCO35_RS03590;product=hypothetical protein;protein_id=WP_023252582.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 664879 665472 . - . ID=gene-CCO35_RS03595;Name=CCO35_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03595;old_locus_tag=CCO35_03595 NZ_NPME01000001.1 Protein Homology CDS 664879 665472 . - 0 ID=cds-WP_010835817.1;Parent=gene-CCO35_RS03595;Dbxref=GenBank:WP_010835817.1;Name=WP_010835817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003841701.1;locus_tag=CCO35_RS03595;product=hypothetical protein;protein_id=WP_010835817.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 665635 665856 . + . ID=gene-CCO35_RS23570;Name=CCO35_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23570 NZ_NPME01000001.1 GeneMarkS-2+ CDS 665635 665856 . + 0 ID=cds-WP_088730722.1;Parent=gene-CCO35_RS23570;Dbxref=GenBank:WP_088730722.1;Name=WP_088730722.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS23570;product=hypothetical protein;protein_id=WP_088730722.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 665824 666180 . - . ID=gene-CCO35_RS03600;Name=CCO35_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03600;old_locus_tag=CCO35_03600 NZ_NPME01000001.1 Protein Homology CDS 665824 666180 . - 0 ID=cds-WP_237589495.1;Parent=gene-CCO35_RS03600;Dbxref=GenBank:WP_237589495.1;Name=WP_237589495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552342.1;locus_tag=CCO35_RS03600;product=hypothetical protein;protein_id=WP_237589495.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 666226 669516 . - . ID=gene-CCO35_RS03605;Name=CCO35_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03605;old_locus_tag=CCO35_03605 NZ_NPME01000001.1 Protein Homology CDS 666226 669516 . - 0 ID=cds-WP_094965310.1;Parent=gene-CCO35_RS03605;Dbxref=GenBank:WP_094965310.1;Name=WP_094965310.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150475.1;locus_tag=CCO35_RS03605;product=phage tail tape measure protein;protein_id=WP_094965310.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 669549 670004 . - . ID=gene-CCO35_RS23575;Name=CCO35_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23575 NZ_NPME01000001.1 GeneMarkS-2+ CDS 669549 670004 . - 0 ID=cds-WP_001805532.1;Parent=gene-CCO35_RS23575;Dbxref=GenBank:WP_001805532.1;Name=WP_001805532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS23575;product=hypothetical protein;protein_id=WP_001805532.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 670058 670348 . - . ID=gene-CCO35_RS03610;Name=CCO35_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03610;old_locus_tag=CCO35_03610 NZ_NPME01000001.1 Protein Homology CDS 670058 670348 . - 0 ID=cds-WP_001211645.1;Parent=gene-CCO35_RS03610;Dbxref=GenBank:WP_001211645.1;Name=WP_001211645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001211639.1;locus_tag=CCO35_RS03610;product=phage tail assembly protein T;protein_id=WP_001211645.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 670360 670731 . - . ID=gene-CCO35_RS03615;Name=CCO35_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03615;old_locus_tag=CCO35_03615 NZ_NPME01000001.1 Protein Homology CDS 670360 670731 . - 0 ID=cds-WP_001129938.1;Parent=gene-CCO35_RS03615;Dbxref=GenBank:WP_001129938.1;Name=WP_001129938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001129939.1;locus_tag=CCO35_RS03615;product=phage tail assembly chaperone;protein_id=WP_001129938.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 670759 671463 . - . ID=gene-CCO35_RS03620;Name=CCO35_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03620;old_locus_tag=CCO35_03620 NZ_NPME01000001.1 Protein Homology CDS 670759 671463 . - 0 ID=cds-WP_053521184.1;Parent=gene-CCO35_RS03620;Dbxref=GenBank:WP_053521184.1;Name=WP_053521184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001735010.1;locus_tag=CCO35_RS03620;product=immunoglobulin domain-containing protein;protein_id=WP_053521184.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 671521 671868 . - . ID=gene-CCO35_RS03625;Name=gp17;gbkey=Gene;gene=gp17;gene_biotype=protein_coding;locus_tag=CCO35_RS03625;old_locus_tag=CCO35_03625 NZ_NPME01000001.1 Protein Homology CDS 671521 671868 . - 0 ID=cds-WP_000133674.1;Parent=gene-CCO35_RS03625;Dbxref=GenBank:WP_000133674.1;Name=WP_000133674.1;gbkey=CDS;gene=gp17;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209397.1;locus_tag=CCO35_RS03625;product=tail completion protein gp17;protein_id=WP_000133674.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 671865 672314 . - . ID=gene-CCO35_RS03630;Name=CCO35_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03630;old_locus_tag=CCO35_03630 NZ_NPME01000001.1 Protein Homology CDS 671865 672314 . - 0 ID=cds-WP_000573486.1;Parent=gene-CCO35_RS03630;Dbxref=GenBank:WP_000573486.1;Name=WP_000573486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573485.1;locus_tag=CCO35_RS03630;product=HK97-gp10 family putative phage morphogenesis protein;protein_id=WP_000573486.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 672311 672649 . - . ID=gene-CCO35_RS03635;Name=CCO35_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03635;old_locus_tag=CCO35_03635 NZ_NPME01000001.1 Protein Homology CDS 672311 672649 . - 0 ID=cds-WP_020898872.1;Parent=gene-CCO35_RS03635;Dbxref=GenBank:WP_020898872.1;Name=WP_020898872.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147823.1;locus_tag=CCO35_RS03635;product=phage head closure protein;protein_id=WP_020898872.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 672659 672985 . - . ID=gene-CCO35_RS03640;Name=CCO35_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03640;old_locus_tag=CCO35_03640 NZ_NPME01000001.1 Protein Homology CDS 672659 672985 . - 0 ID=cds-WP_001648719.1;Parent=gene-CCO35_RS03640;Dbxref=GenBank:WP_001648719.1;Name=WP_001648719.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063100.1;locus_tag=CCO35_RS03640;product=head-tail connector protein;protein_id=WP_001648719.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 672985 673236 . - . ID=gene-CCO35_RS23775;Name=CCO35_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23775 NZ_NPME01000001.1 Protein Homology CDS 672985 673236 . - 0 ID=cds-WP_058799682.1;Parent=gene-CCO35_RS23775;Dbxref=GenBank:WP_058799682.1;Name=WP_058799682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004886700.1;locus_tag=CCO35_RS23775;product=hypothetical protein;protein_id=WP_058799682.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 673280 674497 . - . ID=gene-CCO35_RS03650;Name=CCO35_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03650;old_locus_tag=CCO35_03650 NZ_NPME01000001.1 Protein Homology CDS 673280 674497 . - 0 ID=cds-WP_001648716.1;Parent=gene-CCO35_RS03650;Dbxref=GenBank:WP_001648716.1;Name=WP_001648716.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005722.1;locus_tag=CCO35_RS03650;product=phage major capsid protein;protein_id=WP_001648716.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 674507 675355 . - . ID=gene-CCO35_RS03655;Name=CCO35_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03655;old_locus_tag=CCO35_03655 NZ_NPME01000001.1 Protein Homology CDS 674507 675355 . - 0 ID=cds-WP_000039020.1;Parent=gene-CCO35_RS03655;Dbxref=GenBank:WP_000039020.1;Name=WP_000039020.1;Ontology_term=GO:0046797,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=viral procapsid maturation|0046797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039021.1;locus_tag=CCO35_RS03655;product=head maturation protease%2C ClpP-related;protein_id=WP_000039020.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 675369 676673 . - . ID=gene-CCO35_RS03660;Name=CCO35_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03660;old_locus_tag=CCO35_03660 NZ_NPME01000001.1 Protein Homology CDS 675369 676673 . - 0 ID=cds-WP_000002707.1;Parent=gene-CCO35_RS03660;Dbxref=GenBank:WP_000002707.1;Name=WP_000002707.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001107324.1;locus_tag=CCO35_RS03660;product=phage portal protein;protein_id=WP_000002707.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 676673 678415 . - . ID=gene-CCO35_RS03665;Name=CCO35_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03665;old_locus_tag=CCO35_03665 NZ_NPME01000001.1 Protein Homology CDS 676673 678415 . - 0 ID=cds-WP_023194832.1;Parent=gene-CCO35_RS03665;Dbxref=GenBank:WP_023194832.1;Name=WP_023194832.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177157.1;locus_tag=CCO35_RS03665;product=terminase large subunit;protein_id=WP_023194832.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 678369 678833 . - . ID=gene-CCO35_RS03670;Name=CCO35_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03670;old_locus_tag=CCO35_03670 NZ_NPME01000001.1 Protein Homology CDS 678369 678833 . - 0 ID=cds-WP_000919036.1;Parent=gene-CCO35_RS03670;Dbxref=GenBank:WP_000919036.1;Name=WP_000919036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120642.1;locus_tag=CCO35_RS03670;product=phage terminase small subunit P27 family;protein_id=WP_000919036.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 678966 679310 . - . ID=gene-CCO35_RS03675;Name=CCO35_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03675;old_locus_tag=CCO35_03675 NZ_NPME01000001.1 Protein Homology CDS 678966 679310 . - 0 ID=cds-WP_023137451.1;Parent=gene-CCO35_RS03675;Dbxref=GenBank:WP_023137451.1;Name=WP_023137451.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749169.1;locus_tag=CCO35_RS03675;product=HNH endonuclease;protein_id=WP_023137451.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 679378 679755 . - . ID=gene-CCO35_RS03680;Name=CCO35_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03680;old_locus_tag=CCO35_03680 NZ_NPME01000001.1 Protein Homology CDS 679378 679755 . - 0 ID=cds-WP_000495546.1;Parent=gene-CCO35_RS03680;Dbxref=GenBank:WP_000495546.1;Name=WP_000495546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000495545.1;locus_tag=CCO35_RS03680;product=hypothetical protein;protein_id=WP_000495546.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 679798 680337 . - . ID=gene-CCO35_RS03685;Name=CCO35_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03685;old_locus_tag=CCO35_03685 NZ_NPME01000001.1 Protein Homology CDS 679798 680337 . - 0 ID=cds-WP_001050802.1;Parent=gene-CCO35_RS03685;Dbxref=GenBank:WP_001050802.1;Name=WP_001050802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050879.1;locus_tag=CCO35_RS03685;product=DUF2514 domain-containing protein;protein_id=WP_001050802.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 680334 680948 . - . ID=gene-CCO35_RS03690;Name=CCO35_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03690;old_locus_tag=CCO35_03690 NZ_NPME01000001.1 Protein Homology CDS 680334 680948 . - 0 ID=cds-WP_053530270.1;Parent=gene-CCO35_RS03690;Dbxref=GenBank:WP_053530270.1;Name=WP_053530270.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=CCO35_RS03690;product=glycoside hydrolase family 19 protein;protein_id=WP_053530270.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 680948 681229 . - . ID=gene-CCO35_RS03695;Name=CCO35_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03695;old_locus_tag=CCO35_03695 NZ_NPME01000001.1 Protein Homology CDS 680948 681229 . - 0 ID=cds-WP_000226307.1;Parent=gene-CCO35_RS03695;Dbxref=GenBank:WP_000226307.1;Name=WP_000226307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899663.1;locus_tag=CCO35_RS03695;product=phage holin family protein;protein_id=WP_000226307.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 681216 681605 . - . ID=gene-CCO35_RS03700;Name=CCO35_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03700;old_locus_tag=CCO35_03700 NZ_NPME01000001.1 Protein Homology CDS 681216 681605 . - 0 ID=cds-WP_053530269.1;Parent=gene-CCO35_RS03700;Dbxref=GenBank:WP_053530269.1;Name=WP_053530269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001294874.1;locus_tag=CCO35_RS03700;product=phage holin family protein;protein_id=WP_053530269.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 681692 681880 . - . ID=gene-CCO35_RS03705;Name=CCO35_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03705;old_locus_tag=CCO35_03705 NZ_NPME01000001.1 Protein Homology CDS 681692 681880 . - 0 ID=cds-WP_000657897.1;Parent=gene-CCO35_RS03705;Dbxref=GenBank:WP_000657897.1;Name=WP_000657897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000657897.1;locus_tag=CCO35_RS03705;product=hypothetical protein;protein_id=WP_000657897.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 681969 682045 . - . ID=gene-CCO35_RS03710;Name=CCO35_RS03710;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS03710;old_locus_tag=CCO35_03710 NZ_NPME01000001.1 tRNAscan-SE tRNA 681969 682045 . - . ID=rna-CCO35_RS03710;Parent=gene-CCO35_RS03710;anticodon=(pos:complement(682009..682011));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS03710;product=tRNA-Arg NZ_NPME01000001.1 tRNAscan-SE exon 681969 682045 . - . ID=exon-CCO35_RS03710-1;Parent=rna-CCO35_RS03710;anticodon=(pos:complement(682009..682011));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS03710;product=tRNA-Arg NZ_NPME01000001.1 RefSeq gene 682370 683059 . - . ID=gene-CCO35_RS03715;Name=CCO35_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03715;old_locus_tag=CCO35_03715 NZ_NPME01000001.1 Protein Homology CDS 682370 683059 . - 0 ID=cds-WP_094965312.1;Parent=gene-CCO35_RS03715;Dbxref=GenBank:WP_094965312.1;Name=WP_094965312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097218.1;locus_tag=CCO35_RS03715;product=bacteriophage antitermination protein Q;protein_id=WP_094965312.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 683056 683196 . - . ID=gene-CCO35_RS03720;Name=CCO35_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03720;old_locus_tag=CCO35_03720 NZ_NPME01000001.1 Protein Homology CDS 683056 683196 . - 0 ID=cds-WP_000801757.1;Parent=gene-CCO35_RS03720;Dbxref=GenBank:WP_000801757.1;Name=WP_000801757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461553.1;locus_tag=CCO35_RS03720;product=YlcG family protein;protein_id=WP_000801757.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 683193 683804 . - . ID=gene-CCO35_RS03725;Name=CCO35_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03725;old_locus_tag=CCO35_03725 NZ_NPME01000001.1 Protein Homology CDS 683193 683804 . - 0 ID=cds-WP_094965313.1;Parent=gene-CCO35_RS03725;Dbxref=GenBank:WP_094965313.1;Name=WP_094965313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461554.1;locus_tag=CCO35_RS03725;product=recombination protein NinG;protein_id=WP_094965313.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 683807 684012 . - . ID=gene-CCO35_RS23935;Name=CCO35_RS23935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23935;old_locus_tag=CCO35_03730;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 683807 684012 . - 0 ID=cds-CCO35_RS23935;Parent=gene-CCO35_RS23935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528771.1;locus_tag=CCO35_RS23935;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 684012 684614 . - . ID=gene-CCO35_RS03735;Name=CCO35_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03735;old_locus_tag=CCO35_03735 NZ_NPME01000001.1 Protein Homology CDS 684012 684614 . - 0 ID=cds-WP_000929790.1;Parent=gene-CCO35_RS03735;Dbxref=GenBank:WP_000929790.1;Name=WP_000929790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459995.1;locus_tag=CCO35_RS03735;product=DUF1367 family protein;protein_id=WP_000929790.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 684949 685188 . - . ID=gene-CCO35_RS03745;Name=CCO35_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03745;old_locus_tag=CCO35_03745 NZ_NPME01000001.1 Protein Homology CDS 684949 685188 . - 0 ID=cds-WP_001217670.1;Parent=gene-CCO35_RS03745;Dbxref=GenBank:WP_001217670.1;Name=WP_001217670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217670.1;locus_tag=CCO35_RS03745;product=DinI family protein;protein_id=WP_001217670.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 685380 685661 . - . ID=gene-CCO35_RS24225;Name=CCO35_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24225;old_locus_tag=CCO35_03750 NZ_NPME01000001.1 Protein Homology CDS 685380 685661 . - 0 ID=cds-WP_071530012.1;Parent=gene-CCO35_RS24225;Dbxref=GenBank:WP_071530012.1;Name=WP_071530012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045204.3;locus_tag=CCO35_RS24225;product=hypothetical protein;protein_id=WP_071530012.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 685837 686049 . - . ID=gene-CCO35_RS03755;Name=CCO35_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03755;old_locus_tag=CCO35_03755 NZ_NPME01000001.1 GeneMarkS-2+ CDS 685837 686049 . - 0 ID=cds-WP_052324024.1;Parent=gene-CCO35_RS03755;Dbxref=GenBank:WP_052324024.1;Name=WP_052324024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS03755;product=hypothetical protein;protein_id=WP_052324024.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 686053 686526 . - . ID=gene-CCO35_RS03760;Name=CCO35_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03760;old_locus_tag=CCO35_03760 NZ_NPME01000001.1 Protein Homology CDS 686053 686526 . - 0 ID=cds-WP_000445792.1;Parent=gene-CCO35_RS03760;Dbxref=GenBank:WP_000445792.1;Name=WP_000445792.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840609.1;locus_tag=CCO35_RS03760;product=class I SAM-dependent methyltransferase;protein_id=WP_000445792.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 686526 687050 . - . ID=gene-CCO35_RS03765;Name=CCO35_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03765;old_locus_tag=CCO35_03765 NZ_NPME01000001.1 Protein Homology CDS 686526 687050 . - 0 ID=cds-WP_000065104.1;Parent=gene-CCO35_RS03765;Dbxref=GenBank:WP_000065104.1;Name=WP_000065104.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025303.6;locus_tag=CCO35_RS03765;product=ead/Ea22-like family protein;protein_id=WP_000065104.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 687047 687394 . - . ID=gene-CCO35_RS03770;Name=CCO35_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03770;old_locus_tag=CCO35_03770 NZ_NPME01000001.1 Protein Homology CDS 687047 687394 . - 0 ID=cds-WP_000113623.1;Parent=gene-CCO35_RS03770;Dbxref=GenBank:WP_000113623.1;Name=WP_000113623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459991.1;locus_tag=CCO35_RS03770;product=DUF977 family protein;protein_id=WP_000113623.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 687405 688154 . - . ID=gene-CCO35_RS03775;Name=CCO35_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03775;old_locus_tag=CCO35_03775 NZ_NPME01000001.1 Protein Homology CDS 687405 688154 . - 0 ID=cds-WP_000800010.1;Parent=gene-CCO35_RS03775;Dbxref=GenBank:WP_000800010.1;Name=WP_000800010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459990.1;locus_tag=CCO35_RS03775;product=ATP-binding protein;protein_id=WP_000800010.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 688157 689140 . - . ID=gene-CCO35_RS03780;Name=CCO35_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03780;old_locus_tag=CCO35_03780 NZ_NPME01000001.1 Protein Homology CDS 688157 689140 . - 0 ID=cds-WP_042949490.1;Parent=gene-CCO35_RS03780;Dbxref=GenBank:WP_042949490.1;Name=WP_042949490.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459989.1;locus_tag=CCO35_RS03780;product=replication protein;protein_id=WP_042949490.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 689225 689599 . - . ID=gene-CCO35_RS03785;Name=CCO35_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03785;old_locus_tag=CCO35_03785 NZ_NPME01000001.1 Protein Homology CDS 689225 689599 . - 0 ID=cds-WP_001574095.1;Parent=gene-CCO35_RS03785;Dbxref=GenBank:WP_001574095.1;Name=WP_001574095.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459988.1;locus_tag=CCO35_RS03785;product=CII family transcriptional regulator;protein_id=WP_001574095.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 689565 689801 . - . ID=gene-CCO35_RS03790;Name=CCO35_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03790;old_locus_tag=CCO35_03790 NZ_NPME01000001.1 Protein Homology CDS 689565 689801 . - 0 ID=cds-WP_000869364.1;Parent=gene-CCO35_RS03790;Dbxref=GenBank:WP_000869364.1;Name=WP_000869364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000869364.1;locus_tag=CCO35_RS03790;product=transcriptional regulator;protein_id=WP_000869364.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 689931 690335 . + . ID=gene-CCO35_RS03795;Name=CCO35_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03795;old_locus_tag=CCO35_03795 NZ_NPME01000001.1 Protein Homology CDS 689931 690335 . + 0 ID=cds-WP_001009038.1;Parent=gene-CCO35_RS03795;Dbxref=GenBank:WP_001009038.1;Name=WP_001009038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009036.1;locus_tag=CCO35_RS03795;product=transcriptional regulator;protein_id=WP_001009038.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 690586 690741 . + . ID=gene-CCO35_RS23940;Name=CCO35_RS23940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23940;partial=true;pseudo=true;start_range=.,690586 NZ_NPME01000001.1 Protein Homology CDS 690586 690741 . + 0 ID=cds-CCO35_RS23940;Parent=gene-CCO35_RS23940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461564.1;locus_tag=CCO35_RS23940;partial=true;product=hypothetical protein;pseudo=true;start_range=.,690586;transl_table=11 NZ_NPME01000001.1 RefSeq gene 690734 690904 . + . ID=gene-CCO35_RS23780;Name=CCO35_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23780;old_locus_tag=CCO35_03800 NZ_NPME01000001.1 Protein Homology CDS 690734 690904 . + 0 ID=cds-WP_000551857.1;Parent=gene-CCO35_RS23780;Dbxref=GenBank:WP_000551857.1;Name=WP_000551857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551857.1;locus_tag=CCO35_RS23780;product=YdaE family protein;protein_id=WP_000551857.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 691045 693972 . + . ID=gene-CCO35_RS03805;Name=CCO35_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03805;old_locus_tag=CCO35_03805 NZ_NPME01000001.1 Protein Homology CDS 691045 693972 . + 0 ID=cds-WP_094965314.1;Parent=gene-CCO35_RS03805;Dbxref=GenBank:WP_094965314.1;Name=WP_094965314.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394221.1;locus_tag=CCO35_RS03805;product=RecE family exodeoxyribonuclease;protein_id=WP_094965314.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 693935 695092 . + . ID=gene-CCO35_RS03810;Name=CCO35_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03810;old_locus_tag=CCO35_03810 NZ_NPME01000001.1 Protein Homology CDS 693935 695092 . + 0 ID=cds-WP_001539618.1;Parent=gene-CCO35_RS03810;Dbxref=GenBank:WP_001539618.1;Name=WP_001539618.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459983.3;locus_tag=CCO35_RS03810;product=RecT family recombinase;protein_id=WP_001539618.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 695135 695374 . + . ID=gene-CCO35_RS03815;Name=CCO35_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03815;old_locus_tag=CCO35_03815 NZ_NPME01000001.1 Protein Homology CDS 695135 695374 . + 0 ID=cds-WP_001237031.1;Parent=gene-CCO35_RS03815;Dbxref=GenBank:WP_001237031.1;Name=WP_001237031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459982.1;locus_tag=CCO35_RS03815;product=DUF4060 family protein;protein_id=WP_001237031.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 695415 695663 . + . ID=gene-CCO35_RS03820;Name=xis;gbkey=Gene;gene=xis;gene_biotype=protein_coding;locus_tag=CCO35_RS03820;old_locus_tag=CCO35_03820 NZ_NPME01000001.1 Protein Homology CDS 695415 695663 . + 0 ID=cds-WP_000065276.1;Parent=gene-CCO35_RS03820;Dbxref=GenBank:WP_000065276.1;Name=WP_000065276.1;gbkey=CDS;gene=xis;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459981.1;locus_tag=CCO35_RS03820;product=excisionase Xis;protein_id=WP_000065276.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 695708 697000 . + . ID=gene-CCO35_RS03825;Name=int;gbkey=Gene;gene=int;gene_biotype=protein_coding;locus_tag=CCO35_RS03825;old_locus_tag=CCO35_03825 NZ_NPME01000001.1 Protein Homology CDS 695708 697000 . + 0 ID=cds-WP_094965315.1;Parent=gene-CCO35_RS03825;Dbxref=GenBank:WP_094965315.1;Name=WP_094965315.1;gbkey=CDS;gene=int;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459980.1;locus_tag=CCO35_RS03825;product=FimB-specific integrase Int;protein_id=WP_094965315.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 697195 698397 . + . ID=gene-CCO35_RS03830;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=CCO35_RS03830;old_locus_tag=CCO35_03830 NZ_NPME01000001.1 Protein Homology CDS 697195 698397 . + 0 ID=cds-WP_000191405.1;Parent=gene-CCO35_RS03830;Dbxref=GenBank:WP_000191405.1;Name=WP_000191405.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=CCO35_RS03830;product=nicotinate phosphoribosyltransferase;protein_id=WP_000191405.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 698567 699967 . + . ID=gene-CCO35_RS03835;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CCO35_RS03835;old_locus_tag=CCO35_03835 NZ_NPME01000001.1 Protein Homology CDS 698567 699967 . + 0 ID=cds-WP_000117870.1;Parent=gene-CCO35_RS03835;Dbxref=GenBank:WP_000117870.1;Name=WP_000117870.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=CCO35_RS03835;product=asparagine--tRNA ligase;protein_id=WP_000117870.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 700574 701665 . + . ID=gene-CCO35_RS03840;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=CCO35_RS03840;old_locus_tag=CCO35_03840 NZ_NPME01000001.1 Protein Homology CDS 700574 701665 . + 0 ID=cds-WP_000977709.1;Parent=gene-CCO35_RS03840;Dbxref=GenBank:WP_000977709.1;Name=WP_000977709.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=CCO35_RS03840;product=porin OmpF;protein_id=WP_000977709.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 701850 703040 . + . ID=gene-CCO35_RS03845;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=CCO35_RS03845;old_locus_tag=CCO35_03845 NZ_NPME01000001.1 Protein Homology CDS 701850 703040 . + 0 ID=cds-WP_000462649.1;Parent=gene-CCO35_RS03845;Dbxref=GenBank:WP_000462649.1;Name=WP_000462649.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=CCO35_RS03845;product=aspartate transaminase;protein_id=WP_000462649.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 703102 703749 . - . ID=gene-CCO35_RS03850;Name=CCO35_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03850;old_locus_tag=CCO35_03850 NZ_NPME01000001.1 Protein Homology CDS 703102 703749 . - 0 ID=cds-WP_001109471.1;Parent=gene-CCO35_RS03850;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=CCO35_RS03850;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 703777 704325 . - . ID=gene-CCO35_RS03855;Name=CCO35_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03855;old_locus_tag=CCO35_03855 NZ_NPME01000001.1 Protein Homology CDS 703777 704325 . - 0 ID=cds-WP_000357052.1;Parent=gene-CCO35_RS03855;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=CCO35_RS03855;product=YcbK family protein;protein_id=WP_000357052.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 704586 706433 . - . ID=gene-CCO35_RS03865;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=CCO35_RS03865;old_locus_tag=CCO35_03865 NZ_NPME01000001.1 Protein Homology CDS 704586 706433 . - 0 ID=cds-WP_023215057.1;Parent=gene-CCO35_RS03865;Dbxref=GenBank:WP_023215057.1;Name=WP_023215057.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=CCO35_RS03865;product=L%2CD-transpeptidase;protein_id=WP_023215057.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 706778 711244 . - . ID=gene-CCO35_RS03870;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=CCO35_RS03870;old_locus_tag=CCO35_03870 NZ_NPME01000001.1 Protein Homology CDS 706778 711244 . - 0 ID=cds-WP_023197182.1;Parent=gene-CCO35_RS03870;Dbxref=GenBank:WP_023197182.1;Name=WP_023197182.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=CCO35_RS03870;product=chromosome partition protein MukB;protein_id=WP_023197182.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 711244 711948 . - . ID=gene-CCO35_RS03875;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=CCO35_RS03875;old_locus_tag=CCO35_03875 NZ_NPME01000001.1 Protein Homology CDS 711244 711948 . - 0 ID=cds-WP_000060025.1;Parent=gene-CCO35_RS03875;Dbxref=GenBank:WP_000060025.1;Name=WP_000060025.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=CCO35_RS03875;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 711929 713251 . - . ID=gene-CCO35_RS03880;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=CCO35_RS03880;old_locus_tag=CCO35_03880 NZ_NPME01000001.1 Protein Homology CDS 711929 713251 . - 0 ID=cds-WP_001288828.1;Parent=gene-CCO35_RS03880;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=CCO35_RS03880;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 713244 714047 . - . ID=gene-CCO35_RS03885;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=CCO35_RS03885;old_locus_tag=CCO35_03885 NZ_NPME01000001.1 Protein Homology CDS 713244 714047 . - 0 ID=cds-WP_001154025.1;Parent=gene-CCO35_RS03885;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=CCO35_RS03885;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 714183 714959 . + . ID=gene-CCO35_RS03895;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=CCO35_RS03895;old_locus_tag=CCO35_03895 NZ_NPME01000001.1 Protein Homology CDS 714183 714959 . + 0 ID=cds-WP_000899567.1;Parent=gene-CCO35_RS03895;Dbxref=GenBank:WP_000899567.1;Name=WP_000899567.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=CCO35_RS03895;product=envelope biogenesis factor ElyC;protein_id=WP_000899567.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 714939 715832 . - . ID=gene-CCO35_RS03900;Name=CCO35_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03900;old_locus_tag=CCO35_03900 NZ_NPME01000001.1 Protein Homology CDS 714939 715832 . - 0 ID=cds-WP_000436893.1;Parent=gene-CCO35_RS03900;Dbxref=GenBank:WP_000436893.1;Name=WP_000436893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=CCO35_RS03900;product=YcbJ family phosphotransferase;protein_id=WP_000436893.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 716043 716789 . - . ID=gene-CCO35_RS03905;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=CCO35_RS03905;old_locus_tag=CCO35_03905 NZ_NPME01000001.1 Protein Homology CDS 716043 716789 . - 0 ID=cds-WP_000011578.1;Parent=gene-CCO35_RS03905;Dbxref=GenBank:WP_000011578.1;Name=WP_000011578.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=CCO35_RS03905;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011578.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 716786 716968 . - . ID=gene-CCO35_RS03910;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=CCO35_RS03910;old_locus_tag=CCO35_03910 NZ_NPME01000001.1 Protein Homology CDS 716786 716968 . - 0 ID=cds-WP_000350055.1;Parent=gene-CCO35_RS03910;Dbxref=GenBank:WP_000350055.1;Name=WP_000350055.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=CCO35_RS03910;product=protein YcaR;protein_id=WP_000350055.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 717020 718252 . - . ID=gene-CCO35_RS03915;Name=CCO35_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03915;old_locus_tag=CCO35_03915 NZ_NPME01000001.1 Protein Homology CDS 717020 718252 . - 0 ID=cds-WP_000056927.1;Parent=gene-CCO35_RS03915;Dbxref=GenBank:WP_000056927.1;Name=WP_000056927.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=CCO35_RS03915;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000056927.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 718296 719273 . - . ID=gene-CCO35_RS03920;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=CCO35_RS03920;old_locus_tag=CCO35_03920 NZ_NPME01000001.1 Protein Homology CDS 718296 719273 . - 0 ID=cds-WP_000561679.1;Parent=gene-CCO35_RS03920;Dbxref=GenBank:WP_000561679.1;Name=WP_000561679.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=CCO35_RS03920;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000561679.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 719270 721018 . - . ID=gene-CCO35_RS03925;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=CCO35_RS03925;old_locus_tag=CCO35_03925 NZ_NPME01000001.1 Protein Homology CDS 719270 721018 . - 0 ID=cds-WP_000551246.1;Parent=gene-CCO35_RS03925;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=CCO35_RS03925;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 721055 723319 . - . ID=gene-CCO35_RS03930;Name=CCO35_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03930;old_locus_tag=CCO35_03930 NZ_NPME01000001.1 Protein Homology CDS 721055 723319 . - 0 ID=cds-WP_031565026.1;Parent=gene-CCO35_RS03930;Dbxref=GenBank:WP_031565026.1;Name=WP_031565026.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=CCO35_RS03930;product=ComEC family protein;protein_id=WP_031565026.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 723549 723833 . - . ID=gene-CCO35_RS03935;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=CCO35_RS03935;old_locus_tag=CCO35_03935 NZ_NPME01000001.1 Protein Homology CDS 723549 723833 . - 0 ID=cds-WP_000167332.1;Parent=gene-CCO35_RS03935;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=CCO35_RS03935;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 723989 725662 . - . ID=gene-CCO35_RS03940;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CCO35_RS03940;old_locus_tag=CCO35_03940 NZ_NPME01000001.1 Protein Homology CDS 723989 725662 . - 0 ID=cds-WP_000140324.1;Parent=gene-CCO35_RS03940;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=CCO35_RS03940;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 725776 726459 . - . ID=gene-CCO35_RS03945;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CCO35_RS03945;old_locus_tag=CCO35_03945 NZ_NPME01000001.1 Protein Homology CDS 725776 726459 . - 0 ID=cds-WP_031564999.1;Parent=gene-CCO35_RS03945;Dbxref=GenBank:WP_031564999.1;Name=WP_031564999.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=CCO35_RS03945;product=(d)CMP kinase;protein_id=WP_031564999.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 726632 727393 . - . ID=gene-CCO35_RS03950;Name=CCO35_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03950;old_locus_tag=CCO35_03950 NZ_NPME01000001.1 Protein Homology CDS 726632 727393 . - 0 ID=cds-WP_000792301.1;Parent=gene-CCO35_RS03950;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=CCO35_RS03950;product=M48 family metallopeptidase;protein_id=WP_000792301.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 727537 728820 . - . ID=gene-CCO35_RS03955;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CCO35_RS03955;old_locus_tag=CCO35_03955 NZ_NPME01000001.1 Protein Homology CDS 727537 728820 . - 0 ID=cds-WP_094965316.1;Parent=gene-CCO35_RS03955;Dbxref=GenBank:WP_094965316.1;Name=WP_094965316.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=CCO35_RS03955;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_094965316.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 728891 729979 . - . ID=gene-CCO35_RS03960;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=CCO35_RS03960;old_locus_tag=CCO35_03960 NZ_NPME01000001.1 Protein Homology CDS 728891 729979 . - 0 ID=cds-WP_094965317.1;Parent=gene-CCO35_RS03960;Dbxref=GenBank:WP_094965317.1;Name=WP_094965317.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=CCO35_RS03960;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_094965317.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 730165 730857 . - . ID=gene-CCO35_RS03965;Name=CCO35_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03965;old_locus_tag=CCO35_03965 NZ_NPME01000001.1 Protein Homology CDS 730165 730857 . - 0 ID=cds-WP_000642870.1;Parent=gene-CCO35_RS03965;Dbxref=GenBank:WP_000642870.1;Name=WP_000642870.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=CCO35_RS03965;product=DUF421 domain-containing protein;protein_id=WP_000642870.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 730994 732754 . + . ID=gene-CCO35_RS03970;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=CCO35_RS03970;old_locus_tag=CCO35_03970 NZ_NPME01000001.1 Protein Homology CDS 730994 732754 . + 0 ID=cds-WP_031564992.1;Parent=gene-CCO35_RS03970;Dbxref=GenBank:WP_031564992.1;Name=WP_031564992.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=CCO35_RS03970;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_031564992.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 733159 734016 . + . ID=gene-CCO35_RS03975;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=CCO35_RS03975;old_locus_tag=CCO35_03975 NZ_NPME01000001.1 Protein Homology CDS 733159 734016 . + 0 ID=cds-WP_000642539.1;Parent=gene-CCO35_RS03975;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=CCO35_RS03975;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 734076 736358 . + . ID=gene-CCO35_RS03980;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO35_RS03980;old_locus_tag=CCO35_03980 NZ_NPME01000001.1 Protein Homology CDS 734076 736358 . + 0 ID=cds-WP_001292803.1;Parent=gene-CCO35_RS03980;Dbxref=GenBank:WP_001292803.1;Name=WP_001292803.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=CCO35_RS03980;product=formate C-acetyltransferase;protein_id=WP_001292803.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 736437 737390 . - . ID=gene-CCO35_RS03985;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=CCO35_RS03985;old_locus_tag=CCO35_03985 NZ_NPME01000001.1 Protein Homology CDS 736437 737390 . - 0 ID=cds-WP_001123024.1;Parent=gene-CCO35_RS03985;Dbxref=GenBank:WP_001123024.1;Name=WP_001123024.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001123024.1;locus_tag=CCO35_RS03985;product=type III secretion system effector SopD2;protein_id=WP_001123024.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 737522 737848 . + . ID=gene-CCO35_RS03990;Name=CCO35_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS03990;old_locus_tag=CCO35_03990 NZ_NPME01000001.1 Protein Homology CDS 737522 737848 . + 0 ID=cds-WP_077916004.1;Parent=gene-CCO35_RS03990;Dbxref=GenBank:WP_077916004.1;Name=WP_077916004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=CCO35_RS03990;product=cytoplasmic protein;protein_id=WP_077916004.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 737967 738764 . + . ID=gene-CCO35_RS03995;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CCO35_RS03995;old_locus_tag=CCO35_03995 NZ_NPME01000001.1 Protein Homology CDS 737967 738764 . + 0 ID=cds-WP_000067928.1;Parent=gene-CCO35_RS03995;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=CCO35_RS03995;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 739055 740476 . - . ID=gene-CCO35_RS04000;Name=CCO35_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04000;old_locus_tag=CCO35_04000 NZ_NPME01000001.1 Protein Homology CDS 739055 740476 . - 0 ID=cds-WP_001134264.1;Parent=gene-CCO35_RS04000;Dbxref=GenBank:WP_001134264.1;Name=WP_001134264.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=CCO35_RS04000;product=APC family permease;protein_id=WP_001134264.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 740694 741842 . - . ID=gene-CCO35_RS04005;Name=CCO35_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04005;old_locus_tag=CCO35_04005 NZ_NPME01000001.1 Protein Homology CDS 740694 741842 . - 0 ID=cds-WP_000109271.1;Parent=gene-CCO35_RS04005;Dbxref=GenBank:WP_000109271.1;Name=WP_000109271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=CCO35_RS04005;product=MFS transporter;protein_id=WP_000109271.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 742192 743055 . - . ID=gene-CCO35_RS04010;Name=CCO35_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04010;old_locus_tag=CCO35_04010 NZ_NPME01000001.1 Protein Homology CDS 742192 743055 . - 0 ID=cds-WP_065305163.1;Parent=gene-CCO35_RS04010;Dbxref=GenBank:WP_065305163.1;Name=WP_065305163.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=CCO35_RS04010;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_065305163.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 743057 743674 . - . ID=gene-CCO35_RS04015;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=CCO35_RS04015;old_locus_tag=CCO35_04015 NZ_NPME01000001.1 Protein Homology CDS 743057 743674 . - 0 ID=cds-WP_000213069.1;Parent=gene-CCO35_RS04015;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO35_RS04015;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 743685 746129 . - . ID=gene-CCO35_RS04020;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=CCO35_RS04020;old_locus_tag=CCO35_04020 NZ_NPME01000001.1 Protein Homology CDS 743685 746129 . - 0 ID=cds-WP_094965318.1;Parent=gene-CCO35_RS04020;Dbxref=GenBank:WP_094965318.1;Name=WP_094965318.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=CCO35_RS04020;product=dimethylsulfoxide reductase subunit A;protein_id=WP_094965318.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 746367 747659 . - . ID=gene-CCO35_RS04025;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CCO35_RS04025;old_locus_tag=CCO35_04025 NZ_NPME01000001.1 Protein Homology CDS 746367 747659 . - 0 ID=cds-WP_023263063.1;Parent=gene-CCO35_RS04025;Dbxref=GenBank:WP_023263063.1;Name=WP_023263063.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=CCO35_RS04025;product=serine--tRNA ligase;protein_id=WP_023263063.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 747918 749261 . - . ID=gene-CCO35_RS04030;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=CCO35_RS04030;old_locus_tag=CCO35_04030 NZ_NPME01000001.1 Protein Homology CDS 747918 749261 . - 0 ID=cds-WP_000067786.1;Parent=gene-CCO35_RS04030;Dbxref=GenBank:WP_000067786.1;Name=WP_000067786.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=CCO35_RS04030;product=replication-associated recombination protein RarA;protein_id=WP_000067786.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 749271 749882 . - . ID=gene-CCO35_RS04035;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=CCO35_RS04035;old_locus_tag=CCO35_04035 NZ_NPME01000001.1 Protein Homology CDS 749271 749882 . - 0 ID=cds-WP_001519746.1;Parent=gene-CCO35_RS04035;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=CCO35_RS04035;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001519746.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 750025 754101 . - . ID=gene-CCO35_RS04040;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=CCO35_RS04040;old_locus_tag=CCO35_04040 NZ_NPME01000001.1 Protein Homology CDS 750025 754101 . - 0 ID=cds-WP_094965329.1;Parent=gene-CCO35_RS04040;Dbxref=GenBank:WP_094965329.1;Name=WP_094965329.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=CCO35_RS04040;product=DNA translocase FtsK;protein_id=WP_094965329.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 754236 754730 . - . ID=gene-CCO35_RS04045;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=CCO35_RS04045;old_locus_tag=CCO35_04045 NZ_NPME01000001.1 Protein Homology CDS 754236 754730 . - 0 ID=cds-WP_000228469.1;Parent=gene-CCO35_RS04045;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=CCO35_RS04045;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 755277 756245 . + . ID=gene-CCO35_RS04055;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CCO35_RS04055;old_locus_tag=CCO35_04055 NZ_NPME01000001.1 Protein Homology CDS 755277 756245 . + 0 ID=cds-WP_000537406.1;Parent=gene-CCO35_RS04055;Dbxref=GenBank:WP_000537406.1;Name=WP_000537406.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=CCO35_RS04055;product=thioredoxin-disulfide reductase;protein_id=WP_000537406.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 756360 758126 . + . ID=gene-CCO35_RS04060;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=CCO35_RS04060;old_locus_tag=CCO35_04060 NZ_NPME01000001.1 Protein Homology CDS 756360 758126 . + 0 ID=cds-WP_001044531.1;Parent=gene-CCO35_RS04060;Dbxref=GenBank:WP_001044531.1;Name=WP_001044531.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=CCO35_RS04060;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044531.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 758127 759848 . + . ID=gene-CCO35_RS04065;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=CCO35_RS04065;old_locus_tag=CCO35_04065 NZ_NPME01000001.1 Protein Homology CDS 758127 759848 . + 0 ID=cds-WP_001202249.1;Parent=gene-CCO35_RS04065;Dbxref=GenBank:WP_001202249.1;Name=WP_001202249.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=CCO35_RS04065;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202249.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 759893 760597 . + . ID=gene-CCO35_RS04070;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=CCO35_RS04070;old_locus_tag=CCO35_04070 NZ_NPME01000001.1 Protein Homology CDS 759893 760597 . + 0 ID=cds-WP_001241640.1;Parent=gene-CCO35_RS04070;Dbxref=GenBank:WP_001241640.1;Name=WP_001241640.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=CCO35_RS04070;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241640.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 760909 761127 . + . ID=gene-CCO35_RS04080;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CCO35_RS04080;old_locus_tag=CCO35_04080 NZ_NPME01000001.1 Protein Homology CDS 760909 761127 . + 0 ID=cds-WP_001040187.1;Parent=gene-CCO35_RS04080;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=CCO35_RS04080;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 761218 762129 . - . ID=gene-CCO35_RS04085;Name=CCO35_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04085;old_locus_tag=CCO35_04085 NZ_NPME01000001.1 Protein Homology CDS 761218 762129 . - 0 ID=cds-WP_000597928.1;Parent=gene-CCO35_RS04085;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=CCO35_RS04085;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 762238 763098 . + . ID=gene-CCO35_RS04090;Name=CCO35_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04090;old_locus_tag=CCO35_04090 NZ_NPME01000001.1 Protein Homology CDS 762238 763098 . + 0 ID=cds-WP_000809969.1;Parent=gene-CCO35_RS04090;Dbxref=GenBank:WP_000809969.1;Name=WP_000809969.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=CCO35_RS04090;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 763118 763795 . + . ID=gene-CCO35_RS04095;Name=CCO35_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04095;old_locus_tag=CCO35_04095 NZ_NPME01000001.1 Protein Homology CDS 763118 763795 . + 0 ID=cds-WP_000097893.1;Parent=gene-CCO35_RS04095;Dbxref=GenBank:WP_000097893.1;Name=WP_000097893.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=CCO35_RS04095;product=hydrolase;protein_id=WP_000097893.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 763944 764031 . + . ID=gene-CCO35_RS04100;Name=CCO35_RS04100;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS04100;old_locus_tag=CCO35_04100 NZ_NPME01000001.1 tRNAscan-SE tRNA 763944 764031 . + . ID=rna-CCO35_RS04100;Parent=gene-CCO35_RS04100;anticodon=(pos:763978..763980);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04100;product=tRNA-Ser NZ_NPME01000001.1 tRNAscan-SE exon 763944 764031 . + . ID=exon-CCO35_RS04100-1;Parent=rna-CCO35_RS04100;anticodon=(pos:763978..763980);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04100;product=tRNA-Ser NZ_NPME01000001.1 RefSeq gene 764403 766679 . - . ID=gene-CCO35_RS04110;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=CCO35_RS04110;old_locus_tag=CCO35_04110 NZ_NPME01000001.1 Protein Homology CDS 764403 766679 . - 0 ID=cds-WP_000934064.1;Parent=gene-CCO35_RS04110;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=CCO35_RS04110;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 766710 767030 . - . ID=gene-CCO35_RS04115;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=CCO35_RS04115;old_locus_tag=CCO35_04115 NZ_NPME01000001.1 Protein Homology CDS 766710 767030 . - 0 ID=cds-WP_000520789.1;Parent=gene-CCO35_RS04115;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=CCO35_RS04115;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 767126 767203 . - . ID=gene-CCO35_RS23945;Name=CCO35_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23945 NZ_NPME01000001.1 Protein Homology CDS 767126 767203 . - 0 ID=cds-WP_212742690.1;Parent=gene-CCO35_RS23945;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=CCO35_RS23945;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 767354 767575 . + . ID=gene-CCO35_RS04120;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=CCO35_RS04120;old_locus_tag=CCO35_04120 NZ_NPME01000001.1 Protein Homology CDS 767354 767575 . + 0 ID=cds-WP_000447499.1;Parent=gene-CCO35_RS04120;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=CCO35_RS04120;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 767705 769651 . - . ID=gene-CCO35_RS04125;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=CCO35_RS04125;old_locus_tag=CCO35_04125 NZ_NPME01000001.1 Protein Homology CDS 767705 769651 . - 0 ID=cds-WP_000125891.1;Parent=gene-CCO35_RS04125;Dbxref=GenBank:WP_000125891.1;Name=WP_000125891.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=CCO35_RS04125;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000125891.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 769648 770766 . - . ID=gene-CCO35_RS04130;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=CCO35_RS04130;old_locus_tag=CCO35_04130 NZ_NPME01000001.1 Protein Homology CDS 769648 770766 . - 0 ID=cds-WP_001201743.1;Parent=gene-CCO35_RS04130;Dbxref=GenBank:WP_001201743.1;Name=WP_001201743.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=CCO35_RS04130;product=macrolide transporter subunit MacA;protein_id=WP_001201743.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 770912 771862 . + . ID=gene-CCO35_RS04135;Name=CCO35_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04135;old_locus_tag=CCO35_04135 NZ_NPME01000001.1 Protein Homology CDS 770912 771862 . + 0 ID=cds-WP_001528818.1;Parent=gene-CCO35_RS04135;Dbxref=GenBank:WP_001528818.1;Name=WP_001528818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=CCO35_RS04135;product=VirK/YbjX family protein;protein_id=WP_001528818.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 771859 773517 . - . ID=gene-CCO35_RS04140;Name=CCO35_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04140;old_locus_tag=CCO35_04140 NZ_NPME01000001.1 Protein Homology CDS 771859 773517 . - 0 ID=cds-WP_000599770.1;Parent=gene-CCO35_RS04140;Dbxref=GenBank:WP_000599770.1;Name=WP_000599770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=CCO35_RS04140;product=ATP-dependent endonuclease;protein_id=WP_000599770.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 773718 774617 . + . ID=gene-CCO35_RS04150;Name=CCO35_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04150;old_locus_tag=CCO35_04150 NZ_NPME01000001.1 Protein Homology CDS 773718 774617 . + 0 ID=cds-WP_000491118.1;Parent=gene-CCO35_RS04150;Dbxref=GenBank:WP_000491118.1;Name=WP_000491118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=CCO35_RS04150;product=lysine exporter LysO family protein;protein_id=WP_000491118.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 774761 776413 . + . ID=gene-CCO35_RS04155;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=CCO35_RS04155;old_locus_tag=CCO35_04155 NZ_NPME01000001.1 Protein Homology CDS 774761 776413 . + 0 ID=cds-WP_000458785.1;Parent=gene-CCO35_RS04155;Dbxref=GenBank:WP_000458785.1;Name=WP_000458785.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=CCO35_RS04155;product=hydroxylamine reductase;protein_id=WP_000458785.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 776425 777393 . + . ID=gene-CCO35_RS04160;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=CCO35_RS04160;old_locus_tag=CCO35_04160 NZ_NPME01000001.1 Protein Homology CDS 776425 777393 . + 0 ID=cds-WP_024151567.1;Parent=gene-CCO35_RS04160;Dbxref=GenBank:WP_024151567.1;Name=WP_024151567.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=CCO35_RS04160;product=NADH oxidoreductase;protein_id=WP_024151567.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 777551 779269 . + . ID=gene-CCO35_RS04165;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=CCO35_RS04165;old_locus_tag=CCO35_04165 NZ_NPME01000001.1 Protein Homology CDS 777551 779269 . + 0 ID=cds-WP_000815321.1;Parent=gene-CCO35_RS04165;Dbxref=GenBank:WP_000815321.1;Name=WP_000815321.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=CCO35_RS04165;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815321.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 779308 780309 . + . ID=gene-CCO35_RS04170;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=CCO35_RS04170;old_locus_tag=CCO35_04170 NZ_NPME01000001.1 Protein Homology CDS 779308 780309 . + 0 ID=cds-WP_031569921.1;Parent=gene-CCO35_RS04170;Dbxref=GenBank:WP_031569921.1;Name=WP_031569921.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=CCO35_RS04170;product=low-specificity L-threonine aldolase;protein_id=WP_031569921.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 780320 781753 . + . ID=gene-CCO35_RS04175;Name=CCO35_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04175;old_locus_tag=CCO35_04175 NZ_NPME01000001.1 Protein Homology CDS 780320 781753 . + 0 ID=cds-WP_031569925.1;Parent=gene-CCO35_RS04175;Dbxref=GenBank:WP_031569925.1;Name=WP_031569925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=CCO35_RS04175;product=SDR family oxidoreductase;protein_id=WP_031569925.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 781849 782862 . + . ID=gene-CCO35_RS04180;Name=CCO35_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04180;old_locus_tag=CCO35_04180 NZ_NPME01000001.1 Protein Homology CDS 781849 782862 . + 0 ID=cds-WP_000866907.1;Parent=gene-CCO35_RS04180;Dbxref=GenBank:WP_000866907.1;Name=WP_000866907.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=CCO35_RS04180;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_000866907.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 782859 783689 . - . ID=gene-CCO35_RS04185;Name=CCO35_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04185;old_locus_tag=CCO35_04185 NZ_NPME01000001.1 Protein Homology CDS 782859 783689 . - 0 ID=cds-WP_023203679.1;Parent=gene-CCO35_RS04185;Dbxref=GenBank:WP_023203679.1;Name=WP_023203679.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=CCO35_RS04185;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_023203679.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 783686 784009 . - . ID=gene-CCO35_RS04190;Name=CCO35_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04190;old_locus_tag=CCO35_04190 NZ_NPME01000001.1 Protein Homology CDS 783686 784009 . - 0 ID=cds-WP_001160725.1;Parent=gene-CCO35_RS04190;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO35_RS04190;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 784137 784652 . + . ID=gene-CCO35_RS04195;Name=CCO35_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04195;old_locus_tag=CCO35_04195 NZ_NPME01000001.1 Protein Homology CDS 784137 784652 . + 0 ID=cds-WP_001270724.1;Parent=gene-CCO35_RS04195;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=CCO35_RS04195;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 784881 785609 . + . ID=gene-CCO35_RS04200;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=CCO35_RS04200;old_locus_tag=CCO35_04200 NZ_NPME01000001.1 Protein Homology CDS 784881 785609 . + 0 ID=cds-WP_000027186.1;Parent=gene-CCO35_RS04200;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=CCO35_RS04200;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 785627 786358 . + . ID=gene-CCO35_RS04205;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=CCO35_RS04205;old_locus_tag=CCO35_04205 NZ_NPME01000001.1 Protein Homology CDS 785627 786358 . + 0 ID=cds-WP_000756586.1;Parent=gene-CCO35_RS04205;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=CCO35_RS04205;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 786365 787081 . + . ID=gene-CCO35_RS04210;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=CCO35_RS04210;old_locus_tag=CCO35_04210 NZ_NPME01000001.1 Protein Homology CDS 786365 787081 . + 0 ID=cds-WP_001001677.1;Parent=gene-CCO35_RS04210;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=CCO35_RS04210;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 787081 787749 . + . ID=gene-CCO35_RS04215;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=CCO35_RS04215;old_locus_tag=CCO35_04215 NZ_NPME01000001.1 Protein Homology CDS 787081 787749 . + 0 ID=cds-WP_000895393.1;Parent=gene-CCO35_RS04215;Dbxref=GenBank:WP_000895393.1;Name=WP_000895393.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=CCO35_RS04215;product=arginine ABC transporter permease ArtM;protein_id=WP_000895393.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 787986 788717 . + . ID=gene-CCO35_RS04220;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=CCO35_RS04220;old_locus_tag=CCO35_04220 NZ_NPME01000001.1 Protein Homology CDS 787986 788717 . + 0 ID=cds-WP_000737537.1;Parent=gene-CCO35_RS04220;Dbxref=GenBank:WP_000737537.1;Name=WP_000737537.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=CCO35_RS04220;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737537.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 788924 790411 . - . ID=gene-CCO35_RS04230;Name=CCO35_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04230;old_locus_tag=CCO35_04230 NZ_NPME01000001.1 Protein Homology CDS 788924 790411 . - 0 ID=cds-WP_023197601.1;Parent=gene-CCO35_RS04230;Dbxref=GenBank:WP_023197601.1;Name=WP_023197601.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=CCO35_RS04230;product=sulfatase;protein_id=WP_023197601.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 790421 790741 . - . ID=gene-CCO35_RS04235;Name=CCO35_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04235;old_locus_tag=CCO35_04235 NZ_NPME01000001.1 Protein Homology CDS 790421 790741 . - 0 ID=cds-WP_000655399.1;Parent=gene-CCO35_RS04235;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=CCO35_RS04235;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 790771 792114 . - . ID=gene-CCO35_RS04240;Name=CCO35_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04240;old_locus_tag=CCO35_04240 NZ_NPME01000001.1 Protein Homology CDS 790771 792114 . - 0 ID=cds-WP_000399318.1;Parent=gene-CCO35_RS04240;Dbxref=GenBank:WP_000399318.1;Name=WP_000399318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=CCO35_RS04240;product=PTS sugar transporter subunit IIC;protein_id=WP_000399318.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 792409 793536 . - . ID=gene-CCO35_RS04245;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=CCO35_RS04245;old_locus_tag=CCO35_04245 NZ_NPME01000001.1 Protein Homology CDS 792409 793536 . - 0 ID=cds-WP_001149800.1;Parent=gene-CCO35_RS04245;Dbxref=GenBank:WP_001149800.1;Name=WP_001149800.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=CCO35_RS04245;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149800.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 793579 794052 . - . ID=gene-CCO35_RS04250;Name=CCO35_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04250;old_locus_tag=CCO35_04250 NZ_NPME01000001.1 Protein Homology CDS 793579 794052 . - 0 ID=cds-WP_000505788.1;Parent=gene-CCO35_RS04250;Dbxref=GenBank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=CCO35_RS04250;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 794126 794971 . - . ID=gene-CCO35_RS04255;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=CCO35_RS04255;old_locus_tag=CCO35_04255 NZ_NPME01000001.1 Protein Homology CDS 794126 794971 . - 0 ID=cds-WP_001061621.1;Parent=gene-CCO35_RS04255;Dbxref=GenBank:WP_001061621.1;Name=WP_001061621.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=CCO35_RS04255;product=putrescine ABC transporter permease PotI;protein_id=WP_001061621.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 794968 795921 . - . ID=gene-CCO35_RS04260;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=CCO35_RS04260;old_locus_tag=CCO35_04260 NZ_NPME01000001.1 Protein Homology CDS 794968 795921 . - 0 ID=cds-WP_000105453.1;Parent=gene-CCO35_RS04260;Dbxref=GenBank:WP_000105453.1;Name=WP_000105453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=CCO35_RS04260;product=putrescine ABC transporter permease PotH;protein_id=WP_000105453.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 795931 797064 . - . ID=gene-CCO35_RS04265;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=CCO35_RS04265;old_locus_tag=CCO35_04265 NZ_NPME01000001.1 Protein Homology CDS 795931 797064 . - 0 ID=cds-WP_001000690.1;Parent=gene-CCO35_RS04265;Dbxref=GenBank:WP_001000690.1;Name=WP_001000690.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=CCO35_RS04265;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000690.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 797152 798264 . - . ID=gene-CCO35_RS04270;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=CCO35_RS04270;old_locus_tag=CCO35_04270 NZ_NPME01000001.1 Protein Homology CDS 797152 798264 . - 0 ID=cds-WP_000125769.1;Parent=gene-CCO35_RS04270;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=CCO35_RS04270;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 798613 799089 . - . ID=gene-CCO35_RS04275;Name=CCO35_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04275;old_locus_tag=CCO35_04275 NZ_NPME01000001.1 Protein Homology CDS 798613 799089 . - 0 ID=cds-WP_000624810.1;Parent=gene-CCO35_RS04275;Dbxref=GenBank:WP_000624810.1;Name=WP_000624810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=CCO35_RS04275;product=YbjN domain-containing protein;protein_id=WP_000624810.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 799185 800087 . - . ID=gene-CCO35_RS04280;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=CCO35_RS04280;old_locus_tag=CCO35_04280 NZ_NPME01000001.1 Protein Homology CDS 799185 800087 . - 0 ID=cds-WP_000684366.1;Parent=gene-CCO35_RS04280;Dbxref=GenBank:WP_000684366.1;Name=WP_000684366.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=CCO35_RS04280;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684366.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 800145 800867 . - . ID=gene-CCO35_RS04285;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CCO35_RS04285;old_locus_tag=CCO35_04285 NZ_NPME01000001.1 Protein Homology CDS 800145 800867 . - 0 ID=cds-WP_000075300.1;Parent=gene-CCO35_RS04285;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=CCO35_RS04285;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 800851 801141 . - . ID=gene-CCO35_RS04290;Name=CCO35_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04290;old_locus_tag=CCO35_04290 NZ_NPME01000001.1 Protein Homology CDS 800851 801141 . - 0 ID=cds-WP_001259131.1;Parent=gene-CCO35_RS04290;Dbxref=GenBank:WP_001259131.1;Name=WP_001259131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=CCO35_RS04290;product=YbjC family protein;protein_id=WP_001259131.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 801311 801574 . + . ID=gene-CCO35_RS04295;Name=CCO35_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04295;old_locus_tag=CCO35_04295 NZ_NPME01000001.1 Protein Homology CDS 801311 801574 . + 0 ID=cds-WP_000495513.1;Parent=gene-CCO35_RS04295;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=CCO35_RS04295;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 801606 801983 . - . ID=gene-CCO35_RS04300;Name=CCO35_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04300;old_locus_tag=CCO35_04300 NZ_NPME01000001.1 Protein Homology CDS 801606 801983 . - 0 ID=cds-WP_000680850.1;Parent=gene-CCO35_RS04300;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=CCO35_RS04300;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 802254 803939 . + . ID=gene-CCO35_RS04305;Name=CCO35_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04305;old_locus_tag=CCO35_04305 NZ_NPME01000001.1 Protein Homology CDS 802254 803939 . + 0 ID=cds-WP_001024853.1;Parent=gene-CCO35_RS04305;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=CCO35_RS04305;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 804056 804676 . - . ID=gene-CCO35_RS04315;Name=CCO35_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04315;old_locus_tag=CCO35_04310 NZ_NPME01000001.1 Protein Homology CDS 804056 804676 . - 0 ID=cds-WP_000661867.1;Parent=gene-CCO35_RS04315;Dbxref=GenBank:WP_000661867.1;Name=WP_000661867.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=CCO35_RS04315;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661867.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 804844 806055 . + . ID=gene-CCO35_RS04320;Name=CCO35_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04320;old_locus_tag=CCO35_04315 NZ_NPME01000001.1 Protein Homology CDS 804844 806055 . + 0 ID=cds-WP_000217430.1;Parent=gene-CCO35_RS04320;Dbxref=GenBank:WP_000217430.1;Name=WP_000217430.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=CCO35_RS04320;product=MFS transporter;protein_id=WP_000217430.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 806052 806867 . + . ID=gene-CCO35_RS04325;Name=CCO35_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04325;old_locus_tag=CCO35_04320 NZ_NPME01000001.1 Protein Homology CDS 806052 806867 . + 0 ID=cds-WP_000023540.1;Parent=gene-CCO35_RS04325;Dbxref=GenBank:WP_000023540.1;Name=WP_000023540.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=CCO35_RS04325;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000023540.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 806921 808153 . - . ID=gene-CCO35_RS04330;Name=CCO35_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04330;old_locus_tag=CCO35_04325 NZ_NPME01000001.1 Protein Homology CDS 806921 808153 . - 0 ID=cds-WP_001181285.1;Parent=gene-CCO35_RS04330;Dbxref=GenBank:WP_001181285.1;Name=WP_001181285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=CCO35_RS04330;product=MFS transporter;protein_id=WP_001181285.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 808466 809074 . + . ID=gene-CCO35_RS04335;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=CCO35_RS04335;old_locus_tag=CCO35_04330 NZ_NPME01000001.1 Protein Homology CDS 808466 809074 . + 0 ID=cds-WP_001528832.1;Parent=gene-CCO35_RS04335;Dbxref=GenBank:WP_001528832.1;Name=WP_001528832.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=CCO35_RS04335;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001528832.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 809146 809904 . + . ID=gene-CCO35_RS04340;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=CCO35_RS04340;old_locus_tag=CCO35_04335 NZ_NPME01000001.1 Protein Homology CDS 809146 809904 . + 0 ID=cds-WP_000450106.1;Parent=gene-CCO35_RS04340;Dbxref=GenBank:WP_000450106.1;Name=WP_000450106.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=CCO35_RS04340;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450106.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 809949 811151 . - . ID=gene-CCO35_RS04345;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=CCO35_RS04345;old_locus_tag=CCO35_04340 NZ_NPME01000001.1 Protein Homology CDS 809949 811151 . - 0 ID=cds-WP_000195715.1;Parent=gene-CCO35_RS04345;Dbxref=GenBank:WP_000195715.1;Name=WP_000195715.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=CCO35_RS04345;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195715.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 811395 812021 . + . ID=gene-CCO35_RS04350;Name=CCO35_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04350;old_locus_tag=CCO35_04345 NZ_NPME01000001.1 Protein Homology CDS 811395 812021 . + 0 ID=cds-WP_000631910.1;Parent=gene-CCO35_RS04350;Dbxref=GenBank:WP_000631910.1;Name=WP_000631910.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=CCO35_RS04350;product=glutathione S-transferase family protein;protein_id=WP_000631910.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 812018 812545 . - . ID=gene-CCO35_RS04355;Name=CCO35_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04355;old_locus_tag=CCO35_04350 NZ_NPME01000001.1 Protein Homology CDS 812018 812545 . - 0 ID=cds-WP_369700138.1;Parent=gene-CCO35_RS04355;Dbxref=GenBank:WP_369700138.1;Name=WP_369700138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=CCO35_RS04355;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_369700138.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 812606 812701 . - . ID=gene-CCO35_RS24270;Name=CCO35_RS24270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24270;partial=true;pseudo=true;start_range=.,812606 NZ_NPME01000001.1 Protein Homology CDS 812606 812701 . - 0 ID=cds-CCO35_RS24270;Parent=gene-CCO35_RS24270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF015750.6;locus_tag=CCO35_RS24270;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,812606;transl_table=11 NZ_NPME01000001.1 RefSeq gene 813045 813470 . + . ID=gene-CCO35_RS04360;Name=CCO35_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04360;old_locus_tag=CCO35_04355 NZ_NPME01000001.1 Protein Homology CDS 813045 813470 . + 0 ID=cds-WP_000287110.1;Parent=gene-CCO35_RS04360;Dbxref=GenBank:WP_000287110.1;Name=WP_000287110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=CCO35_RS04360;product=GntP family permease;protein_id=WP_000287110.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 813735 814625 . + . ID=gene-CCO35_RS04365;Name=CCO35_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04365;old_locus_tag=CCO35_04360 NZ_NPME01000001.1 Protein Homology CDS 813735 814625 . + 0 ID=cds-WP_000545335.1;Parent=gene-CCO35_RS04365;Dbxref=GenBank:WP_000545335.1;Name=WP_000545335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=CCO35_RS04365;product=LysR family transcriptional regulator;protein_id=WP_000545335.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 814631 816316 . - . ID=gene-CCO35_RS04370;Name=CCO35_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04370;old_locus_tag=CCO35_04365 NZ_NPME01000001.1 Protein Homology CDS 814631 816316 . - 0 ID=cds-WP_001000306.1;Parent=gene-CCO35_RS04370;Dbxref=GenBank:WP_001000306.1;Name=WP_001000306.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=CCO35_RS04370;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_001000306.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 816765 817928 . - . ID=gene-CCO35_RS04375;Name=CCO35_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04375;old_locus_tag=CCO35_04370 NZ_NPME01000001.1 Protein Homology CDS 816765 817928 . - 0 ID=cds-WP_000835387.1;Parent=gene-CCO35_RS04375;Dbxref=GenBank:WP_000835387.1;Name=WP_000835387.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=CCO35_RS04375;product=acyl-CoA dehydrogenase family protein;protein_id=WP_000835387.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 817925 818188 . - . ID=gene-CCO35_RS04380;Name=CCO35_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04380;old_locus_tag=CCO35_04375 NZ_NPME01000001.1 GeneMarkS-2+ CDS 817925 818188 . - 0 ID=cds-WP_001528824.1;Parent=gene-CCO35_RS04380;Dbxref=GenBank:WP_001528824.1;Name=WP_001528824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS04380;product=hypothetical protein;protein_id=WP_001528824.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 818221 819174 . - . ID=gene-CCO35_RS04385;Name=CCO35_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04385;old_locus_tag=CCO35_04380 NZ_NPME01000001.1 Protein Homology CDS 818221 819174 . - 0 ID=cds-WP_000157772.1;Parent=gene-CCO35_RS04385;Dbxref=GenBank:WP_000157772.1;Name=WP_000157772.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=CCO35_RS04385;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_000157772.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 819185 819934 . - . ID=gene-CCO35_RS04390;Name=CCO35_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04390;old_locus_tag=CCO35_04385 NZ_NPME01000001.1 Protein Homology CDS 819185 819934 . - 0 ID=cds-WP_001523061.1;Parent=gene-CCO35_RS04390;Dbxref=GenBank:WP_001523061.1;Name=WP_001523061.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003461132.1;locus_tag=CCO35_RS04390;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001523061.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 819957 820472 . - . ID=gene-CCO35_RS04395;Name=CCO35_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04395;old_locus_tag=CCO35_04390 NZ_NPME01000001.1 Protein Homology CDS 819957 820472 . - 0 ID=cds-WP_023137170.1;Parent=gene-CCO35_RS04395;Dbxref=GenBank:WP_023137170.1;Name=WP_023137170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=CCO35_RS04395;product=STM0854 family CoA ester lyase;protein_id=WP_023137170.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 820798 821083 . - . ID=gene-CCO35_RS23950;Name=CCO35_RS23950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23950;old_locus_tag=CCO35_04395;partial=true;pseudo=true;start_range=.,820798 NZ_NPME01000001.1 Protein Homology CDS 820798 821083 . - 0 ID=cds-CCO35_RS23950;Parent=gene-CCO35_RS23950;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=CCO35_RS23950;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,820798;transl_table=11 NZ_NPME01000001.1 RefSeq gene 821186 821569 . - . ID=gene-CCO35_RS04405;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=CCO35_RS04405;old_locus_tag=CCO35_04400 NZ_NPME01000001.1 Protein Homology CDS 821186 821569 . - 0 ID=cds-WP_000259651.1;Parent=gene-CCO35_RS04405;Dbxref=GenBank:WP_000259651.1;Name=WP_000259651.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=CCO35_RS04405;product=biofilm formation regulator BssR;protein_id=WP_000259651.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 821800 823125 . + . ID=gene-CCO35_RS04410;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=CCO35_RS04410;old_locus_tag=CCO35_04405 NZ_NPME01000001.1 Protein Homology CDS 821800 823125 . + 0 ID=cds-WP_000073314.1;Parent=gene-CCO35_RS04410;Dbxref=GenBank:WP_000073314.1;Name=WP_000073314.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=CCO35_RS04410;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073314.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 823216 824127 . - . ID=gene-CCO35_RS04415;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=CCO35_RS04415;old_locus_tag=CCO35_04410 NZ_NPME01000001.1 Protein Homology CDS 823216 824127 . - 0 ID=cds-WP_001236024.1;Parent=gene-CCO35_RS04415;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=CCO35_RS04415;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 824130 825050 . - . ID=gene-CCO35_RS04420;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=CCO35_RS04420;old_locus_tag=CCO35_04415 NZ_NPME01000001.1 Protein Homology CDS 824130 825050 . - 0 ID=cds-WP_000936066.1;Parent=gene-CCO35_RS04420;Dbxref=GenBank:WP_000936066.1;Name=WP_000936066.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=CCO35_RS04420;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936066.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 825111 826649 . - . ID=gene-CCO35_RS04425;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=CCO35_RS04425;old_locus_tag=CCO35_04420 NZ_NPME01000001.1 Protein Homology CDS 825111 826649 . - 0 ID=cds-WP_000191439.1;Parent=gene-CCO35_RS04425;Dbxref=GenBank:WP_000191439.1;Name=WP_000191439.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=CCO35_RS04425;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191439.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 826682 828553 . - . ID=gene-CCO35_RS04430;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=CCO35_RS04430;old_locus_tag=CCO35_04425 NZ_NPME01000001.1 Protein Homology CDS 826682 828553 . - 0 ID=cds-WP_001120575.1;Parent=gene-CCO35_RS04430;Dbxref=GenBank:WP_001120575.1;Name=WP_001120575.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=CCO35_RS04430;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001120575.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 828564 829505 . - . ID=gene-CCO35_RS04435;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=CCO35_RS04435;old_locus_tag=CCO35_04430 NZ_NPME01000001.1 Protein Homology CDS 828564 829505 . - 0 ID=cds-WP_001030503.1;Parent=gene-CCO35_RS04435;Dbxref=GenBank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=CCO35_RS04435;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 829709 830944 . + . ID=gene-CCO35_RS04440;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=CCO35_RS04440;old_locus_tag=CCO35_04435 NZ_NPME01000001.1 Protein Homology CDS 829709 830944 . + 0 ID=cds-WP_000395792.1;Parent=gene-CCO35_RS04440;Dbxref=GenBank:WP_000395792.1;Name=WP_000395792.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=CCO35_RS04440;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000395792.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 830944 831693 . + . ID=gene-CCO35_RS04445;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=CCO35_RS04445;old_locus_tag=CCO35_04440 NZ_NPME01000001.1 Protein Homology CDS 830944 831693 . + 0 ID=cds-WP_000829283.1;Parent=gene-CCO35_RS04445;Dbxref=GenBank:WP_000829283.1;Name=WP_000829283.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=CCO35_RS04445;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829283.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 831971 832870 . + . ID=gene-CCO35_RS04450;Name=CCO35_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04450;old_locus_tag=CCO35_04445 NZ_NPME01000001.1 Protein Homology CDS 831971 832870 . + 0 ID=cds-WP_000576947.1;Parent=gene-CCO35_RS04450;Dbxref=GenBank:WP_000576947.1;Name=WP_000576947.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=CCO35_RS04450;product=glycyl-radical enzyme activating protein;protein_id=WP_000576947.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 832876 835308 . + . ID=gene-CCO35_RS04455;Name=CCO35_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04455;old_locus_tag=CCO35_04450 NZ_NPME01000001.1 Protein Homology CDS 832876 835308 . + 0 ID=cds-WP_023137169.1;Parent=gene-CCO35_RS04455;Dbxref=GenBank:WP_023137169.1;Name=WP_023137169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=CCO35_RS04455;product=glycyl radical protein;protein_id=WP_023137169.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 835386 836195 . - . ID=gene-CCO35_RS04460;Name=CCO35_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04460;old_locus_tag=CCO35_04455 NZ_NPME01000001.1 Protein Homology CDS 835386 836195 . - 0 ID=cds-WP_000217910.1;Parent=gene-CCO35_RS04460;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=CCO35_RS04460;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 836457 837722 . + . ID=gene-CCO35_RS04465;Name=CCO35_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04465;old_locus_tag=CCO35_04460 NZ_NPME01000001.1 Protein Homology CDS 836457 837722 . + 0 ID=cds-WP_000210949.1;Parent=gene-CCO35_RS04465;Dbxref=GenBank:WP_000210949.1;Name=WP_000210949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=CCO35_RS04465;product=DUF1479 domain-containing protein;protein_id=WP_000210949.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 837844 839439 . - . ID=gene-CCO35_RS04470;Name=CCO35_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04470;old_locus_tag=CCO35_04465 NZ_NPME01000001.1 Protein Homology CDS 837844 839439 . - 0 ID=cds-WP_000961434.1;Parent=gene-CCO35_RS04470;Dbxref=GenBank:WP_000961434.1;Name=WP_000961434.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=CCO35_RS04470;product=ABC-F family ATPase;protein_id=WP_000961434.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 839658 840578 . + . ID=gene-CCO35_RS04475;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=CCO35_RS04475;old_locus_tag=CCO35_04470 NZ_NPME01000001.1 Protein Homology CDS 839658 840578 . + 0 ID=cds-WP_001056401.1;Parent=gene-CCO35_RS04475;Dbxref=GenBank:WP_001056401.1;Name=WP_001056401.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=CCO35_RS04475;product=L%2CD-transpeptidase;protein_id=WP_001056401.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 840622 841734 . - . ID=gene-CCO35_RS04480;Name=CCO35_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04480;old_locus_tag=CCO35_04475 NZ_NPME01000001.1 Protein Homology CDS 840622 841734 . - 0 ID=cds-WP_001046525.1;Parent=gene-CCO35_RS04480;Dbxref=GenBank:WP_001046525.1;Name=WP_001046525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=CCO35_RS04480;product=anion transporter;protein_id=WP_001046525.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 841731 842204 . - . ID=gene-CCO35_RS04485;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=CCO35_RS04485;old_locus_tag=CCO35_04480 NZ_NPME01000001.1 Protein Homology CDS 841731 842204 . - 0 ID=cds-WP_000533542.1;Parent=gene-CCO35_RS04485;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=CCO35_RS04485;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 842390 842518 . + . ID=gene-CCO35_RS04490;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=CCO35_RS04490;old_locus_tag=CCO35_04485 NZ_NPME01000001.1 Protein Homology CDS 842390 842518 . + 0 ID=cds-WP_001001755.1;Parent=gene-CCO35_RS04490;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=CCO35_RS04490;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 842783 844363 . + . ID=gene-CCO35_RS04495;Name=CCO35_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04495;old_locus_tag=CCO35_04490 NZ_NPME01000001.1 Protein Homology CDS 842783 844363 . + 0 ID=cds-WP_023137168.1;Parent=gene-CCO35_RS04495;Dbxref=GenBank:WP_023137168.1;Name=WP_023137168.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=CCO35_RS04495;product=phosphoethanolamine transferase;protein_id=WP_023137168.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 844426 844941 . - . ID=gene-CCO35_RS04500;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=CCO35_RS04500;old_locus_tag=CCO35_04495 NZ_NPME01000001.1 Protein Homology CDS 844426 844941 . - 0 ID=cds-WP_000716763.1;Parent=gene-CCO35_RS04500;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=CCO35_RS04500;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 845295 846182 . + . ID=gene-CCO35_RS04505;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=CCO35_RS04505;old_locus_tag=CCO35_04500 NZ_NPME01000001.1 Protein Homology CDS 845295 846182 . + 0 ID=cds-WP_001119555.1;Parent=gene-CCO35_RS04505;Dbxref=GenBank:WP_001119555.1;Name=WP_001119555.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=CCO35_RS04505;product=threonine/homoserine exporter RhtA;protein_id=WP_001119555.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 846485 846988 . + . ID=gene-CCO35_RS04510;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=CCO35_RS04510;old_locus_tag=CCO35_04505 NZ_NPME01000001.1 Protein Homology CDS 846485 846988 . + 0 ID=cds-WP_000100805.1;Parent=gene-CCO35_RS04510;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=CCO35_RS04510;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 847465 848211 . + . ID=gene-CCO35_RS04515;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=CCO35_RS04515;old_locus_tag=CCO35_04510 NZ_NPME01000001.1 Protein Homology CDS 847465 848211 . + 0 ID=cds-WP_000838671.1;Parent=gene-CCO35_RS04515;Dbxref=GenBank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=CCO35_RS04515;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 848357 849016 . + . ID=gene-CCO35_RS04520;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=CCO35_RS04520;old_locus_tag=CCO35_04515 NZ_NPME01000001.1 Protein Homology CDS 848357 849016 . + 0 ID=cds-WP_001159076.1;Parent=gene-CCO35_RS04520;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=CCO35_RS04520;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 849013 849735 . + . ID=gene-CCO35_RS04525;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=CCO35_RS04525;old_locus_tag=CCO35_04520 NZ_NPME01000001.1 Protein Homology CDS 849013 849735 . + 0 ID=cds-WP_023137167.1;Parent=gene-CCO35_RS04525;Dbxref=GenBank:WP_023137167.1;Name=WP_023137167.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=CCO35_RS04525;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_023137167.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 849854 852076 . + . ID=gene-CCO35_RS04530;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=CCO35_RS04530;old_locus_tag=CCO35_04525 NZ_NPME01000001.1 Protein Homology CDS 849854 852076 . + 0 ID=cds-WP_023137166.1;Parent=gene-CCO35_RS04530;Dbxref=GenBank:WP_023137166.1;Name=WP_023137166.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=CCO35_RS04530;product=mechanosensitive channel protein;protein_id=WP_023137166.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 852073 852999 . - . ID=gene-CCO35_RS04535;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=CCO35_RS04535;old_locus_tag=CCO35_04530 NZ_NPME01000001.1 Protein Homology CDS 852073 852999 . - 0 ID=cds-WP_001275964.1;Parent=gene-CCO35_RS04535;Dbxref=GenBank:WP_001275964.1;Name=WP_001275964.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=CCO35_RS04535;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275964.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 853204 853470 . + . ID=gene-CCO35_RS04540;Name=CCO35_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04540;old_locus_tag=CCO35_04535 NZ_NPME01000001.1 Protein Homology CDS 853204 853470 . + 0 ID=cds-WP_000146332.1;Parent=gene-CCO35_RS04540;Dbxref=GenBank:WP_000146332.1;Name=WP_000146332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=CCO35_RS04540;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146332.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 853755 854015 . + . ID=gene-CCO35_RS04545;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=CCO35_RS04545;old_locus_tag=CCO35_04540 NZ_NPME01000001.1 Protein Homology CDS 853755 854015 . + 0 ID=cds-WP_000849089.1;Parent=gene-CCO35_RS04545;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=CCO35_RS04545;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 854173 855147 . - . ID=gene-CCO35_RS04550;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=CCO35_RS04550;old_locus_tag=CCO35_04545 NZ_NPME01000001.1 Protein Homology CDS 854173 855147 . - 0 ID=cds-WP_023230665.1;Parent=gene-CCO35_RS04550;Dbxref=GenBank:WP_023230665.1;Name=WP_023230665.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=CCO35_RS04550;product=DNA-binding protein YbiB;protein_id=WP_023230665.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 855177 857321 . - . ID=gene-CCO35_RS04555;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=CCO35_RS04555;old_locus_tag=CCO35_04550 NZ_NPME01000001.1 Protein Homology CDS 855177 857321 . - 0 ID=cds-WP_001218626.1;Parent=gene-CCO35_RS04555;Dbxref=GenBank:WP_001218626.1;Name=WP_001218626.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=CCO35_RS04555;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218626.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 857529 858890 . - . ID=gene-CCO35_RS04560;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=CCO35_RS04560;old_locus_tag=CCO35_04555 NZ_NPME01000001.1 Protein Homology CDS 857529 858890 . - 0 ID=cds-WP_000007065.1;Parent=gene-CCO35_RS04560;Dbxref=GenBank:WP_000007065.1;Name=WP_000007065.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=CCO35_RS04560;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007065.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 859120 859794 . + . ID=gene-CCO35_RS04565;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=CCO35_RS04565;old_locus_tag=CCO35_04560 NZ_NPME01000001.1 Protein Homology CDS 859120 859794 . + 0 ID=cds-WP_001025260.1;Parent=gene-CCO35_RS04565;Dbxref=GenBank:WP_001025260.1;Name=WP_001025260.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=CCO35_RS04565;product=transcriptional regulator CecR;protein_id=WP_001025260.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 859794 860789 . + . ID=gene-CCO35_RS04570;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=CCO35_RS04570;old_locus_tag=CCO35_04565 NZ_NPME01000001.1 Protein Homology CDS 859794 860789 . + 0 ID=cds-WP_000743431.1;Parent=gene-CCO35_RS04570;Dbxref=GenBank:WP_000743431.1;Name=WP_000743431.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=CCO35_RS04570;product=secretion protein HlyD;protein_id=WP_000743431.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 860782 862518 . + . ID=gene-CCO35_RS04575;Name=CCO35_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04575;old_locus_tag=CCO35_04570 NZ_NPME01000001.1 Protein Homology CDS 860782 862518 . + 0 ID=cds-WP_001287609.1;Parent=gene-CCO35_RS04575;Dbxref=GenBank:WP_001287609.1;Name=WP_001287609.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=CCO35_RS04575;product=ATP-binding cassette domain-containing protein;protein_id=WP_001287609.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 862511 863641 . + . ID=gene-CCO35_RS04580;Name=CCO35_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04580;old_locus_tag=CCO35_04575 NZ_NPME01000001.1 Protein Homology CDS 862511 863641 . + 0 ID=cds-WP_000045765.1;Parent=gene-CCO35_RS04580;Dbxref=GenBank:WP_000045765.1;Name=WP_000045765.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=CCO35_RS04580;product=ABC transporter permease;protein_id=WP_000045765.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 863757 864863 . + . ID=gene-CCO35_RS04585;Name=CCO35_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04585;old_locus_tag=CCO35_04580 NZ_NPME01000001.1 Protein Homology CDS 863757 864863 . + 0 ID=cds-WP_000469050.1;Parent=gene-CCO35_RS04585;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=CCO35_RS04585;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 864825 865235 . - . ID=gene-CCO35_RS04590;Name=CCO35_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04590;old_locus_tag=CCO35_04585 NZ_NPME01000001.1 Protein Homology CDS 864825 865235 . - 0 ID=cds-WP_000871970.1;Parent=gene-CCO35_RS04590;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=CCO35_RS04590;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 865368 866126 . + . ID=gene-CCO35_RS04595;Name=CCO35_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04595;old_locus_tag=CCO35_04590 NZ_NPME01000001.1 Protein Homology CDS 865368 866126 . + 0 ID=cds-WP_000192039.1;Parent=gene-CCO35_RS04595;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=CCO35_RS04595;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 866123 867364 . + . ID=gene-CCO35_RS04600;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=CCO35_RS04600;old_locus_tag=CCO35_04595 NZ_NPME01000001.1 Protein Homology CDS 866123 867364 . + 0 ID=cds-WP_000649639.1;Parent=gene-CCO35_RS04600;Dbxref=GenBank:WP_000649639.1;Name=WP_000649639.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=CCO35_RS04600;product=cardiolipin synthase ClsB;protein_id=WP_000649639.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 867364 868326 . + . ID=gene-CCO35_RS04605;Name=CCO35_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04605;old_locus_tag=CCO35_04600 NZ_NPME01000001.1 Protein Homology CDS 867364 868326 . + 0 ID=cds-WP_001129824.1;Parent=gene-CCO35_RS04605;Dbxref=GenBank:WP_001129824.1;Name=WP_001129824.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=CCO35_RS04605;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_001129824.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 868329 868577 . - . ID=gene-CCO35_RS04610;Name=CCO35_RS04610;end_range=868577,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS04610;old_locus_tag=CCO35_04605;partial=true;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 868329 868577 . - 0 ID=cds-CCO35_RS04610;Parent=gene-CCO35_RS04610;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=868577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=CCO35_RS04610;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 868504 868737 . - . ID=gene-CCO35_RS23955;Name=CCO35_RS23955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23955;old_locus_tag=CCO35_04610;partial=true;pseudo=true;start_range=.,868504 NZ_NPME01000001.1 Protein Homology CDS 868504 868737 . - 0 ID=cds-CCO35_RS23955;Parent=gene-CCO35_RS23955;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=CCO35_RS23955;partial=true;product=hypothetical protein;pseudo=true;start_range=.,868504;transl_table=11 NZ_NPME01000001.1 RefSeq gene 868761 869468 . - . ID=gene-CCO35_RS04620;Name=CCO35_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04620;old_locus_tag=CCO35_04615 NZ_NPME01000001.1 Protein Homology CDS 868761 869468 . - 0 ID=cds-WP_000529072.1;Parent=gene-CCO35_RS04620;Dbxref=GenBank:WP_000529072.1;Name=WP_000529072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=CCO35_RS04620;product=Bax inhibitor-1 family protein;protein_id=WP_000529072.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 869614 870318 . - . ID=gene-CCO35_RS04630;Name=CCO35_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04630;old_locus_tag=CCO35_04625 NZ_NPME01000001.1 Protein Homology CDS 869614 870318 . - 0 ID=cds-WP_000373611.1;Parent=gene-CCO35_RS04630;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=CCO35_RS04630;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 870366 870818 . - . ID=gene-CCO35_RS04635;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=CCO35_RS04635;old_locus_tag=CCO35_04630 NZ_NPME01000001.1 Protein Homology CDS 870366 870818 . - 0 ID=cds-WP_000545204.1;Parent=gene-CCO35_RS04635;Dbxref=GenBank:WP_000545204.1;Name=WP_000545204.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=CCO35_RS04635;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000545204.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 870820 871065 . - . ID=gene-CCO35_RS04640;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=CCO35_RS04640;old_locus_tag=CCO35_04635 NZ_NPME01000001.1 Protein Homology CDS 870820 871065 . - 0 ID=cds-WP_000598596.1;Parent=gene-CCO35_RS04640;Dbxref=GenBank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=CCO35_RS04640;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 871058 871543 . - . ID=gene-CCO35_RS04645;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CCO35_RS04645;old_locus_tag=CCO35_04640 NZ_NPME01000001.1 Protein Homology CDS 871058 871543 . - 0 ID=cds-WP_000080894.1;Parent=gene-CCO35_RS04645;Dbxref=GenBank:WP_000080894.1;Name=WP_000080894.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=CCO35_RS04645;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080894.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 871546 872058 . - . ID=gene-CCO35_RS04650;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=CCO35_RS04650;old_locus_tag=CCO35_04645 NZ_NPME01000001.1 Protein Homology CDS 871546 872058 . - 0 ID=cds-WP_000084604.1;Parent=gene-CCO35_RS04650;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=CCO35_RS04650;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 872080 873069 . - . ID=gene-CCO35_RS04655;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CCO35_RS04655;old_locus_tag=CCO35_04650 NZ_NPME01000001.1 Protein Homology CDS 872080 873069 . - 0 ID=cds-WP_000168180.1;Parent=gene-CCO35_RS04655;Dbxref=GenBank:WP_000168180.1;Name=WP_000168180.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=CCO35_RS04655;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168180.1;transl_table=11 NZ_NPME01000001.1 cmsearch riboswitch 873057 873201 . - . ID=id-NZ_NPME01000001.1:873057..873201;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPME01000001.1 RefSeq gene 873466 874374 . + . ID=gene-CCO35_RS04660;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=CCO35_RS04660;old_locus_tag=CCO35_04655 NZ_NPME01000001.1 Protein Homology CDS 873466 874374 . + 0 ID=cds-WP_001246031.1;Parent=gene-CCO35_RS04660;Dbxref=GenBank:WP_001246031.1;Name=WP_001246031.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=CCO35_RS04660;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246031.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 874466 876733 . - . ID=gene-CCO35_RS04665;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=CCO35_RS04665;old_locus_tag=CCO35_04660 NZ_NPME01000001.1 Protein Homology CDS 874466 876733 . - 0 ID=cds-WP_000482002.1;Parent=gene-CCO35_RS04665;Dbxref=GenBank:WP_000482002.1;Name=WP_000482002.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=CCO35_RS04665;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_000482002.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 876741 876914 . - . ID=gene-CCO35_RS04670;Name=CCO35_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04670;old_locus_tag=CCO35_04665 NZ_NPME01000001.1 Protein Homology CDS 876741 876914 . - 0 ID=cds-WP_001563585.1;Parent=gene-CCO35_RS04670;Dbxref=GenBank:WP_001563585.1;Name=WP_001563585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=CCO35_RS04670;product=hypothetical protein;protein_id=WP_001563585.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 877222 879243 . - . ID=gene-CCO35_RS04675;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CCO35_RS04675;old_locus_tag=CCO35_04670 NZ_NPME01000001.1 Protein Homology CDS 877222 879243 . - 0 ID=cds-WP_031570028.1;Parent=gene-CCO35_RS04675;Dbxref=GenBank:WP_031570028.1;Name=WP_031570028.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=CCO35_RS04675;product=excinuclease ABC subunit UvrB;protein_id=WP_031570028.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 879894 880580 . - . ID=gene-CCO35_RS04685;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO35_RS04685;old_locus_tag=CCO35_04680 NZ_NPME01000001.1 Protein Homology CDS 879894 880580 . - 0 ID=cds-WP_000167212.1;Parent=gene-CCO35_RS04685;Dbxref=GenBank:WP_000167212.1;Name=WP_000167212.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=CCO35_RS04685;product=dethiobiotin synthase;protein_id=WP_000167212.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 880573 881328 . - . ID=gene-CCO35_RS04690;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=CCO35_RS04690;old_locus_tag=CCO35_04685 NZ_NPME01000001.1 Protein Homology CDS 880573 881328 . - 0 ID=cds-WP_000079908.1;Parent=gene-CCO35_RS04690;Dbxref=GenBank:WP_000079908.1;Name=WP_000079908.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=CCO35_RS04690;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079908.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 881312 882469 . - . ID=gene-CCO35_RS04695;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=CCO35_RS04695;old_locus_tag=CCO35_04690 NZ_NPME01000001.1 Protein Homology CDS 881312 882469 . - 0 ID=cds-WP_023212643.1;Parent=gene-CCO35_RS04695;Dbxref=GenBank:WP_023212643.1;Name=WP_023212643.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=CCO35_RS04695;product=8-amino-7-oxononanoate synthase;protein_id=WP_023212643.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 882466 883506 . - . ID=gene-CCO35_RS04700;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CCO35_RS04700;old_locus_tag=CCO35_04695 NZ_NPME01000001.1 Protein Homology CDS 882466 883506 . - 0 ID=cds-WP_094965319.1;Parent=gene-CCO35_RS04700;Dbxref=GenBank:WP_094965319.1;Name=WP_094965319.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=CCO35_RS04700;product=biotin synthase BioB;protein_id=WP_094965319.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 883593 884882 . + . ID=gene-CCO35_RS04705;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CCO35_RS04705;old_locus_tag=CCO35_04700 NZ_NPME01000001.1 Protein Homology CDS 883593 884882 . + 0 ID=cds-WP_001611216.1;Parent=gene-CCO35_RS04705;Dbxref=GenBank:WP_001611216.1;Name=WP_001611216.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=CCO35_RS04705;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_001611216.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 884940 885416 . + . ID=gene-CCO35_RS04710;Name=CCO35_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04710;old_locus_tag=CCO35_04705 NZ_NPME01000001.1 Protein Homology CDS 884940 885416 . + 0 ID=cds-WP_023136836.1;Parent=gene-CCO35_RS04710;Dbxref=GenBank:WP_023136836.1;Name=WP_023136836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=CCO35_RS04710;product=kinase inhibitor;protein_id=WP_023136836.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 885501 887021 . - . ID=gene-CCO35_RS04715;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CCO35_RS04715;old_locus_tag=CCO35_04710 NZ_NPME01000001.1 Protein Homology CDS 885501 887021 . - 0 ID=cds-WP_023136835.1;Parent=gene-CCO35_RS04715;Dbxref=GenBank:WP_023136835.1;Name=WP_023136835.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=CCO35_RS04715;product=histidine ammonia-lyase;protein_id=WP_023136835.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 887018 888709 . - . ID=gene-CCO35_RS04720;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CCO35_RS04720;old_locus_tag=CCO35_04715 NZ_NPME01000001.1 Protein Homology CDS 887018 888709 . - 0 ID=cds-WP_001115216.1;Parent=gene-CCO35_RS04720;Dbxref=GenBank:WP_001115216.1;Name=WP_001115216.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001115216.1;locus_tag=CCO35_RS04720;product=urocanate hydratase;protein_id=WP_001115216.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 888906 889631 . - . ID=gene-CCO35_RS04725;Name=CCO35_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04725;old_locus_tag=CCO35_04720 NZ_NPME01000001.1 Protein Homology CDS 888906 889631 . - 0 ID=cds-WP_000287407.1;Parent=gene-CCO35_RS04725;Dbxref=GenBank:WP_000287407.1;Name=WP_000287407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=CCO35_RS04725;product=histidine utilization repressor;protein_id=WP_000287407.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 889676 890617 . - . ID=gene-CCO35_RS04730;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CCO35_RS04730;old_locus_tag=CCO35_04725 NZ_NPME01000001.1 Protein Homology CDS 889676 890617 . - 0 ID=cds-WP_094965320.1;Parent=gene-CCO35_RS04730;Dbxref=GenBank:WP_094965320.1;Name=WP_094965320.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=CCO35_RS04730;product=formimidoylglutamase;protein_id=WP_094965320.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 890614 891837 . - . ID=gene-CCO35_RS04735;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CCO35_RS04735;old_locus_tag=CCO35_04730 NZ_NPME01000001.1 Protein Homology CDS 890614 891837 . - 0 ID=cds-WP_001249490.1;Parent=gene-CCO35_RS04735;Dbxref=GenBank:WP_001249490.1;Name=WP_001249490.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=CCO35_RS04735;product=imidazolonepropionase;protein_id=WP_001249490.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 892075 893358 . + . ID=gene-CCO35_RS04740;Name=CCO35_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04740;old_locus_tag=CCO35_04735 NZ_NPME01000001.1 Protein Homology CDS 892075 893358 . + 0 ID=cds-WP_001094764.1;Parent=gene-CCO35_RS04740;Dbxref=GenBank:WP_001094764.1;Name=WP_001094764.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=CCO35_RS04740;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094764.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 893482 894477 . - . ID=gene-CCO35_RS04745;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=CCO35_RS04745;old_locus_tag=CCO35_04740 NZ_NPME01000001.1 Protein Homology CDS 893482 894477 . - 0 ID=cds-WP_000815468.1;Parent=gene-CCO35_RS04745;Dbxref=GenBank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=CCO35_RS04745;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 894641 894790 . + . ID=gene-CCO35_RS04750;Name=CCO35_RS04750;end_range=894790,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS04750;old_locus_tag=CCO35_04745;partial=true;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 894641 894790 . + 0 ID=cds-CCO35_RS04750;Parent=gene-CCO35_RS04750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=894790,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=CCO35_RS04750;partial=true;product=HAD hydrolase family protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 894921 895757 . + . ID=gene-CCO35_RS04755;Name=CCO35_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04755;old_locus_tag=CCO35_04750 NZ_NPME01000001.1 Protein Homology CDS 894921 895757 . + 0 ID=cds-WP_001109271.1;Parent=gene-CCO35_RS04755;Dbxref=GenBank:WP_001109271.1;Name=WP_001109271.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109271.1;locus_tag=CCO35_RS04755;product=pyridoxal phosphatase;protein_id=WP_001109271.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 895780 895944 . + . ID=gene-CCO35_RS23790;Name=CCO35_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23790 NZ_NPME01000001.1 GeneMarkS-2+ CDS 895780 895944 . + 0 ID=cds-WP_023139965.1;Parent=gene-CCO35_RS23790;Dbxref=GenBank:WP_023139965.1;Name=WP_023139965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS23790;product=hypothetical protein;protein_id=WP_023139965.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 896075 896536 . + . ID=gene-CCO35_RS24275;Name=CCO35_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24275 NZ_NPME01000001.1 Protein Homology CDS 896075 896536 . + 0 ID=cds-WP_024151559.1;Parent=gene-CCO35_RS24275;Dbxref=GenBank:WP_024151559.1;Name=WP_024151559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154057295.1;locus_tag=CCO35_RS24275;product=STM2901 family protein;protein_id=WP_024151559.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 896521 896850 . + . ID=gene-CCO35_RS04770;Name=CCO35_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04770;old_locus_tag=CCO35_04765 NZ_NPME01000001.1 Protein Homology CDS 896521 896850 . + 0 ID=cds-WP_077912235.1;Parent=gene-CCO35_RS04770;Dbxref=GenBank:WP_077912235.1;Name=WP_077912235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=CCO35_RS04770;product=DUF1493 family protein;protein_id=WP_077912235.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 897224 897379 . + . ID=gene-CCO35_RS04775;Name=CCO35_RS04775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS04775;old_locus_tag=CCO35_04770;partial=true;pseudo=true;start_range=.,897224 NZ_NPME01000001.1 Protein Homology CDS 897224 897379 . + 0 ID=cds-CCO35_RS04775;Parent=gene-CCO35_RS04775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=CCO35_RS04775;partial=true;product=HAD hydrolase family protein;pseudo=true;start_range=.,897224;transl_table=11 NZ_NPME01000001.1 RefSeq gene 897380 898438 . - . ID=gene-CCO35_RS04780;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=CCO35_RS04780;old_locus_tag=CCO35_04775 NZ_NPME01000001.1 Protein Homology CDS 897380 898438 . - 0 ID=cds-WP_000891710.1;Parent=gene-CCO35_RS04780;Dbxref=GenBank:WP_000891710.1;Name=WP_000891710.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=CCO35_RS04780;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891710.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 898441 899130 . - . ID=gene-CCO35_RS04785;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CCO35_RS04785;old_locus_tag=CCO35_04780 NZ_NPME01000001.1 Protein Homology CDS 898441 899130 . - 0 ID=cds-WP_000604026.1;Parent=gene-CCO35_RS04785;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=CCO35_RS04785;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 899130 899903 . - . ID=gene-CCO35_RS04790;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CCO35_RS04790;old_locus_tag=CCO35_04785 NZ_NPME01000001.1 Protein Homology CDS 899130 899903 . - 0 ID=cds-WP_031570049.1;Parent=gene-CCO35_RS04790;Dbxref=GenBank:WP_031570049.1;Name=WP_031570049.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=CCO35_RS04790;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_031570049.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 900070 900219 . - . ID=gene-CCO35_RS04795;Name=CCO35_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04795;old_locus_tag=CCO35_04790 NZ_NPME01000001.1 Protein Homology CDS 900070 900219 . - 0 ID=cds-WP_000891513.1;Parent=gene-CCO35_RS04795;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=CCO35_RS04795;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 900348 901136 . + . ID=gene-CCO35_RS04800;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=CCO35_RS04800;old_locus_tag=CCO35_04795 NZ_NPME01000001.1 Protein Homology CDS 900348 901136 . + 0 ID=cds-WP_001147416.1;Parent=gene-CCO35_RS04800;Dbxref=GenBank:WP_001147416.1;Name=WP_001147416.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=CCO35_RS04800;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147416.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 901204 902679 . + . ID=gene-CCO35_RS04810;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=CCO35_RS04810;old_locus_tag=CCO35_04805 NZ_NPME01000001.1 Protein Homology CDS 901204 902679 . + 0 ID=cds-WP_031570054.1;Parent=gene-CCO35_RS04810;Dbxref=GenBank:WP_031570054.1;Name=WP_031570054.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=CCO35_RS04810;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_031570054.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 902850 903758 . + . ID=gene-CCO35_RS04815;Name=CCO35_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04815;old_locus_tag=CCO35_04810 NZ_NPME01000001.1 Protein Homology CDS 902850 903758 . + 0 ID=cds-WP_000885522.1;Parent=gene-CCO35_RS04815;Dbxref=GenBank:WP_000885522.1;Name=WP_000885522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=CCO35_RS04815;product=DUF2167 domain-containing protein;protein_id=WP_000885522.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 903981 904997 . + . ID=gene-CCO35_RS04820;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CCO35_RS04820;old_locus_tag=CCO35_04815 NZ_NPME01000001.1 Protein Homology CDS 903981 904997 . + 0 ID=cds-WP_001265457.1;Parent=gene-CCO35_RS04820;Dbxref=GenBank:WP_001265457.1;Name=WP_001265457.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=CCO35_RS04820;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265457.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 905008 906054 . + . ID=gene-CCO35_RS04825;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CCO35_RS04825;old_locus_tag=CCO35_04820 NZ_NPME01000001.1 Protein Homology CDS 905008 906054 . + 0 ID=cds-WP_000187473.1;Parent=gene-CCO35_RS04825;Dbxref=GenBank:WP_000187473.1;Name=WP_000187473.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=CCO35_RS04825;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187473.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 906057 907205 . + . ID=gene-CCO35_RS04830;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=CCO35_RS04830;old_locus_tag=CCO35_04825 NZ_NPME01000001.1 Protein Homology CDS 906057 907205 . + 0 ID=cds-WP_031570061.1;Parent=gene-CCO35_RS04830;Dbxref=GenBank:WP_031570061.1;Name=WP_031570061.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=CCO35_RS04830;product=galactokinase;protein_id=WP_031570061.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 907199 908239 . + . ID=gene-CCO35_RS04835;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=CCO35_RS04835;old_locus_tag=CCO35_04830 NZ_NPME01000001.1 Protein Homology CDS 907199 908239 . + 0 ID=cds-WP_000931428.1;Parent=gene-CCO35_RS04835;Dbxref=GenBank:WP_000931428.1;Name=WP_000931428.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=CCO35_RS04835;product=galactose-1-epimerase;protein_id=WP_000931428.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 908463 909215 . + . ID=gene-CCO35_RS04845;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=CCO35_RS04845;old_locus_tag=CCO35_04840 NZ_NPME01000001.1 Protein Homology CDS 908463 909215 . + 0 ID=cds-WP_000301554.1;Parent=gene-CCO35_RS04845;Dbxref=GenBank:WP_000301554.1;Name=WP_000301554.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=CCO35_RS04845;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301554.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 909306 910082 . - . ID=gene-CCO35_RS04850;Name=CCO35_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04850;old_locus_tag=CCO35_04845 NZ_NPME01000001.1 Protein Homology CDS 909306 910082 . - 0 ID=cds-WP_001214710.1;Parent=gene-CCO35_RS04850;Dbxref=GenBank:WP_001214710.1;Name=WP_001214710.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=CCO35_RS04850;product=ABC transporter ATP-binding protein;protein_id=WP_001214710.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 910082 911161 . - . ID=gene-CCO35_RS04855;Name=CCO35_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04855;old_locus_tag=CCO35_04850 NZ_NPME01000001.1 Protein Homology CDS 910082 911161 . - 0 ID=cds-WP_023137459.1;Parent=gene-CCO35_RS04855;Dbxref=GenBank:WP_023137459.1;Name=WP_023137459.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=CCO35_RS04855;product=FecCD family ABC transporter permease;protein_id=WP_023137459.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 911315 912367 . - . ID=gene-CCO35_RS04860;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=CCO35_RS04860;old_locus_tag=CCO35_04855 NZ_NPME01000001.1 Protein Homology CDS 911315 912367 . - 0 ID=cds-WP_001528822.1;Parent=gene-CCO35_RS04860;Dbxref=GenBank:WP_001528822.1;Name=WP_001528822.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=CCO35_RS04860;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001528822.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 912687 913073 . + . ID=gene-CCO35_RS04865;Name=CCO35_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS04865;old_locus_tag=CCO35_04860 NZ_NPME01000001.1 Protein Homology CDS 912687 913073 . + 0 ID=cds-WP_000784380.1;Parent=gene-CCO35_RS04865;Dbxref=GenBank:WP_000784380.1;Name=WP_000784380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=CCO35_RS04865;product=YbgS-like family protein;protein_id=WP_000784380.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 913184 914122 . + . ID=gene-CCO35_RS04870;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=CCO35_RS04870;old_locus_tag=CCO35_04865 NZ_NPME01000001.1 Protein Homology CDS 913184 914122 . + 0 ID=cds-WP_000951250.1;Parent=gene-CCO35_RS04870;Dbxref=GenBank:WP_000951250.1;Name=WP_000951250.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=CCO35_RS04870;product=CDF family zinc transporter ZitB;protein_id=WP_000951250.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 914119 914838 . - . ID=gene-CCO35_RS04875;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=CCO35_RS04875;old_locus_tag=CCO35_04870 NZ_NPME01000001.1 Protein Homology CDS 914119 914838 . - 0 ID=cds-WP_000345376.1;Parent=gene-CCO35_RS04875;Dbxref=GenBank:WP_000345376.1;Name=WP_000345376.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=CCO35_RS04875;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345376.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 914863 915906 . - . ID=gene-CCO35_RS04880;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=CCO35_RS04880;old_locus_tag=CCO35_04875 NZ_NPME01000001.1 Protein Homology CDS 914863 915906 . - 0 ID=cds-WP_000115342.1;Parent=gene-CCO35_RS04880;Dbxref=GenBank:WP_000115342.1;Name=WP_000115342.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=CCO35_RS04880;product=quinolinate synthase NadA;protein_id=WP_000115342.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 916201 916326 . - . ID=gene-CCO35_RS04885;Name=CCO35_RS04885;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO35_RS04885;old_locus_tag=CCO35_04880 NZ_NPME01000001.1 cmsearch ncRNA 916201 916326 . - . ID=rna-CCO35_RS04885;Parent=gene-CCO35_RS04885;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS04885;product=RtT sRNA NZ_NPME01000001.1 cmsearch exon 916201 916326 . - . ID=exon-CCO35_RS04885-1;Parent=rna-CCO35_RS04885;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS04885;product=RtT sRNA NZ_NPME01000001.1 RefSeq gene 916356 916431 . - . ID=gene-CCO35_RS04890;Name=CCO35_RS04890;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS04890;old_locus_tag=CCO35_04885 NZ_NPME01000001.1 tRNAscan-SE tRNA 916356 916431 . - . ID=rna-CCO35_RS04890;Parent=gene-CCO35_RS04890;anticodon=(pos:complement(916396..916398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04890;product=tRNA-Lys NZ_NPME01000001.1 tRNAscan-SE exon 916356 916431 . - . ID=exon-CCO35_RS04890-1;Parent=rna-CCO35_RS04890;anticodon=(pos:complement(916396..916398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04890;product=tRNA-Lys NZ_NPME01000001.1 RefSeq gene 916566 916641 . - . ID=gene-CCO35_RS04895;Name=CCO35_RS04895;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS04895;old_locus_tag=CCO35_04890 NZ_NPME01000001.1 tRNAscan-SE tRNA 916566 916641 . - . ID=rna-CCO35_RS04895;Parent=gene-CCO35_RS04895;anticodon=(pos:complement(916606..916608));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04895;product=tRNA-Lys NZ_NPME01000001.1 tRNAscan-SE exon 916566 916641 . - . ID=exon-CCO35_RS04895-1;Parent=rna-CCO35_RS04895;anticodon=(pos:complement(916606..916608));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04895;product=tRNA-Lys NZ_NPME01000001.1 RefSeq gene 916692 916767 . - . ID=gene-CCO35_RS04900;Name=CCO35_RS04900;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS04900;old_locus_tag=CCO35_04895 NZ_NPME01000001.1 tRNAscan-SE tRNA 916692 916767 . - . ID=rna-CCO35_RS04900;Parent=gene-CCO35_RS04900;anticodon=(pos:complement(916732..916734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04900;product=tRNA-Lys NZ_NPME01000001.1 tRNAscan-SE exon 916692 916767 . - . ID=exon-CCO35_RS04900-1;Parent=rna-CCO35_RS04900;anticodon=(pos:complement(916732..916734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04900;product=tRNA-Lys NZ_NPME01000001.1 RefSeq gene 916771 916846 . - . ID=gene-CCO35_RS04905;Name=CCO35_RS04905;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS04905;old_locus_tag=CCO35_04900 NZ_NPME01000001.1 tRNAscan-SE tRNA 916771 916846 . - . ID=rna-CCO35_RS04905;Parent=gene-CCO35_RS04905;anticodon=(pos:complement(916811..916813));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04905;product=tRNA-Val NZ_NPME01000001.1 tRNAscan-SE exon 916771 916846 . - . ID=exon-CCO35_RS04905-1;Parent=rna-CCO35_RS04905;anticodon=(pos:complement(916811..916813));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04905;product=tRNA-Val NZ_NPME01000001.1 RefSeq gene 916983 917058 . - . ID=gene-CCO35_RS04910;Name=CCO35_RS04910;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS04910;old_locus_tag=CCO35_04905 NZ_NPME01000001.1 tRNAscan-SE tRNA 916983 917058 . - . ID=rna-CCO35_RS04910;Parent=gene-CCO35_RS04910;anticodon=(pos:complement(917023..917025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04910;product=tRNA-Lys NZ_NPME01000001.1 tRNAscan-SE exon 916983 917058 . - . ID=exon-CCO35_RS04910-1;Parent=rna-CCO35_RS04910;anticodon=(pos:complement(917023..917025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS04910;product=tRNA-Lys NZ_NPME01000001.1 RefSeq gene 917223 918011 . - . ID=gene-CCO35_RS04915;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=CCO35_RS04915;old_locus_tag=CCO35_04910 NZ_NPME01000001.1 Protein Homology CDS 917223 918011 . - 0 ID=cds-WP_000097551.1;Parent=gene-CCO35_RS04915;Dbxref=GenBank:WP_000097551.1;Name=WP_000097551.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=CCO35_RS04915;product=cell division protein CpoB;protein_id=WP_000097551.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 918021 918545 . - . ID=gene-CCO35_RS04920;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=CCO35_RS04920;old_locus_tag=CCO35_04915 NZ_NPME01000001.1 Protein Homology CDS 918021 918545 . - 0 ID=cds-WP_001176621.1;Parent=gene-CCO35_RS04920;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=CCO35_RS04920;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 918580 919872 . - . ID=gene-CCO35_RS04925;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=CCO35_RS04925;old_locus_tag=CCO35_04920 NZ_NPME01000001.1 Protein Homology CDS 918580 919872 . - 0 ID=cds-WP_001562341.1;Parent=gene-CCO35_RS04925;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=CCO35_RS04925;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 919996 921174 . - . ID=gene-CCO35_RS04930;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=CCO35_RS04930;old_locus_tag=CCO35_04925 NZ_NPME01000001.1 Protein Homology CDS 919996 921174 . - 0 ID=cds-WP_000030588.1;Parent=gene-CCO35_RS04930;Dbxref=GenBank:WP_000030588.1;Name=WP_000030588.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=CCO35_RS04930;product=cell envelope integrity protein TolA;protein_id=WP_000030588.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 921239 921667 . - . ID=gene-CCO35_RS04935;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=CCO35_RS04935;old_locus_tag=CCO35_04930 NZ_NPME01000001.1 Protein Homology CDS 921239 921667 . - 0 ID=cds-WP_000124676.1;Parent=gene-CCO35_RS04935;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=CCO35_RS04935;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 921671 922363 . - . ID=gene-CCO35_RS04940;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=CCO35_RS04940;old_locus_tag=CCO35_04935 NZ_NPME01000001.1 Protein Homology CDS 921671 922363 . - 0 ID=cds-WP_000131318.1;Parent=gene-CCO35_RS04940;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=CCO35_RS04940;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 922360 922764 . - . ID=gene-CCO35_RS04945;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=CCO35_RS04945;old_locus_tag=CCO35_04940 NZ_NPME01000001.1 Protein Homology CDS 922360 922764 . - 0 ID=cds-WP_001046240.1;Parent=gene-CCO35_RS04945;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=CCO35_RS04945;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 922993 923286 . - . ID=gene-CCO35_RS04950;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=CCO35_RS04950;old_locus_tag=CCO35_04945 NZ_NPME01000001.1 Protein Homology CDS 922993 923286 . - 0 ID=cds-WP_000148790.1;Parent=gene-CCO35_RS04950;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=CCO35_RS04950;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 923286 923399 . - . ID=gene-CCO35_RS04955;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=CCO35_RS04955;old_locus_tag=CCO35_04950 NZ_NPME01000001.1 Protein Homology CDS 923286 923399 . - 0 ID=cds-WP_000270278.1;Parent=gene-CCO35_RS04955;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=CCO35_RS04955;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 923414 924553 . - . ID=gene-CCO35_RS04960;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO35_RS04960;old_locus_tag=CCO35_04955 NZ_NPME01000001.1 Protein Homology CDS 923414 924553 . - 0 ID=cds-WP_000568258.1;Parent=gene-CCO35_RS04960;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=CCO35_RS04960;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 924569 926137 . - . ID=gene-CCO35_RS04965;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=CCO35_RS04965;old_locus_tag=CCO35_04960 NZ_NPME01000001.1 Protein Homology CDS 924569 926137 . - 0 ID=cds-WP_000884369.1;Parent=gene-CCO35_RS04965;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=CCO35_RS04965;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 927719 928588 . - . ID=gene-CCO35_RS04970;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CCO35_RS04970;old_locus_tag=CCO35_04965 NZ_NPME01000001.1 Protein Homology CDS 927719 928588 . - 0 ID=cds-WP_000114631.1;Parent=gene-CCO35_RS04970;Dbxref=GenBank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=CCO35_RS04970;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 928588 929754 . - . ID=gene-CCO35_RS04975;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CCO35_RS04975;old_locus_tag=CCO35_04970 NZ_NPME01000001.1 Protein Homology CDS 928588 929754 . - 0 ID=cds-WP_001048590.1;Parent=gene-CCO35_RS04975;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=CCO35_RS04975;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 929896 931104 . - . ID=gene-CCO35_RS04980;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=CCO35_RS04980;old_locus_tag=CCO35_04975 NZ_NPME01000001.1 Protein Homology CDS 929896 931104 . - 0 ID=cds-WP_000099858.1;Parent=gene-CCO35_RS04980;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=CCO35_RS04980;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 931119 933920 . - . ID=gene-CCO35_RS04985;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=CCO35_RS04985;old_locus_tag=CCO35_04980 NZ_NPME01000001.1 Protein Homology CDS 931119 933920 . - 0 ID=cds-WP_001181500.1;Parent=gene-CCO35_RS04985;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=CCO35_RS04985;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 934444 935160 . - . ID=gene-CCO35_RS04990;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CCO35_RS04990;old_locus_tag=CCO35_04985 NZ_NPME01000001.1 Protein Homology CDS 934444 935160 . - 0 ID=cds-WP_001537859.1;Parent=gene-CCO35_RS04990;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=CCO35_RS04990;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 935177 936943 . - . ID=gene-CCO35_RS04995;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CCO35_RS04995;old_locus_tag=CCO35_04990 NZ_NPME01000001.1 Protein Homology CDS 935177 936943 . - 0 ID=cds-WP_000775561.1;Parent=gene-CCO35_RS04995;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=CCO35_RS04995;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 936943 937290 . - . ID=gene-CCO35_RS05000;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=CCO35_RS05000;old_locus_tag=CCO35_04995 NZ_NPME01000001.1 Protein Homology CDS 936943 937290 . - 0 ID=cds-WP_000254356.1;Parent=gene-CCO35_RS05000;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=CCO35_RS05000;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 937284 937688 . - . ID=gene-CCO35_RS05005;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=CCO35_RS05005;old_locus_tag=CCO35_05000 NZ_NPME01000001.1 Protein Homology CDS 937284 937688 . - 0 ID=cds-WP_000263340.1;Parent=gene-CCO35_RS05005;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=CCO35_RS05005;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 938071 938202 . + . ID=gene-CCO35_RS24280;Name=CCO35_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24280 NZ_NPME01000001.1 Protein Homology CDS 938071 938202 . + 0 ID=cds-WP_418142699.1;Parent=gene-CCO35_RS24280;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=CCO35_RS24280;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 938428 939711 . + . ID=gene-CCO35_RS05020;Name=CCO35_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05020;old_locus_tag=CCO35_05015 NZ_NPME01000001.1 Protein Homology CDS 938428 939711 . + 0 ID=cds-WP_000785811.1;Parent=gene-CCO35_RS05020;Dbxref=GenBank:WP_000785811.1;Name=WP_000785811.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=CCO35_RS05020;product=citrate synthase;protein_id=WP_000785811.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 939848 940894 . + . ID=gene-CCO35_RS05025;Name=CCO35_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05025;old_locus_tag=CCO35_05020 NZ_NPME01000001.1 Protein Homology CDS 939848 940894 . + 0 ID=cds-WP_094965321.1;Parent=gene-CCO35_RS05025;Dbxref=GenBank:WP_094965321.1;Name=WP_094965321.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=CCO35_RS05025;product=AbrB family transcriptional regulator;protein_id=WP_094965321.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 940949 941740 . - . ID=gene-CCO35_RS05030;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=CCO35_RS05030;old_locus_tag=CCO35_05025 NZ_NPME01000001.1 Protein Homology CDS 940949 941740 . - 0 ID=cds-WP_001113962.1;Parent=gene-CCO35_RS05030;Dbxref=GenBank:WP_001113962.1;Name=WP_001113962.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=CCO35_RS05030;product=endonuclease VIII;protein_id=WP_001113962.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 941774 941926 . - . ID=gene-CCO35_RS05035;Name=CCO35_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05035;old_locus_tag=CCO35_05030 NZ_NPME01000001.1 Protein Homology CDS 941774 941926 . - 0 ID=cds-WP_001145918.1;Parent=gene-CCO35_RS05035;Dbxref=GenBank:WP_001145918.1;Name=WP_001145918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145914.1;locus_tag=CCO35_RS05035;product=hypothetical protein;protein_id=WP_001145918.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 941994 943889 . - . ID=gene-CCO35_RS05040;Name=CCO35_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05040;old_locus_tag=CCO35_05035 NZ_NPME01000001.1 Protein Homology CDS 941994 943889 . - 0 ID=cds-WP_077914925.1;Parent=gene-CCO35_RS05040;Dbxref=GenBank:WP_077914925.1;Name=WP_077914925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=CCO35_RS05040;product=HAD family hydrolase;protein_id=WP_077914925.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 943947 944780 . - . ID=gene-CCO35_RS05045;Name=CCO35_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05045;old_locus_tag=CCO35_05040 NZ_NPME01000001.1 Protein Homology CDS 943947 944780 . - 0 ID=cds-WP_023139969.1;Parent=gene-CCO35_RS05045;Dbxref=GenBank:WP_023139969.1;Name=WP_023139969.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=CCO35_RS05045;product=glycosyltransferase family A protein;protein_id=WP_023139969.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 944972 946750 . - . ID=gene-CCO35_RS05050;Name=CCO35_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05050;old_locus_tag=CCO35_05045 NZ_NPME01000001.1 Protein Homology CDS 944972 946750 . - 0 ID=cds-WP_031564141.1;Parent=gene-CCO35_RS05050;Dbxref=GenBank:WP_031564141.1;Name=WP_031564141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=CCO35_RS05050;product=glycosyltransferase;protein_id=WP_031564141.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 946844 947554 . - . ID=gene-CCO35_RS05055;Name=CCO35_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05055;old_locus_tag=CCO35_05050 NZ_NPME01000001.1 Protein Homology CDS 946844 947554 . - 0 ID=cds-WP_001528845.1;Parent=gene-CCO35_RS05055;Dbxref=GenBank:WP_001528845.1;Name=WP_001528845.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=CCO35_RS05055;product=ABC transporter ATP-binding protein;protein_id=WP_001528845.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 947558 948328 . - . ID=gene-CCO35_RS05060;Name=CCO35_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05060;old_locus_tag=CCO35_05055 NZ_NPME01000001.1 Protein Homology CDS 947558 948328 . - 0 ID=cds-WP_000998822.1;Parent=gene-CCO35_RS05060;Dbxref=GenBank:WP_000998822.1;Name=WP_000998822.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=CCO35_RS05060;product=ABC transporter permease;protein_id=WP_000998822.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 948456 949589 . - . ID=gene-CCO35_RS05065;Name=CCO35_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05065;old_locus_tag=CCO35_05060 NZ_NPME01000001.1 Protein Homology CDS 948456 949589 . - 0 ID=cds-WP_000824904.1;Parent=gene-CCO35_RS05065;Dbxref=GenBank:WP_000824904.1;Name=WP_000824904.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459706.1;locus_tag=CCO35_RS05065;product=glycosyltransferase family 4 protein;protein_id=WP_000824904.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 949602 950498 . - . ID=gene-CCO35_RS05070;Name=CCO35_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05070;old_locus_tag=CCO35_05065 NZ_NPME01000001.1 Protein Homology CDS 949602 950498 . - 0 ID=cds-WP_000973914.1;Parent=gene-CCO35_RS05070;Dbxref=GenBank:WP_000973914.1;Name=WP_000973914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459705.1;locus_tag=CCO35_RS05070;product=glycosyltransferase;protein_id=WP_000973914.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 950495 951646 . - . ID=gene-CCO35_RS05075;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=CCO35_RS05075;old_locus_tag=CCO35_05070 NZ_NPME01000001.1 Protein Homology CDS 950495 951646 . - 0 ID=cds-WP_001611119.1;Parent=gene-CCO35_RS05075;Dbxref=GenBank:WP_001611119.1;Name=WP_001611119.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=CCO35_RS05075;product=UDP-galactopyranose mutase;protein_id=WP_001611119.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 951932 952672 . - . ID=gene-CCO35_RS05080;Name=CCO35_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05080;old_locus_tag=CCO35_05075 NZ_NPME01000001.1 Protein Homology CDS 951932 952672 . - 0 ID=cds-WP_001194235.1;Parent=gene-CCO35_RS05080;Dbxref=GenBank:WP_001194235.1;Name=WP_001194235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459703.1;locus_tag=CCO35_RS05080;product=hypothetical protein;protein_id=WP_001194235.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 952674 953009 . - . ID=gene-CCO35_RS05085;Name=CCO35_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05085;old_locus_tag=CCO35_05080 NZ_NPME01000001.1 Protein Homology CDS 952674 953009 . - 0 ID=cds-WP_077906418.1;Parent=gene-CCO35_RS05085;Dbxref=GenBank:WP_077906418.1;Name=WP_077906418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=CCO35_RS05085;product=hypothetical protein;protein_id=WP_077906418.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 953469 954035 . - . ID=gene-CCO35_RS05090;Name=CCO35_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05090;old_locus_tag=CCO35_05085 NZ_NPME01000001.1 Protein Homology CDS 953469 954035 . - 0 ID=cds-WP_000824704.1;Parent=gene-CCO35_RS05090;Dbxref=GenBank:WP_000824704.1;Name=WP_000824704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459701.1;locus_tag=CCO35_RS05090;product=tyrosine-type DNA invertase;protein_id=WP_000824704.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 954095 954226 . - . ID=gene-CCO35_RS05095;Name=CCO35_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05095;old_locus_tag=CCO35_05090 NZ_NPME01000001.1 Protein Homology CDS 954095 954226 . - 0 ID=cds-WP_001528846.1;Parent=gene-CCO35_RS05095;Dbxref=GenBank:WP_001528846.1;Name=WP_001528846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=CCO35_RS05095;product=hypothetical protein;protein_id=WP_001528846.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 954550 955284 . - . ID=gene-CCO35_RS05100;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CCO35_RS05100;old_locus_tag=CCO35_05095 NZ_NPME01000001.1 Protein Homology CDS 954550 955284 . - 0 ID=cds-WP_001017905.1;Parent=gene-CCO35_RS05100;Dbxref=GenBank:WP_001017905.1;Name=WP_001017905.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017905.1;locus_tag=CCO35_RS05100;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017905.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 955274 956206 . - . ID=gene-CCO35_RS05105;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=CCO35_RS05105;old_locus_tag=CCO35_05100 NZ_NPME01000001.1 Protein Homology CDS 955274 956206 . - 0 ID=cds-WP_000932044.1;Parent=gene-CCO35_RS05105;Dbxref=GenBank:WP_000932044.1;Name=WP_000932044.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=CCO35_RS05105;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932044.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 956200 956856 . - . ID=gene-CCO35_RS05110;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CCO35_RS05110;old_locus_tag=CCO35_05105 NZ_NPME01000001.1 Protein Homology CDS 956200 956856 . - 0 ID=cds-WP_001188367.1;Parent=gene-CCO35_RS05110;Dbxref=GenBank:WP_001188367.1;Name=WP_001188367.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=CCO35_RS05110;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188367.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 956872 957615 . - . ID=gene-CCO35_RS05115;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=CCO35_RS05115;old_locus_tag=CCO35_05110 NZ_NPME01000001.1 Protein Homology CDS 956872 957615 . - 0 ID=cds-WP_000798844.1;Parent=gene-CCO35_RS05115;Dbxref=GenBank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=CCO35_RS05115;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 957944 959425 . + . ID=gene-CCO35_RS05125;Name=CCO35_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05125;old_locus_tag=CCO35_05120 NZ_NPME01000001.1 Protein Homology CDS 957944 959425 . + 0 ID=cds-WP_001041123.1;Parent=gene-CCO35_RS05125;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=CCO35_RS05125;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 959464 960885 . - . ID=gene-CCO35_RS05130;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=CCO35_RS05130;old_locus_tag=CCO35_05125 NZ_NPME01000001.1 Protein Homology CDS 959464 960885 . - 0 ID=cds-WP_094965322.1;Parent=gene-CCO35_RS05130;Dbxref=GenBank:WP_094965322.1;Name=WP_094965322.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=CCO35_RS05130;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_094965322.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 960996 961202 . - . ID=gene-CCO35_RS05135;Name=CCO35_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05135;old_locus_tag=CCO35_05130 NZ_NPME01000001.1 Protein Homology CDS 960996 961202 . - 0 ID=cds-WP_000401433.1;Parent=gene-CCO35_RS05135;Dbxref=GenBank:WP_000401433.1;Name=WP_000401433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=CCO35_RS05135;product=YbfA family protein;protein_id=WP_000401433.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 961539 961628 . + . ID=gene-CCO35_RS05140;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CCO35_RS05140;old_locus_tag=CCO35_05135 NZ_NPME01000001.1 Protein Homology CDS 961539 961628 . + 0 ID=cds-WP_001670793.1;Parent=gene-CCO35_RS05140;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=CCO35_RS05140;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 961628 963307 . + . ID=gene-CCO35_RS05145;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CCO35_RS05145;old_locus_tag=CCO35_05140 NZ_NPME01000001.1 Protein Homology CDS 961628 963307 . + 0 ID=cds-WP_094965323.1;Parent=gene-CCO35_RS05145;Dbxref=GenBank:WP_094965323.1;Name=WP_094965323.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=CCO35_RS05145;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_094965323.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 963328 965376 . + . ID=gene-CCO35_RS05150;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CCO35_RS05150;old_locus_tag=CCO35_05145 NZ_NPME01000001.1 Protein Homology CDS 963328 965376 . + 0 ID=cds-WP_000088039.1;Parent=gene-CCO35_RS05150;Dbxref=GenBank:WP_000088039.1;Name=WP_000088039.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=CCO35_RS05150;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000088039.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 965385 965969 . + . ID=gene-CCO35_RS05155;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CCO35_RS05155;old_locus_tag=CCO35_05150 NZ_NPME01000001.1 Protein Homology CDS 965385 965969 . + 0 ID=cds-WP_001528784.1;Parent=gene-CCO35_RS05155;Dbxref=GenBank:WP_001528784.1;Name=WP_001528784.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=CCO35_RS05155;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_001528784.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 965966 968650 . + . ID=gene-CCO35_RS05160;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=CCO35_RS05160;old_locus_tag=CCO35_05155 NZ_NPME01000001.1 Protein Homology CDS 965966 968650 . + 0 ID=cds-WP_023215223.1;Parent=gene-CCO35_RS05160;Dbxref=GenBank:WP_023215223.1;Name=WP_023215223.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=CCO35_RS05160;product=two-component system sensor histidine kinase KdpD;protein_id=WP_023215223.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 968647 969324 . + . ID=gene-CCO35_RS05165;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=CCO35_RS05165;old_locus_tag=CCO35_05160 NZ_NPME01000001.1 Protein Homology CDS 968647 969324 . + 0 ID=cds-WP_000186053.1;Parent=gene-CCO35_RS05165;Dbxref=GenBank:WP_000186053.1;Name=WP_000186053.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=CCO35_RS05165;product=two-component system response regulator KdpE;protein_id=WP_000186053.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 969602 969706 . + . ID=gene-CCO35_RS23590;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=CCO35_RS23590 NZ_NPME01000001.1 Protein Homology CDS 969602 969706 . + 0 ID=cds-WP_015632840.1;Parent=gene-CCO35_RS23590;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=CCO35_RS23590;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 970086 972284 . + . ID=gene-CCO35_RS05170;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=CCO35_RS05170;old_locus_tag=CCO35_05165 NZ_NPME01000001.1 Protein Homology CDS 970086 972284 . + 0 ID=cds-WP_001292402.1;Parent=gene-CCO35_RS05170;Dbxref=GenBank:WP_001292402.1;Name=WP_001292402.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=CCO35_RS05170;product=ornithine decarboxylase SpeF;protein_id=WP_001292402.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 972281 973600 . + . ID=gene-CCO35_RS05175;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=CCO35_RS05175;old_locus_tag=CCO35_05170 NZ_NPME01000001.1 Protein Homology CDS 972281 973600 . + 0 ID=cds-WP_000042658.1;Parent=gene-CCO35_RS05175;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=CCO35_RS05175;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 973665 974150 . + . ID=gene-CCO35_RS05180;Name=CCO35_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05180;old_locus_tag=CCO35_05175 NZ_NPME01000001.1 Protein Homology CDS 973665 974150 . + 0 ID=cds-WP_000070057.1;Parent=gene-CCO35_RS05180;Dbxref=GenBank:WP_000070057.1;Name=WP_000070057.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=CCO35_RS05180;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070057.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 974265 975905 . - . ID=gene-CCO35_RS05185;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=CCO35_RS05185;old_locus_tag=CCO35_05180 NZ_NPME01000001.1 Protein Homology CDS 974265 975905 . - 0 ID=cds-WP_000974372.1;Parent=gene-CCO35_RS05185;Dbxref=GenBank:WP_000974372.1;Name=WP_000974372.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=CCO35_RS05185;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974372.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 975930 976472 . - . ID=gene-CCO35_RS05190;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=CCO35_RS05190;old_locus_tag=CCO35_05185 NZ_NPME01000001.1 Protein Homology CDS 975930 976472 . - 0 ID=cds-WP_000848395.1;Parent=gene-CCO35_RS05190;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=CCO35_RS05190;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 976657 977427 . + . ID=gene-CCO35_RS05195;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=CCO35_RS05195;old_locus_tag=CCO35_05190 NZ_NPME01000001.1 Protein Homology CDS 976657 977427 . + 0 ID=cds-WP_000773249.1;Parent=gene-CCO35_RS05195;Dbxref=GenBank:WP_000773249.1;Name=WP_000773249.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=CCO35_RS05195;product=esterase;protein_id=WP_000773249.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 977561 977854 . + . ID=gene-CCO35_RS05200;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=CCO35_RS05200;old_locus_tag=CCO35_05195 NZ_NPME01000001.1 Protein Homology CDS 977561 977854 . + 0 ID=cds-WP_001040939.1;Parent=gene-CCO35_RS05200;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=CCO35_RS05200;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 978005 978535 . + . ID=gene-CCO35_RS05205;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=CCO35_RS05205;old_locus_tag=CCO35_05200 NZ_NPME01000001.1 Protein Homology CDS 978005 978535 . + 0 ID=cds-WP_001018621.1;Parent=gene-CCO35_RS05205;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=CCO35_RS05205;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 978739 978824 . + . ID=gene-CCO35_RS23865;Name=CCO35_RS23865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23865;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 978739 978824 . + 0 ID=cds-CCO35_RS23865;Parent=gene-CCO35_RS23865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=CCO35_RS23865;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 978817 979269 . + . ID=gene-CCO35_RS05210;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CCO35_RS05210;old_locus_tag=CCO35_05205 NZ_NPME01000001.1 Protein Homology CDS 978817 979269 . + 0 ID=cds-WP_000131699.1;Parent=gene-CCO35_RS05210;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=CCO35_RS05210;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 979384 980310 . + . ID=gene-CCO35_RS05215;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=CCO35_RS05215;old_locus_tag=CCO35_05210 NZ_NPME01000001.1 Protein Homology CDS 979384 980310 . + 0 ID=cds-WP_000423371.1;Parent=gene-CCO35_RS05215;Dbxref=GenBank:WP_000423371.1;Name=WP_000423371.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=CCO35_RS05215;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423371.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 980408 981811 . + . ID=gene-CCO35_RS05220;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=CCO35_RS05220;old_locus_tag=CCO35_05215 NZ_NPME01000001.1 Protein Homology CDS 980408 981811 . + 0 ID=cds-WP_000228705.1;Parent=gene-CCO35_RS05220;Dbxref=GenBank:WP_000228705.1;Name=WP_000228705.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=CCO35_RS05220;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228705.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 981798 982937 . + . ID=gene-CCO35_RS05225;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=CCO35_RS05225;old_locus_tag=CCO35_05220 NZ_NPME01000001.1 Protein Homology CDS 981798 982937 . + 0 ID=cds-WP_000811136.1;Parent=gene-CCO35_RS05225;Dbxref=GenBank:WP_000811136.1;Name=WP_000811136.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=CCO35_RS05225;product=tricarballylate utilization protein TcuB;protein_id=WP_000811136.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 982988 984292 . + . ID=gene-CCO35_RS05230;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=CCO35_RS05230;old_locus_tag=CCO35_05225 NZ_NPME01000001.1 Protein Homology CDS 982988 984292 . + 0 ID=cds-WP_000057014.1;Parent=gene-CCO35_RS05230;Dbxref=GenBank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=CCO35_RS05230;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 984341 984673 . - . ID=gene-CCO35_RS05235;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=CCO35_RS05235;old_locus_tag=CCO35_05230 NZ_NPME01000001.1 Protein Homology CDS 984341 984673 . - 0 ID=cds-WP_000722260.1;Parent=gene-CCO35_RS05235;Dbxref=GenBank:WP_000722260.1;Name=WP_000722260.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=CCO35_RS05235;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722260.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 984723 986129 . - . ID=gene-CCO35_RS05240;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=CCO35_RS05240;old_locus_tag=CCO35_05235 NZ_NPME01000001.1 Protein Homology CDS 984723 986129 . - 0 ID=cds-WP_001258803.1;Parent=gene-CCO35_RS05240;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=CCO35_RS05240;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 986729 988396 . - . ID=gene-CCO35_RS05250;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=CCO35_RS05250;old_locus_tag=CCO35_05245 NZ_NPME01000001.1 Protein Homology CDS 986729 988396 . - 0 ID=cds-WP_001287186.1;Parent=gene-CCO35_RS05250;Dbxref=GenBank:WP_001287186.1;Name=WP_001287186.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=CCO35_RS05250;product=glutamine--tRNA ligase;protein_id=WP_001287186.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 988607 990559 . - . ID=gene-CCO35_RS05255;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=CCO35_RS05255;old_locus_tag=CCO35_05250 NZ_NPME01000001.1 Protein Homology CDS 988607 990559 . - 0 ID=cds-WP_023262936.1;Parent=gene-CCO35_RS05255;Dbxref=GenBank:WP_023262936.1;Name=WP_023262936.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=CCO35_RS05255;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_023262936.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 990886 991686 . + . ID=gene-CCO35_RS05260;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CCO35_RS05260;old_locus_tag=CCO35_05255 NZ_NPME01000001.1 Protein Homology CDS 990886 991686 . + 0 ID=cds-WP_001237059.1;Parent=gene-CCO35_RS05260;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=CCO35_RS05260;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 991746 992900 . + . ID=gene-CCO35_RS05265;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CCO35_RS05265;old_locus_tag=CCO35_05260 NZ_NPME01000001.1 Protein Homology CDS 991746 992900 . + 0 ID=cds-WP_000271186.1;Parent=gene-CCO35_RS05265;Dbxref=GenBank:WP_000271186.1;Name=WP_000271186.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=CCO35_RS05265;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271186.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 992905 994125 . + . ID=gene-CCO35_RS05270;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=CCO35_RS05270;old_locus_tag=CCO35_05265 NZ_NPME01000001.1 Protein Homology CDS 992905 994125 . + 0 ID=cds-WP_000187579.1;Parent=gene-CCO35_RS05270;Dbxref=GenBank:WP_000187579.1;Name=WP_000187579.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=CCO35_RS05270;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187579.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 994172 994924 . + . ID=gene-CCO35_RS05275;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=CCO35_RS05275;old_locus_tag=CCO35_05270 NZ_NPME01000001.1 Protein Homology CDS 994172 994924 . + 0 ID=cds-WP_000153143.1;Parent=gene-CCO35_RS05275;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=CCO35_RS05275;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 995214 996878 . + . ID=gene-CCO35_RS05285;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=CCO35_RS05285;old_locus_tag=CCO35_05280 NZ_NPME01000001.1 Protein Homology CDS 995214 996878 . + 0 ID=cds-WP_000337032.1;Parent=gene-CCO35_RS05285;Dbxref=GenBank:WP_000337032.1;Name=WP_000337032.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=CCO35_RS05285;product=asparagine synthase B;protein_id=WP_000337032.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 997101 997177 . + . ID=gene-CCO35_RS05290;Name=CCO35_RS05290;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS05290;old_locus_tag=CCO35_05285 NZ_NPME01000001.1 tRNAscan-SE tRNA 997101 997177 . + . ID=rna-CCO35_RS05290;Parent=gene-CCO35_RS05290;anticodon=(pos:997135..997137);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05290;product=tRNA-Met NZ_NPME01000001.1 tRNAscan-SE exon 997101 997177 . + . ID=exon-CCO35_RS05290-1;Parent=rna-CCO35_RS05290;anticodon=(pos:997135..997137);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05290;product=tRNA-Met NZ_NPME01000001.1 RefSeq gene 997186 997270 . + . ID=gene-CCO35_RS05295;Name=CCO35_RS05295;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS05295;old_locus_tag=CCO35_05290 NZ_NPME01000001.1 tRNAscan-SE tRNA 997186 997270 . + . ID=rna-CCO35_RS05295;Parent=gene-CCO35_RS05295;anticodon=(pos:997220..997222);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05295;product=tRNA-Leu NZ_NPME01000001.1 tRNAscan-SE exon 997186 997270 . + . ID=exon-CCO35_RS05295-1;Parent=rna-CCO35_RS05295;anticodon=(pos:997220..997222);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05295;product=tRNA-Leu NZ_NPME01000001.1 RefSeq gene 997294 997368 . + . ID=gene-CCO35_RS05300;Name=CCO35_RS05300;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS05300;old_locus_tag=CCO35_05295 NZ_NPME01000001.1 tRNAscan-SE tRNA 997294 997368 . + . ID=rna-CCO35_RS05300;Parent=gene-CCO35_RS05300;anticodon=(pos:997326..997328);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05300;product=tRNA-Gln NZ_NPME01000001.1 tRNAscan-SE exon 997294 997368 . + . ID=exon-CCO35_RS05300-1;Parent=rna-CCO35_RS05300;anticodon=(pos:997326..997328);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05300;product=tRNA-Gln NZ_NPME01000001.1 RefSeq gene 997404 997478 . + . ID=gene-CCO35_RS05305;Name=CCO35_RS05305;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS05305;old_locus_tag=CCO35_05300 NZ_NPME01000001.1 tRNAscan-SE tRNA 997404 997478 . + . ID=rna-CCO35_RS05305;Parent=gene-CCO35_RS05305;anticodon=(pos:997436..997438);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05305;product=tRNA-Gln NZ_NPME01000001.1 tRNAscan-SE exon 997404 997478 . + . ID=exon-CCO35_RS05305-1;Parent=rna-CCO35_RS05305;anticodon=(pos:997436..997438);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05305;product=tRNA-Gln NZ_NPME01000001.1 RefSeq gene 997494 997570 . + . ID=gene-CCO35_RS05310;Name=CCO35_RS05310;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS05310;old_locus_tag=CCO35_05305 NZ_NPME01000001.1 tRNAscan-SE tRNA 997494 997570 . + . ID=rna-CCO35_RS05310;Parent=gene-CCO35_RS05310;anticodon=(pos:997528..997530);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05310;product=tRNA-Met NZ_NPME01000001.1 tRNAscan-SE exon 997494 997570 . + . ID=exon-CCO35_RS05310-1;Parent=rna-CCO35_RS05310;anticodon=(pos:997528..997530);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05310;product=tRNA-Met NZ_NPME01000001.1 RefSeq gene 997617 997691 . + . ID=gene-CCO35_RS05315;Name=CCO35_RS05315;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS05315;old_locus_tag=CCO35_05310 NZ_NPME01000001.1 tRNAscan-SE tRNA 997617 997691 . + . ID=rna-CCO35_RS05315;Parent=gene-CCO35_RS05315;anticodon=(pos:997649..997651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05315;product=tRNA-Gln NZ_NPME01000001.1 tRNAscan-SE exon 997617 997691 . + . ID=exon-CCO35_RS05315-1;Parent=rna-CCO35_RS05315;anticodon=(pos:997649..997651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05315;product=tRNA-Gln NZ_NPME01000001.1 RefSeq gene 997735 997809 . + . ID=gene-CCO35_RS05320;Name=CCO35_RS05320;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS05320;old_locus_tag=CCO35_05315 NZ_NPME01000001.1 tRNAscan-SE tRNA 997735 997809 . + . ID=rna-CCO35_RS05320;Parent=gene-CCO35_RS05320;anticodon=(pos:997767..997769);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05320;product=tRNA-Gln NZ_NPME01000001.1 tRNAscan-SE exon 997735 997809 . + . ID=exon-CCO35_RS05320-1;Parent=rna-CCO35_RS05320;anticodon=(pos:997767..997769);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05320;product=tRNA-Gln NZ_NPME01000001.1 RefSeq gene 997942 999117 . - . ID=gene-CCO35_RS05325;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=CCO35_RS05325;old_locus_tag=CCO35_05320 NZ_NPME01000001.1 Protein Homology CDS 997942 999117 . - 0 ID=cds-WP_023262949.1;Parent=gene-CCO35_RS05325;Dbxref=GenBank:WP_023262949.1;Name=WP_023262949.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=CCO35_RS05325;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_023262949.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 999261 1000685 . + . ID=gene-CCO35_RS05330;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CCO35_RS05330;old_locus_tag=CCO35_05325 NZ_NPME01000001.1 Protein Homology CDS 999261 1000685 . + 0 ID=cds-WP_001519200.1;Parent=gene-CCO35_RS05330;Dbxref=GenBank:WP_001519200.1;Name=WP_001519200.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=CCO35_RS05330;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001519200.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1000890 1001936 . + . ID=gene-CCO35_RS05335;Name=CCO35_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05335;old_locus_tag=CCO35_05330 NZ_NPME01000001.1 Protein Homology CDS 1000890 1001936 . + 0 ID=cds-WP_001018045.1;Parent=gene-CCO35_RS05335;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=CCO35_RS05335;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1001933 1002406 . + . ID=gene-CCO35_RS05340;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CCO35_RS05340;old_locus_tag=CCO35_05335 NZ_NPME01000001.1 Protein Homology CDS 1001933 1002406 . + 0 ID=cds-WP_000084477.1;Parent=gene-CCO35_RS05340;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=CCO35_RS05340;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1002564 1003442 . + . ID=gene-CCO35_RS05345;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=CCO35_RS05345;old_locus_tag=CCO35_05340 NZ_NPME01000001.1 Protein Homology CDS 1002564 1003442 . + 0 ID=cds-WP_001278615.1;Parent=gene-CCO35_RS05345;Dbxref=GenBank:WP_001278615.1;Name=WP_001278615.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=CCO35_RS05345;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278615.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1003462 1005000 . + . ID=gene-CCO35_RS05350;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=CCO35_RS05350;old_locus_tag=CCO35_05345 NZ_NPME01000001.1 Protein Homology CDS 1003462 1005000 . + 0 ID=cds-WP_024151552.1;Parent=gene-CCO35_RS05350;Dbxref=GenBank:WP_024151552.1;Name=WP_024151552.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=CCO35_RS05350;product=apolipoprotein N-acyltransferase;protein_id=WP_024151552.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1005355 1006263 . + . ID=gene-CCO35_RS05360;Name=CCO35_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05360;old_locus_tag=CCO35_05355 NZ_NPME01000001.1 Protein Homology CDS 1005355 1006263 . + 0 ID=cds-WP_001518176.1;Parent=gene-CCO35_RS05360;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=CCO35_RS05360;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1006423 1007163 . + . ID=gene-CCO35_RS05365;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=CCO35_RS05365;old_locus_tag=CCO35_05360 NZ_NPME01000001.1 Protein Homology CDS 1006423 1007163 . + 0 ID=cds-WP_000020930.1;Parent=gene-CCO35_RS05365;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=CCO35_RS05365;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1007163 1007837 . + . ID=gene-CCO35_RS05370;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=CCO35_RS05370;old_locus_tag=CCO35_05365 NZ_NPME01000001.1 Protein Homology CDS 1007163 1007837 . + 0 ID=cds-WP_000272802.1;Parent=gene-CCO35_RS05370;Dbxref=GenBank:WP_000272802.1;Name=WP_000272802.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=CCO35_RS05370;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272802.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1007837 1008562 . + . ID=gene-CCO35_RS05375;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=CCO35_RS05375;old_locus_tag=CCO35_05370 NZ_NPME01000001.1 Protein Homology CDS 1007837 1008562 . + 0 ID=cds-WP_031564225.1;Parent=gene-CCO35_RS05375;Dbxref=GenBank:WP_031564225.1;Name=WP_031564225.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=CCO35_RS05375;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_031564225.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1008679 1009614 . + . ID=gene-CCO35_RS05380;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=CCO35_RS05380;old_locus_tag=CCO35_05375 NZ_NPME01000001.1 Protein Homology CDS 1008679 1009614 . + 0 ID=cds-WP_001207417.1;Parent=gene-CCO35_RS05380;Dbxref=GenBank:WP_001207417.1;Name=WP_001207417.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=CCO35_RS05380;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207417.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1009700 1010173 . - . ID=gene-CCO35_RS05385;Name=CCO35_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05385;old_locus_tag=CCO35_05380 NZ_NPME01000001.1 Protein Homology CDS 1009700 1010173 . - 0 ID=cds-WP_001044885.1;Parent=gene-CCO35_RS05385;Dbxref=GenBank:WP_001044885.1;Name=WP_001044885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=CCO35_RS05385;product=zinc ribbon-containing protein;protein_id=WP_001044885.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1010266 1012194 . - . ID=gene-CCO35_RS05390;Name=CCO35_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05390;old_locus_tag=CCO35_05385 NZ_NPME01000001.1 Protein Homology CDS 1010266 1012194 . - 0 ID=cds-WP_001044197.1;Parent=gene-CCO35_RS05390;Dbxref=GenBank:WP_001044197.1;Name=WP_001044197.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=CCO35_RS05390;product=sigma-54 interaction domain-containing protein;protein_id=WP_001044197.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1012262 1013215 . - . ID=gene-CCO35_RS05395;Name=CCO35_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05395;old_locus_tag=CCO35_05390 NZ_NPME01000001.1 Protein Homology CDS 1012262 1013215 . - 0 ID=cds-WP_000694477.1;Parent=gene-CCO35_RS05395;Dbxref=GenBank:WP_000694477.1;Name=WP_000694477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=CCO35_RS05395;product=2-keto-3-deoxygluconate permease;protein_id=WP_000694477.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1013265 1014437 . - . ID=gene-CCO35_RS05400;Name=CCO35_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05400;old_locus_tag=CCO35_05395 NZ_NPME01000001.1 Protein Homology CDS 1013265 1014437 . - 0 ID=cds-WP_001670689.1;Parent=gene-CCO35_RS05400;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=CCO35_RS05400;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1014454 1014795 . - . ID=gene-CCO35_RS05405;Name=CCO35_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05405;old_locus_tag=CCO35_05400 NZ_NPME01000001.1 Protein Homology CDS 1014454 1014795 . - 0 ID=cds-WP_001574029.1;Parent=gene-CCO35_RS05405;Dbxref=GenBank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=CCO35_RS05405;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1015032 1017614 . + . ID=gene-CCO35_RS05410;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CCO35_RS05410;old_locus_tag=CCO35_05405 NZ_NPME01000001.1 Protein Homology CDS 1015032 1017614 . + 0 ID=cds-WP_001157912.1;Parent=gene-CCO35_RS05410;Dbxref=GenBank:WP_001157912.1;Name=WP_001157912.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=CCO35_RS05410;product=leucine--tRNA ligase;protein_id=WP_001157912.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1017629 1018219 . + . ID=gene-CCO35_RS05415;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=CCO35_RS05415;old_locus_tag=CCO35_05410 NZ_NPME01000001.1 Protein Homology CDS 1017629 1018219 . + 0 ID=cds-WP_001269950.1;Parent=gene-CCO35_RS05415;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=CCO35_RS05415;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1018219 1019250 . + . ID=gene-CCO35_RS05420;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CCO35_RS05420;old_locus_tag=CCO35_05415 NZ_NPME01000001.1 Protein Homology CDS 1018219 1019250 . + 0 ID=cds-WP_000620491.1;Parent=gene-CCO35_RS05420;Dbxref=GenBank:WP_000620491.1;Name=WP_000620491.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=CCO35_RS05420;product=DNA polymerase III subunit delta;protein_id=WP_000620491.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1019252 1019893 . + . ID=gene-CCO35_RS05425;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CCO35_RS05425;old_locus_tag=CCO35_05420 NZ_NPME01000001.1 Protein Homology CDS 1019252 1019893 . + 0 ID=cds-WP_023137128.1;Parent=gene-CCO35_RS05425;Dbxref=GenBank:WP_023137128.1;Name=WP_023137128.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=CCO35_RS05425;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_023137128.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1019868 1020962 . - . ID=gene-CCO35_RS05430;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=CCO35_RS05430;old_locus_tag=CCO35_05425 NZ_NPME01000001.1 Protein Homology CDS 1019868 1020962 . - 0 ID=cds-WP_001173261.1;Parent=gene-CCO35_RS05430;Dbxref=GenBank:WP_001173261.1;Name=WP_001173261.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=CCO35_RS05430;product=threonine-phosphate decarboxylase CobD;protein_id=WP_001173261.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1021059 1021667 . + . ID=gene-CCO35_RS05435;Name=CCO35_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05435;old_locus_tag=CCO35_05430 NZ_NPME01000001.1 Protein Homology CDS 1021059 1021667 . + 0 ID=cds-WP_001241918.1;Parent=gene-CCO35_RS05435;Dbxref=GenBank:WP_001241918.1;Name=WP_001241918.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=CCO35_RS05435;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241918.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1021995 1022312 . + . ID=gene-CCO35_RS05440;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CCO35_RS05440;old_locus_tag=CCO35_05435 NZ_NPME01000001.1 Protein Homology CDS 1021995 1022312 . + 0 ID=cds-WP_001161670.1;Parent=gene-CCO35_RS05440;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=CCO35_RS05440;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1022316 1022783 . + . ID=gene-CCO35_RS05445;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CCO35_RS05445;old_locus_tag=CCO35_05440 NZ_NPME01000001.1 Protein Homology CDS 1022316 1022783 . + 0 ID=cds-WP_000776107.1;Parent=gene-CCO35_RS05445;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=CCO35_RS05445;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1022814 1024715 . + . ID=gene-CCO35_RS05450;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO35_RS05450;old_locus_tag=CCO35_05445 NZ_NPME01000001.1 Protein Homology CDS 1022814 1024715 . + 0 ID=cds-WP_000828700.1;Parent=gene-CCO35_RS05450;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=CCO35_RS05450;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1024718 1025830 . + . ID=gene-CCO35_RS05455;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=CCO35_RS05455;old_locus_tag=CCO35_05450 NZ_NPME01000001.1 Protein Homology CDS 1024718 1025830 . + 0 ID=cds-WP_000131713.1;Parent=gene-CCO35_RS05455;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=CCO35_RS05455;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1025841 1026974 . + . ID=gene-CCO35_RS05460;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=CCO35_RS05460;old_locus_tag=CCO35_05455 NZ_NPME01000001.1 Protein Homology CDS 1025841 1026974 . + 0 ID=cds-WP_001529015.1;Parent=gene-CCO35_RS05460;Dbxref=GenBank:WP_001529015.1;Name=WP_001529015.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=CCO35_RS05460;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001529015.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1027114 1028325 . + . ID=gene-CCO35_RS05465;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=CCO35_RS05465;old_locus_tag=CCO35_05460 NZ_NPME01000001.1 Protein Homology CDS 1027114 1028325 . + 0 ID=cds-WP_000858711.1;Parent=gene-CCO35_RS05465;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=CCO35_RS05465;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1028434 1028697 . + . ID=gene-CCO35_RS05470;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=CCO35_RS05470;old_locus_tag=CCO35_05465 NZ_NPME01000001.1 Protein Homology CDS 1028434 1028697 . + 0 ID=cds-WP_000850547.1;Parent=gene-CCO35_RS05470;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=CCO35_RS05470;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1028797 1029438 . + . ID=gene-CCO35_RS05475;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=CCO35_RS05475;old_locus_tag=CCO35_05470 NZ_NPME01000001.1 Protein Homology CDS 1028797 1029438 . + 0 ID=cds-WP_000284011.1;Parent=gene-CCO35_RS05475;Dbxref=GenBank:WP_000284011.1;Name=WP_000284011.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=CCO35_RS05475;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284011.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1029740 1030693 . + . ID=gene-CCO35_RS05480;Name=CCO35_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05480;old_locus_tag=CCO35_05475 NZ_NPME01000001.1 Protein Homology CDS 1029740 1030693 . + 0 ID=cds-WP_001282817.1;Parent=gene-CCO35_RS05480;Dbxref=GenBank:WP_001282817.1;Name=WP_001282817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=CCO35_RS05480;product=YbeF family transcriptional regulator;protein_id=WP_001282817.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1030899 1031864 . + . ID=gene-CCO35_RS05485;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CCO35_RS05485;old_locus_tag=CCO35_05480 NZ_NPME01000001.1 Protein Homology CDS 1030899 1031864 . + 0 ID=cds-WP_000042640.1;Parent=gene-CCO35_RS05485;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=CCO35_RS05485;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1031950 1032153 . - . ID=gene-CCO35_RS05490;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=CCO35_RS05490;old_locus_tag=CCO35_05485 NZ_NPME01000001.1 Protein Homology CDS 1031950 1032153 . - 0 ID=cds-WP_000503938.1;Parent=gene-CCO35_RS05490;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=CCO35_RS05490;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1032282 1033070 . - . ID=gene-CCO35_RS05495;Name=CCO35_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05495;old_locus_tag=CCO35_05490 NZ_NPME01000001.1 Protein Homology CDS 1032282 1033070 . - 0 ID=cds-WP_000495793.1;Parent=gene-CCO35_RS05495;Dbxref=GenBank:WP_000495793.1;Name=WP_000495793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=CCO35_RS05495;product=deaminated glutathione amidase;protein_id=WP_000495793.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1033161 1033544 . + . ID=gene-CCO35_RS05500;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CCO35_RS05500;old_locus_tag=CCO35_05495 NZ_NPME01000001.1 Protein Homology CDS 1033161 1033544 . + 0 ID=cds-WP_000939753.1;Parent=gene-CCO35_RS05500;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=CCO35_RS05500;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1033605 1033814 . - . ID=gene-CCO35_RS05505;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO35_RS05505;old_locus_tag=CCO35_05500 NZ_NPME01000001.1 Protein Homology CDS 1033605 1033814 . - 0 ID=cds-WP_000034826.1;Parent=gene-CCO35_RS05505;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=CCO35_RS05505;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1034002 1034574 . - . ID=gene-CCO35_RS05510;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=CCO35_RS05510;old_locus_tag=CCO35_05505 NZ_NPME01000001.1 Protein Homology CDS 1034002 1034574 . - 0 ID=cds-WP_001623090.1;Parent=gene-CCO35_RS05510;Dbxref=GenBank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=CCO35_RS05510;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1034953 1036338 . + . ID=gene-CCO35_RS05520;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=CCO35_RS05520;old_locus_tag=CCO35_05515 NZ_NPME01000001.1 Protein Homology CDS 1034953 1036338 . + 0 ID=cds-WP_000958619.1;Parent=gene-CCO35_RS05520;Dbxref=GenBank:WP_000958619.1;Name=WP_000958619.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=CCO35_RS05520;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000958619.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1036392 1037072 . - . ID=gene-CCO35_RS05525;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=CCO35_RS05525;old_locus_tag=CCO35_05520 NZ_NPME01000001.1 Protein Homology CDS 1036392 1037072 . - 0 ID=cds-WP_000138778.1;Parent=gene-CCO35_RS05525;Dbxref=GenBank:WP_000138778.1;Name=WP_000138778.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=CCO35_RS05525;product=two-component response regulator DpiA;protein_id=WP_000138778.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1037041 1038702 . - . ID=gene-CCO35_RS05530;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=CCO35_RS05530;old_locus_tag=CCO35_05525 NZ_NPME01000001.1 Protein Homology CDS 1037041 1038702 . - 0 ID=cds-WP_000121807.1;Parent=gene-CCO35_RS05530;Dbxref=GenBank:WP_000121807.1;Name=WP_000121807.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=CCO35_RS05530;product=sensor histidine kinase DpiB;protein_id=WP_000121807.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1039088 1040164 . + . ID=gene-CCO35_RS05540;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO35_RS05540;old_locus_tag=CCO35_05535 NZ_NPME01000001.1 Protein Homology CDS 1039088 1040164 . + 0 ID=cds-WP_000467874.1;Parent=gene-CCO35_RS05540;Dbxref=GenBank:WP_000467874.1;Name=WP_000467874.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=CCO35_RS05540;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467874.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1040161 1040457 . + . ID=gene-CCO35_RS05545;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO35_RS05545;old_locus_tag=CCO35_05540 NZ_NPME01000001.1 Protein Homology CDS 1040161 1040457 . + 0 ID=cds-WP_000700685.1;Parent=gene-CCO35_RS05545;Dbxref=GenBank:WP_000700685.1;Name=WP_000700685.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=CCO35_RS05545;product=citrate lyase acyl carrier protein;protein_id=WP_000700685.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1040454 1041362 . + . ID=gene-CCO35_RS05550;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO35_RS05550;old_locus_tag=CCO35_05545 NZ_NPME01000001.1 Protein Homology CDS 1040454 1041362 . + 0 ID=cds-WP_000622347.1;Parent=gene-CCO35_RS05550;Dbxref=GenBank:WP_000622347.1;Name=WP_000622347.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=CCO35_RS05550;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622347.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1041372 1042901 . + . ID=gene-CCO35_RS05555;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO35_RS05555;old_locus_tag=CCO35_05550 NZ_NPME01000001.1 Protein Homology CDS 1041372 1042901 . + 0 ID=cds-WP_094965325.1;Parent=gene-CCO35_RS05555;Dbxref=GenBank:WP_094965325.1;Name=WP_094965325.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=CCO35_RS05555;product=citrate lyase subunit alpha;protein_id=WP_094965325.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1042905 1043456 . + . ID=gene-CCO35_RS05560;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO35_RS05560;old_locus_tag=CCO35_05555 NZ_NPME01000001.1 Protein Homology CDS 1042905 1043456 . + 0 ID=cds-WP_001238275.1;Parent=gene-CCO35_RS05560;Dbxref=GenBank:WP_001238275.1;Name=WP_001238275.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=CCO35_RS05560;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_001238275.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1043428 1044324 . + . ID=gene-CCO35_RS05565;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO35_RS05565;old_locus_tag=CCO35_05560 NZ_NPME01000001.1 Protein Homology CDS 1043428 1044324 . + 0 ID=cds-WP_000982668.1;Parent=gene-CCO35_RS05565;Dbxref=GenBank:WP_000982668.1;Name=WP_000982668.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=CCO35_RS05565;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982668.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1044362 1045825 . + . ID=gene-CCO35_RS05570;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=CCO35_RS05570;old_locus_tag=CCO35_05565 NZ_NPME01000001.1 Protein Homology CDS 1044362 1045825 . + 0 ID=cds-WP_000059039.1;Parent=gene-CCO35_RS05570;Dbxref=GenBank:WP_000059039.1;Name=WP_000059039.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=CCO35_RS05570;product=citrate/succinate antiporter CitT;protein_id=WP_000059039.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1045935 1046741 . + . ID=gene-CCO35_RS05575;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=CCO35_RS05575;old_locus_tag=CCO35_05570 NZ_NPME01000001.1 Protein Homology CDS 1045935 1046741 . + 0 ID=cds-WP_001092571.1;Parent=gene-CCO35_RS05575;Dbxref=GenBank:WP_001092571.1;Name=WP_001092571.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=CCO35_RS05575;product=ribonuclease I;protein_id=WP_001092571.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1046976 1047386 . + . ID=gene-CCO35_RS05585;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=CCO35_RS05585;old_locus_tag=CCO35_05580 NZ_NPME01000001.1 Protein Homology CDS 1046976 1047386 . + 0 ID=cds-WP_000089748.1;Parent=gene-CCO35_RS05585;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=CCO35_RS05585;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1047471 1048709 . - . ID=gene-CCO35_RS05590;Name=CCO35_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05590;old_locus_tag=CCO35_05585 NZ_NPME01000001.1 Protein Homology CDS 1047471 1048709 . - 0 ID=cds-WP_000646115.1;Parent=gene-CCO35_RS05590;Dbxref=GenBank:WP_000646115.1;Name=WP_000646115.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=CCO35_RS05590;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646115.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1048931 1049359 . + . ID=gene-CCO35_RS05600;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=CCO35_RS05600;old_locus_tag=CCO35_05595 NZ_NPME01000001.1 Protein Homology CDS 1048931 1049359 . + 0 ID=cds-WP_000278499.1;Parent=gene-CCO35_RS05600;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=CCO35_RS05600;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1049427 1050194 . - . ID=gene-CCO35_RS05605;Name=CCO35_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05605;old_locus_tag=CCO35_05600 NZ_NPME01000001.1 Protein Homology CDS 1049427 1050194 . - 0 ID=cds-WP_000417108.1;Parent=gene-CCO35_RS05605;Dbxref=GenBank:WP_000417108.1;Name=WP_000417108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=CCO35_RS05605;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000417108.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1050194 1050751 . - . ID=gene-CCO35_RS05610;Name=CCO35_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05610;old_locus_tag=CCO35_05605 NZ_NPME01000001.1 Protein Homology CDS 1050194 1050751 . - 0 ID=cds-WP_001250387.1;Parent=gene-CCO35_RS05610;Dbxref=GenBank:WP_001250387.1;Name=WP_001250387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=CCO35_RS05610;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250387.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1050748 1053027 . - . ID=gene-CCO35_RS05615;Name=CCO35_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05615;old_locus_tag=CCO35_05610 NZ_NPME01000001.1 Protein Homology CDS 1050748 1053027 . - 0 ID=cds-WP_031564294.1;Parent=gene-CCO35_RS05615;Dbxref=GenBank:WP_031564294.1;Name=WP_031564294.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=CCO35_RS05615;product=molybdopterin-dependent oxidoreductase;protein_id=WP_031564294.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1053020 1053580 . - . ID=gene-CCO35_RS05620;Name=CCO35_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05620;old_locus_tag=CCO35_05615 NZ_NPME01000001.1 Protein Homology CDS 1053020 1053580 . - 0 ID=cds-WP_000377437.1;Parent=gene-CCO35_RS05620;Dbxref=GenBank:WP_000377437.1;Name=WP_000377437.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=CCO35_RS05620;product=TorD/DmsD family molecular chaperone;protein_id=WP_000377437.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1053913 1055478 . - . ID=gene-CCO35_RS05625;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CCO35_RS05625;old_locus_tag=CCO35_05620 NZ_NPME01000001.1 Protein Homology CDS 1053913 1055478 . - 0 ID=cds-WP_000887644.1;Parent=gene-CCO35_RS05625;Dbxref=GenBank:WP_000887644.1;Name=WP_000887644.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=CCO35_RS05625;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887644.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1055720 1056283 . - . ID=gene-CCO35_RS05630;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CCO35_RS05630;old_locus_tag=CCO35_05625 NZ_NPME01000001.1 Protein Homology CDS 1055720 1056283 . - 0 ID=cds-WP_000052802.1;Parent=gene-CCO35_RS05630;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=CCO35_RS05630;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1056724 1057470 . + . ID=gene-CCO35_RS05635;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=CCO35_RS05635;old_locus_tag=CCO35_05630 NZ_NPME01000001.1 Protein Homology CDS 1056724 1057470 . + 0 ID=cds-WP_000597129.1;Parent=gene-CCO35_RS05635;Dbxref=GenBank:WP_000597129.1;Name=WP_000597129.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=CCO35_RS05635;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000597129.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1057787 1058692 . + . ID=gene-CCO35_RS05645;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;locus_tag=CCO35_RS05645;old_locus_tag=CCO35_05640 NZ_NPME01000001.1 Protein Homology CDS 1057787 1058692 . + 0 ID=cds-WP_000002491.1;Parent=gene-CCO35_RS05645;Dbxref=GenBank:WP_000002491.1;Name=WP_000002491.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000002494.1;locus_tag=CCO35_RS05645;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002491.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1058855 1060090 . + . ID=gene-CCO35_RS05650;Name=CCO35_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05650;old_locus_tag=CCO35_05645 NZ_NPME01000001.1 Protein Homology CDS 1058855 1060090 . + 0 ID=cds-WP_000118134.1;Parent=gene-CCO35_RS05650;Dbxref=GenBank:WP_000118134.1;Name=WP_000118134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=CCO35_RS05650;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118134.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1060063 1060680 . + . ID=gene-CCO35_RS05655;Name=CCO35_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05655;old_locus_tag=CCO35_05650 NZ_NPME01000001.1 Protein Homology CDS 1060063 1060680 . + 0 ID=cds-WP_001164754.1;Parent=gene-CCO35_RS05655;Dbxref=GenBank:WP_001164754.1;Name=WP_001164754.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=CCO35_RS05655;product=IbrB-like domain-containing protein;protein_id=WP_001164754.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1060681 1061841 . - . ID=gene-CCO35_RS05660;Name=CCO35_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05660;old_locus_tag=CCO35_05655 NZ_NPME01000001.1 Protein Homology CDS 1060681 1061841 . - 0 ID=cds-WP_001245601.1;Parent=gene-CCO35_RS05660;Dbxref=GenBank:WP_001245601.1;Name=WP_001245601.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=CCO35_RS05660;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_001245601.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1061968 1063056 . + . ID=gene-CCO35_RS05665;Name=CCO35_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05665;old_locus_tag=CCO35_05660 NZ_NPME01000001.1 Protein Homology CDS 1061968 1063056 . + 0 ID=cds-WP_001016871.1;Parent=gene-CCO35_RS05665;Dbxref=GenBank:WP_001016871.1;Name=WP_001016871.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=CCO35_RS05665;product=oxidoreductase;protein_id=WP_001016871.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1063092 1063289 . - . ID=gene-CCO35_RS05670;Name=CCO35_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05670;old_locus_tag=CCO35_05665 NZ_NPME01000001.1 Protein Homology CDS 1063092 1063289 . - 0 ID=cds-WP_000460619.1;Parent=gene-CCO35_RS05670;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=CCO35_RS05670;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1063353 1065458 . - . ID=gene-CCO35_RS05675;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=CCO35_RS05675;old_locus_tag=CCO35_05670 NZ_NPME01000001.1 Protein Homology CDS 1063353 1065458 . - 0 ID=cds-WP_001043107.1;Parent=gene-CCO35_RS05675;Dbxref=GenBank:WP_001043107.1;Name=WP_001043107.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=CCO35_RS05675;product=pyruvate/proton symporter CstA;protein_id=WP_001043107.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1065640 1066053 . - . ID=gene-CCO35_RS05680;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=CCO35_RS05680;old_locus_tag=CCO35_05675 NZ_NPME01000001.1 Protein Homology CDS 1065640 1066053 . - 0 ID=cds-WP_000637966.1;Parent=gene-CCO35_RS05680;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=CCO35_RS05680;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1066056 1066811 . - . ID=gene-CCO35_RS05685;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=CCO35_RS05685;old_locus_tag=CCO35_05680 NZ_NPME01000001.1 Protein Homology CDS 1066056 1066811 . - 0 ID=cds-WP_023137410.1;Parent=gene-CCO35_RS05685;Dbxref=GenBank:WP_023137410.1;Name=WP_023137410.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=CCO35_RS05685;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_023137410.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1066811 1067668 . - . ID=gene-CCO35_RS05690;Name=CCO35_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05690;old_locus_tag=CCO35_05685 NZ_NPME01000001.1 Protein Homology CDS 1066811 1067668 . - 0 ID=cds-WP_001007166.1;Parent=gene-CCO35_RS05690;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=CCO35_RS05690;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1067682 1069292 . - . ID=gene-CCO35_RS05695;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=CCO35_RS05695;old_locus_tag=CCO35_05690 NZ_NPME01000001.1 Protein Homology CDS 1067682 1069292 . - 0 ID=cds-WP_001222461.1;Parent=gene-CCO35_RS05695;Dbxref=GenBank:WP_001222461.1;Name=WP_001222461.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=CCO35_RS05695;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_001222461.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1069302 1070477 . - . ID=gene-CCO35_RS05700;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=CCO35_RS05700;old_locus_tag=CCO35_05695 NZ_NPME01000001.1 Protein Homology CDS 1069302 1070477 . - 0 ID=cds-WP_000367597.1;Parent=gene-CCO35_RS05700;Dbxref=GenBank:WP_000367597.1;Name=WP_000367597.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=CCO35_RS05700;product=isochorismate synthase EntC;protein_id=WP_000367597.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1070786 1071742 . + . ID=gene-CCO35_RS05705;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=CCO35_RS05705;old_locus_tag=CCO35_05700 NZ_NPME01000001.1 Protein Homology CDS 1070786 1071742 . + 0 ID=cds-WP_023225744.1;Parent=gene-CCO35_RS05705;Dbxref=GenBank:WP_023225744.1;Name=WP_023225744.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=CCO35_RS05705;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_023225744.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1071805 1073049 . - . ID=gene-CCO35_RS05710;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=CCO35_RS05710;old_locus_tag=CCO35_05705 NZ_NPME01000001.1 Protein Homology CDS 1071805 1073049 . - 0 ID=cds-WP_001081661.1;Parent=gene-CCO35_RS05710;Dbxref=GenBank:WP_001081661.1;Name=WP_001081661.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=CCO35_RS05710;product=enterobactin transporter EntS;protein_id=WP_001081661.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1073160 1074167 . + . ID=gene-CCO35_RS05715;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=CCO35_RS05715;old_locus_tag=CCO35_05710 NZ_NPME01000001.1 Protein Homology CDS 1073160 1074167 . + 0 ID=cds-WP_001277869.1;Parent=gene-CCO35_RS05715;Dbxref=GenBank:WP_001277869.1;Name=WP_001277869.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=CCO35_RS05715;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277869.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1074167 1075156 . + . ID=gene-CCO35_RS05720;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=CCO35_RS05720;old_locus_tag=CCO35_05715 NZ_NPME01000001.1 Protein Homology CDS 1074167 1075156 . + 0 ID=cds-WP_000480064.1;Parent=gene-CCO35_RS05720;Dbxref=GenBank:WP_000480064.1;Name=WP_000480064.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=CCO35_RS05720;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480064.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1075153 1075947 . + . ID=gene-CCO35_RS05725;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=CCO35_RS05725;old_locus_tag=CCO35_05720 NZ_NPME01000001.1 Protein Homology CDS 1075153 1075947 . + 0 ID=cds-WP_000140622.1;Parent=gene-CCO35_RS05725;Dbxref=GenBank:WP_000140622.1;Name=WP_000140622.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=CCO35_RS05725;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140622.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1076001 1077137 . - . ID=gene-CCO35_RS05730;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=CCO35_RS05730;old_locus_tag=CCO35_05725 NZ_NPME01000001.1 Protein Homology CDS 1076001 1077137 . - 0 ID=cds-WP_031564332.1;Parent=gene-CCO35_RS05730;Dbxref=GenBank:WP_031564332.1;Name=WP_031564332.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=CCO35_RS05730;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_031564332.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1077387 1081271 . - . ID=gene-CCO35_RS05735;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=CCO35_RS05735;old_locus_tag=CCO35_05730 NZ_NPME01000001.1 Protein Homology CDS 1077387 1081271 . - 0 ID=cds-WP_031564336.1;Parent=gene-CCO35_RS05735;Dbxref=GenBank:WP_031564336.1;Name=WP_031564336.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=CCO35_RS05735;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_031564336.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1081268 1081486 . - . ID=gene-CCO35_RS05740;Name=CCO35_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05740;old_locus_tag=CCO35_05735 NZ_NPME01000001.1 Protein Homology CDS 1081268 1081486 . - 0 ID=cds-WP_000396015.1;Parent=gene-CCO35_RS05740;Dbxref=GenBank:WP_000396015.1;Name=WP_000396015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=CCO35_RS05740;product=MbtH family protein;protein_id=WP_000396015.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1081517 1082731 . - . ID=gene-CCO35_RS05745;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=CCO35_RS05745;old_locus_tag=CCO35_05740 NZ_NPME01000001.1 Protein Homology CDS 1081517 1082731 . - 0 ID=cds-WP_000656588.1;Parent=gene-CCO35_RS05745;Dbxref=GenBank:WP_000656588.1;Name=WP_000656588.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=CCO35_RS05745;product=enterochelin esterase;protein_id=WP_000656588.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1082920 1085175 . + . ID=gene-CCO35_RS05750;Name=CCO35_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05750;old_locus_tag=CCO35_05745 NZ_NPME01000001.1 Protein Homology CDS 1082920 1085175 . + 0 ID=cds-WP_001034969.1;Parent=gene-CCO35_RS05750;Dbxref=GenBank:WP_001034969.1;Name=WP_001034969.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=CCO35_RS05750;product=TonB-dependent siderophore receptor;protein_id=WP_001034969.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1085223 1085927 . + . ID=gene-CCO35_RS05755;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=CCO35_RS05755;old_locus_tag=CCO35_05750 NZ_NPME01000001.1 Protein Homology CDS 1085223 1085927 . + 0 ID=cds-WP_001260562.1;Parent=gene-CCO35_RS05755;Dbxref=GenBank:WP_001260562.1;Name=WP_001260562.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=CCO35_RS05755;product=enterobactin synthase subunit EntD;protein_id=WP_001260562.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1085939 1087057 . + . ID=gene-CCO35_RS05760;Name=CCO35_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05760;old_locus_tag=CCO35_05755 NZ_NPME01000001.1 Protein Homology CDS 1085939 1087057 . + 0 ID=cds-WP_000174090.1;Parent=gene-CCO35_RS05760;Dbxref=GenBank:WP_000174090.1;Name=WP_000174090.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=CCO35_RS05760;product=YbdK family carboxylate-amine ligase;protein_id=WP_000174090.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1087124 1087372 . + . ID=gene-CCO35_RS05765;Name=CCO35_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05765;old_locus_tag=CCO35_05760 NZ_NPME01000001.1 Protein Homology CDS 1087124 1087372 . + 0 ID=cds-WP_000682498.1;Parent=gene-CCO35_RS05765;Dbxref=GenBank:WP_000682498.1;Name=WP_000682498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=CCO35_RS05765;product=DUF1158 family protein;protein_id=WP_000682498.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1087378 1087719 . - . ID=gene-CCO35_RS05770;Name=CCO35_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05770;old_locus_tag=CCO35_05765 NZ_NPME01000001.1 Protein Homology CDS 1087378 1087719 . - 0 ID=cds-WP_000155635.1;Parent=gene-CCO35_RS05770;Dbxref=GenBank:WP_000155635.1;Name=WP_000155635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=CCO35_RS05770;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155635.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1088008 1088589 . + . ID=gene-CCO35_RS05775;Name=CCO35_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05775;old_locus_tag=CCO35_05770 NZ_NPME01000001.1 Protein Homology CDS 1088008 1088589 . + 0 ID=cds-WP_000113609.1;Parent=gene-CCO35_RS05775;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=CCO35_RS05775;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1088589 1088957 . + . ID=gene-CCO35_RS05780;Name=CCO35_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05780;old_locus_tag=CCO35_05775 NZ_NPME01000001.1 Protein Homology CDS 1088589 1088957 . + 0 ID=cds-WP_000348989.1;Parent=gene-CCO35_RS05780;Dbxref=GenBank:WP_000348989.1;Name=WP_000348989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=CCO35_RS05780;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348989.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1089054 1089707 . + . ID=gene-CCO35_RS05785;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=CCO35_RS05785;old_locus_tag=CCO35_05780 NZ_NPME01000001.1 Protein Homology CDS 1089054 1089707 . + 0 ID=cds-WP_000355868.1;Parent=gene-CCO35_RS05785;Dbxref=GenBank:WP_000355868.1;Name=WP_000355868.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=CCO35_RS05785;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000355868.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1089974 1091944 . - . ID=gene-CCO35_RS05790;Name=CCO35_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05790;old_locus_tag=CCO35_05785 NZ_NPME01000001.1 Protein Homology CDS 1089974 1091944 . - 0 ID=cds-WP_023197012.1;Parent=gene-CCO35_RS05790;Dbxref=GenBank:WP_023197012.1;Name=WP_023197012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=CCO35_RS05790;product=autotransporter domain-containing esterase;protein_id=WP_023197012.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1092255 1093502 . + . ID=gene-CCO35_RS05800;Name=CCO35_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05800;old_locus_tag=CCO35_05795 NZ_NPME01000001.1 Protein Homology CDS 1092255 1093502 . + 0 ID=cds-WP_001156971.1;Parent=gene-CCO35_RS05800;Dbxref=GenBank:WP_001156971.1;Name=WP_001156971.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=CCO35_RS05800;product=mechanosensitive ion channel family protein;protein_id=WP_001156971.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1093544 1094938 . - . ID=gene-CCO35_RS05805;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=CCO35_RS05805;old_locus_tag=CCO35_05800 NZ_NPME01000001.1 Protein Homology CDS 1093544 1094938 . - 0 ID=cds-WP_000786291.1;Parent=gene-CCO35_RS05805;Dbxref=GenBank:WP_000786291.1;Name=WP_000786291.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=CCO35_RS05805;product=phenylalanine transporter;protein_id=WP_000786291.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1095264 1096439 . + . ID=gene-CCO35_RS05810;Name=CCO35_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05810;old_locus_tag=CCO35_05805 NZ_NPME01000001.1 Protein Homology CDS 1095264 1096439 . + 0 ID=cds-WP_001033453.1;Parent=gene-CCO35_RS05810;Dbxref=GenBank:WP_001033453.1;Name=WP_001033453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=CCO35_RS05810;product=DnaJ family molecular chaperone;protein_id=WP_001033453.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1096518 1097078 . - . ID=gene-CCO35_RS05815;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=CCO35_RS05815;old_locus_tag=CCO35_05810 NZ_NPME01000001.1 Protein Homology CDS 1096518 1097078 . - 0 ID=cds-WP_000362177.1;Parent=gene-CCO35_RS05815;Dbxref=GenBank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=CCO35_RS05815;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362177.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1097091 1097327 . - . ID=gene-CCO35_RS05820;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=CCO35_RS05820;old_locus_tag=CCO35_05815 NZ_NPME01000001.1 Protein Homology CDS 1097091 1097327 . - 0 ID=cds-WP_000922170.1;Parent=gene-CCO35_RS05820;Dbxref=GenBank:WP_000922170.1;Name=WP_000922170.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=CCO35_RS05820;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922170.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1097484 1098809 . - . ID=gene-CCO35_RS05825;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=CCO35_RS05825;old_locus_tag=CCO35_05820 NZ_NPME01000001.1 Protein Homology CDS 1097484 1098809 . - 0 ID=cds-WP_000195934.1;Parent=gene-CCO35_RS05825;Dbxref=GenBank:WP_000195934.1;Name=WP_000195934.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=CCO35_RS05825;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_000195934.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1099025 1099879 . + . ID=gene-CCO35_RS05830;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=CCO35_RS05830;old_locus_tag=CCO35_05825 NZ_NPME01000001.1 Protein Homology CDS 1099025 1099879 . + 0 ID=cds-WP_000339628.1;Parent=gene-CCO35_RS05830;Dbxref=GenBank:WP_000339628.1;Name=WP_000339628.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=CCO35_RS05830;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339628.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1099930 1100031 . - . ID=gene-CCO35_RS05835;Name=CCO35_RS05835;end_range=1100031,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS05835;old_locus_tag=CCO35_05830;partial=true;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 1099930 1100031 . - 0 ID=cds-CCO35_RS05835;Parent=gene-CCO35_RS05835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1100031,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=CCO35_RS05835;partial=true;product=cation transporter;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1100396 1100472 . - . ID=gene-CCO35_RS05845;Name=CCO35_RS05845;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS05845;old_locus_tag=CCO35_05840 NZ_NPME01000001.1 tRNAscan-SE tRNA 1100396 1100472 . - . ID=rna-CCO35_RS05845;Parent=gene-CCO35_RS05845;anticodon=(pos:complement(1100436..1100438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05845;product=tRNA-Arg NZ_NPME01000001.1 tRNAscan-SE exon 1100396 1100472 . - . ID=exon-CCO35_RS05845-1;Parent=rna-CCO35_RS05845;anticodon=(pos:complement(1100436..1100438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS05845;product=tRNA-Arg NZ_NPME01000001.1 RefSeq gene 1100727 1101323 . + . ID=gene-CCO35_RS05855;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=CCO35_RS05855;old_locus_tag=CCO35_05850 NZ_NPME01000001.1 Protein Homology CDS 1100727 1101323 . + 0 ID=cds-WP_000948629.1;Parent=gene-CCO35_RS05855;Dbxref=GenBank:WP_000948629.1;Name=WP_000948629.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=CCO35_RS05855;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_000948629.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1101485 1101796 . + . ID=gene-CCO35_RS05860;Name=CCO35_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05860;old_locus_tag=CCO35_05855 NZ_NPME01000001.1 Protein Homology CDS 1101485 1101796 . + 0 ID=cds-WP_000226498.1;Parent=gene-CCO35_RS05860;Dbxref=GenBank:WP_000226498.1;Name=WP_000226498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=CCO35_RS05860;product=hypothetical protein;protein_id=WP_000226498.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1101815 1102537 . + . ID=gene-CCO35_RS05865;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=CCO35_RS05865;old_locus_tag=CCO35_05860 NZ_NPME01000001.1 Protein Homology CDS 1101815 1102537 . + 0 ID=cds-WP_001258113.1;Parent=gene-CCO35_RS05865;Dbxref=GenBank:WP_001258113.1;Name=WP_001258113.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=CCO35_RS05865;product=fimbria biosynthesis regulator FimY;protein_id=WP_001258113.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1103141 1103773 . + . ID=gene-CCO35_RS05870;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=CCO35_RS05870;old_locus_tag=CCO35_05865 NZ_NPME01000001.1 Protein Homology CDS 1103141 1103773 . + 0 ID=cds-WP_000801271.1;Parent=gene-CCO35_RS05870;Dbxref=GenBank:WP_000801271.1;Name=WP_000801271.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=CCO35_RS05870;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801271.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1103819 1104337 . - . ID=gene-CCO35_RS05875;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=CCO35_RS05875;old_locus_tag=CCO35_05870 NZ_NPME01000001.1 Protein Homology CDS 1103819 1104337 . - 0 ID=cds-WP_000603409.1;Parent=gene-CCO35_RS05875;Dbxref=GenBank:WP_000603409.1;Name=WP_000603409.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=CCO35_RS05875;product=fimbria assembly protein;protein_id=WP_000603409.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1104347 1105354 . - . ID=gene-CCO35_RS05880;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=CCO35_RS05880;old_locus_tag=CCO35_05875 NZ_NPME01000001.1 Protein Homology CDS 1104347 1105354 . - 0 ID=cds-WP_000708678.1;Parent=gene-CCO35_RS05880;Dbxref=GenBank:WP_000708678.1;Name=WP_000708678.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=CCO35_RS05880;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000708678.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1105369 1107981 . - . ID=gene-CCO35_RS05885;Name=CCO35_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05885;old_locus_tag=CCO35_05880 NZ_NPME01000001.1 Protein Homology CDS 1105369 1107981 . - 0 ID=cds-WP_000754240.1;Parent=gene-CCO35_RS05885;Dbxref=GenBank:WP_000754240.1;Name=WP_000754240.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=CCO35_RS05885;product=fimbrial biogenesis usher protein;protein_id=WP_000754240.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1108012 1108704 . - . ID=gene-CCO35_RS05890;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=CCO35_RS05890;old_locus_tag=CCO35_05885 NZ_NPME01000001.1 Protein Homology CDS 1108012 1108704 . - 0 ID=cds-WP_001519112.1;Parent=gene-CCO35_RS05890;Dbxref=GenBank:WP_001519112.1;Name=WP_001519112.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=CCO35_RS05890;product=type 1 fimbria chaperone FimC;protein_id=WP_001519112.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1108748 1109281 . - . ID=gene-CCO35_RS05895;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=CCO35_RS05895;old_locus_tag=CCO35_05890 NZ_NPME01000001.1 Protein Homology CDS 1108748 1109281 . - 0 ID=cds-WP_000619614.1;Parent=gene-CCO35_RS05895;Dbxref=GenBank:WP_000619614.1;Name=WP_000619614.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=CCO35_RS05895;product=type 1 fimbrial protein subunit FimI;protein_id=WP_000619614.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1109356 1109913 . - . ID=gene-CCO35_RS05900;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=CCO35_RS05900;old_locus_tag=CCO35_05895 NZ_NPME01000001.1 Protein Homology CDS 1109356 1109913 . - 0 ID=cds-WP_000681026.1;Parent=gene-CCO35_RS05900;Dbxref=GenBank:WP_000681026.1;Name=WP_000681026.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=CCO35_RS05900;product=type 1 fimbrial protein subunit FimA;protein_id=WP_000681026.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1110460 1111326 . + . ID=gene-CCO35_RS05910;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CCO35_RS05910;old_locus_tag=CCO35_05905 NZ_NPME01000001.1 Protein Homology CDS 1110460 1111326 . + 0 ID=cds-WP_000729165.1;Parent=gene-CCO35_RS05910;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=CCO35_RS05910;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1111328 1111540 . + . ID=gene-CCO35_RS05915;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=CCO35_RS05915;old_locus_tag=CCO35_05910 NZ_NPME01000001.1 Protein Homology CDS 1111328 1111540 . + 0 ID=cds-WP_000190278.1;Parent=gene-CCO35_RS05915;Dbxref=GenBank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=CCO35_RS05915;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1111668 1112213 . + . ID=gene-CCO35_RS05920;Name=CCO35_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05920;old_locus_tag=CCO35_05915 NZ_NPME01000001.1 Protein Homology CDS 1111668 1112213 . + 0 ID=cds-WP_001143505.1;Parent=gene-CCO35_RS05920;Dbxref=GenBank:WP_001143505.1;Name=WP_001143505.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=CCO35_RS05920;product=metal-dependent hydrolase;protein_id=WP_001143505.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1112206 1112643 . + . ID=gene-CCO35_RS05925;Name=CCO35_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05925;old_locus_tag=CCO35_05920 NZ_NPME01000001.1 Protein Homology CDS 1112206 1112643 . + 0 ID=cds-WP_001038577.1;Parent=gene-CCO35_RS05925;Dbxref=GenBank:WP_001038577.1;Name=WP_001038577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=CCO35_RS05925;product=STM0539 family protein;protein_id=WP_001038577.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1112640 1113464 . + . ID=gene-CCO35_RS05930;Name=CCO35_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05930;old_locus_tag=CCO35_05925 NZ_NPME01000001.1 Protein Homology CDS 1112640 1113464 . + 0 ID=cds-WP_000818110.1;Parent=gene-CCO35_RS05930;Dbxref=GenBank:WP_000818110.1;Name=WP_000818110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=CCO35_RS05930;product=DUF2145 domain-containing protein;protein_id=WP_000818110.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1113509 1114894 . - . ID=gene-CCO35_RS05935;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CCO35_RS05935;old_locus_tag=CCO35_05930 NZ_NPME01000001.1 Protein Homology CDS 1113509 1114894 . - 0 ID=cds-WP_000912377.1;Parent=gene-CCO35_RS05935;Dbxref=GenBank:WP_000912377.1;Name=WP_000912377.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=CCO35_RS05935;product=cysteine--tRNA ligase;protein_id=WP_000912377.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1115067 1115561 . + . ID=gene-CCO35_RS05940;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=CCO35_RS05940;old_locus_tag=CCO35_05935 NZ_NPME01000001.1 Protein Homology CDS 1115067 1115561 . + 0 ID=cds-WP_000255991.1;Parent=gene-CCO35_RS05940;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=CCO35_RS05940;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1115564 1116286 . + . ID=gene-CCO35_RS05945;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=CCO35_RS05945;old_locus_tag=CCO35_05940 NZ_NPME01000001.1 Protein Homology CDS 1115564 1116286 . + 0 ID=cds-WP_001603020.1;Parent=gene-CCO35_RS05945;Dbxref=GenBank:WP_001603020.1;Name=WP_001603020.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=CCO35_RS05945;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_001603020.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1116404 1116913 . + . ID=gene-CCO35_RS05955;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CCO35_RS05955;old_locus_tag=CCO35_05950 NZ_NPME01000001.1 Protein Homology CDS 1116404 1116913 . + 0 ID=cds-WP_000098736.1;Parent=gene-CCO35_RS05955;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=CCO35_RS05955;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1116910 1117977 . + . ID=gene-CCO35_RS05960;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CCO35_RS05960;old_locus_tag=CCO35_05955 NZ_NPME01000001.1 Protein Homology CDS 1116910 1117977 . + 0 ID=cds-WP_031564395.1;Parent=gene-CCO35_RS05960;Dbxref=GenBank:WP_031564395.1;Name=WP_031564395.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=CCO35_RS05960;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_031564395.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1118073 1119158 . + . ID=gene-CCO35_RS05965;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=CCO35_RS05965;old_locus_tag=CCO35_05960 NZ_NPME01000001.1 Protein Homology CDS 1118073 1119158 . + 0 ID=cds-WP_000997740.1;Parent=gene-CCO35_RS05965;Dbxref=GenBank:WP_000997740.1;Name=WP_000997740.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997743.1;locus_tag=CCO35_RS05965;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_000997740.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1119197 1119856 . - . ID=gene-CCO35_RS05970;Name=CCO35_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05970;old_locus_tag=CCO35_05965 NZ_NPME01000001.1 Protein Homology CDS 1119197 1119856 . - 0 ID=cds-WP_000342247.1;Parent=gene-CCO35_RS05970;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=CCO35_RS05970;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1119849 1120865 . - . ID=gene-CCO35_RS05975;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=CCO35_RS05975;old_locus_tag=CCO35_05970 NZ_NPME01000001.1 Protein Homology CDS 1119849 1120865 . - 0 ID=cds-WP_000569660.1;Parent=gene-CCO35_RS05975;Dbxref=GenBank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=CCO35_RS05975;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1120902 1121732 . - . ID=gene-CCO35_RS05980;Name=CCO35_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05980;old_locus_tag=CCO35_05975 NZ_NPME01000001.1 Protein Homology CDS 1120902 1121732 . - 0 ID=cds-WP_000524317.1;Parent=gene-CCO35_RS05980;Dbxref=GenBank:WP_000524317.1;Name=WP_000524317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=CCO35_RS05980;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000524317.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1121989 1123122 . - . ID=gene-CCO35_RS05985;Name=CCO35_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS05985;old_locus_tag=CCO35_05980 NZ_NPME01000001.1 Protein Homology CDS 1121989 1123122 . - 0 ID=cds-WP_000152866.1;Parent=gene-CCO35_RS05985;Dbxref=GenBank:WP_000152866.1;Name=WP_000152866.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=CCO35_RS05985;product=porin;protein_id=WP_000152866.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1123308 1125722 . - . ID=gene-CCO35_RS05990;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=CCO35_RS05990;old_locus_tag=CCO35_05985 NZ_NPME01000001.1 Protein Homology CDS 1123308 1125722 . - 0 ID=cds-WP_000561766.1;Parent=gene-CCO35_RS05990;Dbxref=GenBank:WP_000561766.1;Name=WP_000561766.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=CCO35_RS05990;product=putative ABC transporter permease subunit YbbP;protein_id=WP_000561766.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1125719 1126405 . - . ID=gene-CCO35_RS05995;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=CCO35_RS05995;old_locus_tag=CCO35_05990 NZ_NPME01000001.1 Protein Homology CDS 1125719 1126405 . - 0 ID=cds-WP_031564408.1;Parent=gene-CCO35_RS05995;Dbxref=GenBank:WP_031564408.1;Name=WP_031564408.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=CCO35_RS05995;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_031564408.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1126376 1126990 . + . ID=gene-CCO35_RS06000;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=CCO35_RS06000;old_locus_tag=CCO35_05995 NZ_NPME01000001.1 Protein Homology CDS 1126376 1126990 . + 0 ID=cds-WP_001010574.1;Parent=gene-CCO35_RS06000;Dbxref=GenBank:WP_001010574.1;Name=WP_001010574.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=CCO35_RS06000;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010574.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1127145 1127915 . + . ID=gene-CCO35_RS06005;Name=CCO35_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06005;old_locus_tag=CCO35_06000 NZ_NPME01000001.1 Protein Homology CDS 1127145 1127915 . + 0 ID=cds-WP_001172804.1;Parent=gene-CCO35_RS06005;Dbxref=GenBank:WP_001172804.1;Name=WP_001172804.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=CCO35_RS06005;product=SDR family oxidoreductase;protein_id=WP_001172804.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1127975 1128829 . + . ID=gene-CCO35_RS06010;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=CCO35_RS06010;old_locus_tag=CCO35_06005 NZ_NPME01000001.1 Protein Homology CDS 1127975 1128829 . + 0 ID=cds-WP_031564412.1;Parent=gene-CCO35_RS06010;Dbxref=GenBank:WP_031564412.1;Name=WP_031564412.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=CCO35_RS06010;product=chaperedoxin;protein_id=WP_031564412.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1128915 1129694 . - . ID=gene-CCO35_RS06015;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=CCO35_RS06015;old_locus_tag=CCO35_06010 NZ_NPME01000001.1 Protein Homology CDS 1128915 1129694 . - 0 ID=cds-WP_001002130.1;Parent=gene-CCO35_RS06015;Dbxref=GenBank:WP_001002130.1;Name=WP_001002130.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=CCO35_RS06015;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1129681 1130358 . - . ID=gene-CCO35_RS06020;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=CCO35_RS06020;old_locus_tag=CCO35_06015 NZ_NPME01000001.1 Protein Homology CDS 1129681 1130358 . - 0 ID=cds-WP_000140195.1;Parent=gene-CCO35_RS06020;Dbxref=GenBank:WP_000140195.1;Name=WP_000140195.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=CCO35_RS06020;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_000140195.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1130505 1131422 . + . ID=gene-CCO35_RS06025;Name=CCO35_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06025;old_locus_tag=CCO35_06020 NZ_NPME01000001.1 Protein Homology CDS 1130505 1131422 . + 0 ID=cds-WP_000906146.1;Parent=gene-CCO35_RS06025;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=CCO35_RS06025;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1131419 1131871 . + . ID=gene-CCO35_RS06030;Name=CCO35_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06030;old_locus_tag=CCO35_06025 NZ_NPME01000001.1 Protein Homology CDS 1131419 1131871 . + 0 ID=cds-WP_000561177.1;Parent=gene-CCO35_RS06030;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=CCO35_RS06030;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1131872 1132288 . - . ID=gene-CCO35_RS06035;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=CCO35_RS06035;old_locus_tag=CCO35_06030 NZ_NPME01000001.1 Protein Homology CDS 1131872 1132288 . - 0 ID=cds-WP_001026760.1;Parent=gene-CCO35_RS06035;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=CCO35_RS06035;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1132398 1134899 . + . ID=gene-CCO35_RS06040;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=CCO35_RS06040;old_locus_tag=CCO35_06035 NZ_NPME01000001.1 Protein Homology CDS 1132398 1134899 . + 0 ID=cds-WP_000083913.1;Parent=gene-CCO35_RS06040;Dbxref=GenBank:WP_000083913.1;Name=WP_000083913.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=CCO35_RS06040;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083913.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1135052 1135879 . + . ID=gene-CCO35_RS06045;Name=CCO35_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06045;old_locus_tag=CCO35_06040 NZ_NPME01000001.1 Protein Homology CDS 1135052 1135879 . + 0 ID=cds-WP_000488532.1;Parent=gene-CCO35_RS06045;Dbxref=GenBank:WP_000488532.1;Name=WP_000488532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=CCO35_RS06045;product=lysozyme inhibitor LprI family protein;protein_id=WP_000488532.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1135965 1136759 . + . ID=gene-CCO35_RS06050;Name=CCO35_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06050;old_locus_tag=CCO35_06045 NZ_NPME01000001.1 Protein Homology CDS 1135965 1136759 . + 0 ID=cds-WP_000421865.1;Parent=gene-CCO35_RS06050;Dbxref=GenBank:WP_000421865.1;Name=WP_000421865.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=CCO35_RS06050;product=TraB/GumN family protein;protein_id=WP_000421865.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1136961 1137440 . + . ID=gene-CCO35_RS06055;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CCO35_RS06055;old_locus_tag=CCO35_06050 NZ_NPME01000001.1 Protein Homology CDS 1136961 1137440 . + 0 ID=cds-WP_000186618.1;Parent=gene-CCO35_RS06055;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=CCO35_RS06055;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1137557 1139209 . - . ID=gene-CCO35_RS06060;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=CCO35_RS06060;old_locus_tag=CCO35_06055 NZ_NPME01000001.1 Protein Homology CDS 1137557 1139209 . - 0 ID=cds-WP_000670402.1;Parent=gene-CCO35_RS06060;Dbxref=GenBank:WP_000670402.1;Name=WP_000670402.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=CCO35_RS06060;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670402.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1139382 1140602 . + . ID=gene-CCO35_RS06065;Name=CCO35_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06065;old_locus_tag=CCO35_06060 NZ_NPME01000001.1 Protein Homology CDS 1139382 1140602 . + 0 ID=cds-WP_001251593.1;Parent=gene-CCO35_RS06065;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=CCO35_RS06065;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1140817 1142493 . + . ID=gene-CCO35_RS06070;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=CCO35_RS06070;old_locus_tag=CCO35_06065 NZ_NPME01000001.1 Protein Homology CDS 1140817 1142493 . + 0 ID=cds-WP_000546209.1;Parent=gene-CCO35_RS06070;Dbxref=GenBank:WP_000546209.1;Name=WP_000546209.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=CCO35_RS06070;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546209.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1142542 1143846 . - . ID=gene-CCO35_RS06075;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=CCO35_RS06075;old_locus_tag=CCO35_06070 NZ_NPME01000001.1 Protein Homology CDS 1142542 1143846 . - 0 ID=cds-WP_000671593.1;Parent=gene-CCO35_RS06075;Dbxref=GenBank:WP_000671593.1;Name=WP_000671593.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=CCO35_RS06075;product=inosine/guanosine kinase;protein_id=WP_000671593.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1143999 1144970 . + . ID=gene-CCO35_RS06080;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=CCO35_RS06080;old_locus_tag=CCO35_06075 NZ_NPME01000001.1 Protein Homology CDS 1143999 1144970 . + 0 ID=cds-WP_001529070.1;Parent=gene-CCO35_RS06080;Dbxref=GenBank:WP_001529070.1;Name=WP_001529070.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=CCO35_RS06080;product=acetyl esterase;protein_id=WP_001529070.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1144967 1145929 . - . ID=gene-CCO35_RS06085;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CCO35_RS06085;old_locus_tag=CCO35_06080 NZ_NPME01000001.1 Protein Homology CDS 1144967 1145929 . - 0 ID=cds-WP_001250078.1;Parent=gene-CCO35_RS06085;Dbxref=GenBank:WP_001250078.1;Name=WP_001250078.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=CCO35_RS06085;product=ferrochelatase;protein_id=WP_001250078.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1146114 1146758 . - . ID=gene-CCO35_RS06090;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=CCO35_RS06090;old_locus_tag=CCO35_06085 NZ_NPME01000001.1 Protein Homology CDS 1146114 1146758 . - 0 ID=cds-WP_001220237.1;Parent=gene-CCO35_RS06090;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=CCO35_RS06090;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1147000 1148874 . - . ID=gene-CCO35_RS06100;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=CCO35_RS06100;old_locus_tag=CCO35_06095 NZ_NPME01000001.1 Protein Homology CDS 1147000 1148874 . - 0 ID=cds-WP_001610808.1;Parent=gene-CCO35_RS06100;Dbxref=GenBank:WP_001610808.1;Name=WP_001610808.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=CCO35_RS06100;product=molecular chaperone HtpG;protein_id=WP_001610808.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1148985 1149590 . - . ID=gene-CCO35_RS06105;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CCO35_RS06105;old_locus_tag=CCO35_06100 NZ_NPME01000001.1 Protein Homology CDS 1148985 1149590 . - 0 ID=cds-WP_001195023.1;Parent=gene-CCO35_RS06105;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=CCO35_RS06105;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1149590 1149919 . - . ID=gene-CCO35_RS06110;Name=CCO35_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06110;old_locus_tag=CCO35_06105 NZ_NPME01000001.1 Protein Homology CDS 1149590 1149919 . - 0 ID=cds-WP_000467098.1;Parent=gene-CCO35_RS06110;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=CCO35_RS06110;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1149965 1151893 . - . ID=gene-CCO35_RS06115;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CCO35_RS06115;old_locus_tag=CCO35_06110 NZ_NPME01000001.1 Protein Homology CDS 1149965 1151893 . - 0 ID=cds-WP_000121958.1;Parent=gene-CCO35_RS06115;Dbxref=GenBank:WP_000121958.1;Name=WP_000121958.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=CCO35_RS06115;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121958.1;transl_table=11 NZ_NPME01000001.1 cmsearch sequence_feature 1150568 1150632 . - . ID=id-CCO35_RS06115;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS06115 NZ_NPME01000001.1 RefSeq gene 1152007 1152558 . - . ID=gene-CCO35_RS06120;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=CCO35_RS06120;old_locus_tag=CCO35_06115 NZ_NPME01000001.1 Protein Homology CDS 1152007 1152558 . - 0 ID=cds-WP_000127350.1;Parent=gene-CCO35_RS06120;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=CCO35_RS06120;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1152711 1153088 . - . ID=gene-CCO35_RS06130;Name=CCO35_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06130;old_locus_tag=CCO35_06125 NZ_NPME01000001.1 Protein Homology CDS 1152711 1153088 . - 0 ID=cds-WP_001189860.1;Parent=gene-CCO35_RS06130;Dbxref=GenBank:WP_001189860.1;Name=WP_001189860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=CCO35_RS06130;product=DUF454 family protein;protein_id=WP_001189860.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1153157 1153684 . + . ID=gene-CCO35_RS06135;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=CCO35_RS06135;old_locus_tag=CCO35_06130 NZ_NPME01000001.1 Protein Homology CDS 1153157 1153684 . + 0 ID=cds-WP_001575715.1;Parent=gene-CCO35_RS06135;Dbxref=GenBank:WP_001575715.1;Name=WP_001575715.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=CCO35_RS06135;product=primosomal replication protein N'';protein_id=WP_001575715.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1153698 1153865 . + . ID=gene-CCO35_RS06140;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=CCO35_RS06140;old_locus_tag=CCO35_06135 NZ_NPME01000001.1 Protein Homology CDS 1153698 1153865 . + 0 ID=cds-WP_000051161.1;Parent=gene-CCO35_RS06140;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=CCO35_RS06140;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1153935 1154858 . + . ID=gene-CCO35_RS06145;Name=CCO35_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06145;old_locus_tag=CCO35_06140 NZ_NPME01000001.1 Protein Homology CDS 1153935 1154858 . + 0 ID=cds-WP_000440512.1;Parent=gene-CCO35_RS06145;Dbxref=GenBank:WP_000440512.1;Name=WP_000440512.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=CCO35_RS06145;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000440512.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1154900 1158262 . - . ID=gene-CCO35_RS06150;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=CCO35_RS06150;old_locus_tag=CCO35_06145 NZ_NPME01000001.1 Protein Homology CDS 1154900 1158262 . - 0 ID=cds-WP_015406076.1;Parent=gene-CCO35_RS06150;Dbxref=GenBank:WP_015406076.1;Name=WP_015406076.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=CCO35_RS06150;product=mechanosensitive channel MscK;protein_id=WP_015406076.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1158381 1159034 . - . ID=gene-CCO35_RS06155;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=CCO35_RS06155;old_locus_tag=CCO35_06150 NZ_NPME01000001.1 Protein Homology CDS 1158381 1159034 . - 0 ID=cds-WP_000101760.1;Parent=gene-CCO35_RS06155;Dbxref=GenBank:WP_000101760.1;Name=WP_000101760.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=CCO35_RS06155;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101760.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1159176 1160369 . + . ID=gene-CCO35_RS06160;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=CCO35_RS06160;old_locus_tag=CCO35_06155 NZ_NPME01000001.1 Protein Homology CDS 1159176 1160369 . + 0 ID=cds-WP_001039202.1;Parent=gene-CCO35_RS06160;Dbxref=GenBank:WP_001039202.1;Name=WP_001039202.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=CCO35_RS06160;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039202.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1160392 1163541 . + . ID=gene-CCO35_RS06165;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=CCO35_RS06165;old_locus_tag=CCO35_06160 NZ_NPME01000001.1 Protein Homology CDS 1160392 1163541 . + 0 ID=cds-WP_001132508.1;Parent=gene-CCO35_RS06165;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=CCO35_RS06165;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1164037 1164411 . + . ID=gene-CCO35_RS06170;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=CCO35_RS06170;old_locus_tag=CCO35_06165 NZ_NPME01000001.1 Protein Homology CDS 1164037 1164411 . + 0 ID=cds-WP_000344807.1;Parent=gene-CCO35_RS06170;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=CCO35_RS06170;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1164439 1164657 . + . ID=gene-CCO35_RS06175;Name=CCO35_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06175;old_locus_tag=CCO35_06170 NZ_NPME01000001.1 Protein Homology CDS 1164439 1164657 . + 0 ID=cds-WP_001280991.1;Parent=gene-CCO35_RS06175;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=CCO35_RS06175;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1164836 1165387 . + . ID=gene-CCO35_RS06180;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=CCO35_RS06180;old_locus_tag=CCO35_06175 NZ_NPME01000001.1 Protein Homology CDS 1164836 1165387 . + 0 ID=cds-WP_001278791.1;Parent=gene-CCO35_RS06180;Dbxref=GenBank:WP_001278791.1;Name=WP_001278791.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=CCO35_RS06180;product=maltose O-acetyltransferase;protein_id=WP_001278791.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1165505 1165975 . + . ID=gene-CCO35_RS06185;Name=CCO35_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06185;old_locus_tag=CCO35_06180 NZ_NPME01000001.1 Protein Homology CDS 1165505 1165975 . + 0 ID=cds-WP_000136183.1;Parent=gene-CCO35_RS06185;Dbxref=GenBank:WP_000136183.1;Name=WP_000136183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=CCO35_RS06185;product=YlaC family protein;protein_id=WP_000136183.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1166031 1166171 . - . ID=gene-CCO35_RS06190;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=CCO35_RS06190;old_locus_tag=CCO35_06185 NZ_NPME01000001.1 Protein Homology CDS 1166031 1166171 . - 0 ID=cds-WP_001197749.1;Parent=gene-CCO35_RS06190;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=CCO35_RS06190;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1166173 1166436 . - . ID=gene-CCO35_RS06195;Name=CCO35_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06195;old_locus_tag=CCO35_06190 NZ_NPME01000001.1 Protein Homology CDS 1166173 1166436 . - 0 ID=cds-WP_000801416.1;Parent=gene-CCO35_RS06195;Dbxref=GenBank:WP_000801416.1;Name=WP_000801416.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801422.1;locus_tag=CCO35_RS06195;product=type B 50S ribosomal protein L31;protein_id=WP_000801416.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1166661 1168211 . + . ID=gene-CCO35_RS06200;Name=CCO35_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06200;old_locus_tag=CCO35_06195 NZ_NPME01000001.1 Protein Homology CDS 1166661 1168211 . + 0 ID=cds-WP_023260098.1;Parent=gene-CCO35_RS06200;Dbxref=GenBank:WP_023260098.1;Name=WP_023260098.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=CCO35_RS06200;product=EAL domain-containing protein;protein_id=WP_023260098.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1168261 1168357 . - . ID=gene-CCO35_RS06205;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CCO35_RS06205;old_locus_tag=CCO35_06200 NZ_NPME01000001.1 cmsearch SRP_RNA 1168261 1168357 . - . ID=rna-CCO35_RS06205;Parent=gene-CCO35_RS06205;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS06205;product=signal recognition particle sRNA small type NZ_NPME01000001.1 cmsearch exon 1168261 1168357 . - . ID=exon-CCO35_RS06205-1;Parent=rna-CCO35_RS06205;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS06205;product=signal recognition particle sRNA small type NZ_NPME01000001.1 RefSeq gene 1168442 1168831 . + . ID=gene-CCO35_RS06210;Name=CCO35_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06210;old_locus_tag=CCO35_06205 NZ_NPME01000001.1 Protein Homology CDS 1168442 1168831 . + 0 ID=cds-WP_000961285.1;Parent=gene-CCO35_RS06210;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=CCO35_RS06210;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1168864 1169433 . - . ID=gene-CCO35_RS06215;Name=CCO35_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06215;old_locus_tag=CCO35_06210 NZ_NPME01000001.1 Protein Homology CDS 1168864 1169433 . - 0 ID=cds-WP_000779802.1;Parent=gene-CCO35_RS06215;Dbxref=GenBank:WP_000779802.1;Name=WP_000779802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=CCO35_RS06215;product=YbaY family lipoprotein;protein_id=WP_000779802.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1169648 1170508 . + . ID=gene-CCO35_RS06220;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=CCO35_RS06220;old_locus_tag=CCO35_06215 NZ_NPME01000001.1 Protein Homology CDS 1169648 1170508 . + 0 ID=cds-WP_000084176.1;Parent=gene-CCO35_RS06220;Dbxref=GenBank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=CCO35_RS06220;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1170608 1171894 . - . ID=gene-CCO35_RS06225;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=CCO35_RS06225;old_locus_tag=CCO35_06220 NZ_NPME01000001.1 Protein Homology CDS 1170608 1171894 . - 0 ID=cds-WP_000684916.1;Parent=gene-CCO35_RS06225;Dbxref=GenBank:WP_000684916.1;Name=WP_000684916.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=CCO35_RS06225;product=ammonium transporter AmtB;protein_id=WP_000684916.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1171926 1172264 . - . ID=gene-CCO35_RS06230;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=CCO35_RS06230;old_locus_tag=CCO35_06225 NZ_NPME01000001.1 Protein Homology CDS 1171926 1172264 . - 0 ID=cds-WP_000780342.1;Parent=gene-CCO35_RS06230;Dbxref=GenBank:WP_000780342.1;Name=WP_000780342.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=CCO35_RS06230;product=P-II family nitrogen regulator;protein_id=WP_000780342.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1172477 1174258 . - . ID=gene-CCO35_RS06235;Name=CCO35_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06235;old_locus_tag=CCO35_06230 NZ_NPME01000001.1 Protein Homology CDS 1172477 1174258 . - 0 ID=cds-WP_094888247.1;Parent=gene-CCO35_RS06235;Dbxref=GenBank:WP_094888247.1;Name=WP_094888247.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=CCO35_RS06235;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_094888247.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1174251 1176023 . - . ID=gene-CCO35_RS06240;Name=CCO35_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06240;old_locus_tag=CCO35_06235 NZ_NPME01000001.1 Protein Homology CDS 1174251 1176023 . - 0 ID=cds-WP_001235560.1;Parent=gene-CCO35_RS06240;Dbxref=GenBank:WP_001235560.1;Name=WP_001235560.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=CCO35_RS06240;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235560.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1176064 1176522 . - . ID=gene-CCO35_RS06245;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=CCO35_RS06245;old_locus_tag=CCO35_06240 NZ_NPME01000001.1 Protein Homology CDS 1176064 1176522 . - 0 ID=cds-WP_000884593.1;Parent=gene-CCO35_RS06245;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=CCO35_RS06245;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1176635 1177690 . + . ID=gene-CCO35_RS06250;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=CCO35_RS06250;old_locus_tag=CCO35_06245 NZ_NPME01000001.1 Protein Homology CDS 1176635 1177690 . + 0 ID=cds-WP_000987849.1;Parent=gene-CCO35_RS06250;Dbxref=GenBank:WP_000987849.1;Name=WP_000987849.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=CCO35_RS06250;product=cysteine desulfhydrase;protein_id=WP_000987849.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1177740 1178558 . - . ID=gene-CCO35_RS06255;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=CCO35_RS06255;old_locus_tag=CCO35_06250 NZ_NPME01000001.1 Protein Homology CDS 1177740 1178558 . - 0 ID=cds-WP_000113030.1;Parent=gene-CCO35_RS06255;Dbxref=GenBank:WP_000113030.1;Name=WP_000113030.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=CCO35_RS06255;product=HMP-PP phosphatase;protein_id=WP_000113030.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1178659 1180359 . + . ID=gene-CCO35_RS06260;Name=CCO35_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06260;old_locus_tag=CCO35_06255 NZ_NPME01000001.1 Protein Homology CDS 1178659 1180359 . + 0 ID=cds-WP_001238181.1;Parent=gene-CCO35_RS06260;Dbxref=GenBank:WP_001238181.1;Name=WP_001238181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=CCO35_RS06260;product=SgrR family transcriptional regulator;protein_id=WP_001238181.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1180424 1181119 . + . ID=gene-CCO35_RS06265;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CCO35_RS06265;old_locus_tag=CCO35_06260 NZ_NPME01000001.1 Protein Homology CDS 1180424 1181119 . + 0 ID=cds-WP_000817208.1;Parent=gene-CCO35_RS06265;Dbxref=GenBank:WP_000817208.1;Name=WP_000817208.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=CCO35_RS06265;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817208.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1181228 1181626 . - . ID=gene-CCO35_RS06270;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=CCO35_RS06270;old_locus_tag=CCO35_06265 NZ_NPME01000001.1 Protein Homology CDS 1181228 1181626 . - 0 ID=cds-WP_001194543.1;Parent=gene-CCO35_RS06270;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=CCO35_RS06270;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1181730 1182104 . - . ID=gene-CCO35_RS06275;Name=CCO35_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06275;old_locus_tag=CCO35_06270 NZ_NPME01000001.1 Protein Homology CDS 1181730 1182104 . - 0 ID=cds-WP_000680322.1;Parent=gene-CCO35_RS06275;Dbxref=GenBank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=CCO35_RS06275;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1182254 1184125 . - . ID=gene-CCO35_RS06280;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=CCO35_RS06280;old_locus_tag=CCO35_06275 NZ_NPME01000001.1 Protein Homology CDS 1182254 1184125 . - 0 ID=cds-WP_000969425.1;Parent=gene-CCO35_RS06280;Dbxref=GenBank:WP_000969425.1;Name=WP_000969425.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=CCO35_RS06280;product=peptidylprolyl isomerase;protein_id=WP_000969425.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1184416 1184706 . - . ID=gene-CCO35_RS06285;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=CCO35_RS06285;old_locus_tag=CCO35_06280 NZ_NPME01000001.1 Protein Homology CDS 1184416 1184706 . - 0 ID=cds-WP_254888479.1;Parent=gene-CCO35_RS06285;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=CCO35_RS06285;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1184897 1187251 . - . ID=gene-CCO35_RS06290;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=CCO35_RS06290;old_locus_tag=CCO35_06285 NZ_NPME01000001.1 Protein Homology CDS 1184897 1187251 . - 0 ID=cds-WP_001067723.1;Parent=gene-CCO35_RS06290;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=CCO35_RS06290;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1187437 1188708 . - . ID=gene-CCO35_RS06295;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CCO35_RS06295;old_locus_tag=CCO35_06290 NZ_NPME01000001.1 Protein Homology CDS 1187437 1188708 . - 0 ID=cds-WP_000130314.1;Parent=gene-CCO35_RS06295;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=CCO35_RS06295;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1188960 1189583 . - . ID=gene-CCO35_RS06300;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CCO35_RS06300;old_locus_tag=CCO35_06295 NZ_NPME01000001.1 Protein Homology CDS 1188960 1189583 . - 0 ID=cds-WP_000122257.1;Parent=gene-CCO35_RS06300;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=CCO35_RS06300;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1189830 1191128 . - . ID=gene-CCO35_RS06305;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CCO35_RS06305;old_locus_tag=CCO35_06300 NZ_NPME01000001.1 Protein Homology CDS 1189830 1191128 . - 0 ID=cds-WP_001198406.1;Parent=gene-CCO35_RS06305;Dbxref=GenBank:WP_001198406.1;Name=WP_001198406.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=CCO35_RS06305;product=trigger factor;protein_id=WP_001198406.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1191475 1191792 . - . ID=gene-CCO35_RS06315;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=CCO35_RS06315;old_locus_tag=CCO35_06310 NZ_NPME01000001.1 Protein Homology CDS 1191475 1191792 . - 0 ID=cds-WP_000973433.1;Parent=gene-CCO35_RS06315;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=CCO35_RS06315;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1192096 1192674 . + . ID=gene-CCO35_RS06325;Name=CCO35_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06325;old_locus_tag=CCO35_06320 NZ_NPME01000001.1 Protein Homology CDS 1192096 1192674 . + 0 ID=cds-WP_024134471.1;Parent=gene-CCO35_RS06325;Dbxref=GenBank:WP_024134471.1;Name=WP_024134471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=CCO35_RS06325;product=lipoprotein;protein_id=WP_024134471.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1192718 1194193 . + . ID=gene-CCO35_RS06330;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=CCO35_RS06330;old_locus_tag=CCO35_06325 NZ_NPME01000001.1 Protein Homology CDS 1192718 1194193 . + 0 ID=cds-WP_000098467.1;Parent=gene-CCO35_RS06330;Dbxref=GenBank:WP_000098467.1;Name=WP_000098467.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=CCO35_RS06330;product=muropeptide MFS transporter AmpG;protein_id=WP_000098467.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1194646 1195602 . + . ID=gene-CCO35_RS06335;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=CCO35_RS06335;old_locus_tag=CCO35_06330 NZ_NPME01000001.1 Protein Homology CDS 1194646 1195602 . + 0 ID=cds-WP_001239448.1;Parent=gene-CCO35_RS06335;Dbxref=GenBank:WP_001239448.1;Name=WP_001239448.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=CCO35_RS06335;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239448.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1195613 1197604 . + . ID=gene-CCO35_RS06340;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=CCO35_RS06340;old_locus_tag=CCO35_06335 NZ_NPME01000001.1 Protein Homology CDS 1195613 1197604 . + 0 ID=cds-WP_000467162.1;Parent=gene-CCO35_RS06340;Dbxref=GenBank:WP_000467162.1;Name=WP_000467162.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=CCO35_RS06340;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467162.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1197594 1198208 . + . ID=gene-CCO35_RS06345;Name=CCO35_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06345;old_locus_tag=CCO35_06340 NZ_NPME01000001.1 Protein Homology CDS 1197594 1198208 . + 0 ID=cds-WP_000179833.1;Parent=gene-CCO35_RS06345;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=CCO35_RS06345;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1198208 1198537 . + . ID=gene-CCO35_RS06350;Name=CCO35_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06350;old_locus_tag=CCO35_06345 NZ_NPME01000001.1 Protein Homology CDS 1198208 1198537 . + 0 ID=cds-WP_000019878.1;Parent=gene-CCO35_RS06350;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=CCO35_RS06350;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1198549 1199439 . + . ID=gene-CCO35_RS06355;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CCO35_RS06355;old_locus_tag=CCO35_06350 NZ_NPME01000001.1 Protein Homology CDS 1198549 1199439 . + 0 ID=cds-WP_000971352.1;Parent=gene-CCO35_RS06355;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=CCO35_RS06355;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1199660 1201024 . + . ID=gene-CCO35_RS06360;Name=CCO35_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06360;old_locus_tag=CCO35_06355 NZ_NPME01000001.1 Protein Homology CDS 1199660 1201024 . + 0 ID=cds-WP_001000935.1;Parent=gene-CCO35_RS06360;Dbxref=GenBank:WP_001000935.1;Name=WP_001000935.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=CCO35_RS06360;product=MFS transporter;protein_id=WP_001000935.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1201071 1201562 . - . ID=gene-CCO35_RS06365;Name=CCO35_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06365;old_locus_tag=CCO35_06360 NZ_NPME01000001.1 Protein Homology CDS 1201071 1201562 . - 0 ID=cds-WP_001138913.1;Parent=gene-CCO35_RS06365;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=CCO35_RS06365;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1201688 1202599 . + . ID=gene-CCO35_RS06370;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=CCO35_RS06370;old_locus_tag=CCO35_06365 NZ_NPME01000001.1 Protein Homology CDS 1201688 1202599 . + 0 ID=cds-WP_000705814.1;Parent=gene-CCO35_RS06370;Dbxref=GenBank:WP_000705814.1;Name=WP_000705814.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=CCO35_RS06370;product=2-dehydropantoate 2-reductase;protein_id=WP_000705814.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1202562 1203152 . + . ID=gene-CCO35_RS06375;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=CCO35_RS06375;old_locus_tag=CCO35_06370 NZ_NPME01000001.1 Protein Homology CDS 1202562 1203152 . + 0 ID=cds-WP_001275803.1;Parent=gene-CCO35_RS06375;Dbxref=GenBank:WP_001275803.1;Name=WP_001275803.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=CCO35_RS06375;product=protein deglycase YajL;protein_id=WP_001275803.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1203161 1203243 . - . ID=gene-CCO35_RS24285;Name=CCO35_RS24285;end_range=1203243,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24285;partial=true;pseudo=true;start_range=.,1203161 NZ_NPME01000001.1 Protein Homology CDS 1203161 1203243 . - 0 ID=cds-CCO35_RS24285;Parent=gene-CCO35_RS24285;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1203243,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO35_RS24285;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1203161;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1203249 1204058 . - . ID=gene-CCO35_RS06380;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=CCO35_RS06380;old_locus_tag=CCO35_06375 NZ_NPME01000001.1 Protein Homology CDS 1203249 1204058 . - 0 ID=cds-WP_001527428.1;Parent=gene-CCO35_RS06380;Dbxref=GenBank:WP_001527428.1;Name=WP_001527428.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=CCO35_RS06380;product=phosphonoacetaldehyde hydrolase;protein_id=WP_001527428.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1204068 1205171 . - . ID=gene-CCO35_RS06385;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=CCO35_RS06385;old_locus_tag=CCO35_06380 NZ_NPME01000001.1 Protein Homology CDS 1204068 1205171 . - 0 ID=cds-WP_000203956.1;Parent=gene-CCO35_RS06385;Dbxref=GenBank:WP_000203956.1;Name=WP_000203956.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=CCO35_RS06385;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_000203956.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1205311 1206030 . + . ID=gene-CCO35_RS06390;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=CCO35_RS06390;old_locus_tag=CCO35_06385 NZ_NPME01000001.1 Protein Homology CDS 1205311 1206030 . + 0 ID=cds-WP_031564525.1;Parent=gene-CCO35_RS06390;Dbxref=GenBank:WP_031564525.1;Name=WP_031564525.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=CCO35_RS06390;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_031564525.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1206228 1207241 . + . ID=gene-CCO35_RS06395;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=CCO35_RS06395;old_locus_tag=CCO35_06390 NZ_NPME01000001.1 Protein Homology CDS 1206228 1207241 . + 0 ID=cds-WP_000778000.1;Parent=gene-CCO35_RS06395;Dbxref=GenBank:WP_000778000.1;Name=WP_000778000.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=CCO35_RS06395;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_000778000.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1207247 1208356 . + . ID=gene-CCO35_RS06400;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=CCO35_RS06400;old_locus_tag=CCO35_06395 NZ_NPME01000001.1 Protein Homology CDS 1207247 1208356 . + 0 ID=cds-WP_000928796.1;Parent=gene-CCO35_RS06400;Dbxref=GenBank:WP_000928796.1;Name=WP_000928796.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=CCO35_RS06400;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_000928796.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1208359 1209219 . + . ID=gene-CCO35_RS06405;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=CCO35_RS06405;old_locus_tag=CCO35_06400 NZ_NPME01000001.1 Protein Homology CDS 1208359 1209219 . + 0 ID=cds-WP_000052718.1;Parent=gene-CCO35_RS06405;Dbxref=GenBank:WP_000052718.1;Name=WP_000052718.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=CCO35_RS06405;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_000052718.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1209222 1210019 . + . ID=gene-CCO35_RS06410;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=CCO35_RS06410;old_locus_tag=CCO35_06405 NZ_NPME01000001.1 Protein Homology CDS 1209222 1210019 . + 0 ID=cds-WP_000909790.1;Parent=gene-CCO35_RS06410;Dbxref=GenBank:WP_000909790.1;Name=WP_000909790.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=CCO35_RS06410;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909790.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1210063 1211511 . - . ID=gene-CCO35_RS06415;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CCO35_RS06415;old_locus_tag=CCO35_06410 NZ_NPME01000001.1 Protein Homology CDS 1210063 1211511 . - 0 ID=cds-WP_000668648.1;Parent=gene-CCO35_RS06415;Dbxref=GenBank:WP_000668648.1;Name=WP_000668648.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=CCO35_RS06415;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668648.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1211721 1211963 . + . ID=gene-CCO35_RS06420;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=CCO35_RS06420;old_locus_tag=CCO35_06415 NZ_NPME01000001.1 Protein Homology CDS 1211721 1211963 . + 0 ID=cds-WP_001124944.1;Parent=gene-CCO35_RS06420;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=CCO35_RS06420;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1211964 1212863 . + . ID=gene-CCO35_RS06425;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=CCO35_RS06425;old_locus_tag=CCO35_06420 NZ_NPME01000001.1 Protein Homology CDS 1211964 1212863 . + 0 ID=cds-WP_000348074.1;Parent=gene-CCO35_RS06425;Dbxref=GenBank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=CCO35_RS06425;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1212887 1214749 . + . ID=gene-CCO35_RS06430;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CCO35_RS06430;old_locus_tag=CCO35_06425 NZ_NPME01000001.1 Protein Homology CDS 1212887 1214749 . + 0 ID=cds-WP_000006777.1;Parent=gene-CCO35_RS06430;Dbxref=GenBank:WP_000006777.1;Name=WP_000006777.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=CCO35_RS06430;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006777.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1214806 1215780 . + . ID=gene-CCO35_RS06435;Name=CCO35_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06435;old_locus_tag=CCO35_06430 NZ_NPME01000001.1 Protein Homology CDS 1214806 1215780 . + 0 ID=cds-WP_001199858.1;Parent=gene-CCO35_RS06435;Dbxref=GenBank:WP_001199858.1;Name=WP_001199858.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=CCO35_RS06435;product=aldo/keto reductase;protein_id=WP_001199858.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1215884 1216399 . - . ID=gene-CCO35_RS06440;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=CCO35_RS06440;old_locus_tag=CCO35_06435 NZ_NPME01000001.1 Protein Homology CDS 1215884 1216399 . - 0 ID=cds-WP_000154056.1;Parent=gene-CCO35_RS06440;Dbxref=GenBank:WP_000154056.1;Name=WP_000154056.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=CCO35_RS06440;product=phosphatidylglycerophosphatase A;protein_id=WP_000154056.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1216377 1217354 . - . ID=gene-CCO35_RS06445;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=CCO35_RS06445;old_locus_tag=CCO35_06440 NZ_NPME01000001.1 Protein Homology CDS 1216377 1217354 . - 0 ID=cds-WP_000752146.1;Parent=gene-CCO35_RS06445;Dbxref=GenBank:WP_000752146.1;Name=WP_000752146.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459414.1;locus_tag=CCO35_RS06445;product=thiamine-phosphate kinase;protein_id=WP_000752146.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1217433 1217852 . - . ID=gene-CCO35_RS06450;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CCO35_RS06450;old_locus_tag=CCO35_06445 NZ_NPME01000001.1 Protein Homology CDS 1217433 1217852 . - 0 ID=cds-WP_000801129.1;Parent=gene-CCO35_RS06450;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=CCO35_RS06450;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1217873 1218343 . - . ID=gene-CCO35_RS06455;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=CCO35_RS06455;old_locus_tag=CCO35_06450 NZ_NPME01000001.1 Protein Homology CDS 1217873 1218343 . - 0 ID=cds-WP_001021370.1;Parent=gene-CCO35_RS06455;Dbxref=GenBank:WP_001021370.1;Name=WP_001021370.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=CCO35_RS06455;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021370.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1218432 1219535 . - . ID=gene-CCO35_RS06460;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CCO35_RS06460;old_locus_tag=CCO35_06455 NZ_NPME01000001.1 Protein Homology CDS 1218432 1219535 . - 0 ID=cds-WP_023207505.1;Parent=gene-CCO35_RS06460;Dbxref=GenBank:WP_023207505.1;Name=WP_023207505.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=CCO35_RS06460;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_023207505.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1219539 1219988 . - . ID=gene-CCO35_RS06465;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CCO35_RS06465;old_locus_tag=CCO35_06460 NZ_NPME01000001.1 Protein Homology CDS 1219539 1219988 . - 0 ID=cds-WP_000543533.1;Parent=gene-CCO35_RS06465;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=CCO35_RS06465;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1220140 1220679 . + . ID=gene-CCO35_RS06470;Name=CCO35_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06470;old_locus_tag=CCO35_06465 NZ_NPME01000001.1 Protein Homology CDS 1220140 1220679 . + 0 ID=cds-WP_000198486.1;Parent=gene-CCO35_RS06470;Dbxref=GenBank:WP_000198486.1;Name=WP_000198486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=CCO35_RS06470;product=DUF3251 domain-containing protein;protein_id=WP_000198486.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1220979 1221842 . + . ID=gene-CCO35_RS06475;Name=CCO35_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06475;old_locus_tag=CCO35_06470 NZ_NPME01000001.1 Protein Homology CDS 1220979 1221842 . + 0 ID=cds-WP_000752021.1;Parent=gene-CCO35_RS06475;Dbxref=GenBank:WP_000752021.1;Name=WP_000752021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=CCO35_RS06475;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1221926 1222033 . - . ID=gene-CCO35_RS24230;Name=CCO35_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24230 NZ_NPME01000001.1 Protein Homology CDS 1221926 1222033 . - 0 ID=cds-WP_000176312.1;Parent=gene-CCO35_RS24230;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=CCO35_RS24230;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1222472 1222819 . - . ID=gene-CCO35_RS06490;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=CCO35_RS06490;old_locus_tag=CCO35_06485 NZ_NPME01000001.1 Protein Homology CDS 1222472 1222819 . - 0 ID=cds-WP_000974818.1;Parent=gene-CCO35_RS06490;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=CCO35_RS06490;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1222913 1223884 . - . ID=gene-CCO35_RS06495;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=CCO35_RS06495;old_locus_tag=CCO35_06490 NZ_NPME01000001.1 Protein Homology CDS 1222913 1223884 . - 0 ID=cds-WP_000046629.1;Parent=gene-CCO35_RS06495;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=CCO35_RS06495;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1223895 1225742 . - . ID=gene-CCO35_RS06500;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=CCO35_RS06500;old_locus_tag=CCO35_06495 NZ_NPME01000001.1 Protein Homology CDS 1223895 1225742 . - 0 ID=cds-WP_000934811.1;Parent=gene-CCO35_RS06500;Dbxref=GenBank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=CCO35_RS06500;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1225770 1226102 . - . ID=gene-CCO35_RS06505;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CCO35_RS06505;old_locus_tag=CCO35_06500 NZ_NPME01000001.1 Protein Homology CDS 1225770 1226102 . - 0 ID=cds-WP_000007628.1;Parent=gene-CCO35_RS06505;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=CCO35_RS06505;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1226125 1227252 . - . ID=gene-CCO35_RS06510;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CCO35_RS06510;old_locus_tag=CCO35_06505 NZ_NPME01000001.1 Protein Homology CDS 1226125 1227252 . - 0 ID=cds-WP_000667305.1;Parent=gene-CCO35_RS06510;Dbxref=GenBank:WP_000667305.1;Name=WP_000667305.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=CCO35_RS06510;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667305.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1227437 1228501 . - . ID=gene-CCO35_RS06520;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CCO35_RS06520;old_locus_tag=CCO35_06515 NZ_NPME01000001.1 Protein Homology CDS 1227437 1228501 . - 0 ID=cds-WP_001266524.1;Parent=gene-CCO35_RS06520;Dbxref=GenBank:WP_001266524.1;Name=WP_001266524.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=CCO35_RS06520;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266524.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1228595 1229176 . + . ID=gene-CCO35_RS06525;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=CCO35_RS06525;old_locus_tag=CCO35_06520 NZ_NPME01000001.1 Protein Homology CDS 1228595 1229176 . + 0 ID=cds-WP_001009858.1;Parent=gene-CCO35_RS06525;Dbxref=GenBank:WP_001009858.1;Name=WP_001009858.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=CCO35_RS06525;product=ACP phosphodiesterase;protein_id=WP_001009858.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1229386 1229988 . + . ID=gene-CCO35_RS06530;Name=CCO35_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06530;old_locus_tag=CCO35_06525 NZ_NPME01000001.1 Protein Homology CDS 1229386 1229988 . + 0 ID=cds-WP_000244731.1;Parent=gene-CCO35_RS06530;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=CCO35_RS06530;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1230060 1231877 . - . ID=gene-CCO35_RS06535;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=CCO35_RS06535;old_locus_tag=CCO35_06530 NZ_NPME01000001.1 Protein Homology CDS 1230060 1231877 . - 0 ID=cds-WP_031564574.1;Parent=gene-CCO35_RS06535;Dbxref=GenBank:WP_031564574.1;Name=WP_031564574.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=CCO35_RS06535;product=maltodextrin glucosidase;protein_id=WP_031564574.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1232039 1233409 . - . ID=gene-CCO35_RS06540;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=CCO35_RS06540;old_locus_tag=CCO35_06535 NZ_NPME01000001.1 Protein Homology CDS 1232039 1233409 . - 0 ID=cds-WP_000445556.1;Parent=gene-CCO35_RS06540;Dbxref=GenBank:WP_000445556.1;Name=WP_000445556.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=CCO35_RS06540;product=proline-specific permease ProY;protein_id=WP_000445556.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1233484 1234803 . - . ID=gene-CCO35_RS06545;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=CCO35_RS06545;old_locus_tag=CCO35_06540 NZ_NPME01000001.1 Protein Homology CDS 1233484 1234803 . - 0 ID=cds-WP_000149625.1;Parent=gene-CCO35_RS06545;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=CCO35_RS06545;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1235212 1236507 . - . ID=gene-CCO35_RS06550;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=CCO35_RS06550;old_locus_tag=CCO35_06545 NZ_NPME01000001.1 Protein Homology CDS 1235212 1236507 . - 0 ID=cds-WP_000893638.1;Parent=gene-CCO35_RS06550;Dbxref=GenBank:WP_000893638.1;Name=WP_000893638.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=CCO35_RS06550;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893638.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1236577 1237266 . - . ID=gene-CCO35_RS06555;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=CCO35_RS06555;old_locus_tag=CCO35_06550 NZ_NPME01000001.1 Protein Homology CDS 1236577 1237266 . - 0 ID=cds-WP_000113921.1;Parent=gene-CCO35_RS06555;Dbxref=GenBank:WP_000113921.1;Name=WP_000113921.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=CCO35_RS06555;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113921.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1237480 1238682 . + . ID=gene-CCO35_RS06560;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CCO35_RS06560;old_locus_tag=CCO35_06555 NZ_NPME01000001.1 Protein Homology CDS 1237480 1238682 . + 0 ID=cds-WP_001221249.1;Parent=gene-CCO35_RS06560;Dbxref=GenBank:WP_001221249.1;Name=WP_001221249.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=CCO35_RS06560;product=exonuclease subunit SbcD;protein_id=WP_001221249.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1238679 1241819 . + . ID=gene-CCO35_RS06565;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CCO35_RS06565;old_locus_tag=CCO35_06560 NZ_NPME01000001.1 Protein Homology CDS 1238679 1241819 . + 0 ID=cds-WP_001610717.1;Parent=gene-CCO35_RS06565;Dbxref=GenBank:WP_001610717.1;Name=WP_001610717.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=CCO35_RS06565;product=exonuclease subunit SbcC;protein_id=WP_001610717.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1241992 1243164 . + . ID=gene-CCO35_RS06570;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=CCO35_RS06570;old_locus_tag=CCO35_06565 NZ_NPME01000001.1 Protein Homology CDS 1241992 1243164 . + 0 ID=cds-WP_000755629.1;Parent=gene-CCO35_RS06570;Dbxref=GenBank:WP_000755629.1;Name=WP_000755629.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=CCO35_RS06570;product=MFS transporter AraJ;protein_id=WP_000755629.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1243184 1244092 . - . ID=gene-CCO35_RS06575;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=CCO35_RS06575;old_locus_tag=CCO35_06570 NZ_NPME01000001.1 Protein Homology CDS 1243184 1244092 . - 0 ID=cds-WP_001219282.1;Parent=gene-CCO35_RS06575;Dbxref=GenBank:WP_001219282.1;Name=WP_001219282.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=CCO35_RS06575;product=fructokinase;protein_id=WP_001219282.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1244218 1245129 . + . ID=gene-CCO35_RS06580;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=CCO35_RS06580;old_locus_tag=CCO35_06575 NZ_NPME01000001.1 Protein Homology CDS 1244218 1245129 . + 0 ID=cds-WP_000964307.1;Parent=gene-CCO35_RS06580;Dbxref=GenBank:WP_000964307.1;Name=WP_000964307.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=CCO35_RS06580;product=recombination-associated protein RdgC;protein_id=WP_000964307.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1245167 1245451 . - . ID=gene-CCO35_RS06585;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=CCO35_RS06585;old_locus_tag=CCO35_06580 NZ_NPME01000001.1 Protein Homology CDS 1245167 1245451 . - 0 ID=cds-WP_000941953.1;Parent=gene-CCO35_RS06585;Dbxref=GenBank:WP_000941953.1;Name=WP_000941953.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=CCO35_RS06585;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941953.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1245522 1246199 . - . ID=gene-CCO35_RS06590;Name=CCO35_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06590;old_locus_tag=CCO35_06585 NZ_NPME01000001.1 Protein Homology CDS 1245522 1246199 . - 0 ID=cds-WP_001276437.1;Parent=gene-CCO35_RS06590;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=CCO35_RS06590;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1246450 1246641 . - . ID=gene-CCO35_RS06595;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=CCO35_RS06595;old_locus_tag=CCO35_06590 NZ_NPME01000001.1 Protein Homology CDS 1246450 1246641 . - 0 ID=cds-WP_001143161.1;Parent=gene-CCO35_RS06595;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=CCO35_RS06595;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1246668 1247213 . - . ID=gene-CCO35_RS06600;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=CCO35_RS06600;old_locus_tag=CCO35_06595 NZ_NPME01000001.1 Protein Homology CDS 1246668 1247213 . - 0 ID=cds-WP_000983570.1;Parent=gene-CCO35_RS06600;Dbxref=GenBank:WP_000983570.1;Name=WP_000983570.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=CCO35_RS06600;product=shikimate kinase AroL;protein_id=WP_000983570.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1247398 1247853 . - . ID=gene-CCO35_RS06605;Name=CCO35_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06605;old_locus_tag=CCO35_06600 NZ_NPME01000001.1 Protein Homology CDS 1247398 1247853 . - 0 ID=cds-WP_000158137.1;Parent=gene-CCO35_RS06605;Dbxref=GenBank:WP_000158137.1;Name=WP_000158137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=CCO35_RS06605;product=YaiI/YqxD family protein;protein_id=WP_000158137.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1247993 1248802 . + . ID=gene-CCO35_RS06610;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CCO35_RS06610;old_locus_tag=CCO35_06605 NZ_NPME01000001.1 Protein Homology CDS 1247993 1248802 . + 0 ID=cds-WP_000412193.1;Parent=gene-CCO35_RS06610;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=CCO35_RS06610;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1248817 1249929 . - . ID=gene-CCO35_RS06615;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=CCO35_RS06615;old_locus_tag=CCO35_06610 NZ_NPME01000001.1 Protein Homology CDS 1248817 1249929 . - 0 ID=cds-WP_023233102.1;Parent=gene-CCO35_RS06615;Dbxref=GenBank:WP_023233102.1;Name=WP_023233102.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=CCO35_RS06615;product=diguanylate cyclase AdrA;protein_id=WP_023233102.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1250021 1250341 . - . ID=gene-CCO35_RS06620;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=CCO35_RS06620;old_locus_tag=CCO35_06615 NZ_NPME01000001.1 Protein Homology CDS 1250021 1250341 . - 0 ID=cds-WP_000705162.1;Parent=gene-CCO35_RS06620;Dbxref=GenBank:WP_000705162.1;Name=WP_000705162.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=CCO35_RS06620;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705162.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1250694 1250954 . - . ID=gene-CCO35_RS06630;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=CCO35_RS06630;old_locus_tag=CCO35_06625 NZ_NPME01000001.1 Protein Homology CDS 1250694 1250954 . - 0 ID=cds-WP_001518423.1;Parent=gene-CCO35_RS06630;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=CCO35_RS06630;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1251251 1252462 . - . ID=gene-CCO35_RS06635;Name=CCO35_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06635;old_locus_tag=CCO35_06630 NZ_NPME01000001.1 Protein Homology CDS 1251251 1252462 . - 0 ID=cds-WP_000446772.1;Parent=gene-CCO35_RS06635;Dbxref=GenBank:WP_000446772.1;Name=WP_000446772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=CCO35_RS06635;product=multidrug efflux MFS transporter;protein_id=WP_000446772.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1252631 1253344 . - . ID=gene-CCO35_RS06640;Name=CCO35_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06640;old_locus_tag=CCO35_06635 NZ_NPME01000001.1 Protein Homology CDS 1252631 1253344 . - 0 ID=cds-WP_000480786.1;Parent=gene-CCO35_RS06640;Dbxref=GenBank:WP_000480786.1;Name=WP_000480786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=CCO35_RS06640;product=extensin family protein;protein_id=WP_000480786.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1253422 1254516 . + . ID=gene-CCO35_RS06645;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=CCO35_RS06645;old_locus_tag=CCO35_06640 NZ_NPME01000001.1 Protein Homology CDS 1253422 1254516 . + 0 ID=cds-WP_001096588.1;Parent=gene-CCO35_RS06645;Dbxref=GenBank:WP_001096588.1;Name=WP_001096588.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=CCO35_RS06645;product=D-alanine--D-alanine ligase;protein_id=WP_001096588.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1254542 1254757 . - . ID=gene-CCO35_RS06650;Name=CCO35_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06650;old_locus_tag=CCO35_06645 NZ_NPME01000001.1 Protein Homology CDS 1254542 1254757 . - 0 ID=cds-WP_001239240.1;Parent=gene-CCO35_RS06650;Dbxref=GenBank:WP_001239240.1;Name=WP_001239240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=CCO35_RS06650;product=DUF2754 family protein;protein_id=WP_001239240.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1255025 1255333 . + . ID=gene-CCO35_RS06655;Name=CCO35_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06655;old_locus_tag=CCO35_06650 NZ_NPME01000001.1 Protein Homology CDS 1255025 1255333 . + 0 ID=cds-WP_000763139.1;Parent=gene-CCO35_RS06655;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=CCO35_RS06655;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1255371 1256465 . - . ID=gene-CCO35_RS06660;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=CCO35_RS06660;old_locus_tag=CCO35_06655 NZ_NPME01000001.1 Protein Homology CDS 1255371 1256465 . - 0 ID=cds-WP_001271409.1;Parent=gene-CCO35_RS06660;Dbxref=GenBank:WP_001271409.1;Name=WP_001271409.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=CCO35_RS06660;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271409.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1256480 1257700 . - . ID=gene-CCO35_RS06665;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=CCO35_RS06665;old_locus_tag=CCO35_06660 NZ_NPME01000001.1 Protein Homology CDS 1256480 1257700 . - 0 ID=cds-WP_000477023.1;Parent=gene-CCO35_RS06665;Dbxref=GenBank:WP_000477023.1;Name=WP_000477023.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=CCO35_RS06665;product=peptide antibiotic transporter SbmA;protein_id=WP_000477023.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1258047 1259204 . + . ID=gene-CCO35_RS06675;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=CCO35_RS06675;old_locus_tag=CCO35_06670 NZ_NPME01000001.1 Protein Homology CDS 1258047 1259204 . + 0 ID=cds-WP_000830780.1;Parent=gene-CCO35_RS06675;Dbxref=GenBank:WP_000830780.1;Name=WP_000830780.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=CCO35_RS06675;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830780.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1259249 1259872 . - . ID=gene-CCO35_RS06680;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=CCO35_RS06680;old_locus_tag=CCO35_06675 NZ_NPME01000001.1 Protein Homology CDS 1259249 1259872 . - 0 ID=cds-WP_000950234.1;Parent=gene-CCO35_RS06680;Dbxref=GenBank:WP_000950234.1;Name=WP_000950234.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=CCO35_RS06680;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950234.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1259958 1262894 . - . ID=gene-CCO35_RS06685;Name=CCO35_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06685;old_locus_tag=CCO35_06680 NZ_NPME01000001.1 Protein Homology CDS 1259958 1262894 . - 0 ID=cds-WP_000556520.1;Parent=gene-CCO35_RS06685;Dbxref=GenBank:WP_000556520.1;Name=WP_000556520.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=CCO35_RS06685;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000556520.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1263407 1264381 . + . ID=gene-CCO35_RS06690;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CCO35_RS06690;old_locus_tag=CCO35_06685 NZ_NPME01000001.1 Protein Homology CDS 1263407 1264381 . + 0 ID=cds-WP_000130724.1;Parent=gene-CCO35_RS06690;Dbxref=GenBank:WP_000130724.1;Name=WP_000130724.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=CCO35_RS06690;product=porphobilinogen synthase;protein_id=WP_000130724.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1264488 1266374 . - . ID=gene-CCO35_RS06695;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=CCO35_RS06695;old_locus_tag=CCO35_06690 NZ_NPME01000001.1 Protein Homology CDS 1264488 1266374 . - 0 ID=cds-WP_000010222.1;Parent=gene-CCO35_RS06695;Dbxref=GenBank:WP_000010222.1;Name=WP_000010222.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=CCO35_RS06695;product=propionate--CoA ligase;protein_id=WP_000010222.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1266415 1267866 . - . ID=gene-CCO35_RS06700;Name=CCO35_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06700;old_locus_tag=CCO35_06695 NZ_NPME01000001.1 Protein Homology CDS 1266415 1267866 . - 0 ID=cds-WP_000107074.1;Parent=gene-CCO35_RS06700;Dbxref=GenBank:WP_000107074.1;Name=WP_000107074.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=CCO35_RS06700;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_000107074.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1267906 1269075 . - . ID=gene-CCO35_RS06705;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=CCO35_RS06705;old_locus_tag=CCO35_06700 NZ_NPME01000001.1 Protein Homology CDS 1267906 1269075 . - 0 ID=cds-WP_001285877.1;Parent=gene-CCO35_RS06705;Dbxref=GenBank:WP_001285877.1;Name=WP_001285877.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=CCO35_RS06705;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285877.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1269186 1270073 . - . ID=gene-CCO35_RS06710;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=CCO35_RS06710;old_locus_tag=CCO35_06705 NZ_NPME01000001.1 Protein Homology CDS 1269186 1270073 . - 0 ID=cds-WP_000052223.1;Parent=gene-CCO35_RS06710;Dbxref=GenBank:WP_000052223.1;Name=WP_000052223.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=CCO35_RS06710;product=methylisocitrate lyase;protein_id=WP_000052223.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1270339 1271955 . + . ID=gene-CCO35_RS06715;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=CCO35_RS06715;old_locus_tag=CCO35_06710 NZ_NPME01000001.1 Protein Homology CDS 1270339 1271955 . + 0 ID=cds-WP_000205265.1;Parent=gene-CCO35_RS06715;Dbxref=GenBank:WP_000205265.1;Name=WP_000205265.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000205266.1;locus_tag=CCO35_RS06715;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000205265.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1272100 1272375 . - . ID=gene-CCO35_RS06720;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=CCO35_RS06720;old_locus_tag=CCO35_06715 NZ_NPME01000001.1 Protein Homology CDS 1272100 1272375 . - 0 ID=cds-WP_000848026.1;Parent=gene-CCO35_RS06720;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=CCO35_RS06720;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1272607 1273239 . + . ID=gene-CCO35_RS06725;Name=CCO35_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06725;old_locus_tag=CCO35_06720 NZ_NPME01000001.1 Protein Homology CDS 1272607 1273239 . + 0 ID=cds-WP_000433131.1;Parent=gene-CCO35_RS06725;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=CCO35_RS06725;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1273280 1275388 . - . ID=gene-CCO35_RS06730;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=CCO35_RS06730;old_locus_tag=CCO35_06725 NZ_NPME01000001.1 Protein Homology CDS 1273280 1275388 . - 0 ID=cds-WP_140428281.1;Parent=gene-CCO35_RS06730;Dbxref=GenBank:WP_140428281.1;Name=WP_140428281.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=CCO35_RS06730;product=ferrioxamine B receptor FoxA;protein_id=WP_140428281.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1275534 1276538 . - . ID=gene-CCO35_RS06735;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=CCO35_RS06735;old_locus_tag=CCO35_06730 NZ_NPME01000001.1 Protein Homology CDS 1275534 1276538 . - 0 ID=cds-WP_000074611.1;Parent=gene-CCO35_RS06735;Dbxref=GenBank:WP_000074611.1;Name=WP_000074611.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=CCO35_RS06735;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074611.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1276634 1276826 . - . ID=gene-CCO35_RS23970;Name=CCO35_RS23970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23970;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 1276634 1276826 . - 0 ID=cds-CCO35_RS23970;Parent=gene-CCO35_RS23970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=CCO35_RS23970;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1276805 1276876 . - . ID=gene-CCO35_RS24235;Name=CCO35_RS24235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24235;partial=true;pseudo=true;start_range=.,1276805 NZ_NPME01000001.1 Protein Homology CDS 1276805 1276876 . - 0 ID=cds-CCO35_RS24235;Parent=gene-CCO35_RS24235;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=CCO35_RS24235;partial=true;product=DUF2474 family protein;pseudo=true;start_range=.,1276805;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1276876 1277886 . - . ID=gene-CCO35_RS06745;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO35_RS06745;old_locus_tag=CCO35_06740 NZ_NPME01000001.1 Protein Homology CDS 1276876 1277886 . - 0 ID=cds-WP_000151045.1;Parent=gene-CCO35_RS06745;Dbxref=GenBank:WP_000151045.1;Name=WP_000151045.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=CCO35_RS06745;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151045.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1277883 1279286 . - . ID=gene-CCO35_RS06750;Name=CCO35_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06750;old_locus_tag=CCO35_06745 NZ_NPME01000001.1 Protein Homology CDS 1277883 1279286 . - 0 ID=cds-WP_000393711.1;Parent=gene-CCO35_RS06750;Dbxref=GenBank:WP_000393711.1;Name=WP_000393711.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=CCO35_RS06750;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393711.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1279403 1279504 . - . ID=gene-CCO35_RS06755;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=CCO35_RS06755;old_locus_tag=CCO35_06750 NZ_NPME01000001.1 Protein Homology CDS 1279403 1279504 . - 0 ID=cds-WP_000934834.1;Parent=gene-CCO35_RS06755;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=CCO35_RS06755;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1279781 1282753 . - . ID=gene-CCO35_RS06760;Name=CCO35_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06760;old_locus_tag=CCO35_06755 NZ_NPME01000001.1 Protein Homology CDS 1279781 1282753 . - 0 ID=cds-WP_077916001.1;Parent=gene-CCO35_RS06760;Dbxref=GenBank:WP_077916001.1;Name=WP_077916001.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=CCO35_RS06760;product=type III restriction-modification system endonuclease;protein_id=WP_077916001.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1282763 1284721 . - . ID=gene-CCO35_RS06765;Name=CCO35_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06765;old_locus_tag=CCO35_06760 NZ_NPME01000001.1 Protein Homology CDS 1282763 1284721 . - 0 ID=cds-WP_000910364.1;Parent=gene-CCO35_RS06765;Dbxref=GenBank:WP_000910364.1;Name=WP_000910364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=CCO35_RS06765;product=site-specific DNA-methyltransferase;protein_id=WP_000910364.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1284910 1286163 . - . ID=gene-CCO35_RS06770;Name=CCO35_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06770;old_locus_tag=CCO35_06765 NZ_NPME01000001.1 Protein Homology CDS 1284910 1286163 . - 0 ID=cds-WP_000288504.1;Parent=gene-CCO35_RS06770;Dbxref=GenBank:WP_000288504.1;Name=WP_000288504.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=CCO35_RS06770;product=MFS transporter;protein_id=WP_000288504.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1286455 1286649 . - . ID=gene-CCO35_RS06775;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=CCO35_RS06775;old_locus_tag=CCO35_06770 NZ_NPME01000001.1 Protein Homology CDS 1286455 1286649 . - 0 ID=cds-WP_001159470.1;Parent=gene-CCO35_RS06775;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=CCO35_RS06775;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1286727 1287191 . - . ID=gene-CCO35_RS06780;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=CCO35_RS06780;old_locus_tag=CCO35_06775 NZ_NPME01000001.1 Protein Homology CDS 1286727 1287191 . - 0 ID=cds-WP_001020583.1;Parent=gene-CCO35_RS06780;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=CCO35_RS06780;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1287203 1289491 . - . ID=gene-CCO35_RS06785;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=CCO35_RS06785;old_locus_tag=CCO35_06780 NZ_NPME01000001.1 Protein Homology CDS 1287203 1289491 . - 0 ID=cds-WP_031564643.1;Parent=gene-CCO35_RS06785;Dbxref=GenBank:WP_031564643.1;Name=WP_031564643.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=CCO35_RS06785;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_031564643.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1289768 1290994 . + . ID=gene-CCO35_RS06790;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=CCO35_RS06790;old_locus_tag=CCO35_06785 NZ_NPME01000001.1 Protein Homology CDS 1289768 1290994 . + 0 ID=cds-WP_023197128.1;Parent=gene-CCO35_RS06790;Dbxref=GenBank:WP_023197128.1;Name=WP_023197128.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=CCO35_RS06790;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_023197128.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1290991 1294158 . + . ID=gene-CCO35_RS06795;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=CCO35_RS06795;old_locus_tag=CCO35_06790 NZ_NPME01000001.1 Protein Homology CDS 1290991 1294158 . + 0 ID=cds-WP_031564646.1;Parent=gene-CCO35_RS06795;Dbxref=GenBank:WP_031564646.1;Name=WP_031564646.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=CCO35_RS06795;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_031564646.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1294175 1295632 . + . ID=gene-CCO35_RS06800;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=CCO35_RS06800;old_locus_tag=CCO35_06795 NZ_NPME01000001.1 Protein Homology CDS 1294175 1295632 . + 0 ID=cds-WP_001610632.1;Parent=gene-CCO35_RS06800;Dbxref=GenBank:WP_001610632.1;Name=WP_001610632.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=CCO35_RS06800;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_001610632.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1295702 1296061 . - . ID=gene-CCO35_RS06805;Name=CCO35_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06805;old_locus_tag=CCO35_06800 NZ_NPME01000001.1 Protein Homology CDS 1295702 1296061 . - 0 ID=cds-WP_000722976.1;Parent=gene-CCO35_RS06805;Dbxref=GenBank:WP_000722976.1;Name=WP_000722976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=CCO35_RS06805;product=DUF4156 domain-containing protein;protein_id=WP_000722976.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1296119 1296343 . - . ID=gene-CCO35_RS06810;Name=CCO35_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06810;old_locus_tag=CCO35_06805 NZ_NPME01000001.1 Protein Homology CDS 1296119 1296343 . - 0 ID=cds-WP_000737124.1;Parent=gene-CCO35_RS06810;Dbxref=GenBank:WP_000737124.1;Name=WP_000737124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=CCO35_RS06810;product=membrane protein;protein_id=WP_000737124.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1296354 1296995 . - . ID=gene-CCO35_RS06815;Name=CCO35_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06815;old_locus_tag=CCO35_06810 NZ_NPME01000001.1 Protein Homology CDS 1296354 1296995 . - 0 ID=cds-WP_000610827.1;Parent=gene-CCO35_RS06815;Dbxref=GenBank:WP_000610827.1;Name=WP_000610827.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=CCO35_RS06815;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610827.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1297139 1297663 . - . ID=gene-CCO35_RS06820;Name=CCO35_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06820;old_locus_tag=CCO35_06815 NZ_NPME01000001.1 Protein Homology CDS 1297139 1297663 . - 0 ID=cds-WP_000830237.1;Parent=gene-CCO35_RS06820;Dbxref=GenBank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=CCO35_RS06820;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1298065 1298553 . - . ID=gene-CCO35_RS06825;Name=CCO35_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06825;old_locus_tag=CCO35_06820 NZ_NPME01000001.1 Protein Homology CDS 1298065 1298553 . - 0 ID=cds-WP_000545419.1;Parent=gene-CCO35_RS06825;Dbxref=GenBank:WP_000545419.1;Name=WP_000545419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=CCO35_RS06825;product=hypothetical protein;protein_id=WP_000545419.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1298526 1299269 . - . ID=gene-CCO35_RS06830;Name=CCO35_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06830;old_locus_tag=CCO35_06825 NZ_NPME01000001.1 Protein Homology CDS 1298526 1299269 . - 0 ID=cds-WP_000081363.1;Parent=gene-CCO35_RS06830;Dbxref=GenBank:WP_000081363.1;Name=WP_000081363.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=CCO35_RS06830;product=transcriptional regulator;protein_id=WP_000081363.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1299369 1300943 . - . ID=gene-CCO35_RS06835;Name=CCO35_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06835;old_locus_tag=CCO35_06830 NZ_NPME01000001.1 Protein Homology CDS 1299369 1300943 . - 0 ID=cds-WP_000868297.1;Parent=gene-CCO35_RS06835;Dbxref=GenBank:WP_000868297.1;Name=WP_000868297.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=CCO35_RS06835;product=EAL domain-containing protein;protein_id=WP_000868297.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1301456 1301756 . - . ID=gene-CCO35_RS06845;Name=CCO35_RS06845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS06845;old_locus_tag=CCO35_06840;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 1301456 1301756 . - 0 ID=cds-CCO35_RS06845;Parent=gene-CCO35_RS06845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=CCO35_RS06845;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1301729 1302463 . - . ID=gene-CCO35_RS06850;Name=CCO35_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06850;old_locus_tag=CCO35_06845 NZ_NPME01000001.1 Protein Homology CDS 1301729 1302463 . - 0 ID=cds-WP_001005860.1;Parent=gene-CCO35_RS06850;Dbxref=GenBank:WP_001005860.1;Name=WP_001005860.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=CCO35_RS06850;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001005860.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1303126 1303662 . + . ID=gene-CCO35_RS06860;Name=CCO35_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06860;old_locus_tag=CCO35_06855 NZ_NPME01000001.1 Protein Homology CDS 1303126 1303662 . + 0 ID=cds-WP_000062033.1;Parent=gene-CCO35_RS06860;Dbxref=GenBank:WP_000062033.1;Name=WP_000062033.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=CCO35_RS06860;product=fimbrial protein;protein_id=WP_000062033.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1303724 1304485 . + . ID=gene-CCO35_RS06865;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=CCO35_RS06865;old_locus_tag=CCO35_06860 NZ_NPME01000001.1 Protein Homology CDS 1303724 1304485 . + 0 ID=cds-WP_000781492.1;Parent=gene-CCO35_RS06865;Dbxref=GenBank:WP_000781492.1;Name=WP_000781492.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=CCO35_RS06865;product=fimbrial biogenesis chaperone StbB;protein_id=WP_000781492.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1304469 1307030 . + . ID=gene-CCO35_RS06870;Name=CCO35_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06870;old_locus_tag=CCO35_06865 NZ_NPME01000001.1 Protein Homology CDS 1304469 1307030 . + 0 ID=cds-WP_080148140.1;Parent=gene-CCO35_RS06870;Dbxref=GenBank:WP_080148140.1;Name=WP_080148140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=CCO35_RS06870;product=fimbrial outer membrane usher protein;protein_id=WP_080148140.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1307035 1308360 . + . ID=gene-CCO35_RS06875;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=CCO35_RS06875;old_locus_tag=CCO35_06870 NZ_NPME01000001.1 Protein Homology CDS 1307035 1308360 . + 0 ID=cds-WP_000899094.1;Parent=gene-CCO35_RS06875;Dbxref=GenBank:WP_000899094.1;Name=WP_000899094.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO35_RS06875;product=fimbrial usher protein StbD;protein_id=WP_000899094.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1308326 1309084 . + . ID=gene-CCO35_RS06880;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=CCO35_RS06880;old_locus_tag=CCO35_06875 NZ_NPME01000001.1 Protein Homology CDS 1308326 1309084 . + 0 ID=cds-WP_001247022.1;Parent=gene-CCO35_RS06880;Dbxref=GenBank:WP_001247022.1;Name=WP_001247022.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=CCO35_RS06880;product=fimbrial biogenesis chaperone StbE;protein_id=WP_001247022.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1309132 1309353 . - . ID=gene-CCO35_RS06885;Name=CCO35_RS06885;end_range=1309353,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS06885;old_locus_tag=CCO35_06880;partial=true;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 1309132 1309353 . - 0 ID=cds-CCO35_RS06885;Parent=gene-CCO35_RS06885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1309353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=CCO35_RS06885;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1309487 1309562 . - . ID=gene-CCO35_RS06890;Name=CCO35_RS06890;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS06890;old_locus_tag=CCO35_06885 NZ_NPME01000001.1 tRNAscan-SE tRNA 1309487 1309562 . - . ID=rna-CCO35_RS06890;Parent=gene-CCO35_RS06890;anticodon=(pos:complement(1309527..1309529));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS06890;product=tRNA-Thr NZ_NPME01000001.1 tRNAscan-SE exon 1309487 1309562 . - . ID=exon-CCO35_RS06890-1;Parent=rna-CCO35_RS06890;anticodon=(pos:complement(1309527..1309529));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS06890;product=tRNA-Thr NZ_NPME01000001.1 RefSeq gene 1309678 1310928 . - . ID=gene-CCO35_RS06895;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=CCO35_RS06895;old_locus_tag=CCO35_06890 NZ_NPME01000001.1 Protein Homology CDS 1309678 1310928 . - 0 ID=cds-WP_000893220.1;Parent=gene-CCO35_RS06895;Dbxref=GenBank:WP_000893220.1;Name=WP_000893220.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=CCO35_RS06895;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893220.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1310940 1312043 . - . ID=gene-CCO35_RS06900;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=CCO35_RS06900;old_locus_tag=CCO35_06895 NZ_NPME01000001.1 Protein Homology CDS 1310940 1312043 . - 0 ID=cds-WP_001285275.1;Parent=gene-CCO35_RS06900;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=CCO35_RS06900;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1312326 1313378 . + . ID=gene-CCO35_RS06905;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=CCO35_RS06905;old_locus_tag=CCO35_06900 NZ_NPME01000001.1 Protein Homology CDS 1312326 1313378 . + 0 ID=cds-WP_001043672.1;Parent=gene-CCO35_RS06905;Dbxref=GenBank:WP_001043672.1;Name=WP_001043672.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=CCO35_RS06905;product=phosphoporin PhoE;protein_id=WP_001043672.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1313429 1313830 . - . ID=gene-CCO35_RS06910;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=CCO35_RS06910;old_locus_tag=CCO35_06905 NZ_NPME01000001.1 Protein Homology CDS 1313429 1313830 . - 0 ID=cds-WP_000174693.1;Parent=gene-CCO35_RS06910;Dbxref=GenBank:WP_000174693.1;Name=WP_000174693.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=CCO35_RS06910;product=sigma factor-binding protein Crl;protein_id=WP_000174693.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1313888 1315132 . - . ID=gene-CCO35_RS06915;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=CCO35_RS06915;old_locus_tag=CCO35_06910 NZ_NPME01000001.1 Protein Homology CDS 1313888 1315132 . - 0 ID=cds-WP_000189586.1;Parent=gene-CCO35_RS06915;Dbxref=GenBank:WP_000189586.1;Name=WP_000189586.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=CCO35_RS06915;product=esterase FrsA;protein_id=WP_000189586.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1315221 1315679 . - . ID=gene-CCO35_RS06920;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=CCO35_RS06920;old_locus_tag=CCO35_06915 NZ_NPME01000001.1 Protein Homology CDS 1315221 1315679 . - 0 ID=cds-WP_001292018.1;Parent=gene-CCO35_RS06920;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=CCO35_RS06920;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1315928 1317385 . + . ID=gene-CCO35_RS06925;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=CCO35_RS06925;old_locus_tag=CCO35_06920 NZ_NPME01000001.1 Protein Homology CDS 1315928 1317385 . + 0 ID=cds-WP_001292981.1;Parent=gene-CCO35_RS06925;Dbxref=GenBank:WP_001292981.1;Name=WP_001292981.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=CCO35_RS06925;product=cytosol nonspecific dipeptidase;protein_id=WP_001292981.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1317541 1318155 . - . ID=gene-CCO35_RS06930;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=CCO35_RS06930;old_locus_tag=CCO35_06925 NZ_NPME01000001.1 Protein Homology CDS 1317541 1318155 . - 0 ID=cds-WP_000602087.1;Parent=gene-CCO35_RS06930;Dbxref=GenBank:WP_000602087.1;Name=WP_000602087.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=CCO35_RS06930;product=peptide chain release factor H;protein_id=WP_000602087.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1318152 1319291 . - . ID=gene-CCO35_RS06935;Name=CCO35_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06935;old_locus_tag=CCO35_06930 NZ_NPME01000001.1 Protein Homology CDS 1318152 1319291 . - 0 ID=cds-WP_000528904.1;Parent=gene-CCO35_RS06935;Dbxref=GenBank:WP_000528904.1;Name=WP_000528904.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=CCO35_RS06935;product=RNA ligase RtcB family protein;protein_id=WP_000528904.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1319510 1320565 . - . ID=gene-CCO35_RS06940;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CCO35_RS06940;old_locus_tag=CCO35_06935 NZ_NPME01000001.1 Protein Homology CDS 1319510 1320565 . - 0 ID=cds-WP_001226199.1;Parent=gene-CCO35_RS06940;Dbxref=GenBank:WP_001226199.1;Name=WP_001226199.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=CCO35_RS06940;product=DNA polymerase IV;protein_id=WP_001226199.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1320815 1321555 . + . ID=gene-CCO35_RS06945;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=CCO35_RS06945;old_locus_tag=CCO35_06940 NZ_NPME01000001.1 Protein Homology CDS 1320815 1321555 . + 0 ID=cds-WP_001225658.1;Parent=gene-CCO35_RS06945;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=CCO35_RS06945;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1321526 1322293 . - . ID=gene-CCO35_RS06950;Name=CCO35_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06950;old_locus_tag=CCO35_06945 NZ_NPME01000001.1 Protein Homology CDS 1321526 1322293 . - 0 ID=cds-WP_000333387.1;Parent=gene-CCO35_RS06950;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=CCO35_RS06950;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1322506 1323084 . - . ID=gene-CCO35_RS06955;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=CCO35_RS06955;old_locus_tag=CCO35_06950 NZ_NPME01000001.1 Protein Homology CDS 1322506 1323084 . - 0 ID=cds-WP_000284051.1;Parent=gene-CCO35_RS06955;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=CCO35_RS06955;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1323324 1325768 . + . ID=gene-CCO35_RS06960;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=CCO35_RS06960;old_locus_tag=CCO35_06955 NZ_NPME01000001.1 Protein Homology CDS 1323324 1325768 . + 0 ID=cds-WP_000973041.1;Parent=gene-CCO35_RS06960;Dbxref=GenBank:WP_000973041.1;Name=WP_000973041.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=CCO35_RS06960;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973041.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1325877 1326644 . + . ID=gene-CCO35_RS06965;Name=CCO35_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06965;old_locus_tag=CCO35_06960 NZ_NPME01000001.1 Protein Homology CDS 1325877 1326644 . + 0 ID=cds-WP_000015789.1;Parent=gene-CCO35_RS06965;Dbxref=GenBank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=CCO35_RS06965;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1326954 1327361 . + . ID=gene-CCO35_RS06975;Name=CCO35_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06975;old_locus_tag=CCO35_06970 NZ_NPME01000001.1 Protein Homology CDS 1326954 1327361 . + 0 ID=cds-WP_000788200.1;Parent=gene-CCO35_RS06975;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0061077,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=CCO35_RS06975;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1327707 1328426 . + . ID=gene-CCO35_RS06980;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=CCO35_RS06980;old_locus_tag=CCO35_06975 NZ_NPME01000001.1 Protein Homology CDS 1327707 1328426 . + 0 ID=cds-WP_000787605.1;Parent=gene-CCO35_RS06980;Dbxref=GenBank:WP_000787605.1;Name=WP_000787605.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=CCO35_RS06980;product=adhesin/invasin protein PagN;protein_id=WP_000787605.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1328433 1328618 . - . ID=gene-CCO35_RS06985;Name=CCO35_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS06985;old_locus_tag=CCO35_06980 NZ_NPME01000001.1 Protein Homology CDS 1328433 1328618 . - 0 ID=cds-WP_031602079.1;Parent=gene-CCO35_RS06985;Dbxref=GenBank:WP_031602079.1;Name=WP_031602079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543323.1;locus_tag=CCO35_RS06985;product=hypothetical protein;protein_id=WP_031602079.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1328675 1328787 . + . ID=gene-CCO35_RS23870;Name=CCO35_RS23870;end_range=1328787,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23870;partial=true;pseudo=true;start_range=.,1328675 NZ_NPME01000001.1 Protein Homology CDS 1328675 1328787 . + 0 ID=cds-CCO35_RS23870;Parent=gene-CCO35_RS23870;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1328787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=CCO35_RS23870;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1328675;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1329389 1330006 . - . ID=gene-CCO35_RS06995;Name=tioA;gbkey=Gene;gene=tioA;gene_biotype=protein_coding;locus_tag=CCO35_RS06995;old_locus_tag=CCO35_06990 NZ_NPME01000001.1 Protein Homology CDS 1329389 1330006 . - 0 ID=cds-WP_000241747.1;Parent=gene-CCO35_RS06995;Dbxref=GenBank:WP_000241747.1;Name=WP_000241747.1;gbkey=CDS;gene=tioA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241754.1;locus_tag=CCO35_RS06995;product=protein TioA;protein_id=WP_000241747.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1330146 1330601 . - . ID=gene-CCO35_RS07000;Name=tinR;gbkey=Gene;gene=tinR;gene_biotype=protein_coding;locus_tag=CCO35_RS07000;old_locus_tag=CCO35_06995 NZ_NPME01000001.1 Protein Homology CDS 1330146 1330601 . - 0 ID=cds-WP_000141547.1;Parent=gene-CCO35_RS07000;Dbxref=GenBank:WP_000141547.1;Name=WP_000141547.1;gbkey=CDS;gene=tinR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219490.1;locus_tag=CCO35_RS07000;product=Lrp/AsnC family transcriptional regulator TinR;protein_id=WP_000141547.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1330734 1331840 . - . ID=gene-CCO35_RS07005;Name=CCO35_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07005;old_locus_tag=CCO35_07000 NZ_NPME01000001.1 Protein Homology CDS 1330734 1331840 . - 0 ID=cds-WP_031564707.1;Parent=gene-CCO35_RS07005;Dbxref=GenBank:WP_031564707.1;Name=WP_031564707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000791811.1;locus_tag=CCO35_RS07005;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_031564707.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1331863 1334550 . - . ID=gene-CCO35_RS07010;Name=tcfC;gbkey=Gene;gene=tcfC;gene_biotype=protein_coding;locus_tag=CCO35_RS07010;old_locus_tag=CCO35_07005 NZ_NPME01000001.1 Protein Homology CDS 1331863 1334550 . - 0 ID=cds-WP_000092512.1;Parent=gene-CCO35_RS07010;Dbxref=GenBank:WP_000092512.1;Name=WP_000092512.1;gbkey=CDS;gene=tcfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092509.1;locus_tag=CCO35_RS07010;product=fimbrial outer membrane usher protein TcfC;protein_id=WP_000092512.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1334659 1335234 . - . ID=gene-CCO35_RS07015;Name=tcfB;gbkey=Gene;gene=tcfB;gene_biotype=protein_coding;locus_tag=CCO35_RS07015;old_locus_tag=CCO35_07010 NZ_NPME01000001.1 Protein Homology CDS 1334659 1335234 . - 0 ID=cds-WP_000287812.1;Parent=gene-CCO35_RS07015;Dbxref=GenBank:WP_000287812.1;Name=WP_000287812.1;gbkey=CDS;gene=tcfB;inference=COORDINATES: protein motif:HMM:NF011837.0;locus_tag=CCO35_RS07015;product=fimbrial protein TcfB;protein_id=WP_000287812.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1335285 1335995 . - . ID=gene-CCO35_RS07020;Name=tcfA;gbkey=Gene;gene=tcfA;gene_biotype=protein_coding;locus_tag=CCO35_RS07020;old_locus_tag=CCO35_07015 NZ_NPME01000001.1 Protein Homology CDS 1335285 1335995 . - 0 ID=cds-WP_001009507.1;Parent=gene-CCO35_RS07020;Dbxref=GenBank:WP_001009507.1;Name=WP_001009507.1;gbkey=CDS;gene=tcfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009503.1;locus_tag=CCO35_RS07020;product=fimbrial chaperone TcfA;protein_id=WP_001009507.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1336809 1337039 . - . ID=gene-CCO35_RS23975;Name=CCO35_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23975 NZ_NPME01000001.1 GeneMarkS-2+ CDS 1336809 1337039 . - 0 ID=cds-WP_000564356.1;Parent=gene-CCO35_RS23975;Dbxref=GenBank:WP_000564356.1;Name=WP_000564356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS23975;product=hypothetical protein;protein_id=WP_000564356.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1337031 1337588 . + . ID=gene-CCO35_RS07030;Name=CCO35_RS07030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS07030;old_locus_tag=CCO35_07025;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 1337031 1337588 . + 0 ID=cds-CCO35_RS07030;Parent=gene-CCO35_RS07030;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.6;locus_tag=CCO35_RS07030;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1337653 1337814 . - . ID=gene-CCO35_RS07035;Name=CCO35_RS07035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS07035;old_locus_tag=CCO35_07030;partial=true;pseudo=true;start_range=.,1337653 NZ_NPME01000001.1 Protein Homology CDS 1337653 1337814 . - 0 ID=cds-CCO35_RS07035;Parent=gene-CCO35_RS07035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=CCO35_RS07035;partial=true;product=transposase;pseudo=true;start_range=.,1337653;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1337895 1338014 . - . ID=gene-CCO35_RS07040;Name=CCO35_RS07040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS07040;old_locus_tag=CCO35_07035;partial=true;pseudo=true;start_range=.,1337895 NZ_NPME01000001.1 Protein Homology CDS 1337895 1338014 . - 0 ID=cds-CCO35_RS07040;Parent=gene-CCO35_RS07040;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=CCO35_RS07040;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1337895;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1338134 1339081 . - . ID=gene-CCO35_RS07045;Name=CCO35_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07045;old_locus_tag=CCO35_07040 NZ_NPME01000001.1 Protein Homology CDS 1338134 1339081 . - 0 ID=cds-WP_000970302.1;Parent=gene-CCO35_RS07045;Dbxref=GenBank:WP_000970302.1;Name=WP_000970302.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=CCO35_RS07045;product=LysR family transcriptional regulator;protein_id=WP_000970302.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1339578 1339815 . - . ID=gene-CCO35_RS07050;Name=CCO35_RS07050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS07050;old_locus_tag=CCO35_07045;partial=true;pseudo=true;start_range=.,1339578 NZ_NPME01000001.1 Protein Homology CDS 1339578 1339815 . - 0 ID=cds-CCO35_RS07050;Parent=gene-CCO35_RS07050;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=CCO35_RS07050;partial=true;product=PerC family transcriptional regulator;pseudo=true;start_range=.,1339578;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1339898 1340719 . - . ID=gene-CCO35_RS07055;Name=CCO35_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07055;old_locus_tag=CCO35_07050 NZ_NPME01000001.1 Protein Homology CDS 1339898 1340719 . - 0 ID=cds-WP_000119391.1;Parent=gene-CCO35_RS07055;Dbxref=GenBank:WP_000119391.1;Name=WP_000119391.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=CCO35_RS07055;product=polysaccharide deacetylase family protein;protein_id=WP_000119391.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1341126 1341596 . - . ID=gene-CCO35_RS07060;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=CCO35_RS07060;old_locus_tag=CCO35_07055 NZ_NPME01000001.1 Protein Homology CDS 1341126 1341596 . - 0 ID=cds-WP_000266941.1;Parent=gene-CCO35_RS07060;Dbxref=GenBank:WP_000266941.1;Name=WP_000266941.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=CCO35_RS07060;product=AfaD family invasin;protein_id=WP_000266941.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1341618 1344128 . - . ID=gene-CCO35_RS07065;Name=CCO35_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07065;old_locus_tag=CCO35_07060 NZ_NPME01000001.1 Protein Homology CDS 1341618 1344128 . - 0 ID=cds-WP_000669620.1;Parent=gene-CCO35_RS07065;Dbxref=GenBank:WP_000669620.1;Name=WP_000669620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=CCO35_RS07065;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000669620.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1344152 1344889 . - . ID=gene-CCO35_RS07070;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=CCO35_RS07070;old_locus_tag=CCO35_07065 NZ_NPME01000001.1 Protein Homology CDS 1344152 1344889 . - 0 ID=cds-WP_001530955.1;Parent=gene-CCO35_RS07070;Dbxref=GenBank:WP_001530955.1;Name=WP_001530955.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=CCO35_RS07070;product=pili assembly chaperone SafB;protein_id=WP_001530955.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1344973 1345467 . - . ID=gene-CCO35_RS07075;Name=CCO35_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07075;old_locus_tag=CCO35_07070 NZ_NPME01000001.1 Protein Homology CDS 1344973 1345467 . - 0 ID=cds-WP_061377699.1;Parent=gene-CCO35_RS07075;Dbxref=GenBank:WP_061377699.1;Name=WP_061377699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749863.1;locus_tag=CCO35_RS07075;product=pilus assembly protein;protein_id=WP_061377699.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1346228 1346801 . - . ID=gene-CCO35_RS07080;Name=CCO35_RS07080;end_range=1346801,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS07080;old_locus_tag=CCO35_07075;partial=true;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 1346228 1346801 . - 0 ID=cds-CCO35_RS07080;Parent=gene-CCO35_RS07080;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=1346801,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=CCO35_RS07080;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1346735 1346932 . - . ID=gene-CCO35_RS24290;Name=CCO35_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24290 NZ_NPME01000001.1 Protein Homology CDS 1346735 1346932 . - 0 ID=cds-WP_053258939.1;Parent=gene-CCO35_RS24290;Dbxref=GenBank:WP_053258939.1;Name=WP_053258939.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=CCO35_RS24290;product=transposase;protein_id=WP_053258939.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1346985 1347299 . + . ID=gene-CCO35_RS07085;Name=CCO35_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07085;old_locus_tag=CCO35_07080 NZ_NPME01000001.1 Protein Homology CDS 1346985 1347299 . + 0 ID=cds-WP_072103250.1;Parent=gene-CCO35_RS07085;Dbxref=GenBank:WP_072103250.1;Name=WP_072103250.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=CCO35_RS07085;product=SymE family type I addiction module toxin;protein_id=WP_072103250.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1347366 1347644 . - . ID=gene-CCO35_RS07090;Name=CCO35_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07090;old_locus_tag=CCO35_07085 NZ_NPME01000001.1 Protein Homology CDS 1347366 1347644 . - 0 ID=cds-WP_012664366.1;Parent=gene-CCO35_RS07090;Dbxref=GenBank:WP_012664366.1;Name=WP_012664366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=CCO35_RS07090;product=hypothetical protein;protein_id=WP_012664366.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1347769 1347855 . - . ID=gene-CCO35_RS24295;Name=CCO35_RS24295;end_range=1347855,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24295;partial=true;pseudo=true;start_range=.,1347769 NZ_NPME01000001.1 Protein Homology CDS 1347769 1347855 . - 0 ID=cds-CCO35_RS24295;Parent=gene-CCO35_RS24295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1347855,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000015242.1;locus_tag=CCO35_RS24295;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1347769;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1348208 1348654 . - . ID=gene-CCO35_RS07095;Name=CCO35_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07095;old_locus_tag=CCO35_07090 NZ_NPME01000001.1 Protein Homology CDS 1348208 1348654 . - 0 ID=cds-WP_000116458.1;Parent=gene-CCO35_RS07095;Dbxref=GenBank:WP_000116458.1;Name=WP_000116458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116458.1;locus_tag=CCO35_RS07095;product=hypothetical protein;protein_id=WP_000116458.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1348996 1350756 . - . ID=gene-CCO35_RS07100;Name=CCO35_RS07100;end_range=1350756,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS07100;old_locus_tag=CCO35_07095;partial=true;pseudo=true;start_range=.,1348996 NZ_NPME01000001.1 Protein Homology CDS 1348996 1350756 . - 0 ID=cds-CCO35_RS07100;Parent=gene-CCO35_RS07100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1350756,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO35_RS07100;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1348996;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1350979 1351095 . + . ID=gene-CCO35_RS07105;Name=CCO35_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07105;old_locus_tag=CCO35_07100 NZ_NPME01000001.1 Protein Homology CDS 1350979 1351095 . + 0 ID=cds-WP_237589497.1;Parent=gene-CCO35_RS07105;Dbxref=GenBank:WP_237589497.1;Name=WP_237589497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020421.6;locus_tag=CCO35_RS07105;product=type I toxin-antitoxin system SymE family toxin;protein_id=WP_237589497.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1351527 1352069 . - . ID=gene-CCO35_RS07110;Name=CCO35_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07110;old_locus_tag=CCO35_07105 NZ_NPME01000001.1 Protein Homology CDS 1351527 1352069 . - 0 ID=cds-WP_023214165.1;Parent=gene-CCO35_RS07110;Dbxref=GenBank:WP_023214165.1;Name=WP_023214165.1;Ontology_term=GO:0042546;gbkey=CDS;go_process=cell wall biogenesis|0042546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000890316.1;locus_tag=CCO35_RS07110;product=SMI1/KNR4 family protein;protein_id=WP_023214165.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1352063 1356211 . - . ID=gene-CCO35_RS07115;Name=CCO35_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07115;old_locus_tag=CCO35_07110 NZ_NPME01000001.1 Protein Homology CDS 1352063 1356211 . - 0 ID=cds-WP_094965327.1;Parent=gene-CCO35_RS07115;Dbxref=GenBank:WP_094965327.1;Name=WP_094965327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272650.1;locus_tag=CCO35_RS07115;product=RHS repeat-associated core domain-containing protein;protein_id=WP_094965327.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1356230 1356676 . - . ID=gene-CCO35_RS07120;Name=CCO35_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07120;old_locus_tag=CCO35_07115 NZ_NPME01000001.1 Protein Homology CDS 1356230 1356676 . - 0 ID=cds-WP_000375832.1;Parent=gene-CCO35_RS07120;Dbxref=GenBank:WP_000375832.1;Name=WP_000375832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459288.1;locus_tag=CCO35_RS07120;product=DcrB-related protein;protein_id=WP_000375832.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1356700 1358892 . - . ID=gene-CCO35_RS07125;Name=CCO35_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07125;old_locus_tag=CCO35_07120 NZ_NPME01000001.1 Protein Homology CDS 1356700 1358892 . - 0 ID=cds-WP_031564747.1;Parent=gene-CCO35_RS07125;Dbxref=GenBank:WP_031564747.1;Name=WP_031564747.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=CCO35_RS07125;product=type VI secretion system Vgr family protein;protein_id=WP_031564747.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1359267 1360106 . - . ID=gene-CCO35_RS07135;Name=CCO35_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07135;old_locus_tag=CCO35_07130 NZ_NPME01000001.1 Protein Homology CDS 1359267 1360106 . - 0 ID=cds-WP_000654209.1;Parent=gene-CCO35_RS07135;Dbxref=GenBank:WP_000654209.1;Name=WP_000654209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654209.1;locus_tag=CCO35_RS07135;product=hypothetical protein;protein_id=WP_000654209.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1360103 1360885 . - . ID=gene-CCO35_RS07140;Name=CCO35_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07140;old_locus_tag=CCO35_07135 NZ_NPME01000001.1 Protein Homology CDS 1360103 1360885 . - 0 ID=cds-WP_001254115.1;Parent=gene-CCO35_RS07140;Dbxref=GenBank:WP_001254115.1;Name=WP_001254115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254114.1;locus_tag=CCO35_RS07140;product=TagF domain-containing protein;protein_id=WP_001254115.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1360885 1364754 . - . ID=gene-CCO35_RS07145;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=CCO35_RS07145;old_locus_tag=CCO35_07140 NZ_NPME01000001.1 Protein Homology CDS 1360885 1364754 . - 0 ID=cds-WP_031564752.1;Parent=gene-CCO35_RS07145;Dbxref=GenBank:WP_031564752.1;Name=WP_031564752.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=CCO35_RS07145;product=Type VI secretion protein IcmF;protein_id=WP_031564752.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1364788 1365196 . - . ID=gene-CCO35_RS07150;Name=CCO35_RS07150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS07150;old_locus_tag=CCO35_07145;pseudo=true NZ_NPME01000001.1 Protein Homology CDS 1364788 1365196 . - 0 ID=cds-CCO35_RS07150;Parent=gene-CCO35_RS07150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=CCO35_RS07150;product=Shiga toxin A subunit;pseudo=true;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1365399 1366172 . - . ID=gene-CCO35_RS07160;Name=CCO35_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07160;old_locus_tag=CCO35_07155 NZ_NPME01000001.1 Protein Homology CDS 1365399 1366172 . - 0 ID=cds-WP_000976551.1;Parent=gene-CCO35_RS07160;Dbxref=GenBank:WP_000976551.1;Name=WP_000976551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=CCO35_RS07160;product=Rap1a/Tai family immunity protein;protein_id=WP_000976551.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1366177 1367481 . - . ID=gene-CCO35_RS07165;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=CCO35_RS07165;old_locus_tag=CCO35_07160 NZ_NPME01000001.1 Protein Homology CDS 1366177 1367481 . - 0 ID=cds-WP_000132488.1;Parent=gene-CCO35_RS07165;Dbxref=GenBank:WP_000132488.1;Name=WP_000132488.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=CCO35_RS07165;product=type VI secretion system protein TssL%2C long form;protein_id=WP_000132488.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1367478 1368821 . - . ID=gene-CCO35_RS07170;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=CCO35_RS07170;old_locus_tag=CCO35_07165 NZ_NPME01000001.1 Protein Homology CDS 1367478 1368821 . - 0 ID=cds-WP_000118728.1;Parent=gene-CCO35_RS07170;Dbxref=GenBank:WP_000118728.1;Name=WP_000118728.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=CCO35_RS07170;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118728.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1368825 1369361 . - . ID=gene-CCO35_RS07175;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=CCO35_RS07175;old_locus_tag=CCO35_07170 NZ_NPME01000001.1 Protein Homology CDS 1368825 1369361 . - 0 ID=cds-WP_094915177.1;Parent=gene-CCO35_RS07175;Dbxref=GenBank:WP_094915177.1;Name=WP_094915177.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO35_RS07175;product=type VI secretion system lipoprotein TssJ;protein_id=WP_094915177.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1369428 1369913 . - . ID=gene-CCO35_RS07180;Name=CCO35_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07180;old_locus_tag=CCO35_07175 NZ_NPME01000001.1 Protein Homology CDS 1369428 1369913 . - 0 ID=cds-WP_023251615.1;Parent=gene-CCO35_RS07180;Dbxref=GenBank:WP_023251615.1;Name=WP_023251615.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=CCO35_RS07180;product=Hcp family type VI secretion system effector;protein_id=WP_023251615.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1370056 1370439 . - . ID=gene-CCO35_RS07185;Name=CCO35_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07185;old_locus_tag=CCO35_07180 NZ_NPME01000001.1 Protein Homology CDS 1370056 1370439 . - 0 ID=cds-WP_000379082.1;Parent=gene-CCO35_RS07185;Dbxref=GenBank:WP_000379082.1;Name=WP_000379082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=CCO35_RS07185;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379082.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1370424 1370909 . - . ID=gene-CCO35_RS07190;Name=CCO35_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07190;old_locus_tag=CCO35_07185 NZ_NPME01000001.1 Protein Homology CDS 1370424 1370909 . - 0 ID=cds-WP_001081548.1;Parent=gene-CCO35_RS07190;Dbxref=GenBank:WP_001081548.1;Name=WP_001081548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=CCO35_RS07190;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081548.1;transl_table=11 NZ_NPME01000001.1 RefSeq pseudogene 1370952 1371146 . - . ID=gene-CCO35_RS23980;Name=CCO35_RS23980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23980;partial=true;pseudo=true;start_range=.,1370952 NZ_NPME01000001.1 Protein Homology CDS 1370952 1371146 . - 0 ID=cds-CCO35_RS23980;Parent=gene-CCO35_RS23980;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO35_RS23980;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;start_range=.,1370952;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1371214 1371699 . - . ID=gene-CCO35_RS07200;Name=CCO35_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07200;old_locus_tag=CCO35_07195 NZ_NPME01000001.1 Protein Homology CDS 1371214 1371699 . - 0 ID=cds-WP_000312802.1;Parent=gene-CCO35_RS07200;Dbxref=GenBank:WP_000312802.1;Name=WP_000312802.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=CCO35_RS07200;product=Hcp family type VI secretion system effector;protein_id=WP_000312802.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1371953 1372399 . - . ID=gene-CCO35_RS07205;Name=CCO35_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07205;old_locus_tag=CCO35_07200 NZ_NPME01000001.1 Protein Homology CDS 1371953 1372399 . - 0 ID=cds-WP_001602342.1;Parent=gene-CCO35_RS07205;Dbxref=GenBank:WP_001602342.1;Name=WP_001602342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535435.1;locus_tag=CCO35_RS07205;product=STY0301 family protein;protein_id=WP_001602342.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1372586 1374094 . - . ID=gene-CCO35_RS07215;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=CCO35_RS07215;old_locus_tag=CCO35_07210 NZ_NPME01000001.1 Protein Homology CDS 1372586 1374094 . - 0 ID=cds-WP_000013884.1;Parent=gene-CCO35_RS07215;Dbxref=GenBank:WP_000013884.1;Name=WP_000013884.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=CCO35_RS07215;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013884.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1374118 1374660 . - . ID=gene-CCO35_RS07220;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=CCO35_RS07220;old_locus_tag=CCO35_07215 NZ_NPME01000001.1 Protein Homology CDS 1374118 1374660 . - 0 ID=cds-WP_000996818.1;Parent=gene-CCO35_RS07220;Dbxref=GenBank:WP_000996818.1;Name=WP_000996818.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=CCO35_RS07220;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996818.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1374722 1375012 . - . ID=gene-CCO35_RS07225;Name=CCO35_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07225;old_locus_tag=CCO35_07220 NZ_NPME01000001.1 Protein Homology CDS 1374722 1375012 . - 0 ID=cds-WP_000175471.1;Parent=gene-CCO35_RS07225;Dbxref=GenBank:WP_000175471.1;Name=WP_000175471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175185.1;locus_tag=CCO35_RS07225;product=hypothetical protein;protein_id=WP_000175471.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1375098 1377761 . - . ID=gene-CCO35_RS07230;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=CCO35_RS07230;old_locus_tag=CCO35_07225 NZ_NPME01000001.1 Protein Homology CDS 1375098 1377761 . - 0 ID=cds-WP_000449780.1;Parent=gene-CCO35_RS07230;Dbxref=GenBank:WP_000449780.1;Name=WP_000449780.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449792.1;locus_tag=CCO35_RS07230;product=type VI secretion system ATPase TssH;protein_id=WP_000449780.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1378129 1379031 . + . ID=gene-CCO35_RS07235;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=CCO35_RS07235;old_locus_tag=CCO35_07230 NZ_NPME01000001.1 Protein Homology CDS 1378129 1379031 . + 0 ID=cds-WP_000806696.1;Parent=gene-CCO35_RS07235;Dbxref=GenBank:WP_000806696.1;Name=WP_000806696.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=CCO35_RS07235;product=type VI secretion system-associated protein TagK;protein_id=WP_000806696.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1379018 1379842 . + . ID=gene-CCO35_RS07240;Name=CCO35_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07240;old_locus_tag=CCO35_07235 NZ_NPME01000001.1 Protein Homology CDS 1379018 1379842 . + 0 ID=cds-WP_094965328.1;Parent=gene-CCO35_RS07240;Dbxref=GenBank:WP_094965328.1;Name=WP_094965328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=CCO35_RS07240;product=type VI secretion system accessory protein TagJ;protein_id=WP_094965328.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1379839 1380333 . + . ID=gene-CCO35_RS07245;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=CCO35_RS07245;old_locus_tag=CCO35_07240 NZ_NPME01000001.1 Protein Homology CDS 1379839 1380333 . + 0 ID=cds-WP_000108007.1;Parent=gene-CCO35_RS07245;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=CCO35_RS07245;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1380349 1382232 . + . ID=gene-CCO35_RS07250;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=CCO35_RS07250;old_locus_tag=CCO35_07245 NZ_NPME01000001.1 Protein Homology CDS 1380349 1382232 . + 0 ID=cds-WP_031564775.1;Parent=gene-CCO35_RS07250;Dbxref=GenBank:WP_031564775.1;Name=WP_031564775.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=CCO35_RS07250;product=type VI secretion system baseplate subunit TssF;protein_id=WP_031564775.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1382229 1383224 . + . ID=gene-CCO35_RS07255;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=CCO35_RS07255;old_locus_tag=CCO35_07250 NZ_NPME01000001.1 Protein Homology CDS 1382229 1383224 . + 0 ID=cds-WP_000145239.1;Parent=gene-CCO35_RS07255;Dbxref=GenBank:WP_000145239.1;Name=WP_000145239.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=CCO35_RS07255;product=type VI secretion system baseplate subunit TssG;protein_id=WP_000145239.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1383235 1384284 . + . ID=gene-CCO35_RS07260;Name=CCO35_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07260;old_locus_tag=CCO35_07255 NZ_NPME01000001.1 Protein Homology CDS 1383235 1384284 . + 0 ID=cds-WP_000367623.1;Parent=gene-CCO35_RS07260;Dbxref=GenBank:WP_000367623.1;Name=WP_000367623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=CCO35_RS07260;product=ImpA family type VI secretion system protein;protein_id=WP_000367623.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1384604 1384680 . - . ID=gene-CCO35_RS07265;Name=CCO35_RS07265;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS07265;old_locus_tag=CCO35_07260 NZ_NPME01000001.1 tRNAscan-SE tRNA 1384604 1384680 . - . ID=rna-CCO35_RS07265;Parent=gene-CCO35_RS07265;anticodon=(pos:complement(1384644..1384646));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS07265;product=tRNA-Asp NZ_NPME01000001.1 tRNAscan-SE exon 1384604 1384680 . - . ID=exon-CCO35_RS07265-1;Parent=rna-CCO35_RS07265;anticodon=(pos:complement(1384644..1384646));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS07265;product=tRNA-Asp NZ_NPME01000001.1 RefSeq gene 1384814 1385545 . - . ID=gene-CCO35_RS07270;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=CCO35_RS07270;old_locus_tag=CCO35_07265 NZ_NPME01000001.1 Protein Homology CDS 1384814 1385545 . - 0 ID=cds-WP_001562201.1;Parent=gene-CCO35_RS07270;Dbxref=GenBank:WP_001562201.1;Name=WP_001562201.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=CCO35_RS07270;product=DNA polymerase III subunit epsilon;protein_id=WP_001562201.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1385609 1386076 . + . ID=gene-CCO35_RS07275;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=CCO35_RS07275;old_locus_tag=CCO35_07270 NZ_NPME01000001.1 Protein Homology CDS 1385609 1386076 . + 0 ID=cds-WP_000917872.1;Parent=gene-CCO35_RS07275;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=CCO35_RS07275;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1386073 1386795 . - . ID=gene-CCO35_RS07280;Name=CCO35_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07280;old_locus_tag=CCO35_07275 NZ_NPME01000001.1 Protein Homology CDS 1386073 1386795 . - 0 ID=cds-WP_000801231.1;Parent=gene-CCO35_RS07280;Dbxref=GenBank:WP_000801231.1;Name=WP_000801231.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=CCO35_RS07280;product=class I SAM-dependent methyltransferase;protein_id=WP_000801231.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1386830 1387585 . + . ID=gene-CCO35_RS07285;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=CCO35_RS07285;old_locus_tag=CCO35_07280 NZ_NPME01000001.1 Protein Homology CDS 1386830 1387585 . + 0 ID=cds-WP_001052773.1;Parent=gene-CCO35_RS07285;Dbxref=GenBank:WP_001052773.1;Name=WP_001052773.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=CCO35_RS07285;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052773.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1387657 1389024 . + . ID=gene-CCO35_RS07290;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=CCO35_RS07290;old_locus_tag=CCO35_07285 NZ_NPME01000001.1 Protein Homology CDS 1387657 1389024 . + 0 ID=cds-WP_000644706.1;Parent=gene-CCO35_RS07290;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=CCO35_RS07290;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1389080 1389850 . - . ID=gene-CCO35_RS07295;Name=CCO35_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07295;old_locus_tag=CCO35_07290 NZ_NPME01000001.1 Protein Homology CDS 1389080 1389850 . - 0 ID=cds-WP_000207218.1;Parent=gene-CCO35_RS07295;Dbxref=GenBank:WP_000207218.1;Name=WP_000207218.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=CCO35_RS07295;product=class I SAM-dependent methyltransferase;protein_id=WP_000207218.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1389928 1390728 . - . ID=gene-CCO35_RS07300;Name=CCO35_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07300;old_locus_tag=CCO35_07295 NZ_NPME01000001.1 Protein Homology CDS 1389928 1390728 . - 0 ID=cds-WP_001230970.1;Parent=gene-CCO35_RS07300;Dbxref=GenBank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=CCO35_RS07300;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1390860 1392035 . - . ID=gene-CCO35_RS07305;Name=CCO35_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07305;old_locus_tag=CCO35_07300 NZ_NPME01000001.1 Protein Homology CDS 1390860 1392035 . - 0 ID=cds-WP_031564788.1;Parent=gene-CCO35_RS07305;Dbxref=GenBank:WP_031564788.1;Name=WP_031564788.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=CCO35_RS07305;product=MFS transporter;protein_id=WP_031564788.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1392140 1393111 . + . ID=gene-CCO35_RS07310;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=CCO35_RS07310;old_locus_tag=CCO35_07305 NZ_NPME01000001.1 Protein Homology CDS 1392140 1393111 . + 0 ID=cds-WP_000648532.1;Parent=gene-CCO35_RS07310;Dbxref=GenBank:WP_000648532.1;Name=WP_000648532.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648532.1;locus_tag=CCO35_RS07310;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648532.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1393077 1393880 . - . ID=gene-CCO35_RS07315;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=CCO35_RS07315;old_locus_tag=CCO35_07310 NZ_NPME01000001.1 Protein Homology CDS 1393077 1393880 . - 0 ID=cds-WP_031564791.1;Parent=gene-CCO35_RS07315;Dbxref=GenBank:WP_031564791.1;Name=WP_031564791.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=CCO35_RS07315;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_031564791.1;transl_table=11 NZ_NPME01000001.1 RefSeq gene 1394045 1394121 . - . ID=gene-CCO35_RS07320;Name=CCO35_RS07320;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS07320;old_locus_tag=CCO35_07315 NZ_NPME01000001.1 tRNAscan-SE tRNA 1394045 1394121 . - . ID=rna-CCO35_RS07320;Parent=gene-CCO35_RS07320;anticodon=(pos:complement(1394085..1394087));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS07320;product=tRNA-Asp NZ_NPME01000001.1 tRNAscan-SE exon 1394045 1394121 . - . ID=exon-CCO35_RS07320-1;Parent=rna-CCO35_RS07320;anticodon=(pos:complement(1394085..1394087));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS07320;product=tRNA-Asp NZ_NPME01000001.1 RefSeq gene 1394312 1394427 . - . ID=gene-CCO35_RS07325;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO35_RS07325;old_locus_tag=CCO35_07320 NZ_NPME01000001.1 cmsearch rRNA 1394312 1394427 . - . ID=rna-CCO35_RS07325;Parent=gene-CCO35_RS07325;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS07325;product=5S ribosomal RNA NZ_NPME01000001.1 cmsearch exon 1394312 1394427 . - . ID=exon-CCO35_RS07325-1;Parent=rna-CCO35_RS07325;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS07325;product=5S ribosomal RNA NZ_NPME01000001.1 RefSeq gene 1394522 1394624 . - . ID=gene-CCO35_RS07330;Name=CCO35_RS07330;end_range=1394624,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS07330;old_locus_tag=CCO35_07325;partial=true NZ_NPME01000001.1 cmsearch rRNA 1394522 1394624 . - . ID=rna-CCO35_RS07330;Parent=gene-CCO35_RS07330;Dbxref=RFAM:RF02541;end_range=1394624,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS07330;partial=true;product=23S ribosomal RNA NZ_NPME01000001.1 cmsearch exon 1394522 1394624 . - . ID=exon-CCO35_RS07330-1;Parent=rna-CCO35_RS07330;Dbxref=RFAM:RF02541;end_range=1394624,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS07330;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPME01000010.1 1 80306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000010.1 RefSeq region 1 80306 . + . ID=NZ_NPME01000010.1:1..80306;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000010.1 RefSeq gene 298 1002 . + . ID=gene-CCO35_RS22445;Name=CCO35_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22445;old_locus_tag=CCO35_22425 NZ_NPME01000010.1 Protein Homology CDS 298 1002 . + 0 ID=cds-WP_001131144.1;Parent=gene-CCO35_RS22445;Dbxref=GenBank:WP_001131144.1;Name=WP_001131144.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=CCO35_RS22445;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131144.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 1014 2441 . + . ID=gene-CCO35_RS22450;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=CCO35_RS22450;old_locus_tag=CCO35_22430 NZ_NPME01000010.1 Protein Homology CDS 1014 2441 . + 0 ID=cds-WP_000202071.1;Parent=gene-CCO35_RS22450;Dbxref=GenBank:WP_000202071.1;Name=WP_000202071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=CCO35_RS22450;product=multidrug transporter subunit MdtD;protein_id=WP_000202071.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 2407 3405 . - . ID=gene-CCO35_RS22455;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=CCO35_RS22455;old_locus_tag=CCO35_22435 NZ_NPME01000010.1 Protein Homology CDS 2407 3405 . - 0 ID=cds-WP_000224487.1;Parent=gene-CCO35_RS22455;Dbxref=GenBank:WP_000224487.1;Name=WP_000224487.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=CCO35_RS22455;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224487.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 3409 4338 . - . ID=gene-CCO35_RS22460;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO35_RS22460;old_locus_tag=CCO35_22440 NZ_NPME01000010.1 Protein Homology CDS 3409 4338 . - 0 ID=cds-WP_000844733.1;Parent=gene-CCO35_RS22460;Dbxref=GenBank:WP_000844733.1;Name=WP_000844733.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=CCO35_RS22460;product=ribokinase;protein_id=WP_000844733.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 4472 5362 . - . ID=gene-CCO35_RS22465;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=CCO35_RS22465;old_locus_tag=CCO35_22445 NZ_NPME01000010.1 Protein Homology CDS 4472 5362 . - 0 ID=cds-WP_001056260.1;Parent=gene-CCO35_RS22465;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=CCO35_RS22465;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 5387 6352 . - . ID=gene-CCO35_RS22470;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=CCO35_RS22470;old_locus_tag=CCO35_22450 NZ_NPME01000010.1 Protein Homology CDS 5387 6352 . - 0 ID=cds-WP_000211345.1;Parent=gene-CCO35_RS22470;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=CCO35_RS22470;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 6358 7863 . - . ID=gene-CCO35_RS22475;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=CCO35_RS22475;old_locus_tag=CCO35_22455 NZ_NPME01000010.1 Protein Homology CDS 6358 7863 . - 0 ID=cds-WP_000339368.1;Parent=gene-CCO35_RS22475;Dbxref=GenBank:WP_000339368.1;Name=WP_000339368.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=CCO35_RS22475;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339368.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 7871 8290 . - . ID=gene-CCO35_RS22480;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CCO35_RS22480;old_locus_tag=CCO35_22460 NZ_NPME01000010.1 Protein Homology CDS 7871 8290 . - 0 ID=cds-WP_000715944.1;Parent=gene-CCO35_RS22480;Dbxref=GenBank:WP_000715944.1;Name=WP_000715944.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=CCO35_RS22480;product=D-ribose pyranase;protein_id=WP_000715944.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 8487 10355 . - . ID=gene-CCO35_RS22485;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=CCO35_RS22485;old_locus_tag=CCO35_22465 NZ_NPME01000010.1 Protein Homology CDS 8487 10355 . - 0 ID=cds-WP_000102338.1;Parent=gene-CCO35_RS22485;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=CCO35_RS22485;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 10704 12200 . + . ID=gene-CCO35_RS22490;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=CCO35_RS22490;old_locus_tag=CCO35_22470 NZ_NPME01000010.1 Protein Homology CDS 10704 12200 . + 0 ID=cds-WP_000940987.1;Parent=gene-CCO35_RS22490;Dbxref=GenBank:WP_000940987.1;Name=WP_000940987.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=CCO35_RS22490;product=ATPase RavA;protein_id=WP_000940987.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 12194 13645 . + . ID=gene-CCO35_RS22495;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=CCO35_RS22495;old_locus_tag=CCO35_22475 NZ_NPME01000010.1 Protein Homology CDS 12194 13645 . + 0 ID=cds-WP_000956580.1;Parent=gene-CCO35_RS22495;Dbxref=GenBank:WP_000956580.1;Name=WP_000956580.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=CCO35_RS22495;product=ATPase RavA stimulator ViaA;protein_id=WP_000956580.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 13650 14642 . - . ID=gene-CCO35_RS22500;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=CCO35_RS22500;old_locus_tag=CCO35_22480 NZ_NPME01000010.1 Protein Homology CDS 13650 14642 . - 0 ID=cds-WP_000845114.1;Parent=gene-CCO35_RS22500;Dbxref=GenBank:WP_000845114.1;Name=WP_000845114.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=CCO35_RS22500;product=aspartate--ammonia ligase;protein_id=WP_000845114.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 14793 15251 . + . ID=gene-CCO35_RS22505;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=CCO35_RS22505;old_locus_tag=CCO35_22485 NZ_NPME01000010.1 Protein Homology CDS 14793 15251 . + 0 ID=cds-WP_000433016.1;Parent=gene-CCO35_RS22505;Dbxref=GenBank:WP_000433016.1;Name=WP_000433016.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=CCO35_RS22505;product=transcriptional regulator AsnC;protein_id=WP_000433016.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 15341 15784 . + . ID=gene-CCO35_RS22510;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=CCO35_RS22510;old_locus_tag=CCO35_22490 NZ_NPME01000010.1 Protein Homology CDS 15341 15784 . + 0 ID=cds-WP_001518982.1;Parent=gene-CCO35_RS22510;Dbxref=GenBank:WP_001518982.1;Name=WP_001518982.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=CCO35_RS22510;product=FMN-binding protein MioC;protein_id=WP_001518982.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 16163 18052 . + . ID=gene-CCO35_RS22515;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CCO35_RS22515;old_locus_tag=CCO35_22495 NZ_NPME01000010.1 Protein Homology CDS 16163 18052 . + 0 ID=cds-WP_000499876.1;Parent=gene-CCO35_RS22515;Dbxref=GenBank:WP_000499876.1;Name=WP_000499876.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=CCO35_RS22515;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499876.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 18155 18778 . + . ID=gene-CCO35_RS22520;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CCO35_RS22520;old_locus_tag=CCO35_22500 NZ_NPME01000010.1 Protein Homology CDS 18155 18778 . + 0 ID=cds-WP_001614677.1;Parent=gene-CCO35_RS22520;Dbxref=GenBank:WP_001614677.1;Name=WP_001614677.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=CCO35_RS22520;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001614677.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 19394 19774 . + . ID=gene-CCO35_RS22525;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=CCO35_RS22525;old_locus_tag=CCO35_22505 NZ_NPME01000010.1 Protein Homology CDS 19394 19774 . + 0 ID=cds-WP_000116685.1;Parent=gene-CCO35_RS22525;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=CCO35_RS22525;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 19783 20598 . + . ID=gene-CCO35_RS22530;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CCO35_RS22530;old_locus_tag=CCO35_22510 NZ_NPME01000010.1 Protein Homology CDS 19783 20598 . + 0 ID=cds-WP_000135632.1;Parent=gene-CCO35_RS22530;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=CCO35_RS22530;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 20645 20884 . + . ID=gene-CCO35_RS22535;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CCO35_RS22535;old_locus_tag=CCO35_22515 NZ_NPME01000010.1 Protein Homology CDS 20645 20884 . + 0 ID=cds-WP_000429386.1;Parent=gene-CCO35_RS22535;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=CCO35_RS22535;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 20944 21414 . + . ID=gene-CCO35_RS22540;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=CCO35_RS22540;old_locus_tag=CCO35_22520 NZ_NPME01000010.1 Protein Homology CDS 20944 21414 . + 0 ID=cds-WP_001052212.1;Parent=gene-CCO35_RS22540;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=CCO35_RS22540;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 21429 21962 . + . ID=gene-CCO35_RS22545;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=CCO35_RS22545;old_locus_tag=CCO35_22525 NZ_NPME01000010.1 Protein Homology CDS 21429 21962 . + 0 ID=cds-WP_001288957.1;Parent=gene-CCO35_RS22545;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=CCO35_RS22545;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 21975 23516 . + . ID=gene-CCO35_RS22550;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CCO35_RS22550;old_locus_tag=CCO35_22530 NZ_NPME01000010.1 Protein Homology CDS 21975 23516 . + 0 ID=cds-WP_001176751.1;Parent=gene-CCO35_RS22550;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=CCO35_RS22550;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 23567 24430 . + . ID=gene-CCO35_RS22555;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CCO35_RS22555;old_locus_tag=CCO35_22535 NZ_NPME01000010.1 Protein Homology CDS 23567 24430 . + 0 ID=cds-WP_000896506.1;Parent=gene-CCO35_RS22555;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=CCO35_RS22555;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 24457 25839 . + . ID=gene-CCO35_RS22560;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CCO35_RS22560;old_locus_tag=CCO35_22540 NZ_NPME01000010.1 Protein Homology CDS 24457 25839 . + 0 ID=cds-WP_000190499.1;Parent=gene-CCO35_RS22560;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=CCO35_RS22560;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 25860 26279 . + . ID=gene-CCO35_RS22565;Name=CCO35_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22565;old_locus_tag=CCO35_22545 NZ_NPME01000010.1 Protein Homology CDS 25860 26279 . + 0 ID=cds-WP_001251971.1;Parent=gene-CCO35_RS22565;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=CCO35_RS22565;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 26509 27207 . + . ID=gene-CCO35_RS22570;Name=CCO35_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22570;old_locus_tag=CCO35_22550 NZ_NPME01000010.1 Protein Homology CDS 26509 27207 . + 0 ID=cds-WP_000009908.1;Parent=gene-CCO35_RS22570;Dbxref=GenBank:WP_000009908.1;Name=WP_000009908.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=CCO35_RS22570;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000009908.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 27528 28898 . + . ID=gene-CCO35_RS22575;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CCO35_RS22575;old_locus_tag=CCO35_22555 NZ_NPME01000010.1 Protein Homology CDS 27528 28898 . + 0 ID=cds-WP_000934840.1;Parent=gene-CCO35_RS22575;Dbxref=GenBank:WP_000934840.1;Name=WP_000934840.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=CCO35_RS22575;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934840.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 29087 30916 . + . ID=gene-CCO35_RS22580;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CCO35_RS22580;old_locus_tag=CCO35_22560 NZ_NPME01000010.1 Protein Homology CDS 29087 30916 . + 0 ID=cds-WP_000334068.1;Parent=gene-CCO35_RS22580;Dbxref=GenBank:WP_000334068.1;Name=WP_000334068.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=CCO35_RS22580;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334068.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 31067 32824 . - . ID=gene-CCO35_RS22585;Name=CCO35_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22585;old_locus_tag=CCO35_22565 NZ_NPME01000010.1 Protein Homology CDS 31067 32824 . - 0 ID=cds-WP_000213157.1;Parent=gene-CCO35_RS22585;Dbxref=GenBank:WP_000213157.1;Name=WP_000213157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=CCO35_RS22585;product=SgrR family transcriptional regulator;protein_id=WP_000213157.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 32919 33737 . + . ID=gene-CCO35_RS22590;Name=CCO35_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22590;old_locus_tag=CCO35_22570 NZ_NPME01000010.1 Protein Homology CDS 32919 33737 . + 0 ID=cds-WP_000166716.1;Parent=gene-CCO35_RS22590;Dbxref=GenBank:WP_000166716.1;Name=WP_000166716.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=CCO35_RS22590;product=shikimate 5-dehydrogenase;protein_id=WP_000166716.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 33786 35159 . + . ID=gene-CCO35_RS22595;Name=CCO35_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22595;old_locus_tag=CCO35_22575 NZ_NPME01000010.1 Protein Homology CDS 33786 35159 . + 0 ID=cds-WP_000162546.1;Parent=gene-CCO35_RS22595;Dbxref=GenBank:WP_000162546.1;Name=WP_000162546.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=CCO35_RS22595;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_000162546.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 35325 36365 . + . ID=gene-CCO35_RS22600;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=CCO35_RS22600;old_locus_tag=CCO35_22580 NZ_NPME01000010.1 Protein Homology CDS 35325 36365 . + 0 ID=cds-WP_000867132.1;Parent=gene-CCO35_RS22600;Dbxref=GenBank:WP_000867132.1;Name=WP_000867132.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=CCO35_RS22600;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867132.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 36501 37460 . + . ID=gene-CCO35_RS22605;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CCO35_RS22605;old_locus_tag=CCO35_22585 NZ_NPME01000010.1 Protein Homology CDS 36501 37460 . + 0 ID=cds-WP_000741630.1;Parent=gene-CCO35_RS22605;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=CCO35_RS22605;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 37460 38350 . + . ID=gene-CCO35_RS22610;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CCO35_RS22610;old_locus_tag=CCO35_22590 NZ_NPME01000010.1 Protein Homology CDS 37460 38350 . + 0 ID=cds-WP_000212196.1;Parent=gene-CCO35_RS22610;Dbxref=GenBank:WP_000212196.1;Name=WP_000212196.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=CCO35_RS22610;product=phosphate ABC transporter permease PstA;protein_id=WP_000212196.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 38461 39234 . + . ID=gene-CCO35_RS22615;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CCO35_RS22615;old_locus_tag=CCO35_22595 NZ_NPME01000010.1 Protein Homology CDS 38461 39234 . + 0 ID=cds-WP_000063118.1;Parent=gene-CCO35_RS22615;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=CCO35_RS22615;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 39249 39974 . + . ID=gene-CCO35_RS22620;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CCO35_RS22620;old_locus_tag=CCO35_22600 NZ_NPME01000010.1 Protein Homology CDS 39249 39974 . + 0 ID=cds-WP_000377800.1;Parent=gene-CCO35_RS22620;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=CCO35_RS22620;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 40069 40734 . - . ID=gene-CCO35_RS22625;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=CCO35_RS22625;old_locus_tag=CCO35_22605 NZ_NPME01000010.1 Protein Homology CDS 40069 40734 . - 0 ID=cds-WP_000078081.1;Parent=gene-CCO35_RS22625;Dbxref=GenBank:WP_000078081.1;Name=WP_000078081.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=CCO35_RS22625;product=6-phosphogluconate phosphatase;protein_id=WP_000078081.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 40903 42240 . + . ID=gene-CCO35_RS22630;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=CCO35_RS22630;old_locus_tag=CCO35_22610 NZ_NPME01000010.1 Protein Homology CDS 40903 42240 . + 0 ID=cds-WP_001519317.1;Parent=gene-CCO35_RS22630;Dbxref=GenBank:WP_001519317.1;Name=WP_001519317.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=CCO35_RS22630;product=adenine permease AdeP;protein_id=WP_001519317.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 42285 42851 . - . ID=gene-CCO35_RS22635;Name=CCO35_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22635;old_locus_tag=CCO35_22615 NZ_NPME01000010.1 Protein Homology CDS 42285 42851 . - 0 ID=cds-WP_000005228.1;Parent=gene-CCO35_RS22635;Dbxref=GenBank:WP_000005228.1;Name=WP_000005228.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005228.1;locus_tag=CCO35_RS22635;product=NADPH-dependent FMN reductase;protein_id=WP_000005228.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 42870 43625 . - . ID=gene-CCO35_RS22640;Name=CCO35_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22640;old_locus_tag=CCO35_22620 NZ_NPME01000010.1 Protein Homology CDS 42870 43625 . - 0 ID=cds-WP_000190681.1;Parent=gene-CCO35_RS22640;Dbxref=GenBank:WP_000190681.1;Name=WP_000190681.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=CCO35_RS22640;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190681.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 43783 44742 . - . ID=gene-CCO35_RS22645;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=CCO35_RS22645;old_locus_tag=CCO35_22625 NZ_NPME01000010.1 Protein Homology CDS 43783 44742 . - 0 ID=cds-WP_000749361.1;Parent=gene-CCO35_RS22645;Dbxref=GenBank:WP_000749361.1;Name=WP_000749361.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=CCO35_RS22645;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000749361.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 44711 45898 . - . ID=gene-CCO35_RS22650;Name=CCO35_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22650;old_locus_tag=CCO35_22630 NZ_NPME01000010.1 Protein Homology CDS 44711 45898 . - 0 ID=cds-WP_000819611.1;Parent=gene-CCO35_RS22650;Dbxref=GenBank:WP_000819611.1;Name=WP_000819611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608974.1;locus_tag=CCO35_RS22650;product=MFS transporter;protein_id=WP_000819611.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 46791 47726 . - . ID=gene-CCO35_RS22660;Name=CCO35_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22660;old_locus_tag=CCO35_22640 NZ_NPME01000010.1 Protein Homology CDS 46791 47726 . - 0 ID=cds-WP_000353754.1;Parent=gene-CCO35_RS22660;Dbxref=GenBank:WP_000353754.1;Name=WP_000353754.1;Ontology_term=GO:0001171,GO:0051607;gbkey=CDS;go_process=reverse transcription|0001171||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000353756.1;locus_tag=CCO35_RS22660;product=retron St85 family RNA-directed DNA polymerase;protein_id=WP_000353754.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 47726 48688 . - . ID=gene-CCO35_RS22665;Name=CCO35_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22665;old_locus_tag=CCO35_22645 NZ_NPME01000010.1 Protein Homology CDS 47726 48688 . - 0 ID=cds-WP_000461377.1;Parent=gene-CCO35_RS22665;Dbxref=GenBank:WP_000461377.1;Name=WP_000461377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462744.1;locus_tag=CCO35_RS22665;product=retron St85 family effector protein;protein_id=WP_000461377.1;transl_table=11 NZ_NPME01000010.1 RefSeq pseudogene 49013 50230 . - . ID=gene-CCO35_RS22675;Name=CCO35_RS22675;end_range=50230,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS22675;old_locus_tag=CCO35_22655;partial=true;pseudo=true NZ_NPME01000010.1 Protein Homology CDS 49013 50230 . - 0 ID=cds-CCO35_RS22675;Parent=gene-CCO35_RS22675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=50230,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218309.1;locus_tag=CCO35_RS22675;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPME01000010.1 RefSeq gene 50554 51918 . - . ID=gene-CCO35_RS22680;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CCO35_RS22680;old_locus_tag=CCO35_22660 NZ_NPME01000010.1 Protein Homology CDS 50554 51918 . - 0 ID=cds-WP_001528140.1;Parent=gene-CCO35_RS22680;Dbxref=GenBank:WP_001528140.1;Name=WP_001528140.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=CCO35_RS22680;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_001528140.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 52060 53706 . - . ID=gene-CCO35_RS22685;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CCO35_RS22685;old_locus_tag=CCO35_22665 NZ_NPME01000010.1 Protein Homology CDS 52060 53706 . - 0 ID=cds-WP_000378283.1;Parent=gene-CCO35_RS22685;Dbxref=GenBank:WP_000378283.1;Name=WP_000378283.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=CCO35_RS22685;product=membrane protein insertase YidC;protein_id=WP_000378283.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 53709 53966 . - . ID=gene-CCO35_RS22690;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CCO35_RS22690;old_locus_tag=CCO35_22670 NZ_NPME01000010.1 Protein Homology CDS 53709 53966 . - 0 ID=cds-WP_001307474.1;Parent=gene-CCO35_RS22690;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=CCO35_RS22690;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 53930 54289 . - . ID=gene-CCO35_RS22695;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CCO35_RS22695;old_locus_tag=CCO35_22675 NZ_NPME01000010.1 Protein Homology CDS 53930 54289 . - 0 ID=cds-WP_000239725.1;Parent=gene-CCO35_RS22695;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=CCO35_RS22695;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 54306 54446 . - . ID=gene-CCO35_RS22700;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CCO35_RS22700;old_locus_tag=CCO35_22680 NZ_NPME01000010.1 Protein Homology CDS 54306 54446 . - 0 ID=cds-WP_000831330.1;Parent=gene-CCO35_RS22700;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=CCO35_RS22700;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 54675 54767 . - . ID=gene-CCO35_RS24405;Name=CCO35_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24405 NZ_NPME01000010.1 Protein Homology CDS 54675 54767 . - 0 ID=cds-WP_418142141.1;Parent=gene-CCO35_RS24405;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=CCO35_RS24405;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 55107 56507 . + . ID=gene-CCO35_RS22705;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CCO35_RS22705;old_locus_tag=CCO35_22685 NZ_NPME01000010.1 Protein Homology CDS 55107 56507 . + 0 ID=cds-WP_000059093.1;Parent=gene-CCO35_RS22705;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=CCO35_RS22705;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 56512 57612 . + . ID=gene-CCO35_RS22710;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CCO35_RS22710;old_locus_tag=CCO35_22690 NZ_NPME01000010.1 Protein Homology CDS 56512 57612 . + 0 ID=cds-WP_000673474.1;Parent=gene-CCO35_RS22710;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=CCO35_RS22710;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 57810 58883 . + . ID=gene-CCO35_RS22715;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CCO35_RS22715;old_locus_tag=CCO35_22695 NZ_NPME01000010.1 Protein Homology CDS 57810 58883 . + 0 ID=cds-WP_000059372.1;Parent=gene-CCO35_RS22715;Dbxref=GenBank:WP_000059372.1;Name=WP_000059372.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=CCO35_RS22715;product=DNA replication/repair protein RecF;protein_id=WP_000059372.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 58912 61326 . + . ID=gene-CCO35_RS22720;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CCO35_RS22720;old_locus_tag=CCO35_22700 NZ_NPME01000010.1 Protein Homology CDS 58912 61326 . + 0 ID=cds-WP_000072047.1;Parent=gene-CCO35_RS22720;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=CCO35_RS22720;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 61345 62241 . - . ID=gene-CCO35_RS22725;Name=CCO35_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22725;old_locus_tag=CCO35_22705 NZ_NPME01000010.1 Protein Homology CDS 61345 62241 . - 0 ID=cds-WP_001054587.1;Parent=gene-CCO35_RS22725;Dbxref=GenBank:WP_001054587.1;Name=WP_001054587.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=CCO35_RS22725;product=LysR family transcriptional regulator;protein_id=WP_001054587.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 62356 63549 . - . ID=gene-CCO35_RS22730;Name=CCO35_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22730;old_locus_tag=CCO35_22710 NZ_NPME01000010.1 Protein Homology CDS 62356 63549 . - 0 ID=cds-WP_000975837.1;Parent=gene-CCO35_RS22730;Dbxref=GenBank:WP_000975837.1;Name=WP_000975837.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=CCO35_RS22730;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000975837.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 63563 64825 . - . ID=gene-CCO35_RS22735;Name=CCO35_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22735;old_locus_tag=CCO35_22715 NZ_NPME01000010.1 Protein Homology CDS 63563 64825 . - 0 ID=cds-WP_000061262.1;Parent=gene-CCO35_RS22735;Dbxref=GenBank:WP_000061262.1;Name=WP_000061262.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=CCO35_RS22735;product=MFS transporter;protein_id=WP_000061262.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 65130 65942 . + . ID=gene-CCO35_RS22740;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=CCO35_RS22740;old_locus_tag=CCO35_22720 NZ_NPME01000010.1 Protein Homology CDS 65130 65942 . + 0 ID=cds-WP_000985571.1;Parent=gene-CCO35_RS22740;Dbxref=GenBank:WP_000985571.1;Name=WP_000985571.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=CCO35_RS22740;product=sugar-phosphatase;protein_id=WP_000985571.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 66144 67166 . + . ID=gene-CCO35_RS22745;Name=CCO35_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22745;old_locus_tag=CCO35_22725 NZ_NPME01000010.1 Protein Homology CDS 66144 67166 . + 0 ID=cds-WP_000747394.1;Parent=gene-CCO35_RS22745;Dbxref=GenBank:WP_000747394.1;Name=WP_000747394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528257.1;locus_tag=CCO35_RS22745;product=hypothetical protein;protein_id=WP_000747394.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 67163 68302 . + . ID=gene-CCO35_RS22750;Name=CCO35_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22750;old_locus_tag=CCO35_22730 NZ_NPME01000010.1 Protein Homology CDS 67163 68302 . + 0 ID=cds-WP_001078030.1;Parent=gene-CCO35_RS22750;Dbxref=GenBank:WP_001078030.1;Name=WP_001078030.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528293.1;locus_tag=CCO35_RS22750;product=BamA/TamA family outer membrane protein;protein_id=WP_001078030.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 68299 69426 . + . ID=gene-CCO35_RS22755;Name=CCO35_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22755;old_locus_tag=CCO35_22735 NZ_NPME01000010.1 Protein Homology CDS 68299 69426 . + 0 ID=cds-WP_015406218.1;Parent=gene-CCO35_RS22755;Dbxref=GenBank:WP_015406218.1;Name=WP_015406218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762570.1;locus_tag=CCO35_RS22755;product=DUF4056 domain-containing protein;protein_id=WP_015406218.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 69531 72266 . - . ID=gene-CCO35_RS22760;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=CCO35_RS22760;old_locus_tag=CCO35_22740 NZ_NPME01000010.1 Protein Homology CDS 69531 72266 . - 0 ID=cds-WP_031570950.1;Parent=gene-CCO35_RS22760;Dbxref=GenBank:WP_031570950.1;Name=WP_031570950.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=CCO35_RS22760;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_031570950.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 72346 73386 . + . ID=gene-CCO35_RS22765;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=CCO35_RS22765;old_locus_tag=CCO35_22745 NZ_NPME01000010.1 Protein Homology CDS 72346 73386 . + 0 ID=cds-WP_001202035.1;Parent=gene-CCO35_RS22765;Dbxref=GenBank:WP_001202035.1;Name=WP_001202035.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=CCO35_RS22765;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001202035.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 73359 74051 . - . ID=gene-CCO35_RS22770;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=CCO35_RS22770;old_locus_tag=CCO35_22750 NZ_NPME01000010.1 Protein Homology CDS 73359 74051 . - 0 ID=cds-WP_001562512.1;Parent=gene-CCO35_RS22770;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=CCO35_RS22770;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 74181 75365 . + . ID=gene-CCO35_RS22775;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=CCO35_RS22775;old_locus_tag=CCO35_22755 NZ_NPME01000010.1 Protein Homology CDS 74181 75365 . + 0 ID=cds-WP_001230254.1;Parent=gene-CCO35_RS22775;Dbxref=GenBank:WP_001230254.1;Name=WP_001230254.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=CCO35_RS22775;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230254.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 75355 77907 . + . ID=gene-CCO35_RS22780;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=CCO35_RS22780;old_locus_tag=CCO35_22760 NZ_NPME01000010.1 Protein Homology CDS 75355 77907 . + 0 ID=cds-WP_000790661.1;Parent=gene-CCO35_RS22780;Dbxref=GenBank:WP_000790661.1;Name=WP_000790661.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=CCO35_RS22780;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_000790661.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 77900 78532 . + . ID=gene-CCO35_RS22785;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=CCO35_RS22785;old_locus_tag=CCO35_22765 NZ_NPME01000010.1 Protein Homology CDS 77900 78532 . + 0 ID=cds-WP_001041512.1;Parent=gene-CCO35_RS22785;Dbxref=GenBank:WP_001041512.1;Name=WP_001041512.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=CCO35_RS22785;product=molecular chaperone TorD;protein_id=WP_001041512.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 78722 80122 . + . ID=gene-CCO35_RS22790;Name=CCO35_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22790;old_locus_tag=CCO35_22770 NZ_NPME01000010.1 Protein Homology CDS 78722 80122 . + 0 ID=cds-WP_000724469.1;Parent=gene-CCO35_RS22790;Dbxref=GenBank:WP_000724469.1;Name=WP_000724469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=CCO35_RS22790;product=cytochrome-c peroxidase;protein_id=WP_000724469.1;transl_table=11 NZ_NPME01000010.1 RefSeq gene 80128 80306 . + . ID=gene-CCO35_RS22795;Name=CCO35_RS22795;end_range=80306,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22795;old_locus_tag=CCO35_22775;partial=true NZ_NPME01000010.1 Protein Homology CDS 80128 80306 . + 0 ID=cds-WP_131087330.1;Parent=gene-CCO35_RS22795;Dbxref=GenBank:WP_131087330.1;Name=WP_131087330.1;Ontology_term=GO:0005524;end_range=80306,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO35_RS22795;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_131087330.1;transl_table=11 ##sequence-region NZ_NPME01000011.1 1 32913 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000011.1 RefSeq region 1 32913 . + . ID=NZ_NPME01000011.1:1..32913;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000011.1 RefSeq pseudogene 1 209 . + . ID=gene-CCO35_RS22800;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO35_RS22800;old_locus_tag=CCO35_22780;partial=true;pseudo=true;start_range=.,1 NZ_NPME01000011.1 Protein Homology CDS 1 209 . + 2 ID=cds-CCO35_RS22800;Parent=gene-CCO35_RS22800;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO35_RS22800;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 439 822 . + . ID=gene-CCO35_RS22805;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CCO35_RS22805;old_locus_tag=CCO35_22785 NZ_NPME01000011.1 Protein Homology CDS 439 822 . + 0 ID=cds-WP_001275691.1;Parent=gene-CCO35_RS22805;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=CCO35_RS22805;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 824 1369 . + . ID=gene-CCO35_RS22810;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CCO35_RS22810;old_locus_tag=CCO35_22790 NZ_NPME01000011.1 Protein Homology CDS 824 1369 . + 0 ID=cds-WP_001287521.1;Parent=gene-CCO35_RS22810;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=CCO35_RS22810;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 1527 1955 . + . ID=gene-CCO35_RS22815;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CCO35_RS22815;old_locus_tag=CCO35_22795 NZ_NPME01000011.1 Protein Homology CDS 1527 1955 . + 0 ID=cds-WP_001085925.1;Parent=gene-CCO35_RS22815;Dbxref=GenBank:WP_001085925.1;Name=WP_001085925.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=CCO35_RS22815;product=50S ribosomal protein L11;protein_id=WP_001085925.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 1959 2663 . + . ID=gene-CCO35_RS22820;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CCO35_RS22820;old_locus_tag=CCO35_22800 NZ_NPME01000011.1 Protein Homology CDS 1959 2663 . + 0 ID=cds-WP_001096676.1;Parent=gene-CCO35_RS22820;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=CCO35_RS22820;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 3079 3576 . + . ID=gene-CCO35_RS22830;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CCO35_RS22830;old_locus_tag=CCO35_22810 NZ_NPME01000011.1 Protein Homology CDS 3079 3576 . + 0 ID=cds-WP_001207203.1;Parent=gene-CCO35_RS22830;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=CCO35_RS22830;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 3643 4008 . + . ID=gene-CCO35_RS22835;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CCO35_RS22835;old_locus_tag=CCO35_22815 NZ_NPME01000011.1 Protein Homology CDS 3643 4008 . + 0 ID=cds-WP_000028882.1;Parent=gene-CCO35_RS22835;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=CCO35_RS22835;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 4326 8354 . + . ID=gene-CCO35_RS22840;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CCO35_RS22840;old_locus_tag=CCO35_22820 NZ_NPME01000011.1 Protein Homology CDS 4326 8354 . + 0 ID=cds-WP_000263105.1;Parent=gene-CCO35_RS22840;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=CCO35_RS22840;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 8431 12654 . + . ID=gene-CCO35_RS22845;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CCO35_RS22845;old_locus_tag=CCO35_22825 NZ_NPME01000011.1 Protein Homology CDS 8431 12654 . + 0 ID=cds-WP_000653963.1;Parent=gene-CCO35_RS22845;Dbxref=GenBank:WP_000653963.1;Name=WP_000653963.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=CCO35_RS22845;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653963.1;transl_table=11 NZ_NPME01000011.1 RefSeq pseudogene 12737 13017 . + . ID=gene-CCO35_RS24175;Name=CCO35_RS24175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24175;old_locus_tag=CCO35_22830;pseudo=true NZ_NPME01000011.1 Protein Homology CDS 12737 13017 . + 0 ID=cds-CCO35_RS24175;Parent=gene-CCO35_RS24175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001110920.1;locus_tag=CCO35_RS24175;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000011.1 RefSeq pseudogene 13019 13362 . - . ID=gene-CCO35_RS22855;Name=CCO35_RS22855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS22855;old_locus_tag=CCO35_22835;pseudo=true NZ_NPME01000011.1 Protein Homology CDS 13019 13362 . - 0 ID=cds-CCO35_RS22855;Parent=gene-CCO35_RS22855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=CCO35_RS22855;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_NPME01000011.1 RefSeq gene 13743 14771 . + . ID=gene-CCO35_RS22865;Name=CCO35_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22865;old_locus_tag=CCO35_22845 NZ_NPME01000011.1 Protein Homology CDS 13743 14771 . + 0 ID=cds-WP_000400590.1;Parent=gene-CCO35_RS22865;Dbxref=GenBank:WP_000400590.1;Name=WP_000400590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400598.1;locus_tag=CCO35_RS22865;product=type III secretion system effector arginine glycosyltransferase SseK1;protein_id=WP_000400590.1;transl_table=11 NZ_NPME01000011.1 RefSeq pseudogene 15005 15112 . - . ID=gene-CCO35_RS24410;Name=CCO35_RS24410;end_range=15112,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24410;partial=true;pseudo=true NZ_NPME01000011.1 Protein Homology CDS 15005 15112 . - 0 ID=cds-CCO35_RS24410;Parent=gene-CCO35_RS24410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=15112,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=CCO35_RS24410;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_NPME01000011.1 RefSeq pseudogene 15095 15279 . + . ID=gene-CCO35_RS22870;Name=CCO35_RS22870;end_range=15279,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS22870;old_locus_tag=CCO35_22850;partial=true;pseudo=true NZ_NPME01000011.1 Protein Homology CDS 15095 15279 . + 0 ID=cds-CCO35_RS22870;Parent=gene-CCO35_RS22870;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=15279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=CCO35_RS22870;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000011.1 RefSeq gene 15433 16566 . - . ID=gene-CCO35_RS22875;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=CCO35_RS22875;old_locus_tag=CCO35_22855 NZ_NPME01000011.1 Protein Homology CDS 15433 16566 . - 0 ID=cds-WP_000847573.1;Parent=gene-CCO35_RS22875;Dbxref=GenBank:WP_000847573.1;Name=WP_000847573.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=CCO35_RS22875;product=2-iminoacetate synthase ThiH;protein_id=WP_000847573.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 16563 17333 . - . ID=gene-CCO35_RS22880;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=CCO35_RS22880;old_locus_tag=CCO35_22860 NZ_NPME01000011.1 Protein Homology CDS 16563 17333 . - 0 ID=cds-WP_031571598.1;Parent=gene-CCO35_RS22880;Dbxref=GenBank:WP_031571598.1;Name=WP_031571598.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=CCO35_RS22880;product=thiazole synthase;protein_id=WP_031571598.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 17335 17535 . - . ID=gene-CCO35_RS22885;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CCO35_RS22885;old_locus_tag=CCO35_22865 NZ_NPME01000011.1 Protein Homology CDS 17335 17535 . - 0 ID=cds-WP_001166836.1;Parent=gene-CCO35_RS22885;Dbxref=GenBank:WP_001166836.1;Name=WP_001166836.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=CCO35_RS22885;product=sulfur carrier protein ThiS;protein_id=WP_001166836.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 17516 18274 . - . ID=gene-CCO35_RS22890;Name=CCO35_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22890;old_locus_tag=CCO35_22870 NZ_NPME01000011.1 Protein Homology CDS 17516 18274 . - 0 ID=cds-WP_000999769.1;Parent=gene-CCO35_RS22890;Dbxref=GenBank:WP_000999769.1;Name=WP_000999769.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=CCO35_RS22890;product=HesA/MoeB/ThiF family protein;protein_id=WP_000999769.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 18267 18902 . - . ID=gene-CCO35_RS22895;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CCO35_RS22895;old_locus_tag=CCO35_22875 NZ_NPME01000011.1 Protein Homology CDS 18267 18902 . - 0 ID=cds-WP_094965384.1;Parent=gene-CCO35_RS22895;Dbxref=GenBank:WP_094965384.1;Name=WP_094965384.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=CCO35_RS22895;product=thiamine phosphate synthase;protein_id=WP_094965384.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 18902 20797 . - . ID=gene-CCO35_RS22900;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CCO35_RS22900;old_locus_tag=CCO35_22880 NZ_NPME01000011.1 Protein Homology CDS 18902 20797 . - 0 ID=cds-WP_094965385.1;Parent=gene-CCO35_RS22900;Dbxref=GenBank:WP_094965385.1;Name=WP_094965385.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=CCO35_RS22900;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_094965385.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 21161 21649 . - . ID=gene-CCO35_RS22905;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=CCO35_RS22905;old_locus_tag=CCO35_22885 NZ_NPME01000011.1 Protein Homology CDS 21161 21649 . - 0 ID=cds-WP_000934317.1;Parent=gene-CCO35_RS22905;Dbxref=GenBank:WP_000934317.1;Name=WP_000934317.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=CCO35_RS22905;product=sigma D regulator;protein_id=WP_000934317.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 21742 22515 . + . ID=gene-CCO35_RS22910;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=CCO35_RS22910;old_locus_tag=CCO35_22890 NZ_NPME01000011.1 Protein Homology CDS 21742 22515 . + 0 ID=cds-WP_000373959.1;Parent=gene-CCO35_RS22910;Dbxref=GenBank:WP_000373959.1;Name=WP_000373959.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=CCO35_RS22910;product=NAD(+) diphosphatase;protein_id=WP_000373959.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 22556 23620 . + . ID=gene-CCO35_RS22915;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CCO35_RS22915;old_locus_tag=CCO35_22895 NZ_NPME01000011.1 Protein Homology CDS 22556 23620 . + 0 ID=cds-WP_000137620.1;Parent=gene-CCO35_RS22915;Dbxref=GenBank:WP_000137620.1;Name=WP_000137620.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=CCO35_RS22915;product=uroporphyrinogen decarboxylase;protein_id=WP_000137620.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 23630 24301 . + . ID=gene-CCO35_RS22920;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=CCO35_RS22920;old_locus_tag=CCO35_22900 NZ_NPME01000011.1 Protein Homology CDS 23630 24301 . + 0 ID=cds-WP_000362362.1;Parent=gene-CCO35_RS22920;Dbxref=GenBank:WP_000362362.1;Name=WP_000362362.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=CCO35_RS22920;product=deoxyribonuclease V;protein_id=WP_000362362.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 24343 24933 . + . ID=gene-CCO35_RS22925;Name=CCO35_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22925;old_locus_tag=CCO35_22905 NZ_NPME01000011.1 Protein Homology CDS 24343 24933 . + 0 ID=cds-WP_000940094.1;Parent=gene-CCO35_RS22925;Dbxref=GenBank:WP_000940094.1;Name=WP_000940094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=CCO35_RS22925;product=YjaG family protein;protein_id=WP_000940094.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 25120 25392 . + . ID=gene-CCO35_RS22930;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=CCO35_RS22930;old_locus_tag=CCO35_22910 NZ_NPME01000011.1 Protein Homology CDS 25120 25392 . + 0 ID=cds-WP_001044509.1;Parent=gene-CCO35_RS22930;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=CCO35_RS22930;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 25404 26096 . + . ID=gene-CCO35_RS22935;Name=CCO35_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22935;old_locus_tag=CCO35_22915 NZ_NPME01000011.1 Protein Homology CDS 25404 26096 . + 0 ID=cds-WP_001083932.1;Parent=gene-CCO35_RS22935;Dbxref=GenBank:WP_001083932.1;Name=WP_001083932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=CCO35_RS22935;product=DUF1481 domain-containing protein;protein_id=WP_001083932.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 26138 26593 . - . ID=gene-CCO35_RS22940;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=CCO35_RS22940;old_locus_tag=CCO35_22920 NZ_NPME01000011.1 Protein Homology CDS 26138 26593 . - 0 ID=cds-WP_000828129.1;Parent=gene-CCO35_RS22940;Dbxref=GenBank:WP_000828129.1;Name=WP_000828129.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=CCO35_RS22940;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828129.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 26847 28244 . + . ID=gene-CCO35_RS22945;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=CCO35_RS22945;old_locus_tag=CCO35_22925 NZ_NPME01000011.1 Protein Homology CDS 26847 28244 . + 0 ID=cds-WP_001550243.1;Parent=gene-CCO35_RS22945;Dbxref=GenBank:WP_001550243.1;Name=WP_001550243.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=CCO35_RS22945;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001550243.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 28250 29575 . + . ID=gene-CCO35_RS22950;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=CCO35_RS22950;old_locus_tag=CCO35_22930 NZ_NPME01000011.1 Protein Homology CDS 28250 29575 . + 0 ID=cds-WP_000617940.1;Parent=gene-CCO35_RS22950;Dbxref=GenBank:WP_000617940.1;Name=WP_000617940.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=CCO35_RS22950;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000617940.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 29572 30861 . - . ID=gene-CCO35_RS22955;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CCO35_RS22955;old_locus_tag=CCO35_22935 NZ_NPME01000011.1 Protein Homology CDS 29572 30861 . - 0 ID=cds-WP_000866780.1;Parent=gene-CCO35_RS22955;Dbxref=GenBank:WP_000866780.1;Name=WP_000866780.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=CCO35_RS22955;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866780.1;transl_table=11 NZ_NPME01000011.1 RefSeq gene 30877 32466 . - . ID=gene-CCO35_RS22960;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CCO35_RS22960;old_locus_tag=CCO35_22940 NZ_NPME01000011.1 Protein Homology CDS 30877 32466 . - 0 ID=cds-WP_001187520.1;Parent=gene-CCO35_RS22960;Dbxref=GenBank:WP_001187520.1;Name=WP_001187520.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=CCO35_RS22960;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187520.1;transl_table=11 ##sequence-region NZ_NPME01000012.1 1 26327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000012.1 RefSeq region 1 26327 . + . ID=NZ_NPME01000012.1:1..26327;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000012.1 RefSeq gene 299 853 . + . ID=gene-CCO35_RS22965;Name=CCO35_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22965;old_locus_tag=CCO35_22945 NZ_NPME01000012.1 Protein Homology CDS 299 853 . + 0 ID=cds-WP_001285635.1;Parent=gene-CCO35_RS22965;Dbxref=GenBank:WP_001285635.1;Name=WP_001285635.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=CCO35_RS22965;product=gamma carbonic anhydrase family protein;protein_id=WP_001285635.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 829 1086 . - . ID=gene-CCO35_RS22970;Name=CCO35_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22970;old_locus_tag=CCO35_22950 NZ_NPME01000012.1 Protein Homology CDS 829 1086 . - 0 ID=cds-WP_001070578.1;Parent=gene-CCO35_RS22970;Dbxref=GenBank:WP_001070578.1;Name=WP_001070578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=CCO35_RS22970;product=DUF1488 domain-containing protein;protein_id=WP_001070578.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 1083 1901 . - . ID=gene-CCO35_RS22975;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CCO35_RS22975;old_locus_tag=CCO35_22955 NZ_NPME01000012.1 Protein Homology CDS 1083 1901 . - 0 ID=cds-WP_000451203.1;Parent=gene-CCO35_RS22975;Dbxref=GenBank:WP_000451203.1;Name=WP_000451203.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=CCO35_RS22975;product=shikimate dehydrogenase;protein_id=WP_000451203.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 1906 2478 . - . ID=gene-CCO35_RS22980;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=CCO35_RS22980;old_locus_tag=CCO35_22960 NZ_NPME01000012.1 Protein Homology CDS 1906 2478 . - 0 ID=cds-WP_001063621.1;Parent=gene-CCO35_RS22980;Dbxref=GenBank:WP_001063621.1;Name=WP_001063621.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=CCO35_RS22980;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063621.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 2483 3025 . - . ID=gene-CCO35_RS22985;Name=CCO35_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22985;old_locus_tag=CCO35_22965 NZ_NPME01000012.1 Protein Homology CDS 2483 3025 . - 0 ID=cds-WP_001129708.1;Parent=gene-CCO35_RS22985;Dbxref=GenBank:WP_001129708.1;Name=WP_001129708.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=CCO35_RS22985;product=DNA topoisomerase family protein;protein_id=WP_001129708.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 3052 3525 . - . ID=gene-CCO35_RS22990;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=CCO35_RS22990;old_locus_tag=CCO35_22970 NZ_NPME01000012.1 Protein Homology CDS 3052 3525 . - 0 ID=cds-WP_000460663.1;Parent=gene-CCO35_RS22990;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=CCO35_RS22990;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 3497 4621 . - . ID=gene-CCO35_RS22995;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CCO35_RS22995;old_locus_tag=CCO35_22975 NZ_NPME01000012.1 Protein Homology CDS 3497 4621 . - 0 ID=cds-WP_001631020.1;Parent=gene-CCO35_RS22995;Dbxref=GenBank:WP_001631020.1;Name=WP_001631020.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=CCO35_RS22995;product=DNA-protecting protein DprA;protein_id=WP_001631020.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 4753 5262 . + . ID=gene-CCO35_RS23000;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CCO35_RS23000;old_locus_tag=CCO35_22980 NZ_NPME01000012.1 Protein Homology CDS 4753 5262 . + 0 ID=cds-WP_000114987.1;Parent=gene-CCO35_RS23000;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=CCO35_RS23000;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 5278 6225 . + . ID=gene-CCO35_RS23005;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CCO35_RS23005;old_locus_tag=CCO35_22985 NZ_NPME01000012.1 Protein Homology CDS 5278 6225 . + 0 ID=cds-WP_001285176.1;Parent=gene-CCO35_RS23005;Dbxref=GenBank:WP_001285176.1;Name=WP_001285176.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=CCO35_RS23005;product=methionyl-tRNA formyltransferase;protein_id=WP_001285176.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 6277 7566 . + . ID=gene-CCO35_RS23010;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CCO35_RS23010;old_locus_tag=CCO35_22990 NZ_NPME01000012.1 Protein Homology CDS 6277 7566 . + 0 ID=cds-WP_031571699.1;Parent=gene-CCO35_RS23010;Dbxref=GenBank:WP_031571699.1;Name=WP_031571699.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=CCO35_RS23010;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_031571699.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 7588 8964 . + . ID=gene-CCO35_RS23015;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=CCO35_RS23015;old_locus_tag=CCO35_22995 NZ_NPME01000012.1 Protein Homology CDS 7588 8964 . + 0 ID=cds-WP_000691374.1;Parent=gene-CCO35_RS23015;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=CCO35_RS23015;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 9106 9519 . + . ID=gene-CCO35_RS23020;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CCO35_RS23020;old_locus_tag=CCO35_23000 NZ_NPME01000012.1 Protein Homology CDS 9106 9519 . + 0 ID=cds-WP_000008119.1;Parent=gene-CCO35_RS23020;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=CCO35_RS23020;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11 NZ_NPME01000012.1 RefSeq pseudogene 9521 9724 . - . ID=gene-CCO35_RS23025;Name=CCO35_RS23025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23025;old_locus_tag=CCO35_23005;partial=true;pseudo=true;start_range=.,9521 NZ_NPME01000012.1 Protein Homology CDS 9521 9724 . - 0 ID=cds-CCO35_RS23025;Parent=gene-CCO35_RS23025;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=CCO35_RS23025;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;start_range=.,9521;transl_table=11 NZ_NPME01000012.1 RefSeq gene 9782 10207 . - . ID=gene-CCO35_RS23030;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=CCO35_RS23030;old_locus_tag=CCO35_23010 NZ_NPME01000012.1 Protein Homology CDS 9782 10207 . - 0 ID=cds-WP_000285585.1;Parent=gene-CCO35_RS23030;Dbxref=GenBank:WP_000285585.1;Name=WP_000285585.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=CCO35_RS23030;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285585.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 10218 10586 . - . ID=gene-CCO35_RS23035;Name=CCO35_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23035;old_locus_tag=CCO35_23015 NZ_NPME01000012.1 Protein Homology CDS 10218 10586 . - 0 ID=cds-WP_000266515.1;Parent=gene-CCO35_RS23035;Dbxref=GenBank:WP_000266515.1;Name=WP_000266515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=CCO35_RS23035;product=DUF1992 domain-containing protein;protein_id=WP_000266515.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 10694 11077 . - . ID=gene-CCO35_RS23040;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CCO35_RS23040;old_locus_tag=CCO35_23020 NZ_NPME01000012.1 Protein Homology CDS 10694 11077 . - 0 ID=cds-WP_001216370.1;Parent=gene-CCO35_RS23040;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=CCO35_RS23040;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 11118 12107 . - . ID=gene-CCO35_RS23045;Name=CCO35_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23045;old_locus_tag=CCO35_23025 NZ_NPME01000012.1 Protein Homology CDS 11118 12107 . - 0 ID=cds-WP_001162094.1;Parent=gene-CCO35_RS23045;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=CCO35_RS23045;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 12133 12753 . - . ID=gene-CCO35_RS23050;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CCO35_RS23050;old_locus_tag=CCO35_23030 NZ_NPME01000012.1 Protein Homology CDS 12133 12753 . - 0 ID=cds-WP_000135226.1;Parent=gene-CCO35_RS23050;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=CCO35_RS23050;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 12787 13176 . - . ID=gene-CCO35_RS23055;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CCO35_RS23055;old_locus_tag=CCO35_23035 NZ_NPME01000012.1 Protein Homology CDS 12787 13176 . - 0 ID=cds-WP_001029758.1;Parent=gene-CCO35_RS23055;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=CCO35_RS23055;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 13193 13549 . - . ID=gene-CCO35_RS23060;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CCO35_RS23060;old_locus_tag=CCO35_23040 NZ_NPME01000012.1 Protein Homology CDS 13193 13549 . - 0 ID=cds-WP_000090780.1;Parent=gene-CCO35_RS23060;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=CCO35_RS23060;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 13696 13812 . - . ID=gene-CCO35_RS23065;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CCO35_RS23065;old_locus_tag=CCO35_23045 NZ_NPME01000012.1 Protein Homology CDS 13696 13812 . - 0 ID=cds-WP_000868187.1;Parent=gene-CCO35_RS23065;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=CCO35_RS23065;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 13844 15175 . - . ID=gene-CCO35_RS23070;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CCO35_RS23070;old_locus_tag=CCO35_23050 NZ_NPME01000012.1 Protein Homology CDS 13844 15175 . - 0 ID=cds-WP_001118864.1;Parent=gene-CCO35_RS23070;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=CCO35_RS23070;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 15183 15617 . - . ID=gene-CCO35_RS23075;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CCO35_RS23075;old_locus_tag=CCO35_23055 NZ_NPME01000012.1 Protein Homology CDS 15183 15617 . - 0 ID=cds-WP_001238917.1;Parent=gene-CCO35_RS23075;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=CCO35_RS23075;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 15621 15800 . - . ID=gene-CCO35_RS23080;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CCO35_RS23080;old_locus_tag=CCO35_23060 NZ_NPME01000012.1 Protein Homology CDS 15621 15800 . - 0 ID=cds-WP_001140434.1;Parent=gene-CCO35_RS23080;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=CCO35_RS23080;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 15804 16307 . - . ID=gene-CCO35_RS23085;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CCO35_RS23085;old_locus_tag=CCO35_23065 NZ_NPME01000012.1 Protein Homology CDS 15804 16307 . - 0 ID=cds-WP_000940121.1;Parent=gene-CCO35_RS23085;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=CCO35_RS23085;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 16322 16675 . - . ID=gene-CCO35_RS23090;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CCO35_RS23090;old_locus_tag=CCO35_23070 NZ_NPME01000012.1 Protein Homology CDS 16322 16675 . - 0 ID=cds-WP_000358956.1;Parent=gene-CCO35_RS23090;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=CCO35_RS23090;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 16685 17218 . - . ID=gene-CCO35_RS23095;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CCO35_RS23095;old_locus_tag=CCO35_23075 NZ_NPME01000012.1 Protein Homology CDS 16685 17218 . - 0 ID=cds-WP_000091939.1;Parent=gene-CCO35_RS23095;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=CCO35_RS23095;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 17231 17623 . - . ID=gene-CCO35_RS23100;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CCO35_RS23100;old_locus_tag=CCO35_23080 NZ_NPME01000012.1 Protein Homology CDS 17231 17623 . - 0 ID=cds-WP_000062611.1;Parent=gene-CCO35_RS23100;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=CCO35_RS23100;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 17657 17962 . - . ID=gene-CCO35_RS23105;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CCO35_RS23105;old_locus_tag=CCO35_23085 NZ_NPME01000012.1 Protein Homology CDS 17657 17962 . - 0 ID=cds-WP_001118932.1;Parent=gene-CCO35_RS23105;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=CCO35_RS23105;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 17977 18516 . - . ID=gene-CCO35_RS23110;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CCO35_RS23110;old_locus_tag=CCO35_23090 NZ_NPME01000012.1 Protein Homology CDS 17977 18516 . - 0 ID=cds-WP_001096206.1;Parent=gene-CCO35_RS23110;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=CCO35_RS23110;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 18531 18845 . - . ID=gene-CCO35_RS23115;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CCO35_RS23115;old_locus_tag=CCO35_23095 NZ_NPME01000012.1 Protein Homology CDS 18531 18845 . - 0 ID=cds-WP_000729185.1;Parent=gene-CCO35_RS23115;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=CCO35_RS23115;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 18856 19227 . - . ID=gene-CCO35_RS23120;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CCO35_RS23120;old_locus_tag=CCO35_23100 NZ_NPME01000012.1 Protein Homology CDS 18856 19227 . - 0 ID=cds-WP_000613954.1;Parent=gene-CCO35_RS23120;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=CCO35_RS23120;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 19391 19645 . - . ID=gene-CCO35_RS23125;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CCO35_RS23125;old_locus_tag=CCO35_23105 NZ_NPME01000012.1 Protein Homology CDS 19391 19645 . - 0 ID=cds-WP_000130101.1;Parent=gene-CCO35_RS23125;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=CCO35_RS23125;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 19645 19836 . - . ID=gene-CCO35_RS23130;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CCO35_RS23130;old_locus_tag=CCO35_23110 NZ_NPME01000012.1 Protein Homology CDS 19645 19836 . - 0 ID=cds-WP_000644742.1;Parent=gene-CCO35_RS23130;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=CCO35_RS23130;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 19836 20246 . - . ID=gene-CCO35_RS23135;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CCO35_RS23135;old_locus_tag=CCO35_23115 NZ_NPME01000012.1 Protein Homology CDS 19836 20246 . - 0 ID=cds-WP_000941208.1;Parent=gene-CCO35_RS23135;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=CCO35_RS23135;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 20259 20960 . - . ID=gene-CCO35_RS23140;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CCO35_RS23140;old_locus_tag=CCO35_23120 NZ_NPME01000012.1 Protein Homology CDS 20259 20960 . - 0 ID=cds-WP_000529945.1;Parent=gene-CCO35_RS23140;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=CCO35_RS23140;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 20978 21310 . - . ID=gene-CCO35_RS23145;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CCO35_RS23145;old_locus_tag=CCO35_23125 NZ_NPME01000012.1 Protein Homology CDS 20978 21310 . - 0 ID=cds-WP_000447529.1;Parent=gene-CCO35_RS23145;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=CCO35_RS23145;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 21325 21603 . - . ID=gene-CCO35_RS23150;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CCO35_RS23150;old_locus_tag=CCO35_23130 NZ_NPME01000012.1 Protein Homology CDS 21325 21603 . - 0 ID=cds-WP_001138115.1;Parent=gene-CCO35_RS23150;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=CCO35_RS23150;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 21620 22441 . - . ID=gene-CCO35_RS23155;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CCO35_RS23155;old_locus_tag=CCO35_23135 NZ_NPME01000012.1 Protein Homology CDS 21620 22441 . - 0 ID=cds-WP_000301869.1;Parent=gene-CCO35_RS23155;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=CCO35_RS23155;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 22459 22761 . - . ID=gene-CCO35_RS23160;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CCO35_RS23160;old_locus_tag=CCO35_23140 NZ_NPME01000012.1 Protein Homology CDS 22459 22761 . - 0 ID=cds-WP_000617546.1;Parent=gene-CCO35_RS23160;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=CCO35_RS23160;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 22758 23363 . - . ID=gene-CCO35_RS23165;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CCO35_RS23165;old_locus_tag=CCO35_23145 NZ_NPME01000012.1 Protein Homology CDS 22758 23363 . - 0 ID=cds-WP_000424395.1;Parent=gene-CCO35_RS23165;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=CCO35_RS23165;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 23374 24003 . - . ID=gene-CCO35_RS23170;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CCO35_RS23170;old_locus_tag=CCO35_23150 NZ_NPME01000012.1 Protein Homology CDS 23374 24003 . - 0 ID=cds-WP_000579838.1;Parent=gene-CCO35_RS23170;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=CCO35_RS23170;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 24036 24347 . - . ID=gene-CCO35_RS23175;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CCO35_RS23175;old_locus_tag=CCO35_23155 NZ_NPME01000012.1 Protein Homology CDS 24036 24347 . - 0 ID=cds-WP_001181005.1;Parent=gene-CCO35_RS23175;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=CCO35_RS23175;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 24727 25194 . + . ID=gene-CCO35_RS23185;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=CCO35_RS23185;old_locus_tag=CCO35_23165 NZ_NPME01000012.1 Protein Homology CDS 24727 25194 . + 0 ID=cds-WP_000495848.1;Parent=gene-CCO35_RS23185;Dbxref=GenBank:WP_000495848.1;Name=WP_000495848.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=CCO35_RS23185;product=prepilin peptidase;protein_id=WP_000495848.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 25191 25667 . - . ID=gene-CCO35_RS23190;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=CCO35_RS23190;old_locus_tag=CCO35_23170 NZ_NPME01000012.1 Protein Homology CDS 25191 25667 . - 0 ID=cds-WP_000675530.1;Parent=gene-CCO35_RS23190;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=CCO35_RS23190;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11 NZ_NPME01000012.1 RefSeq gene 25740 25934 . - . ID=gene-CCO35_RS23195;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=CCO35_RS23195;old_locus_tag=CCO35_23175 NZ_NPME01000012.1 Protein Homology CDS 25740 25934 . - 0 ID=cds-WP_000289082.1;Parent=gene-CCO35_RS23195;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=CCO35_RS23195;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11 NZ_NPME01000012.1 RefSeq pseudogene 26119 26327 . - . ID=gene-CCO35_RS23210;Name=tuf;end_range=26327,.;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO35_RS23210;old_locus_tag=CCO35_23190;partial=true;pseudo=true NZ_NPME01000012.1 Protein Homology CDS 26119 26327 . - 2 ID=cds-CCO35_RS23210;Parent=gene-CCO35_RS23210;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=26327,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO35_RS23210;partial=true;product=elongation factor Tu;pseudo=true;transl_table=11 ##sequence-region NZ_NPME01000013.1 1 24926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000013.1 RefSeq region 1 24926 . + . ID=NZ_NPME01000013.1:1..24926;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000013.1 RefSeq gene 216 1865 . - . ID=gene-CCO35_RS23215;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=CCO35_RS23215;old_locus_tag=CCO35_23195 NZ_NPME01000013.1 Protein Homology CDS 216 1865 . - 0 ID=cds-WP_000790035.1;Parent=gene-CCO35_RS23215;Dbxref=GenBank:WP_000790035.1;Name=WP_000790035.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=CCO35_RS23215;product=glucose-6-phosphate isomerase;protein_id=WP_000790035.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 2253 3602 . + . ID=gene-CCO35_RS23220;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO35_RS23220;old_locus_tag=CCO35_23200 NZ_NPME01000013.1 Protein Homology CDS 2253 3602 . + 0 ID=cds-WP_000136392.1;Parent=gene-CCO35_RS23220;Dbxref=GenBank:WP_000136392.1;Name=WP_000136392.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=CCO35_RS23220;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136392.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 3979 5568 . + . ID=gene-CCO35_RS23230;Name=CCO35_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23230;old_locus_tag=CCO35_23210 NZ_NPME01000013.1 Protein Homology CDS 3979 5568 . + 0 ID=cds-WP_000716847.1;Parent=gene-CCO35_RS23230;Dbxref=GenBank:WP_000716847.1;Name=WP_000716847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716843.1;locus_tag=CCO35_RS23230;product=PTS sugar transporter;protein_id=WP_000716847.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 5592 6431 . + . ID=gene-CCO35_RS23235;Name=CCO35_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23235;old_locus_tag=CCO35_23215 NZ_NPME01000013.1 Protein Homology CDS 5592 6431 . + 0 ID=cds-WP_000472332.1;Parent=gene-CCO35_RS23235;Dbxref=GenBank:WP_000472332.1;Name=WP_000472332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472335.1;locus_tag=CCO35_RS23235;product=hypothetical protein;protein_id=WP_000472332.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 6448 7311 . + . ID=gene-CCO35_RS23240;Name=CCO35_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23240;old_locus_tag=CCO35_23220 NZ_NPME01000013.1 Protein Homology CDS 6448 7311 . + 0 ID=cds-WP_000924655.1;Parent=gene-CCO35_RS23240;Dbxref=GenBank:WP_000924655.1;Name=WP_000924655.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924639.1;locus_tag=CCO35_RS23240;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000924655.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 7298 8056 . + . ID=gene-CCO35_RS23245;Name=CCO35_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23245;old_locus_tag=CCO35_23225 NZ_NPME01000013.1 Protein Homology CDS 7298 8056 . + 0 ID=cds-WP_001068171.1;Parent=gene-CCO35_RS23245;Dbxref=GenBank:WP_001068171.1;Name=WP_001068171.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068167.1;locus_tag=CCO35_RS23245;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001068171.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 8267 8539 . + . ID=gene-CCO35_RS23255;Name=CCO35_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23255;old_locus_tag=CCO35_23235 NZ_NPME01000013.1 Protein Homology CDS 8267 8539 . + 0 ID=cds-WP_001207628.1;Parent=gene-CCO35_RS23255;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=CCO35_RS23255;product=DUF3811 domain-containing protein;protein_id=WP_001207628.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 8536 9405 . - . ID=gene-CCO35_RS23260;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=CCO35_RS23260;old_locus_tag=CCO35_23240 NZ_NPME01000013.1 Protein Homology CDS 8536 9405 . - 0 ID=cds-WP_000954618.1;Parent=gene-CCO35_RS23260;Dbxref=GenBank:WP_000954618.1;Name=WP_000954618.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=CCO35_RS23260;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954618.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 9452 9991 . - . ID=gene-CCO35_RS23265;Name=CCO35_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23265;old_locus_tag=CCO35_23245 NZ_NPME01000013.1 Protein Homology CDS 9452 9991 . - 0 ID=cds-WP_001096725.1;Parent=gene-CCO35_RS23265;Dbxref=GenBank:WP_001096725.1;Name=WP_001096725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=CCO35_RS23265;product=DUF2058 domain-containing protein;protein_id=WP_001096725.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 10026 10127 . - . ID=gene-CCO35_RS23270;Name=CCO35_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23270;old_locus_tag=CCO35_23250 NZ_NPME01000013.1 Protein Homology CDS 10026 10127 . - 0 ID=cds-WP_001541281.1;Parent=gene-CCO35_RS23270;Dbxref=GenBank:WP_001541281.1;Name=WP_001541281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=CCO35_RS23270;product=hypothetical protein;protein_id=WP_001541281.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 10199 10888 . + . ID=gene-CCO35_RS23275;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=CCO35_RS23275;old_locus_tag=CCO35_23255 NZ_NPME01000013.1 Protein Homology CDS 10199 10888 . + 0 ID=cds-WP_000421789.1;Parent=gene-CCO35_RS23275;Dbxref=GenBank:WP_000421789.1;Name=WP_000421789.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=CCO35_RS23275;product=dipeptidase PepE;protein_id=WP_000421789.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 10963 12594 . - . ID=gene-CCO35_RS23280;Name=CCO35_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23280;old_locus_tag=CCO35_23260 NZ_NPME01000013.1 Protein Homology CDS 10963 12594 . - 0 ID=cds-WP_000956811.1;Parent=gene-CCO35_RS23280;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=CCO35_RS23280;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 12861 16544 . - . ID=gene-CCO35_RS23285;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=CCO35_RS23285;old_locus_tag=CCO35_23265 NZ_NPME01000013.1 Protein Homology CDS 12861 16544 . - 0 ID=cds-WP_000095976.1;Parent=gene-CCO35_RS23285;Dbxref=GenBank:WP_000095976.1;Name=WP_000095976.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=CCO35_RS23285;product=methionine synthase;protein_id=WP_000095976.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 16851 17675 . + . ID=gene-CCO35_RS23290;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=CCO35_RS23290;old_locus_tag=CCO35_23270 NZ_NPME01000013.1 Protein Homology CDS 16851 17675 . + 0 ID=cds-WP_000226434.1;Parent=gene-CCO35_RS23290;Dbxref=GenBank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=CCO35_RS23290;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 17686 18093 . + . ID=gene-CCO35_RS23295;Name=CCO35_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23295;old_locus_tag=CCO35_23275 NZ_NPME01000013.1 Protein Homology CDS 17686 18093 . + 0 ID=cds-WP_077905741.1;Parent=gene-CCO35_RS23295;Dbxref=GenBank:WP_077905741.1;Name=WP_077905741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=CCO35_RS23295;product=ASCH domain-containing protein;protein_id=WP_077905741.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 18057 19808 . - . ID=gene-CCO35_RS23300;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=CCO35_RS23300;old_locus_tag=CCO35_23280 NZ_NPME01000013.1 Protein Homology CDS 18057 19808 . - 0 ID=cds-WP_001137277.1;Parent=gene-CCO35_RS23300;Dbxref=GenBank:WP_001137277.1;Name=WP_001137277.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=CCO35_RS23300;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137277.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 19910 21214 . - . ID=gene-CCO35_RS23305;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=CCO35_RS23305;old_locus_tag=CCO35_23285 NZ_NPME01000013.1 Protein Homology CDS 19910 21214 . - 0 ID=cds-WP_000857878.1;Parent=gene-CCO35_RS23305;Dbxref=GenBank:WP_000857878.1;Name=WP_000857878.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=CCO35_RS23305;product=isocitrate lyase;protein_id=WP_000857878.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 21246 22847 . - . ID=gene-CCO35_RS23310;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=CCO35_RS23310;old_locus_tag=CCO35_23290 NZ_NPME01000013.1 Protein Homology CDS 21246 22847 . - 0 ID=cds-WP_001069371.1;Parent=gene-CCO35_RS23310;Dbxref=GenBank:WP_001069371.1;Name=WP_001069371.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=CCO35_RS23310;product=malate synthase A;protein_id=WP_001069371.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 23116 24045 . - . ID=gene-CCO35_RS23315;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=CCO35_RS23315;old_locus_tag=CCO35_23295 NZ_NPME01000013.1 Protein Homology CDS 23116 24045 . - 0 ID=cds-WP_001122761.1;Parent=gene-CCO35_RS23315;Dbxref=GenBank:WP_001122761.1;Name=WP_001122761.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=CCO35_RS23315;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122761.1;transl_table=11 NZ_NPME01000013.1 RefSeq gene 24202 24639 . + . ID=gene-CCO35_RS23320;Name=CCO35_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23320;old_locus_tag=CCO35_23300 NZ_NPME01000013.1 Protein Homology CDS 24202 24639 . + 0 ID=cds-WP_000973248.1;Parent=gene-CCO35_RS23320;Dbxref=GenBank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=CCO35_RS23320;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11 ##sequence-region NZ_NPME01000014.1 1 7096 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000014.1 RefSeq region 1 7096 . + . ID=NZ_NPME01000014.1:1..7096;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000014.1 RefSeq gene 170 388 . - . ID=gene-CCO35_RS23330;Name=CCO35_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23330;old_locus_tag=CCO35_23310 NZ_NPME01000014.1 Protein Homology CDS 170 388 . - 0 ID=cds-WP_001152701.1;Parent=gene-CCO35_RS23330;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=CCO35_RS23330;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11 NZ_NPME01000014.1 RefSeq gene 608 1426 . + . ID=gene-CCO35_RS23335;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=CCO35_RS23335;old_locus_tag=CCO35_23315 NZ_NPME01000014.1 Protein Homology CDS 608 1426 . + 0 ID=cds-WP_000838225.1;Parent=gene-CCO35_RS23335;Dbxref=GenBank:WP_000838225.1;Name=WP_000838225.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=CCO35_RS23335;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838225.1;transl_table=11 NZ_NPME01000014.1 RefSeq gene 1703 2425 . + . ID=gene-CCO35_RS23340;Name=CCO35_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23340;old_locus_tag=CCO35_23320 NZ_NPME01000014.1 Protein Homology CDS 1703 2425 . + 0 ID=cds-WP_000091471.1;Parent=gene-CCO35_RS23340;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=CCO35_RS23340;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11 NZ_NPME01000014.1 RefSeq gene 2425 2811 . + . ID=gene-CCO35_RS23345;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=CCO35_RS23345;old_locus_tag=CCO35_23325 NZ_NPME01000014.1 Protein Homology CDS 2425 2811 . + 0 ID=cds-WP_001268010.1;Parent=gene-CCO35_RS23345;Dbxref=GenBank:WP_001268010.1;Name=WP_001268010.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=CCO35_RS23345;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268010.1;transl_table=11 NZ_NPME01000014.1 RefSeq gene 2811 3167 . + . ID=gene-CCO35_RS23350;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=CCO35_RS23350;old_locus_tag=CCO35_23330 NZ_NPME01000014.1 Protein Homology CDS 2811 3167 . + 0 ID=cds-WP_000820705.1;Parent=gene-CCO35_RS23350;Dbxref=GenBank:WP_000820705.1;Name=WP_000820705.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=CCO35_RS23350;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820705.1;transl_table=11 NZ_NPME01000014.1 RefSeq gene 3175 3462 . + . ID=gene-CCO35_RS23355;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=CCO35_RS23355;old_locus_tag=CCO35_23335 NZ_NPME01000014.1 Protein Homology CDS 3175 3462 . + 0 ID=cds-WP_000903398.1;Parent=gene-CCO35_RS23355;Dbxref=GenBank:WP_000903398.1;Name=WP_000903398.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=CCO35_RS23355;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903398.1;transl_table=11 NZ_NPME01000014.1 RefSeq gene 3588 3962 . + . ID=gene-CCO35_RS23360;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CCO35_RS23360;old_locus_tag=CCO35_23340 NZ_NPME01000014.1 Protein Homology CDS 3588 3962 . + 0 ID=cds-WP_000246815.1;Parent=gene-CCO35_RS23360;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=CCO35_RS23360;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_NPME01000014.1 RefSeq gene 4058 4528 . + . ID=gene-CCO35_RS23365;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CCO35_RS23365;old_locus_tag=CCO35_23345 NZ_NPME01000014.1 Protein Homology CDS 4058 4528 . + 0 ID=cds-WP_001138042.1;Parent=gene-CCO35_RS23365;Dbxref=GenBank:WP_001138042.1;Name=WP_001138042.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=CCO35_RS23365;product=30S ribosomal protein S7;protein_id=WP_001138042.1;transl_table=11 NZ_NPME01000014.1 RefSeq gene 4625 6739 . + . ID=gene-CCO35_RS23370;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CCO35_RS23370;old_locus_tag=CCO35_23350 NZ_NPME01000014.1 Protein Homology CDS 4625 6739 . + 0 ID=cds-WP_000124693.1;Parent=gene-CCO35_RS23370;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=CCO35_RS23370;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11 NZ_NPME01000014.1 RefSeq gene 6811 7096 . + . ID=gene-CCO35_RS23375;Name=CCO35_RS23375;end_range=7096,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23375;old_locus_tag=CCO35_23355;partial=true NZ_NPME01000014.1 Protein Homology CDS 6811 7096 . + 0 ID=cds-WP_000031682.1;Parent=gene-CCO35_RS23375;Dbxref=GenBank:WP_000031682.1;Name=WP_000031682.1;Ontology_term=GO:0003924,GO:0005525;end_range=7096,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO35_RS23375;partial=true;product=GTP-binding protein;protein_id=WP_000031682.1;transl_table=11 ##sequence-region NZ_NPME01000015.1 1 6149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000015.1 RefSeq region 1 6149 . + . ID=NZ_NPME01000015.1:1..6149;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000015.1 RefSeq gene 1 975 . - . ID=gene-CCO35_RS23380;Name=CCO35_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23380;old_locus_tag=CCO35_23360;partial=true;start_range=.,1 NZ_NPME01000015.1 Protein Homology CDS 1 975 . - 0 ID=cds-WP_094965386.1;Parent=gene-CCO35_RS23380;Dbxref=GenBank:WP_094965386.1;Name=WP_094965386.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=CCO35_RS23380;partial=true;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_094965386.1;start_range=.,1;transl_table=11 NZ_NPME01000015.1 RefSeq gene 972 1529 . - . ID=gene-CCO35_RS23385;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=CCO35_RS23385;old_locus_tag=CCO35_23365 NZ_NPME01000015.1 Protein Homology CDS 972 1529 . - 0 ID=cds-WP_000828293.1;Parent=gene-CCO35_RS23385;Dbxref=GenBank:WP_000828293.1;Name=WP_000828293.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=CCO35_RS23385;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828293.1;transl_table=11 NZ_NPME01000015.1 RefSeq gene 1526 3457 . - . ID=gene-CCO35_RS23390;Name=CCO35_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23390;old_locus_tag=CCO35_23370 NZ_NPME01000015.1 Protein Homology CDS 1526 3457 . - 0 ID=cds-WP_031571846.1;Parent=gene-CCO35_RS23390;Dbxref=GenBank:WP_031571846.1;Name=WP_031571846.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=CCO35_RS23390;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_031571846.1;transl_table=11 NZ_NPME01000015.1 RefSeq gene 3454 3933 . - . ID=gene-CCO35_RS23395;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=CCO35_RS23395;old_locus_tag=CCO35_23375 NZ_NPME01000015.1 Protein Homology CDS 3454 3933 . - 0 ID=cds-WP_001053601.1;Parent=gene-CCO35_RS23395;Dbxref=GenBank:WP_001053601.1;Name=WP_001053601.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=CCO35_RS23395;product=cytochrome c maturation protein CcmE;protein_id=WP_001053601.1;transl_table=11 NZ_NPME01000015.1 RefSeq gene 3930 4142 . - . ID=gene-CCO35_RS23400;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=CCO35_RS23400;old_locus_tag=CCO35_23380 NZ_NPME01000015.1 Protein Homology CDS 3930 4142 . - 0 ID=cds-WP_000074110.1;Parent=gene-CCO35_RS23400;Dbxref=GenBank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=CCO35_RS23400;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11 NZ_NPME01000015.1 RefSeq gene 4139 4876 . - . ID=gene-CCO35_RS23405;Name=CCO35_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23405;old_locus_tag=CCO35_23385 NZ_NPME01000015.1 Protein Homology CDS 4139 4876 . - 0 ID=cds-WP_031571853.1;Parent=gene-CCO35_RS23405;Dbxref=GenBank:WP_031571853.1;Name=WP_031571853.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO35_RS23405;product=heme ABC transporter permease;protein_id=WP_031571853.1;transl_table=11 NZ_NPME01000015.1 RefSeq gene 4928 5587 . - . ID=gene-CCO35_RS23410;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=CCO35_RS23410;old_locus_tag=CCO35_23390 NZ_NPME01000015.1 Protein Homology CDS 4928 5587 . - 0 ID=cds-WP_000990028.1;Parent=gene-CCO35_RS23410;Dbxref=GenBank:WP_000990028.1;Name=WP_000990028.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=CCO35_RS23410;product=heme exporter protein CcmB;protein_id=WP_000990028.1;transl_table=11 NZ_NPME01000015.1 RefSeq gene 5584 6149 . - . ID=gene-CCO35_RS23415;Name=ccmA;end_range=6149,.;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO35_RS23415;old_locus_tag=CCO35_23395;partial=true NZ_NPME01000015.1 Protein Homology CDS 5584 6149 . - 2 ID=cds-WP_031571857.1;Parent=gene-CCO35_RS23415;Dbxref=GenBank:WP_031571857.1;Name=WP_031571857.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;end_range=6149,.;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO35_RS23415;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_031571857.1;transl_table=11 ##sequence-region NZ_NPME01000016.1 1 4453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000016.1 RefSeq region 1 4453 . + . ID=NZ_NPME01000016.1:1..4453;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000016.1 RefSeq gene 1 277 . + . ID=gene-CCO35_RS24180;Name=CCO35_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24180;old_locus_tag=CCO35_23400;partial=true;start_range=.,1 NZ_NPME01000016.1 GeneMarkS-2+ CDS 1 277 . + 1 ID=cds-WP_219557300.1;Parent=gene-CCO35_RS24180;Dbxref=GenBank:WP_219557300.1;Name=WP_219557300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS24180;partial=true;product=hypothetical protein;protein_id=WP_219557300.1;start_range=.,1;transl_table=11 NZ_NPME01000016.1 RefSeq gene 237 1265 . + . ID=gene-CCO35_RS23425;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CCO35_RS23425;old_locus_tag=CCO35_23405 NZ_NPME01000016.1 Protein Homology CDS 237 1265 . + 0 ID=cds-WP_001016648.1;Parent=gene-CCO35_RS23425;Dbxref=GenBank:WP_001016648.1;Name=WP_001016648.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=CCO35_RS23425;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001016648.1;transl_table=11 NZ_NPME01000016.1 RefSeq gene 1262 2224 . + . ID=gene-CCO35_RS23430;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=CCO35_RS23430;old_locus_tag=CCO35_23410 NZ_NPME01000016.1 Protein Homology CDS 1262 2224 . + 0 ID=cds-WP_000655747.1;Parent=gene-CCO35_RS23430;Dbxref=GenBank:WP_000655747.1;Name=WP_000655747.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=CCO35_RS23430;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655747.1;transl_table=11 NZ_NPME01000016.1 RefSeq gene 2259 3209 . - . ID=gene-CCO35_RS23435;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=CCO35_RS23435;old_locus_tag=CCO35_23415 NZ_NPME01000016.1 Protein Homology CDS 2259 3209 . - 0 ID=cds-WP_000023067.1;Parent=gene-CCO35_RS23435;Dbxref=GenBank:WP_000023067.1;Name=WP_000023067.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=CCO35_RS23435;product=type I pantothenate kinase;protein_id=WP_000023067.1;transl_table=11 NZ_NPME01000016.1 RefSeq gene 3418 3591 . - . ID=gene-CCO35_RS23445;Name=CCO35_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23445;old_locus_tag=CCO35_23425 NZ_NPME01000016.1 Protein Homology CDS 3418 3591 . - 0 ID=cds-WP_001614935.1;Parent=gene-CCO35_RS23445;Dbxref=GenBank:WP_001614935.1;Name=WP_001614935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=CCO35_RS23445;product=hypothetical protein;protein_id=WP_001614935.1;transl_table=11 NZ_NPME01000016.1 RefSeq gene 3611 3686 . + . ID=gene-CCO35_RS23450;Name=CCO35_RS23450;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS23450;old_locus_tag=CCO35_23430 NZ_NPME01000016.1 tRNAscan-SE tRNA 3611 3686 . + . ID=rna-CCO35_RS23450;Parent=gene-CCO35_RS23450;anticodon=(pos:3644..3646);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23450;product=tRNA-Thr NZ_NPME01000016.1 tRNAscan-SE exon 3611 3686 . + . ID=exon-CCO35_RS23450-1;Parent=rna-CCO35_RS23450;anticodon=(pos:3644..3646);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23450;product=tRNA-Thr NZ_NPME01000016.1 RefSeq gene 3695 3779 . + . ID=gene-CCO35_RS23455;Name=CCO35_RS23455;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS23455;old_locus_tag=CCO35_23435 NZ_NPME01000016.1 tRNAscan-SE tRNA 3695 3779 . + . ID=rna-CCO35_RS23455;Parent=gene-CCO35_RS23455;anticodon=(pos:3729..3731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23455;product=tRNA-Tyr NZ_NPME01000016.1 tRNAscan-SE exon 3695 3779 . + . ID=exon-CCO35_RS23455-1;Parent=rna-CCO35_RS23455;anticodon=(pos:3729..3731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23455;product=tRNA-Tyr NZ_NPME01000016.1 RefSeq gene 3896 3970 . + . ID=gene-CCO35_RS23460;Name=CCO35_RS23460;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS23460;old_locus_tag=CCO35_23440 NZ_NPME01000016.1 tRNAscan-SE tRNA 3896 3970 . + . ID=rna-CCO35_RS23460;Parent=gene-CCO35_RS23460;anticodon=(pos:3929..3931);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23460;product=tRNA-Gly NZ_NPME01000016.1 tRNAscan-SE exon 3896 3970 . + . ID=exon-CCO35_RS23460-1;Parent=rna-CCO35_RS23460;anticodon=(pos:3929..3931);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23460;product=tRNA-Gly NZ_NPME01000016.1 RefSeq gene 3977 4052 . + . ID=gene-CCO35_RS23465;Name=CCO35_RS23465;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS23465;old_locus_tag=CCO35_23445 NZ_NPME01000016.1 tRNAscan-SE tRNA 3977 4052 . + . ID=rna-CCO35_RS23465;Parent=gene-CCO35_RS23465;anticodon=(pos:4010..4012);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23465;product=tRNA-Thr NZ_NPME01000016.1 tRNAscan-SE exon 3977 4052 . + . ID=exon-CCO35_RS23465-1;Parent=rna-CCO35_RS23465;anticodon=(pos:4010..4012);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23465;product=tRNA-Thr NZ_NPME01000016.1 RefSeq gene 4168 4453 . + . ID=gene-CCO35_RS23470;Name=CCO35_RS23470;end_range=4453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23470;old_locus_tag=CCO35_23450;partial=true NZ_NPME01000016.1 Protein Homology CDS 4168 4453 . + 0 ID=cds-WP_000031682.1-2;Parent=gene-CCO35_RS23470;Dbxref=GenBank:WP_000031682.1;Name=WP_000031682.1;Ontology_term=GO:0003924,GO:0005525;end_range=4453,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO35_RS23470;partial=true;product=GTP-binding protein;protein_id=WP_000031682.1;transl_table=11 ##sequence-region NZ_NPME01000017.1 1 1405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000017.1 RefSeq region 1 1405 . + . ID=NZ_NPME01000017.1:1..1405;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000017.1 RefSeq gene 25 1405 . - . ID=gene-CCO35_RS23475;Name=CCO35_RS23475;end_range=1405,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS23475;old_locus_tag=CCO35_23455;partial=true NZ_NPME01000017.1 cmsearch rRNA 25 1405 . - . ID=rna-CCO35_RS23475;Parent=gene-CCO35_RS23475;Dbxref=RFAM:RF02541;end_range=1405,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23475;partial=true;product=23S ribosomal RNA NZ_NPME01000017.1 cmsearch exon 25 1405 . - . ID=exon-CCO35_RS23475-1;Parent=rna-CCO35_RS23475;Dbxref=RFAM:RF02541;end_range=1405,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23475;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPME01000018.1 1 1312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000018.1 RefSeq region 1 1312 . + . ID=NZ_NPME01000018.1:1..1312;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000018.1 RefSeq gene 4 1259 . - . ID=gene-CCO35_RS23480;Name=CCO35_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23480;old_locus_tag=CCO35_23460 NZ_NPME01000018.1 Protein Homology CDS 908 1259 . - 0 ID=cds-WP_094965387.1;Parent=gene-CCO35_RS23480;Dbxref=GenBank:WP_094965387.1;Name=WP_094965387.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO35_RS23480;product=IS3-like element ISSen1 family transposase;protein_id=WP_094965387.1;transl_table=11 NZ_NPME01000018.1 Protein Homology CDS 4 908 . - 2 ID=cds-WP_094965387.1;Parent=gene-CCO35_RS23480;Dbxref=GenBank:WP_094965387.1;Name=WP_094965387.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO35_RS23480;product=IS3-like element ISSen1 family transposase;protein_id=WP_094965387.1;transl_table=11 ##sequence-region NZ_NPME01000019.1 1 1018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000019.1 RefSeq region 1 1018 . + . ID=NZ_NPME01000019.1:1..1018;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000019.1 RefSeq gene 18 1018 . + . ID=gene-CCO35_RS23485;Name=CCO35_RS23485;end_range=1018,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS23485;old_locus_tag=CCO35_23465;partial=true NZ_NPME01000019.1 cmsearch rRNA 18 1018 . + . ID=rna-CCO35_RS23485;Parent=gene-CCO35_RS23485;Dbxref=RFAM:RF00177;end_range=1018,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23485;partial=true;product=16S ribosomal RNA NZ_NPME01000019.1 cmsearch exon 18 1018 . + . ID=exon-CCO35_RS23485-1;Parent=rna-CCO35_RS23485;Dbxref=RFAM:RF00177;end_range=1018,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23485;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPME01000002.1 1 708945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000002.1 RefSeq region 1 708945 . + . ID=NZ_NPME01000002.1:1..708945;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000002.1 RefSeq gene 486 728 . + . ID=gene-CCO35_RS07335;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=CCO35_RS07335;old_locus_tag=CCO35_07330 NZ_NPME01000002.1 Protein Homology CDS 486 728 . + 0 ID=cds-WP_031569882.1;Parent=gene-CCO35_RS07335;Dbxref=GenBank:WP_031569882.1;Name=WP_031569882.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=CCO35_RS07335;product=exopolysaccharide production protein YjbE;protein_id=WP_031569882.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 792 1430 . + . ID=gene-CCO35_RS07340;Name=CCO35_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07340;old_locus_tag=CCO35_07335 NZ_NPME01000002.1 Protein Homology CDS 792 1430 . + 0 ID=cds-WP_000824809.1;Parent=gene-CCO35_RS07340;Dbxref=GenBank:WP_000824809.1;Name=WP_000824809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=CCO35_RS07340;product=YjbF family lipoprotein;protein_id=WP_000824809.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 1427 2164 . + . ID=gene-CCO35_RS07345;Name=CCO35_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07345;old_locus_tag=CCO35_07340 NZ_NPME01000002.1 Protein Homology CDS 1427 2164 . + 0 ID=cds-WP_000977974.1;Parent=gene-CCO35_RS07345;Dbxref=GenBank:WP_000977974.1;Name=WP_000977974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=CCO35_RS07345;product=capsule biosynthesis GfcC family protein;protein_id=WP_000977974.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 2164 4260 . + . ID=gene-CCO35_RS07350;Name=CCO35_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07350;old_locus_tag=CCO35_07345 NZ_NPME01000002.1 Protein Homology CDS 2164 4260 . + 0 ID=cds-WP_000750782.1;Parent=gene-CCO35_RS07350;Dbxref=GenBank:WP_000750782.1;Name=WP_000750782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=CCO35_RS07350;product=YjbH domain-containing protein;protein_id=WP_000750782.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 4403 4813 . + . ID=gene-CCO35_RS07355;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=CCO35_RS07355;old_locus_tag=CCO35_07350 NZ_NPME01000002.1 Protein Homology CDS 4403 4813 . + 0 ID=cds-WP_000982752.1;Parent=gene-CCO35_RS07355;Dbxref=GenBank:WP_000982752.1;Name=WP_000982752.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=CCO35_RS07355;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982752.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 4859 6333 . - . ID=gene-CCO35_RS07360;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=pseudogene;locus_tag=CCO35_RS07360;old_locus_tag=CCO35_07355;pseudo=true NZ_NPME01000002.1 Protein Homology CDS 4859 6333 . - 0 ID=cds-CCO35_RS07360;Parent=gene-CCO35_RS07360;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031675.1;locus_tag=CCO35_RS07360;product=D-xylose transporter XylE;pseudo=true;transl_table=11 NZ_NPME01000002.1 RefSeq gene 6653 7543 . - . ID=gene-CCO35_RS07365;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=CCO35_RS07365;old_locus_tag=CCO35_07360 NZ_NPME01000002.1 Protein Homology CDS 6653 7543 . - 0 ID=cds-WP_001252081.1;Parent=gene-CCO35_RS07365;Dbxref=GenBank:WP_001252081.1;Name=WP_001252081.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=CCO35_RS07365;product=maltose ABC transporter permease MalG;protein_id=WP_001252081.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 7558 9102 . - . ID=gene-CCO35_RS07370;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=CCO35_RS07370;old_locus_tag=CCO35_07365 NZ_NPME01000002.1 Protein Homology CDS 7558 9102 . - 0 ID=cds-WP_000382569.1;Parent=gene-CCO35_RS07370;Dbxref=GenBank:WP_000382569.1;Name=WP_000382569.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=CCO35_RS07370;product=maltose ABC transporter permease MalF;protein_id=WP_000382569.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 9145 9285 . + . ID=gene-CCO35_RS24300;Name=CCO35_RS24300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24300;partial=true;pseudo=true;start_range=.,9145 NZ_NPME01000002.1 Protein Homology CDS 9145 9285 . + 0 ID=cds-CCO35_RS24300;Parent=gene-CCO35_RS24300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO35_RS24300;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9145;transl_table=11 NZ_NPME01000002.1 RefSeq gene 9234 10424 . - . ID=gene-CCO35_RS07375;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=CCO35_RS07375;old_locus_tag=CCO35_07370 NZ_NPME01000002.1 Protein Homology CDS 9234 10424 . - 0 ID=cds-WP_000695415.1;Parent=gene-CCO35_RS07375;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=CCO35_RS07375;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 10786 11895 . + . ID=gene-CCO35_RS07380;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=CCO35_RS07380;old_locus_tag=CCO35_07375 NZ_NPME01000002.1 Protein Homology CDS 10786 11895 . + 0 ID=cds-WP_000179173.1;Parent=gene-CCO35_RS07380;Dbxref=GenBank:WP_000179173.1;Name=WP_000179173.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=CCO35_RS07380;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179173.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 11984 13342 . + . ID=gene-CCO35_RS07385;Name=CCO35_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07385;old_locus_tag=CCO35_07380 NZ_NPME01000002.1 Protein Homology CDS 11984 13342 . + 0 ID=cds-WP_000973678.1;Parent=gene-CCO35_RS07385;Dbxref=GenBank:WP_000973678.1;Name=WP_000973678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=CCO35_RS07385;product=maltoporin;protein_id=WP_000973678.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 13506 14423 . + . ID=gene-CCO35_RS07390;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=CCO35_RS07390;old_locus_tag=CCO35_07385 NZ_NPME01000002.1 Protein Homology CDS 13506 14423 . + 0 ID=cds-WP_000782494.1;Parent=gene-CCO35_RS07390;Dbxref=GenBank:WP_000782494.1;Name=WP_000782494.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=CCO35_RS07390;product=maltose operon protein MalM;protein_id=WP_000782494.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 14605 15102 . + . ID=gene-CCO35_RS07395;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=CCO35_RS07395;old_locus_tag=CCO35_07390 NZ_NPME01000002.1 Protein Homology CDS 14605 15102 . + 0 ID=cds-WP_000019217.1;Parent=gene-CCO35_RS07395;Dbxref=GenBank:WP_000019217.1;Name=WP_000019217.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=CCO35_RS07395;product=chorismate lyase;protein_id=WP_000019217.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 15116 15988 . + . ID=gene-CCO35_RS07400;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=CCO35_RS07400;old_locus_tag=CCO35_07395 NZ_NPME01000002.1 Protein Homology CDS 15116 15988 . + 0 ID=cds-WP_000455249.1;Parent=gene-CCO35_RS07400;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=CCO35_RS07400;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 16087 18507 . - . ID=gene-CCO35_RS07405;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=CCO35_RS07405;old_locus_tag=CCO35_07400 NZ_NPME01000002.1 Protein Homology CDS 16087 18507 . - 0 ID=cds-WP_000017358.1;Parent=gene-CCO35_RS07405;Dbxref=GenBank:WP_000017358.1;Name=WP_000017358.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=CCO35_RS07405;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017358.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 18678 19046 . + . ID=gene-CCO35_RS07410;Name=CCO35_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07410;old_locus_tag=CCO35_07405 NZ_NPME01000002.1 Protein Homology CDS 18678 19046 . + 0 ID=cds-WP_000002900.1;Parent=gene-CCO35_RS07410;Dbxref=GenBank:WP_000002900.1;Name=WP_000002900.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=CCO35_RS07410;product=diacylglycerol kinase;protein_id=WP_000002900.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 19155 19763 . + . ID=gene-CCO35_RS07415;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CCO35_RS07415;old_locus_tag=CCO35_07410 NZ_NPME01000002.1 Protein Homology CDS 19155 19763 . + 0 ID=cds-WP_000646079.1;Parent=gene-CCO35_RS07415;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=CCO35_RS07415;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 19942 21267 . + . ID=gene-CCO35_RS07420;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=CCO35_RS07420;old_locus_tag=CCO35_07415 NZ_NPME01000002.1 Protein Homology CDS 19942 21267 . + 0 ID=cds-WP_031569867.1;Parent=gene-CCO35_RS07420;Dbxref=GenBank:WP_031569867.1;Name=WP_031569867.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=CCO35_RS07420;product=MATE family efflux transporter DinF;protein_id=WP_031569867.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 21264 21377 . + . ID=gene-CCO35_RS07425;Name=CCO35_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07425;old_locus_tag=CCO35_07420 NZ_NPME01000002.1 Protein Homology CDS 21264 21377 . + 0 ID=cds-WP_001575282.1;Parent=gene-CCO35_RS07425;Dbxref=GenBank:WP_001575282.1;Name=WP_001575282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=CCO35_RS07425;product=hypothetical protein;protein_id=WP_001575282.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 21399 21608 . + . ID=gene-CCO35_RS07430;Name=CCO35_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07430;old_locus_tag=CCO35_07425 NZ_NPME01000002.1 Protein Homology CDS 21399 21608 . + 0 ID=cds-WP_001030592.1;Parent=gene-CCO35_RS07430;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=CCO35_RS07430;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 21708 22223 . - . ID=gene-CCO35_RS07435;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=CCO35_RS07435;old_locus_tag=CCO35_07430 NZ_NPME01000002.1 Protein Homology CDS 21708 22223 . - 0 ID=cds-WP_000416269.1;Parent=gene-CCO35_RS07435;Dbxref=GenBank:WP_000416269.1;Name=WP_000416269.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=CCO35_RS07435;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416269.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 22470 23780 . + . ID=gene-CCO35_RS07440;Name=CCO35_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07440;old_locus_tag=CCO35_07435 NZ_NPME01000002.1 Protein Homology CDS 22470 23780 . + 0 ID=cds-WP_001039335.1;Parent=gene-CCO35_RS07440;Dbxref=GenBank:WP_001039335.1;Name=WP_001039335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=CCO35_RS07440;product=conjugal transfer protein TraF;protein_id=WP_001039335.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 23868 24866 . + . ID=gene-CCO35_RS07445;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=CCO35_RS07445;old_locus_tag=CCO35_07440 NZ_NPME01000002.1 Protein Homology CDS 23868 24866 . + 0 ID=cds-WP_001182224.1;Parent=gene-CCO35_RS07445;Dbxref=GenBank:WP_001182224.1;Name=WP_001182224.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=CCO35_RS07445;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001182224.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 25034 25276 . + . ID=gene-CCO35_RS07450;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=CCO35_RS07450;old_locus_tag=CCO35_07445 NZ_NPME01000002.1 Protein Homology CDS 25034 25276 . + 0 ID=cds-WP_000891414.1;Parent=gene-CCO35_RS07450;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=CCO35_RS07450;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 25451 26434 . - . ID=gene-CCO35_RS07455;Name=CCO35_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07455;old_locus_tag=CCO35_07450 NZ_NPME01000002.1 Protein Homology CDS 25451 26434 . - 0 ID=cds-WP_000235555.1;Parent=gene-CCO35_RS07455;Dbxref=GenBank:WP_000235555.1;Name=WP_000235555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=CCO35_RS07455;product=quinone oxidoreductase;protein_id=WP_000235555.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 26499 27914 . + . ID=gene-CCO35_RS07460;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CCO35_RS07460;old_locus_tag=CCO35_07455 NZ_NPME01000002.1 Protein Homology CDS 26499 27914 . + 0 ID=cds-WP_000918353.1;Parent=gene-CCO35_RS07460;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=CCO35_RS07460;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 27946 29025 . + . ID=gene-CCO35_RS07465;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CCO35_RS07465;old_locus_tag=CCO35_07460 NZ_NPME01000002.1 Protein Homology CDS 27946 29025 . + 0 ID=cds-WP_001147297.1;Parent=gene-CCO35_RS07465;Dbxref=GenBank:WP_001147297.1;Name=WP_001147297.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=CCO35_RS07465;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 29211 30404 . + . ID=gene-CCO35_RS07470;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=CCO35_RS07470;old_locus_tag=CCO35_07465 NZ_NPME01000002.1 Protein Homology CDS 29211 30404 . + 0 ID=cds-WP_094965330.1;Parent=gene-CCO35_RS07470;Dbxref=GenBank:WP_094965330.1;Name=WP_094965330.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=CCO35_RS07470;product=aromatic amino acid transaminase;protein_id=WP_094965330.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 30591 31304 . + . ID=gene-CCO35_RS07475;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=CCO35_RS07475;old_locus_tag=CCO35_07470 NZ_NPME01000002.1 Protein Homology CDS 30591 31304 . + 0 ID=cds-WP_000724435.1;Parent=gene-CCO35_RS07475;Dbxref=GenBank:WP_000724435.1;Name=WP_000724435.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=CCO35_RS07475;product=acid phosphatase AphA;protein_id=WP_000724435.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 31433 31849 . + . ID=gene-CCO35_RS07480;Name=CCO35_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07480;old_locus_tag=CCO35_07475 NZ_NPME01000002.1 Protein Homology CDS 31433 31849 . + 0 ID=cds-WP_000270392.1;Parent=gene-CCO35_RS07480;Dbxref=GenBank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=CCO35_RS07480;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 31852 32208 . + . ID=gene-CCO35_RS07485;Name=CCO35_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07485;old_locus_tag=CCO35_07480 NZ_NPME01000002.1 Protein Homology CDS 31852 32208 . + 0 ID=cds-WP_000155665.1;Parent=gene-CCO35_RS07485;Dbxref=GenBank:WP_000155665.1;Name=WP_000155665.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=CCO35_RS07485;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155665.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 32209 32547 . - . ID=gene-CCO35_RS07490;Name=CCO35_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07490;old_locus_tag=CCO35_07485 NZ_NPME01000002.1 Protein Homology CDS 32209 32547 . - 0 ID=cds-WP_000146597.1;Parent=gene-CCO35_RS07490;Dbxref=GenBank:WP_000146597.1;Name=WP_000146597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=CCO35_RS07490;product=hypothetical protein;protein_id=WP_000146597.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 32534 32989 . - . ID=gene-CCO35_RS07495;Name=CCO35_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07495;old_locus_tag=CCO35_07490 NZ_NPME01000002.1 Protein Homology CDS 32534 32989 . - 0 ID=cds-WP_000432213.1;Parent=gene-CCO35_RS07495;Dbxref=GenBank:WP_000432213.1;Name=WP_000432213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=CCO35_RS07495;product=hypothetical protein;protein_id=WP_000432213.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 33121 35946 . - . ID=gene-CCO35_RS07500;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CCO35_RS07500;old_locus_tag=CCO35_07495 NZ_NPME01000002.1 Protein Homology CDS 33121 35946 . - 0 ID=cds-WP_000357725.1;Parent=gene-CCO35_RS07500;Dbxref=GenBank:WP_000357725.1;Name=WP_000357725.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=CCO35_RS07500;product=excinuclease ABC subunit UvrA;protein_id=WP_000357725.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 36194 36724 . + . ID=gene-CCO35_RS07510;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=CCO35_RS07510;old_locus_tag=CCO35_07505 NZ_NPME01000002.1 Protein Homology CDS 36194 36724 . + 0 ID=cds-WP_000168322.1;Parent=gene-CCO35_RS07510;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=CCO35_RS07510;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 37764 38396 . + . ID=gene-CCO35_RS07525;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=CCO35_RS07525;old_locus_tag=CCO35_07520 NZ_NPME01000002.1 Protein Homology CDS 37764 38396 . + 0 ID=cds-WP_000389240.1;Parent=gene-CCO35_RS07525;Dbxref=GenBank:WP_000389240.1;Name=WP_000389240.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=CCO35_RS07525;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389240.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 38393 39781 . + . ID=gene-CCO35_RS07530;Name=CCO35_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07530;old_locus_tag=CCO35_07525 NZ_NPME01000002.1 Protein Homology CDS 38393 39781 . + 0 ID=cds-WP_000875200.1;Parent=gene-CCO35_RS07530;Dbxref=GenBank:WP_000875200.1;Name=WP_000875200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=CCO35_RS07530;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_000875200.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 39771 41090 . + . ID=gene-CCO35_RS07535;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=CCO35_RS07535;old_locus_tag=CCO35_07530 NZ_NPME01000002.1 Protein Homology CDS 39771 41090 . + 0 ID=cds-WP_001749704.1;Parent=gene-CCO35_RS07535;Dbxref=GenBank:WP_001749704.1;Name=WP_001749704.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=CCO35_RS07535;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_001749704.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 41087 42364 . + . ID=gene-CCO35_RS07540;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=CCO35_RS07540;old_locus_tag=CCO35_07535 NZ_NPME01000002.1 Protein Homology CDS 41087 42364 . + 0 ID=cds-WP_001081935.1;Parent=gene-CCO35_RS07540;Dbxref=GenBank:WP_001081935.1;Name=WP_001081935.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=CCO35_RS07540;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081935.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 42381 59066 . + . ID=gene-CCO35_RS07545;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=CCO35_RS07545;old_locus_tag=CCO35_07540 NZ_NPME01000002.1 Protein Homology CDS 42381 59066 . + 0 ID=cds-WP_031569853.1;Parent=gene-CCO35_RS07545;Dbxref=GenBank:WP_031569853.1;Name=WP_031569853.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=CCO35_RS07545;product=non-fimbrial adhesin SiiE;protein_id=WP_031569853.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 59106 61172 . + . ID=gene-CCO35_RS07550;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=CCO35_RS07550;old_locus_tag=CCO35_07545 NZ_NPME01000002.1 Protein Homology CDS 59106 61172 . + 0 ID=cds-WP_000358574.1;Parent=gene-CCO35_RS07550;Dbxref=GenBank:WP_000358574.1;Name=WP_000358574.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=CCO35_RS07550;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_000358574.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 61450 61731 . - . ID=gene-CCO35_RS07555;Name=CCO35_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07555;old_locus_tag=CCO35_07550 NZ_NPME01000002.1 Protein Homology CDS 61450 61731 . - 0 ID=cds-WP_000719058.1;Parent=gene-CCO35_RS07555;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=CCO35_RS07555;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 62295 63896 . + . ID=gene-CCO35_RS07560;Name=CCO35_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07560;old_locus_tag=CCO35_07555 NZ_NPME01000002.1 Protein Homology CDS 62295 63896 . + 0 ID=cds-WP_000083658.1;Parent=gene-CCO35_RS07560;Dbxref=GenBank:WP_000083658.1;Name=WP_000083658.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=CCO35_RS07560;product=EAL domain-containing protein;protein_id=WP_000083658.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 63884 64207 . - . ID=gene-CCO35_RS07565;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=CCO35_RS07565;old_locus_tag=CCO35_07560 NZ_NPME01000002.1 Protein Homology CDS 63884 64207 . - 0 ID=cds-WP_000019483.1;Parent=gene-CCO35_RS07565;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=CCO35_RS07565;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 64294 64752 . + . ID=gene-CCO35_RS07570;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=CCO35_RS07570;old_locus_tag=CCO35_07565 NZ_NPME01000002.1 Protein Homology CDS 64294 64752 . + 0 ID=cds-WP_000412686.1;Parent=gene-CCO35_RS07570;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=CCO35_RS07570;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 65045 65713 . + . ID=gene-CCO35_RS07575;Name=CCO35_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07575;old_locus_tag=CCO35_07570 NZ_NPME01000002.1 Protein Homology CDS 65045 65713 . + 0 ID=cds-WP_000958575.1;Parent=gene-CCO35_RS07575;Dbxref=GenBank:WP_000958575.1;Name=WP_000958575.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=CCO35_RS07575;product=glutathione S-transferase family protein;protein_id=WP_000958575.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 66060 67409 . + . ID=gene-CCO35_RS07585;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=CCO35_RS07585;old_locus_tag=CCO35_07580 NZ_NPME01000002.1 Protein Homology CDS 66060 67409 . + 0 ID=cds-WP_000106907.1;Parent=gene-CCO35_RS07585;Dbxref=GenBank:WP_000106907.1;Name=WP_000106907.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=CCO35_RS07585;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106907.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 67559 69205 . + . ID=gene-CCO35_RS07595;Name=CCO35_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07595;old_locus_tag=CCO35_07590 NZ_NPME01000002.1 Protein Homology CDS 67559 69205 . + 0 ID=cds-WP_001542845.1;Parent=gene-CCO35_RS07595;Dbxref=GenBank:WP_001542845.1;Name=WP_001542845.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=CCO35_RS07595;product=Na+/H+ antiporter;protein_id=WP_001542845.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 69300 70187 . - . ID=gene-CCO35_RS07600;Name=CCO35_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07600;old_locus_tag=CCO35_07595 NZ_NPME01000002.1 Protein Homology CDS 69300 70187 . - 0 ID=cds-WP_000354962.1;Parent=gene-CCO35_RS07600;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=CCO35_RS07600;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 70291 70701 . + . ID=gene-CCO35_RS07605;Name=CCO35_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07605;old_locus_tag=CCO35_07600 NZ_NPME01000002.1 Protein Homology CDS 70291 70701 . + 0 ID=cds-WP_000257347.1;Parent=gene-CCO35_RS07605;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=CCO35_RS07605;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 70694 71383 . + . ID=gene-CCO35_RS07610;Name=CCO35_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07610;old_locus_tag=CCO35_07605 NZ_NPME01000002.1 Protein Homology CDS 70694 71383 . + 0 ID=cds-WP_001067096.1;Parent=gene-CCO35_RS07610;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=CCO35_RS07610;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 71422 73071 . - . ID=gene-CCO35_RS07615;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=CCO35_RS07615;old_locus_tag=CCO35_07610 NZ_NPME01000002.1 Protein Homology CDS 71422 73071 . - 0 ID=cds-WP_000832536.1;Parent=gene-CCO35_RS07615;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=CCO35_RS07615;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 73068 73382 . - . ID=gene-CCO35_RS07620;Name=CCO35_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07620;old_locus_tag=CCO35_07615 NZ_NPME01000002.1 Protein Homology CDS 73068 73382 . - 0 ID=cds-WP_000999620.1;Parent=gene-CCO35_RS07620;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=CCO35_RS07620;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 73622 75580 . - . ID=gene-CCO35_RS07625;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=CCO35_RS07625;old_locus_tag=CCO35_07620 NZ_NPME01000002.1 Protein Homology CDS 73622 75580 . - 0 ID=cds-WP_000083874.1;Parent=gene-CCO35_RS07625;Dbxref=GenBank:WP_000083874.1;Name=WP_000083874.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=CCO35_RS07625;product=acetate--CoA ligase;protein_id=WP_000083874.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 76012 77448 . + . ID=gene-CCO35_RS07635;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=CCO35_RS07635;old_locus_tag=CCO35_07630 NZ_NPME01000002.1 Protein Homology CDS 76012 77448 . + 0 ID=cds-WP_000101784.1;Parent=gene-CCO35_RS07635;Dbxref=GenBank:WP_000101784.1;Name=WP_000101784.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=CCO35_RS07635;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000101784.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 77493 78059 . + . ID=gene-CCO35_RS07640;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=CCO35_RS07640;old_locus_tag=CCO35_07635 NZ_NPME01000002.1 Protein Homology CDS 77493 78059 . + 0 ID=cds-WP_000115068.1;Parent=gene-CCO35_RS07640;Dbxref=GenBank:WP_000115068.1;Name=WP_000115068.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=CCO35_RS07640;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115068.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 78056 78727 . + . ID=gene-CCO35_RS07645;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=CCO35_RS07645;old_locus_tag=CCO35_07640 NZ_NPME01000002.1 Protein Homology CDS 78056 78727 . + 0 ID=cds-WP_001278032.1;Parent=gene-CCO35_RS07645;Dbxref=GenBank:WP_001278032.1;Name=WP_001278032.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=CCO35_RS07645;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278032.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 78724 79680 . + . ID=gene-CCO35_RS07650;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=CCO35_RS07650;old_locus_tag=CCO35_07645 NZ_NPME01000002.1 Protein Homology CDS 78724 79680 . + 0 ID=cds-WP_031569835.1;Parent=gene-CCO35_RS07650;Dbxref=GenBank:WP_031569835.1;Name=WP_031569835.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=CCO35_RS07650;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_031569835.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 79673 81409 . + . ID=gene-CCO35_RS07655;Name=CCO35_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07655;old_locus_tag=CCO35_07650 NZ_NPME01000002.1 Protein Homology CDS 79673 81409 . + 0 ID=cds-WP_031615756.1;Parent=gene-CCO35_RS07655;Dbxref=GenBank:WP_031615756.1;Name=WP_031615756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507453.1;locus_tag=CCO35_RS07655;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_031615756.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 81492 81911 . + . ID=gene-CCO35_RS24305;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=pseudogene;locus_tag=CCO35_RS24305;old_locus_tag=CCO35_07655;partial=true;pseudo=true;start_range=.,81492 NZ_NPME01000002.1 Protein Homology CDS 81492 81911 . + 0 ID=cds-CCO35_RS24305;Parent=gene-CCO35_RS24305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO35_RS24305;partial=true;product=heme lyase NrfEFG subunit NrfF;pseudo=true;start_range=.,81492;transl_table=11 NZ_NPME01000002.1 RefSeq gene 81908 82528 . + . ID=gene-CCO35_RS07665;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=CCO35_RS07665;old_locus_tag=CCO35_07660 NZ_NPME01000002.1 Protein Homology CDS 81908 82528 . + 0 ID=cds-WP_000083233.1;Parent=gene-CCO35_RS07665;Dbxref=GenBank:WP_000083233.1;Name=WP_000083233.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=CCO35_RS07665;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000083233.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 82873 84183 . + . ID=gene-CCO35_RS07670;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=CCO35_RS07670;old_locus_tag=CCO35_07665 NZ_NPME01000002.1 Protein Homology CDS 82873 84183 . + 0 ID=cds-WP_000793278.1;Parent=gene-CCO35_RS07670;Dbxref=GenBank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=CCO35_RS07670;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 84188 84264 . + . ID=gene-CCO35_RS24310;Name=CCO35_RS24310;end_range=84264,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24310;partial=true;pseudo=true;start_range=.,84188 NZ_NPME01000002.1 Protein Homology CDS 84188 84264 . + 0 ID=cds-CCO35_RS24310;Parent=gene-CCO35_RS24310;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=84264,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO35_RS24310;partial=true;product=hypothetical protein;pseudo=true;start_range=.,84188;transl_table=11 NZ_NPME01000002.1 RefSeq gene 84341 85030 . - . ID=gene-CCO35_RS07675;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=CCO35_RS07675;old_locus_tag=CCO35_07670 NZ_NPME01000002.1 Protein Homology CDS 84341 85030 . - 0 ID=cds-WP_000803307.1;Parent=gene-CCO35_RS07675;Dbxref=GenBank:WP_000803307.1;Name=WP_000803307.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=CCO35_RS07675;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000803307.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 85207 87354 . - . ID=gene-CCO35_RS07680;Name=CCO35_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07680;old_locus_tag=CCO35_07675 NZ_NPME01000002.1 Protein Homology CDS 85207 87354 . - 0 ID=cds-WP_011233236.1;Parent=gene-CCO35_RS07680;Dbxref=GenBank:WP_011233236.1;Name=WP_011233236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=CCO35_RS07680;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WP_011233236.1;transl_except=(pos:complement(86935..86937)%2Caa:Sec);transl_table=11 NZ_NPME01000002.1 RefSeq gene 87725 88633 . - . ID=gene-CCO35_RS07685;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=CCO35_RS07685;old_locus_tag=CCO35_07680 NZ_NPME01000002.1 Protein Homology CDS 87725 88633 . - 0 ID=cds-WP_000457033.1;Parent=gene-CCO35_RS07685;Dbxref=GenBank:WP_000457033.1;Name=WP_000457033.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=CCO35_RS07685;product=lipid A hydroxylase LpxO;protein_id=WP_000457033.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 88891 89325 . - . ID=gene-CCO35_RS07690;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=CCO35_RS07690;old_locus_tag=CCO35_07685 NZ_NPME01000002.1 Protein Homology CDS 88891 89325 . - 0 ID=cds-WP_001527229.1;Parent=gene-CCO35_RS07690;Dbxref=GenBank:WP_001527229.1;Name=WP_001527229.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=CCO35_RS07690;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001527229.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 89477 89920 . - . ID=gene-CCO35_RS07695;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=CCO35_RS07695;old_locus_tag=CCO35_07690 NZ_NPME01000002.1 Protein Homology CDS 89477 89920 . - 0 ID=cds-WP_001131298.1;Parent=gene-CCO35_RS07695;Dbxref=GenBank:WP_001131298.1;Name=WP_001131298.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=CCO35_RS07695;product=VOC family metalloprotein YjdN;protein_id=WP_001131298.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 90040 90375 . - . ID=gene-CCO35_RS07700;Name=CCO35_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07700;old_locus_tag=CCO35_07695 NZ_NPME01000002.1 Protein Homology CDS 90040 90375 . - 0 ID=cds-WP_000056482.1;Parent=gene-CCO35_RS07700;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=CCO35_RS07700;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 90843 92345 . + . ID=gene-CCO35_RS07705;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=CCO35_RS07705;old_locus_tag=CCO35_07700 NZ_NPME01000002.1 Protein Homology CDS 90843 92345 . + 0 ID=cds-WP_000919710.1;Parent=gene-CCO35_RS07705;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=CCO35_RS07705;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 92415 92504 . + . ID=gene-CCO35_RS07710;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=CCO35_RS07710;old_locus_tag=CCO35_07705 NZ_NPME01000002.1 Protein Homology CDS 92415 92504 . + 0 ID=cds-WP_000844399.1;Parent=gene-CCO35_RS07710;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=CCO35_RS07710;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 92512 93582 . - . ID=gene-CCO35_RS07715;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=CCO35_RS07715;old_locus_tag=CCO35_07710 NZ_NPME01000002.1 Protein Homology CDS 92512 93582 . - 0 ID=cds-WP_001212189.1;Parent=gene-CCO35_RS07715;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=CCO35_RS07715;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 93592 94260 . - . ID=gene-CCO35_RS07720;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=CCO35_RS07720;old_locus_tag=CCO35_07715 NZ_NPME01000002.1 Protein Homology CDS 93592 94260 . - 0 ID=cds-WP_000697899.1;Parent=gene-CCO35_RS07720;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=CCO35_RS07720;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 94257 95900 . - . ID=gene-CCO35_RS07725;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=CCO35_RS07725;old_locus_tag=CCO35_07720 NZ_NPME01000002.1 Protein Homology CDS 94257 95900 . - 0 ID=cds-WP_000919296.1;Parent=gene-CCO35_RS07725;Dbxref=GenBank:WP_000919296.1;Name=WP_000919296.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=CCO35_RS07725;product=phosphoethanolamine transferase EptA;protein_id=WP_000919296.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 96034 97371 . - . ID=gene-CCO35_RS07730;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=CCO35_RS07730;old_locus_tag=CCO35_07725 NZ_NPME01000002.1 Protein Homology CDS 96034 97371 . - 0 ID=cds-WP_000093130.1;Parent=gene-CCO35_RS07730;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=CCO35_RS07730;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 97511 98272 . - . ID=gene-CCO35_RS07735;Name=CCO35_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07735;old_locus_tag=CCO35_07730 NZ_NPME01000002.1 Protein Homology CDS 97511 98272 . - 0 ID=cds-WP_001217074.1;Parent=gene-CCO35_RS07735;Dbxref=GenBank:WP_001217074.1;Name=WP_001217074.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=CCO35_RS07735;product=AraC family transcriptional regulator;protein_id=WP_001217074.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 98570 100837 . - . ID=gene-CCO35_RS07740;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=CCO35_RS07740;old_locus_tag=CCO35_07735 NZ_NPME01000002.1 Protein Homology CDS 98570 100837 . - 0 ID=cds-WP_001542850.1;Parent=gene-CCO35_RS07740;Dbxref=GenBank:WP_001542850.1;Name=WP_001542850.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=CCO35_RS07740;product=arginine decarboxylase;protein_id=WP_001542850.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 101070 102002 . - . ID=gene-CCO35_RS07745;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=CCO35_RS07745;old_locus_tag=CCO35_07740 NZ_NPME01000002.1 Protein Homology CDS 101070 102002 . - 0 ID=cds-WP_000106992.1;Parent=gene-CCO35_RS07745;Dbxref=GenBank:WP_000106992.1;Name=WP_000106992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=CCO35_RS07745;product=transcriptional regulator MelR;protein_id=WP_000106992.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 102271 103626 . + . ID=gene-CCO35_RS07750;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=CCO35_RS07750;old_locus_tag=CCO35_07745 NZ_NPME01000002.1 Protein Homology CDS 102271 103626 . + 0 ID=cds-WP_001615029.1;Parent=gene-CCO35_RS07750;Dbxref=GenBank:WP_001615029.1;Name=WP_001615029.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=CCO35_RS07750;product=alpha-galactosidase;protein_id=WP_001615029.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 103710 105140 . + . ID=gene-CCO35_RS07755;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CCO35_RS07755;old_locus_tag=CCO35_07750 NZ_NPME01000002.1 Protein Homology CDS 103710 105140 . + 0 ID=cds-WP_000028070.1;Parent=gene-CCO35_RS07755;Dbxref=GenBank:WP_000028070.1;Name=WP_000028070.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=CCO35_RS07755;product=melibiose:sodium transporter MelB;protein_id=WP_000028070.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 105229 106875 . - . ID=gene-CCO35_RS07760;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=CCO35_RS07760;old_locus_tag=CCO35_07755 NZ_NPME01000002.1 Protein Homology CDS 105229 106875 . - 0 ID=cds-WP_031569809.1;Parent=gene-CCO35_RS07760;Dbxref=GenBank:WP_031569809.1;Name=WP_031569809.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=CCO35_RS07760;product=class I fumarate hydratase FumA;protein_id=WP_031569809.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 106971 108311 . - . ID=gene-CCO35_RS07765;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=CCO35_RS07765;old_locus_tag=CCO35_07760 NZ_NPME01000002.1 Protein Homology CDS 106971 108311 . - 0 ID=cds-WP_000899149.1;Parent=gene-CCO35_RS07765;Dbxref=GenBank:WP_000899149.1;Name=WP_000899149.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=CCO35_RS07765;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899149.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 108458 108724 . - . ID=gene-CCO35_RS07770;Name=CCO35_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07770;old_locus_tag=CCO35_07765 NZ_NPME01000002.1 Protein Homology CDS 108458 108724 . - 0 ID=cds-WP_001642024.1;Parent=gene-CCO35_RS07770;Dbxref=GenBank:WP_001642024.1;Name=WP_001642024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=CCO35_RS07770;product=hypothetical protein;protein_id=WP_001642024.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 109041 109760 . - . ID=gene-CCO35_RS07775;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=CCO35_RS07775;old_locus_tag=CCO35_07770 NZ_NPME01000002.1 Protein Homology CDS 109041 109760 . - 0 ID=cds-WP_000611307.1;Parent=gene-CCO35_RS07775;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=CCO35_RS07775;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 109757 111388 . - . ID=gene-CCO35_RS07780;Name=CCO35_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07780;old_locus_tag=CCO35_07775 NZ_NPME01000002.1 Protein Homology CDS 109757 111388 . - 0 ID=cds-WP_000682906.1;Parent=gene-CCO35_RS07780;Dbxref=GenBank:WP_000682906.1;Name=WP_000682906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=CCO35_RS07780;product=sensor histidine kinase;protein_id=WP_000682906.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 111763 114192 . + . ID=gene-CCO35_RS07785;Name=CCO35_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07785;old_locus_tag=CCO35_07780 NZ_NPME01000002.1 Protein Homology CDS 111763 114192 . + 0 ID=cds-WP_031569804.1;Parent=gene-CCO35_RS07785;Dbxref=GenBank:WP_031569804.1;Name=WP_031569804.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=CCO35_RS07785;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_031569804.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 114206 114832 . + . ID=gene-CCO35_RS07790;Name=CCO35_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07790;old_locus_tag=CCO35_07785 NZ_NPME01000002.1 Protein Homology CDS 114206 114832 . + 0 ID=cds-WP_000816143.1;Parent=gene-CCO35_RS07790;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=CCO35_RS07790;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 114825 115598 . + . ID=gene-CCO35_RS07795;Name=CCO35_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07795;old_locus_tag=CCO35_07790 NZ_NPME01000002.1 Protein Homology CDS 114825 115598 . + 0 ID=cds-WP_000544926.1;Parent=gene-CCO35_RS07795;Dbxref=GenBank:WP_000544926.1;Name=WP_000544926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=CCO35_RS07795;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544926.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 115674 116267 . + . ID=gene-CCO35_RS07800;Name=CCO35_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07800;old_locus_tag=CCO35_07795 NZ_NPME01000002.1 Protein Homology CDS 115674 116267 . + 0 ID=cds-WP_001542855.1;Parent=gene-CCO35_RS07800;Dbxref=GenBank:WP_001542855.1;Name=WP_001542855.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=CCO35_RS07800;product=TorD/DmsD family molecular chaperone;protein_id=WP_001542855.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 116351 117751 . - . ID=gene-CCO35_RS07805;Name=CCO35_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07805;old_locus_tag=CCO35_07800 NZ_NPME01000002.1 Protein Homology CDS 116351 117751 . - 0 ID=cds-WP_000773787.1;Parent=gene-CCO35_RS07805;Dbxref=GenBank:WP_000773787.1;Name=WP_000773787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=CCO35_RS07805;product=DUF7594 domain-containing protein;protein_id=WP_000773787.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 118055 118960 . + . ID=gene-CCO35_RS07810;Name=CCO35_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07810;old_locus_tag=CCO35_07805 NZ_NPME01000002.1 Protein Homology CDS 118055 118960 . + 0 ID=cds-WP_001268209.1;Parent=gene-CCO35_RS07810;Dbxref=GenBank:WP_001268209.1;Name=WP_001268209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=CCO35_RS07810;product=SdiA-regulated domain-containing protein;protein_id=WP_001268209.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 119255 119389 . - . ID=gene-CCO35_RS23985;Name=CCO35_RS23985;end_range=119389,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23985;partial=true;pseudo=true NZ_NPME01000002.1 Protein Homology CDS 119255 119389 . - 0 ID=cds-CCO35_RS23985;Parent=gene-CCO35_RS23985;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=119389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=CCO35_RS23985;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 119499 119598 . - . ID=gene-CCO35_RS23990;Name=CCO35_RS23990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23990;partial=true;pseudo=true;start_range=.,119499 NZ_NPME01000002.1 Protein Homology CDS 119499 119598 . - 0 ID=cds-CCO35_RS23990;Parent=gene-CCO35_RS23990;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=CCO35_RS23990;partial=true;product=hypothetical protein;pseudo=true;start_range=.,119499;transl_table=11 NZ_NPME01000002.1 RefSeq gene 119618 119800 . + . ID=gene-CCO35_RS23995;Name=CCO35_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23995;old_locus_tag=CCO35_07810 NZ_NPME01000002.1 Protein Homology CDS 119618 119800 . + 0 ID=cds-WP_001527266.1;Parent=gene-CCO35_RS23995;Dbxref=GenBank:WP_001527266.1;Name=WP_001527266.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=CCO35_RS23995;product=ATP-binding cassette domain-containing protein;protein_id=WP_001527266.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 119793 120080 . - . ID=gene-CCO35_RS07820;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=CCO35_RS07820;old_locus_tag=CCO35_07815 NZ_NPME01000002.1 Protein Homology CDS 119793 120080 . - 0 ID=cds-WP_001269916.1;Parent=gene-CCO35_RS07820;Dbxref=GenBank:WP_001269916.1;Name=WP_001269916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=CCO35_RS07820;product=transcriptional regulator RtsB;protein_id=WP_001269916.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 120077 120952 . - . ID=gene-CCO35_RS07825;Name=CCO35_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07825;old_locus_tag=CCO35_07820 NZ_NPME01000002.1 Protein Homology CDS 120077 120952 . - 0 ID=cds-WP_000921676.1;Parent=gene-CCO35_RS07825;Dbxref=GenBank:WP_000921676.1;Name=WP_000921676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=CCO35_RS07825;product=AraC family transcriptional regulator;protein_id=WP_000921676.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 121216 121438 . - . ID=gene-CCO35_RS24000;Name=CCO35_RS24000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24000;pseudo=true NZ_NPME01000002.1 Protein Homology CDS 121216 121438 . - 0 ID=cds-CCO35_RS24000;Parent=gene-CCO35_RS24000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=CCO35_RS24000;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000002.1 RefSeq gene 121755 122048 . + . ID=gene-CCO35_RS07830;Name=CCO35_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07830;old_locus_tag=CCO35_07825 NZ_NPME01000002.1 Protein Homology CDS 121755 122048 . + 0 ID=cds-WP_001110450.1;Parent=gene-CCO35_RS07830;Dbxref=GenBank:WP_001110450.1;Name=WP_001110450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=CCO35_RS07830;product=DUF1778 domain-containing protein;protein_id=WP_001110450.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 122045 122536 . + . ID=gene-CCO35_RS07835;Name=CCO35_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07835;old_locus_tag=CCO35_07830 NZ_NPME01000002.1 Protein Homology CDS 122045 122536 . + 0 ID=cds-WP_000625912.1;Parent=gene-CCO35_RS07835;Dbxref=GenBank:WP_000625912.1;Name=WP_000625912.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=CCO35_RS07835;product=GNAT family N-acetyltransferase;protein_id=WP_000625912.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 122751 122999 . + . ID=gene-CCO35_RS07840;Name=CCO35_RS07840;end_range=122999,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS07840;old_locus_tag=CCO35_07835;partial=true;pseudo=true;start_range=.,122751 NZ_NPME01000002.1 Protein Homology CDS 122751 122999 . + 0 ID=cds-CCO35_RS07840;Parent=gene-CCO35_RS07840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=122999,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011920327.1;locus_tag=CCO35_RS07840;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,122751;transl_table=11 NZ_NPME01000002.1 RefSeq gene 123274 123501 . - . ID=gene-CCO35_RS07845;Name=CCO35_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07845;old_locus_tag=CCO35_07840 NZ_NPME01000002.1 Protein Homology CDS 123274 123501 . - 0 ID=cds-WP_001112992.1;Parent=gene-CCO35_RS07845;Dbxref=GenBank:WP_001112992.1;Name=WP_001112992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112995.1;locus_tag=CCO35_RS07845;product=hypothetical protein;protein_id=WP_001112992.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 124088 124378 . + . ID=gene-CCO35_RS07850;Name=CCO35_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07850;old_locus_tag=CCO35_07845 NZ_NPME01000002.1 Protein Homology CDS 124088 124378 . + 0 ID=cds-WP_000773469.1;Parent=gene-CCO35_RS07850;Dbxref=GenBank:WP_000773469.1;Name=WP_000773469.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000773469.1;locus_tag=CCO35_RS07850;product=PapB/FocB family fimbrial expression transcriptional regulator;protein_id=WP_000773469.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 124413 124952 . + . ID=gene-CCO35_RS07855;Name=CCO35_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07855;old_locus_tag=CCO35_07850 NZ_NPME01000002.1 Protein Homology CDS 124413 124952 . + 0 ID=cds-WP_000721295.1;Parent=gene-CCO35_RS07855;Dbxref=GenBank:WP_000721295.1;Name=WP_000721295.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000721294.1;locus_tag=CCO35_RS07855;product=fimbrial protein;protein_id=WP_000721295.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 124962 127400 . + . ID=gene-CCO35_RS07860;Name=faeD;gbkey=Gene;gene=faeD;gene_biotype=protein_coding;locus_tag=CCO35_RS07860;old_locus_tag=CCO35_07855 NZ_NPME01000002.1 Protein Homology CDS 124962 127400 . + 0 ID=cds-WP_031569791.1;Parent=gene-CCO35_RS07860;Dbxref=GenBank:WP_031569791.1;Name=WP_031569791.1;gbkey=CDS;gene=faeD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001014136.1;locus_tag=CCO35_RS07860;product=F4 (K88) fimbrial usher FaeD;protein_id=WP_031569791.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 127423 128214 . + . ID=gene-CCO35_RS07865;Name=CCO35_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07865;old_locus_tag=CCO35_07860 NZ_NPME01000002.1 Protein Homology CDS 127423 128214 . + 0 ID=cds-WP_024147084.1;Parent=gene-CCO35_RS07865;Dbxref=GenBank:WP_024147084.1;Name=WP_024147084.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518563.1;locus_tag=CCO35_RS07865;product=fimbria/pilus periplasmic chaperone;protein_id=WP_024147084.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 128250 128741 . + . ID=gene-CCO35_RS07870;Name=CCO35_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07870;old_locus_tag=CCO35_07865 NZ_NPME01000002.1 Protein Homology CDS 128250 128741 . + 0 ID=cds-WP_023215134.1;Parent=gene-CCO35_RS07870;Dbxref=GenBank:WP_023215134.1;Name=WP_023215134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000709797.1;locus_tag=CCO35_RS07870;product=DUF5462 family protein;protein_id=WP_023215134.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 128959 129738 . + . ID=gene-CCO35_RS07875;Name=CCO35_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07875;old_locus_tag=CCO35_07870 NZ_NPME01000002.1 Protein Homology CDS 128959 129738 . + 0 ID=cds-WP_023253737.1;Parent=gene-CCO35_RS07875;Dbxref=GenBank:WP_023253737.1;Name=WP_023253737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723900.1;locus_tag=CCO35_RS07875;product=K88 fimbrial protein AC;protein_id=WP_023253737.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 129957 130754 . + . ID=gene-CCO35_RS07880;Name=faeH;gbkey=Gene;gene=faeH;gene_biotype=protein_coding;locus_tag=CCO35_RS07880;old_locus_tag=CCO35_07875 NZ_NPME01000002.1 Protein Homology CDS 129957 130754 . + 0 ID=cds-WP_000704723.1;Parent=gene-CCO35_RS07880;Dbxref=GenBank:WP_000704723.1;Name=WP_000704723.1;gbkey=CDS;gene=faeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704720.1;locus_tag=CCO35_RS07880;product=F4 (K88) fimbria minor subunit FaeH;protein_id=WP_000704723.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 130782 131546 . + . ID=gene-CCO35_RS07885;Name=CCO35_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07885;old_locus_tag=CCO35_07880 NZ_NPME01000002.1 Protein Homology CDS 130782 131546 . + 0 ID=cds-WP_031569777.1;Parent=gene-CCO35_RS07885;Dbxref=GenBank:WP_031569777.1;Name=WP_031569777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000827659.1;locus_tag=CCO35_RS07885;product=fimbrial protein;protein_id=WP_031569777.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 131967 132551 . + . ID=gene-CCO35_RS07895;Name=CCO35_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07895;old_locus_tag=CCO35_07890 NZ_NPME01000002.1 Protein Homology CDS 131967 132551 . + 0 ID=cds-WP_031569774.1;Parent=gene-CCO35_RS07895;Dbxref=GenBank:WP_031569774.1;Name=WP_031569774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=CCO35_RS07895;product=hypothetical protein;protein_id=WP_031569774.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 132624 132836 . + . ID=gene-CCO35_RS07900;Name=CCO35_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07900;old_locus_tag=CCO35_07895 NZ_NPME01000002.1 Protein Homology CDS 132624 132836 . + 0 ID=cds-WP_000063794.1;Parent=gene-CCO35_RS07900;Dbxref=GenBank:WP_000063794.1;Name=WP_000063794.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063796.1;locus_tag=CCO35_RS07900;product=FaeA/PapI family transcriptional regulator;protein_id=WP_000063794.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 133097 133258 . + . ID=gene-CCO35_RS23800;Name=CCO35_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23800 NZ_NPME01000002.1 GeneMarkS-2+ CDS 133097 133258 . + 0 ID=cds-WP_001816720.1;Parent=gene-CCO35_RS23800;Dbxref=GenBank:WP_001816720.1;Name=WP_001816720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS23800;product=hypothetical protein;protein_id=WP_001816720.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 133284 134132 . + . ID=gene-CCO35_RS07905;Name=CCO35_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07905;old_locus_tag=CCO35_07900 NZ_NPME01000002.1 Protein Homology CDS 133284 134132 . + 0 ID=cds-WP_031569771.1;Parent=gene-CCO35_RS07905;Dbxref=GenBank:WP_031569771.1;Name=WP_031569771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=CCO35_RS07905;product=SdiA-regulated domain-containing protein;protein_id=WP_031569771.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 134277 135029 . - . ID=gene-CCO35_RS07910;Name=CCO35_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07910;old_locus_tag=CCO35_07905 NZ_NPME01000002.1 Protein Homology CDS 134277 135029 . - 0 ID=cds-WP_000842407.1;Parent=gene-CCO35_RS07910;Dbxref=GenBank:WP_000842407.1;Name=WP_000842407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=CCO35_RS07910;product=non-specific acid phosphatase;protein_id=WP_000842407.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 135585 135659 . + . ID=gene-CCO35_RS07915;Name=CCO35_RS07915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS07915;old_locus_tag=CCO35_07910;partial=true;pseudo=true;start_range=.,135585 NZ_NPME01000002.1 Protein Homology CDS 135585 135659 . + 0 ID=cds-CCO35_RS07915;Parent=gene-CCO35_RS07915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=CCO35_RS07915;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,135585;transl_table=11 NZ_NPME01000002.1 RefSeq gene 135739 135814 . - . ID=gene-CCO35_RS07920;Name=CCO35_RS07920;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS07920;old_locus_tag=CCO35_07915 NZ_NPME01000002.1 tRNAscan-SE tRNA 135739 135814 . - . ID=rna-CCO35_RS07920;Parent=gene-CCO35_RS07920;anticodon=(pos:complement(135779..135781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS07920;product=tRNA-Phe NZ_NPME01000002.1 tRNAscan-SE exon 135739 135814 . - . ID=exon-CCO35_RS07920-1;Parent=rna-CCO35_RS07920;anticodon=(pos:complement(135779..135781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS07920;product=tRNA-Phe NZ_NPME01000002.1 RefSeq gene 135930 136505 . - . ID=gene-CCO35_RS07925;Name=CCO35_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07925;old_locus_tag=CCO35_07920 NZ_NPME01000002.1 Protein Homology CDS 135930 136505 . - 0 ID=cds-WP_001188509.1;Parent=gene-CCO35_RS07925;Dbxref=GenBank:WP_001188509.1;Name=WP_001188509.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=CCO35_RS07925;product=transcriptional regulator;protein_id=WP_001188509.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 136542 138245 . - . ID=gene-CCO35_RS07930;Name=CCO35_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07930;old_locus_tag=CCO35_07925 NZ_NPME01000002.1 Protein Homology CDS 136542 138245 . - 0 ID=cds-WP_000068889.1;Parent=gene-CCO35_RS07930;Dbxref=GenBank:WP_000068889.1;Name=WP_000068889.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=CCO35_RS07930;product=protein-disulfide reductase DsbD;protein_id=WP_000068889.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 138221 138568 . - . ID=gene-CCO35_RS07935;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=CCO35_RS07935;old_locus_tag=CCO35_07930 NZ_NPME01000002.1 Protein Homology CDS 138221 138568 . - 0 ID=cds-WP_000887832.1;Parent=gene-CCO35_RS07935;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=CCO35_RS07935;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 138689 139990 . - . ID=gene-CCO35_RS07940;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=CCO35_RS07940;old_locus_tag=CCO35_07935 NZ_NPME01000002.1 Protein Homology CDS 138689 139990 . - 0 ID=cds-WP_000637595.1;Parent=gene-CCO35_RS07940;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=CCO35_RS07940;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 140105 141541 . - . ID=gene-CCO35_RS07945;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=CCO35_RS07945;old_locus_tag=CCO35_07940 NZ_NPME01000002.1 Protein Homology CDS 140105 141541 . - 0 ID=cds-WP_000069440.1;Parent=gene-CCO35_RS07945;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=CCO35_RS07945;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 141882 142358 . + . ID=gene-CCO35_RS07950;Name=CCO35_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07950;old_locus_tag=CCO35_07945 NZ_NPME01000002.1 Protein Homology CDS 141882 142358 . + 0 ID=cds-WP_001267291.1;Parent=gene-CCO35_RS07950;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=CCO35_RS07950;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 142417 143658 . - . ID=gene-CCO35_RS07955;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=CCO35_RS07955;old_locus_tag=CCO35_07950 NZ_NPME01000002.1 Protein Homology CDS 142417 143658 . - 0 ID=cds-WP_023136358.1;Parent=gene-CCO35_RS07955;Dbxref=GenBank:WP_023136358.1;Name=WP_023136358.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=CCO35_RS07955;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_023136358.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 143934 144227 . + . ID=gene-CCO35_RS07960;Name=CCO35_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07960;old_locus_tag=CCO35_07955 NZ_NPME01000002.1 Protein Homology CDS 143934 144227 . + 0 ID=cds-WP_000027827.1;Parent=gene-CCO35_RS07960;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=CCO35_RS07960;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 144271 145917 . + . ID=gene-CCO35_RS07965;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CCO35_RS07965;old_locus_tag=CCO35_07960 NZ_NPME01000002.1 Protein Homology CDS 144271 145917 . + 0 ID=cds-WP_000729126.1;Parent=gene-CCO35_RS07965;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=CCO35_RS07965;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 146161 146514 . + . ID=gene-CCO35_RS07970;Name=CCO35_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07970;old_locus_tag=CCO35_07965 NZ_NPME01000002.1 Protein Homology CDS 146161 146514 . + 0 ID=cds-WP_000558210.1;Parent=gene-CCO35_RS07970;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=CCO35_RS07970;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 146562 147419 . - . ID=gene-CCO35_RS07975;Name=CCO35_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07975;old_locus_tag=CCO35_07970 NZ_NPME01000002.1 Protein Homology CDS 146562 147419 . - 0 ID=cds-WP_001229227.1;Parent=gene-CCO35_RS07975;Dbxref=GenBank:WP_001229227.1;Name=WP_001229227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=CCO35_RS07975;product=YjeJ family protein;protein_id=WP_001229227.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 147701 148729 . - . ID=gene-CCO35_RS07980;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=CCO35_RS07980;old_locus_tag=CCO35_07975 NZ_NPME01000002.1 Protein Homology CDS 147701 148729 . - 0 ID=cds-WP_000940477.1;Parent=gene-CCO35_RS07980;Dbxref=GenBank:WP_000940477.1;Name=WP_000940477.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=CCO35_RS07980;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940477.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 148770 149336 . + . ID=gene-CCO35_RS07985;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CCO35_RS07985;old_locus_tag=CCO35_07980 NZ_NPME01000002.1 Protein Homology CDS 148770 149336 . + 0 ID=cds-WP_000257282.1;Parent=gene-CCO35_RS07985;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=CCO35_RS07985;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 149397 149531 . + . ID=gene-CCO35_RS07990;Name=CCO35_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS07990;old_locus_tag=CCO35_07985 NZ_NPME01000002.1 Protein Homology CDS 149397 149531 . + 0 ID=cds-WP_000977687.1;Parent=gene-CCO35_RS07990;Dbxref=GenBank:WP_000977687.1;Name=WP_000977687.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=CCO35_RS07990;product=entericidin A/B family lipoprotein;protein_id=WP_000977687.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 149639 149785 . + . ID=gene-CCO35_RS07995;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=CCO35_RS07995;old_locus_tag=CCO35_07990 NZ_NPME01000002.1 Protein Homology CDS 149639 149785 . + 0 ID=cds-WP_000239598.1;Parent=gene-CCO35_RS07995;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=CCO35_RS07995;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 149816 150403 . - . ID=gene-CCO35_RS08000;Name=CCO35_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08000;old_locus_tag=CCO35_07995 NZ_NPME01000002.1 Protein Homology CDS 149816 150403 . - 0 ID=cds-WP_000912959.1;Parent=gene-CCO35_RS08000;Dbxref=GenBank:WP_000912959.1;Name=WP_000912959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=CCO35_RS08000;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912959.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 150660 150977 . + . ID=gene-CCO35_RS08005;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=CCO35_RS08005;old_locus_tag=CCO35_08000 NZ_NPME01000002.1 Protein Homology CDS 150660 150977 . + 0 ID=cds-WP_000118469.1;Parent=gene-CCO35_RS08005;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=CCO35_RS08005;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 150994 151527 . - . ID=gene-CCO35_RS08010;Name=CCO35_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08010;old_locus_tag=CCO35_08005 NZ_NPME01000002.1 Protein Homology CDS 150994 151527 . - 0 ID=cds-WP_001221670.1;Parent=gene-CCO35_RS08010;Dbxref=GenBank:WP_001221670.1;Name=WP_001221670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=CCO35_RS08010;product=lipocalin family protein;protein_id=WP_001221670.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 151638 151997 . - . ID=gene-CCO35_RS08015;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=CCO35_RS08015;old_locus_tag=CCO35_08010 NZ_NPME01000002.1 Protein Homology CDS 151638 151997 . - 0 ID=cds-WP_000609650.1;Parent=gene-CCO35_RS08015;Dbxref=GenBank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=CCO35_RS08015;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 152008 152403 . - . ID=gene-CCO35_RS08020;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=CCO35_RS08020;old_locus_tag=CCO35_08015 NZ_NPME01000002.1 Protein Homology CDS 152008 152403 . - 0 ID=cds-WP_000208749.1;Parent=gene-CCO35_RS08020;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=CCO35_RS08020;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 152414 153148 . - . ID=gene-CCO35_RS08025;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=CCO35_RS08025;old_locus_tag=CCO35_08020 NZ_NPME01000002.1 Protein Homology CDS 152414 153148 . - 0 ID=cds-WP_000829509.1;Parent=gene-CCO35_RS08025;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=CCO35_RS08025;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 153141 154931 . - . ID=gene-CCO35_RS08030;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=CCO35_RS08030;old_locus_tag=CCO35_08025 NZ_NPME01000002.1 Protein Homology CDS 153141 154931 . - 0 ID=cds-WP_001192952.1;Parent=gene-CCO35_RS08030;Dbxref=GenBank:WP_001192952.1;Name=WP_001192952.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=CCO35_RS08030;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192952.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 155254 156231 . + . ID=gene-CCO35_RS08035;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=CCO35_RS08035;old_locus_tag=CCO35_08030 NZ_NPME01000002.1 Protein Homology CDS 155254 156231 . + 0 ID=cds-WP_000004797.1;Parent=gene-CCO35_RS08035;Dbxref=GenBank:WP_000004797.1;Name=WP_000004797.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=CCO35_RS08035;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004797.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 156457 157959 . + . ID=gene-CCO35_RS08040;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=CCO35_RS08040;old_locus_tag=CCO35_08035 NZ_NPME01000002.1 Protein Homology CDS 156457 157959 . + 0 ID=cds-WP_000149874.1;Parent=gene-CCO35_RS08040;Dbxref=GenBank:WP_000149874.1;Name=WP_000149874.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=CCO35_RS08040;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000149874.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 158021 161347 . - . ID=gene-CCO35_RS08045;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=CCO35_RS08045;old_locus_tag=CCO35_08040 NZ_NPME01000002.1 Protein Homology CDS 158021 161347 . - 0 ID=cds-WP_001236755.1;Parent=gene-CCO35_RS08045;Dbxref=GenBank:WP_001236755.1;Name=WP_001236755.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=CCO35_RS08045;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236755.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 161366 162334 . - . ID=gene-CCO35_RS08050;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO35_RS08050;old_locus_tag=CCO35_08045 NZ_NPME01000002.1 Protein Homology CDS 161366 162334 . - 0 ID=cds-WP_000934949.1;Parent=gene-CCO35_RS08050;Dbxref=GenBank:WP_000934949.1;Name=WP_000934949.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=CCO35_RS08050;product=archaetidylserine decarboxylase;protein_id=WP_000934949.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 162426 163478 . - . ID=gene-CCO35_RS08055;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CCO35_RS08055;old_locus_tag=CCO35_08050 NZ_NPME01000002.1 Protein Homology CDS 162426 163478 . - 0 ID=cds-WP_000041945.1;Parent=gene-CCO35_RS08055;Dbxref=GenBank:WP_000041945.1;Name=WP_000041945.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=CCO35_RS08055;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041945.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 163585 164130 . + . ID=gene-CCO35_RS08060;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=CCO35_RS08060;old_locus_tag=CCO35_08055 NZ_NPME01000002.1 Protein Homology CDS 163585 164130 . + 0 ID=cds-WP_001271546.1;Parent=gene-CCO35_RS08060;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=CCO35_RS08060;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 164192 164932 . - . ID=gene-CCO35_RS08065;Name=CCO35_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08065;old_locus_tag=CCO35_08060 NZ_NPME01000002.1 Protein Homology CDS 164192 164932 . - 0 ID=cds-WP_000727894.1;Parent=gene-CCO35_RS08065;Dbxref=GenBank:WP_000727894.1;Name=WP_000727894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=CCO35_RS08065;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727894.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 165208 165283 . + . ID=gene-CCO35_RS08070;Name=CCO35_RS08070;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS08070;old_locus_tag=CCO35_08065 NZ_NPME01000002.1 tRNAscan-SE tRNA 165208 165283 . + . ID=rna-CCO35_RS08070;Parent=gene-CCO35_RS08070;anticodon=(pos:165241..165243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS08070;product=tRNA-Gly NZ_NPME01000002.1 tRNAscan-SE exon 165208 165283 . + . ID=exon-CCO35_RS08070-1;Parent=rna-CCO35_RS08070;anticodon=(pos:165241..165243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS08070;product=tRNA-Gly NZ_NPME01000002.1 RefSeq gene 165321 165396 . + . ID=gene-CCO35_RS08075;Name=CCO35_RS08075;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS08075;old_locus_tag=CCO35_08070 NZ_NPME01000002.1 tRNAscan-SE tRNA 165321 165396 . + . ID=rna-CCO35_RS08075;Parent=gene-CCO35_RS08075;anticodon=(pos:165354..165356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS08075;product=tRNA-Gly NZ_NPME01000002.1 tRNAscan-SE exon 165321 165396 . + . ID=exon-CCO35_RS08075-1;Parent=rna-CCO35_RS08075;anticodon=(pos:165354..165356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS08075;product=tRNA-Gly NZ_NPME01000002.1 RefSeq gene 165552 165627 . + . ID=gene-CCO35_RS08080;Name=CCO35_RS08080;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS08080;old_locus_tag=CCO35_08075 NZ_NPME01000002.1 tRNAscan-SE tRNA 165552 165627 . + . ID=rna-CCO35_RS08080;Parent=gene-CCO35_RS08080;anticodon=(pos:165585..165587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS08080;product=tRNA-Gly NZ_NPME01000002.1 tRNAscan-SE exon 165552 165627 . + . ID=exon-CCO35_RS08080-1;Parent=rna-CCO35_RS08080;anticodon=(pos:165585..165587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS08080;product=tRNA-Gly NZ_NPME01000002.1 RefSeq gene 165897 167036 . - . ID=gene-CCO35_RS08085;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CCO35_RS08085;old_locus_tag=CCO35_08080 NZ_NPME01000002.1 Protein Homology CDS 165897 167036 . - 0 ID=cds-WP_001615111.1;Parent=gene-CCO35_RS08085;Dbxref=GenBank:WP_001615111.1;Name=WP_001615111.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=CCO35_RS08085;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001615111.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 167035 168582 . + . ID=gene-CCO35_RS08090;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=CCO35_RS08090;old_locus_tag=CCO35_08085 NZ_NPME01000002.1 Protein Homology CDS 167035 168582 . + 0 ID=cds-WP_000968675.1;Parent=gene-CCO35_RS08090;Dbxref=GenBank:WP_000968675.1;Name=WP_000968675.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=CCO35_RS08090;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968675.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 168554 169015 . + . ID=gene-CCO35_RS08095;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CCO35_RS08095;old_locus_tag=CCO35_08090 NZ_NPME01000002.1 Protein Homology CDS 168554 169015 . + 0 ID=cds-WP_000981984.1;Parent=gene-CCO35_RS08095;Dbxref=GenBank:WP_000981984.1;Name=WP_000981984.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=CCO35_RS08095;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 169032 170351 . + . ID=gene-CCO35_RS08100;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=CCO35_RS08100;old_locus_tag=CCO35_08095 NZ_NPME01000002.1 Protein Homology CDS 169032 170351 . + 0 ID=cds-WP_000640362.1;Parent=gene-CCO35_RS08100;Dbxref=GenBank:WP_000640362.1;Name=WP_000640362.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=CCO35_RS08100;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640362.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 170361 172217 . + . ID=gene-CCO35_RS08105;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CCO35_RS08105;old_locus_tag=CCO35_08100 NZ_NPME01000002.1 Protein Homology CDS 170361 172217 . + 0 ID=cds-WP_031568666.1;Parent=gene-CCO35_RS08105;Dbxref=GenBank:WP_031568666.1;Name=WP_031568666.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=CCO35_RS08105;product=DNA mismatch repair endonuclease MutL;protein_id=WP_031568666.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 172210 173160 . + . ID=gene-CCO35_RS08110;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CCO35_RS08110;old_locus_tag=CCO35_08105 NZ_NPME01000002.1 Protein Homology CDS 172210 173160 . + 0 ID=cds-WP_031568669.1;Parent=gene-CCO35_RS08110;Dbxref=GenBank:WP_031568669.1;Name=WP_031568669.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=CCO35_RS08110;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_031568669.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 173243 173551 . + . ID=gene-CCO35_RS08115;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CCO35_RS08115;old_locus_tag=CCO35_08110 NZ_NPME01000002.1 Protein Homology CDS 173243 173551 . + 0 ID=cds-WP_001051875.1;Parent=gene-CCO35_RS08115;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=CCO35_RS08115;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 173623 174903 . + . ID=gene-CCO35_RS08120;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CCO35_RS08120;old_locus_tag=CCO35_08115 NZ_NPME01000002.1 Protein Homology CDS 173623 174903 . + 0 ID=cds-WP_000460338.1;Parent=gene-CCO35_RS08120;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=CCO35_RS08120;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 175118 176377 . + . ID=gene-CCO35_RS08125;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=CCO35_RS08125;old_locus_tag=CCO35_08120 NZ_NPME01000002.1 Protein Homology CDS 175118 176377 . + 0 ID=cds-WP_000312505.1;Parent=gene-CCO35_RS08125;Dbxref=GenBank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=CCO35_RS08125;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 176380 177384 . + . ID=gene-CCO35_RS08130;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=CCO35_RS08130;old_locus_tag=CCO35_08125 NZ_NPME01000002.1 Protein Homology CDS 176380 177384 . + 0 ID=cds-WP_001232417.1;Parent=gene-CCO35_RS08130;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=CCO35_RS08130;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 177463 177660 . + . ID=gene-CCO35_RS08135;Name=CCO35_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08135;old_locus_tag=CCO35_08130 NZ_NPME01000002.1 Protein Homology CDS 177463 177660 . + 0 ID=cds-WP_001089290.1;Parent=gene-CCO35_RS08135;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=CCO35_RS08135;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 177763 179061 . + . ID=gene-CCO35_RS08140;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=CCO35_RS08140;old_locus_tag=CCO35_08135 NZ_NPME01000002.1 Protein Homology CDS 177763 179061 . + 0 ID=cds-WP_000527965.1;Parent=gene-CCO35_RS08140;Dbxref=GenBank:WP_000527965.1;Name=WP_000527965.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=CCO35_RS08140;product=adenylosuccinate synthase;protein_id=WP_000527965.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 179281 179706 . + . ID=gene-CCO35_RS08150;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=CCO35_RS08150;old_locus_tag=CCO35_08145 NZ_NPME01000002.1 Protein Homology CDS 179281 179706 . + 0 ID=cds-WP_001177632.1;Parent=gene-CCO35_RS08150;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=CCO35_RS08150;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 179744 182182 . + . ID=gene-CCO35_RS08155;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CCO35_RS08155;old_locus_tag=CCO35_08150 NZ_NPME01000002.1 Protein Homology CDS 179744 182182 . + 0 ID=cds-WP_000076351.1;Parent=gene-CCO35_RS08155;Dbxref=GenBank:WP_000076351.1;Name=WP_000076351.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=CCO35_RS08155;product=ribonuclease R;protein_id=WP_000076351.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 182273 183004 . + . ID=gene-CCO35_RS08160;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CCO35_RS08160;old_locus_tag=CCO35_08155 NZ_NPME01000002.1 Protein Homology CDS 182273 183004 . + 0 ID=cds-WP_001293274.1;Parent=gene-CCO35_RS08160;Dbxref=GenBank:WP_001293274.1;Name=WP_001293274.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=CCO35_RS08160;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293274.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 183137 183541 . + . ID=gene-CCO35_RS08165;Name=CCO35_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08165;old_locus_tag=CCO35_08160 NZ_NPME01000002.1 Protein Homology CDS 183137 183541 . + 0 ID=cds-WP_000312615.1;Parent=gene-CCO35_RS08165;Dbxref=GenBank:WP_000312615.1;Name=WP_000312615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=CCO35_RS08165;product=YjfI family protein;protein_id=WP_000312615.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 183556 184254 . + . ID=gene-CCO35_RS08170;Name=CCO35_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08170;old_locus_tag=CCO35_08165 NZ_NPME01000002.1 Protein Homology CDS 183556 184254 . + 0 ID=cds-WP_000511981.1;Parent=gene-CCO35_RS08170;Dbxref=GenBank:WP_000511981.1;Name=WP_000511981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=CCO35_RS08170;product=PspA/IM30 family protein;protein_id=WP_000511981.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 184254 184355 . + . ID=gene-CCO35_RS24315;Name=CCO35_RS24315;end_range=184355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24315;partial=true;pseudo=true NZ_NPME01000002.1 Protein Homology CDS 184254 184355 . + 0 ID=cds-CCO35_RS24315;Parent=gene-CCO35_RS24315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=184355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=CCO35_RS24315;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000002.1 RefSeq gene 184478 185161 . + . ID=gene-CCO35_RS08175;Name=CCO35_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08175;old_locus_tag=CCO35_08170 NZ_NPME01000002.1 Protein Homology CDS 184478 185161 . + 0 ID=cds-WP_000090292.1;Parent=gene-CCO35_RS08175;Dbxref=GenBank:WP_000090292.1;Name=WP_000090292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=CCO35_RS08175;product=YjfK family protein;protein_id=WP_000090292.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 185179 185577 . + . ID=gene-CCO35_RS08180;Name=CCO35_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08180;old_locus_tag=CCO35_08175 NZ_NPME01000002.1 Protein Homology CDS 185179 185577 . + 0 ID=cds-WP_000547736.1;Parent=gene-CCO35_RS08180;Dbxref=GenBank:WP_000547736.1;Name=WP_000547736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=CCO35_RS08180;product=DUF350 domain-containing protein;protein_id=WP_000547736.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 185587 186225 . + . ID=gene-CCO35_RS08185;Name=CCO35_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08185;old_locus_tag=CCO35_08180 NZ_NPME01000002.1 Protein Homology CDS 185587 186225 . + 0 ID=cds-WP_001085604.1;Parent=gene-CCO35_RS08185;Dbxref=GenBank:WP_001085604.1;Name=WP_001085604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=CCO35_RS08185;product=DUF1190 domain-containing protein;protein_id=WP_001085604.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 186228 187391 . + . ID=gene-CCO35_RS08190;Name=CCO35_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08190;old_locus_tag=CCO35_08185 NZ_NPME01000002.1 Protein Homology CDS 186228 187391 . + 0 ID=cds-WP_094965331.1;Parent=gene-CCO35_RS08190;Dbxref=GenBank:WP_094965331.1;Name=WP_094965331.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=CCO35_RS08190;product=glutathionylspermidine synthase family protein;protein_id=WP_094965331.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 187476 189098 . + . ID=gene-CCO35_RS08195;Name=CCO35_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08195;old_locus_tag=CCO35_08190 NZ_NPME01000002.1 Protein Homology CDS 187476 189098 . + 0 ID=cds-WP_000118974.1;Parent=gene-CCO35_RS08195;Dbxref=GenBank:WP_000118974.1;Name=WP_000118974.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=CCO35_RS08195;product=isovaleryl-CoA dehydrogenase;protein_id=WP_000118974.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 189143 189418 . - . ID=gene-CCO35_RS08200;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=CCO35_RS08200;old_locus_tag=CCO35_08195 NZ_NPME01000002.1 Protein Homology CDS 189143 189418 . - 0 ID=cds-WP_001542902.1;Parent=gene-CCO35_RS08200;Dbxref=GenBank:WP_001542902.1;Name=WP_001542902.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=CCO35_RS08200;product=DUF1471 family protease activator YjfN;protein_id=WP_001542902.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 189549 189878 . - . ID=gene-CCO35_RS08205;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=CCO35_RS08205;old_locus_tag=CCO35_08200 NZ_NPME01000002.1 Protein Homology CDS 189549 189878 . - 0 ID=cds-WP_000586836.1;Parent=gene-CCO35_RS08205;Dbxref=GenBank:WP_000586836.1;Name=WP_000586836.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=CCO35_RS08205;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586836.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 190062 190811 . + . ID=gene-CCO35_RS08210;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=CCO35_RS08210;old_locus_tag=CCO35_08205 NZ_NPME01000002.1 Protein Homology CDS 190062 190811 . + 0 ID=cds-WP_000560310.1;Parent=gene-CCO35_RS08210;Dbxref=GenBank:WP_000560310.1;Name=WP_000560310.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=CCO35_RS08210;product=esterase;protein_id=WP_000560310.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 190808 191563 . - . ID=gene-CCO35_RS08215;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=CCO35_RS08215;old_locus_tag=CCO35_08210 NZ_NPME01000002.1 Protein Homology CDS 190808 191563 . - 0 ID=cds-WP_000133620.1;Parent=gene-CCO35_RS08215;Dbxref=GenBank:WP_000133620.1;Name=WP_000133620.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=CCO35_RS08215;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133620.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 191668 192732 . - . ID=gene-CCO35_RS08220;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CCO35_RS08220;old_locus_tag=CCO35_08215 NZ_NPME01000002.1 Protein Homology CDS 191668 192732 . - 0 ID=cds-WP_000049161.1;Parent=gene-CCO35_RS08220;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=CCO35_RS08220;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 193095 194492 . + . ID=gene-CCO35_RS08225;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=CCO35_RS08225;old_locus_tag=CCO35_08220 NZ_NPME01000002.1 Protein Homology CDS 193095 194492 . + 0 ID=cds-WP_000404876.1;Parent=gene-CCO35_RS08225;Dbxref=GenBank:WP_000404876.1;Name=WP_000404876.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=CCO35_RS08225;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404876.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 194508 194813 . + . ID=gene-CCO35_RS08230;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=CCO35_RS08230;old_locus_tag=CCO35_08225 NZ_NPME01000002.1 Protein Homology CDS 194508 194813 . + 0 ID=cds-WP_000218358.1;Parent=gene-CCO35_RS08230;Dbxref=GenBank:WP_000218358.1;Name=WP_000218358.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=CCO35_RS08230;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218358.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 194823 195287 . + . ID=gene-CCO35_RS08235;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=CCO35_RS08235;old_locus_tag=CCO35_08230 NZ_NPME01000002.1 Protein Homology CDS 194823 195287 . + 0 ID=cds-WP_000776531.1;Parent=gene-CCO35_RS08235;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=CCO35_RS08235;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 195301 195951 . + . ID=gene-CCO35_RS08240;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO35_RS08240;old_locus_tag=CCO35_08235 NZ_NPME01000002.1 Protein Homology CDS 195301 195951 . + 0 ID=cds-WP_000056761.1;Parent=gene-CCO35_RS08240;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=CCO35_RS08240;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 195961 196815 . + . ID=gene-CCO35_RS08245;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=CCO35_RS08245;old_locus_tag=CCO35_08240 NZ_NPME01000002.1 Protein Homology CDS 195961 196815 . + 0 ID=cds-WP_031568704.1;Parent=gene-CCO35_RS08245;Dbxref=GenBank:WP_031568704.1;Name=WP_031568704.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=CCO35_RS08245;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_031568704.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 196815 197501 . + . ID=gene-CCO35_RS08250;Name=ulaF;gbkey=Gene;gene=ulaF;gene_biotype=protein_coding;locus_tag=CCO35_RS08250;old_locus_tag=CCO35_08245 NZ_NPME01000002.1 Protein Homology CDS 196815 197501 . + 0 ID=cds-WP_001170764.1;Parent=gene-CCO35_RS08250;Dbxref=GenBank:WP_001170764.1;Name=WP_001170764.1;gbkey=CDS;gene=ulaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710063.2;locus_tag=CCO35_RS08250;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_001170764.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 197589 198146 . + . ID=gene-CCO35_RS08255;Name=CCO35_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08255;old_locus_tag=CCO35_08250 NZ_NPME01000002.1 Protein Homology CDS 197589 198146 . + 0 ID=cds-WP_000026293.1;Parent=gene-CCO35_RS08255;Dbxref=GenBank:WP_000026293.1;Name=WP_000026293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=CCO35_RS08255;product=YagU family protein;protein_id=WP_000026293.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 198199 198474 . - . ID=gene-CCO35_RS08260;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=CCO35_RS08260;old_locus_tag=CCO35_08255 NZ_NPME01000002.1 Protein Homology CDS 198199 198474 . - 0 ID=cds-WP_000466077.1;Parent=gene-CCO35_RS08260;Dbxref=GenBank:WP_000466077.1;Name=WP_000466077.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=CCO35_RS08260;product=DUF1471 family protein YjfY;protein_id=WP_000466077.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 198861 199256 . + . ID=gene-CCO35_RS08270;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CCO35_RS08270;old_locus_tag=CCO35_08265 NZ_NPME01000002.1 Protein Homology CDS 198861 199256 . + 0 ID=cds-WP_001216673.1;Parent=gene-CCO35_RS08270;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=CCO35_RS08270;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 199263 199577 . + . ID=gene-CCO35_RS08275;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=CCO35_RS08275;old_locus_tag=CCO35_08270 NZ_NPME01000002.1 Protein Homology CDS 199263 199577 . + 0 ID=cds-WP_001519453.1;Parent=gene-CCO35_RS08275;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=CCO35_RS08275;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 199582 199809 . + . ID=gene-CCO35_RS08280;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CCO35_RS08280;old_locus_tag=CCO35_08275 NZ_NPME01000002.1 Protein Homology CDS 199582 199809 . + 0 ID=cds-WP_000135199.1;Parent=gene-CCO35_RS08280;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=CCO35_RS08280;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 199851 200300 . + . ID=gene-CCO35_RS08285;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CCO35_RS08285;old_locus_tag=CCO35_08280 NZ_NPME01000002.1 Protein Homology CDS 199851 200300 . + 0 ID=cds-WP_001196065.1;Parent=gene-CCO35_RS08285;Dbxref=GenBank:WP_001196065.1;Name=WP_001196065.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=CCO35_RS08285;product=50S ribosomal protein L9;protein_id=WP_001196065.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 200447 201373 . + . ID=gene-CCO35_RS08290;Name=CCO35_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08290;old_locus_tag=CCO35_08285 NZ_NPME01000002.1 Protein Homology CDS 200447 201373 . + 0 ID=cds-WP_000381075.1;Parent=gene-CCO35_RS08290;Dbxref=GenBank:WP_000381075.1;Name=WP_000381075.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=CCO35_RS08290;product=DMT family transporter;protein_id=WP_000381075.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 201423 202058 . - . ID=gene-CCO35_RS08295;Name=CCO35_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08295;old_locus_tag=CCO35_08290 NZ_NPME01000002.1 Protein Homology CDS 201423 202058 . - 0 ID=cds-WP_001119446.1;Parent=gene-CCO35_RS08295;Dbxref=GenBank:WP_001119446.1;Name=WP_001119446.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=CCO35_RS08295;product=OapA family protein;protein_id=WP_001119446.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 202278 202898 . + . ID=gene-CCO35_RS08300;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=CCO35_RS08300;old_locus_tag=CCO35_08295 NZ_NPME01000002.1 Protein Homology CDS 202278 202898 . + 0 ID=cds-WP_000235161.1;Parent=gene-CCO35_RS08300;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=CCO35_RS08300;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 203194 204603 . + . ID=gene-CCO35_RS08305;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=CCO35_RS08305;old_locus_tag=CCO35_08300 NZ_NPME01000002.1 Protein Homology CDS 203194 204603 . + 0 ID=cds-WP_000228322.1;Parent=gene-CCO35_RS08305;Dbxref=GenBank:WP_000228322.1;Name=WP_000228322.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=CCO35_RS08305;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228322.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 204715 205377 . - . ID=gene-CCO35_RS08310;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=CCO35_RS08310;old_locus_tag=CCO35_08305 NZ_NPME01000002.1 Protein Homology CDS 204715 205377 . - 0 ID=cds-WP_000331471.1;Parent=gene-CCO35_RS08310;Dbxref=GenBank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=CCO35_RS08310;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 205480 206445 . - . ID=gene-CCO35_RS08315;Name=CCO35_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08315;old_locus_tag=CCO35_08310 NZ_NPME01000002.1 Protein Homology CDS 205480 206445 . - 0 ID=cds-WP_000623290.1;Parent=gene-CCO35_RS08315;Dbxref=GenBank:WP_000623290.1;Name=WP_000623290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=CCO35_RS08315;product=DMT family transporter;protein_id=WP_000623290.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 206526 207374 . - . ID=gene-CCO35_RS08320;Name=CCO35_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08320;old_locus_tag=CCO35_08315 NZ_NPME01000002.1 Protein Homology CDS 206526 207374 . - 0 ID=cds-WP_000560616.1;Parent=gene-CCO35_RS08320;Dbxref=GenBank:WP_000560616.1;Name=WP_000560616.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=CCO35_RS08320;product=SDR family oxidoreductase;protein_id=WP_000560616.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 207462 207848 . + . ID=gene-CCO35_RS08325;Name=CCO35_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08325;old_locus_tag=CCO35_08320 NZ_NPME01000002.1 Protein Homology CDS 207462 207848 . + 0 ID=cds-WP_001201295.1;Parent=gene-CCO35_RS08325;Dbxref=GenBank:WP_001201295.1;Name=WP_001201295.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=CCO35_RS08325;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201295.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 207906 209849 . - . ID=gene-CCO35_RS08330;Name=CCO35_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08330;old_locus_tag=CCO35_08325 NZ_NPME01000002.1 Protein Homology CDS 207906 209849 . - 0 ID=cds-WP_031568721.1;Parent=gene-CCO35_RS08330;Dbxref=GenBank:WP_031568721.1;Name=WP_031568721.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=CCO35_RS08330;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_031568721.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 210117 210857 . + . ID=gene-CCO35_RS08340;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=CCO35_RS08340;old_locus_tag=CCO35_08335 NZ_NPME01000002.1 Protein Homology CDS 210117 210857 . + 0 ID=cds-WP_000893398.1;Parent=gene-CCO35_RS08340;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=CCO35_RS08340;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 210847 211404 . - . ID=gene-CCO35_RS08345;Name=CCO35_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08345;old_locus_tag=CCO35_08340 NZ_NPME01000002.1 Protein Homology CDS 210847 211404 . - 0 ID=cds-WP_000175303.1;Parent=gene-CCO35_RS08345;Dbxref=GenBank:WP_000175303.1;Name=WP_000175303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=CCO35_RS08345;product=YtfJ family protein;protein_id=WP_000175303.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 211731 211937 . + . ID=gene-CCO35_RS08355;Name=CCO35_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08355;old_locus_tag=CCO35_08350 NZ_NPME01000002.1 Protein Homology CDS 211731 211937 . + 0 ID=cds-WP_000689229.1;Parent=gene-CCO35_RS08355;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=CCO35_RS08355;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 212022 213365 . - . ID=gene-CCO35_RS08360;Name=CCO35_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08360;old_locus_tag=CCO35_08355 NZ_NPME01000002.1 Protein Homology CDS 212022 213365 . - 0 ID=cds-WP_000934970.1;Parent=gene-CCO35_RS08360;Dbxref=GenBank:WP_000934970.1;Name=WP_000934970.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=CCO35_RS08360;product=hemolysin family protein;protein_id=WP_000934970.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 213548 214186 . - . ID=gene-CCO35_RS08365;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CCO35_RS08365;old_locus_tag=CCO35_08360 NZ_NPME01000002.1 Protein Homology CDS 213548 214186 . - 0 ID=cds-WP_000051464.1;Parent=gene-CCO35_RS08365;Dbxref=GenBank:WP_000051464.1;Name=WP_000051464.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=CCO35_RS08365;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_000051464.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 214399 216132 . + . ID=gene-CCO35_RS08370;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=CCO35_RS08370;old_locus_tag=CCO35_08365 NZ_NPME01000002.1 Protein Homology CDS 214399 216132 . + 0 ID=cds-WP_001120237.1;Parent=gene-CCO35_RS08370;Dbxref=GenBank:WP_001120237.1;Name=WP_001120237.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=CCO35_RS08370;product=autotransporter assembly complex protein TamA;protein_id=WP_001120237.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 216129 219908 . + . ID=gene-CCO35_RS08375;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=CCO35_RS08375;old_locus_tag=CCO35_08370 NZ_NPME01000002.1 Protein Homology CDS 216129 219908 . + 0 ID=cds-WP_000060830.1;Parent=gene-CCO35_RS08375;Dbxref=GenBank:WP_000060830.1;Name=WP_000060830.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=CCO35_RS08375;product=autotransporter assembly complex protein TamB;protein_id=WP_000060830.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 219911 220255 . + . ID=gene-CCO35_RS08380;Name=CCO35_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08380;old_locus_tag=CCO35_08375 NZ_NPME01000002.1 Protein Homology CDS 219911 220255 . + 0 ID=cds-WP_001219167.1;Parent=gene-CCO35_RS08380;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=CCO35_RS08380;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 220311 221519 . - . ID=gene-CCO35_RS08385;Name=CCO35_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08385;old_locus_tag=CCO35_08380 NZ_NPME01000002.1 Protein Homology CDS 220311 221519 . - 0 ID=cds-WP_094965332.1;Parent=gene-CCO35_RS08385;Dbxref=GenBank:WP_094965332.1;Name=WP_094965332.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=CCO35_RS08385;product=MFS transporter;protein_id=WP_094965332.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 221516 222679 . - . ID=gene-CCO35_RS08390;Name=CCO35_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08390;old_locus_tag=CCO35_08385 NZ_NPME01000002.1 Protein Homology CDS 221516 222679 . - 0 ID=cds-WP_000977196.1;Parent=gene-CCO35_RS08390;Dbxref=GenBank:WP_000977196.1;Name=WP_000977196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=CCO35_RS08390;product=metallo-dependent hydrolase;protein_id=WP_000977196.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 223089 223619 . - . ID=gene-CCO35_RS08395;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=CCO35_RS08395;old_locus_tag=CCO35_08390 NZ_NPME01000002.1 Protein Homology CDS 223089 223619 . - 0 ID=cds-WP_000055079.1;Parent=gene-CCO35_RS08395;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=CCO35_RS08395;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 223846 224844 . - . ID=gene-CCO35_RS08400;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=CCO35_RS08400;old_locus_tag=CCO35_08395 NZ_NPME01000002.1 Protein Homology CDS 223846 224844 . - 0 ID=cds-WP_000853764.1;Parent=gene-CCO35_RS08400;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=CCO35_RS08400;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 225019 226398 . + . ID=gene-CCO35_RS08405;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=CCO35_RS08405;old_locus_tag=CCO35_08400 NZ_NPME01000002.1 Protein Homology CDS 225019 226398 . + 0 ID=cds-WP_001219833.1;Parent=gene-CCO35_RS08405;Dbxref=GenBank:WP_001219833.1;Name=WP_001219833.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463277.1;locus_tag=CCO35_RS08405;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219833.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 226889 227722 . + . ID=gene-CCO35_RS08415;Name=iolR;gbkey=Gene;gene=iolR;gene_biotype=protein_coding;locus_tag=CCO35_RS08415;old_locus_tag=CCO35_08410 NZ_NPME01000002.1 Protein Homology CDS 226889 227722 . + 0 ID=cds-WP_000033840.1;Parent=gene-CCO35_RS08415;Dbxref=GenBank:WP_000033840.1;Name=WP_000033840.1;gbkey=CDS;gene=iolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463278.1;locus_tag=CCO35_RS08415;product=myo-inositol utilization transcriptional regulator IolR;protein_id=WP_000033840.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 227773 229206 . - . ID=gene-CCO35_RS08420;Name=iolT1;gbkey=Gene;gene=iolT1;gene_biotype=protein_coding;locus_tag=CCO35_RS08420;old_locus_tag=CCO35_08415 NZ_NPME01000002.1 Protein Homology CDS 227773 229206 . - 0 ID=cds-WP_000107709.1;Parent=gene-CCO35_RS08420;Dbxref=GenBank:WP_000107709.1;Name=WP_000107709.1;gbkey=CDS;gene=iolT1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=CCO35_RS08420;product=myo-inositol import MFS transporter IolT1;protein_id=WP_000107709.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 229434 229628 . - . ID=gene-CCO35_RS08425;Name=CCO35_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08425;old_locus_tag=CCO35_08420 NZ_NPME01000002.1 GeneMarkS-2+ CDS 229434 229628 . - 0 ID=cds-WP_000667715.1;Parent=gene-CCO35_RS08425;Dbxref=GenBank:WP_000667715.1;Name=WP_000667715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS08425;product=hypothetical protein;protein_id=WP_000667715.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 229665 231101 . + . ID=gene-CCO35_RS08430;Name=iolT2;gbkey=Gene;gene=iolT2;gene_biotype=protein_coding;locus_tag=CCO35_RS08430;old_locus_tag=CCO35_08425 NZ_NPME01000002.1 Protein Homology CDS 229665 231101 . + 0 ID=cds-WP_000083113.1;Parent=gene-CCO35_RS08430;Dbxref=GenBank:WP_000083113.1;Name=WP_000083113.1;gbkey=CDS;gene=iolT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463280.1;locus_tag=CCO35_RS08430;product=myo-inositol import MFS transporter IolT2;protein_id=WP_000083113.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 231454 232263 . - . ID=gene-CCO35_RS08435;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=CCO35_RS08435;old_locus_tag=CCO35_08430 NZ_NPME01000002.1 Protein Homology CDS 231454 232263 . - 0 ID=cds-WP_000002011.1;Parent=gene-CCO35_RS08435;Dbxref=GenBank:WP_000002011.1;Name=WP_000002011.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463281.1;locus_tag=CCO35_RS08435;product=5-deoxy-glucuronate isomerase;protein_id=WP_000002011.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 232288 233793 . - . ID=gene-CCO35_RS08440;Name=iolA;gbkey=Gene;gene=iolA;gene_biotype=protein_coding;locus_tag=CCO35_RS08440;old_locus_tag=CCO35_08435 NZ_NPME01000002.1 Protein Homology CDS 232288 233793 . - 0 ID=cds-WP_000450728.1;Parent=gene-CCO35_RS08440;Dbxref=GenBank:WP_000450728.1;Name=WP_000450728.1;gbkey=CDS;gene=iolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=CCO35_RS08440;product=malonate-semialdehyde dehydrogenase IolA;protein_id=WP_000450728.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 233809 234111 . - . ID=gene-CCO35_RS08445;Name=CCO35_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08445;old_locus_tag=CCO35_08440 NZ_NPME01000002.1 Protein Homology CDS 233809 234111 . - 0 ID=cds-WP_094965333.1;Parent=gene-CCO35_RS08445;Dbxref=GenBank:WP_094965333.1;Name=WP_094965333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=CCO35_RS08445;product=hypothetical protein;protein_id=WP_094965333.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 234234 235058 . + . ID=gene-CCO35_RS08450;Name=reiD;gbkey=Gene;gene=reiD;gene_biotype=protein_coding;locus_tag=CCO35_RS08450;old_locus_tag=CCO35_08445 NZ_NPME01000002.1 Protein Homology CDS 234234 235058 . + 0 ID=cds-WP_000332219.1;Parent=gene-CCO35_RS08450;Dbxref=GenBank:WP_000332219.1;Name=WP_000332219.1;gbkey=CDS;gene=reiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332219.1;locus_tag=CCO35_RS08450;product=myo-inositol utilization transcriptional regulator ReiD;protein_id=WP_000332219.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 235318 236238 . + . ID=gene-CCO35_RS08455;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=CCO35_RS08455;old_locus_tag=CCO35_08450 NZ_NPME01000002.1 Protein Homology CDS 235318 236238 . + 0 ID=cds-WP_012601329.1;Parent=gene-CCO35_RS08455;Dbxref=GenBank:WP_012601329.1;Name=WP_012601329.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463285.3;locus_tag=CCO35_RS08455;product=myo-inosose-2 dehydratase;protein_id=WP_012601329.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 236257 237267 . + . ID=gene-CCO35_RS08460;Name=iolG1;gbkey=Gene;gene=iolG1;gene_biotype=protein_coding;locus_tag=CCO35_RS08460;old_locus_tag=CCO35_08455 NZ_NPME01000002.1 Protein Homology CDS 236257 237267 . + 0 ID=cds-WP_000172704.1;Parent=gene-CCO35_RS08460;Dbxref=GenBank:WP_000172704.1;Name=WP_000172704.1;gbkey=CDS;gene=iolG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463286.1;locus_tag=CCO35_RS08460;product=inositol 2-dehydrogenase IolG1;protein_id=WP_000172704.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 237365 238708 . + . ID=gene-CCO35_RS08465;Name=srfJ;gbkey=Gene;gene=srfJ;gene_biotype=protein_coding;locus_tag=CCO35_RS08465;old_locus_tag=CCO35_08460 NZ_NPME01000002.1 Protein Homology CDS 237365 238708 . + 0 ID=cds-WP_000678384.1;Parent=gene-CCO35_RS08465;Dbxref=GenBank:WP_000678384.1;Name=WP_000678384.1;gbkey=CDS;gene=srfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463287.1;locus_tag=CCO35_RS08465;product=lysosomal glucosyl ceramidase-like type III secretion effector SrfJ;protein_id=WP_000678384.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 238709 239542 . + . ID=gene-CCO35_RS08470;Name=iolI1;gbkey=Gene;gene=iolI1;gene_biotype=protein_coding;locus_tag=CCO35_RS08470;old_locus_tag=CCO35_08465 NZ_NPME01000002.1 Protein Homology CDS 238709 239542 . + 0 ID=cds-WP_000976927.1;Parent=gene-CCO35_RS08470;Dbxref=GenBank:WP_000976927.1;Name=WP_000976927.1;gbkey=CDS;gene=iolI1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463288.1;locus_tag=CCO35_RS08470;product=2-keto-myo-inositol isomerase IolI1;protein_id=WP_000976927.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 239539 240705 . - . ID=gene-CCO35_RS08475;Name=CCO35_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08475;old_locus_tag=CCO35_08470 NZ_NPME01000002.1 Protein Homology CDS 239539 240705 . - 0 ID=cds-WP_001111174.1;Parent=gene-CCO35_RS08475;Dbxref=GenBank:WP_001111174.1;Name=WP_001111174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=CCO35_RS08475;product=MFS transporter;protein_id=WP_001111174.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 240766 242703 . - . ID=gene-CCO35_RS08480;Name=CCO35_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08480;old_locus_tag=CCO35_08475 NZ_NPME01000002.1 Protein Homology CDS 240766 242703 . - 0 ID=cds-WP_077905318.1;Parent=gene-CCO35_RS08480;Dbxref=GenBank:WP_077905318.1;Name=WP_077905318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453701.1;locus_tag=CCO35_RS08480;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_077905318.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 243120 245060 . + . ID=gene-CCO35_RS08485;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=CCO35_RS08485;old_locus_tag=CCO35_08480 NZ_NPME01000002.1 Protein Homology CDS 243120 245060 . + 0 ID=cds-WP_000849477.1;Parent=gene-CCO35_RS08485;Dbxref=GenBank:WP_000849477.1;Name=WP_000849477.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453702.1;locus_tag=CCO35_RS08485;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_000849477.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 245241 246263 . + . ID=gene-CCO35_RS08490;Name=iolG2;gbkey=Gene;gene=iolG2;gene_biotype=protein_coding;locus_tag=CCO35_RS08490;old_locus_tag=CCO35_08485 NZ_NPME01000002.1 Protein Homology CDS 245241 246263 . + 0 ID=cds-WP_000736098.1;Parent=gene-CCO35_RS08490;Dbxref=GenBank:WP_000736098.1;Name=WP_000736098.1;gbkey=CDS;gene=iolG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=CCO35_RS08490;product=D-chiro-inositol-2-dehydrogenase IolG2;protein_id=WP_000736098.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 246336 247562 . + . ID=gene-CCO35_RS08495;Name=CCO35_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08495;old_locus_tag=CCO35_08490 NZ_NPME01000002.1 Protein Homology CDS 246336 247562 . + 0 ID=cds-WP_000661780.1;Parent=gene-CCO35_RS08495;Dbxref=GenBank:WP_000661780.1;Name=WP_000661780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463295.1;locus_tag=CCO35_RS08495;product=MFS transporter;protein_id=WP_000661780.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 247723 248538 . + . ID=gene-CCO35_RS08500;Name=iolI2;gbkey=Gene;gene=iolI2;gene_biotype=protein_coding;locus_tag=CCO35_RS08500;old_locus_tag=CCO35_08495 NZ_NPME01000002.1 Protein Homology CDS 247723 248538 . + 0 ID=cds-WP_001019388.1;Parent=gene-CCO35_RS08500;Dbxref=GenBank:WP_001019388.1;Name=WP_001019388.1;gbkey=CDS;gene=iolI2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463296.1;locus_tag=CCO35_RS08500;product=2-keto-myo-inositol isomerase IolI2;protein_id=WP_001019388.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 248591 249475 . + . ID=gene-CCO35_RS08505;Name=iolH;gbkey=Gene;gene=iolH;gene_biotype=protein_coding;locus_tag=CCO35_RS08505;old_locus_tag=CCO35_08500 NZ_NPME01000002.1 Protein Homology CDS 248591 249475 . + 0 ID=cds-WP_000683955.1;Parent=gene-CCO35_RS08505;Dbxref=GenBank:WP_000683955.1;Name=WP_000683955.1;gbkey=CDS;gene=iolH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463297.1;locus_tag=CCO35_RS08505;product=sugar phosphate isomerase/epimerase IolH;protein_id=WP_000683955.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 249531 250082 . - . ID=gene-CCO35_RS08510;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=CCO35_RS08510;old_locus_tag=CCO35_08505 NZ_NPME01000002.1 Protein Homology CDS 249531 250082 . - 0 ID=cds-WP_000166287.1;Parent=gene-CCO35_RS08510;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=CCO35_RS08510;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 250178 251530 . + . ID=gene-CCO35_RS08515;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=CCO35_RS08515;old_locus_tag=CCO35_08510 NZ_NPME01000002.1 Protein Homology CDS 250178 251530 . + 0 ID=cds-WP_000852997.1;Parent=gene-CCO35_RS08515;Dbxref=GenBank:WP_000852997.1;Name=WP_000852997.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=CCO35_RS08515;product=metalloprotease PmbA;protein_id=WP_000852997.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 251629 252015 . + . ID=gene-CCO35_RS08520;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=CCO35_RS08520;old_locus_tag=CCO35_08515 NZ_NPME01000002.1 Protein Homology CDS 251629 252015 . + 0 ID=cds-WP_031568755.1;Parent=gene-CCO35_RS08520;Dbxref=GenBank:WP_031568755.1;Name=WP_031568755.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=CCO35_RS08520;product=cytochrome b562;protein_id=WP_031568755.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 252293 252631 . + . ID=gene-CCO35_RS08525;Name=CCO35_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08525;old_locus_tag=CCO35_08520 NZ_NPME01000002.1 Protein Homology CDS 252293 252631 . + 0 ID=cds-WP_001255104.1;Parent=gene-CCO35_RS08525;Dbxref=GenBank:WP_001255104.1;Name=WP_001255104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=CCO35_RS08525;product=glycine dehydrogenase;protein_id=WP_001255104.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 252642 253004 . + . ID=gene-CCO35_RS08530;Name=CCO35_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08530;old_locus_tag=CCO35_08525 NZ_NPME01000002.1 Protein Homology CDS 252642 253004 . + 0 ID=cds-WP_000435389.1;Parent=gene-CCO35_RS08530;Dbxref=GenBank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=CCO35_RS08530;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 253004 253306 . + . ID=gene-CCO35_RS08535;Name=CCO35_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08535;old_locus_tag=CCO35_08530 NZ_NPME01000002.1 Protein Homology CDS 253004 253306 . + 0 ID=cds-WP_000975187.1;Parent=gene-CCO35_RS08535;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=CCO35_RS08535;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 253329 254105 . + . ID=gene-CCO35_RS08540;Name=CCO35_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08540;old_locus_tag=CCO35_08535 NZ_NPME01000002.1 Protein Homology CDS 253329 254105 . + 0 ID=cds-WP_000478578.1;Parent=gene-CCO35_RS08540;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=CCO35_RS08540;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 254117 254761 . + . ID=gene-CCO35_RS08545;Name=CCO35_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08545;old_locus_tag=CCO35_08540 NZ_NPME01000002.1 Protein Homology CDS 254117 254761 . + 0 ID=cds-WP_000392127.1;Parent=gene-CCO35_RS08545;Dbxref=GenBank:WP_000392127.1;Name=WP_000392127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=CCO35_RS08545;product=DUF4310 family protein;protein_id=WP_000392127.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 254820 255953 . + . ID=gene-CCO35_RS08550;Name=CCO35_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08550;old_locus_tag=CCO35_08545 NZ_NPME01000002.1 Protein Homology CDS 254820 255953 . + 0 ID=cds-WP_000459945.1;Parent=gene-CCO35_RS08550;Dbxref=GenBank:WP_000459945.1;Name=WP_000459945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=CCO35_RS08550;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_000459945.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 255937 257055 . + . ID=gene-CCO35_RS08555;Name=CCO35_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08555;old_locus_tag=CCO35_08550 NZ_NPME01000002.1 Protein Homology CDS 255937 257055 . + 0 ID=cds-WP_001139184.1;Parent=gene-CCO35_RS08555;Dbxref=GenBank:WP_001139184.1;Name=WP_001139184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=CCO35_RS08555;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_001139184.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 257052 257792 . + . ID=gene-CCO35_RS08560;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO35_RS08560;old_locus_tag=CCO35_08555 NZ_NPME01000002.1 Protein Homology CDS 257052 257792 . + 0 ID=cds-WP_000779263.1;Parent=gene-CCO35_RS08560;Dbxref=GenBank:WP_000779263.1;Name=WP_000779263.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=CCO35_RS08560;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000779263.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 257809 259722 . + . ID=gene-CCO35_RS08565;Name=CCO35_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08565;old_locus_tag=CCO35_08560 NZ_NPME01000002.1 Protein Homology CDS 257809 259722 . + 0 ID=cds-WP_001212131.1;Parent=gene-CCO35_RS08565;Dbxref=GenBank:WP_001212131.1;Name=WP_001212131.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=CCO35_RS08565;product=BglG family transcription antiterminator;protein_id=WP_001212131.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 259800 260042 . + . ID=gene-CCO35_RS08570;Name=CCO35_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08570;old_locus_tag=CCO35_08565 NZ_NPME01000002.1 Protein Homology CDS 259800 260042 . + 0 ID=cds-WP_000212724.1;Parent=gene-CCO35_RS08570;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=CCO35_RS08570;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 260032 260316 . + . ID=gene-CCO35_RS08575;Name=CCO35_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08575;old_locus_tag=CCO35_08570 NZ_NPME01000002.1 Protein Homology CDS 260032 260316 . + 0 ID=cds-WP_000220578.1;Parent=gene-CCO35_RS08575;Dbxref=GenBank:WP_000220578.1;Name=WP_000220578.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=CCO35_RS08575;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220578.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 260320 260784 . - . ID=gene-CCO35_RS08580;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CCO35_RS08580;old_locus_tag=CCO35_08575 NZ_NPME01000002.1 Protein Homology CDS 260320 260784 . - 0 ID=cds-WP_001009178.1;Parent=gene-CCO35_RS08580;Dbxref=GenBank:WP_001009178.1;Name=WP_001009178.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=CCO35_RS08580;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001009178.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 261001 263139 . - . ID=gene-CCO35_RS08585;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CCO35_RS08585;old_locus_tag=CCO35_08580 NZ_NPME01000002.1 Protein Homology CDS 261001 263139 . - 0 ID=cds-WP_000187815.1;Parent=gene-CCO35_RS08585;Dbxref=GenBank:WP_000187815.1;Name=WP_000187815.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=CCO35_RS08585;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187815.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 263754 264494 . - . ID=gene-CCO35_RS08590;Name=CCO35_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08590;old_locus_tag=CCO35_08585 NZ_NPME01000002.1 Protein Homology CDS 263754 264494 . - 0 ID=cds-WP_223202802.1;Parent=gene-CCO35_RS08590;Dbxref=GenBank:WP_223202802.1;Name=WP_223202802.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029120.1;locus_tag=CCO35_RS08590;product=GIY-YIG nuclease family protein;protein_id=WP_223202802.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 264660 265631 . - . ID=gene-CCO35_RS08595;Name=CCO35_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08595;old_locus_tag=CCO35_08590 NZ_NPME01000002.1 Protein Homology CDS 264660 265631 . - 0 ID=cds-WP_000219492.1;Parent=gene-CCO35_RS08595;Dbxref=GenBank:WP_000219492.1;Name=WP_000219492.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219492.1;locus_tag=CCO35_RS08595;product=IS110 family transposase;protein_id=WP_000219492.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 265861 267513 . - . ID=gene-CCO35_RS08600;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CCO35_RS08600;old_locus_tag=CCO35_08595 NZ_NPME01000002.1 Protein Homology CDS 265861 267513 . - 0 ID=cds-WP_000155049.1;Parent=gene-CCO35_RS08600;Dbxref=GenBank:WP_000155049.1;Name=WP_000155049.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=CCO35_RS08600;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_000155049.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 267563 268981 . - . ID=gene-CCO35_RS08605;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=CCO35_RS08605;old_locus_tag=CCO35_08600 NZ_NPME01000002.1 Protein Homology CDS 267563 268981 . - 0 ID=cds-WP_000048828.1;Parent=gene-CCO35_RS08605;Dbxref=GenBank:WP_000048828.1;Name=WP_000048828.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=CCO35_RS08605;product=PTS trehalose transporter subunit IIBC;protein_id=WP_000048828.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 269119 270066 . - . ID=gene-CCO35_RS08615;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CCO35_RS08615;old_locus_tag=CCO35_08610 NZ_NPME01000002.1 Protein Homology CDS 269119 270066 . - 0 ID=cds-WP_001181297.1;Parent=gene-CCO35_RS08615;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=CCO35_RS08615;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 270263 270316 . + . ID=gene-CCO35_RS24320;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=CCO35_RS24320 NZ_NPME01000002.1 Protein Homology CDS 270263 270316 . + 0 ID=cds-WP_099374030.1;Parent=gene-CCO35_RS24320;Dbxref=GenBank:WP_099374030.1;Name=WP_099374030.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=CCO35_RS24320;product=mgtA regulatory leader peptide MgtL;protein_id=WP_099374030.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 270457 273165 . + . ID=gene-CCO35_RS08620;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO35_RS08620;old_locus_tag=CCO35_08615 NZ_NPME01000002.1 Protein Homology CDS 270457 273165 . + 0 ID=cds-WP_031615735.1;Parent=gene-CCO35_RS08620;Dbxref=GenBank:WP_031615735.1;Name=WP_031615735.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=CCO35_RS08620;product=magnesium-translocating P-type ATPase;protein_id=WP_031615735.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 273281 273727 . - . ID=gene-CCO35_RS08625;Name=CCO35_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08625;old_locus_tag=CCO35_08620 NZ_NPME01000002.1 Protein Homology CDS 273281 273727 . - 0 ID=cds-WP_000252557.1;Parent=gene-CCO35_RS08625;Dbxref=GenBank:WP_000252557.1;Name=WP_000252557.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=CCO35_RS08625;product=transposase;protein_id=WP_000252557.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 273802 274188 . - . ID=gene-CCO35_RS08630;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=CCO35_RS08630;old_locus_tag=CCO35_08625 NZ_NPME01000002.1 Protein Homology CDS 273802 274188 . - 0 ID=cds-WP_000047544.1;Parent=gene-CCO35_RS08630;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=CCO35_RS08630;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 274265 274726 . - . ID=gene-CCO35_RS08635;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=CCO35_RS08635;old_locus_tag=CCO35_08630 NZ_NPME01000002.1 Protein Homology CDS 274265 274726 . - 0 ID=cds-WP_000148567.1;Parent=gene-CCO35_RS08635;Dbxref=GenBank:WP_000148567.1;Name=WP_000148567.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=CCO35_RS08635;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148567.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 274739 275674 . - . ID=gene-CCO35_RS08640;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=CCO35_RS08640;old_locus_tag=CCO35_08635 NZ_NPME01000002.1 Protein Homology CDS 274739 275674 . - 0 ID=cds-WP_000013055.1;Parent=gene-CCO35_RS08640;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=CCO35_RS08640;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 275710 275811 . - . ID=gene-CCO35_RS08645;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=CCO35_RS08645;old_locus_tag=CCO35_08640 NZ_NPME01000002.1 Protein Homology CDS 275710 275811 . - 0 ID=cds-WP_000249504.1;Parent=gene-CCO35_RS08645;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=CCO35_RS08645;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 275791 275932 . + . ID=gene-CCO35_RS08650;Name=CCO35_RS08650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS08650;old_locus_tag=CCO35_08645;pseudo=true NZ_NPME01000002.1 Protein Homology CDS 275791 275932 . + 0 ID=cds-CCO35_RS08650;Parent=gene-CCO35_RS08650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=CCO35_RS08650;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000002.1 RefSeq gene 275902 276390 . - . ID=gene-CCO35_RS08655;Name=CCO35_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08655;old_locus_tag=CCO35_08650 NZ_NPME01000002.1 Protein Homology CDS 275902 276390 . - 0 ID=cds-WP_000666051.1;Parent=gene-CCO35_RS08655;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=CCO35_RS08655;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 276577 277980 . - . ID=gene-CCO35_RS08660;Name=CCO35_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08660;old_locus_tag=CCO35_08655 NZ_NPME01000002.1 Protein Homology CDS 276577 277980 . - 0 ID=cds-WP_000514438.1;Parent=gene-CCO35_RS08660;Dbxref=GenBank:WP_000514438.1;Name=WP_000514438.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=CCO35_RS08660;product=YfcC family protein;protein_id=WP_000514438.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 278036 279040 . - . ID=gene-CCO35_RS08665;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO35_RS08665;old_locus_tag=CCO35_08660 NZ_NPME01000002.1 Protein Homology CDS 278036 279040 . - 0 ID=cds-WP_000237031.1;Parent=gene-CCO35_RS08665;Dbxref=GenBank:WP_000237031.1;Name=WP_000237031.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=CCO35_RS08665;product=ornithine carbamoyltransferase;protein_id=WP_000237031.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 279152 280084 . - . ID=gene-CCO35_RS08670;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CCO35_RS08670;old_locus_tag=CCO35_08665 NZ_NPME01000002.1 Protein Homology CDS 279152 280084 . - 0 ID=cds-WP_000428751.1;Parent=gene-CCO35_RS08670;Dbxref=GenBank:WP_000428751.1;Name=WP_000428751.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=CCO35_RS08670;product=carbamate kinase;protein_id=WP_000428751.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 280095 281315 . - . ID=gene-CCO35_RS08675;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO35_RS08675;old_locus_tag=CCO35_08670 NZ_NPME01000002.1 Protein Homology CDS 280095 281315 . - 0 ID=cds-WP_000410844.1;Parent=gene-CCO35_RS08675;Dbxref=GenBank:WP_000410844.1;Name=WP_000410844.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=CCO35_RS08675;product=arginine deiminase;protein_id=WP_000410844.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 281991 282443 . + . ID=gene-CCO35_RS08690;Name=CCO35_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08690;old_locus_tag=CCO35_08685 NZ_NPME01000002.1 Protein Homology CDS 281991 282443 . + 0 ID=cds-WP_000583457.1;Parent=gene-CCO35_RS08690;Dbxref=GenBank:WP_000583457.1;Name=WP_000583457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=CCO35_RS08690;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000583457.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 282516 283520 . - . ID=gene-CCO35_RS08695;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO35_RS08695;old_locus_tag=CCO35_08690 NZ_NPME01000002.1 Protein Homology CDS 282516 283520 . - 0 ID=cds-WP_000103041.1;Parent=gene-CCO35_RS08695;Dbxref=GenBank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=CCO35_RS08695;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 283490 283669 . - . ID=gene-CCO35_RS24325;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=CCO35_RS24325 NZ_NPME01000002.1 Protein Homology CDS 283490 283669 . - 0 ID=cds-WP_371045268.1;Parent=gene-CCO35_RS24325;Dbxref=GenBank:WP_371045268.1;Name=WP_371045268.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=CCO35_RS24325;product=putative translational regulatory protein ArgL;protein_id=WP_371045268.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 283686 284102 . + . ID=gene-CCO35_RS08700;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=CCO35_RS08700;old_locus_tag=CCO35_08695 NZ_NPME01000002.1 Protein Homology CDS 283686 284102 . + 0 ID=cds-WP_000002940.1;Parent=gene-CCO35_RS08700;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=CCO35_RS08700;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 284114 284926 . + . ID=gene-CCO35_RS08705;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=CCO35_RS08705;old_locus_tag=CCO35_08700 NZ_NPME01000002.1 Protein Homology CDS 284114 284926 . + 0 ID=cds-WP_049828541.1;Parent=gene-CCO35_RS08705;Dbxref=GenBank:WP_049828541.1;Name=WP_049828541.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=CCO35_RS08705;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_049828541.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 285161 285649 . - . ID=gene-CCO35_RS08710;Name=CCO35_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08710;old_locus_tag=CCO35_08705 NZ_NPME01000002.1 Protein Homology CDS 285161 285649 . - 0 ID=cds-WP_031568797.1;Parent=gene-CCO35_RS08710;Dbxref=GenBank:WP_031568797.1;Name=WP_031568797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=CCO35_RS08710;product=DUF3617 domain-containing protein;protein_id=WP_031568797.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 285756 286259 . - . ID=gene-CCO35_RS08715;Name=CCO35_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08715;old_locus_tag=CCO35_08710 NZ_NPME01000002.1 Protein Homology CDS 285756 286259 . - 0 ID=cds-WP_001519079.1;Parent=gene-CCO35_RS08715;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=CCO35_RS08715;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 286454 287641 . + . ID=gene-CCO35_RS08720;Name=CCO35_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08720;old_locus_tag=CCO35_08715 NZ_NPME01000002.1 Protein Homology CDS 286454 287641 . + 0 ID=cds-WP_001066974.1;Parent=gene-CCO35_RS08720;Dbxref=GenBank:WP_001066974.1;Name=WP_001066974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=CCO35_RS08720;product=YjgN family protein;protein_id=WP_001066974.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 287783 290638 . - . ID=gene-CCO35_RS08725;Name=CCO35_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08725;old_locus_tag=CCO35_08720 NZ_NPME01000002.1 Protein Homology CDS 287783 290638 . - 0 ID=cds-WP_000416436.1;Parent=gene-CCO35_RS08725;Dbxref=GenBank:WP_000416436.1;Name=WP_000416436.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=CCO35_RS08725;product=valine--tRNA ligase;protein_id=WP_000416436.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 290638 291081 . - . ID=gene-CCO35_RS08730;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=CCO35_RS08730;old_locus_tag=CCO35_08725 NZ_NPME01000002.1 Protein Homology CDS 290638 291081 . - 0 ID=cds-WP_001523689.1;Parent=gene-CCO35_RS08730;Dbxref=GenBank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=CCO35_RS08730;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 291218 292729 . - . ID=gene-CCO35_RS08735;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=CCO35_RS08735;old_locus_tag=CCO35_08730 NZ_NPME01000002.1 Protein Homology CDS 291218 292729 . - 0 ID=cds-WP_000397158.1;Parent=gene-CCO35_RS08735;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=CCO35_RS08735;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 293010 293060 . + . ID=gene-CCO35_RS24020;Name=CCO35_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24020 NZ_NPME01000002.1 Protein Homology CDS 293010 293060 . + 0 ID=cds-WP_212724070.1;Parent=gene-CCO35_RS24020;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=CCO35_RS24020;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 293124 294224 . + . ID=gene-CCO35_RS08750;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=CCO35_RS08750;old_locus_tag=CCO35_08745 NZ_NPME01000002.1 Protein Homology CDS 293124 294224 . + 0 ID=cds-WP_000584132.1;Parent=gene-CCO35_RS08750;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=CCO35_RS08750;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 294224 295306 . + . ID=gene-CCO35_RS08755;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=CCO35_RS08755;old_locus_tag=CCO35_08750 NZ_NPME01000002.1 Protein Homology CDS 294224 295306 . + 0 ID=cds-WP_001182242.1;Parent=gene-CCO35_RS08755;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=CCO35_RS08755;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 295501 296499 . - . ID=gene-CCO35_RS08760;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=CCO35_RS08760;old_locus_tag=CCO35_08755 NZ_NPME01000002.1 Protein Homology CDS 295501 296499 . - 0 ID=cds-WP_001244061.1;Parent=gene-CCO35_RS08760;Dbxref=GenBank:WP_001244061.1;Name=WP_001244061.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=CCO35_RS08760;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244061.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 296563 297882 . - . ID=gene-CCO35_RS08765;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=CCO35_RS08765;old_locus_tag=CCO35_08760 NZ_NPME01000002.1 Protein Homology CDS 296563 297882 . - 0 ID=cds-WP_001128356.1;Parent=gene-CCO35_RS08765;Dbxref=GenBank:WP_001128356.1;Name=WP_001128356.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=CCO35_RS08765;product=gnt-II system L-idonate transporter;protein_id=WP_001128356.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 297944 298708 . - . ID=gene-CCO35_RS08770;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=CCO35_RS08770;old_locus_tag=CCO35_08765 NZ_NPME01000002.1 Protein Homology CDS 297944 298708 . - 0 ID=cds-WP_000998688.1;Parent=gene-CCO35_RS08770;Dbxref=GenBank:WP_000998688.1;Name=WP_000998688.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=CCO35_RS08770;product=gluconate 5-dehydrogenase;protein_id=WP_000998688.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 298733 299764 . - . ID=gene-CCO35_RS08775;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=CCO35_RS08775;old_locus_tag=CCO35_08770 NZ_NPME01000002.1 Protein Homology CDS 298733 299764 . - 0 ID=cds-WP_000453343.1;Parent=gene-CCO35_RS08775;Dbxref=GenBank:WP_000453343.1;Name=WP_000453343.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=CCO35_RS08775;product=L-idonate 5-dehydrogenase;protein_id=WP_000453343.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 299981 300511 . + . ID=gene-CCO35_RS08780;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=CCO35_RS08780;old_locus_tag=CCO35_08775 NZ_NPME01000002.1 Protein Homology CDS 299981 300511 . + 0 ID=cds-WP_000896758.1;Parent=gene-CCO35_RS08780;Dbxref=GenBank:WP_000896758.1;Name=WP_000896758.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=CCO35_RS08780;product=gluconokinase;protein_id=WP_000896758.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 300539 301558 . - . ID=gene-CCO35_RS08785;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=CCO35_RS08785;old_locus_tag=CCO35_08780 NZ_NPME01000002.1 Protein Homology CDS 300539 301558 . - 0 ID=cds-WP_024797441.1;Parent=gene-CCO35_RS08785;Dbxref=GenBank:WP_024797441.1;Name=WP_024797441.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=CCO35_RS08785;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_024797441.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 301781 301865 . + . ID=gene-CCO35_RS08790;Name=CCO35_RS08790;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS08790;old_locus_tag=CCO35_08785 NZ_NPME01000002.1 tRNAscan-SE tRNA 301781 301865 . + . ID=rna-CCO35_RS08790;Parent=gene-CCO35_RS08790;anticodon=(pos:301815..301817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS08790;product=tRNA-Leu NZ_NPME01000002.1 tRNAscan-SE exon 301781 301865 . + . ID=exon-CCO35_RS08790-1;Parent=rna-CCO35_RS08790;anticodon=(pos:301815..301817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS08790;product=tRNA-Leu NZ_NPME01000002.1 RefSeq gene 302343 302567 . + . ID=gene-CCO35_RS08800;Name=CCO35_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08800;old_locus_tag=CCO35_08795 NZ_NPME01000002.1 Protein Homology CDS 302343 302567 . + 0 ID=cds-WP_031233173.1;Parent=gene-CCO35_RS08800;Dbxref=GenBank:WP_031233173.1;Name=WP_031233173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155191.1;locus_tag=CCO35_RS08800;product=CopG family ribbon-helix-helix protein;protein_id=WP_031233173.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 302676 302915 . + . ID=gene-CCO35_RS08805;Name=CCO35_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08805;old_locus_tag=CCO35_08800 NZ_NPME01000002.1 Protein Homology CDS 302676 302915 . + 0 ID=cds-WP_000016244.1;Parent=gene-CCO35_RS08805;Dbxref=GenBank:WP_000016244.1;Name=WP_000016244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=CCO35_RS08805;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_000016244.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 302918 303226 . + . ID=gene-CCO35_RS08810;Name=CCO35_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08810;old_locus_tag=CCO35_08805 NZ_NPME01000002.1 Protein Homology CDS 302918 303226 . + 0 ID=cds-WP_001199743.1;Parent=gene-CCO35_RS08810;Dbxref=GenBank:WP_001199743.1;Name=WP_001199743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=CCO35_RS08810;product=CcdB family protein;protein_id=WP_001199743.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 303661 303962 . + . ID=gene-CCO35_RS08815;Name=CCO35_RS08815;end_range=303962,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS08815;old_locus_tag=CCO35_08810;partial=true;pseudo=true NZ_NPME01000002.1 Protein Homology CDS 303661 303962 . + 0 ID=cds-CCO35_RS08815;Parent=gene-CCO35_RS08815;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=303962,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=CCO35_RS08815;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_NPME01000002.1 RefSeq gene 304324 307839 . + . ID=gene-CCO35_RS08820;Name=CCO35_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08820;old_locus_tag=CCO35_08815 NZ_NPME01000002.1 Protein Homology CDS 304324 307839 . + 0 ID=cds-WP_000342547.1;Parent=gene-CCO35_RS08820;Dbxref=GenBank:WP_000342547.1;Name=WP_000342547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=CCO35_RS08820;product=AAA domain-containing protein;protein_id=WP_000342547.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 307980 308282 . + . ID=gene-CCO35_RS08825;Name=CCO35_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08825;old_locus_tag=CCO35_08820 NZ_NPME01000002.1 Protein Homology CDS 307980 308282 . + 0 ID=cds-WP_024146607.1;Parent=gene-CCO35_RS08825;Dbxref=GenBank:WP_024146607.1;Name=WP_024146607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616541.1;locus_tag=CCO35_RS08825;product=hypothetical protein;protein_id=WP_024146607.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 308330 311707 . - . ID=gene-CCO35_RS08830;Name=CCO35_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08830;old_locus_tag=CCO35_08825 NZ_NPME01000002.1 Protein Homology CDS 308330 311707 . - 0 ID=cds-WP_080097121.1;Parent=gene-CCO35_RS08830;Dbxref=GenBank:WP_080097121.1;Name=WP_080097121.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395336.1;locus_tag=CCO35_RS08830;product=DEAD/DEAH box helicase family protein;protein_id=WP_080097121.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 311710 315027 . - . ID=gene-CCO35_RS08835;Name=CCO35_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08835;old_locus_tag=CCO35_08830 NZ_NPME01000002.1 Protein Homology CDS 311710 315027 . - 0 ID=cds-WP_094965334.1;Parent=gene-CCO35_RS08835;Dbxref=GenBank:WP_094965334.1;Name=WP_094965334.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049823.1;locus_tag=CCO35_RS08835;product=DNA methyltransferase;protein_id=WP_094965334.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 315048 317939 . - . ID=gene-CCO35_RS08840;Name=CCO35_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08840;old_locus_tag=CCO35_08835 NZ_NPME01000002.1 Protein Homology CDS 315048 317939 . - 0 ID=cds-WP_000580535.1;Parent=gene-CCO35_RS08840;Dbxref=GenBank:WP_000580535.1;Name=WP_000580535.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230790.1;locus_tag=CCO35_RS08840;product=SNF2-related protein;protein_id=WP_000580535.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 318115 318942 . + . ID=gene-CCO35_RS08845;Name=CCO35_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08845;old_locus_tag=CCO35_08840 NZ_NPME01000002.1 GeneMarkS-2+ CDS 318115 318942 . + 0 ID=cds-WP_223617493.1;Parent=gene-CCO35_RS08845;Dbxref=GenBank:WP_223617493.1;Name=WP_223617493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS08845;product=hypothetical protein;protein_id=WP_223617493.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 318945 320648 . + . ID=gene-CCO35_RS08850;Name=CCO35_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08850;old_locus_tag=CCO35_08845 NZ_NPME01000002.1 Protein Homology CDS 318945 320648 . + 0 ID=cds-WP_024151736.1;Parent=gene-CCO35_RS08850;Dbxref=GenBank:WP_024151736.1;Name=WP_024151736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285945.1;locus_tag=CCO35_RS08850;product=membrane protein;protein_id=WP_024151736.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 320620 322350 . + . ID=gene-CCO35_RS08855;Name=CCO35_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08855;old_locus_tag=CCO35_08850 NZ_NPME01000002.1 Protein Homology CDS 320620 322350 . + 0 ID=cds-WP_000434625.1;Parent=gene-CCO35_RS08855;Dbxref=GenBank:WP_000434625.1;Name=WP_000434625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000434625.1;locus_tag=CCO35_RS08855;product=LeoA/HP0731 family dynamin-like GTPase;protein_id=WP_000434625.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 322531 323760 . + . ID=gene-CCO35_RS08860;Name=CCO35_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08860;old_locus_tag=CCO35_08855 NZ_NPME01000002.1 Protein Homology CDS 322531 323760 . + 0 ID=cds-WP_024146610.1;Parent=gene-CCO35_RS08860;Dbxref=GenBank:WP_024146610.1;Name=WP_024146610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000252893.1;locus_tag=CCO35_RS08860;product=DUF6361 family protein;protein_id=WP_024146610.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 323754 325550 . + . ID=gene-CCO35_RS08865;Name=CCO35_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08865;old_locus_tag=CCO35_08860 NZ_NPME01000002.1 Protein Homology CDS 323754 325550 . + 0 ID=cds-WP_000933952.1;Parent=gene-CCO35_RS08865;Dbxref=GenBank:WP_000933952.1;Name=WP_000933952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933952.1;locus_tag=CCO35_RS08865;product=phospholipase D family protein;protein_id=WP_000933952.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 325540 328689 . + . ID=gene-CCO35_RS08870;Name=CCO35_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08870;old_locus_tag=CCO35_08865 NZ_NPME01000002.1 Protein Homology CDS 325540 328689 . + 0 ID=cds-WP_000763887.1;Parent=gene-CCO35_RS08870;Dbxref=GenBank:WP_000763887.1;Name=WP_000763887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763887.1;locus_tag=CCO35_RS08870;product=helicase-related protein;protein_id=WP_000763887.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 329301 330176 . + . ID=gene-CCO35_RS08875;Name=CCO35_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08875;old_locus_tag=CCO35_08870 NZ_NPME01000002.1 Protein Homology CDS 329301 330176 . + 0 ID=cds-WP_000199874.1;Parent=gene-CCO35_RS08875;Dbxref=GenBank:WP_000199874.1;Name=WP_000199874.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=CCO35_RS08875;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=WP_000199874.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 330654 331370 . - . ID=gene-CCO35_RS08880;Name=CCO35_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08880;old_locus_tag=CCO35_08875 NZ_NPME01000002.1 Protein Homology CDS 330654 331370 . - 0 ID=cds-WP_000532939.1;Parent=gene-CCO35_RS08880;Dbxref=GenBank:WP_000532939.1;Name=WP_000532939.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=CCO35_RS08880;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 331930 333561 . - . ID=gene-CCO35_RS08890;Name=CCO35_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08890;old_locus_tag=CCO35_08885 NZ_NPME01000002.1 Protein Homology CDS 331930 333561 . - 0 ID=cds-WP_094965335.1;Parent=gene-CCO35_RS08890;Dbxref=GenBank:WP_094965335.1;Name=WP_094965335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=CCO35_RS08890;product=class I SAM-dependent methyltransferase;protein_id=WP_094965335.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 333566 333823 . - . ID=gene-CCO35_RS08895;Name=CCO35_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08895;old_locus_tag=CCO35_08890 NZ_NPME01000002.1 Protein Homology CDS 333566 333823 . - 0 ID=cds-WP_001054380.1;Parent=gene-CCO35_RS08895;Dbxref=GenBank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=CCO35_RS08895;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 334311 334919 . + . ID=gene-CCO35_RS08905;Name=CCO35_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08905;old_locus_tag=CCO35_08900 NZ_NPME01000002.1 Protein Homology CDS 334311 334919 . + 0 ID=cds-WP_000864859.1;Parent=gene-CCO35_RS08905;Dbxref=GenBank:WP_000864859.1;Name=WP_000864859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=CCO35_RS08905;product=DUF1062 domain-containing protein;protein_id=WP_000864859.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 335271 336182 . + . ID=gene-CCO35_RS08910;Name=CCO35_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08910;old_locus_tag=CCO35_08905 NZ_NPME01000002.1 Protein Homology CDS 335271 336182 . + 0 ID=cds-WP_000556785.1;Parent=gene-CCO35_RS08910;Dbxref=GenBank:WP_000556785.1;Name=WP_000556785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=CCO35_RS08910;product=STM4504/CBY_0614 family protein;protein_id=WP_000556785.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 336387 336848 . + . ID=gene-CCO35_RS08915;Name=CCO35_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08915;old_locus_tag=CCO35_08910 NZ_NPME01000002.1 Protein Homology CDS 336387 336848 . + 0 ID=cds-WP_001642121.1;Parent=gene-CCO35_RS08915;Dbxref=GenBank:WP_001642121.1;Name=WP_001642121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=CCO35_RS08915;product=DUF302 domain-containing protein;protein_id=WP_001642121.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 336845 337519 . - . ID=gene-CCO35_RS08920;Name=CCO35_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08920;old_locus_tag=CCO35_08915 NZ_NPME01000002.1 Protein Homology CDS 336845 337519 . - 0 ID=cds-WP_000588686.1;Parent=gene-CCO35_RS08920;Dbxref=GenBank:WP_000588686.1;Name=WP_000588686.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=CCO35_RS08920;product=dienelactone hydrolase family protein;protein_id=WP_000588686.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 337869 338642 . + . ID=gene-CCO35_RS08930;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=CCO35_RS08930;old_locus_tag=CCO35_08925 NZ_NPME01000002.1 Protein Homology CDS 337869 338642 . + 0 ID=cds-WP_000841654.1;Parent=gene-CCO35_RS08930;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=CCO35_RS08930;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 338643 339656 . - . ID=gene-CCO35_RS08935;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO35_RS08935;old_locus_tag=CCO35_08930 NZ_NPME01000002.1 Protein Homology CDS 338643 339656 . - 0 ID=cds-WP_001094619.1;Parent=gene-CCO35_RS08935;Dbxref=GenBank:WP_001094619.1;Name=WP_001094619.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=CCO35_RS08935;product=tryptophan--tRNA ligase;protein_id=WP_001094619.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 340374 340904 . + . ID=gene-CCO35_RS08940;Name=CCO35_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08940;old_locus_tag=CCO35_08935 NZ_NPME01000002.1 Protein Homology CDS 340374 340904 . + 0 ID=cds-WP_000907671.1;Parent=gene-CCO35_RS08940;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=CCO35_RS08940;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 341143 341877 . + . ID=gene-CCO35_RS08950;Name=CCO35_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08950;old_locus_tag=CCO35_08945 NZ_NPME01000002.1 Protein Homology CDS 341143 341877 . + 0 ID=cds-WP_000683243.1;Parent=gene-CCO35_RS08950;Dbxref=GenBank:WP_000683243.1;Name=WP_000683243.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=CCO35_RS08950;product=aspartate/glutamate racemase family protein;protein_id=WP_000683243.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 341883 342791 . - . ID=gene-CCO35_RS08955;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=CCO35_RS08955;old_locus_tag=CCO35_08950 NZ_NPME01000002.1 Protein Homology CDS 341883 342791 . - 0 ID=cds-WP_000383509.1;Parent=gene-CCO35_RS08955;Dbxref=GenBank:WP_000383509.1;Name=WP_000383509.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=CCO35_RS08955;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383509.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 342910 344082 . - . ID=gene-CCO35_RS08960;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=CCO35_RS08960;old_locus_tag=CCO35_08955 NZ_NPME01000002.1 Protein Homology CDS 342910 344082 . - 0 ID=cds-WP_001113050.1;Parent=gene-CCO35_RS08960;Dbxref=GenBank:WP_001113050.1;Name=WP_001113050.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=CCO35_RS08960;product=beta-aspartyl-peptidase;protein_id=WP_001113050.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 344095 344556 . - . ID=gene-CCO35_RS08965;Name=CCO35_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08965;old_locus_tag=CCO35_08960 NZ_NPME01000002.1 Protein Homology CDS 344095 344556 . - 0 ID=cds-WP_000211979.1;Parent=gene-CCO35_RS08965;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=CCO35_RS08965;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 344553 345224 . - . ID=gene-CCO35_RS08970;Name=CCO35_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08970;old_locus_tag=CCO35_08965 NZ_NPME01000002.1 Protein Homology CDS 344553 345224 . - 0 ID=cds-WP_000068752.1;Parent=gene-CCO35_RS08970;Dbxref=GenBank:WP_000068752.1;Name=WP_000068752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=CCO35_RS08970;product=nucleoside recognition domain-containing protein;protein_id=WP_000068752.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 346093 347277 . - . ID=gene-CCO35_RS08975;Name=CCO35_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08975;old_locus_tag=CCO35_08970 NZ_NPME01000002.1 Protein Homology CDS 346093 347277 . - 0 ID=cds-WP_031568870.1;Parent=gene-CCO35_RS08975;Dbxref=GenBank:WP_031568870.1;Name=WP_031568870.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=CCO35_RS08975;product=MFS transporter;protein_id=WP_031568870.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 347486 348757 . - . ID=gene-CCO35_RS08980;Name=CCO35_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08980;old_locus_tag=CCO35_08975 NZ_NPME01000002.1 Protein Homology CDS 347486 348757 . - 0 ID=cds-WP_001033023.1;Parent=gene-CCO35_RS08980;Dbxref=GenBank:WP_001033023.1;Name=WP_001033023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=CCO35_RS08980;product=DUF445 domain-containing protein;protein_id=WP_001033023.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 348844 350085 . - . ID=gene-CCO35_RS08985;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=CCO35_RS08985;old_locus_tag=CCO35_08980 NZ_NPME01000002.1 Protein Homology CDS 348844 350085 . - 0 ID=cds-WP_001188918.1;Parent=gene-CCO35_RS08985;Dbxref=GenBank:WP_001188918.1;Name=WP_001188918.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=CCO35_RS08985;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001188918.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 350564 351517 . + . ID=gene-CCO35_RS08990;Name=CCO35_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08990;old_locus_tag=CCO35_08985 NZ_NPME01000002.1 Protein Homology CDS 350564 351517 . + 0 ID=cds-WP_000750005.1;Parent=gene-CCO35_RS08990;Dbxref=GenBank:WP_000750005.1;Name=WP_000750005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=CCO35_RS08990;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000750005.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 351514 351657 . - . ID=gene-CCO35_RS23805;Name=CCO35_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23805 NZ_NPME01000002.1 GeneMarkS-2+ CDS 351514 351657 . - 0 ID=cds-WP_153247006.1;Parent=gene-CCO35_RS23805;Dbxref=GenBank:WP_153247006.1;Name=WP_153247006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS23805;product=hypothetical protein;protein_id=WP_153247006.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 351698 353068 . + . ID=gene-CCO35_RS08995;Name=CCO35_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS08995;old_locus_tag=CCO35_08990 NZ_NPME01000002.1 Protein Homology CDS 351698 353068 . + 0 ID=cds-WP_000331434.1;Parent=gene-CCO35_RS08995;Dbxref=GenBank:WP_000331434.1;Name=WP_000331434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=CCO35_RS08995;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000331434.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 353166 353306 . - . ID=gene-CCO35_RS09000;Name=CCO35_RS09000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS09000;old_locus_tag=CCO35_08995;partial=true;pseudo=true;start_range=.,353166 NZ_NPME01000002.1 Protein Homology CDS 353166 353306 . - 0 ID=cds-CCO35_RS09000;Parent=gene-CCO35_RS09000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=CCO35_RS09000;partial=true;product=hypothetical protein;pseudo=true;start_range=.,353166;transl_table=11 NZ_NPME01000002.1 RefSeq gene 353273 353437 . + . ID=gene-CCO35_RS09005;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=CCO35_RS09005;old_locus_tag=CCO35_09000 NZ_NPME01000002.1 Protein Homology CDS 353273 353437 . + 0 ID=cds-WP_000397916.1;Parent=gene-CCO35_RS09005;Dbxref=GenBank:WP_000397916.1;Name=WP_000397916.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=CCO35_RS09005;product=DUF1127 domain-containing protein YjiS;protein_id=WP_000397916.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 353514 354434 . - . ID=gene-CCO35_RS09010;Name=CCO35_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09010;old_locus_tag=CCO35_09005 NZ_NPME01000002.1 Protein Homology CDS 353514 354434 . - 0 ID=cds-WP_031568878.1;Parent=gene-CCO35_RS09010;Dbxref=GenBank:WP_031568878.1;Name=WP_031568878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=CCO35_RS09010;product=DUF5655 domain-containing protein;protein_id=WP_031568878.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 354845 355486 . - . ID=gene-CCO35_RS09015;Name=CCO35_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09015;old_locus_tag=CCO35_09010 NZ_NPME01000002.1 Protein Homology CDS 354845 355486 . - 0 ID=cds-WP_000438685.1;Parent=gene-CCO35_RS09015;Dbxref=GenBank:WP_000438685.1;Name=WP_000438685.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727645.1;locus_tag=CCO35_RS09015;product=LysE family translocator;protein_id=WP_000438685.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 355534 356349 . - . ID=gene-CCO35_RS09020;Name=CCO35_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09020;old_locus_tag=CCO35_09015 NZ_NPME01000002.1 Protein Homology CDS 355534 356349 . - 0 ID=cds-WP_001128427.1;Parent=gene-CCO35_RS09020;Dbxref=GenBank:WP_001128427.1;Name=WP_001128427.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001128428.1;locus_tag=CCO35_RS09020;product=AraC family transcriptional regulator;protein_id=WP_001128427.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 356386 357342 . - . ID=gene-CCO35_RS09025;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=CCO35_RS09025;old_locus_tag=CCO35_09020 NZ_NPME01000002.1 Protein Homology CDS 356386 357342 . - 0 ID=cds-WP_000187838.1;Parent=gene-CCO35_RS09025;Dbxref=GenBank:WP_000187838.1;Name=WP_000187838.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=CCO35_RS09025;product=GTPase;protein_id=WP_000187838.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 357353 357556 . - . ID=gene-CCO35_RS09030;Name=CCO35_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09030;old_locus_tag=CCO35_09025 NZ_NPME01000002.1 Protein Homology CDS 357353 357556 . - 0 ID=cds-WP_000460616.1;Parent=gene-CCO35_RS09030;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=CCO35_RS09030;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 357651 359801 . - . ID=gene-CCO35_RS09035;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=CCO35_RS09035;old_locus_tag=CCO35_09030 NZ_NPME01000002.1 Protein Homology CDS 357651 359801 . - 0 ID=cds-WP_000379929.1;Parent=gene-CCO35_RS09035;Dbxref=GenBank:WP_000379929.1;Name=WP_000379929.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=CCO35_RS09035;product=pyruvate/proton symporter BtsT;protein_id=WP_000379929.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 360168 361829 . + . ID=gene-CCO35_RS09040;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=CCO35_RS09040;old_locus_tag=CCO35_09035 NZ_NPME01000002.1 Protein Homology CDS 360168 361829 . + 0 ID=cds-WP_000919524.1;Parent=gene-CCO35_RS09040;Dbxref=GenBank:WP_000919524.1;Name=WP_000919524.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=CCO35_RS09040;product=methyl-accepting chemotaxis protein;protein_id=WP_000919524.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 361941 362015 . - . ID=gene-CCO35_RS24030;Name=CCO35_RS24030;end_range=362015,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24030;partial=true;pseudo=true NZ_NPME01000002.1 Protein Homology CDS 361941 362015 . - 0 ID=cds-CCO35_RS24030;Parent=gene-CCO35_RS24030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=362015,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134222.1;locus_tag=CCO35_RS24030;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_NPME01000002.1 RefSeq gene 362152 364917 . + . ID=gene-CCO35_RS09045;Name=CCO35_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09045;old_locus_tag=CCO35_09040 NZ_NPME01000002.1 Protein Homology CDS 362152 364917 . + 0 ID=cds-WP_001224220.1;Parent=gene-CCO35_RS09045;Dbxref=GenBank:WP_001224220.1;Name=WP_001224220.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=CCO35_RS09045;product=sigma 54-interacting transcriptional regulator;protein_id=WP_001224220.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 365019 365441 . + . ID=gene-CCO35_RS09050;Name=CCO35_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09050;old_locus_tag=CCO35_09045 NZ_NPME01000002.1 Protein Homology CDS 365019 365441 . + 0 ID=cds-WP_000820693.1;Parent=gene-CCO35_RS09050;Dbxref=GenBank:WP_000820693.1;Name=WP_000820693.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=CCO35_RS09050;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 365456 365917 . + . ID=gene-CCO35_RS09055;Name=CCO35_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09055;old_locus_tag=CCO35_09050 NZ_NPME01000002.1 Protein Homology CDS 365456 365917 . + 0 ID=cds-WP_000634729.1;Parent=gene-CCO35_RS09055;Dbxref=GenBank:WP_000634729.1;Name=WP_000634729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=CCO35_RS09055;product=PTS sugar transporter subunit IIB;protein_id=WP_000634729.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 365943 366722 . + . ID=gene-CCO35_RS09060;Name=CCO35_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09060;old_locus_tag=CCO35_09055 NZ_NPME01000002.1 Protein Homology CDS 365943 366722 . + 0 ID=cds-WP_000228866.1;Parent=gene-CCO35_RS09060;Dbxref=GenBank:WP_000228866.1;Name=WP_000228866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=CCO35_RS09060;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000228866.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 366700 367548 . + . ID=gene-CCO35_RS09065;Name=CCO35_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09065;old_locus_tag=CCO35_09060 NZ_NPME01000002.1 Protein Homology CDS 366700 367548 . + 0 ID=cds-WP_000178065.1;Parent=gene-CCO35_RS09065;Dbxref=GenBank:WP_000178065.1;Name=WP_000178065.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=CCO35_RS09065;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178065.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 367561 368622 . + . ID=gene-CCO35_RS09070;Name=CCO35_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09070;old_locus_tag=CCO35_09065 NZ_NPME01000002.1 Protein Homology CDS 367561 368622 . + 0 ID=cds-WP_000075418.1;Parent=gene-CCO35_RS09070;Dbxref=GenBank:WP_000075418.1;Name=WP_000075418.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=CCO35_RS09070;product=SIS domain-containing protein;protein_id=WP_000075418.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 368640 369650 . + . ID=gene-CCO35_RS09075;Name=CCO35_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09075;old_locus_tag=CCO35_09070 NZ_NPME01000002.1 Protein Homology CDS 368640 369650 . + 0 ID=cds-WP_000900319.1;Parent=gene-CCO35_RS09075;Dbxref=GenBank:WP_000900319.1;Name=WP_000900319.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=CCO35_RS09075;product=SIS domain-containing protein;protein_id=WP_000900319.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 369784 372075 . - . ID=gene-CCO35_RS09080;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=CCO35_RS09080;old_locus_tag=CCO35_09075 NZ_NPME01000002.1 Protein Homology CDS 369784 372075 . - 0 ID=cds-WP_001292720.1;Parent=gene-CCO35_RS09080;Dbxref=GenBank:WP_001292720.1;Name=WP_001292720.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=CCO35_RS09080;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292720.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 372358 372849 . - . ID=gene-CCO35_RS09085;Name=CCO35_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09085;old_locus_tag=CCO35_09080 NZ_NPME01000002.1 Protein Homology CDS 372358 372849 . - 0 ID=cds-WP_001090316.1;Parent=gene-CCO35_RS09085;Dbxref=GenBank:WP_001090316.1;Name=WP_001090316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=CCO35_RS09085;product=DUF2501 domain-containing protein;protein_id=WP_001090316.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 372907 373644 . - . ID=gene-CCO35_RS09090;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=CCO35_RS09090;old_locus_tag=CCO35_09085 NZ_NPME01000002.1 Protein Homology CDS 372907 373644 . - 0 ID=cds-WP_000799924.1;Parent=gene-CCO35_RS09090;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=CCO35_RS09090;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 373647 374186 . - . ID=gene-CCO35_RS09095;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=CCO35_RS09095;old_locus_tag=CCO35_09090 NZ_NPME01000002.1 Protein Homology CDS 373647 374186 . - 0 ID=cds-WP_000098578.1;Parent=gene-CCO35_RS09095;Dbxref=GenBank:WP_000098578.1;Name=WP_000098578.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=CCO35_RS09095;product=primosomal protein DnaT;protein_id=WP_000098578.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 374279 374752 . - . ID=gene-CCO35_RS09100;Name=CCO35_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09100;old_locus_tag=CCO35_09095 NZ_NPME01000002.1 Protein Homology CDS 374279 374752 . - 0 ID=cds-WP_000511329.1;Parent=gene-CCO35_RS09100;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=CCO35_RS09100;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 374743 375519 . - . ID=gene-CCO35_RS09105;Name=CCO35_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09105;old_locus_tag=CCO35_09100 NZ_NPME01000002.1 Protein Homology CDS 374743 375519 . - 0 ID=cds-WP_001665630.1;Parent=gene-CCO35_RS09105;Dbxref=GenBank:WP_001665630.1;Name=WP_001665630.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=CCO35_RS09105;product=threonine/serine ThrE exporter family protein;protein_id=WP_001665630.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 376231 376956 . + . ID=gene-CCO35_RS09110;Name=CCO35_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09110;old_locus_tag=CCO35_09105 NZ_NPME01000002.1 Protein Homology CDS 376231 376956 . + 0 ID=cds-WP_000936659.1;Parent=gene-CCO35_RS09110;Dbxref=GenBank:WP_000936659.1;Name=WP_000936659.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=CCO35_RS09110;product=response regulator transcription factor;protein_id=WP_000936659.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 376917 377591 . + . ID=gene-CCO35_RS09115;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=CCO35_RS09115;old_locus_tag=CCO35_09110 NZ_NPME01000002.1 Protein Homology CDS 376917 377591 . + 0 ID=cds-WP_000431546.1;Parent=gene-CCO35_RS09115;Dbxref=GenBank:WP_000431546.1;Name=WP_000431546.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=CCO35_RS09115;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431546.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 377642 378100 . - . ID=gene-CCO35_RS09120;Name=CCO35_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09120;old_locus_tag=CCO35_09115 NZ_NPME01000002.1 Protein Homology CDS 377642 378100 . - 0 ID=cds-WP_000058271.1;Parent=gene-CCO35_RS09120;Dbxref=GenBank:WP_000058271.1;Name=WP_000058271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=CCO35_RS09120;product=YbaK/EbsC family protein;protein_id=WP_000058271.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 378251 379039 . - . ID=gene-CCO35_RS09125;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=CCO35_RS09125;old_locus_tag=CCO35_09120 NZ_NPME01000002.1 Protein Homology CDS 378251 379039 . - 0 ID=cds-WP_000331537.1;Parent=gene-CCO35_RS09125;Dbxref=GenBank:WP_000331537.1;Name=WP_000331537.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=CCO35_RS09125;product=siderophore-iron reductase FhuF;protein_id=WP_000331537.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 379160 380224 . - . ID=gene-CCO35_RS09130;Name=CCO35_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09130;old_locus_tag=CCO35_09125 NZ_NPME01000002.1 Protein Homology CDS 379160 380224 . - 0 ID=cds-WP_000211204.1;Parent=gene-CCO35_RS09130;Dbxref=GenBank:WP_000211204.1;Name=WP_000211204.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=CCO35_RS09130;product=GGDEF domain-containing protein;protein_id=WP_000211204.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 380475 380711 . + . ID=gene-CCO35_RS09135;Name=CCO35_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09135;old_locus_tag=CCO35_09130 NZ_NPME01000002.1 Protein Homology CDS 380475 380711 . + 0 ID=cds-WP_000941879.1;Parent=gene-CCO35_RS09135;Dbxref=GenBank:WP_000941879.1;Name=WP_000941879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=CCO35_RS09135;product=DUF1435 domain-containing protein;protein_id=WP_000941879.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 380743 380829 . - . ID=gene-CCO35_RS09140;Name=CCO35_RS09140;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS09140;old_locus_tag=CCO35_09135 NZ_NPME01000002.1 tRNAscan-SE tRNA 380743 380829 . - . ID=rna-CCO35_RS09140;Parent=gene-CCO35_RS09140;anticodon=(pos:complement(380793..380795));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS09140;product=tRNA-Leu NZ_NPME01000002.1 tRNAscan-SE exon 380743 380829 . - . ID=exon-CCO35_RS09140-1;Parent=rna-CCO35_RS09140;anticodon=(pos:complement(380793..380795));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS09140;product=tRNA-Leu NZ_NPME01000002.1 RefSeq gene 380861 380947 . - . ID=gene-CCO35_RS09145;Name=CCO35_RS09145;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS09145;old_locus_tag=CCO35_09140 NZ_NPME01000002.1 tRNAscan-SE tRNA 380861 380947 . - . ID=rna-CCO35_RS09145;Parent=gene-CCO35_RS09145;anticodon=(pos:complement(380911..380913));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS09145;product=tRNA-Leu NZ_NPME01000002.1 tRNAscan-SE exon 380861 380947 . - . ID=exon-CCO35_RS09145-1;Parent=rna-CCO35_RS09145;anticodon=(pos:complement(380911..380913));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS09145;product=tRNA-Leu NZ_NPME01000002.1 RefSeq gene 380975 381061 . - . ID=gene-CCO35_RS09150;Name=CCO35_RS09150;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS09150;old_locus_tag=CCO35_09145 NZ_NPME01000002.1 tRNAscan-SE tRNA 380975 381061 . - . ID=rna-CCO35_RS09150;Parent=gene-CCO35_RS09150;anticodon=(pos:complement(381025..381027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS09150;product=tRNA-Leu NZ_NPME01000002.1 tRNAscan-SE exon 380975 381061 . - . ID=exon-CCO35_RS09150-1;Parent=rna-CCO35_RS09150;anticodon=(pos:complement(381025..381027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS09150;product=tRNA-Leu NZ_NPME01000002.1 RefSeq gene 381252 382280 . - . ID=gene-CCO35_RS09155;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=CCO35_RS09155;old_locus_tag=CCO35_09150 NZ_NPME01000002.1 Protein Homology CDS 381252 382280 . - 0 ID=cds-WP_001272285.1;Parent=gene-CCO35_RS09155;Dbxref=GenBank:WP_001272285.1;Name=WP_001272285.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=CCO35_RS09155;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272285.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 382383 382820 . + . ID=gene-CCO35_RS09160;Name=CCO35_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09160;old_locus_tag=CCO35_09155 NZ_NPME01000002.1 Protein Homology CDS 382383 382820 . + 0 ID=cds-WP_031570628.1;Parent=gene-CCO35_RS09160;Dbxref=GenBank:WP_031570628.1;Name=WP_031570628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=CCO35_RS09160;product=DNA polymerase III subunit psi;protein_id=WP_031570628.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 382765 383211 . + . ID=gene-CCO35_RS09165;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CCO35_RS09165;old_locus_tag=CCO35_09160 NZ_NPME01000002.1 Protein Homology CDS 382765 383211 . + 0 ID=cds-WP_001092434.1;Parent=gene-CCO35_RS09165;Dbxref=GenBank:WP_001092434.1;Name=WP_001092434.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=CCO35_RS09165;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092434.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 383233 383910 . + . ID=gene-CCO35_RS09170;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=CCO35_RS09170;old_locus_tag=CCO35_09165 NZ_NPME01000002.1 Protein Homology CDS 383233 383910 . + 0 ID=cds-WP_000870686.1;Parent=gene-CCO35_RS09170;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=CCO35_RS09170;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 384002 385591 . + . ID=gene-CCO35_RS09175;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=CCO35_RS09175;old_locus_tag=CCO35_09170 NZ_NPME01000002.1 Protein Homology CDS 384002 385591 . + 0 ID=cds-WP_000175965.1;Parent=gene-CCO35_RS09175;Dbxref=GenBank:WP_000175965.1;Name=WP_000175965.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=CCO35_RS09175;product=peptide chain release factor 3;protein_id=WP_000175965.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 385993 386610 . + . ID=gene-CCO35_RS09180;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO35_RS09180;old_locus_tag=CCO35_09175 NZ_NPME01000002.1 Protein Homology CDS 385993 386610 . + 0 ID=cds-WP_000178963.1;Parent=gene-CCO35_RS09180;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=CCO35_RS09180;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 386739 386900 . + . ID=gene-CCO35_RS09185;Name=CCO35_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09185;old_locus_tag=CCO35_09180 NZ_NPME01000002.1 Protein Homology CDS 386739 386900 . + 0 ID=cds-WP_000490276.1;Parent=gene-CCO35_RS09185;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=CCO35_RS09185;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 387024 388097 . + . ID=gene-CCO35_RS09190;Name=CCO35_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09190;old_locus_tag=CCO35_09185 NZ_NPME01000002.1 Protein Homology CDS 387024 388097 . + 0 ID=cds-WP_000531540.1;Parent=gene-CCO35_RS09190;Dbxref=GenBank:WP_000531540.1;Name=WP_000531540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=CCO35_RS09190;product=patatin-like phospholipase family protein;protein_id=WP_000531540.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 388094 388867 . + . ID=gene-CCO35_RS09195;Name=CCO35_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09195;old_locus_tag=CCO35_09190 NZ_NPME01000002.1 Protein Homology CDS 388094 388867 . + 0 ID=cds-WP_031570623.1;Parent=gene-CCO35_RS09195;Dbxref=GenBank:WP_031570623.1;Name=WP_031570623.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=CCO35_RS09195;product=metal-dependent hydrolase;protein_id=WP_031570623.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 388900 389763 . - . ID=gene-CCO35_RS09200;Name=CCO35_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09200;old_locus_tag=CCO35_09195 NZ_NPME01000002.1 Protein Homology CDS 388900 389763 . - 0 ID=cds-WP_031570622.1;Parent=gene-CCO35_RS09200;Dbxref=GenBank:WP_031570622.1;Name=WP_031570622.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=CCO35_RS09200;product=YjjW family glycine radical enzyme activase;protein_id=WP_031570622.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 389735 391285 . - . ID=gene-CCO35_RS09205;Name=CCO35_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09205;old_locus_tag=CCO35_09200 NZ_NPME01000002.1 Protein Homology CDS 389735 391285 . - 0 ID=cds-WP_001111686.1;Parent=gene-CCO35_RS09205;Dbxref=GenBank:WP_001111686.1;Name=WP_001111686.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=CCO35_RS09205;product=YjjI family glycine radical enzyme;protein_id=WP_001111686.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 391545 392324 . + . ID=gene-CCO35_RS09210;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CCO35_RS09210;old_locus_tag=CCO35_09205 NZ_NPME01000002.1 Protein Homology CDS 391545 392324 . + 0 ID=cds-WP_001519713.1;Parent=gene-CCO35_RS09210;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=CCO35_RS09210;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 392448 393770 . + . ID=gene-CCO35_RS09215;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=CCO35_RS09215;old_locus_tag=CCO35_09210 NZ_NPME01000002.1 Protein Homology CDS 392448 393770 . + 0 ID=cds-WP_000477840.1;Parent=gene-CCO35_RS09215;Dbxref=GenBank:WP_000477840.1;Name=WP_000477840.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=CCO35_RS09215;product=thymidine phosphorylase;protein_id=WP_000477840.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 393822 395045 . + . ID=gene-CCO35_RS09220;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CCO35_RS09220;old_locus_tag=CCO35_09215 NZ_NPME01000002.1 Protein Homology CDS 393822 395045 . + 0 ID=cds-WP_000816454.1;Parent=gene-CCO35_RS09220;Dbxref=GenBank:WP_000816454.1;Name=WP_000816454.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=CCO35_RS09220;product=phosphopentomutase;protein_id=WP_000816454.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 395255 395974 . + . ID=gene-CCO35_RS09225;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CCO35_RS09225;old_locus_tag=CCO35_09220 NZ_NPME01000002.1 Protein Homology CDS 395255 395974 . + 0 ID=cds-WP_000224864.1;Parent=gene-CCO35_RS09225;Dbxref=GenBank:WP_000224864.1;Name=WP_000224864.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=CCO35_RS09225;product=purine-nucleoside phosphorylase;protein_id=WP_000224864.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 396181 396672 . + . ID=gene-CCO35_RS09230;Name=CCO35_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09230;old_locus_tag=CCO35_09225 NZ_NPME01000002.1 Protein Homology CDS 396181 396672 . + 0 ID=cds-WP_094965336.1;Parent=gene-CCO35_RS09230;Dbxref=GenBank:WP_094965336.1;Name=WP_094965336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073959.1;locus_tag=CCO35_RS09230;product=REP-associated tyrosine transposase;protein_id=WP_094965336.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 396757 397773 . - . ID=gene-CCO35_RS09235;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=CCO35_RS09235;old_locus_tag=CCO35_09230 NZ_NPME01000002.1 Protein Homology CDS 396757 397773 . - 0 ID=cds-WP_094965337.1;Parent=gene-CCO35_RS09235;Dbxref=GenBank:WP_094965337.1;Name=WP_094965337.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=CCO35_RS09235;product=lipoate--protein ligase LplA;protein_id=WP_094965337.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 397807 398451 . - . ID=gene-CCO35_RS09240;Name=CCO35_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09240;old_locus_tag=CCO35_09235 NZ_NPME01000002.1 Protein Homology CDS 397807 398451 . - 0 ID=cds-WP_000090067.1;Parent=gene-CCO35_RS09240;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=CCO35_RS09240;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 398568 399536 . + . ID=gene-CCO35_RS09250;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO35_RS09250;old_locus_tag=CCO35_09245 NZ_NPME01000002.1 Protein Homology CDS 398568 399536 . + 0 ID=cds-WP_001132983.1;Parent=gene-CCO35_RS09250;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=CCO35_RS09250;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 399620 401002 . + . ID=gene-CCO35_RS09255;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CCO35_RS09255;old_locus_tag=CCO35_09250 NZ_NPME01000002.1 Protein Homology CDS 399620 401002 . + 0 ID=cds-WP_001029710.1;Parent=gene-CCO35_RS09255;Dbxref=GenBank:WP_001029710.1;Name=WP_001029710.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=CCO35_RS09255;product=DNA repair protein RadA;protein_id=WP_001029710.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 401153 402385 . + . ID=gene-CCO35_RS09260;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=CCO35_RS09260;old_locus_tag=CCO35_09255 NZ_NPME01000002.1 Protein Homology CDS 401153 402385 . + 0 ID=cds-WP_000093829.1;Parent=gene-CCO35_RS09260;Dbxref=GenBank:WP_000093829.1;Name=WP_000093829.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=CCO35_RS09260;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093829.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 402503 404170 . - . ID=gene-CCO35_RS09265;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=CCO35_RS09265;old_locus_tag=CCO35_09260 NZ_NPME01000002.1 Protein Homology CDS 402503 404170 . - 0 ID=cds-WP_000046773.1;Parent=gene-CCO35_RS09265;Dbxref=GenBank:WP_000046773.1;Name=WP_000046773.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=CCO35_RS09265;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046773.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 404346 406316 . + . ID=gene-CCO35_RS09275;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=CCO35_RS09275;old_locus_tag=CCO35_09270 NZ_NPME01000002.1 Protein Homology CDS 404346 406316 . + 0 ID=cds-WP_263298995.1;Parent=gene-CCO35_RS09275;Dbxref=GenBank:WP_263298995.1;Name=WP_263298995.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=CCO35_RS09275;product=murein transglycosylase;protein_id=WP_263298995.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 406374 406700 . + . ID=gene-CCO35_RS09280;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=CCO35_RS09280;old_locus_tag=CCO35_09275 NZ_NPME01000002.1 Protein Homology CDS 406374 406700 . + 0 ID=cds-WP_000192005.1;Parent=gene-CCO35_RS09280;Dbxref=GenBank:WP_000192005.1;Name=WP_000192005.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=CCO35_RS09280;product=trp operon repressor;protein_id=WP_000192005.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 406802 407317 . - . ID=gene-CCO35_RS09285;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=CCO35_RS09285;old_locus_tag=CCO35_09280 NZ_NPME01000002.1 Protein Homology CDS 406802 407317 . - 0 ID=cds-WP_000554307.1;Parent=gene-CCO35_RS09285;Dbxref=GenBank:WP_000554307.1;Name=WP_000554307.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=CCO35_RS09285;product=inosine/xanthosine triphosphatase;protein_id=WP_000554307.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 407366 408013 . + . ID=gene-CCO35_RS09290;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=CCO35_RS09290;old_locus_tag=CCO35_09285 NZ_NPME01000002.1 Protein Homology CDS 407366 408013 . + 0 ID=cds-WP_000942363.1;Parent=gene-CCO35_RS09290;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=CCO35_RS09290;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 408010 408879 . - . ID=gene-CCO35_RS09295;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=CCO35_RS09295;old_locus_tag=CCO35_09290 NZ_NPME01000002.1 Protein Homology CDS 408010 408879 . - 0 ID=cds-WP_000371685.1;Parent=gene-CCO35_RS09295;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=CCO35_RS09295;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 409091 409564 . + . ID=gene-CCO35_RS09300;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=CCO35_RS09300;old_locus_tag=CCO35_09295 NZ_NPME01000002.1 Protein Homology CDS 409091 409564 . + 0 ID=cds-WP_000875811.1;Parent=gene-CCO35_RS09300;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=CCO35_RS09300;product=protein CreA;protein_id=WP_000875811.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 409577 410266 . + . ID=gene-CCO35_RS09305;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=CCO35_RS09305;old_locus_tag=CCO35_09300 NZ_NPME01000002.1 Protein Homology CDS 409577 410266 . + 0 ID=cds-WP_001187050.1;Parent=gene-CCO35_RS09305;Dbxref=GenBank:WP_001187050.1;Name=WP_001187050.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=CCO35_RS09305;product=two-component system response regulator CreB;protein_id=WP_001187050.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 410266 411690 . + . ID=gene-CCO35_RS09310;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=CCO35_RS09310;old_locus_tag=CCO35_09305 NZ_NPME01000002.1 Protein Homology CDS 410266 411690 . + 0 ID=cds-WP_031570599.1;Parent=gene-CCO35_RS09310;Dbxref=GenBank:WP_031570599.1;Name=WP_031570599.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=CCO35_RS09310;product=two-component system sensor histidine kinase CreC;protein_id=WP_031570599.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 411748 413097 . + . ID=gene-CCO35_RS09315;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=CCO35_RS09315;old_locus_tag=CCO35_09310 NZ_NPME01000002.1 Protein Homology CDS 411748 413097 . + 0 ID=cds-WP_000920388.1;Parent=gene-CCO35_RS09315;Dbxref=GenBank:WP_000920388.1;Name=WP_000920388.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=CCO35_RS09315;product=cell envelope integrity protein CreD;protein_id=WP_000920388.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 413155 414240 . - . ID=gene-CCO35_RS09320;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=CCO35_RS09320;old_locus_tag=CCO35_09315 NZ_NPME01000002.1 Protein Homology CDS 413155 414240 . - 0 ID=cds-WP_001253757.1;Parent=gene-CCO35_RS09320;Dbxref=GenBank:WP_001253757.1;Name=WP_001253757.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=CCO35_RS09320;product=fimbrial major subunit SthE;protein_id=WP_001253757.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 414281 414838 . - . ID=gene-CCO35_RS09325;Name=CCO35_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09325;old_locus_tag=CCO35_09320 NZ_NPME01000002.1 Protein Homology CDS 414281 414838 . - 0 ID=cds-WP_001056991.1;Parent=gene-CCO35_RS09325;Dbxref=GenBank:WP_001056991.1;Name=WP_001056991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=CCO35_RS09325;product=fimbrial protein;protein_id=WP_001056991.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 414856 417393 . - . ID=gene-CCO35_RS09330;Name=CCO35_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09330;old_locus_tag=CCO35_09325 NZ_NPME01000002.1 Protein Homology CDS 414856 417393 . - 0 ID=cds-WP_080097089.1;Parent=gene-CCO35_RS09330;Dbxref=GenBank:WP_080097089.1;Name=WP_080097089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=CCO35_RS09330;product=fimbrial outer membrane usher protein;protein_id=WP_080097089.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 417439 418122 . - . ID=gene-CCO35_RS09335;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO35_RS09335;old_locus_tag=CCO35_09330 NZ_NPME01000002.1 Protein Homology CDS 417439 418122 . - 0 ID=cds-WP_000680522.1;Parent=gene-CCO35_RS09335;Dbxref=GenBank:WP_000680522.1;Name=WP_000680522.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=CCO35_RS09335;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680522.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 418193 418738 . - . ID=gene-CCO35_RS09340;Name=CCO35_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09340;old_locus_tag=CCO35_09335 NZ_NPME01000002.1 Protein Homology CDS 418193 418738 . - 0 ID=cds-WP_000482237.1;Parent=gene-CCO35_RS09340;Dbxref=GenBank:WP_000482237.1;Name=WP_000482237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=CCO35_RS09340;product=fimbrial protein;protein_id=WP_000482237.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 419077 419748 . - . ID=gene-CCO35_RS09345;Name=CCO35_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09345;old_locus_tag=CCO35_09340 NZ_NPME01000002.1 Protein Homology CDS 419077 419748 . - 0 ID=cds-WP_000811639.1;Parent=gene-CCO35_RS09345;Dbxref=GenBank:WP_000811639.1;Name=WP_000811639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=CCO35_RS09345;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811639.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 420133 420447 . - . ID=gene-CCO35_RS09350;Name=CCO35_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09350;old_locus_tag=CCO35_09345 NZ_NPME01000002.1 Protein Homology CDS 420133 420447 . - 0 ID=cds-WP_000749515.1;Parent=gene-CCO35_RS09350;Dbxref=GenBank:WP_000749515.1;Name=WP_000749515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=CCO35_RS09350;product=hypothetical protein;protein_id=WP_000749515.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 420714 421430 . - . ID=gene-CCO35_RS09355;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO35_RS09355;old_locus_tag=CCO35_09350 NZ_NPME01000002.1 Protein Homology CDS 420714 421430 . - 0 ID=cds-WP_001194359.1;Parent=gene-CCO35_RS09355;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=CCO35_RS09355;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 421526 421666 . + . ID=gene-CCO35_RS09360;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=CCO35_RS09360;old_locus_tag=CCO35_09355 NZ_NPME01000002.1 Protein Homology CDS 421526 421666 . + 0 ID=cds-WP_001541509.1;Parent=gene-CCO35_RS09360;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=CCO35_RS09360;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 422066 422752 . + . ID=gene-CCO35_RS09365;Name=CCO35_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09365;old_locus_tag=CCO35_09360 NZ_NPME01000002.1 Protein Homology CDS 422066 422752 . + 0 ID=cds-WP_001266769.1;Parent=gene-CCO35_RS09365;Dbxref=GenBank:WP_001266769.1;Name=WP_001266769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=CCO35_RS09365;product=tRNA/rRNA methyltransferase;protein_id=WP_001266769.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 422966 423031 . + . ID=gene-CCO35_RS09370;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=CCO35_RS09370;old_locus_tag=CCO35_09365 NZ_NPME01000002.1 Protein Homology CDS 422966 423031 . + 0 ID=cds-WP_001575544.1;Parent=gene-CCO35_RS09370;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=CCO35_RS09370;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11 NZ_NPME01000002.1 cmsearch sequence_feature 422967 423087 . + . ID=id-NZ_NPME01000002.1:422967..423087;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPME01000002.1 RefSeq gene 423113 425575 . + . ID=gene-CCO35_RS09375;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=CCO35_RS09375;old_locus_tag=CCO35_09370 NZ_NPME01000002.1 Protein Homology CDS 423113 425575 . + 0 ID=cds-WP_001264680.1;Parent=gene-CCO35_RS09375;Dbxref=GenBank:WP_001264680.1;Name=WP_001264680.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=CCO35_RS09375;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264680.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 425577 426506 . + . ID=gene-CCO35_RS09380;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CCO35_RS09380;old_locus_tag=CCO35_09375 NZ_NPME01000002.1 Protein Homology CDS 425577 426506 . + 0 ID=cds-WP_000241685.1;Parent=gene-CCO35_RS09380;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=CCO35_RS09380;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 426510 427796 . + . ID=gene-CCO35_RS09385;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CCO35_RS09385;old_locus_tag=CCO35_09380 NZ_NPME01000002.1 Protein Homology CDS 426510 427796 . + 0 ID=cds-WP_000781105.1;Parent=gene-CCO35_RS09385;Dbxref=GenBank:WP_000781105.1;Name=WP_000781105.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=CCO35_RS09385;product=threonine synthase;protein_id=WP_000781105.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 427890 428663 . - . ID=gene-CCO35_RS09390;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=CCO35_RS09390;old_locus_tag=CCO35_09385 NZ_NPME01000002.1 Protein Homology CDS 427890 428663 . - 0 ID=cds-WP_000906172.1;Parent=gene-CCO35_RS09390;Dbxref=GenBank:WP_000906172.1;Name=WP_000906172.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=CCO35_RS09390;product=peroxide stress protein YaaA;protein_id=WP_000906172.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 428742 430172 . - . ID=gene-CCO35_RS09395;Name=CCO35_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09395;old_locus_tag=CCO35_09390 NZ_NPME01000002.1 Protein Homology CDS 428742 430172 . - 0 ID=cds-WP_001113801.1;Parent=gene-CCO35_RS09395;Dbxref=GenBank:WP_001113801.1;Name=WP_001113801.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=CCO35_RS09395;product=alanine/glycine:cation symporter family protein;protein_id=WP_001113801.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 430441 431394 . + . ID=gene-CCO35_RS09400;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO35_RS09400;old_locus_tag=CCO35_09395 NZ_NPME01000002.1 Protein Homology CDS 430441 431394 . + 0 ID=cds-WP_000130179.1;Parent=gene-CCO35_RS09400;Dbxref=GenBank:WP_000130179.1;Name=WP_000130179.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=CCO35_RS09400;product=transaldolase;protein_id=WP_000130179.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 431505 432095 . + . ID=gene-CCO35_RS09405;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=CCO35_RS09405;old_locus_tag=CCO35_09400 NZ_NPME01000002.1 Protein Homology CDS 431505 432095 . + 0 ID=cds-WP_000380373.1;Parent=gene-CCO35_RS09405;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=CCO35_RS09405;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 432152 432718 . - . ID=gene-CCO35_RS09410;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=CCO35_RS09410;old_locus_tag=CCO35_09405 NZ_NPME01000002.1 Protein Homology CDS 432152 432718 . - 0 ID=cds-WP_000528525.1;Parent=gene-CCO35_RS09410;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=CCO35_RS09410;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 432868 433581 . - . ID=gene-CCO35_RS09415;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=CCO35_RS09415;old_locus_tag=CCO35_09410 NZ_NPME01000002.1 Protein Homology CDS 432868 433581 . - 0 ID=cds-WP_001103472.1;Parent=gene-CCO35_RS09415;Dbxref=GenBank:WP_001103472.1;Name=WP_001103472.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=CCO35_RS09415;product=acidic protein MsyB;protein_id=WP_001103472.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 433617 434021 . - . ID=gene-CCO35_RS09420;Name=CCO35_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09420;old_locus_tag=CCO35_09415 NZ_NPME01000002.1 Protein Homology CDS 433617 434021 . - 0 ID=cds-WP_001258082.1;Parent=gene-CCO35_RS09420;Dbxref=GenBank:WP_001258082.1;Name=WP_001258082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=CCO35_RS09420;product=DUF2541 family protein;protein_id=WP_001258082.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 434370 436286 . + . ID=gene-CCO35_RS09425;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CCO35_RS09425;old_locus_tag=CCO35_09420 NZ_NPME01000002.1 Protein Homology CDS 434370 436286 . + 0 ID=cds-WP_000516126.1;Parent=gene-CCO35_RS09425;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=CCO35_RS09425;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 436372 437511 . + . ID=gene-CCO35_RS09430;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CCO35_RS09430;old_locus_tag=CCO35_09425 NZ_NPME01000002.1 Protein Homology CDS 436372 437511 . + 0 ID=cds-WP_001119009.1;Parent=gene-CCO35_RS09430;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=CCO35_RS09430;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 437792 438739 . + . ID=gene-CCO35_RS09435;Name=CCO35_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09435;old_locus_tag=CCO35_09430 NZ_NPME01000002.1 Protein Homology CDS 437792 438739 . + 0 ID=cds-WP_000534916.1;Parent=gene-CCO35_RS09435;Dbxref=GenBank:WP_000534916.1;Name=WP_000534916.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=CCO35_RS09435;product=LysR family transcriptional regulator;protein_id=WP_000534916.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 438866 439210 . + . ID=gene-CCO35_RS09440;Name=CCO35_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09440;old_locus_tag=CCO35_09435 NZ_NPME01000002.1 Protein Homology CDS 438866 439210 . + 0 ID=cds-WP_000026889.1;Parent=gene-CCO35_RS09440;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=CCO35_RS09440;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 439271 439804 . - . ID=gene-CCO35_RS09445;Name=CCO35_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09445;old_locus_tag=CCO35_09440 NZ_NPME01000002.1 Protein Homology CDS 439271 439804 . - 0 ID=cds-WP_001068134.1;Parent=gene-CCO35_RS09445;Dbxref=GenBank:WP_001068134.1;Name=WP_001068134.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=CCO35_RS09445;product=glycoside hydrolase family 108 protein;protein_id=WP_001068134.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 439821 440264 . - . ID=gene-CCO35_RS09450;Name=CCO35_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09450;old_locus_tag=CCO35_09445 NZ_NPME01000002.1 Protein Homology CDS 439821 440264 . - 0 ID=cds-WP_000860681.1;Parent=gene-CCO35_RS09450;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=CCO35_RS09450;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 440645 442744 . + . ID=gene-CCO35_RS09455;Name=CCO35_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09455;old_locus_tag=CCO35_09450 NZ_NPME01000002.1 Protein Homology CDS 440645 442744 . + 0 ID=cds-WP_000235809.1;Parent=gene-CCO35_RS09455;Dbxref=GenBank:WP_000235809.1;Name=WP_000235809.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=CCO35_RS09455;product=glycosyl hydrolase family 18 protein;protein_id=WP_000235809.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 442837 445833 . + . ID=gene-CCO35_RS09460;Name=CCO35_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09460;old_locus_tag=CCO35_09455 NZ_NPME01000002.1 Protein Homology CDS 442837 445833 . + 0 ID=cds-WP_031570575.1;Parent=gene-CCO35_RS09460;Dbxref=GenBank:WP_031570575.1;Name=WP_031570575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=CCO35_RS09460;product=hypothetical protein;protein_id=WP_031570575.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 446122 446817 . + . ID=gene-CCO35_RS09465;Name=CCO35_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09465;old_locus_tag=CCO35_09460 NZ_NPME01000002.1 Protein Homology CDS 446122 446817 . + 0 ID=cds-WP_000980522.1;Parent=gene-CCO35_RS09465;Dbxref=GenBank:WP_000980522.1;Name=WP_000980522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527260.1;locus_tag=CCO35_RS09465;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000980522.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 447248 447790 . + . ID=gene-CCO35_RS09470;Name=CCO35_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09470;old_locus_tag=CCO35_09465 NZ_NPME01000002.1 Protein Homology CDS 447248 447790 . + 0 ID=cds-WP_000743357.1;Parent=gene-CCO35_RS09470;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=CCO35_RS09470;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 447891 448577 . + . ID=gene-CCO35_RS09475;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=CCO35_RS09475;old_locus_tag=CCO35_09470 NZ_NPME01000002.1 Protein Homology CDS 447891 448577 . + 0 ID=cds-WP_000742551.1;Parent=gene-CCO35_RS09475;Dbxref=GenBank:WP_000742551.1;Name=WP_000742551.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=CCO35_RS09475;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000742551.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 448582 451203 . + . ID=gene-CCO35_RS09480;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=CCO35_RS09480;old_locus_tag=CCO35_09475 NZ_NPME01000002.1 Protein Homology CDS 448582 451203 . + 0 ID=cds-WP_001245840.1;Parent=gene-CCO35_RS09480;Dbxref=GenBank:WP_001245840.1;Name=WP_001245840.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=CCO35_RS09480;product=fimbrial usher BcfC;protein_id=WP_001245840.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 451204 452211 . + . ID=gene-CCO35_RS09485;Name=CCO35_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09485;old_locus_tag=CCO35_09480 NZ_NPME01000002.1 Protein Homology CDS 451204 452211 . + 0 ID=cds-WP_000701256.1;Parent=gene-CCO35_RS09485;Dbxref=GenBank:WP_000701256.1;Name=WP_000701256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=CCO35_RS09485;product=fimbrial protein BcfD;protein_id=WP_000701256.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 452212 452757 . + . ID=gene-CCO35_RS09490;Name=CCO35_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09490;old_locus_tag=CCO35_09485 NZ_NPME01000002.1 Protein Homology CDS 452212 452757 . + 0 ID=cds-WP_001082038.1;Parent=gene-CCO35_RS09490;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=CCO35_RS09490;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 452773 453291 . + . ID=gene-CCO35_RS09495;Name=CCO35_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09495;old_locus_tag=CCO35_09490 NZ_NPME01000002.1 Protein Homology CDS 452773 453291 . + 0 ID=cds-WP_001243228.1;Parent=gene-CCO35_RS09495;Dbxref=GenBank:WP_001243228.1;Name=WP_001243228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=CCO35_RS09495;product=fimbrial protein BcfF;protein_id=WP_001243228.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 453257 453988 . + . ID=gene-CCO35_RS09500;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=CCO35_RS09500;old_locus_tag=CCO35_09495 NZ_NPME01000002.1 Protein Homology CDS 453257 453988 . + 0 ID=cds-WP_001135030.1;Parent=gene-CCO35_RS09500;Dbxref=GenBank:WP_001135030.1;Name=WP_001135030.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=CCO35_RS09500;product=fimbrial chaperone BcfG;protein_id=WP_001135030.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 454053 454898 . + . ID=gene-CCO35_RS09505;Name=CCO35_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09505;old_locus_tag=CCO35_09500 NZ_NPME01000002.1 Protein Homology CDS 454053 454898 . + 0 ID=cds-WP_000291402.1;Parent=gene-CCO35_RS09505;Dbxref=GenBank:WP_000291402.1;Name=WP_000291402.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=CCO35_RS09505;product=DsbA family protein;protein_id=WP_000291402.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 454966 455250 . + . ID=gene-CCO35_RS09510;Name=CCO35_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09510;old_locus_tag=CCO35_09505 NZ_NPME01000002.1 Protein Homology CDS 454966 455250 . + 0 ID=cds-WP_000558466.1;Parent=gene-CCO35_RS09510;Dbxref=GenBank:WP_000558466.1;Name=WP_000558466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000558466.1;locus_tag=CCO35_RS09510;product=hypothetical protein;protein_id=WP_000558466.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 455372 455765 . - . ID=gene-CCO35_RS24330;Name=CCO35_RS24330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24330;old_locus_tag=CCO35_09510;pseudo=true NZ_NPME01000002.1 Protein Homology CDS 455372 455765 . - 0 ID=cds-CCO35_RS24330;Parent=gene-CCO35_RS24330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248824.1;locus_tag=CCO35_RS24330;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 456588 456767 . + . ID=gene-CCO35_RS09520;Name=CCO35_RS09520;end_range=456767,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS09520;old_locus_tag=CCO35_09515;partial=true;pseudo=true NZ_NPME01000002.1 Protein Homology CDS 456588 456767 . + 0 ID=cds-CCO35_RS09520;Parent=gene-CCO35_RS09520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=456767,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007726487.1;locus_tag=CCO35_RS09520;partial=true;product=arylsulfatase;pseudo=true;transl_table=11 NZ_NPME01000002.1 RefSeq gene 456975 457271 . - . ID=gene-CCO35_RS09525;Name=CCO35_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09525;old_locus_tag=CCO35_09520 NZ_NPME01000002.1 Protein Homology CDS 456975 457271 . - 0 ID=cds-WP_001542932.1;Parent=gene-CCO35_RS09525;Dbxref=GenBank:WP_001542932.1;Name=WP_001542932.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542932.1;locus_tag=CCO35_RS09525;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_001542932.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 457727 458491 . + . ID=gene-CCO35_RS09530;Name=CCO35_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09530;old_locus_tag=CCO35_09525 NZ_NPME01000002.1 Protein Homology CDS 457727 458491 . + 0 ID=cds-WP_000052612.1;Parent=gene-CCO35_RS09530;Dbxref=GenBank:WP_000052612.1;Name=WP_000052612.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052612.1;locus_tag=CCO35_RS09530;product=outer membrane protein OmpK;protein_id=WP_000052612.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 458512 460005 . + . ID=gene-CCO35_RS09535;Name=CCO35_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09535;old_locus_tag=CCO35_09530 NZ_NPME01000002.1 Protein Homology CDS 458512 460005 . + 0 ID=cds-WP_000754364.1;Parent=gene-CCO35_RS09535;Dbxref=GenBank:WP_000754364.1;Name=WP_000754364.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=CCO35_RS09535;product=sulfatase family protein;protein_id=WP_000754364.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 460109 461305 . + . ID=gene-CCO35_RS09540;Name=CCO35_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09540;old_locus_tag=CCO35_09535 NZ_NPME01000002.1 Protein Homology CDS 460109 461305 . + 0 ID=cds-WP_001189142.1;Parent=gene-CCO35_RS09540;Dbxref=GenBank:WP_001189142.1;Name=WP_001189142.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519625.1;locus_tag=CCO35_RS09540;product=anaerobic sulfatase maturase;protein_id=WP_001189142.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 461323 462576 . + . ID=gene-CCO35_RS09545;Name=CCO35_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09545;old_locus_tag=CCO35_09540 NZ_NPME01000002.1 Protein Homology CDS 461323 462576 . + 0 ID=cds-WP_000457886.1;Parent=gene-CCO35_RS09545;Dbxref=GenBank:WP_000457886.1;Name=WP_000457886.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457886.1;locus_tag=CCO35_RS09545;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_000457886.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 462695 462952 . + . ID=gene-CCO35_RS24335;Name=CCO35_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24335;old_locus_tag=CCO35_09545 NZ_NPME01000002.1 Protein Homology CDS 462695 462952 . + 0 ID=cds-WP_000528977.1;Parent=gene-CCO35_RS24335;Dbxref=GenBank:WP_000528977.1;Name=WP_000528977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528979.1;locus_tag=CCO35_RS24335;product=hypothetical protein;protein_id=WP_000528977.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 462874 463101 . + . ID=gene-CCO35_RS24340;Name=CCO35_RS24340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24340;old_locus_tag=CCO35_09550;partial=true;pseudo=true;start_range=.,462874 NZ_NPME01000002.1 Protein Homology CDS 462874 463101 . + 0 ID=cds-CCO35_RS24340;Parent=gene-CCO35_RS24340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=CCO35_RS24340;partial=true;product=aryl-sulfate sulfotransferase;pseudo=true;start_range=.,462874;transl_table=11 NZ_NPME01000002.1 RefSeq gene 463264 464430 . + . ID=gene-CCO35_RS09560;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=CCO35_RS09560;old_locus_tag=CCO35_09555 NZ_NPME01000002.1 Protein Homology CDS 463264 464430 . + 0 ID=cds-WP_000681340.1;Parent=gene-CCO35_RS09560;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=CCO35_RS09560;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 464492 465391 . + . ID=gene-CCO35_RS09565;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=CCO35_RS09565;old_locus_tag=CCO35_09560 NZ_NPME01000002.1 Protein Homology CDS 464492 465391 . + 0 ID=cds-WP_000062872.1;Parent=gene-CCO35_RS09565;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=CCO35_RS09565;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 465446 467485 . - . ID=gene-CCO35_RS09570;Name=CCO35_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09570;old_locus_tag=CCO35_09565 NZ_NPME01000002.1 Protein Homology CDS 465446 467485 . - 0 ID=cds-WP_001116449.1;Parent=gene-CCO35_RS09570;Dbxref=GenBank:WP_001116449.1;Name=WP_001116449.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=CCO35_RS09570;product=glycoside hydrolase family 31 protein;protein_id=WP_001116449.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 467525 468898 . - . ID=gene-CCO35_RS09575;Name=CCO35_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09575;old_locus_tag=CCO35_09570 NZ_NPME01000002.1 Protein Homology CDS 467525 468898 . - 0 ID=cds-WP_000099988.1;Parent=gene-CCO35_RS09575;Dbxref=GenBank:WP_000099988.1;Name=WP_000099988.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=CCO35_RS09575;product=MFS transporter;protein_id=WP_000099988.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 469359 469622 . - . ID=gene-CCO35_RS09580;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CCO35_RS09580;old_locus_tag=CCO35_09575 NZ_NPME01000002.1 Protein Homology CDS 469359 469622 . - 0 ID=cds-WP_001518655.1;Parent=gene-CCO35_RS09580;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=CCO35_RS09580;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 469728 469943 . + . ID=gene-CCO35_RS09585;Name=CCO35_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09585;old_locus_tag=CCO35_09580 NZ_NPME01000002.1 Protein Homology CDS 469728 469943 . + 0 ID=cds-WP_001538903.1;Parent=gene-CCO35_RS09585;Dbxref=GenBank:WP_001538903.1;Name=WP_001538903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=CCO35_RS09585;product=DUF2575 family protein;protein_id=WP_001538903.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 469951 470889 . + . ID=gene-CCO35_RS09590;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=CCO35_RS09590;old_locus_tag=CCO35_09585 NZ_NPME01000002.1 Protein Homology CDS 469951 470889 . + 0 ID=cds-WP_000767311.1;Parent=gene-CCO35_RS09590;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=CCO35_RS09590;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 470934 473768 . + . ID=gene-CCO35_RS09595;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CCO35_RS09595;old_locus_tag=CCO35_09590 NZ_NPME01000002.1 Protein Homology CDS 470934 473768 . + 0 ID=cds-WP_001563101.1;Parent=gene-CCO35_RS09595;Dbxref=GenBank:WP_001563101.1;Name=WP_001563101.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=CCO35_RS09595;product=isoleucine--tRNA ligase;protein_id=WP_001563101.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 473768 474268 . + . ID=gene-CCO35_RS09600;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CCO35_RS09600;old_locus_tag=CCO35_09595 NZ_NPME01000002.1 Protein Homology CDS 473768 474268 . + 0 ID=cds-WP_000042736.1;Parent=gene-CCO35_RS09600;Dbxref=GenBank:WP_000042736.1;Name=WP_000042736.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=CCO35_RS09600;product=signal peptidase II;protein_id=WP_000042736.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 474423 474872 . + . ID=gene-CCO35_RS09605;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=CCO35_RS09605;old_locus_tag=CCO35_09600 NZ_NPME01000002.1 Protein Homology CDS 474423 474872 . + 0 ID=cds-WP_000047269.1;Parent=gene-CCO35_RS09605;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=CCO35_RS09605;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 474875 475825 . + . ID=gene-CCO35_RS09610;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=CCO35_RS09610;old_locus_tag=CCO35_09605 NZ_NPME01000002.1 Protein Homology CDS 474875 475825 . + 0 ID=cds-WP_001166422.1;Parent=gene-CCO35_RS09610;Dbxref=GenBank:WP_001166422.1;Name=WP_001166422.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=CCO35_RS09610;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166422.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 476025 477227 . + . ID=gene-CCO35_RS09615;Name=CCO35_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09615;old_locus_tag=CCO35_09610 NZ_NPME01000002.1 Protein Homology CDS 476025 477227 . + 0 ID=cds-WP_000516311.1;Parent=gene-CCO35_RS09615;Dbxref=GenBank:WP_000516311.1;Name=WP_000516311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=CCO35_RS09615;product=XAC2610-related protein;protein_id=WP_000516311.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 477243 478163 . + . ID=gene-CCO35_RS09620;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CCO35_RS09620;old_locus_tag=CCO35_09615 NZ_NPME01000002.1 Protein Homology CDS 477243 478163 . + 0 ID=cds-WP_000741408.1;Parent=gene-CCO35_RS09620;Dbxref=GenBank:WP_000741408.1;Name=WP_000741408.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=CCO35_RS09620;product=ribonucleoside hydrolase RihC;protein_id=WP_000741408.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 478185 478871 . - . ID=gene-CCO35_RS09625;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=CCO35_RS09625;old_locus_tag=CCO35_09620 NZ_NPME01000002.1 Protein Homology CDS 478185 478871 . - 0 ID=cds-WP_000377415.1;Parent=gene-CCO35_RS09625;Dbxref=GenBank:WP_000377415.1;Name=WP_000377415.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=CCO35_RS09625;product=citrate response regulator transcription factor CitB;protein_id=WP_000377415.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 478873 480492 . - . ID=gene-CCO35_RS09630;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=CCO35_RS09630;old_locus_tag=CCO35_09625 NZ_NPME01000002.1 Protein Homology CDS 478873 480492 . - 0 ID=cds-WP_001563099.1;Parent=gene-CCO35_RS09630;Dbxref=GenBank:WP_001563099.1;Name=WP_001563099.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=CCO35_RS09630;product=citrate sensor histidine kinase CitA;protein_id=WP_001563099.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 480627 481928 . - . ID=gene-CCO35_RS09635;Name=CCO35_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09635;old_locus_tag=CCO35_09630 NZ_NPME01000002.1 Protein Homology CDS 480627 481928 . - 0 ID=cds-WP_000444883.1;Parent=gene-CCO35_RS09635;Dbxref=GenBank:WP_000444883.1;Name=WP_000444883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO35_RS09635;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444883.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 481941 483716 . - . ID=gene-CCO35_RS09640;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO35_RS09640;old_locus_tag=CCO35_09635 NZ_NPME01000002.1 Protein Homology CDS 481941 483716 . - 0 ID=cds-WP_000150495.1;Parent=gene-CCO35_RS09640;Dbxref=GenBank:WP_000150495.1;Name=WP_000150495.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO35_RS09640;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_000150495.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 483733 483972 . - . ID=gene-CCO35_RS09645;Name=CCO35_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09645;old_locus_tag=CCO35_09640 NZ_NPME01000002.1 Protein Homology CDS 483733 483972 . - 0 ID=cds-WP_001001154.1;Parent=gene-CCO35_RS09645;Dbxref=GenBank:WP_001001154.1;Name=WP_001001154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=CCO35_RS09645;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001001154.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 484131 485471 . - . ID=gene-CCO35_RS09650;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=CCO35_RS09650;old_locus_tag=CCO35_09645 NZ_NPME01000002.1 Protein Homology CDS 484131 485471 . - 0 ID=cds-WP_000183609.1;Parent=gene-CCO35_RS09650;Dbxref=GenBank:WP_000183609.1;Name=WP_000183609.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=CCO35_RS09650;product=citrate/sodium symporter CitS;protein_id=WP_000183609.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 485716 486759 . + . ID=gene-CCO35_RS09655;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO35_RS09655;old_locus_tag=CCO35_09650 NZ_NPME01000002.1 Protein Homology CDS 485716 486759 . + 0 ID=cds-WP_077916013.1;Parent=gene-CCO35_RS09655;Dbxref=GenBank:WP_077916013.1;Name=WP_077916013.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=CCO35_RS09655;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_077916013.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 486789 487082 . + . ID=gene-CCO35_RS09660;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO35_RS09660;old_locus_tag=CCO35_09655 NZ_NPME01000002.1 Protein Homology CDS 486789 487082 . + 0 ID=cds-WP_000691461.1;Parent=gene-CCO35_RS09660;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=CCO35_RS09660;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 487079 487948 . + . ID=gene-CCO35_RS09665;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO35_RS09665;old_locus_tag=CCO35_09660 NZ_NPME01000002.1 Protein Homology CDS 487079 487948 . + 0 ID=cds-WP_001247809.1;Parent=gene-CCO35_RS09665;Dbxref=GenBank:WP_001247809.1;Name=WP_001247809.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=CCO35_RS09665;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001247809.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 487959 489479 . + . ID=gene-CCO35_RS09670;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO35_RS09670;old_locus_tag=CCO35_09665 NZ_NPME01000002.1 Protein Homology CDS 487959 489479 . + 0 ID=cds-WP_000665582.1;Parent=gene-CCO35_RS09670;Dbxref=GenBank:WP_000665582.1;Name=WP_000665582.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=CCO35_RS09670;product=citrate lyase subunit alpha;protein_id=WP_000665582.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 489479 490030 . + . ID=gene-CCO35_RS09675;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO35_RS09675;old_locus_tag=CCO35_09670 NZ_NPME01000002.1 Protein Homology CDS 489479 490030 . + 0 ID=cds-WP_031568117.1;Parent=gene-CCO35_RS09675;Dbxref=GenBank:WP_031568117.1;Name=WP_031568117.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=CCO35_RS09675;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_031568117.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 490008 490916 . + . ID=gene-CCO35_RS09680;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO35_RS09680;old_locus_tag=CCO35_09675 NZ_NPME01000002.1 Protein Homology CDS 490008 490916 . + 0 ID=cds-WP_001103238.1;Parent=gene-CCO35_RS09680;Dbxref=GenBank:WP_001103238.1;Name=WP_001103238.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=CCO35_RS09680;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_001103238.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 491096 491917 . + . ID=gene-CCO35_RS09685;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CCO35_RS09685;old_locus_tag=CCO35_09680 NZ_NPME01000002.1 Protein Homology CDS 491096 491917 . + 0 ID=cds-WP_000544042.1;Parent=gene-CCO35_RS09685;Dbxref=GenBank:WP_000544042.1;Name=WP_000544042.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=CCO35_RS09685;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544042.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 492045 492209 . - . ID=gene-CCO35_RS23815;Name=CCO35_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23815 NZ_NPME01000002.1 GeneMarkS-2+ CDS 492045 492209 . - 0 ID=cds-WP_001610158.1;Parent=gene-CCO35_RS23815;Dbxref=GenBank:WP_001610158.1;Name=WP_001610158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS23815;product=hypothetical protein;protein_id=WP_001610158.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 492957 494105 . + . ID=gene-CCO35_RS09695;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=CCO35_RS09695;old_locus_tag=CCO35_09690 NZ_NPME01000002.1 Protein Homology CDS 492957 494105 . + 0 ID=cds-WP_000597270.1;Parent=gene-CCO35_RS09695;Dbxref=GenBank:WP_000597270.1;Name=WP_000597270.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=CCO35_RS09695;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597270.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 494124 497351 . + . ID=gene-CCO35_RS09700;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CCO35_RS09700;old_locus_tag=CCO35_09695 NZ_NPME01000002.1 Protein Homology CDS 494124 497351 . + 0 ID=cds-WP_001126315.1;Parent=gene-CCO35_RS09700;Dbxref=GenBank:WP_001126315.1;Name=WP_001126315.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=CCO35_RS09700;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126315.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 497625 498020 . + . ID=gene-CCO35_RS09705;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=CCO35_RS09705;old_locus_tag=CCO35_09700 NZ_NPME01000002.1 Protein Homology CDS 497625 498020 . + 0 ID=cds-WP_000333324.1;Parent=gene-CCO35_RS09705;Dbxref=GenBank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=CCO35_RS09705;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 498097 498693 . - . ID=gene-CCO35_RS09710;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=CCO35_RS09710;old_locus_tag=CCO35_09705 NZ_NPME01000002.1 Protein Homology CDS 498097 498693 . - 0 ID=cds-WP_000122863.1;Parent=gene-CCO35_RS09710;Dbxref=GenBank:WP_000122863.1;Name=WP_000122863.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=CCO35_RS09710;product=carnitine operon protein CaiE;protein_id=WP_000122863.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 498803 499588 . - . ID=gene-CCO35_RS09715;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=CCO35_RS09715;old_locus_tag=CCO35_09710 NZ_NPME01000002.1 Protein Homology CDS 498803 499588 . - 0 ID=cds-WP_000004378.1;Parent=gene-CCO35_RS09715;Dbxref=GenBank:WP_000004378.1;Name=WP_000004378.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO35_RS09715;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004378.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 499642 501195 . - . ID=gene-CCO35_RS09720;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=CCO35_RS09720;old_locus_tag=CCO35_09715 NZ_NPME01000002.1 Protein Homology CDS 499642 501195 . - 0 ID=cds-WP_000355804.1;Parent=gene-CCO35_RS09720;Dbxref=GenBank:WP_000355804.1;Name=WP_000355804.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=CCO35_RS09720;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_000355804.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 501258 502475 . - . ID=gene-CCO35_RS09725;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=CCO35_RS09725;old_locus_tag=CCO35_09720 NZ_NPME01000002.1 Protein Homology CDS 501258 502475 . - 0 ID=cds-WP_001016212.1;Parent=gene-CCO35_RS09725;Dbxref=GenBank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=CCO35_RS09725;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 502587 503729 . - . ID=gene-CCO35_RS09730;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=CCO35_RS09730;old_locus_tag=CCO35_09725 NZ_NPME01000002.1 Protein Homology CDS 502587 503729 . - 0 ID=cds-WP_000347134.1;Parent=gene-CCO35_RS09730;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=CCO35_RS09730;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 503764 505281 . - . ID=gene-CCO35_RS09735;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=CCO35_RS09735;old_locus_tag=CCO35_09730 NZ_NPME01000002.1 Protein Homology CDS 503764 505281 . - 0 ID=cds-WP_000787073.1;Parent=gene-CCO35_RS09735;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=CCO35_RS09735;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 505762 506532 . + . ID=gene-CCO35_RS09745;Name=CCO35_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09745;old_locus_tag=CCO35_09740 NZ_NPME01000002.1 Protein Homology CDS 505762 506532 . + 0 ID=cds-WP_000692185.1;Parent=gene-CCO35_RS09745;Dbxref=GenBank:WP_000692185.1;Name=WP_000692185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=CCO35_RS09745;product=electron transfer flavoprotein FixA;protein_id=WP_000692185.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 506548 507489 . + . ID=gene-CCO35_RS09750;Name=CCO35_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09750;old_locus_tag=CCO35_09745 NZ_NPME01000002.1 Protein Homology CDS 506548 507489 . + 0 ID=cds-WP_001032206.1;Parent=gene-CCO35_RS09750;Dbxref=GenBank:WP_001032206.1;Name=WP_001032206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=CCO35_RS09750;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032206.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 507539 508825 . + . ID=gene-CCO35_RS09755;Name=CCO35_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09755;old_locus_tag=CCO35_09750 NZ_NPME01000002.1 Protein Homology CDS 507539 508825 . + 0 ID=cds-WP_023251625.1;Parent=gene-CCO35_RS09755;Dbxref=GenBank:WP_023251625.1;Name=WP_023251625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=CCO35_RS09755;product=FAD-dependent oxidoreductase;protein_id=WP_023251625.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 508822 509109 . + . ID=gene-CCO35_RS09760;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=CCO35_RS09760;old_locus_tag=CCO35_09755 NZ_NPME01000002.1 Protein Homology CDS 508822 509109 . + 0 ID=cds-WP_000203736.1;Parent=gene-CCO35_RS09760;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=CCO35_RS09760;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 509257 510597 . + . ID=gene-CCO35_RS09765;Name=CCO35_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09765;old_locus_tag=CCO35_09760 NZ_NPME01000002.1 Protein Homology CDS 509257 510597 . + 0 ID=cds-WP_001136169.1;Parent=gene-CCO35_RS09765;Dbxref=GenBank:WP_001136169.1;Name=WP_001136169.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=CCO35_RS09765;product=MFS transporter;protein_id=WP_001136169.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 510686 510916 . + . ID=gene-CCO35_RS09770;Name=CCO35_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09770;old_locus_tag=CCO35_09765 NZ_NPME01000002.1 Protein Homology CDS 510686 510916 . + 0 ID=cds-WP_001172089.1;Parent=gene-CCO35_RS09770;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=CCO35_RS09770;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 511216 511632 . + . ID=gene-CCO35_RS09775;Name=CCO35_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09775;old_locus_tag=CCO35_09770 NZ_NPME01000002.1 Protein Homology CDS 511216 511632 . + 0 ID=cds-WP_000767274.1;Parent=gene-CCO35_RS09775;Dbxref=GenBank:WP_000767274.1;Name=WP_000767274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=CCO35_RS09775;product=hypothetical protein;protein_id=WP_000767274.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 511856 512146 . - . ID=gene-CCO35_RS09780;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=CCO35_RS09780;old_locus_tag=CCO35_09775 NZ_NPME01000002.1 Protein Homology CDS 511856 512146 . - 0 ID=cds-WP_000745957.1;Parent=gene-CCO35_RS09780;Dbxref=GenBank:WP_000745957.1;Name=WP_000745957.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=CCO35_RS09780;product=DUF1471 family virulence protein SrfN;protein_id=WP_000745957.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 513045 514934 . + . ID=gene-CCO35_RS09795;Name=CCO35_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09795;old_locus_tag=CCO35_09790 NZ_NPME01000002.1 Protein Homology CDS 513045 514934 . + 0 ID=cds-WP_000066315.1;Parent=gene-CCO35_RS09795;Dbxref=GenBank:WP_000066315.1;Name=WP_000066315.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=CCO35_RS09795;product=sulfatase-like hydrolase/transferase;protein_id=WP_000066315.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 515286 515366 . - . ID=gene-CCO35_RS24345;Name=CCO35_RS24345;end_range=515366,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24345;partial=true;pseudo=true NZ_NPME01000002.1 Protein Homology CDS 515286 515366 . - 0 ID=cds-CCO35_RS24345;Parent=gene-CCO35_RS24345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=515366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO35_RS24345;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000002.1 RefSeq gene 515487 516017 . + . ID=gene-CCO35_RS09805;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=CCO35_RS09805;old_locus_tag=CCO35_09800 NZ_NPME01000002.1 Protein Homology CDS 515487 516017 . + 0 ID=cds-WP_000600704.1;Parent=gene-CCO35_RS09805;Dbxref=GenBank:WP_000600704.1;Name=WP_000600704.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=CCO35_RS09805;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600704.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 516010 517872 . + . ID=gene-CCO35_RS09810;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=CCO35_RS09810;old_locus_tag=CCO35_09805 NZ_NPME01000002.1 Protein Homology CDS 516010 517872 . + 0 ID=cds-WP_000377171.1;Parent=gene-CCO35_RS09810;Dbxref=GenBank:WP_000377171.1;Name=WP_000377171.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=CCO35_RS09810;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377171.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 518071 518550 . + . ID=gene-CCO35_RS09815;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=CCO35_RS09815;old_locus_tag=CCO35_09810 NZ_NPME01000002.1 Protein Homology CDS 518071 518550 . + 0 ID=cds-WP_000624379.1;Parent=gene-CCO35_RS09815;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=CCO35_RS09815;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 518646 519494 . - . ID=gene-CCO35_RS09820;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=CCO35_RS09820;old_locus_tag=CCO35_09815 NZ_NPME01000002.1 Protein Homology CDS 518646 519494 . - 0 ID=cds-WP_000257211.1;Parent=gene-CCO35_RS09820;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=CCO35_RS09820;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 519505 519882 . - . ID=gene-CCO35_RS09825;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=CCO35_RS09825;old_locus_tag=CCO35_09820 NZ_NPME01000002.1 Protein Homology CDS 519505 519882 . - 0 ID=cds-WP_000610894.1;Parent=gene-CCO35_RS09825;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=CCO35_RS09825;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 519885 520706 . - . ID=gene-CCO35_RS09830;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CCO35_RS09830;old_locus_tag=CCO35_09825 NZ_NPME01000002.1 Protein Homology CDS 519885 520706 . - 0 ID=cds-WP_001065397.1;Parent=gene-CCO35_RS09830;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=CCO35_RS09830;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 520703 521692 . - . ID=gene-CCO35_RS09835;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=CCO35_RS09835;old_locus_tag=CCO35_09830 NZ_NPME01000002.1 Protein Homology CDS 520703 521692 . - 0 ID=cds-WP_000092999.1;Parent=gene-CCO35_RS09835;Dbxref=GenBank:WP_000092999.1;Name=WP_000092999.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=CCO35_RS09835;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000092999.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 521692 522978 . - . ID=gene-CCO35_RS09840;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=CCO35_RS09840;old_locus_tag=CCO35_09835 NZ_NPME01000002.1 Protein Homology CDS 521692 522978 . - 0 ID=cds-WP_000800482.1;Parent=gene-CCO35_RS09840;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=CCO35_RS09840;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 523032 525386 . - . ID=gene-CCO35_RS09845;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=CCO35_RS09845;old_locus_tag=CCO35_09840 NZ_NPME01000002.1 Protein Homology CDS 523032 525386 . - 0 ID=cds-WP_000746125.1;Parent=gene-CCO35_RS09845;Dbxref=GenBank:WP_000746125.1;Name=WP_000746125.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=CCO35_RS09845;product=LPS assembly protein LptD;protein_id=WP_000746125.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 525640 526452 . + . ID=gene-CCO35_RS09850;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=CCO35_RS09850;old_locus_tag=CCO35_09845 NZ_NPME01000002.1 Protein Homology CDS 525640 526452 . + 0 ID=cds-WP_001200595.1;Parent=gene-CCO35_RS09850;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=CCO35_RS09850;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 526547 527206 . - . ID=gene-CCO35_RS09855;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=CCO35_RS09855;old_locus_tag=CCO35_09850 NZ_NPME01000002.1 Protein Homology CDS 526547 527206 . - 0 ID=cds-WP_000525196.1;Parent=gene-CCO35_RS09855;Dbxref=GenBank:WP_000525196.1;Name=WP_000525196.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=CCO35_RS09855;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525196.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 527218 530124 . - . ID=gene-CCO35_RS09860;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=CCO35_RS09860;old_locus_tag=CCO35_09855 NZ_NPME01000002.1 Protein Homology CDS 527218 530124 . - 0 ID=cds-WP_001116966.1;Parent=gene-CCO35_RS09860;Dbxref=GenBank:WP_001116966.1;Name=WP_001116966.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=CCO35_RS09860;product=RNA polymerase-associated protein RapA;protein_id=WP_001116966.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 530298 532649 . - . ID=gene-CCO35_RS09865;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=CCO35_RS09865;old_locus_tag=CCO35_09860 NZ_NPME01000002.1 Protein Homology CDS 530298 532649 . - 0 ID=cds-WP_031568121.1;Parent=gene-CCO35_RS09865;Dbxref=GenBank:WP_031568121.1;Name=WP_031568121.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=CCO35_RS09865;product=DNA polymerase II;protein_id=WP_031568121.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 532693 533313 . - . ID=gene-CCO35_RS09870;Name=CCO35_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09870;old_locus_tag=CCO35_09865 NZ_NPME01000002.1 Protein Homology CDS 532693 533313 . - 0 ID=cds-WP_000877518.1;Parent=gene-CCO35_RS09870;Dbxref=GenBank:WP_000877518.1;Name=WP_000877518.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=CCO35_RS09870;product=YdcF family protein;protein_id=WP_000877518.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 533831 534250 . + . ID=gene-CCO35_RS09880;Name=CCO35_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09880;old_locus_tag=CCO35_09875 NZ_NPME01000002.1 Protein Homology CDS 533831 534250 . + 0 ID=cds-WP_001102192.1;Parent=gene-CCO35_RS09880;Dbxref=GenBank:WP_001102192.1;Name=WP_001102192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=CCO35_RS09880;product=DUF4751 family protein;protein_id=WP_001102192.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 534256 534951 . - . ID=gene-CCO35_RS09885;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO35_RS09885;old_locus_tag=CCO35_09880 NZ_NPME01000002.1 Protein Homology CDS 534256 534951 . - 0 ID=cds-WP_000888685.1;Parent=gene-CCO35_RS09885;Dbxref=GenBank:WP_000888685.1;Name=WP_000888685.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=CCO35_RS09885;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888685.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 535092 536594 . - . ID=gene-CCO35_RS09890;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=CCO35_RS09890;old_locus_tag=CCO35_09885 NZ_NPME01000002.1 Protein Homology CDS 535092 536594 . - 0 ID=cds-WP_023212446.1;Parent=gene-CCO35_RS09890;Dbxref=GenBank:WP_023212446.1;Name=WP_023212446.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=CCO35_RS09890;product=L-arabinose isomerase;protein_id=WP_023212446.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 536605 538314 . - . ID=gene-CCO35_RS09895;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=CCO35_RS09895;old_locus_tag=CCO35_09890 NZ_NPME01000002.1 Protein Homology CDS 536605 538314 . - 0 ID=cds-WP_031568125.1;Parent=gene-CCO35_RS09895;Dbxref=GenBank:WP_031568125.1;Name=WP_031568125.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=CCO35_RS09895;product=ribulokinase;protein_id=WP_031568125.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 538655 539500 . + . ID=gene-CCO35_RS09900;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=CCO35_RS09900;old_locus_tag=CCO35_09895 NZ_NPME01000002.1 Protein Homology CDS 538655 539500 . + 0 ID=cds-WP_000852387.1;Parent=gene-CCO35_RS09900;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=CCO35_RS09900;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 539619 540386 . + . ID=gene-CCO35_RS09905;Name=CCO35_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS09905;old_locus_tag=CCO35_09900 NZ_NPME01000002.1 Protein Homology CDS 539619 540386 . + 0 ID=cds-WP_001148369.1;Parent=gene-CCO35_RS09905;Dbxref=GenBank:WP_001148369.1;Name=WP_001148369.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=CCO35_RS09905;product=DedA family protein;protein_id=WP_001148369.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 540425 541132 . - . ID=gene-CCO35_RS09910;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=CCO35_RS09910;old_locus_tag=CCO35_09905 NZ_NPME01000002.1 Protein Homology CDS 540425 541132 . - 0 ID=cds-WP_000915973.1;Parent=gene-CCO35_RS09910;Dbxref=GenBank:WP_000915973.1;Name=WP_000915973.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=CCO35_RS09910;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000915973.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 541116 542726 . - . ID=gene-CCO35_RS09915;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=CCO35_RS09915;old_locus_tag=CCO35_09910 NZ_NPME01000002.1 Protein Homology CDS 541116 542726 . - 0 ID=cds-WP_000235637.1;Parent=gene-CCO35_RS09915;Dbxref=GenBank:WP_000235637.1;Name=WP_000235637.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=CCO35_RS09915;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235637.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 542702 543685 . - . ID=gene-CCO35_RS09920;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=CCO35_RS09920;old_locus_tag=CCO35_09915 NZ_NPME01000002.1 Protein Homology CDS 542702 543685 . - 0 ID=cds-WP_000915326.1;Parent=gene-CCO35_RS09920;Dbxref=GenBank:WP_000915326.1;Name=WP_000915326.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=CCO35_RS09920;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915326.1;transl_table=11 NZ_NPME01000002.1 cmsearch riboswitch 543717 543816 . - . ID=id-NZ_NPME01000002.1:543717..543816;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPME01000002.1 RefSeq gene 543864 545522 . - . ID=gene-CCO35_RS09925;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=CCO35_RS09925;old_locus_tag=CCO35_09920 NZ_NPME01000002.1 Protein Homology CDS 543864 545522 . - 0 ID=cds-WP_023137255.1;Parent=gene-CCO35_RS09925;Dbxref=GenBank:WP_023137255.1;Name=WP_023137255.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=CCO35_RS09925;product=HTH-type transcriptional regulator SgrR;protein_id=WP_023137255.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 545615 545737 . + . ID=gene-CCO35_RS09930;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=CCO35_RS09930;old_locus_tag=CCO35_09925 NZ_NPME01000002.1 Protein Homology CDS 545615 545737 . + 0 ID=cds-WP_000553886.1;Parent=gene-CCO35_RS09930;Dbxref=GenBank:WP_000553886.1;Name=WP_000553886.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=CCO35_RS09930;product=glucose uptake inhibitor SgrT;protein_id=WP_000553886.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 546023 546628 . - . ID=gene-CCO35_RS09935;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CCO35_RS09935;old_locus_tag=CCO35_09930 NZ_NPME01000002.1 Protein Homology CDS 546023 546628 . - 0 ID=cds-WP_000818267.1;Parent=gene-CCO35_RS09935;Dbxref=GenBank:WP_000818267.1;Name=WP_000818267.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=CCO35_RS09935;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818267.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 546639 548039 . - . ID=gene-CCO35_RS09940;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CCO35_RS09940;old_locus_tag=CCO35_09935 NZ_NPME01000002.1 Protein Homology CDS 546639 548039 . - 0 ID=cds-WP_001140632.1;Parent=gene-CCO35_RS09940;Dbxref=GenBank:WP_001140632.1;Name=WP_001140632.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=CCO35_RS09940;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140632.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 548042 549133 . - . ID=gene-CCO35_RS09945;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CCO35_RS09945;old_locus_tag=CCO35_09940 NZ_NPME01000002.1 Protein Homology CDS 548042 549133 . - 0 ID=cds-WP_000042325.1;Parent=gene-CCO35_RS09945;Dbxref=GenBank:WP_000042325.1;Name=WP_000042325.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=CCO35_RS09945;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042325.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 549133 550704 . - . ID=gene-CCO35_RS09950;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=CCO35_RS09950;old_locus_tag=CCO35_09945 NZ_NPME01000002.1 Protein Homology CDS 549133 550704 . - 0 ID=cds-WP_000082819.1;Parent=gene-CCO35_RS09950;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=CCO35_RS09950;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 550792 550878 . - . ID=gene-CCO35_RS09955;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=CCO35_RS09955;old_locus_tag=CCO35_09950 NZ_NPME01000002.1 Protein Homology CDS 550792 550878 . - 0 ID=cds-WP_001575587.1;Parent=gene-CCO35_RS09955;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=CCO35_RS09955;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 551535 552479 . + . ID=gene-CCO35_RS09960;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=CCO35_RS09960;old_locus_tag=CCO35_09955 NZ_NPME01000002.1 Protein Homology CDS 551535 552479 . + 0 ID=cds-WP_094965338.1;Parent=gene-CCO35_RS09960;Dbxref=GenBank:WP_094965338.1;Name=WP_094965338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=CCO35_RS09960;product=transcriptional regulator LeuO;protein_id=WP_094965338.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 552801 554525 . + . ID=gene-CCO35_RS09965;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=CCO35_RS09965;old_locus_tag=CCO35_09960 NZ_NPME01000002.1 Protein Homology CDS 552801 554525 . + 0 ID=cds-WP_000425624.1;Parent=gene-CCO35_RS09965;Dbxref=GenBank:WP_000425624.1;Name=WP_000425624.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=CCO35_RS09965;product=acetolactate synthase 3 large subunit;protein_id=WP_000425624.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 554528 555019 . + . ID=gene-CCO35_RS09970;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO35_RS09970;old_locus_tag=CCO35_09965 NZ_NPME01000002.1 Protein Homology CDS 554528 555019 . + 0 ID=cds-WP_001563086.1;Parent=gene-CCO35_RS09970;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=CCO35_RS09970;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 555303 556307 . + . ID=gene-CCO35_RS09975;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=CCO35_RS09975;old_locus_tag=CCO35_09970 NZ_NPME01000002.1 Protein Homology CDS 555303 556307 . + 0 ID=cds-WP_000762406.1;Parent=gene-CCO35_RS09975;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=CCO35_RS09975;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 556913 557371 . + . ID=gene-CCO35_RS09980;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CCO35_RS09980;old_locus_tag=CCO35_09975 NZ_NPME01000002.1 Protein Homology CDS 556913 557371 . + 0 ID=cds-WP_000488294.1;Parent=gene-CCO35_RS09980;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=CCO35_RS09980;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 557373 558314 . + . ID=gene-CCO35_RS09985;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CCO35_RS09985;old_locus_tag=CCO35_09980 NZ_NPME01000002.1 Protein Homology CDS 557373 558314 . + 0 ID=cds-WP_000970444.1;Parent=gene-CCO35_RS09985;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=CCO35_RS09985;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 558311 558676 . + . ID=gene-CCO35_RS09990;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CCO35_RS09990;old_locus_tag=CCO35_09985 NZ_NPME01000002.1 Protein Homology CDS 558311 558676 . + 0 ID=cds-WP_000625651.1;Parent=gene-CCO35_RS09990;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=CCO35_RS09990;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 558692 560458 . + . ID=gene-CCO35_RS09995;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO35_RS09995;old_locus_tag=CCO35_09990 NZ_NPME01000002.1 Protein Homology CDS 558692 560458 . + 0 ID=cds-WP_000642235.1;Parent=gene-CCO35_RS09995;Dbxref=GenBank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=CCO35_RS09995;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 560445 561932 . + . ID=gene-CCO35_RS10000;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=CCO35_RS10000;old_locus_tag=CCO35_09995 NZ_NPME01000002.1 Protein Homology CDS 560445 561932 . + 0 ID=cds-WP_000775073.1;Parent=gene-CCO35_RS10000;Dbxref=GenBank:WP_000775073.1;Name=WP_000775073.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=CCO35_RS10000;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_000775073.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 561929 563287 . + . ID=gene-CCO35_RS10005;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=CCO35_RS10005;old_locus_tag=CCO35_10000 NZ_NPME01000002.1 Protein Homology CDS 561929 563287 . + 0 ID=cds-WP_094965339.1;Parent=gene-CCO35_RS10005;Dbxref=GenBank:WP_094965339.1;Name=WP_094965339.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=CCO35_RS10005;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_094965339.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 563281 564363 . + . ID=gene-CCO35_RS10010;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CCO35_RS10010;old_locus_tag=CCO35_10005 NZ_NPME01000002.1 Protein Homology CDS 563281 564363 . + 0 ID=cds-WP_000964138.1;Parent=gene-CCO35_RS10010;Dbxref=GenBank:WP_000964138.1;Name=WP_000964138.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=CCO35_RS10010;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 564366 565682 . + . ID=gene-CCO35_RS10015;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CCO35_RS10015;old_locus_tag=CCO35_10010 NZ_NPME01000002.1 Protein Homology CDS 564366 565682 . + 0 ID=cds-WP_000796443.1;Parent=gene-CCO35_RS10015;Dbxref=GenBank:WP_000796443.1;Name=WP_000796443.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=CCO35_RS10015;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796443.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 565682 566926 . + . ID=gene-CCO35_RS10020;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CCO35_RS10020;old_locus_tag=CCO35_10015 NZ_NPME01000002.1 Protein Homology CDS 565682 566926 . + 0 ID=cds-WP_001239803.1;Parent=gene-CCO35_RS10020;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=CCO35_RS10020;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 566923 567990 . + . ID=gene-CCO35_RS10025;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CCO35_RS10025;old_locus_tag=CCO35_10020 NZ_NPME01000002.1 Protein Homology CDS 566923 567990 . + 0 ID=cds-WP_000016613.1;Parent=gene-CCO35_RS10025;Dbxref=GenBank:WP_000016613.1;Name=WP_000016613.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=CCO35_RS10025;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016613.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 568109 569584 . + . ID=gene-CCO35_RS10030;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CCO35_RS10030;old_locus_tag=CCO35_10025 NZ_NPME01000002.1 Protein Homology CDS 568109 569584 . + 0 ID=cds-WP_023213698.1;Parent=gene-CCO35_RS10030;Dbxref=GenBank:WP_023213698.1;Name=WP_023213698.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=CCO35_RS10030;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_023213698.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 569577 570497 . + . ID=gene-CCO35_RS10035;Name=CCO35_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10035;old_locus_tag=CCO35_10030 NZ_NPME01000002.1 Protein Homology CDS 569577 570497 . + 0 ID=cds-WP_000763897.1;Parent=gene-CCO35_RS10035;Dbxref=GenBank:WP_000763897.1;Name=WP_000763897.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=CCO35_RS10035;product=D-alanine--D-alanine ligase;protein_id=WP_000763897.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 570499 571329 . + . ID=gene-CCO35_RS10040;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=CCO35_RS10040;old_locus_tag=CCO35_10035 NZ_NPME01000002.1 Protein Homology CDS 570499 571329 . + 0 ID=cds-WP_000075728.1;Parent=gene-CCO35_RS10040;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=CCO35_RS10040;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 571326 572588 . + . ID=gene-CCO35_RS10045;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CCO35_RS10045;old_locus_tag=CCO35_10040 NZ_NPME01000002.1 Protein Homology CDS 571326 572588 . + 0 ID=cds-WP_000588463.1;Parent=gene-CCO35_RS10045;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=CCO35_RS10045;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 572650 573801 . + . ID=gene-CCO35_RS10050;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CCO35_RS10050;old_locus_tag=CCO35_10045 NZ_NPME01000002.1 Protein Homology CDS 572650 573801 . + 0 ID=cds-WP_000462785.1;Parent=gene-CCO35_RS10050;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=CCO35_RS10050;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 573902 574819 . + . ID=gene-CCO35_RS10055;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=CCO35_RS10055;old_locus_tag=CCO35_10050 NZ_NPME01000002.1 Protein Homology CDS 573902 574819 . + 0 ID=cds-WP_000595487.1;Parent=gene-CCO35_RS10055;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=CCO35_RS10055;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 575098 575595 . + . ID=gene-CCO35_RS10060;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=CCO35_RS10060;old_locus_tag=CCO35_10055 NZ_NPME01000002.1 Protein Homology CDS 575098 575595 . + 0 ID=cds-WP_023137252.1;Parent=gene-CCO35_RS10060;Dbxref=GenBank:WP_023137252.1;Name=WP_023137252.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014335.1;locus_tag=CCO35_RS10060;product=secA translation cis-regulator SecM;protein_id=WP_023137252.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 575657 578362 . + . ID=gene-CCO35_RS10065;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CCO35_RS10065;old_locus_tag=CCO35_10060 NZ_NPME01000002.1 Protein Homology CDS 575657 578362 . + 0 ID=cds-WP_000905755.1;Parent=gene-CCO35_RS10065;Dbxref=GenBank:WP_000905755.1;Name=WP_000905755.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=CCO35_RS10065;product=preprotein translocase subunit SecA;protein_id=WP_000905755.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 578514 578909 . + . ID=gene-CCO35_RS10070;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=CCO35_RS10070;old_locus_tag=CCO35_10065 NZ_NPME01000002.1 Protein Homology CDS 578514 578909 . + 0 ID=cds-WP_000826474.1;Parent=gene-CCO35_RS10070;Dbxref=GenBank:WP_000826474.1;Name=WP_000826474.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=CCO35_RS10070;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000826474.1;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 578943 579083 . - . ID=gene-CCO35_RS24035;Name=CCO35_RS24035;end_range=579083,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24035;old_locus_tag=CCO35_10070;partial=true;pseudo=true NZ_NPME01000002.1 Protein Homology CDS 578943 579083 . - 0 ID=cds-CCO35_RS24035;Parent=gene-CCO35_RS24035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=579083,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=CCO35_RS24035;partial=true;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_NPME01000002.1 RefSeq pseudogene 579119 579226 . + . ID=gene-CCO35_RS23640;Name=CCO35_RS23640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23640;partial=true;pseudo=true;start_range=.,579119 NZ_NPME01000002.1 Protein Homology CDS 579119 579226 . + 0 ID=cds-CCO35_RS23640;Parent=gene-CCO35_RS23640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=CCO35_RS23640;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,579119;transl_table=11 NZ_NPME01000002.1 RefSeq gene 579223 579414 . - . ID=gene-CCO35_RS10085;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=CCO35_RS10085;old_locus_tag=CCO35_10080 NZ_NPME01000002.1 Protein Homology CDS 579223 579414 . - 0 ID=cds-WP_001286419.1;Parent=gene-CCO35_RS10085;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=CCO35_RS10085;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 579424 580167 . - . ID=gene-CCO35_RS10090;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=CCO35_RS10090;old_locus_tag=CCO35_10085 NZ_NPME01000002.1 Protein Homology CDS 579424 580167 . - 0 ID=cds-WP_000557441.1;Parent=gene-CCO35_RS10090;Dbxref=GenBank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=CCO35_RS10090;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 580167 580787 . - . ID=gene-CCO35_RS10095;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CCO35_RS10095;old_locus_tag=CCO35_10090 NZ_NPME01000002.1 Protein Homology CDS 580167 580787 . - 0 ID=cds-WP_001270920.1;Parent=gene-CCO35_RS10095;Dbxref=GenBank:WP_001270920.1;Name=WP_001270920.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=CCO35_RS10095;product=dephospho-CoA kinase;protein_id=WP_001270920.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 581013 582056 . + . ID=gene-CCO35_RS10100;Name=CCO35_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10100;old_locus_tag=CCO35_10095 NZ_NPME01000002.1 Protein Homology CDS 581013 582056 . + 0 ID=cds-WP_001217363.1;Parent=gene-CCO35_RS10100;Dbxref=GenBank:WP_001217363.1;Name=WP_001217363.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=CCO35_RS10100;product=GMP reductase;protein_id=WP_001217363.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 582087 583289 . - . ID=gene-CCO35_RS10105;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=CCO35_RS10105;old_locus_tag=CCO35_10100 NZ_NPME01000002.1 Protein Homology CDS 582087 583289 . - 0 ID=cds-WP_000114112.1;Parent=gene-CCO35_RS10105;Dbxref=GenBank:WP_000114112.1;Name=WP_000114112.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=CCO35_RS10105;product=protein transport protein HofC;protein_id=WP_000114112.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 583279 584664 . - . ID=gene-CCO35_RS10110;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=CCO35_RS10110;old_locus_tag=CCO35_10105 NZ_NPME01000002.1 Protein Homology CDS 583279 584664 . - 0 ID=cds-WP_031568150.1;Parent=gene-CCO35_RS10110;Dbxref=GenBank:WP_031568150.1;Name=WP_031568150.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=CCO35_RS10110;product=type II secretion system protein GspE;protein_id=WP_031568150.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 584674 585111 . - . ID=gene-CCO35_RS10115;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=CCO35_RS10115;old_locus_tag=CCO35_10110 NZ_NPME01000002.1 Protein Homology CDS 584674 585111 . - 0 ID=cds-WP_000414988.1;Parent=gene-CCO35_RS10115;Dbxref=GenBank:WP_000414988.1;Name=WP_000414988.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=CCO35_RS10115;product=prepilin peptidase-dependent pilin;protein_id=WP_000414988.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 585333 586226 . - . ID=gene-CCO35_RS10125;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=CCO35_RS10125;old_locus_tag=CCO35_10120 NZ_NPME01000002.1 Protein Homology CDS 585333 586226 . - 0 ID=cds-WP_023137247.1;Parent=gene-CCO35_RS10125;Dbxref=GenBank:WP_023137247.1;Name=WP_023137247.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=CCO35_RS10125;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_023137247.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 586314 586877 . + . ID=gene-CCO35_RS10130;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=CCO35_RS10130;old_locus_tag=CCO35_10125 NZ_NPME01000002.1 Protein Homology CDS 586314 586877 . + 0 ID=cds-WP_000936326.1;Parent=gene-CCO35_RS10130;Dbxref=GenBank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=CCO35_RS10130;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 586874 587728 . + . ID=gene-CCO35_RS10135;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=CCO35_RS10135;old_locus_tag=CCO35_10130 NZ_NPME01000002.1 Protein Homology CDS 586874 587728 . + 0 ID=cds-WP_000172042.1;Parent=gene-CCO35_RS10135;Dbxref=GenBank:WP_000172042.1;Name=WP_000172042.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=CCO35_RS10135;product=beta-lactamase regulator AmpE;protein_id=WP_000172042.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 587820 588770 . - . ID=gene-CCO35_RS10140;Name=CCO35_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10140;old_locus_tag=CCO35_10135 NZ_NPME01000002.1 Protein Homology CDS 587820 588770 . - 0 ID=cds-WP_000024771.1;Parent=gene-CCO35_RS10140;Dbxref=GenBank:WP_000024771.1;Name=WP_000024771.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=CCO35_RS10140;product=glycoside hydrolase family 43 protein;protein_id=WP_000024771.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 588770 590176 . - . ID=gene-CCO35_RS10145;Name=CCO35_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10145;old_locus_tag=CCO35_10140 NZ_NPME01000002.1 Protein Homology CDS 588770 590176 . - 0 ID=cds-WP_023137246.1;Parent=gene-CCO35_RS10145;Dbxref=GenBank:WP_023137246.1;Name=WP_023137246.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=CCO35_RS10145;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_023137246.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 590340 591713 . - . ID=gene-CCO35_RS10150;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=CCO35_RS10150;old_locus_tag=CCO35_10145 NZ_NPME01000002.1 Protein Homology CDS 590340 591713 . - 0 ID=cds-WP_001539002.1;Parent=gene-CCO35_RS10150;Dbxref=GenBank:WP_001539002.1;Name=WP_001539002.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=CCO35_RS10150;product=aromatic amino acid transporter AroP;protein_id=WP_001539002.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 592276 593040 . + . ID=gene-CCO35_RS10155;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=CCO35_RS10155;old_locus_tag=CCO35_10150 NZ_NPME01000002.1 Protein Homology CDS 592276 593040 . + 0 ID=cds-WP_000331771.1;Parent=gene-CCO35_RS10155;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=CCO35_RS10155;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 593347 596010 . + . ID=gene-CCO35_RS10165;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=CCO35_RS10165;old_locus_tag=CCO35_10160 NZ_NPME01000002.1 Protein Homology CDS 593347 596010 . + 0 ID=cds-WP_031568157.1;Parent=gene-CCO35_RS10165;Dbxref=GenBank:WP_031568157.1;Name=WP_031568157.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=CCO35_RS10165;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_031568157.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 596025 597914 . + . ID=gene-CCO35_RS10170;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=CCO35_RS10170;old_locus_tag=CCO35_10165 NZ_NPME01000002.1 Protein Homology CDS 596025 597914 . + 0 ID=cds-WP_023207545.1;Parent=gene-CCO35_RS10170;Dbxref=GenBank:WP_023207545.1;Name=WP_023207545.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=CCO35_RS10170;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_023207545.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 598116 599540 . + . ID=gene-CCO35_RS10175;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CCO35_RS10175;old_locus_tag=CCO35_10170 NZ_NPME01000002.1 Protein Homology CDS 598116 599540 . + 0 ID=cds-WP_001529952.1;Parent=gene-CCO35_RS10175;Dbxref=GenBank:WP_001529952.1;Name=WP_001529952.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=CCO35_RS10175;product=dihydrolipoyl dehydrogenase;protein_id=WP_001529952.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 599829 600113 . + . ID=gene-CCO35_RS10180;Name=CCO35_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10180;old_locus_tag=CCO35_10175 NZ_NPME01000002.1 Protein Homology CDS 599829 600113 . + 0 ID=cds-WP_000765363.1;Parent=gene-CCO35_RS10180;Dbxref=GenBank:WP_000765363.1;Name=WP_000765363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=CCO35_RS10180;product=outer membrane protein;protein_id=WP_000765363.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 600151 600942 . - . ID=gene-CCO35_RS10185;Name=CCO35_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10185;old_locus_tag=CCO35_10180 NZ_NPME01000002.1 Protein Homology CDS 600151 600942 . - 0 ID=cds-WP_000757448.1;Parent=gene-CCO35_RS10185;Dbxref=GenBank:WP_000757448.1;Name=WP_000757448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=CCO35_RS10185;product=DUF2950 family protein;protein_id=WP_000757448.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 600955 602550 . - . ID=gene-CCO35_RS10190;Name=CCO35_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10190;old_locus_tag=CCO35_10185 NZ_NPME01000002.1 Protein Homology CDS 600955 602550 . - 0 ID=cds-WP_031568162.1;Parent=gene-CCO35_RS10190;Dbxref=GenBank:WP_031568162.1;Name=WP_031568162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=CCO35_RS10190;product=DUF3300 domain-containing protein;protein_id=WP_031568162.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 602939 605536 . + . ID=gene-CCO35_RS10195;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=CCO35_RS10195;old_locus_tag=CCO35_10190 NZ_NPME01000002.1 Protein Homology CDS 602939 605536 . + 0 ID=cds-WP_000888949.1;Parent=gene-CCO35_RS10195;Dbxref=GenBank:WP_000888949.1;Name=WP_000888949.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=CCO35_RS10195;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_000888949.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 605725 606087 . + . ID=gene-CCO35_RS10200;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=CCO35_RS10200;old_locus_tag=CCO35_10195 NZ_NPME01000002.1 Protein Homology CDS 605725 606087 . + 0 ID=cds-WP_000384308.1;Parent=gene-CCO35_RS10200;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=CCO35_RS10200;product=protein YacL;protein_id=WP_000384308.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 606321 607274 . + . ID=gene-CCO35_RS10205;Name=CCO35_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10205;old_locus_tag=CCO35_10200 NZ_NPME01000002.1 Protein Homology CDS 606321 607274 . + 0 ID=cds-WP_001022089.1;Parent=gene-CCO35_RS10205;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=CCO35_RS10205;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 607271 608542 . + . ID=gene-CCO35_RS10210;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=CCO35_RS10210;old_locus_tag=CCO35_10205 NZ_NPME01000002.1 Protein Homology CDS 607271 608542 . + 0 ID=cds-WP_000782192.1;Parent=gene-CCO35_RS10210;Dbxref=GenBank:WP_000782192.1;Name=WP_000782192.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=CCO35_RS10210;product=D-threonate kinase;protein_id=WP_000782192.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 608532 609515 . + . ID=gene-CCO35_RS10215;Name=CCO35_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10215;old_locus_tag=CCO35_10210 NZ_NPME01000002.1 Protein Homology CDS 608532 609515 . + 0 ID=cds-WP_000448745.1;Parent=gene-CCO35_RS10215;Dbxref=GenBank:WP_000448745.1;Name=WP_000448745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=CCO35_RS10215;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448745.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 609525 610292 . + . ID=gene-CCO35_RS10220;Name=CCO35_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10220;old_locus_tag=CCO35_10215 NZ_NPME01000002.1 Protein Homology CDS 609525 610292 . + 0 ID=cds-WP_000678255.1;Parent=gene-CCO35_RS10220;Dbxref=GenBank:WP_000678255.1;Name=WP_000678255.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=CCO35_RS10220;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678255.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 610322 611116 . - . ID=gene-CCO35_RS10225;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=CCO35_RS10225;old_locus_tag=CCO35_10220 NZ_NPME01000002.1 Protein Homology CDS 610322 611116 . - 0 ID=cds-WP_000734276.1;Parent=gene-CCO35_RS10225;Dbxref=GenBank:WP_000734276.1;Name=WP_000734276.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=CCO35_RS10225;product=adenosylmethionine decarboxylase;protein_id=WP_000734276.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 611137 611997 . - . ID=gene-CCO35_RS10230;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=CCO35_RS10230;old_locus_tag=CCO35_10225 NZ_NPME01000002.1 Protein Homology CDS 611137 611997 . - 0 ID=cds-WP_000829974.1;Parent=gene-CCO35_RS10230;Dbxref=GenBank:WP_000829974.1;Name=WP_000829974.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=CCO35_RS10230;product=polyamine aminopropyltransferase;protein_id=WP_000829974.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 612104 612451 . - . ID=gene-CCO35_RS10235;Name=CCO35_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10235;old_locus_tag=CCO35_10230 NZ_NPME01000002.1 Protein Homology CDS 612104 612451 . - 0 ID=cds-WP_000846613.1;Parent=gene-CCO35_RS10235;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=CCO35_RS10235;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 612653 614263 . + . ID=gene-CCO35_RS10240;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=CCO35_RS10240;old_locus_tag=CCO35_10235 NZ_NPME01000002.1 Protein Homology CDS 612653 614263 . + 0 ID=cds-WP_000946047.1;Parent=gene-CCO35_RS10240;Dbxref=GenBank:WP_000946047.1;Name=WP_000946047.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=CCO35_RS10240;product=multicopper oxidase CueO;protein_id=WP_000946047.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 614341 616731 . - . ID=gene-CCO35_RS10245;Name=CCO35_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10245;old_locus_tag=CCO35_10240 NZ_NPME01000002.1 Protein Homology CDS 614341 616731 . - 0 ID=cds-WP_000829733.1;Parent=gene-CCO35_RS10245;Dbxref=GenBank:WP_000829733.1;Name=WP_000829733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=CCO35_RS10245;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_000829733.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 616937 617473 . + . ID=gene-CCO35_RS10250;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CCO35_RS10250;old_locus_tag=CCO35_10245 NZ_NPME01000002.1 Protein Homology CDS 616937 617473 . + 0 ID=cds-WP_000683342.1;Parent=gene-CCO35_RS10250;Dbxref=GenBank:WP_000683342.1;Name=WP_000683342.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=CCO35_RS10250;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683342.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 617531 618193 . - . ID=gene-CCO35_RS10255;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=CCO35_RS10255;old_locus_tag=CCO35_10250 NZ_NPME01000002.1 Protein Homology CDS 617531 618193 . - 0 ID=cds-WP_000651590.1;Parent=gene-CCO35_RS10255;Dbxref=GenBank:WP_000651590.1;Name=WP_000651590.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=CCO35_RS10255;product=carbonate dehydratase;protein_id=WP_000651590.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 618302 619228 . + . ID=gene-CCO35_RS10260;Name=CCO35_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10260;old_locus_tag=CCO35_10255 NZ_NPME01000002.1 Protein Homology CDS 618302 619228 . + 0 ID=cds-WP_000150617.1;Parent=gene-CCO35_RS10260;Dbxref=GenBank:WP_000150617.1;Name=WP_000150617.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=CCO35_RS10260;product=ABC transporter ATP-binding protein;protein_id=WP_000150617.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 619225 619995 . + . ID=gene-CCO35_RS10265;Name=CCO35_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10265;old_locus_tag=CCO35_10260 NZ_NPME01000002.1 Protein Homology CDS 619225 619995 . + 0 ID=cds-WP_000983418.1;Parent=gene-CCO35_RS10265;Dbxref=GenBank:WP_000983418.1;Name=WP_000983418.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=CCO35_RS10265;product=ABC transporter permease;protein_id=WP_000983418.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 620113 621189 . - . ID=gene-CCO35_RS10270;Name=CCO35_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10270;old_locus_tag=CCO35_10265 NZ_NPME01000002.1 Protein Homology CDS 620113 621189 . - 0 ID=cds-WP_000794036.1;Parent=gene-CCO35_RS10270;Dbxref=GenBank:WP_000794036.1;Name=WP_000794036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=CCO35_RS10270;product=fimbrial protein;protein_id=WP_000794036.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 621198 623744 . - . ID=gene-CCO35_RS10275;Name=CCO35_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10275;old_locus_tag=CCO35_10270 NZ_NPME01000002.1 Protein Homology CDS 621198 623744 . - 0 ID=cds-WP_023136513.1;Parent=gene-CCO35_RS10275;Dbxref=GenBank:WP_023136513.1;Name=WP_023136513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=CCO35_RS10275;product=fimbrial outer membrane usher protein;protein_id=WP_023136513.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 623771 624454 . - . ID=gene-CCO35_RS10280;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=CCO35_RS10280;old_locus_tag=CCO35_10275 NZ_NPME01000002.1 Protein Homology CDS 623771 624454 . - 0 ID=cds-WP_023136514.1;Parent=gene-CCO35_RS10280;Dbxref=GenBank:WP_023136514.1;Name=WP_023136514.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=CCO35_RS10280;product=fimbrial biogenesis chaperone StiB;protein_id=WP_023136514.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 624502 625053 . - . ID=gene-CCO35_RS10285;Name=CCO35_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10285;old_locus_tag=CCO35_10280 NZ_NPME01000002.1 Protein Homology CDS 624502 625053 . - 0 ID=cds-WP_000779119.1;Parent=gene-CCO35_RS10285;Dbxref=GenBank:WP_000779119.1;Name=WP_000779119.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=CCO35_RS10285;product=fimbrial protein;protein_id=WP_000779119.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 625419 625859 . + . ID=gene-CCO35_RS10290;Name=CCO35_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10290;old_locus_tag=CCO35_10285 NZ_NPME01000002.1 Protein Homology CDS 625419 625859 . + 0 ID=cds-WP_000901969.1;Parent=gene-CCO35_RS10290;Dbxref=GenBank:WP_000901969.1;Name=WP_000901969.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=CCO35_RS10290;product=PTS sugar transporter subunit IIA;protein_id=WP_000901969.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 625921 627150 . + . ID=gene-CCO35_RS10295;Name=CCO35_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10295;old_locus_tag=CCO35_10290 NZ_NPME01000002.1 Protein Homology CDS 625921 627150 . + 0 ID=cds-WP_052942887.1;Parent=gene-CCO35_RS10295;Dbxref=GenBank:WP_052942887.1;Name=WP_052942887.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=CCO35_RS10295;product=polysaccharide deacetylase family protein;protein_id=WP_052942887.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 627157 627537 . - . ID=gene-CCO35_RS10300;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CCO35_RS10300;old_locus_tag=CCO35_10295 NZ_NPME01000002.1 Protein Homology CDS 627157 627537 . - 0 ID=cds-WP_052942889.1;Parent=gene-CCO35_RS10300;Dbxref=GenBank:WP_052942889.1;Name=WP_052942889.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=CCO35_RS10300;product=aspartate 1-decarboxylase;protein_id=WP_052942889.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 627632 628486 . - . ID=gene-CCO35_RS10310;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CCO35_RS10310;old_locus_tag=CCO35_10305 NZ_NPME01000002.1 Protein Homology CDS 627632 628486 . - 0 ID=cds-WP_000905340.1;Parent=gene-CCO35_RS10310;Dbxref=GenBank:WP_000905340.1;Name=WP_000905340.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=CCO35_RS10310;product=pantoate--beta-alanine ligase;protein_id=WP_000905340.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 628612 629406 . - . ID=gene-CCO35_RS10315;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CCO35_RS10315;old_locus_tag=CCO35_10310 NZ_NPME01000002.1 Protein Homology CDS 628612 629406 . - 0 ID=cds-WP_000043005.1;Parent=gene-CCO35_RS10315;Dbxref=GenBank:WP_000043005.1;Name=WP_000043005.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043003.1;locus_tag=CCO35_RS10315;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000043005.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 629528 630796 . - . ID=gene-CCO35_RS10320;Name=CCO35_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10320;old_locus_tag=CCO35_10315 NZ_NPME01000002.1 Protein Homology CDS 629528 630796 . - 0 ID=cds-WP_071825185.1;Parent=gene-CCO35_RS10320;Dbxref=GenBank:WP_071825185.1;Name=WP_071825185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218520.1;locus_tag=CCO35_RS10320;product=fimbrial-like adhesin;protein_id=WP_071825185.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 630818 631402 . - . ID=gene-CCO35_RS10325;Name=CCO35_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10325;old_locus_tag=CCO35_10320 NZ_NPME01000002.1 Protein Homology CDS 630818 631402 . - 0 ID=cds-WP_001253713.1;Parent=gene-CCO35_RS10325;Dbxref=GenBank:WP_001253713.1;Name=WP_001253713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218521.1;locus_tag=CCO35_RS10325;product=fimbrial-like protein;protein_id=WP_001253713.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 631414 632022 . - . ID=gene-CCO35_RS10330;Name=staE;gbkey=Gene;gene=staE;gene_biotype=protein_coding;locus_tag=CCO35_RS10330;old_locus_tag=CCO35_10325 NZ_NPME01000002.1 Protein Homology CDS 631414 632022 . - 0 ID=cds-WP_052942890.1;Parent=gene-CCO35_RS10330;Dbxref=GenBank:WP_052942890.1;Name=WP_052942890.1;gbkey=CDS;gene=staE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000745165.1;locus_tag=CCO35_RS10330;product=fimbrial protein StaE;protein_id=WP_052942890.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 632037 632603 . - . ID=gene-CCO35_RS10335;Name=CCO35_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10335;old_locus_tag=CCO35_10330 NZ_NPME01000002.1 Protein Homology CDS 632037 632603 . - 0 ID=cds-WP_001549988.1;Parent=gene-CCO35_RS10335;Dbxref=GenBank:WP_001549988.1;Name=WP_001549988.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542775.1;locus_tag=CCO35_RS10335;product=fimbrial protein;protein_id=WP_001549988.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 632590 635196 . - . ID=gene-CCO35_RS10340;Name=CCO35_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10340;old_locus_tag=CCO35_10335 NZ_NPME01000002.1 Protein Homology CDS 632590 635196 . - 0 ID=cds-WP_052942895.1;Parent=gene-CCO35_RS10340;Dbxref=GenBank:WP_052942895.1;Name=WP_052942895.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406108.1;locus_tag=CCO35_RS10340;product=outer membrane usher protein;protein_id=WP_052942895.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 635256 635993 . - . ID=gene-CCO35_RS10345;Name=CCO35_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10345;old_locus_tag=CCO35_10340 NZ_NPME01000002.1 Protein Homology CDS 635256 635993 . - 0 ID=cds-WP_000019793.1;Parent=gene-CCO35_RS10345;Dbxref=GenBank:WP_000019793.1;Name=WP_000019793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019793.1;locus_tag=CCO35_RS10345;product=fimbrial chaperone;protein_id=WP_000019793.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 636259 636852 . - . ID=gene-CCO35_RS10350;Name=CCO35_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10350;old_locus_tag=CCO35_10345 NZ_NPME01000002.1 Protein Homology CDS 636259 636852 . - 0 ID=cds-WP_000756782.1;Parent=gene-CCO35_RS10350;Dbxref=GenBank:WP_000756782.1;Name=WP_000756782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756782.1;locus_tag=CCO35_RS10350;product=fimbrial protein;protein_id=WP_000756782.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 637255 637734 . - . ID=gene-CCO35_RS10355;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CCO35_RS10355;old_locus_tag=CCO35_10350 NZ_NPME01000002.1 Protein Homology CDS 637255 637734 . - 0 ID=cds-WP_000150780.1;Parent=gene-CCO35_RS10355;Dbxref=GenBank:WP_000150780.1;Name=WP_000150780.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=CCO35_RS10355;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150780.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 637731 639128 . - . ID=gene-CCO35_RS10360;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=CCO35_RS10360;old_locus_tag=CCO35_10355 NZ_NPME01000002.1 Protein Homology CDS 637731 639128 . - 0 ID=cds-WP_204100804.1;Parent=gene-CCO35_RS10360;Dbxref=GenBank:WP_204100804.1;Name=WP_204100804.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=CCO35_RS10360;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204100804.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 639290 640186 . - . ID=gene-CCO35_RS10365;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=CCO35_RS10365;old_locus_tag=CCO35_10360 NZ_NPME01000002.1 Protein Homology CDS 639290 640186 . - 0 ID=cds-WP_001549989.1;Parent=gene-CCO35_RS10365;Dbxref=GenBank:WP_001549989.1;Name=WP_001549989.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=CCO35_RS10365;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_001549989.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 640255 640710 . - . ID=gene-CCO35_RS10370;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=CCO35_RS10370;old_locus_tag=CCO35_10365 NZ_NPME01000002.1 Protein Homology CDS 640255 640710 . - 0 ID=cds-WP_001155232.1;Parent=gene-CCO35_RS10370;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=CCO35_RS10370;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 640887 641591 . - . ID=gene-CCO35_RS10375;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=CCO35_RS10375;old_locus_tag=CCO35_10370 NZ_NPME01000002.1 Protein Homology CDS 640887 641591 . - 0 ID=cds-WP_001628237.1;Parent=gene-CCO35_RS10375;Dbxref=GenBank:WP_001628237.1;Name=WP_001628237.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=CCO35_RS10375;product=DNA/RNA nuclease SfsA;protein_id=WP_001628237.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 641608 642138 . - . ID=gene-CCO35_RS10380;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=CCO35_RS10380;old_locus_tag=CCO35_10375 NZ_NPME01000002.1 Protein Homology CDS 641608 642138 . - 0 ID=cds-WP_001294185.1;Parent=gene-CCO35_RS10380;Dbxref=GenBank:WP_001294185.1;Name=WP_001294185.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=CCO35_RS10380;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294185.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 642211 644640 . + . ID=gene-CCO35_RS10385;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=CCO35_RS10385;old_locus_tag=CCO35_10380 NZ_NPME01000002.1 Protein Homology CDS 642211 644640 . + 0 ID=cds-WP_031568189.1;Parent=gene-CCO35_RS10385;Dbxref=GenBank:WP_031568189.1;Name=WP_031568189.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=CCO35_RS10385;product=ATP-dependent helicase HrpB;protein_id=WP_031568189.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 644781 647300 . + . ID=gene-CCO35_RS10390;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=CCO35_RS10390;old_locus_tag=CCO35_10385 NZ_NPME01000002.1 Protein Homology CDS 644781 647300 . + 0 ID=cds-WP_000918126.1;Parent=gene-CCO35_RS10390;Dbxref=GenBank:WP_000918126.1;Name=WP_000918126.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=CCO35_RS10390;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918126.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 647593 649782 . + . ID=gene-CCO35_RS10395;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=CCO35_RS10395;old_locus_tag=CCO35_10390 NZ_NPME01000002.1 Protein Homology CDS 647593 649782 . + 0 ID=cds-WP_000113219.1;Parent=gene-CCO35_RS10395;Dbxref=GenBank:WP_000113219.1;Name=WP_000113219.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=CCO35_RS10395;product=ferrichrome porin FhuA;protein_id=WP_000113219.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 649831 650628 . + . ID=gene-CCO35_RS10400;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=CCO35_RS10400;old_locus_tag=CCO35_10395 NZ_NPME01000002.1 Protein Homology CDS 649831 650628 . + 0 ID=cds-WP_001157204.1;Parent=gene-CCO35_RS10400;Dbxref=GenBank:WP_001157204.1;Name=WP_001157204.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=CCO35_RS10400;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157204.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 650628 651518 . + . ID=gene-CCO35_RS10405;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=CCO35_RS10405;old_locus_tag=CCO35_10400 NZ_NPME01000002.1 Protein Homology CDS 650628 651518 . + 0 ID=cds-WP_001205359.1;Parent=gene-CCO35_RS10405;Dbxref=GenBank:WP_001205359.1;Name=WP_001205359.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=CCO35_RS10405;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001205359.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 651533 653572 . + . ID=gene-CCO35_RS10410;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=CCO35_RS10410;old_locus_tag=CCO35_10405 NZ_NPME01000002.1 Protein Homology CDS 651533 653572 . + 0 ID=cds-WP_001552179.1;Parent=gene-CCO35_RS10410;Dbxref=GenBank:WP_001552179.1;Name=WP_001552179.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=CCO35_RS10410;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_001552179.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 653663 654943 . - . ID=gene-CCO35_RS10415;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CCO35_RS10415;old_locus_tag=CCO35_10410 NZ_NPME01000002.1 Protein Homology CDS 653663 654943 . - 0 ID=cds-WP_000045249.1;Parent=gene-CCO35_RS10415;Dbxref=GenBank:WP_000045249.1;Name=WP_000045249.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=CCO35_RS10415;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045249.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 655113 656534 . + . ID=gene-CCO35_RS10420;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=CCO35_RS10420;old_locus_tag=CCO35_10415 NZ_NPME01000002.1 Protein Homology CDS 655113 656534 . + 0 ID=cds-WP_000845430.1;Parent=gene-CCO35_RS10420;Dbxref=GenBank:WP_000845430.1;Name=WP_000845430.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=CCO35_RS10420;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845430.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 656616 656960 . + . ID=gene-CCO35_RS10425;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=CCO35_RS10425;old_locus_tag=CCO35_10420 NZ_NPME01000002.1 Protein Homology CDS 656616 656960 . + 0 ID=cds-WP_001278668.1;Parent=gene-CCO35_RS10425;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=CCO35_RS10425;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 657061 657684 . - . ID=gene-CCO35_RS10430;Name=CCO35_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10430;old_locus_tag=CCO35_10425 NZ_NPME01000002.1 Protein Homology CDS 657061 657684 . - 0 ID=cds-WP_000964234.1;Parent=gene-CCO35_RS10430;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=CCO35_RS10430;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 657721 658521 . - . ID=gene-CCO35_RS10435;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=CCO35_RS10435;old_locus_tag=CCO35_10430 NZ_NPME01000002.1 Protein Homology CDS 657721 658521 . - 0 ID=cds-WP_001118835.1;Parent=gene-CCO35_RS10435;Dbxref=GenBank:WP_001118835.1;Name=WP_001118835.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=CCO35_RS10435;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001118835.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 658514 659212 . - . ID=gene-CCO35_RS10440;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=CCO35_RS10440;old_locus_tag=CCO35_10435 NZ_NPME01000002.1 Protein Homology CDS 658514 659212 . - 0 ID=cds-WP_000689822.1;Parent=gene-CCO35_RS10440;Dbxref=GenBank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=CCO35_RS10440;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 659297 660814 . + . ID=gene-CCO35_RS10445;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=CCO35_RS10445;old_locus_tag=CCO35_10440 NZ_NPME01000002.1 Protein Homology CDS 659297 660814 . + 0 ID=cds-WP_000146450.1;Parent=gene-CCO35_RS10445;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=CCO35_RS10445;product=dGTPase;protein_id=WP_000146450.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 660944 662371 . + . ID=gene-CCO35_RS10450;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=CCO35_RS10450;old_locus_tag=CCO35_10445 NZ_NPME01000002.1 Protein Homology CDS 660944 662371 . + 0 ID=cds-WP_000753958.1;Parent=gene-CCO35_RS10450;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=CCO35_RS10450;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 662524 663681 . + . ID=gene-CCO35_RS10455;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=CCO35_RS10455;old_locus_tag=CCO35_10450 NZ_NPME01000002.1 Protein Homology CDS 662524 663681 . + 0 ID=cds-WP_000929420.1;Parent=gene-CCO35_RS10455;Dbxref=GenBank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=CCO35_RS10455;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 663805 666774 . - . ID=gene-CCO35_RS10460;Name=CCO35_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10460;old_locus_tag=CCO35_10455 NZ_NPME01000002.1 Protein Homology CDS 663805 666774 . - 0 ID=cds-WP_031568199.1;Parent=gene-CCO35_RS10460;Dbxref=GenBank:WP_031568199.1;Name=WP_031568199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527551.1;locus_tag=CCO35_RS10460;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_031568199.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 666960 667346 . - . ID=gene-CCO35_RS10465;Name=CCO35_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10465;old_locus_tag=CCO35_10460 NZ_NPME01000002.1 Protein Homology CDS 666960 667346 . - 0 ID=cds-WP_000272193.1;Parent=gene-CCO35_RS10465;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=CCO35_RS10465;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 667593 668894 . + . ID=gene-CCO35_RS10470;Name=CCO35_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10470;old_locus_tag=CCO35_10465 NZ_NPME01000002.1 Protein Homology CDS 667593 668894 . + 0 ID=cds-WP_000017175.1;Parent=gene-CCO35_RS10470;Dbxref=GenBank:WP_000017175.1;Name=WP_000017175.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=CCO35_RS10470;product=MFS transporter;protein_id=WP_000017175.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 668931 669755 . - . ID=gene-CCO35_RS10475;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CCO35_RS10475;old_locus_tag=CCO35_10470 NZ_NPME01000002.1 Protein Homology CDS 668931 669755 . - 0 ID=cds-WP_001186673.1;Parent=gene-CCO35_RS10475;Dbxref=GenBank:WP_001186673.1;Name=WP_001186673.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=CCO35_RS10475;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186673.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 669785 672457 . - . ID=gene-CCO35_RS10480;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=CCO35_RS10480;old_locus_tag=CCO35_10475 NZ_NPME01000002.1 Protein Homology CDS 669785 672457 . - 0 ID=cds-WP_001094523.1;Parent=gene-CCO35_RS10480;Dbxref=GenBank:WP_001094523.1;Name=WP_001094523.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=CCO35_RS10480;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094523.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 672695 673489 . - . ID=gene-CCO35_RS10490;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CCO35_RS10490;old_locus_tag=CCO35_10485 NZ_NPME01000002.1 Protein Homology CDS 672695 673489 . - 0 ID=cds-WP_001018214.1;Parent=gene-CCO35_RS10490;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=CCO35_RS10490;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 673940 674665 . + . ID=gene-CCO35_RS10500;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CCO35_RS10500;old_locus_tag=CCO35_10495 NZ_NPME01000002.1 Protein Homology CDS 673940 674665 . + 0 ID=cds-WP_000246886.1;Parent=gene-CCO35_RS10500;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=CCO35_RS10500;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 674923 675774 . + . ID=gene-CCO35_RS10510;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CCO35_RS10510;old_locus_tag=CCO35_10505 NZ_NPME01000002.1 Protein Homology CDS 674923 675774 . + 0 ID=cds-WP_000808106.1;Parent=gene-CCO35_RS10510;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=CCO35_RS10510;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 675919 676644 . + . ID=gene-CCO35_RS10515;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CCO35_RS10515;old_locus_tag=CCO35_10510 NZ_NPME01000002.1 Protein Homology CDS 675919 676644 . + 0 ID=cds-WP_000224567.1;Parent=gene-CCO35_RS10515;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=CCO35_RS10515;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 676791 677348 . + . ID=gene-CCO35_RS10520;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CCO35_RS10520;old_locus_tag=CCO35_10515 NZ_NPME01000002.1 Protein Homology CDS 676791 677348 . + 0 ID=cds-WP_000622423.1;Parent=gene-CCO35_RS10520;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=CCO35_RS10520;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 677490 678686 . + . ID=gene-CCO35_RS10525;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=CCO35_RS10525;old_locus_tag=CCO35_10520 NZ_NPME01000002.1 Protein Homology CDS 677490 678686 . + 0 ID=cds-WP_000811899.1;Parent=gene-CCO35_RS10525;Dbxref=GenBank:WP_000811899.1;Name=WP_000811899.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=CCO35_RS10525;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811899.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 678999 679757 . + . ID=gene-CCO35_RS10535;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=CCO35_RS10535;old_locus_tag=CCO35_10530 NZ_NPME01000002.1 Protein Homology CDS 678999 679757 . + 0 ID=cds-WP_000947413.1;Parent=gene-CCO35_RS10535;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=CCO35_RS10535;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 679770 680627 . + . ID=gene-CCO35_RS10540;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=CCO35_RS10540;old_locus_tag=CCO35_10535 NZ_NPME01000002.1 Protein Homology CDS 679770 680627 . + 0 ID=cds-WP_000922422.1;Parent=gene-CCO35_RS10540;Dbxref=GenBank:WP_000922422.1;Name=WP_000922422.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=CCO35_RS10540;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 680639 681991 . + . ID=gene-CCO35_RS10545;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CCO35_RS10545;old_locus_tag=CCO35_10540 NZ_NPME01000002.1 Protein Homology CDS 680639 681991 . + 0 ID=cds-WP_000949017.1;Parent=gene-CCO35_RS10545;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=CCO35_RS10545;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 682023 684455 . + . ID=gene-CCO35_RS10550;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=CCO35_RS10550;old_locus_tag=CCO35_10545 NZ_NPME01000002.1 Protein Homology CDS 682023 684455 . + 0 ID=cds-WP_031568208.1;Parent=gene-CCO35_RS10550;Dbxref=GenBank:WP_031568208.1;Name=WP_031568208.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=CCO35_RS10550;product=outer membrane protein assembly factor BamA;protein_id=WP_031568208.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 684578 685063 . + . ID=gene-CCO35_RS10555;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=CCO35_RS10555;old_locus_tag=CCO35_10550 NZ_NPME01000002.1 Protein Homology CDS 684578 685063 . + 0 ID=cds-WP_000758966.1;Parent=gene-CCO35_RS10555;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=CCO35_RS10555;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 685067 686092 . + . ID=gene-CCO35_RS10560;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=CCO35_RS10560;old_locus_tag=CCO35_10555 NZ_NPME01000002.1 Protein Homology CDS 685067 686092 . + 0 ID=cds-WP_001139265.1;Parent=gene-CCO35_RS10560;Dbxref=GenBank:WP_001139265.1;Name=WP_001139265.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=CCO35_RS10560;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 686198 686653 . + . ID=gene-CCO35_RS10565;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CCO35_RS10565;old_locus_tag=CCO35_10560 NZ_NPME01000002.1 Protein Homology CDS 686198 686653 . + 0 ID=cds-WP_000210741.1;Parent=gene-CCO35_RS10565;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=CCO35_RS10565;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 686657 687445 . + . ID=gene-CCO35_RS10570;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=CCO35_RS10570;old_locus_tag=CCO35_10565 NZ_NPME01000002.1 Protein Homology CDS 686657 687445 . + 0 ID=cds-WP_000565950.1;Parent=gene-CCO35_RS10570;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=CCO35_RS10570;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 687445 688593 . + . ID=gene-CCO35_RS10575;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=CCO35_RS10575;old_locus_tag=CCO35_10570 NZ_NPME01000002.1 Protein Homology CDS 687445 688593 . + 0 ID=cds-WP_031568214.1;Parent=gene-CCO35_RS10575;Dbxref=GenBank:WP_031568214.1;Name=WP_031568214.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=CCO35_RS10575;product=lipid-A-disaccharide synthase;protein_id=WP_031568214.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 688590 689186 . + . ID=gene-CCO35_RS10580;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=CCO35_RS10580;old_locus_tag=CCO35_10575 NZ_NPME01000002.1 Protein Homology CDS 688590 689186 . + 0 ID=cds-WP_000569411.1;Parent=gene-CCO35_RS10580;Dbxref=GenBank:WP_000569411.1;Name=WP_000569411.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=CCO35_RS10580;product=ribonuclease HII;protein_id=WP_000569411.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 689210 692692 . + . ID=gene-CCO35_RS10585;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=CCO35_RS10585;old_locus_tag=CCO35_10580 NZ_NPME01000002.1 Protein Homology CDS 689210 692692 . + 0 ID=cds-WP_023207369.1;Parent=gene-CCO35_RS10585;Dbxref=GenBank:WP_023207369.1;Name=WP_023207369.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=CCO35_RS10585;product=DNA polymerase III subunit alpha;protein_id=WP_023207369.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 692705 693664 . + . ID=gene-CCO35_RS10590;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=CCO35_RS10590;old_locus_tag=CCO35_10585 NZ_NPME01000002.1 Protein Homology CDS 692705 693664 . + 0 ID=cds-WP_000055753.1;Parent=gene-CCO35_RS10590;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=CCO35_RS10590;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 693844 695607 . + . ID=gene-CCO35_RS10595;Name=CCO35_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10595;old_locus_tag=CCO35_10590 NZ_NPME01000002.1 Protein Homology CDS 693844 695607 . + 0 ID=cds-WP_000524167.1;Parent=gene-CCO35_RS10595;Dbxref=GenBank:WP_000524167.1;Name=WP_000524167.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=CCO35_RS10595;product=chitinase;protein_id=WP_000524167.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 695683 697824 . + . ID=gene-CCO35_RS10600;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=CCO35_RS10600;old_locus_tag=CCO35_10595 NZ_NPME01000002.1 Protein Homology CDS 695683 697824 . + 0 ID=cds-WP_001021048.1;Parent=gene-CCO35_RS10600;Dbxref=GenBank:WP_001021048.1;Name=WP_001021048.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=CCO35_RS10600;product=lysine decarboxylase LdcC;protein_id=WP_001021048.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 697880 698269 . + . ID=gene-CCO35_RS10605;Name=CCO35_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10605;old_locus_tag=CCO35_10600 NZ_NPME01000002.1 Protein Homology CDS 697880 698269 . + 0 ID=cds-WP_000901088.1;Parent=gene-CCO35_RS10605;Dbxref=GenBank:WP_000901088.1;Name=WP_000901088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=CCO35_RS10605;product=VOC family protein;protein_id=WP_000901088.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 698332 699624 . + . ID=gene-CCO35_RS10610;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CCO35_RS10610;old_locus_tag=CCO35_10605 NZ_NPME01000002.1 Protein Homology CDS 698332 699624 . + 0 ID=cds-WP_000210074.1;Parent=gene-CCO35_RS10610;Dbxref=GenBank:WP_000210074.1;Name=WP_000210074.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=CCO35_RS10610;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000210074.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 699708 699968 . - . ID=gene-CCO35_RS10615;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=CCO35_RS10615;old_locus_tag=CCO35_10610 NZ_NPME01000002.1 Protein Homology CDS 699708 699968 . - 0 ID=cds-WP_000062329.1;Parent=gene-CCO35_RS10615;Dbxref=GenBank:WP_000062329.1;Name=WP_000062329.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=CCO35_RS10615;product=Rho-binding antiterminator;protein_id=WP_000062329.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 699955 700155 . - . ID=gene-CCO35_RS10620;Name=CCO35_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10620;old_locus_tag=CCO35_10615 NZ_NPME01000002.1 Protein Homology CDS 699955 700155 . - 0 ID=cds-WP_001518678.1;Parent=gene-CCO35_RS10620;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=CCO35_RS10620;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 700353 700898 . + . ID=gene-CCO35_RS10625;Name=CCO35_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10625;old_locus_tag=CCO35_10620 NZ_NPME01000002.1 Protein Homology CDS 700353 700898 . + 0 ID=cds-WP_001602272.1;Parent=gene-CCO35_RS10625;Dbxref=GenBank:WP_001602272.1;Name=WP_001602272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=CCO35_RS10625;product=YaeQ family protein;protein_id=WP_001602272.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 700895 701317 . + . ID=gene-CCO35_RS10630;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=CCO35_RS10630;old_locus_tag=CCO35_10625 NZ_NPME01000002.1 Protein Homology CDS 700895 701317 . + 0 ID=cds-WP_000560527.1;Parent=gene-CCO35_RS10630;Dbxref=GenBank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=CCO35_RS10630;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 701349 702050 . + . ID=gene-CCO35_RS10635;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=CCO35_RS10635;old_locus_tag=CCO35_10630 NZ_NPME01000002.1 Protein Homology CDS 701349 702050 . + 0 ID=cds-WP_000252576.1;Parent=gene-CCO35_RS10635;Dbxref=GenBank:WP_000252576.1;Name=WP_000252576.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=CCO35_RS10635;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252576.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 702124 703842 . - . ID=gene-CCO35_RS10640;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=CCO35_RS10640;old_locus_tag=CCO35_10635 NZ_NPME01000002.1 Protein Homology CDS 702124 703842 . - 0 ID=cds-WP_001260672.1;Parent=gene-CCO35_RS10640;Dbxref=GenBank:WP_001260672.1;Name=WP_001260672.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=CCO35_RS10640;product=proline--tRNA ligase;protein_id=WP_001260672.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 703953 704660 . - . ID=gene-CCO35_RS10645;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=CCO35_RS10645;old_locus_tag=CCO35_10640 NZ_NPME01000002.1 Protein Homology CDS 703953 704660 . - 0 ID=cds-WP_000093989.1;Parent=gene-CCO35_RS10645;Dbxref=GenBank:WP_000093989.1;Name=WP_000093989.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=CCO35_RS10645;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093989.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 704657 705061 . - . ID=gene-CCO35_RS10650;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=CCO35_RS10650;old_locus_tag=CCO35_10645 NZ_NPME01000002.1 Protein Homology CDS 704657 705061 . - 0 ID=cds-WP_001202315.1;Parent=gene-CCO35_RS10650;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=CCO35_RS10650;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 705180 705995 . - . ID=gene-CCO35_RS10655;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=CCO35_RS10655;old_locus_tag=CCO35_10650 NZ_NPME01000002.1 Protein Homology CDS 705180 705995 . - 0 ID=cds-WP_000874215.1;Parent=gene-CCO35_RS10655;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=CCO35_RS10655;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 706034 706687 . - . ID=gene-CCO35_RS10660;Name=CCO35_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10660;old_locus_tag=CCO35_10655 NZ_NPME01000002.1 Protein Homology CDS 706034 706687 . - 0 ID=cds-WP_001287486.1;Parent=gene-CCO35_RS10660;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=CCO35_RS10660;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 706680 707711 . - . ID=gene-CCO35_RS10665;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=CCO35_RS10665;old_locus_tag=CCO35_10660 NZ_NPME01000002.1 Protein Homology CDS 706680 707711 . - 0 ID=cds-WP_000594021.1;Parent=gene-CCO35_RS10665;Dbxref=GenBank:WP_000594021.1;Name=WP_000594021.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=CCO35_RS10665;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594021.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 707901 708467 . + . ID=gene-CCO35_RS10670;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=CCO35_RS10670;old_locus_tag=CCO35_10665 NZ_NPME01000002.1 Protein Homology CDS 707901 708467 . + 0 ID=cds-WP_001140160.1;Parent=gene-CCO35_RS10670;Dbxref=GenBank:WP_001140160.1;Name=WP_001140160.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=CCO35_RS10670;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140160.1;transl_table=11 NZ_NPME01000002.1 RefSeq gene 708836 708945 . + . ID=gene-CCO35_RS10675;Name=CCO35_RS10675;end_range=708945,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS10675;old_locus_tag=CCO35_10670;partial=true NZ_NPME01000002.1 cmsearch rRNA 708836 708945 . + . ID=rna-CCO35_RS10675;Parent=gene-CCO35_RS10675;Dbxref=RFAM:RF00177;end_range=708945,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS10675;partial=true;product=16S ribosomal RNA NZ_NPME01000002.1 cmsearch exon 708836 708945 . + . ID=exon-CCO35_RS10675-1;Parent=rna-CCO35_RS10675;Dbxref=RFAM:RF00177;end_range=708945,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS10675;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPME01000020.1 1 944 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000020.1 RefSeq region 1 944 . + . ID=NZ_NPME01000020.1:1..944;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000020.1 RefSeq gene 1 944 . - . ID=gene-CCO35_RS23490;Name=tuf;end_range=944,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CCO35_RS23490;old_locus_tag=CCO35_23470;partial=true;start_range=.,1 NZ_NPME01000020.1 Protein Homology CDS 1 944 . - 0 ID=cds-WP_031571904.1;Parent=gene-CCO35_RS23490;Dbxref=GenBank:WP_031571904.1;Name=WP_031571904.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=944,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=CCO35_RS23490;partial=true;product=elongation factor Tu;protein_id=WP_031571904.1;start_range=.,1;transl_table=11 ##sequence-region NZ_NPME01000021.1 1 608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000021.1 RefSeq region 1 608 . + . ID=NZ_NPME01000021.1:1..608;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000021.1 RefSeq gene 1 608 . + . ID=gene-CCO35_RS23495;Name=CCO35_RS23495;end_range=608,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS23495;old_locus_tag=CCO35_23475;partial=true;start_range=.,1 NZ_NPME01000021.1 cmsearch rRNA 1 608 . + . ID=rna-CCO35_RS23495;Parent=gene-CCO35_RS23495;Dbxref=RFAM:RF02541;end_range=608,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23495;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPME01000021.1 cmsearch exon 1 608 . + . ID=exon-CCO35_RS23495-1;Parent=rna-CCO35_RS23495;Dbxref=RFAM:RF02541;end_range=608,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23495;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPME01000022.1 1 607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000022.1 RefSeq region 1 607 . + . ID=NZ_NPME01000022.1:1..607;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000022.1 RefSeq gene 1 105 . - . ID=gene-CCO35_RS23500;Name=CCO35_RS23500;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS23500;old_locus_tag=CCO35_23480;partial=true;start_range=.,1 NZ_NPME01000022.1 cmsearch rRNA 1 105 . - . ID=rna-CCO35_RS23500;Parent=gene-CCO35_RS23500;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23500;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPME01000022.1 cmsearch exon 1 105 . - . ID=exon-CCO35_RS23500-1;Parent=rna-CCO35_RS23500;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23500;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPME01000022.1 RefSeq gene 288 363 . - . ID=gene-CCO35_RS23505;Name=CCO35_RS23505;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS23505;old_locus_tag=CCO35_23485 NZ_NPME01000022.1 tRNAscan-SE tRNA 288 363 . - . ID=rna-CCO35_RS23505;Parent=gene-CCO35_RS23505;anticodon=(pos:complement(328..330));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23505;product=tRNA-Ala NZ_NPME01000022.1 tRNAscan-SE exon 288 363 . - . ID=exon-CCO35_RS23505-1;Parent=rna-CCO35_RS23505;anticodon=(pos:complement(328..330));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23505;product=tRNA-Ala NZ_NPME01000022.1 RefSeq gene 473 549 . - . ID=gene-CCO35_RS23510;Name=CCO35_RS23510;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS23510;old_locus_tag=CCO35_23490 NZ_NPME01000022.1 tRNAscan-SE tRNA 473 549 . - . ID=rna-CCO35_RS23510;Parent=gene-CCO35_RS23510;anticodon=(pos:complement(513..515));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23510;product=tRNA-Ile NZ_NPME01000022.1 tRNAscan-SE exon 473 549 . - . ID=exon-CCO35_RS23510-1;Parent=rna-CCO35_RS23510;anticodon=(pos:complement(513..515));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23510;product=tRNA-Ile ##sequence-region NZ_NPME01000023.1 1 583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000023.1 RefSeq region 1 583 . + . ID=NZ_NPME01000023.1:1..583;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000023.1 RefSeq gene 1 105 . - . ID=gene-CCO35_RS23515;Name=CCO35_RS23515;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS23515;old_locus_tag=CCO35_23495;partial=true;start_range=.,1 NZ_NPME01000023.1 cmsearch rRNA 1 105 . - . ID=rna-CCO35_RS23515;Parent=gene-CCO35_RS23515;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23515;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPME01000023.1 cmsearch exon 1 105 . - . ID=exon-CCO35_RS23515-1;Parent=rna-CCO35_RS23515;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23515;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPME01000023.1 RefSeq gene 299 374 . - . ID=gene-CCO35_RS23520;Name=CCO35_RS23520;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS23520;old_locus_tag=CCO35_23500 NZ_NPME01000023.1 tRNAscan-SE tRNA 299 374 . - . ID=rna-CCO35_RS23520;Parent=gene-CCO35_RS23520;anticodon=(pos:complement(338..340));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23520;product=tRNA-Glu NZ_NPME01000023.1 tRNAscan-SE exon 299 374 . - . ID=exon-CCO35_RS23520-1;Parent=rna-CCO35_RS23520;anticodon=(pos:complement(338..340));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS23520;product=tRNA-Glu NZ_NPME01000023.1 RefSeq gene 460 583 . - . ID=gene-CCO35_RS23525;Name=CCO35_RS23525;end_range=583,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS23525;old_locus_tag=CCO35_23505;partial=true NZ_NPME01000023.1 cmsearch rRNA 460 583 . - . ID=rna-CCO35_RS23525;Parent=gene-CCO35_RS23525;Dbxref=RFAM:RF00177;end_range=583,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23525;partial=true;product=16S ribosomal RNA NZ_NPME01000023.1 cmsearch exon 460 583 . - . ID=exon-CCO35_RS23525-1;Parent=rna-CCO35_RS23525;Dbxref=RFAM:RF00177;end_range=583,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23525;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPME01000024.1 1 562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000024.1 RefSeq region 1 562 . + . ID=NZ_NPME01000024.1:1..562;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000024.1 RefSeq gene 23 562 . + . ID=gene-CCO35_RS23530;Name=CCO35_RS23530;end_range=562,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS23530;old_locus_tag=CCO35_23510;partial=true NZ_NPME01000024.1 cmsearch rRNA 23 562 . + . ID=rna-CCO35_RS23530;Parent=gene-CCO35_RS23530;Dbxref=RFAM:RF02541;end_range=562,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23530;partial=true;product=23S ribosomal RNA NZ_NPME01000024.1 cmsearch exon 23 562 . + . ID=exon-CCO35_RS23530-1;Parent=rna-CCO35_RS23530;Dbxref=RFAM:RF02541;end_range=562,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23530;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPME01000025.1 1 523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000025.1 RefSeq region 1 523 . + . ID=NZ_NPME01000025.1:1..523;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000025.1 RefSeq gene 1 523 . - . ID=gene-CCO35_RS23535;Name=CCO35_RS23535;end_range=523,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS23535;old_locus_tag=CCO35_23515;partial=true;start_range=.,1 NZ_NPME01000025.1 cmsearch rRNA 1 523 . - . ID=rna-CCO35_RS23535;Parent=gene-CCO35_RS23535;Dbxref=RFAM:RF02541;end_range=523,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23535;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPME01000025.1 cmsearch exon 1 523 . - . ID=exon-CCO35_RS23535-1;Parent=rna-CCO35_RS23535;Dbxref=RFAM:RF02541;end_range=523,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS23535;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPME01000003.1 1 637918 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000003.1 RefSeq region 1 637918 . + . ID=NZ_NPME01000003.1:1..637918;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000003.1 RefSeq gene 1 110 . - . ID=gene-CCO35_RS10680;Name=CCO35_RS10680;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS10680;old_locus_tag=CCO35_10675;partial=true;start_range=.,1 NZ_NPME01000003.1 cmsearch rRNA 1 110 . - . ID=rna-CCO35_RS10680;Parent=gene-CCO35_RS10680;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS10680;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_NPME01000003.1 cmsearch exon 1 110 . - . ID=exon-CCO35_RS10680-1;Parent=rna-CCO35_RS10680;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS10680;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_NPME01000003.1 RefSeq gene 566 3139 . - . ID=gene-CCO35_RS10685;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CCO35_RS10685;old_locus_tag=CCO35_10680 NZ_NPME01000003.1 Protein Homology CDS 566 3139 . - 0 ID=cds-WP_001235092.1;Parent=gene-CCO35_RS10685;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=CCO35_RS10685;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 3269 4000 . - . ID=gene-CCO35_RS10690;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=CCO35_RS10690;old_locus_tag=CCO35_10685 NZ_NPME01000003.1 Protein Homology CDS 3269 4000 . - 0 ID=cds-WP_000992639.1;Parent=gene-CCO35_RS10690;Dbxref=GenBank:WP_000992639.1;Name=WP_000992639.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=CCO35_RS10690;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992639.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 3997 4977 . - . ID=gene-CCO35_RS10695;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=CCO35_RS10695;old_locus_tag=CCO35_10690 NZ_NPME01000003.1 Protein Homology CDS 3997 4977 . - 0 ID=cds-WP_000079130.1;Parent=gene-CCO35_RS10695;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=CCO35_RS10695;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 5109 5846 . + . ID=gene-CCO35_RS10700;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=CCO35_RS10700;old_locus_tag=CCO35_10695 NZ_NPME01000003.1 Protein Homology CDS 5109 5846 . + 0 ID=cds-WP_000197660.1;Parent=gene-CCO35_RS10700;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=CCO35_RS10700;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 6118 6456 . + . ID=gene-CCO35_RS10705;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CCO35_RS10705;old_locus_tag=CCO35_10700 NZ_NPME01000003.1 Protein Homology CDS 6118 6456 . + 0 ID=cds-WP_000178449.1;Parent=gene-CCO35_RS10705;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=CCO35_RS10705;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11 NZ_NPME01000003.1 cmsearch sequence_feature 6559 6684 . + . ID=id-NZ_NPME01000003.1:6559..6684;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPME01000003.1 RefSeq gene 6560 6607 . + . ID=gene-CCO35_RS23645;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=CCO35_RS23645 NZ_NPME01000003.1 Protein Homology CDS 6560 6607 . + 0 ID=cds-WP_010989056.1;Parent=gene-CCO35_RS23645;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=CCO35_RS23645;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 6707 7867 . + . ID=gene-CCO35_RS10710;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=CCO35_RS10710;old_locus_tag=CCO35_10705 NZ_NPME01000003.1 Protein Homology CDS 6707 7867 . + 0 ID=cds-WP_000200080.1;Parent=gene-CCO35_RS10710;Dbxref=GenBank:WP_000200080.1;Name=WP_000200080.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=CCO35_RS10710;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200080.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 7828 8736 . - . ID=gene-CCO35_RS10715;Name=CCO35_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10715;old_locus_tag=CCO35_10710 NZ_NPME01000003.1 Protein Homology CDS 7828 8736 . - 0 ID=cds-WP_031571256.1;Parent=gene-CCO35_RS10715;Dbxref=GenBank:WP_031571256.1;Name=WP_031571256.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=CCO35_RS10715;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_031571256.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 8794 9915 . - . ID=gene-CCO35_RS10720;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=CCO35_RS10720;old_locus_tag=CCO35_10715 NZ_NPME01000003.1 Protein Homology CDS 8794 9915 . - 0 ID=cds-WP_000225187.1;Parent=gene-CCO35_RS10720;Dbxref=GenBank:WP_000225187.1;Name=WP_000225187.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=CCO35_RS10720;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225187.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 9925 10995 . - . ID=gene-CCO35_RS10725;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=CCO35_RS10725;old_locus_tag=CCO35_10720 NZ_NPME01000003.1 Protein Homology CDS 9925 10995 . - 0 ID=cds-WP_001168062.1;Parent=gene-CCO35_RS10725;Dbxref=GenBank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=CCO35_RS10725;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 11435 11953 . + . ID=gene-CCO35_RS10730;Name=CCO35_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10730;old_locus_tag=CCO35_10725 NZ_NPME01000003.1 Protein Homology CDS 11435 11953 . + 0 ID=cds-WP_001212377.1;Parent=gene-CCO35_RS10730;Dbxref=GenBank:WP_001212377.1;Name=WP_001212377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=CCO35_RS10730;product=YfiR family protein;protein_id=WP_001212377.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 11946 13166 . + . ID=gene-CCO35_RS10735;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=CCO35_RS10735;old_locus_tag=CCO35_10730 NZ_NPME01000003.1 Protein Homology CDS 11946 13166 . + 0 ID=cds-WP_001030989.1;Parent=gene-CCO35_RS10735;Dbxref=GenBank:WP_001030989.1;Name=WP_001030989.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=CCO35_RS10735;product=diguanylate cyclase DgcN;protein_id=WP_001030989.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 13322 13669 . - . ID=gene-CCO35_RS10740;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CCO35_RS10740;old_locus_tag=CCO35_10735 NZ_NPME01000003.1 Protein Homology CDS 13322 13669 . - 0 ID=cds-WP_000065257.1;Parent=gene-CCO35_RS10740;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=CCO35_RS10740;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 13710 14477 . - . ID=gene-CCO35_RS10745;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CCO35_RS10745;old_locus_tag=CCO35_10740 NZ_NPME01000003.1 Protein Homology CDS 13710 14477 . - 0 ID=cds-WP_000469807.1;Parent=gene-CCO35_RS10745;Dbxref=GenBank:WP_000469807.1;Name=WP_000469807.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=CCO35_RS10745;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469807.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 14522 15070 . - . ID=gene-CCO35_RS10750;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CCO35_RS10750;old_locus_tag=CCO35_10745 NZ_NPME01000003.1 Protein Homology CDS 14522 15070 . - 0 ID=cds-WP_000043266.1;Parent=gene-CCO35_RS10750;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=CCO35_RS10750;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 15089 15337 . - . ID=gene-CCO35_RS10755;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CCO35_RS10755;old_locus_tag=CCO35_10750 NZ_NPME01000003.1 Protein Homology CDS 15089 15337 . - 0 ID=cds-WP_000256453.1;Parent=gene-CCO35_RS10755;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=CCO35_RS10755;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 15590 16951 . - . ID=gene-CCO35_RS10760;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CCO35_RS10760;old_locus_tag=CCO35_10755 NZ_NPME01000003.1 Protein Homology CDS 15590 16951 . - 0 ID=cds-WP_000460052.1;Parent=gene-CCO35_RS10760;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=CCO35_RS10760;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 17117 17908 . + . ID=gene-CCO35_RS10765;Name=CCO35_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10765;old_locus_tag=CCO35_10760 NZ_NPME01000003.1 Protein Homology CDS 17117 17908 . + 0 ID=cds-WP_001537507.1;Parent=gene-CCO35_RS10765;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=CCO35_RS10765;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 17928 19214 . + . ID=gene-CCO35_RS10770;Name=CCO35_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10770;old_locus_tag=CCO35_10765 NZ_NPME01000003.1 Protein Homology CDS 17928 19214 . + 0 ID=cds-WP_127908301.1;Parent=gene-CCO35_RS10770;Dbxref=GenBank:WP_127908301.1;Name=WP_127908301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=CCO35_RS10770;product=HlyC/CorC family transporter;protein_id=WP_127908301.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 19344 19949 . + . ID=gene-CCO35_RS10775;Name=CCO35_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10775;old_locus_tag=CCO35_10770 NZ_NPME01000003.1 Protein Homology CDS 19344 19949 . + 0 ID=cds-WP_023208252.1;Parent=gene-CCO35_RS10775;Dbxref=GenBank:WP_023208252.1;Name=WP_023208252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271805.1;locus_tag=CCO35_RS10775;product=DUF6630 family protein;protein_id=WP_023208252.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 19984 20574 . - . ID=gene-CCO35_RS10780;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CCO35_RS10780;old_locus_tag=CCO35_10775 NZ_NPME01000003.1 Protein Homology CDS 19984 20574 . - 0 ID=cds-WP_001518875.1;Parent=gene-CCO35_RS10780;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=CCO35_RS10780;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 20697 21575 . + . ID=gene-CCO35_RS10790;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=CCO35_RS10790;old_locus_tag=CCO35_10785 NZ_NPME01000003.1 Protein Homology CDS 20697 21575 . + 0 ID=cds-WP_001059155.1;Parent=gene-CCO35_RS10790;Dbxref=GenBank:WP_001059155.1;Name=WP_001059155.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=CCO35_RS10790;product=NAD(+) kinase;protein_id=WP_001059155.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 21661 23322 . + . ID=gene-CCO35_RS10795;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CCO35_RS10795;old_locus_tag=CCO35_10790 NZ_NPME01000003.1 Protein Homology CDS 21661 23322 . + 0 ID=cds-WP_001528556.1;Parent=gene-CCO35_RS10795;Dbxref=GenBank:WP_001528556.1;Name=WP_001528556.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=CCO35_RS10795;product=DNA repair protein RecN;protein_id=WP_001528556.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 23471 23809 . + . ID=gene-CCO35_RS10800;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=CCO35_RS10800;old_locus_tag=CCO35_10795 NZ_NPME01000003.1 Protein Homology CDS 23471 23809 . + 0 ID=cds-WP_001203445.1;Parent=gene-CCO35_RS10800;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=CCO35_RS10800;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 23970 24260 . - . ID=gene-CCO35_RS10805;Name=CCO35_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10805;old_locus_tag=CCO35_10800 NZ_NPME01000003.1 Protein Homology CDS 23970 24260 . - 0 ID=cds-WP_001112990.1;Parent=gene-CCO35_RS10805;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=CCO35_RS10805;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 24250 24687 . - . ID=gene-CCO35_RS10810;Name=CCO35_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10810;old_locus_tag=CCO35_10805 NZ_NPME01000003.1 Protein Homology CDS 24250 24687 . - 0 ID=cds-WP_001543334.1;Parent=gene-CCO35_RS10810;Dbxref=GenBank:WP_001543334.1;Name=WP_001543334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=CCO35_RS10810;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001543334.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 24876 25358 . + . ID=gene-CCO35_RS10815;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CCO35_RS10815;old_locus_tag=CCO35_10810 NZ_NPME01000003.1 Protein Homology CDS 24876 25358 . + 0 ID=cds-WP_001518569.1;Parent=gene-CCO35_RS10815;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=CCO35_RS10815;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 25972 37446 . + . ID=gene-CCO35_RS10820;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=CCO35_RS10820;old_locus_tag=CCO35_10815 NZ_NPME01000003.1 Protein Homology CDS 25972 37446 . + 0 ID=cds-WP_031571226.1;Parent=gene-CCO35_RS10820;Dbxref=GenBank:WP_031571226.1;Name=WP_031571226.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=CCO35_RS10820;product=biofilm-associated protein BapA;protein_id=WP_031571226.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 37511 38920 . + . ID=gene-CCO35_RS10825;Name=CCO35_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10825;old_locus_tag=CCO35_10820 NZ_NPME01000003.1 Protein Homology CDS 37511 38920 . + 0 ID=cds-WP_001528538.1;Parent=gene-CCO35_RS10825;Dbxref=GenBank:WP_001528538.1;Name=WP_001528538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=CCO35_RS10825;product=TolC family outer membrane protein;protein_id=WP_001528538.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 38917 41097 . + . ID=gene-CCO35_RS10830;Name=CCO35_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10830;old_locus_tag=CCO35_10825 NZ_NPME01000003.1 Protein Homology CDS 38917 41097 . + 0 ID=cds-WP_031571223.1;Parent=gene-CCO35_RS10830;Dbxref=GenBank:WP_031571223.1;Name=WP_031571223.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=CCO35_RS10830;product=type I secretion system permease/ATPase;protein_id=WP_031571223.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 41105 42268 . + . ID=gene-CCO35_RS10835;Name=CCO35_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10835;old_locus_tag=CCO35_10830 NZ_NPME01000003.1 Protein Homology CDS 41105 42268 . + 0 ID=cds-WP_072101562.1;Parent=gene-CCO35_RS10835;Dbxref=GenBank:WP_072101562.1;Name=WP_072101562.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=CCO35_RS10835;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_072101562.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 42340 42702 . + . ID=gene-CCO35_RS10840;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CCO35_RS10840;old_locus_tag=CCO35_10835 NZ_NPME01000003.1 cmsearch tmRNA 42340 42702 . + . ID=rna-CCO35_RS10840;Parent=gene-CCO35_RS10840;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS10840;product=transfer-messenger RNA NZ_NPME01000003.1 cmsearch exon 42340 42702 . + . ID=exon-CCO35_RS10840-1;Parent=rna-CCO35_RS10840;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS10840;product=transfer-messenger RNA NZ_NPME01000003.1 RefSeq gene 42820 43038 . - . ID=gene-CCO35_RS10845;Name=CCO35_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10845;old_locus_tag=CCO35_10840 NZ_NPME01000003.1 Protein Homology CDS 42820 43038 . - 0 ID=cds-WP_000980498.1;Parent=gene-CCO35_RS10845;Dbxref=GenBank:WP_000980498.1;Name=WP_000980498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461622.1;locus_tag=CCO35_RS10845;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000980498.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 43107 44207 . - . ID=gene-CCO35_RS10850;Name=CCO35_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10850;old_locus_tag=CCO35_10845 NZ_NPME01000003.1 Protein Homology CDS 43107 44207 . - 0 ID=cds-WP_094965340.1;Parent=gene-CCO35_RS10850;Dbxref=GenBank:WP_094965340.1;Name=WP_094965340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=CCO35_RS10850;product=phage late control D family protein;protein_id=WP_094965340.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 44204 44689 . - . ID=gene-CCO35_RS10855;Name=CCO35_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10855;old_locus_tag=CCO35_10850 NZ_NPME01000003.1 Protein Homology CDS 44204 44689 . - 0 ID=cds-WP_000980409.1;Parent=gene-CCO35_RS10855;Dbxref=GenBank:WP_000980409.1;Name=WP_000980409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=CCO35_RS10855;product=phage tail protein;protein_id=WP_000980409.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 44686 47493 . - . ID=gene-CCO35_RS10860;Name=CCO35_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10860;old_locus_tag=CCO35_10855 NZ_NPME01000003.1 Protein Homology CDS 44686 47493 . - 0 ID=cds-WP_094965341.1;Parent=gene-CCO35_RS10860;Dbxref=GenBank:WP_094965341.1;Name=WP_094965341.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461625.1;locus_tag=CCO35_RS10860;product=phage tail tape measure protein;protein_id=WP_094965341.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 47486 47605 . - . ID=gene-CCO35_RS10865;Name=CCO35_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10865;old_locus_tag=CCO35_10860 NZ_NPME01000003.1 Protein Homology CDS 47486 47605 . - 0 ID=cds-WP_000763316.1;Parent=gene-CCO35_RS10865;Dbxref=GenBank:WP_000763316.1;Name=WP_000763316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=CCO35_RS10865;product=GpE family phage tail protein;protein_id=WP_000763316.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 47620 47922 . - . ID=gene-CCO35_RS10870;Name=CCO35_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10870;old_locus_tag=CCO35_10865 NZ_NPME01000003.1 Protein Homology CDS 47620 47922 . - 0 ID=cds-WP_001280962.1;Parent=gene-CCO35_RS10870;Dbxref=GenBank:WP_001280962.1;Name=WP_001280962.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=CCO35_RS10870;product=phage tail assembly protein;protein_id=WP_001280962.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 47977 48492 . - . ID=gene-CCO35_RS10875;Name=CCO35_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10875;old_locus_tag=CCO35_10870 NZ_NPME01000003.1 Protein Homology CDS 47977 48492 . - 0 ID=cds-WP_001207647.1;Parent=gene-CCO35_RS10875;Dbxref=GenBank:WP_001207647.1;Name=WP_001207647.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=CCO35_RS10875;product=phage major tail tube protein;protein_id=WP_001207647.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 48502 49674 . - . ID=gene-CCO35_RS10880;Name=CCO35_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10880;old_locus_tag=CCO35_10875 NZ_NPME01000003.1 Protein Homology CDS 48502 49674 . - 0 ID=cds-WP_000046109.1;Parent=gene-CCO35_RS10880;Dbxref=GenBank:WP_000046109.1;Name=WP_000046109.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=CCO35_RS10880;product=phage tail sheath protein;protein_id=WP_000046109.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 49805 50332 . - . ID=gene-CCO35_RS10885;Name=CCO35_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10885;old_locus_tag=CCO35_10880 NZ_NPME01000003.1 Protein Homology CDS 49805 50332 . - 0 ID=cds-WP_000680168.1;Parent=gene-CCO35_RS10885;Dbxref=GenBank:WP_000680168.1;Name=WP_000680168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461177.1;locus_tag=CCO35_RS10885;product=tail fiber assembly protein;protein_id=WP_000680168.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 50335 52101 . - . ID=gene-CCO35_RS10890;Name=CCO35_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10890;old_locus_tag=CCO35_10885 NZ_NPME01000003.1 Protein Homology CDS 50335 52101 . - 0 ID=cds-WP_094965342.1;Parent=gene-CCO35_RS10890;Dbxref=GenBank:WP_094965342.1;Name=WP_094965342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835202.1;locus_tag=CCO35_RS10890;product=phage tail protein;protein_id=WP_094965342.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 52098 52703 . - . ID=gene-CCO35_RS10895;Name=CCO35_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10895;old_locus_tag=CCO35_10890 NZ_NPME01000003.1 Protein Homology CDS 52098 52703 . - 0 ID=cds-WP_063328732.1;Parent=gene-CCO35_RS10895;Dbxref=GenBank:WP_063328732.1;Name=WP_063328732.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461635.1;locus_tag=CCO35_RS10895;product=phage tail protein I;protein_id=WP_063328732.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 52696 53604 . - . ID=gene-CCO35_RS10900;Name=CCO35_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10900;old_locus_tag=CCO35_10895 NZ_NPME01000003.1 Protein Homology CDS 52696 53604 . - 0 ID=cds-WP_000268275.1;Parent=gene-CCO35_RS10900;Dbxref=GenBank:WP_000268275.1;Name=WP_000268275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461636.1;locus_tag=CCO35_RS10900;product=baseplate assembly protein;protein_id=WP_000268275.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 53591 53950 . - . ID=gene-CCO35_RS10905;Name=CCO35_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10905;old_locus_tag=CCO35_10900 NZ_NPME01000003.1 Protein Homology CDS 53591 53950 . - 0 ID=cds-WP_000177401.1;Parent=gene-CCO35_RS10905;Dbxref=GenBank:WP_000177401.1;Name=WP_000177401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461637.1;locus_tag=CCO35_RS10905;product=GPW/gp25 family protein;protein_id=WP_000177401.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 53947 54525 . - . ID=gene-CCO35_RS10910;Name=CCO35_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10910;old_locus_tag=CCO35_10905 NZ_NPME01000003.1 Protein Homology CDS 53947 54525 . - 0 ID=cds-WP_063328731.1;Parent=gene-CCO35_RS10910;Dbxref=GenBank:WP_063328731.1;Name=WP_063328731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461638.1;locus_tag=CCO35_RS10910;product=phage baseplate assembly protein V;protein_id=WP_063328731.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 54664 56370 . + . ID=gene-CCO35_RS10915;Name=CCO35_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10915;old_locus_tag=CCO35_10910 NZ_NPME01000003.1 Protein Homology CDS 54664 56370 . + 0 ID=cds-WP_023184683.1;Parent=gene-CCO35_RS10915;Dbxref=GenBank:WP_023184683.1;Name=WP_023184683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400690.1;locus_tag=CCO35_RS10915;product=AIPR family protein;protein_id=WP_023184683.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 56421 56864 . - . ID=gene-CCO35_RS10920;Name=CCO35_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10920;old_locus_tag=CCO35_10915 NZ_NPME01000003.1 Protein Homology CDS 56421 56864 . - 0 ID=cds-WP_063328730.1;Parent=gene-CCO35_RS10920;Dbxref=GenBank:WP_063328730.1;Name=WP_063328730.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829115.1;locus_tag=CCO35_RS10920;product=phage virion morphogenesis protein;protein_id=WP_063328730.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 56857 57288 . - . ID=gene-CCO35_RS10925;Name=CCO35_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10925;old_locus_tag=CCO35_10920 NZ_NPME01000003.1 Protein Homology CDS 56857 57288 . - 0 ID=cds-WP_063328729.1;Parent=gene-CCO35_RS10925;Dbxref=GenBank:WP_063328729.1;Name=WP_063328729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461640.1;locus_tag=CCO35_RS10925;product=phage tail protein;protein_id=WP_063328729.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 57251 57496 . - . ID=gene-CCO35_RS24040;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO35_RS24040;old_locus_tag=CCO35_10925 NZ_NPME01000003.1 Protein Homology CDS 57251 57496 . - 0 ID=cds-WP_223617445.1;Parent=gene-CCO35_RS24040;Dbxref=GenBank:WP_223617445.1;Name=WP_223617445.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461641.1;locus_tag=CCO35_RS24040;product=Rz1-like lysis system protein LysC;protein_id=WP_223617445.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 57384 57812 . - . ID=gene-CCO35_RS10935;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=CCO35_RS10935;old_locus_tag=CCO35_10930 NZ_NPME01000003.1 Protein Homology CDS 57384 57812 . - 0 ID=cds-WP_063328728.1;Parent=gene-CCO35_RS10935;Dbxref=GenBank:WP_063328728.1;Name=WP_063328728.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461642.1;locus_tag=CCO35_RS10935;product=Rz-like lysis system protein LysB;protein_id=WP_063328728.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 57809 58324 . - . ID=gene-CCO35_RS10940;Name=CCO35_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10940;old_locus_tag=CCO35_10935 NZ_NPME01000003.1 Protein Homology CDS 57809 58324 . - 0 ID=cds-WP_063328727.1;Parent=gene-CCO35_RS10940;Dbxref=GenBank:WP_063328727.1;Name=WP_063328727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206870.1;locus_tag=CCO35_RS10940;product=lysozyme;protein_id=WP_063328727.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 58305 58520 . - . ID=gene-CCO35_RS10945;Name=CCO35_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10945;old_locus_tag=CCO35_10940 NZ_NPME01000003.1 Protein Homology CDS 58305 58520 . - 0 ID=cds-WP_000171565.1;Parent=gene-CCO35_RS10945;Dbxref=GenBank:WP_000171565.1;Name=WP_000171565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461644.1;locus_tag=CCO35_RS10945;product=HP1 family phage holin;protein_id=WP_000171565.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 58524 58727 . - . ID=gene-CCO35_RS10950;Name=CCO35_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10950;old_locus_tag=CCO35_10945 NZ_NPME01000003.1 Protein Homology CDS 58524 58727 . - 0 ID=cds-WP_063328726.1;Parent=gene-CCO35_RS10950;Dbxref=GenBank:WP_063328726.1;Name=WP_063328726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461645.1;locus_tag=CCO35_RS10950;product=tail protein X;protein_id=WP_063328726.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 58727 59191 . - . ID=gene-CCO35_RS10955;Name=CCO35_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10955;old_locus_tag=CCO35_10950 NZ_NPME01000003.1 Protein Homology CDS 58727 59191 . - 0 ID=cds-WP_063328725.1;Parent=gene-CCO35_RS10955;Dbxref=GenBank:WP_063328725.1;Name=WP_063328725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461646.1;locus_tag=CCO35_RS10955;product=head completion/stabilization protein;protein_id=WP_063328725.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 59285 59935 . - . ID=gene-CCO35_RS10960;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=CCO35_RS10960;old_locus_tag=CCO35_10955 NZ_NPME01000003.1 Protein Homology CDS 59285 59935 . - 0 ID=cds-WP_063328724.1;Parent=gene-CCO35_RS10960;Dbxref=GenBank:WP_063328724.1;Name=WP_063328724.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461647.1;locus_tag=CCO35_RS10960;product=phage terminase small subunit;protein_id=WP_063328724.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 59939 61000 . - . ID=gene-CCO35_RS10965;Name=CCO35_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10965;old_locus_tag=CCO35_10960 NZ_NPME01000003.1 Protein Homology CDS 59939 61000 . - 0 ID=cds-WP_063328723.1;Parent=gene-CCO35_RS10965;Dbxref=GenBank:WP_063328723.1;Name=WP_063328723.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001714844.1;locus_tag=CCO35_RS10965;product=phage major capsid protein%2C P2 family;protein_id=WP_063328723.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 61017 61850 . - . ID=gene-CCO35_RS10970;Name=CCO35_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10970;old_locus_tag=CCO35_10965 NZ_NPME01000003.1 Protein Homology CDS 61017 61850 . - 0 ID=cds-WP_000216276.1;Parent=gene-CCO35_RS10970;Dbxref=GenBank:WP_000216276.1;Name=WP_000216276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461649.1;locus_tag=CCO35_RS10970;product=GPO family capsid scaffolding protein;protein_id=WP_000216276.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 61993 63759 . + . ID=gene-CCO35_RS10975;Name=CCO35_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10975;old_locus_tag=CCO35_10970 NZ_NPME01000003.1 Protein Homology CDS 61993 63759 . + 0 ID=cds-WP_063328722.1;Parent=gene-CCO35_RS10975;Dbxref=GenBank:WP_063328722.1;Name=WP_063328722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461650.1;locus_tag=CCO35_RS10975;product=terminase ATPase subunit family protein;protein_id=WP_063328722.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 63759 64799 . + . ID=gene-CCO35_RS10980;Name=CCO35_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10980;old_locus_tag=CCO35_10975 NZ_NPME01000003.1 Protein Homology CDS 63759 64799 . + 0 ID=cds-WP_063328721.1;Parent=gene-CCO35_RS10980;Dbxref=GenBank:WP_063328721.1;Name=WP_063328721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542203.1;locus_tag=CCO35_RS10980;product=phage portal protein;protein_id=WP_063328721.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 64903 66567 . - . ID=gene-CCO35_RS10985;Name=CCO35_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10985;old_locus_tag=CCO35_10980 NZ_NPME01000003.1 Protein Homology CDS 64903 66567 . - 0 ID=cds-WP_001284991.1;Parent=gene-CCO35_RS10985;Dbxref=GenBank:WP_001284991.1;Name=WP_001284991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284991.1;locus_tag=CCO35_RS10985;product=AIPR family protein;protein_id=WP_001284991.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 67089 67895 . + . ID=gene-CCO35_RS10995;Name=CCO35_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS10995;old_locus_tag=CCO35_10990 NZ_NPME01000003.1 Protein Homology CDS 67089 67895 . + 0 ID=cds-WP_065317527.1;Parent=gene-CCO35_RS10995;Dbxref=GenBank:WP_065317527.1;Name=WP_065317527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751928.1;locus_tag=CCO35_RS10995;product=DUF6694 family lipoprotein;protein_id=WP_065317527.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 68006 68305 . + . ID=gene-CCO35_RS11000;Name=CCO35_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11000;old_locus_tag=CCO35_10995 NZ_NPME01000003.1 GeneMarkS-2+ CDS 68006 68305 . + 0 ID=cds-WP_000790439.1;Parent=gene-CCO35_RS11000;Dbxref=GenBank:WP_000790439.1;Name=WP_000790439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS11000;product=hypothetical protein;protein_id=WP_000790439.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 68374 68562 . - . ID=gene-CCO35_RS11005;Name=CCO35_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11005;old_locus_tag=CCO35_11000 NZ_NPME01000003.1 Protein Homology CDS 68374 68562 . - 0 ID=cds-WP_001154444.1;Parent=gene-CCO35_RS11005;Dbxref=GenBank:WP_001154444.1;Name=WP_001154444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406337.1;locus_tag=CCO35_RS11005;product=hypothetical protein;protein_id=WP_001154444.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 68718 71129 . - . ID=gene-CCO35_RS11010;Name=CCO35_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11010;old_locus_tag=CCO35_11005 NZ_NPME01000003.1 Protein Homology CDS 68718 71129 . - 0 ID=cds-WP_094965343.1;Parent=gene-CCO35_RS11010;Dbxref=GenBank:WP_094965343.1;Name=WP_094965343.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406336.1;locus_tag=CCO35_RS11010;product=replication endonuclease;protein_id=WP_094965343.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 71120 71977 . - . ID=gene-CCO35_RS11015;Name=CCO35_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11015;old_locus_tag=CCO35_11010 NZ_NPME01000003.1 Protein Homology CDS 71120 71977 . - 0 ID=cds-WP_094965344.1;Parent=gene-CCO35_RS11015;Dbxref=GenBank:WP_094965344.1;Name=WP_094965344.1;Ontology_term=GO:0032259,GO:0032775,GO:0008757,GO:0009007,GO:0043565,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,sequence-specific DNA binding|0043565||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA,obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461657.1;locus_tag=CCO35_RS11015;product=DNA adenine methylase;protein_id=WP_094965344.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 71974 72201 . - . ID=gene-CCO35_RS11020;Name=CCO35_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11020;old_locus_tag=CCO35_11015 NZ_NPME01000003.1 Protein Homology CDS 71974 72201 . - 0 ID=cds-WP_000785509.1;Parent=gene-CCO35_RS11020;Dbxref=GenBank:WP_000785509.1;Name=WP_000785509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461658.1;locus_tag=CCO35_RS11020;product=TraR/DksA family transcriptional regulator;protein_id=WP_000785509.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 72201 72434 . - . ID=gene-CCO35_RS11025;Name=CCO35_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11025;old_locus_tag=CCO35_11020 NZ_NPME01000003.1 Protein Homology CDS 72201 72434 . - 0 ID=cds-WP_001244234.1;Parent=gene-CCO35_RS11025;Dbxref=GenBank:WP_001244234.1;Name=WP_001244234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461659.1;locus_tag=CCO35_RS11025;product=DUF2732 domain-containing protein;protein_id=WP_001244234.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 72502 72843 . - . ID=gene-CCO35_RS11030;Name=CCO35_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11030;old_locus_tag=CCO35_11025 NZ_NPME01000003.1 Protein Homology CDS 72502 72843 . - 0 ID=cds-WP_000963195.1;Parent=gene-CCO35_RS11030;Dbxref=GenBank:WP_000963195.1;Name=WP_000963195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461660.1;locus_tag=CCO35_RS11030;product=DUF5347 domain-containing protein;protein_id=WP_000963195.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 73063 73521 . + . ID=gene-CCO35_RS11035;Name=CCO35_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11035;old_locus_tag=CCO35_11030 NZ_NPME01000003.1 Protein Homology CDS 73063 73521 . + 0 ID=cds-WP_000166366.1;Parent=gene-CCO35_RS11035;Dbxref=GenBank:WP_000166366.1;Name=WP_000166366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461661.1;locus_tag=CCO35_RS11035;product=hypothetical protein;protein_id=WP_000166366.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 73469 73702 . - . ID=gene-CCO35_RS11040;Name=CCO35_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11040;old_locus_tag=CCO35_11035 NZ_NPME01000003.1 Protein Homology CDS 73469 73702 . - 0 ID=cds-WP_000957775.1;Parent=gene-CCO35_RS11040;Dbxref=GenBank:WP_000957775.1;Name=WP_000957775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461662.1;locus_tag=CCO35_RS11040;product=phage filamentation protein Fil family protein;protein_id=WP_000957775.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 73710 74219 . - . ID=gene-CCO35_RS11045;Name=CCO35_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11045;old_locus_tag=CCO35_11040 NZ_NPME01000003.1 Protein Homology CDS 73710 74219 . - 0 ID=cds-WP_079809624.1;Parent=gene-CCO35_RS11045;Dbxref=GenBank:WP_079809624.1;Name=WP_079809624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461663.1;locus_tag=CCO35_RS11045;product=phage regulatory CII family protein;protein_id=WP_079809624.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 74255 74494 . - . ID=gene-CCO35_RS11050;Name=CCO35_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11050;old_locus_tag=CCO35_11045 NZ_NPME01000003.1 Protein Homology CDS 74255 74494 . - 0 ID=cds-WP_000102104.1;Parent=gene-CCO35_RS11050;Dbxref=GenBank:WP_000102104.1;Name=WP_000102104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461664.1;locus_tag=CCO35_RS11050;product=hypothetical protein;protein_id=WP_000102104.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 74611 75243 . + . ID=gene-CCO35_RS11055;Name=CCO35_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11055;old_locus_tag=CCO35_11050 NZ_NPME01000003.1 Protein Homology CDS 74611 75243 . + 0 ID=cds-WP_000052560.1;Parent=gene-CCO35_RS11055;Dbxref=GenBank:WP_000052560.1;Name=WP_000052560.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461665.1;locus_tag=CCO35_RS11055;product=helix-turn-helix domain-containing protein;protein_id=WP_000052560.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 75247 76272 . + . ID=gene-CCO35_RS11060;Name=CCO35_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11060;old_locus_tag=CCO35_11055 NZ_NPME01000003.1 Protein Homology CDS 75247 76272 . + 0 ID=cds-WP_001536726.1;Parent=gene-CCO35_RS11060;Dbxref=GenBank:WP_001536726.1;Name=WP_001536726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461666.1;locus_tag=CCO35_RS11060;product=site-specific integrase;protein_id=WP_001536726.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 76619 77812 . + . ID=gene-CCO35_RS11065;Name=CCO35_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11065;old_locus_tag=CCO35_11060 NZ_NPME01000003.1 Protein Homology CDS 76619 77812 . + 0 ID=cds-WP_000124725.1;Parent=gene-CCO35_RS11065;Dbxref=GenBank:WP_000124725.1;Name=WP_000124725.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124716.1;locus_tag=CCO35_RS11065;product=integrase domain-containing protein;protein_id=WP_000124725.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 77847 78506 . - . ID=gene-CCO35_RS11070;Name=CCO35_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11070;old_locus_tag=CCO35_11065 NZ_NPME01000003.1 Protein Homology CDS 77847 78506 . - 0 ID=cds-WP_023198740.1;Parent=gene-CCO35_RS11070;Dbxref=GenBank:WP_023198740.1;Name=WP_023198740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343805.1;locus_tag=CCO35_RS11070;product=hypothetical protein;protein_id=WP_023198740.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 78506 79363 . - . ID=gene-CCO35_RS11075;Name=CCO35_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11075;old_locus_tag=CCO35_11070 NZ_NPME01000003.1 Protein Homology CDS 78506 79363 . - 0 ID=cds-WP_001018882.1;Parent=gene-CCO35_RS11075;Dbxref=GenBank:WP_001018882.1;Name=WP_001018882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610101.1;locus_tag=CCO35_RS11075;product=hypothetical protein;protein_id=WP_001018882.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 79711 80277 . - . ID=gene-CCO35_RS11085;Name=CCO35_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11085;old_locus_tag=CCO35_11080 NZ_NPME01000003.1 Protein Homology CDS 79711 80277 . - 0 ID=cds-WP_000210076.1;Parent=gene-CCO35_RS11085;Dbxref=GenBank:WP_000210076.1;Name=WP_000210076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210078.1;locus_tag=CCO35_RS11085;product=phage polarity suppression protein;protein_id=WP_000210076.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 80294 80539 . - . ID=gene-CCO35_RS11090;Name=CCO35_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11090;old_locus_tag=CCO35_11085 NZ_NPME01000003.1 Protein Homology CDS 80294 80539 . - 0 ID=cds-WP_000984203.1;Parent=gene-CCO35_RS11090;Dbxref=GenBank:WP_000984203.1;Name=WP_000984203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000984207.1;locus_tag=CCO35_RS11090;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000984203.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 80536 81273 . - . ID=gene-CCO35_RS11095;Name=CCO35_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11095;old_locus_tag=CCO35_11090 NZ_NPME01000003.1 Protein Homology CDS 80536 81273 . - 0 ID=cds-WP_000149859.1;Parent=gene-CCO35_RS11095;Dbxref=GenBank:WP_000149859.1;Name=WP_000149859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016234818.1;locus_tag=CCO35_RS11095;product=hypothetical protein;protein_id=WP_000149859.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 81821 82087 . + . ID=gene-CCO35_RS11100;Name=CCO35_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11100;old_locus_tag=CCO35_11095 NZ_NPME01000003.1 Protein Homology CDS 81821 82087 . + 0 ID=cds-WP_001750322.1;Parent=gene-CCO35_RS11100;Dbxref=GenBank:WP_001750322.1;Name=WP_001750322.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225306.1;locus_tag=CCO35_RS11100;product=helix-turn-helix transcriptional regulator;protein_id=WP_001750322.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 82084 82686 . + . ID=gene-CCO35_RS11105;Name=CCO35_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11105;old_locus_tag=CCO35_11100 NZ_NPME01000003.1 Protein Homology CDS 82084 82686 . + 0 ID=cds-WP_000986181.1;Parent=gene-CCO35_RS11105;Dbxref=GenBank:WP_000986181.1;Name=WP_000986181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000986182.1;locus_tag=CCO35_RS11105;product=host cell division inhibitor Icd-like protein;protein_id=WP_000986181.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 82676 82975 . + . ID=gene-CCO35_RS11110;Name=CCO35_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11110;old_locus_tag=CCO35_11105 NZ_NPME01000003.1 Protein Homology CDS 82676 82975 . + 0 ID=cds-WP_000556707.1;Parent=gene-CCO35_RS11110;Dbxref=GenBank:WP_000556707.1;Name=WP_000556707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244665.1;locus_tag=CCO35_RS11110;product=hypothetical protein;protein_id=WP_000556707.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 82968 83417 . + . ID=gene-CCO35_RS11115;Name=CCO35_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11115;old_locus_tag=CCO35_11110 NZ_NPME01000003.1 Protein Homology CDS 82968 83417 . + 0 ID=cds-WP_000459283.1;Parent=gene-CCO35_RS11115;Dbxref=GenBank:WP_000459283.1;Name=WP_000459283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016569899.1;locus_tag=CCO35_RS11115;product=hypothetical protein;protein_id=WP_000459283.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 83491 83751 . + . ID=gene-CCO35_RS11120;Name=CCO35_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11120;old_locus_tag=CCO35_11115 NZ_NPME01000003.1 Protein Homology CDS 83491 83751 . + 0 ID=cds-WP_001145746.1;Parent=gene-CCO35_RS11120;Dbxref=GenBank:WP_001145746.1;Name=WP_001145746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151191.1;locus_tag=CCO35_RS11120;product=hypothetical protein;protein_id=WP_001145746.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 83748 84068 . + . ID=gene-CCO35_RS11125;Name=CCO35_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11125;old_locus_tag=CCO35_11120 NZ_NPME01000003.1 Protein Homology CDS 83748 84068 . + 0 ID=cds-WP_000743152.1;Parent=gene-CCO35_RS11125;Dbxref=GenBank:WP_000743152.1;Name=WP_000743152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224852.1;locus_tag=CCO35_RS11125;product=DUF5375 domain-containing protein;protein_id=WP_000743152.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 84083 86416 . + . ID=gene-CCO35_RS11130;Name=CCO35_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11130;old_locus_tag=CCO35_11125 NZ_NPME01000003.1 Protein Homology CDS 84083 86416 . + 0 ID=cds-WP_023198743.1;Parent=gene-CCO35_RS11130;Dbxref=GenBank:WP_023198743.1;Name=WP_023198743.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783702.1;locus_tag=CCO35_RS11130;product=primase-helicase zinc-binding domain-containing protein;protein_id=WP_023198743.1;transl_table=11 NZ_NPME01000003.1 RefSeq pseudogene 86980 87208 . - . ID=gene-CCO35_RS24045;Name=CCO35_RS24045;end_range=87208,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24045;old_locus_tag=CCO35_11130;partial=true;pseudo=true NZ_NPME01000003.1 Protein Homology CDS 86980 87208 . - 0 ID=cds-CCO35_RS24045;Parent=gene-CCO35_RS24045;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=87208,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142400.1;locus_tag=CCO35_RS24045;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_NPME01000003.1 RefSeq gene 87236 87775 . - . ID=gene-CCO35_RS11140;Name=fljA;gbkey=Gene;gene=fljA;gene_biotype=protein_coding;locus_tag=CCO35_RS11140;old_locus_tag=CCO35_11135 NZ_NPME01000003.1 Protein Homology CDS 87236 87775 . - 0 ID=cds-WP_000388998.1;Parent=gene-CCO35_RS11140;Dbxref=GenBank:WP_000388998.1;Name=WP_000388998.1;gbkey=CDS;gene=fljA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461697.1;locus_tag=CCO35_RS11140;product=phase 1 flagellin gene repressor FljA;protein_id=WP_000388998.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 87843 89363 . - . ID=gene-CCO35_RS11145;Name=CCO35_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11145;old_locus_tag=CCO35_11140 NZ_NPME01000003.1 Protein Homology CDS 87843 89363 . - 0 ID=cds-WP_000079792.1;Parent=gene-CCO35_RS11145;Dbxref=GenBank:WP_000079792.1;Name=WP_000079792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=CCO35_RS11145;product=FliC/FljB family flagellin;protein_id=WP_000079792.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 89455 90021 . + . ID=gene-CCO35_RS11150;Name=hin;gbkey=Gene;gene=hin;gene_biotype=protein_coding;locus_tag=CCO35_RS11150;old_locus_tag=CCO35_11145 NZ_NPME01000003.1 Protein Homology CDS 89455 90021 . + 0 ID=cds-WP_000190918.1;Parent=gene-CCO35_RS11150;Dbxref=GenBank:WP_000190918.1;Name=WP_000190918.1;gbkey=CDS;gene=hin;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000190918.1;locus_tag=CCO35_RS11150;product=flagellar phase variation DNA invertase Hin;protein_id=WP_000190918.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 90989 92104 . + . ID=gene-CCO35_RS11160;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=CCO35_RS11160;old_locus_tag=CCO35_11155 NZ_NPME01000003.1 Protein Homology CDS 90989 92104 . + 0 ID=cds-WP_001221111.1;Parent=gene-CCO35_RS11160;Dbxref=GenBank:WP_001221111.1;Name=WP_001221111.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528704.1;locus_tag=CCO35_RS11160;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_001221111.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 92185 95841 . + . ID=gene-CCO35_RS11165;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=CCO35_RS11165;old_locus_tag=CCO35_11160 NZ_NPME01000003.1 Protein Homology CDS 92185 95841 . + 0 ID=cds-WP_080097260.1;Parent=gene-CCO35_RS11165;Dbxref=GenBank:WP_080097260.1;Name=WP_080097260.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=CCO35_RS11165;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_080097260.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 95951 97195 . + . ID=gene-CCO35_RS11170;Name=CCO35_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11170;old_locus_tag=CCO35_11165 NZ_NPME01000003.1 Protein Homology CDS 95951 97195 . + 0 ID=cds-WP_001528721.1;Parent=gene-CCO35_RS11170;Dbxref=GenBank:WP_001528721.1;Name=WP_001528721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=CCO35_RS11170;product=esterase family protein;protein_id=WP_001528721.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 97227 98162 . + . ID=gene-CCO35_RS11175;Name=CCO35_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11175;old_locus_tag=CCO35_11170 NZ_NPME01000003.1 Protein Homology CDS 97227 98162 . + 0 ID=cds-WP_031571333.1;Parent=gene-CCO35_RS11175;Dbxref=GenBank:WP_031571333.1;Name=WP_031571333.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=CCO35_RS11175;product=alpha/beta hydrolase;protein_id=WP_031571333.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 98204 100378 . - . ID=gene-CCO35_RS11180;Name=CCO35_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11180;old_locus_tag=CCO35_11175 NZ_NPME01000003.1 Protein Homology CDS 98204 100378 . - 0 ID=cds-WP_001747679.1;Parent=gene-CCO35_RS11180;Dbxref=GenBank:WP_001747679.1;Name=WP_001747679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=CCO35_RS11180;product=TonB-dependent siderophore receptor;protein_id=WP_001747679.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 100909 101241 . - . ID=gene-CCO35_RS11185;Name=CCO35_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11185;old_locus_tag=CCO35_11180 NZ_NPME01000003.1 Protein Homology CDS 100909 101241 . - 0 ID=cds-WP_077463764.1;Parent=gene-CCO35_RS11185;Dbxref=GenBank:WP_077463764.1;Name=WP_077463764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=CCO35_RS11185;product=hypothetical protein;protein_id=WP_077463764.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 101416 102468 . - . ID=gene-CCO35_RS11190;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=CCO35_RS11190;old_locus_tag=CCO35_11185 NZ_NPME01000003.1 Protein Homology CDS 101416 102468 . - 0 ID=cds-WP_000442272.1;Parent=gene-CCO35_RS11190;Dbxref=GenBank:WP_000442272.1;Name=WP_000442272.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=CCO35_RS11190;product=SPI-2 type III secretion system effector PipB2;protein_id=WP_000442272.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 102987 103916 . + . ID=gene-CCO35_RS11195;Name=CCO35_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11195;old_locus_tag=CCO35_11190 NZ_NPME01000003.1 Protein Homology CDS 102987 103916 . + 0 ID=cds-WP_000178742.1;Parent=gene-CCO35_RS11195;Dbxref=GenBank:WP_000178742.1;Name=WP_000178742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=CCO35_RS11195;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_000178742.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 104210 105106 . + . ID=gene-CCO35_RS11205;Name=CCO35_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11205;old_locus_tag=CCO35_11200 NZ_NPME01000003.1 Protein Homology CDS 104210 105106 . + 0 ID=cds-WP_000701508.1;Parent=gene-CCO35_RS11205;Dbxref=GenBank:WP_000701508.1;Name=WP_000701508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=CCO35_RS11205;product=antimicrobial resistance protein Mig-14;protein_id=WP_000701508.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 105828 106841 . - . ID=gene-CCO35_RS11210;Name=CCO35_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11210;old_locus_tag=CCO35_11205 NZ_NPME01000003.1 Protein Homology CDS 105828 106841 . - 0 ID=cds-WP_001059351.1;Parent=gene-CCO35_RS11210;Dbxref=GenBank:WP_001059351.1;Name=WP_001059351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=CCO35_RS11210;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_001059351.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 106974 108389 . - . ID=gene-CCO35_RS11215;Name=CCO35_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11215;old_locus_tag=CCO35_11210 NZ_NPME01000003.1 Protein Homology CDS 106974 108389 . - 0 ID=cds-WP_000872335.1;Parent=gene-CCO35_RS11215;Dbxref=GenBank:WP_000872335.1;Name=WP_000872335.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=CCO35_RS11215;product=sensor histidine kinase;protein_id=WP_000872335.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 108376 109050 . - . ID=gene-CCO35_RS11220;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=CCO35_RS11220;old_locus_tag=CCO35_11215 NZ_NPME01000003.1 Protein Homology CDS 108376 109050 . - 0 ID=cds-WP_001237934.1;Parent=gene-CCO35_RS11220;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=CCO35_RS11220;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 109205 110182 . + . ID=gene-CCO35_RS11225;Name=CCO35_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11225;old_locus_tag=CCO35_11220 NZ_NPME01000003.1 Protein Homology CDS 109205 110182 . + 0 ID=cds-WP_000744413.1;Parent=gene-CCO35_RS11225;Dbxref=GenBank:WP_000744413.1;Name=WP_000744413.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=CCO35_RS11225;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744413.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 110194 110628 . + . ID=gene-CCO35_RS11230;Name=CCO35_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11230;old_locus_tag=CCO35_11225 NZ_NPME01000003.1 Protein Homology CDS 110194 110628 . + 0 ID=cds-WP_077905333.1;Parent=gene-CCO35_RS11230;Dbxref=GenBank:WP_077905333.1;Name=WP_077905333.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=CCO35_RS11230;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_077905333.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 110639 112153 . + . ID=gene-CCO35_RS11235;Name=CCO35_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11235;old_locus_tag=CCO35_11230 NZ_NPME01000003.1 Protein Homology CDS 110639 112153 . + 0 ID=cds-WP_000382034.1;Parent=gene-CCO35_RS11235;Dbxref=GenBank:WP_000382034.1;Name=WP_000382034.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=CCO35_RS11235;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382034.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 112455 113432 . + . ID=gene-CCO35_RS11240;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=CCO35_RS11240;old_locus_tag=CCO35_11235 NZ_NPME01000003.1 Protein Homology CDS 112455 113432 . + 0 ID=cds-WP_000993100.1;Parent=gene-CCO35_RS11240;Dbxref=GenBank:WP_000993100.1;Name=WP_000993100.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=CCO35_RS11240;product=glutarate dioxygenase GlaH;protein_id=WP_000993100.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 113458 114726 . + . ID=gene-CCO35_RS11245;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=CCO35_RS11245;old_locus_tag=CCO35_11240 NZ_NPME01000003.1 Protein Homology CDS 113458 114726 . + 0 ID=cds-WP_031571315.1;Parent=gene-CCO35_RS11245;Dbxref=GenBank:WP_031571315.1;Name=WP_031571315.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=CCO35_RS11245;product=L-2-hydroxyglutarate oxidase;protein_id=WP_031571315.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 114748 116196 . + . ID=gene-CCO35_RS11250;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=CCO35_RS11250;old_locus_tag=CCO35_11245 NZ_NPME01000003.1 Protein Homology CDS 114748 116196 . + 0 ID=cds-WP_001176532.1;Parent=gene-CCO35_RS11250;Dbxref=GenBank:WP_001176532.1;Name=WP_001176532.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=CCO35_RS11250;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_001176532.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 116211 117494 . + . ID=gene-CCO35_RS11255;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=CCO35_RS11255;old_locus_tag=CCO35_11250 NZ_NPME01000003.1 Protein Homology CDS 116211 117494 . + 0 ID=cds-WP_031571310.1;Parent=gene-CCO35_RS11255;Dbxref=GenBank:WP_031571310.1;Name=WP_031571310.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=CCO35_RS11255;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_031571310.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 117628 119028 . + . ID=gene-CCO35_RS11260;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=CCO35_RS11260;old_locus_tag=CCO35_11255 NZ_NPME01000003.1 Protein Homology CDS 117628 119028 . + 0 ID=cds-WP_000531275.1;Parent=gene-CCO35_RS11260;Dbxref=GenBank:WP_000531275.1;Name=WP_000531275.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=CCO35_RS11260;product=GABA permease;protein_id=WP_000531275.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 119070 119747 . + . ID=gene-CCO35_RS11265;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=CCO35_RS11265;old_locus_tag=CCO35_11260 NZ_NPME01000003.1 Protein Homology CDS 119070 119747 . + 0 ID=cds-WP_000126152.1;Parent=gene-CCO35_RS11265;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=CCO35_RS11265;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 119769 120218 . - . ID=gene-CCO35_RS11270;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=CCO35_RS11270;old_locus_tag=CCO35_11265 NZ_NPME01000003.1 Protein Homology CDS 119769 120218 . - 0 ID=cds-WP_000522406.1;Parent=gene-CCO35_RS11270;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=CCO35_RS11270;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 120318 120476 . - . ID=gene-CCO35_RS11280;Name=CCO35_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11280;old_locus_tag=CCO35_11270 NZ_NPME01000003.1 Protein Homology CDS 120318 120476 . - 0 ID=cds-WP_000508175.1;Parent=gene-CCO35_RS11280;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=CCO35_RS11280;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 120659 120958 . + . ID=gene-CCO35_RS11285;Name=CCO35_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11285;old_locus_tag=CCO35_11275 NZ_NPME01000003.1 Protein Homology CDS 120659 120958 . + 0 ID=cds-WP_094965345.1;Parent=gene-CCO35_RS11285;Dbxref=GenBank:WP_094965345.1;Name=WP_094965345.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=CCO35_RS11285;product=ArsR/SmtB family transcription factor;protein_id=WP_094965345.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 120968 121495 . + . ID=gene-CCO35_RS11290;Name=CCO35_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11290;old_locus_tag=CCO35_11280 NZ_NPME01000003.1 Protein Homology CDS 120968 121495 . + 0 ID=cds-WP_000022011.1;Parent=gene-CCO35_RS11290;Dbxref=GenBank:WP_000022011.1;Name=WP_000022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=CCO35_RS11290;product=rhodanese family protein;protein_id=WP_000022011.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 121574 121753 . + . ID=gene-CCO35_RS11295;Name=CCO35_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11295;old_locus_tag=CCO35_11285 NZ_NPME01000003.1 Protein Homology CDS 121574 121753 . + 0 ID=cds-WP_000494935.1;Parent=gene-CCO35_RS11295;Dbxref=GenBank:WP_000494935.1;Name=WP_000494935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=CCO35_RS11295;product=hypothetical protein;protein_id=WP_000494935.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 121843 122244 . - . ID=gene-CCO35_RS11300;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=CCO35_RS11300;old_locus_tag=CCO35_11290 NZ_NPME01000003.1 Protein Homology CDS 121843 122244 . - 0 ID=cds-WP_001051100.1;Parent=gene-CCO35_RS11300;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=CCO35_RS11300;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 123144 123593 . + . ID=gene-CCO35_RS11320;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=CCO35_RS11320;old_locus_tag=CCO35_11310 NZ_NPME01000003.1 Protein Homology CDS 123144 123593 . + 0 ID=cds-WP_000492669.1;Parent=gene-CCO35_RS11320;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=CCO35_RS11320;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 123628 123978 . - . ID=gene-CCO35_RS11325;Name=CCO35_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11325;old_locus_tag=CCO35_11315 NZ_NPME01000003.1 Protein Homology CDS 123628 123978 . - 0 ID=cds-WP_000281304.1;Parent=gene-CCO35_RS11325;Dbxref=GenBank:WP_000281304.1;Name=WP_000281304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=CCO35_RS11325;product=DUF2002 family protein;protein_id=WP_000281304.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 124140 124466 . + . ID=gene-CCO35_RS11330;Name=CCO35_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11330;old_locus_tag=CCO35_11320 NZ_NPME01000003.1 Protein Homology CDS 124140 124466 . + 0 ID=cds-WP_001519557.1;Parent=gene-CCO35_RS11330;Dbxref=GenBank:WP_001519557.1;Name=WP_001519557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=CCO35_RS11330;product=DUF883 domain-containing protein;protein_id=WP_001519557.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 124550 125884 . - . ID=gene-CCO35_RS11335;Name=CCO35_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11335;old_locus_tag=CCO35_11325 NZ_NPME01000003.1 Protein Homology CDS 124550 125884 . - 0 ID=cds-WP_001138477.1;Parent=gene-CCO35_RS11335;Dbxref=GenBank:WP_001138477.1;Name=WP_001138477.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=CCO35_RS11335;product=PLP-dependent aminotransferase family protein;protein_id=WP_001138477.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 125973 126404 . + . ID=gene-CCO35_RS11340;Name=CCO35_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11340;old_locus_tag=CCO35_11330 NZ_NPME01000003.1 Protein Homology CDS 125973 126404 . + 0 ID=cds-WP_000209816.1;Parent=gene-CCO35_RS11340;Dbxref=GenBank:WP_000209816.1;Name=WP_000209816.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=CCO35_RS11340;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209816.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 126676 126921 . + . ID=gene-CCO35_RS11350;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=CCO35_RS11350;old_locus_tag=CCO35_11340 NZ_NPME01000003.1 Protein Homology CDS 126676 126921 . + 0 ID=cds-WP_000028869.1;Parent=gene-CCO35_RS11350;Dbxref=GenBank:WP_000028869.1;Name=WP_000028869.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=CCO35_RS11350;product=glutaredoxin-like protein NrdH;protein_id=WP_000028869.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 126918 127328 . + . ID=gene-CCO35_RS11355;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CCO35_RS11355;old_locus_tag=CCO35_11345 NZ_NPME01000003.1 Protein Homology CDS 126918 127328 . + 0 ID=cds-WP_001275401.1;Parent=gene-CCO35_RS11355;Dbxref=GenBank:WP_001275401.1;Name=WP_001275401.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=CCO35_RS11355;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275401.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 127301 129445 . + . ID=gene-CCO35_RS11360;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CCO35_RS11360;old_locus_tag=CCO35_11350 NZ_NPME01000003.1 Protein Homology CDS 127301 129445 . + 0 ID=cds-WP_024138323.1;Parent=gene-CCO35_RS11360;Dbxref=GenBank:WP_024138323.1;Name=WP_024138323.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=CCO35_RS11360;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_024138323.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 129456 130415 . + . ID=gene-CCO35_RS11365;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CCO35_RS11365;old_locus_tag=CCO35_11355 NZ_NPME01000003.1 Protein Homology CDS 129456 130415 . + 0 ID=cds-WP_000777903.1;Parent=gene-CCO35_RS11365;Dbxref=GenBank:WP_000777903.1;Name=WP_000777903.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=CCO35_RS11365;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777903.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 130770 131972 . + . ID=gene-CCO35_RS11375;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=CCO35_RS11375;old_locus_tag=CCO35_11365 NZ_NPME01000003.1 Protein Homology CDS 130770 131972 . + 0 ID=cds-WP_000985529.1;Parent=gene-CCO35_RS11375;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=CCO35_RS11375;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 131965 133029 . + . ID=gene-CCO35_RS11380;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=CCO35_RS11380;old_locus_tag=CCO35_11370 NZ_NPME01000003.1 Protein Homology CDS 131965 133029 . + 0 ID=cds-WP_000775021.1;Parent=gene-CCO35_RS11380;Dbxref=GenBank:WP_000775021.1;Name=WP_000775021.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=CCO35_RS11380;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775021.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 133099 134094 . + . ID=gene-CCO35_RS11385;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=CCO35_RS11385;old_locus_tag=CCO35_11375 NZ_NPME01000003.1 Protein Homology CDS 133099 134094 . + 0 ID=cds-WP_001216613.1;Parent=gene-CCO35_RS11385;Dbxref=GenBank:WP_001216613.1;Name=WP_001216613.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=CCO35_RS11385;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216613.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 134259 135443 . + . ID=gene-CCO35_RS11390;Name=CCO35_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11390;old_locus_tag=CCO35_11380 NZ_NPME01000003.1 Protein Homology CDS 134259 135443 . + 0 ID=cds-WP_000165775.1;Parent=gene-CCO35_RS11390;Dbxref=GenBank:WP_000165775.1;Name=WP_000165775.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=CCO35_RS11390;product=MFS transporter;protein_id=WP_000165775.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 135940 136470 . + . ID=gene-CCO35_RS11395;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=CCO35_RS11395;old_locus_tag=CCO35_11385 NZ_NPME01000003.1 Protein Homology CDS 135940 136470 . + 0 ID=cds-WP_000378431.1;Parent=gene-CCO35_RS11395;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=CCO35_RS11395;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 136597 137769 . + . ID=gene-CCO35_RS11400;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=CCO35_RS11400;old_locus_tag=CCO35_11390 NZ_NPME01000003.1 Protein Homology CDS 136597 137769 . + 0 ID=cds-WP_001275603.1;Parent=gene-CCO35_RS11400;Dbxref=GenBank:WP_001275603.1;Name=WP_001275603.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=CCO35_RS11400;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275603.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 137786 139321 . + . ID=gene-CCO35_RS11405;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=CCO35_RS11405;old_locus_tag=CCO35_11395 NZ_NPME01000003.1 Protein Homology CDS 137786 139321 . + 0 ID=cds-WP_023253897.1;Parent=gene-CCO35_RS11405;Dbxref=GenBank:WP_023253897.1;Name=WP_023253897.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=CCO35_RS11405;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_023253897.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 139370 140740 . - . ID=gene-CCO35_RS11410;Name=CCO35_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11410;old_locus_tag=CCO35_11400 NZ_NPME01000003.1 Protein Homology CDS 139370 140740 . - 0 ID=cds-WP_000645132.1;Parent=gene-CCO35_RS11410;Dbxref=GenBank:WP_000645132.1;Name=WP_000645132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=CCO35_RS11410;product=carbohydrate porin;protein_id=WP_000645132.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 141086 141601 . - . ID=gene-CCO35_RS11415;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=CCO35_RS11415;old_locus_tag=CCO35_11405 NZ_NPME01000003.1 Protein Homology CDS 141086 141601 . - 0 ID=cds-WP_001130194.1;Parent=gene-CCO35_RS11415;Dbxref=GenBank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=CCO35_RS11415;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 141751 143307 . - . ID=gene-CCO35_RS11420;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=CCO35_RS11420;old_locus_tag=CCO35_11410 NZ_NPME01000003.1 Protein Homology CDS 141751 143307 . - 0 ID=cds-WP_000611821.1;Parent=gene-CCO35_RS11420;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=CCO35_RS11420;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 143384 143809 . - . ID=gene-CCO35_RS11425;Name=CCO35_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11425;old_locus_tag=CCO35_11415 NZ_NPME01000003.1 Protein Homology CDS 143384 143809 . - 0 ID=cds-WP_001279499.1;Parent=gene-CCO35_RS11425;Dbxref=GenBank:WP_001279499.1;Name=WP_001279499.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=CCO35_RS11425;product=YqaA family protein;protein_id=WP_001279499.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 143806 144372 . - . ID=gene-CCO35_RS11430;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=CCO35_RS11430;old_locus_tag=CCO35_11420 NZ_NPME01000003.1 Protein Homology CDS 143806 144372 . - 0 ID=cds-WP_000271288.1;Parent=gene-CCO35_RS11430;Dbxref=GenBank:WP_000271288.1;Name=WP_000271288.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=CCO35_RS11430;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271288.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 144622 144698 . - . ID=gene-CCO35_RS11435;Name=CCO35_RS11435;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS11435;old_locus_tag=CCO35_11425 NZ_NPME01000003.1 tRNAscan-SE tRNA 144622 144698 . - . ID=rna-CCO35_RS11435;Parent=gene-CCO35_RS11435;anticodon=(pos:complement(144662..144664));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS11435;product=tRNA-Arg NZ_NPME01000003.1 tRNAscan-SE exon 144622 144698 . - . ID=exon-CCO35_RS11435-1;Parent=rna-CCO35_RS11435;anticodon=(pos:complement(144662..144664));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS11435;product=tRNA-Arg NZ_NPME01000003.1 RefSeq gene 144892 144968 . - . ID=gene-CCO35_RS11440;Name=CCO35_RS11440;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS11440;old_locus_tag=CCO35_11430 NZ_NPME01000003.1 tRNAscan-SE tRNA 144892 144968 . - . ID=rna-CCO35_RS11440;Parent=gene-CCO35_RS11440;anticodon=(pos:complement(144932..144934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS11440;product=tRNA-Arg NZ_NPME01000003.1 tRNAscan-SE exon 144892 144968 . - . ID=exon-CCO35_RS11440-1;Parent=rna-CCO35_RS11440;anticodon=(pos:complement(144932..144934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS11440;product=tRNA-Arg NZ_NPME01000003.1 RefSeq gene 144972 145064 . - . ID=gene-CCO35_RS11445;Name=CCO35_RS11445;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS11445;old_locus_tag=CCO35_11435 NZ_NPME01000003.1 tRNAscan-SE tRNA 144972 145064 . - . ID=rna-CCO35_RS11445;Parent=gene-CCO35_RS11445;anticodon=(pos:complement(145028..145030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS11445;product=tRNA-Ser NZ_NPME01000003.1 tRNAscan-SE exon 144972 145064 . - . ID=exon-CCO35_RS11445-1;Parent=rna-CCO35_RS11445;anticodon=(pos:complement(145028..145030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS11445;product=tRNA-Ser NZ_NPME01000003.1 RefSeq gene 145368 145553 . - . ID=gene-CCO35_RS11455;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=CCO35_RS11455;old_locus_tag=CCO35_11445 NZ_NPME01000003.1 Protein Homology CDS 145368 145553 . - 0 ID=cds-WP_000906486.1;Parent=gene-CCO35_RS11455;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=CCO35_RS11455;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 145788 148418 . - . ID=gene-CCO35_RS11460;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CCO35_RS11460;old_locus_tag=CCO35_11450 NZ_NPME01000003.1 Protein Homology CDS 145788 148418 . - 0 ID=cds-WP_000047228.1;Parent=gene-CCO35_RS11460;Dbxref=GenBank:WP_000047228.1;Name=WP_000047228.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=CCO35_RS11460;product=alanine--tRNA ligase;protein_id=WP_000047228.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 148654 149154 . - . ID=gene-CCO35_RS11470;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CCO35_RS11470;old_locus_tag=CCO35_11460 NZ_NPME01000003.1 Protein Homology CDS 148654 149154 . - 0 ID=cds-WP_001294867.1;Parent=gene-CCO35_RS11470;Dbxref=GenBank:WP_001294867.1;Name=WP_001294867.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=CCO35_RS11470;product=recombination regulator RecX;protein_id=WP_001294867.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 149271 150332 . - . ID=gene-CCO35_RS11475;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CCO35_RS11475;old_locus_tag=CCO35_11465 NZ_NPME01000003.1 Protein Homology CDS 149271 150332 . - 0 ID=cds-WP_000963150.1;Parent=gene-CCO35_RS11475;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=CCO35_RS11475;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 150417 150914 . - . ID=gene-CCO35_RS11480;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=CCO35_RS11480;old_locus_tag=CCO35_11470 NZ_NPME01000003.1 Protein Homology CDS 150417 150914 . - 0 ID=cds-WP_000132239.1;Parent=gene-CCO35_RS11480;Dbxref=GenBank:WP_000132239.1;Name=WP_000132239.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=CCO35_RS11480;product=nicotinamide-nucleotide amidase;protein_id=WP_000132239.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 151109 151354 . + . ID=gene-CCO35_RS24050;Name=CCO35_RS24050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24050;old_locus_tag=CCO35_11475 NZ_NPME01000003.1 Protein Homology CDS 151109 151354 . + 0 ID=cds-WP_001519391.1;Parent=gene-CCO35_RS24050;Dbxref=GenBank:WP_001519391.1;Name=WP_001519391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=CCO35_RS24050;product=hypothetical protein;protein_id=WP_001519391.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 151392 152471 . - . ID=gene-CCO35_RS11490;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=CCO35_RS11490;old_locus_tag=CCO35_11480 NZ_NPME01000003.1 Protein Homology CDS 151392 152471 . - 0 ID=cds-WP_000476811.1;Parent=gene-CCO35_RS11490;Dbxref=GenBank:WP_000476811.1;Name=WP_000476811.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=CCO35_RS11490;product=lytic murein transglycosylase B;protein_id=WP_000476811.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 152725 153288 . + . ID=gene-CCO35_RS11495;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=CCO35_RS11495;old_locus_tag=CCO35_11485 NZ_NPME01000003.1 Protein Homology CDS 152725 153288 . + 0 ID=cds-WP_000573333.1;Parent=gene-CCO35_RS11495;Dbxref=GenBank:WP_000573333.1;Name=WP_000573333.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=CCO35_RS11495;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573333.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 153285 154256 . + . ID=gene-CCO35_RS11500;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=CCO35_RS11500;old_locus_tag=CCO35_11490 NZ_NPME01000003.1 Protein Homology CDS 153285 154256 . + 0 ID=cds-WP_000199042.1;Parent=gene-CCO35_RS11500;Dbxref=GenBank:WP_000199042.1;Name=WP_000199042.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=CCO35_RS11500;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199042.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 154268 154630 . + . ID=gene-CCO35_RS11505;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=CCO35_RS11505;old_locus_tag=CCO35_11495 NZ_NPME01000003.1 Protein Homology CDS 154268 154630 . + 0 ID=cds-WP_000111553.1;Parent=gene-CCO35_RS11505;Dbxref=GenBank:WP_000111553.1;Name=WP_000111553.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=CCO35_RS11505;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111553.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 154642 155421 . + . ID=gene-CCO35_RS11510;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=CCO35_RS11510;old_locus_tag=CCO35_11500 NZ_NPME01000003.1 Protein Homology CDS 154642 155421 . + 0 ID=cds-WP_001077368.1;Parent=gene-CCO35_RS11510;Dbxref=GenBank:WP_001077368.1;Name=WP_001077368.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=CCO35_RS11510;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077368.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 155498 155857 . + . ID=gene-CCO35_RS11515;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=CCO35_RS11515;old_locus_tag=CCO35_11505 NZ_NPME01000003.1 Protein Homology CDS 155498 155857 . + 0 ID=cds-WP_000255198.1;Parent=gene-CCO35_RS11515;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=CCO35_RS11515;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 156055 156828 . + . ID=gene-CCO35_RS11520;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=CCO35_RS11520;old_locus_tag=CCO35_11510 NZ_NPME01000003.1 Protein Homology CDS 156055 156828 . + 0 ID=cds-WP_000804536.1;Parent=gene-CCO35_RS11520;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=CCO35_RS11520;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 156821 157786 . + . ID=gene-CCO35_RS11525;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=CCO35_RS11525;old_locus_tag=CCO35_11515 NZ_NPME01000003.1 Protein Homology CDS 156821 157786 . + 0 ID=cds-WP_001278204.1;Parent=gene-CCO35_RS11525;Dbxref=GenBank:WP_001278204.1;Name=WP_001278204.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=CCO35_RS11525;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278204.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 157783 159303 . - . ID=gene-CCO35_RS11530;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=CCO35_RS11530;old_locus_tag=CCO35_11520 NZ_NPME01000003.1 Protein Homology CDS 157783 159303 . - 0 ID=cds-WP_000010808.1;Parent=gene-CCO35_RS11530;Dbxref=GenBank:WP_000010808.1;Name=WP_000010808.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=CCO35_RS11530;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010808.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 159489 160928 . + . ID=gene-CCO35_RS11535;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=CCO35_RS11535;old_locus_tag=CCO35_11525 NZ_NPME01000003.1 Protein Homology CDS 159489 160928 . + 0 ID=cds-WP_031569444.1;Parent=gene-CCO35_RS11535;Dbxref=GenBank:WP_031569444.1;Name=WP_031569444.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=CCO35_RS11535;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_031569444.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 160925 162058 . + . ID=gene-CCO35_RS11540;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=CCO35_RS11540;old_locus_tag=CCO35_11530 NZ_NPME01000003.1 Protein Homology CDS 160925 162058 . + 0 ID=cds-WP_031569447.1;Parent=gene-CCO35_RS11540;Dbxref=GenBank:WP_031569447.1;Name=WP_031569447.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=CCO35_RS11540;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_031569447.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 162155 164395 . - . ID=gene-CCO35_RS11545;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=CCO35_RS11545;old_locus_tag=CCO35_11535 NZ_NPME01000003.1 Protein Homology CDS 162155 164395 . - 0 ID=cds-WP_031569450.1;Parent=gene-CCO35_RS11545;Dbxref=GenBank:WP_031569450.1;Name=WP_031569450.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=CCO35_RS11545;product=carbamoyltransferase HypF;protein_id=WP_031569450.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 164541 165086 . - . ID=gene-CCO35_RS11550;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=CCO35_RS11550;old_locus_tag=CCO35_11540 NZ_NPME01000003.1 Protein Homology CDS 164541 165086 . - 0 ID=cds-WP_001078791.1;Parent=gene-CCO35_RS11550;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=CCO35_RS11550;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 165287 166066 . - . ID=gene-CCO35_RS11555;Name=CCO35_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11555;old_locus_tag=CCO35_11545 NZ_NPME01000003.1 Protein Homology CDS 165287 166066 . - 0 ID=cds-WP_000692485.1;Parent=gene-CCO35_RS11555;Dbxref=GenBank:WP_000692485.1;Name=WP_000692485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989221.1;locus_tag=CCO35_RS11555;product=hypothetical protein;protein_id=WP_000692485.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 166123 166593 . - . ID=gene-CCO35_RS11560;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=CCO35_RS11560;old_locus_tag=CCO35_11550 NZ_NPME01000003.1 Protein Homology CDS 166123 166593 . - 0 ID=cds-WP_000132993.1;Parent=gene-CCO35_RS11560;Dbxref=GenBank:WP_000132993.1;Name=WP_000132993.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=CCO35_RS11560;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132993.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 166586 166996 . - . ID=gene-CCO35_RS11565;Name=CCO35_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11565;old_locus_tag=CCO35_11555 NZ_NPME01000003.1 Protein Homology CDS 166586 166996 . - 0 ID=cds-WP_000003725.1;Parent=gene-CCO35_RS11565;Dbxref=GenBank:WP_000003725.1;Name=WP_000003725.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=CCO35_RS11565;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003725.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 166993 167760 . - . ID=gene-CCO35_RS11570;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=CCO35_RS11570;old_locus_tag=CCO35_11560 NZ_NPME01000003.1 Protein Homology CDS 166993 167760 . - 0 ID=cds-WP_000067422.1;Parent=gene-CCO35_RS11570;Dbxref=GenBank:WP_000067422.1;Name=WP_000067422.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=CCO35_RS11570;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067422.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 167760 168302 . - . ID=gene-CCO35_RS11575;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=CCO35_RS11575;old_locus_tag=CCO35_11565 NZ_NPME01000003.1 Protein Homology CDS 167760 168302 . - 0 ID=cds-WP_000493767.1;Parent=gene-CCO35_RS11575;Dbxref=GenBank:WP_000493767.1;Name=WP_000493767.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=CCO35_RS11575;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493767.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 168312 170021 . - . ID=gene-CCO35_RS11580;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=CCO35_RS11580;old_locus_tag=CCO35_11570 NZ_NPME01000003.1 Protein Homology CDS 168312 170021 . - 0 ID=cds-WP_001288155.1;Parent=gene-CCO35_RS11580;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=CCO35_RS11580;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 170039 170962 . - . ID=gene-CCO35_RS11585;Name=CCO35_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11585;old_locus_tag=CCO35_11575 NZ_NPME01000003.1 Protein Homology CDS 170039 170962 . - 0 ID=cds-WP_000110563.1;Parent=gene-CCO35_RS11585;Dbxref=GenBank:WP_000110563.1;Name=WP_000110563.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=CCO35_RS11585;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110563.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 170965 172791 . - . ID=gene-CCO35_RS11590;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=CCO35_RS11590;old_locus_tag=CCO35_11580 NZ_NPME01000003.1 Protein Homology CDS 170965 172791 . - 0 ID=cds-WP_000097041.1;Parent=gene-CCO35_RS11590;Dbxref=GenBank:WP_000097041.1;Name=WP_000097041.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=CCO35_RS11590;product=formate hydrogenlyase subunit 3;protein_id=WP_000097041.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 172791 173399 . - . ID=gene-CCO35_RS11595;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=CCO35_RS11595;old_locus_tag=CCO35_11585 NZ_NPME01000003.1 Protein Homology CDS 172791 173399 . - 0 ID=cds-WP_001079164.1;Parent=gene-CCO35_RS11595;Dbxref=GenBank:WP_001079164.1;Name=WP_001079164.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=CCO35_RS11595;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079164.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 173545 174006 . - . ID=gene-CCO35_RS11600;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=CCO35_RS11600;old_locus_tag=CCO35_11590 NZ_NPME01000003.1 Protein Homology CDS 173545 174006 . - 0 ID=cds-WP_000158075.1;Parent=gene-CCO35_RS11600;Dbxref=GenBank:WP_000158075.1;Name=WP_000158075.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=CCO35_RS11600;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158075.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 174216 174572 . + . ID=gene-CCO35_RS11610;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO35_RS11610;old_locus_tag=CCO35_11600 NZ_NPME01000003.1 Protein Homology CDS 174216 174572 . + 0 ID=cds-WP_000544461.1;Parent=gene-CCO35_RS11610;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=CCO35_RS11610;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 174641 175513 . + . ID=gene-CCO35_RS11615;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=CCO35_RS11615;old_locus_tag=CCO35_11605 NZ_NPME01000003.1 Protein Homology CDS 174641 175513 . + 0 ID=cds-WP_000337631.1;Parent=gene-CCO35_RS11615;Dbxref=GenBank:WP_000337631.1;Name=WP_000337631.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=CCO35_RS11615;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337631.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 175504 175776 . + . ID=gene-CCO35_RS11620;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO35_RS11620;old_locus_tag=CCO35_11610 NZ_NPME01000003.1 Protein Homology CDS 175504 175776 . + 0 ID=cds-WP_000334871.1;Parent=gene-CCO35_RS11620;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=CCO35_RS11620;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 175776 176897 . + . ID=gene-CCO35_RS11625;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=CCO35_RS11625;old_locus_tag=CCO35_11615 NZ_NPME01000003.1 Protein Homology CDS 175776 176897 . + 0 ID=cds-WP_001212962.1;Parent=gene-CCO35_RS11625;Dbxref=GenBank:WP_001212962.1;Name=WP_001212962.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=CCO35_RS11625;product=hydrogenase formation protein HypD;protein_id=WP_001212962.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 176894 177904 . + . ID=gene-CCO35_RS11630;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=CCO35_RS11630;old_locus_tag=CCO35_11620 NZ_NPME01000003.1 Protein Homology CDS 176894 177904 . + 0 ID=cds-WP_001059950.1;Parent=gene-CCO35_RS11630;Dbxref=GenBank:WP_001059950.1;Name=WP_001059950.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=CCO35_RS11630;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059950.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 178123 180201 . + . ID=gene-CCO35_RS11635;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO35_RS11635;old_locus_tag=CCO35_11625 NZ_NPME01000003.1 Protein Homology CDS 178123 180201 . + 0 ID=cds-WP_000122692.1;Parent=gene-CCO35_RS11635;Dbxref=GenBank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=CCO35_RS11635;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 180263 180607 . - . ID=gene-CCO35_RS11640;Name=CCO35_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11640;old_locus_tag=CCO35_11630 NZ_NPME01000003.1 Protein Homology CDS 180263 180607 . - 0 ID=cds-WP_001117938.1;Parent=gene-CCO35_RS11640;Dbxref=GenBank:WP_001117938.1;Name=WP_001117938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=CCO35_RS11640;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117938.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 180789 181706 . + . ID=gene-CCO35_RS11645;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=CCO35_RS11645;old_locus_tag=CCO35_11635 NZ_NPME01000003.1 Protein Homology CDS 180789 181706 . + 0 ID=cds-WP_000182930.1;Parent=gene-CCO35_RS11645;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=CCO35_RS11645;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 181703 182524 . + . ID=gene-CCO35_RS11650;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=CCO35_RS11650;old_locus_tag=CCO35_11640 NZ_NPME01000003.1 Protein Homology CDS 181703 182524 . + 0 ID=cds-WP_000076058.1;Parent=gene-CCO35_RS11650;Dbxref=GenBank:WP_000076058.1;Name=WP_000076058.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=CCO35_RS11650;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000076058.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 182521 183381 . + . ID=gene-CCO35_RS11655;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=CCO35_RS11655;old_locus_tag=CCO35_11645 NZ_NPME01000003.1 Protein Homology CDS 182521 183381 . + 0 ID=cds-WP_001104336.1;Parent=gene-CCO35_RS11655;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=CCO35_RS11655;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 183372 184220 . + . ID=gene-CCO35_RS11660;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=CCO35_RS11660;old_locus_tag=CCO35_11650 NZ_NPME01000003.1 Protein Homology CDS 183372 184220 . + 0 ID=cds-WP_000480209.1;Parent=gene-CCO35_RS11660;Dbxref=GenBank:WP_000480209.1;Name=WP_000480209.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=CCO35_RS11660;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480209.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 184319 185227 . - . ID=gene-CCO35_RS11665;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=CCO35_RS11665;old_locus_tag=CCO35_11655 NZ_NPME01000003.1 Protein Homology CDS 184319 185227 . - 0 ID=cds-WP_079963666.1;Parent=gene-CCO35_RS11665;Dbxref=GenBank:WP_079963666.1;Name=WP_079963666.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=CCO35_RS11665;product=type III secretion system YopJ family effector AvrA;protein_id=WP_079963666.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 185388 186143 . - . ID=gene-CCO35_RS11670;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=CCO35_RS11670;old_locus_tag=CCO35_11660 NZ_NPME01000003.1 Protein Homology CDS 185388 186143 . - 0 ID=cds-WP_001246661.1;Parent=gene-CCO35_RS11670;Dbxref=GenBank:WP_001246661.1;Name=WP_001246661.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=CCO35_RS11670;product=transcriptional regulator SprB;protein_id=WP_001246661.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 186528 187415 . - . ID=gene-CCO35_RS11680;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=CCO35_RS11680;old_locus_tag=CCO35_11670 NZ_NPME01000003.1 Protein Homology CDS 186528 187415 . - 0 ID=cds-WP_094965346.1;Parent=gene-CCO35_RS11680;Dbxref=GenBank:WP_094965346.1;Name=WP_094965346.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=CCO35_RS11680;product=invasion transcriptional regulator HilC;protein_id=WP_094965346.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 187761 188213 . - . ID=gene-CCO35_RS11685;Name=CCO35_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11685;old_locus_tag=CCO35_11675 NZ_NPME01000003.1 Protein Homology CDS 187761 188213 . - 0 ID=cds-WP_000612176.1;Parent=gene-CCO35_RS11685;Dbxref=GenBank:WP_000612176.1;Name=WP_000612176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=CCO35_RS11685;product=type III secretion system effector protein OrgC;protein_id=WP_000612176.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 188229 188900 . - . ID=gene-CCO35_RS11690;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=CCO35_RS11690;old_locus_tag=CCO35_11680 NZ_NPME01000003.1 Protein Homology CDS 188229 188900 . - 0 ID=cds-WP_000916655.1;Parent=gene-CCO35_RS11690;Dbxref=GenBank:WP_000916655.1;Name=WP_000916655.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835247.1;locus_tag=CCO35_RS11690;product=type III secretion system linker protein OrgB;protein_id=WP_000916655.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 188857 189456 . - . ID=gene-CCO35_RS11695;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=CCO35_RS11695;old_locus_tag=CCO35_11685 NZ_NPME01000003.1 Protein Homology CDS 188857 189456 . - 0 ID=cds-WP_077916024.1;Parent=gene-CCO35_RS11695;Dbxref=GenBank:WP_077916024.1;Name=WP_077916024.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=CCO35_RS11695;product=oxygen-regulated invasion protein OrgA;protein_id=WP_077916024.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 189428 190186 . - . ID=gene-CCO35_RS11700;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=CCO35_RS11700;old_locus_tag=CCO35_11690 NZ_NPME01000003.1 Protein Homology CDS 189428 190186 . - 0 ID=cds-WP_000621240.1;Parent=gene-CCO35_RS11700;Dbxref=GenBank:WP_000621240.1;Name=WP_000621240.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=CCO35_RS11700;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621240.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 190183 190488 . - . ID=gene-CCO35_RS11705;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=CCO35_RS11705;old_locus_tag=CCO35_11695 NZ_NPME01000003.1 Protein Homology CDS 190183 190488 . - 0 ID=cds-WP_000020431.1;Parent=gene-CCO35_RS11705;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=CCO35_RS11705;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 190507 190749 . - . ID=gene-CCO35_RS11710;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=CCO35_RS11710;old_locus_tag=CCO35_11700 NZ_NPME01000003.1 Protein Homology CDS 190507 190749 . - 0 ID=cds-WP_001143113.1;Parent=gene-CCO35_RS11710;Dbxref=GenBank:WP_001143113.1;Name=WP_001143113.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=CCO35_RS11710;product=type III secretion system needle filament protein PrgI;protein_id=WP_001143113.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 190774 191952 . - . ID=gene-CCO35_RS11715;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=CCO35_RS11715;old_locus_tag=CCO35_11705 NZ_NPME01000003.1 Protein Homology CDS 190774 191952 . - 0 ID=cds-WP_000450196.1;Parent=gene-CCO35_RS11715;Dbxref=GenBank:WP_000450196.1;Name=WP_000450196.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=CCO35_RS11715;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_000450196.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 192268 193197 . + . ID=gene-CCO35_RS11720;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=CCO35_RS11720;old_locus_tag=CCO35_11710 NZ_NPME01000003.1 Protein Homology CDS 192268 193197 . + 0 ID=cds-WP_000432699.1;Parent=gene-CCO35_RS11720;Dbxref=GenBank:WP_000432699.1;Name=WP_000432699.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=CCO35_RS11720;product=transcriptional regulator HilD;protein_id=WP_000432699.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 194287 195948 . + . ID=gene-CCO35_RS11725;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=CCO35_RS11725;old_locus_tag=CCO35_11715 NZ_NPME01000003.1 Protein Homology CDS 194287 195948 . + 0 ID=cds-WP_001120090.1;Parent=gene-CCO35_RS11725;Dbxref=GenBank:WP_001120090.1;Name=WP_001120090.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=CCO35_RS11725;product=transcriptional regulator HilA;protein_id=WP_001120090.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 195966 196448 . + . ID=gene-CCO35_RS11730;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=CCO35_RS11730;old_locus_tag=CCO35_11720 NZ_NPME01000003.1 Protein Homology CDS 195966 196448 . + 0 ID=cds-WP_000558932.1;Parent=gene-CCO35_RS11730;Dbxref=GenBank:WP_000558932.1;Name=WP_000558932.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=CCO35_RS11730;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558932.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 196502 198133 . - . ID=gene-CCO35_RS11735;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=CCO35_RS11735;old_locus_tag=CCO35_11725 NZ_NPME01000003.1 Protein Homology CDS 196502 198133 . - 0 ID=cds-WP_023252091.1;Parent=gene-CCO35_RS11735;Dbxref=GenBank:WP_023252091.1;Name=WP_023252091.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=CCO35_RS11735;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_023252091.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 198120 198512 . - . ID=gene-CCO35_RS11740;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=CCO35_RS11740;old_locus_tag=CCO35_11730 NZ_NPME01000003.1 Protein Homology CDS 198120 198512 . - 0 ID=cds-WP_001147854.1;Parent=gene-CCO35_RS11740;Dbxref=GenBank:WP_001147854.1;Name=WP_001147854.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=CCO35_RS11740;product=chaperone SicP;protein_id=WP_001147854.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 198539 198799 . - . ID=gene-CCO35_RS11745;Name=CCO35_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11745;old_locus_tag=CCO35_11735 NZ_NPME01000003.1 Protein Homology CDS 198539 198799 . - 0 ID=cds-WP_000692251.1;Parent=gene-CCO35_RS11745;Dbxref=GenBank:WP_000692251.1;Name=WP_000692251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=CCO35_RS11745;product=hypothetical protein;protein_id=WP_000692251.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 198843 199091 . - . ID=gene-CCO35_RS11750;Name=CCO35_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11750;old_locus_tag=CCO35_11740 NZ_NPME01000003.1 Protein Homology CDS 198843 199091 . - 0 ID=cds-WP_001055579.1;Parent=gene-CCO35_RS11750;Dbxref=GenBank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=CCO35_RS11750;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 199110 201167 . - . ID=gene-CCO35_RS11755;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=CCO35_RS11755;old_locus_tag=CCO35_11745 NZ_NPME01000003.1 Protein Homology CDS 199110 201167 . - 0 ID=cds-WP_031569542.1;Parent=gene-CCO35_RS11755;Dbxref=GenBank:WP_031569542.1;Name=WP_031569542.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=CCO35_RS11755;product=SPI-1 type III secretion system effector SipA;protein_id=WP_031569542.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 201186 202208 . - . ID=gene-CCO35_RS11760;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=CCO35_RS11760;old_locus_tag=CCO35_11750 NZ_NPME01000003.1 Protein Homology CDS 201186 202208 . - 0 ID=cds-WP_000932250.1;Parent=gene-CCO35_RS11760;Dbxref=GenBank:WP_000932250.1;Name=WP_000932250.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=CCO35_RS11760;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_000932250.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 202279 203508 . - . ID=gene-CCO35_RS11765;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=CCO35_RS11765;old_locus_tag=CCO35_11755 NZ_NPME01000003.1 Protein Homology CDS 202279 203508 . - 0 ID=cds-WP_000909019.1;Parent=gene-CCO35_RS11765;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=CCO35_RS11765;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 203536 205317 . - . ID=gene-CCO35_RS11770;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=CCO35_RS11770;old_locus_tag=CCO35_11760 NZ_NPME01000003.1 Protein Homology CDS 203536 205317 . - 0 ID=cds-WP_000245782.1;Parent=gene-CCO35_RS11770;Dbxref=GenBank:WP_000245782.1;Name=WP_000245782.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=CCO35_RS11770;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245782.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 205320 205817 . - . ID=gene-CCO35_RS11775;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=CCO35_RS11775;old_locus_tag=CCO35_11765 NZ_NPME01000003.1 Protein Homology CDS 205320 205817 . - 0 ID=cds-WP_000386309.1;Parent=gene-CCO35_RS11775;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=CCO35_RS11775;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 205955 207025 . - . ID=gene-CCO35_RS11780;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=CCO35_RS11780;old_locus_tag=CCO35_11770 NZ_NPME01000003.1 Protein Homology CDS 205955 207025 . - 0 ID=cds-WP_000097719.1;Parent=gene-CCO35_RS11780;Dbxref=GenBank:WP_000097719.1;Name=WP_000097719.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=CCO35_RS11780;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097719.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 207012 207803 . - . ID=gene-CCO35_RS11785;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=CCO35_RS11785;old_locus_tag=CCO35_11775 NZ_NPME01000003.1 Protein Homology CDS 207012 207803 . - 0 ID=cds-WP_023214354.1;Parent=gene-CCO35_RS11785;Dbxref=GenBank:WP_023214354.1;Name=WP_023214354.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=CCO35_RS11785;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_023214354.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 207807 208067 . - . ID=gene-CCO35_RS11790;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=CCO35_RS11790;old_locus_tag=CCO35_11780 NZ_NPME01000003.1 Protein Homology CDS 207807 208067 . - 0 ID=cds-WP_000342503.1;Parent=gene-CCO35_RS11790;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=CCO35_RS11790;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 208093 208767 . - . ID=gene-CCO35_RS11795;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=CCO35_RS11795;old_locus_tag=CCO35_11785 NZ_NPME01000003.1 Protein Homology CDS 208093 208767 . - 0 ID=cds-WP_000526016.1;Parent=gene-CCO35_RS11795;Dbxref=GenBank:WP_000526016.1;Name=WP_000526016.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=CCO35_RS11795;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526016.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 208757 209668 . - . ID=gene-CCO35_RS11800;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=CCO35_RS11800;old_locus_tag=CCO35_11790 NZ_NPME01000003.1 Protein Homology CDS 208757 209668 . - 0 ID=cds-WP_000058727.1;Parent=gene-CCO35_RS11800;Dbxref=GenBank:WP_000058727.1;Name=WP_000058727.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=CCO35_RS11800;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058727.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 209668 210678 . - . ID=gene-CCO35_RS11805;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=CCO35_RS11805;old_locus_tag=CCO35_11795 NZ_NPME01000003.1 Protein Homology CDS 209668 210678 . - 0 ID=cds-WP_000503095.1;Parent=gene-CCO35_RS11805;Dbxref=GenBank:WP_000503095.1;Name=WP_000503095.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=CCO35_RS11805;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_000503095.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 210678 211121 . - . ID=gene-CCO35_RS11810;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=CCO35_RS11810;old_locus_tag=CCO35_11800 NZ_NPME01000003.1 Protein Homology CDS 210678 211121 . - 0 ID=cds-WP_000555884.1;Parent=gene-CCO35_RS11810;Dbxref=GenBank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=CCO35_RS11810;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 211099 212394 . - . ID=gene-CCO35_RS11815;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=CCO35_RS11815;old_locus_tag=CCO35_11805 NZ_NPME01000003.1 Protein Homology CDS 211099 212394 . - 0 ID=cds-WP_000856766.1;Parent=gene-CCO35_RS11815;Dbxref=GenBank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=CCO35_RS11815;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 212391 212798 . - . ID=gene-CCO35_RS11820;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=CCO35_RS11820;old_locus_tag=CCO35_11810 NZ_NPME01000003.1 Protein Homology CDS 212391 212798 . - 0 ID=cds-WP_001164070.1;Parent=gene-CCO35_RS11820;Dbxref=GenBank:WP_001164070.1;Name=WP_001164070.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=CCO35_RS11820;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164070.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 212822 214879 . - . ID=gene-CCO35_RS11825;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=CCO35_RS11825;old_locus_tag=CCO35_11815 NZ_NPME01000003.1 Protein Homology CDS 212822 214879 . - 0 ID=cds-WP_000927219.1;Parent=gene-CCO35_RS11825;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=CCO35_RS11825;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 214904 216022 . - . ID=gene-CCO35_RS11830;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=CCO35_RS11830;old_locus_tag=CCO35_11820 NZ_NPME01000003.1 Protein Homology CDS 214904 216022 . - 0 ID=cds-WP_000612171.1;Parent=gene-CCO35_RS11830;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=CCO35_RS11830;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 216019 217707 . - . ID=gene-CCO35_RS11835;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=CCO35_RS11835;old_locus_tag=CCO35_11825 NZ_NPME01000003.1 Protein Homology CDS 216019 217707 . - 0 ID=cds-WP_000848099.1;Parent=gene-CCO35_RS11835;Dbxref=GenBank:WP_000848099.1;Name=WP_000848099.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=CCO35_RS11835;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848099.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 217704 218354 . - . ID=gene-CCO35_RS11840;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=CCO35_RS11840;old_locus_tag=CCO35_11830 NZ_NPME01000003.1 Protein Homology CDS 217704 218354 . - 0 ID=cds-WP_077916025.1;Parent=gene-CCO35_RS11840;Dbxref=GenBank:WP_077916025.1;Name=WP_077916025.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=CCO35_RS11840;product=type III secretion system transcriptional activator InvF;protein_id=WP_077916025.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 218811 219254 . + . ID=gene-CCO35_RS11845;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=CCO35_RS11845;old_locus_tag=CCO35_11835 NZ_NPME01000003.1 Protein Homology CDS 218811 219254 . + 0 ID=cds-WP_023136972.1;Parent=gene-CCO35_RS11845;Dbxref=GenBank:WP_023136972.1;Name=WP_023136972.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=CCO35_RS11845;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_023136972.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 219684 220133 . + . ID=gene-CCO35_RS11855;Name=CCO35_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11855;old_locus_tag=CCO35_11845 NZ_NPME01000003.1 Protein Homology CDS 219684 220133 . + 0 ID=cds-WP_000381614.1;Parent=gene-CCO35_RS11855;Dbxref=GenBank:WP_000381614.1;Name=WP_000381614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=CCO35_RS11855;product=STM2901 family protein;protein_id=WP_000381614.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 220118 220465 . + . ID=gene-CCO35_RS11860;Name=CCO35_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11860;old_locus_tag=CCO35_11850 NZ_NPME01000003.1 Protein Homology CDS 220118 220465 . + 0 ID=cds-WP_023220797.1;Parent=gene-CCO35_RS11860;Dbxref=GenBank:WP_023220797.1;Name=WP_023220797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=CCO35_RS11860;product=DUF1493 family protein;protein_id=WP_023220797.1;transl_table=11 NZ_NPME01000003.1 RefSeq pseudogene 220515 220607 . + . ID=gene-CCO35_RS11865;Name=CCO35_RS11865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS11865;partial=true;pseudo=true;start_range=.,220515 NZ_NPME01000003.1 Protein Homology CDS 220515 220607 . + 0 ID=cds-CCO35_RS11865;Parent=gene-CCO35_RS11865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=CCO35_RS11865;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,220515;transl_table=11 NZ_NPME01000003.1 RefSeq pseudogene 220680 221110 . - . ID=gene-CCO35_RS11870;Name=CCO35_RS11870;end_range=221110,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS11870;old_locus_tag=CCO35_11855;partial=true;pseudo=true NZ_NPME01000003.1 Protein Homology CDS 220680 221110 . - 0 ID=cds-CCO35_RS11870;Parent=gene-CCO35_RS11870;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=221110,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=CCO35_RS11870;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_NPME01000003.1 RefSeq gene 221334 221990 . + . ID=gene-CCO35_RS11875;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=CCO35_RS11875;old_locus_tag=CCO35_11860 NZ_NPME01000003.1 Protein Homology CDS 221334 221990 . + 0 ID=cds-WP_000420460.1;Parent=gene-CCO35_RS11875;Dbxref=GenBank:WP_000420460.1;Name=WP_000420460.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=CCO35_RS11875;product=protein-serine/threonine phosphatase;protein_id=WP_000420460.1;transl_table=11 NZ_NPME01000003.1 RefSeq pseudogene 222161 222283 . - . ID=gene-CCO35_RS23820;Name=CCO35_RS23820;end_range=222283,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23820;partial=true;pseudo=true NZ_NPME01000003.1 Protein Homology CDS 222161 222283 . - 0 ID=cds-CCO35_RS23820;Parent=gene-CCO35_RS23820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=222283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=CCO35_RS23820;partial=true;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_NPME01000003.1 RefSeq pseudogene 222410 222808 . - . ID=gene-CCO35_RS11885;Name=CCO35_RS11885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS11885;old_locus_tag=CCO35_11870;partial=true;pseudo=true;start_range=.,222410 NZ_NPME01000003.1 Protein Homology CDS 222410 222808 . - 0 ID=cds-CCO35_RS11885;Parent=gene-CCO35_RS11885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=CCO35_RS11885;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,222410;transl_table=11 NZ_NPME01000003.1 RefSeq gene 222966 225533 . + . ID=gene-CCO35_RS11890;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CCO35_RS11890;old_locus_tag=CCO35_11875 NZ_NPME01000003.1 Protein Homology CDS 222966 225533 . + 0 ID=cds-WP_001005807.1;Parent=gene-CCO35_RS11890;Dbxref=GenBank:WP_001005807.1;Name=WP_001005807.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=CCO35_RS11890;product=DNA mismatch repair protein MutS;protein_id=WP_001005807.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 225589 225969 . - . ID=gene-CCO35_RS11895;Name=CCO35_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11895;old_locus_tag=CCO35_11880 NZ_NPME01000003.1 Protein Homology CDS 225589 225969 . - 0 ID=cds-WP_001070464.1;Parent=gene-CCO35_RS11895;Dbxref=GenBank:WP_001070464.1;Name=WP_001070464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=CCO35_RS11895;product=DUF4440 domain-containing protein;protein_id=WP_001070464.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 225966 227174 . - . ID=gene-CCO35_RS11900;Name=CCO35_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11900;old_locus_tag=CCO35_11885 NZ_NPME01000003.1 Protein Homology CDS 225966 227174 . - 0 ID=cds-WP_031569596.1;Parent=gene-CCO35_RS11900;Dbxref=GenBank:WP_031569596.1;Name=WP_031569596.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=CCO35_RS11900;product=MFS transporter;protein_id=WP_031569596.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 227262 228194 . + . ID=gene-CCO35_RS11905;Name=CCO35_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11905;old_locus_tag=CCO35_11890 NZ_NPME01000003.1 Protein Homology CDS 227262 228194 . + 0 ID=cds-WP_000216305.1;Parent=gene-CCO35_RS11905;Dbxref=GenBank:WP_000216305.1;Name=WP_000216305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=CCO35_RS11905;product=LysR family transcriptional regulator;protein_id=WP_000216305.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 228236 229732 . - . ID=gene-CCO35_RS11910;Name=CCO35_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11910;old_locus_tag=CCO35_11895 NZ_NPME01000003.1 Protein Homology CDS 228236 229732 . - 0 ID=cds-WP_023181890.1;Parent=gene-CCO35_RS11910;Dbxref=GenBank:WP_023181890.1;Name=WP_023181890.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=CCO35_RS11910;product=GntP family permease;protein_id=WP_023181890.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 229729 230679 . - . ID=gene-CCO35_RS11915;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=CCO35_RS11915;old_locus_tag=CCO35_11900 NZ_NPME01000003.1 Protein Homology CDS 229729 230679 . - 0 ID=cds-WP_001165727.1;Parent=gene-CCO35_RS11915;Dbxref=GenBank:WP_001165727.1;Name=WP_001165727.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=CCO35_RS11915;product=D-erythronate dehydrogenase;protein_id=WP_001165727.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 230719 231495 . - . ID=gene-CCO35_RS11920;Name=CCO35_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11920;old_locus_tag=CCO35_11905 NZ_NPME01000003.1 Protein Homology CDS 230719 231495 . - 0 ID=cds-WP_001136899.1;Parent=gene-CCO35_RS11920;Dbxref=GenBank:WP_001136899.1;Name=WP_001136899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=CCO35_RS11920;product=HPr family phosphocarrier protein;protein_id=WP_001136899.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 231500 232138 . - . ID=gene-CCO35_RS11925;Name=CCO35_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11925;old_locus_tag=CCO35_11910 NZ_NPME01000003.1 Protein Homology CDS 231500 232138 . - 0 ID=cds-WP_000153636.1;Parent=gene-CCO35_RS11925;Dbxref=GenBank:WP_000153636.1;Name=WP_000153636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=CCO35_RS11925;product=aldolase;protein_id=WP_000153636.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 232135 233397 . - . ID=gene-CCO35_RS11930;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=CCO35_RS11930;old_locus_tag=CCO35_11915 NZ_NPME01000003.1 Protein Homology CDS 232135 233397 . - 0 ID=cds-WP_000912482.1;Parent=gene-CCO35_RS11930;Dbxref=GenBank:WP_000912482.1;Name=WP_000912482.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=CCO35_RS11930;product=3-oxo-tetronate kinase;protein_id=WP_000912482.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 233391 234314 . - . ID=gene-CCO35_RS11935;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=CCO35_RS11935;old_locus_tag=CCO35_11920 NZ_NPME01000003.1 Protein Homology CDS 233391 234314 . - 0 ID=cds-WP_031569601.1;Parent=gene-CCO35_RS11935;Dbxref=GenBank:WP_031569601.1;Name=WP_031569601.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=CCO35_RS11935;product=L-threonate dehydrogenase;protein_id=WP_031569601.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 234511 235275 . + . ID=gene-CCO35_RS11940;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=CCO35_RS11940;old_locus_tag=CCO35_11925 NZ_NPME01000003.1 Protein Homology CDS 234511 235275 . + 0 ID=cds-WP_000613179.1;Parent=gene-CCO35_RS11940;Dbxref=GenBank:WP_000613179.1;Name=WP_000613179.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=CCO35_RS11940;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613179.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 235294 235698 . - . ID=gene-CCO35_RS11945;Name=CCO35_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11945;old_locus_tag=CCO35_11930 NZ_NPME01000003.1 Protein Homology CDS 235294 235698 . - 0 ID=cds-WP_000423338.1;Parent=gene-CCO35_RS11945;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=CCO35_RS11945;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 235869 236462 . + . ID=gene-CCO35_RS11950;Name=CCO35_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11950;old_locus_tag=CCO35_11935 NZ_NPME01000003.1 Protein Homology CDS 235869 236462 . + 0 ID=cds-WP_001237180.1;Parent=gene-CCO35_RS11950;Dbxref=GenBank:WP_001237180.1;Name=WP_001237180.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=CCO35_RS11950;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001237180.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 236462 237889 . + . ID=gene-CCO35_RS11955;Name=CCO35_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11955;old_locus_tag=CCO35_11940 NZ_NPME01000003.1 Protein Homology CDS 236462 237889 . + 0 ID=cds-WP_000863168.1;Parent=gene-CCO35_RS11955;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=CCO35_RS11955;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 237900 238136 . + . ID=gene-CCO35_RS11960;Name=CCO35_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11960;old_locus_tag=CCO35_11945 NZ_NPME01000003.1 Protein Homology CDS 237900 238136 . + 0 ID=cds-WP_000562964.1;Parent=gene-CCO35_RS11960;Dbxref=GenBank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=CCO35_RS11960;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562964.1;transl_table=11 NZ_NPME01000003.1 RefSeq pseudogene 238181 239163 . - . ID=gene-CCO35_RS11965;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=pseudogene;locus_tag=CCO35_RS11965;old_locus_tag=CCO35_11950;pseudo=true NZ_NPME01000003.1 Protein Homology CDS 238181 239163 . - 0 ID=cds-CCO35_RS11965;Parent=gene-CCO35_RS11965;Note=frameshifted;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=CCO35_RS11965;product=RNA polymerase sigma factor RpoS;pseudo=true;transl_table=11 NZ_NPME01000003.1 RefSeq gene 239226 240296 . - . ID=gene-CCO35_RS11970;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=CCO35_RS11970;old_locus_tag=CCO35_11955 NZ_NPME01000003.1 Protein Homology CDS 239226 240296 . - 0 ID=cds-WP_223617444.1;Parent=gene-CCO35_RS11970;Dbxref=GenBank:WP_223617444.1;Name=WP_223617444.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=CCO35_RS11970;product=murein hydrolase activator NlpD;protein_id=WP_223617444.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 240226 240384 . + . ID=gene-CCO35_RS24055;Name=CCO35_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24055 NZ_NPME01000003.1 Protein Homology CDS 240226 240384 . + 0 ID=cds-WP_223148970.1;Parent=gene-CCO35_RS24055;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=CCO35_RS24055;product=peptidase;protein_id=WP_223148970.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 240523 241149 . - . ID=gene-CCO35_RS11975;Name=CCO35_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS11975;old_locus_tag=CCO35_11960 NZ_NPME01000003.1 Protein Homology CDS 240523 241149 . - 0 ID=cds-WP_000253545.1;Parent=gene-CCO35_RS11975;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=CCO35_RS11975;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 241143 241904 . - . ID=gene-CCO35_RS11980;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=CCO35_RS11980;old_locus_tag=CCO35_11965 NZ_NPME01000003.1 Protein Homology CDS 241143 241904 . - 0 ID=cds-WP_001221538.1;Parent=gene-CCO35_RS11980;Dbxref=GenBank:WP_001221538.1;Name=WP_001221538.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=CCO35_RS11980;product=5'/3'-nucleotidase SurE;protein_id=WP_001221538.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 241885 242934 . - . ID=gene-CCO35_RS11985;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=CCO35_RS11985;old_locus_tag=CCO35_11970 NZ_NPME01000003.1 Protein Homology CDS 241885 242934 . - 0 ID=cds-WP_000134248.1;Parent=gene-CCO35_RS11985;Dbxref=GenBank:WP_000134248.1;Name=WP_000134248.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=CCO35_RS11985;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134248.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 242931 243410 . - . ID=gene-CCO35_RS11990;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CCO35_RS11990;old_locus_tag=CCO35_11975 NZ_NPME01000003.1 Protein Homology CDS 242931 243410 . - 0 ID=cds-WP_001219244.1;Parent=gene-CCO35_RS11990;Dbxref=GenBank:WP_001219244.1;Name=WP_001219244.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=CCO35_RS11990;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219244.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 243410 244120 . - . ID=gene-CCO35_RS11995;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CCO35_RS11995;old_locus_tag=CCO35_11980 NZ_NPME01000003.1 Protein Homology CDS 243410 244120 . - 0 ID=cds-WP_000741648.1;Parent=gene-CCO35_RS11995;Dbxref=GenBank:WP_000741648.1;Name=WP_000741648.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=CCO35_RS11995;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741648.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 244139 244450 . - . ID=gene-CCO35_RS12000;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=CCO35_RS12000;old_locus_tag=CCO35_11985 NZ_NPME01000003.1 Protein Homology CDS 244139 244450 . - 0 ID=cds-WP_000517480.1;Parent=gene-CCO35_RS12000;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=CCO35_RS12000;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 244641 244964 . - . ID=gene-CCO35_RS12005;Name=CCO35_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12005;old_locus_tag=CCO35_11990 NZ_NPME01000003.1 Protein Homology CDS 244641 244964 . - 0 ID=cds-WP_001537530.1;Parent=gene-CCO35_RS12005;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=CCO35_RS12005;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 245015 245620 . - . ID=gene-CCO35_RS12010;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=CCO35_RS12010;old_locus_tag=CCO35_11995 NZ_NPME01000003.1 Protein Homology CDS 245015 245620 . - 0 ID=cds-WP_001173663.1;Parent=gene-CCO35_RS12010;Dbxref=GenBank:WP_001173663.1;Name=WP_001173663.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=CCO35_RS12010;product=adenylyl-sulfate kinase;protein_id=WP_001173663.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 245607 247046 . - . ID=gene-CCO35_RS12015;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=CCO35_RS12015;old_locus_tag=CCO35_12000 NZ_NPME01000003.1 Protein Homology CDS 245607 247046 . - 0 ID=cds-WP_001092256.1;Parent=gene-CCO35_RS12015;Dbxref=GenBank:WP_001092256.1;Name=WP_001092256.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=CCO35_RS12015;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001092256.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 247056 247964 . - . ID=gene-CCO35_RS12020;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=CCO35_RS12020;old_locus_tag=CCO35_12005 NZ_NPME01000003.1 Protein Homology CDS 247056 247964 . - 0 ID=cds-WP_000372384.1;Parent=gene-CCO35_RS12020;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=CCO35_RS12020;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 248215 249261 . + . ID=gene-CCO35_RS12025;Name=CCO35_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12025;old_locus_tag=CCO35_12010 NZ_NPME01000003.1 Protein Homology CDS 248215 249261 . + 0 ID=cds-WP_000490474.1;Parent=gene-CCO35_RS12025;Dbxref=GenBank:WP_000490474.1;Name=WP_000490474.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=CCO35_RS12025;product=aminopeptidase;protein_id=WP_000490474.1;transl_table=11 NZ_NPME01000003.1 RefSeq direct_repeat 249276 249731 . + . ID=id-NZ_NPME01000003.1:249276..249731;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=249276..249304;rpt_unit_seq=cggtttatccccgctggcgcggggaacac NZ_NPME01000003.1 RefSeq gene 249828 250121 . - . ID=gene-CCO35_RS12030;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=CCO35_RS12030;old_locus_tag=CCO35_12015 NZ_NPME01000003.1 Protein Homology CDS 249828 250121 . - 0 ID=cds-WP_023204590.1;Parent=gene-CCO35_RS12030;Dbxref=GenBank:WP_023204590.1;Name=WP_023204590.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=CCO35_RS12030;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_023204590.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 250121 251041 . - . ID=gene-CCO35_RS12035;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=CCO35_RS12035;old_locus_tag=CCO35_12020 NZ_NPME01000003.1 Protein Homology CDS 250121 251041 . - 0 ID=cds-WP_000144832.1;Parent=gene-CCO35_RS12035;Dbxref=GenBank:WP_000144832.1;Name=WP_000144832.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=CCO35_RS12035;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000144832.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 251038 251688 . - . ID=gene-CCO35_RS12040;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=CCO35_RS12040;old_locus_tag=CCO35_12025 NZ_NPME01000003.1 Protein Homology CDS 251038 251688 . - 0 ID=cds-WP_080177025.1;Parent=gene-CCO35_RS12040;Dbxref=GenBank:WP_080177025.1;Name=WP_080177025.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=CCO35_RS12040;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_080177025.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 251670 252416 . - . ID=gene-CCO35_RS12045;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=CCO35_RS12045;old_locus_tag=CCO35_12030 NZ_NPME01000003.1 Protein Homology CDS 251670 252416 . - 0 ID=cds-WP_080177024.1;Parent=gene-CCO35_RS12045;Dbxref=GenBank:WP_080177024.1;Name=WP_080177024.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=CCO35_RS12045;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_080177024.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 252427 253485 . - . ID=gene-CCO35_RS12050;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=CCO35_RS12050;old_locus_tag=CCO35_12035 NZ_NPME01000003.1 Protein Homology CDS 252427 253485 . - 0 ID=cds-WP_080177023.1;Parent=gene-CCO35_RS12050;Dbxref=GenBank:WP_080177023.1;Name=WP_080177023.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=CCO35_RS12050;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_080177023.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 253499 254047 . - . ID=gene-CCO35_RS12055;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=CCO35_RS12055;old_locus_tag=CCO35_12040 NZ_NPME01000003.1 Protein Homology CDS 253499 254047 . - 0 ID=cds-WP_080177022.1;Parent=gene-CCO35_RS12055;Dbxref=GenBank:WP_080177022.1;Name=WP_080177022.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117945.1;locus_tag=CCO35_RS12055;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_080177022.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 254044 255600 . - . ID=gene-CCO35_RS12060;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=CCO35_RS12060;old_locus_tag=CCO35_12045 NZ_NPME01000003.1 Protein Homology CDS 254044 255600 . - 0 ID=cds-WP_080177021.1;Parent=gene-CCO35_RS12060;Dbxref=GenBank:WP_080177021.1;Name=WP_080177021.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=CCO35_RS12060;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_080177021.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 255612 258275 . - . ID=gene-CCO35_RS12065;Name=CCO35_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12065;old_locus_tag=CCO35_12050 NZ_NPME01000003.1 Protein Homology CDS 255612 258275 . - 0 ID=cds-WP_080177020.1;Parent=gene-CCO35_RS12065;Dbxref=GenBank:WP_080177020.1;Name=WP_080177020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=CCO35_RS12065;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_080177020.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 258719 259672 . + . ID=gene-CCO35_RS12070;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=CCO35_RS12070;old_locus_tag=CCO35_12055 NZ_NPME01000003.1 Protein Homology CDS 258719 259672 . + 0 ID=cds-WP_094965355.1;Parent=gene-CCO35_RS12070;Dbxref=GenBank:WP_094965355.1;Name=WP_094965355.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=CCO35_RS12070;product=SPI-1 type III secretion system effector SopD;protein_id=WP_094965355.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 259760 260494 . - . ID=gene-CCO35_RS12075;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=CCO35_RS12075;old_locus_tag=CCO35_12060 NZ_NPME01000003.1 Protein Homology CDS 259760 260494 . - 0 ID=cds-WP_000080397.1;Parent=gene-CCO35_RS12075;Dbxref=GenBank:WP_000080397.1;Name=WP_000080397.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=CCO35_RS12075;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000080397.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 260570 262282 . - . ID=gene-CCO35_RS12085;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=CCO35_RS12085;old_locus_tag=CCO35_12070 NZ_NPME01000003.1 Protein Homology CDS 260570 262282 . - 0 ID=cds-WP_063916880.1;Parent=gene-CCO35_RS12085;Dbxref=GenBank:WP_063916880.1;Name=WP_063916880.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=CCO35_RS12085;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_063916880.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 262282 264081 . - . ID=gene-CCO35_RS12090;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=CCO35_RS12090;old_locus_tag=CCO35_12075 NZ_NPME01000003.1 Protein Homology CDS 262282 264081 . - 0 ID=cds-WP_094965347.1;Parent=gene-CCO35_RS12090;Dbxref=GenBank:WP_094965347.1;Name=WP_094965347.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=CCO35_RS12090;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_094965347.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 264517 264879 . + . ID=gene-CCO35_RS12100;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CCO35_RS12100;old_locus_tag=CCO35_12085 NZ_NPME01000003.1 Protein Homology CDS 264517 264879 . + 0 ID=cds-WP_000108312.1;Parent=gene-CCO35_RS12100;Dbxref=GenBank:WP_000108312.1;Name=WP_000108312.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=CCO35_RS12100;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108312.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 264967 265764 . - . ID=gene-CCO35_RS12105;Name=CCO35_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12105;old_locus_tag=CCO35_12090 NZ_NPME01000003.1 Protein Homology CDS 264967 265764 . - 0 ID=cds-WP_080177017.1;Parent=gene-CCO35_RS12105;Dbxref=GenBank:WP_080177017.1;Name=WP_080177017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=CCO35_RS12105;product=MBL fold metallo-hydrolase;protein_id=WP_080177017.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 266309 266980 . - . ID=gene-CCO35_RS12110;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CCO35_RS12110;old_locus_tag=CCO35_12095 NZ_NPME01000003.1 Protein Homology CDS 266309 266980 . - 0 ID=cds-WP_001199956.1;Parent=gene-CCO35_RS12110;Dbxref=GenBank:WP_001199956.1;Name=WP_001199956.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=CCO35_RS12110;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199956.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 267116 268414 . - . ID=gene-CCO35_RS12115;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CCO35_RS12115;old_locus_tag=CCO35_12100 NZ_NPME01000003.1 Protein Homology CDS 267116 268414 . - 0 ID=cds-WP_000036731.1;Parent=gene-CCO35_RS12115;Dbxref=GenBank:WP_000036731.1;Name=WP_000036731.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=CCO35_RS12115;product=phosphopyruvate hydratase;protein_id=WP_000036731.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 268497 270134 . - . ID=gene-CCO35_RS12120;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CCO35_RS12120;old_locus_tag=CCO35_12105 NZ_NPME01000003.1 Protein Homology CDS 268497 270134 . - 0 ID=cds-WP_000210864.1;Parent=gene-CCO35_RS12120;Dbxref=GenBank:WP_000210864.1;Name=WP_000210864.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=CCO35_RS12120;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210864.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 270362 271162 . - . ID=gene-CCO35_RS12125;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=CCO35_RS12125;old_locus_tag=CCO35_12110 NZ_NPME01000003.1 Protein Homology CDS 270362 271162 . - 0 ID=cds-WP_000210451.1;Parent=gene-CCO35_RS12125;Dbxref=GenBank:WP_000210451.1;Name=WP_000210451.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=CCO35_RS12125;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210451.1;transl_table=11 NZ_NPME01000003.1 RefSeq pseudogene 271768 271911 . + . ID=gene-CCO35_RS24060;Name=CCO35_RS24060;end_range=271911,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24060;old_locus_tag=CCO35_12115;partial=true;pseudo=true NZ_NPME01000003.1 Protein Homology CDS 271768 271911 . + 0 ID=cds-CCO35_RS24060;Parent=gene-CCO35_RS24060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=271911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=CCO35_RS24060;partial=true;product=fimbrial protein SteA;pseudo=true;transl_table=11 NZ_NPME01000003.1 RefSeq gene 271930 272226 . - . ID=gene-CCO35_RS12135;Name=CCO35_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12135;old_locus_tag=CCO35_12120 NZ_NPME01000003.1 Protein Homology CDS 271930 272226 . - 0 ID=cds-WP_001261199.1;Parent=gene-CCO35_RS12135;Dbxref=GenBank:WP_001261199.1;Name=WP_001261199.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=CCO35_RS12135;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001261199.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 272192 272548 . - . ID=gene-CCO35_RS12140;Name=CCO35_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12140;old_locus_tag=CCO35_12125 NZ_NPME01000003.1 Protein Homology CDS 272192 272548 . - 0 ID=cds-WP_000480218.1;Parent=gene-CCO35_RS12140;Dbxref=GenBank:WP_000480218.1;Name=WP_000480218.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=CCO35_RS12140;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_000480218.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 272633 274867 . - . ID=gene-CCO35_RS12145;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=CCO35_RS12145;old_locus_tag=CCO35_12130 NZ_NPME01000003.1 Protein Homology CDS 272633 274867 . - 0 ID=cds-WP_000226841.1;Parent=gene-CCO35_RS12145;Dbxref=GenBank:WP_000226841.1;Name=WP_000226841.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=CCO35_RS12145;product=GTP diphosphokinase;protein_id=WP_000226841.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 274919 276214 . - . ID=gene-CCO35_RS12150;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CCO35_RS12150;old_locus_tag=CCO35_12135 NZ_NPME01000003.1 Protein Homology CDS 274919 276214 . - 0 ID=cds-WP_023217503.1;Parent=gene-CCO35_RS12150;Dbxref=GenBank:WP_023217503.1;Name=WP_023217503.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=CCO35_RS12150;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_023217503.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 276272 279028 . + . ID=gene-CCO35_RS12155;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=CCO35_RS12155;old_locus_tag=CCO35_12140 NZ_NPME01000003.1 Protein Homology CDS 276272 279028 . + 0 ID=cds-WP_000186399.1;Parent=gene-CCO35_RS12155;Dbxref=GenBank:WP_000186399.1;Name=WP_000186399.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=CCO35_RS12155;product=two-component sensor histidine kinase BarA;protein_id=WP_000186399.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 279072 280214 . - . ID=gene-CCO35_RS12160;Name=CCO35_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12160;old_locus_tag=CCO35_12145 NZ_NPME01000003.1 Protein Homology CDS 279072 280214 . - 0 ID=cds-WP_000706486.1;Parent=gene-CCO35_RS12160;Dbxref=GenBank:WP_000706486.1;Name=WP_000706486.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=CCO35_RS12160;product=glycerate kinase;protein_id=WP_000706486.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 280292 281632 . - . ID=gene-CCO35_RS12165;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=CCO35_RS12165;old_locus_tag=CCO35_12150 NZ_NPME01000003.1 Protein Homology CDS 280292 281632 . - 0 ID=cds-WP_000107112.1;Parent=gene-CCO35_RS12165;Dbxref=GenBank:WP_000107112.1;Name=WP_000107112.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=CCO35_RS12165;product=glucarate dehydratase;protein_id=WP_000107112.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 281653 282993 . - . ID=gene-CCO35_RS12170;Name=CCO35_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12170;old_locus_tag=CCO35_12155 NZ_NPME01000003.1 Protein Homology CDS 281653 282993 . - 0 ID=cds-WP_000211804.1;Parent=gene-CCO35_RS12170;Dbxref=GenBank:WP_000211804.1;Name=WP_000211804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=CCO35_RS12170;product=enolase C-terminal domain-like protein;protein_id=WP_000211804.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 282990 284348 . - . ID=gene-CCO35_RS12175;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=CCO35_RS12175;old_locus_tag=CCO35_12160 NZ_NPME01000003.1 Protein Homology CDS 282990 284348 . - 0 ID=cds-WP_000097015.1;Parent=gene-CCO35_RS12175;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=CCO35_RS12175;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 284830 285279 . - . ID=gene-CCO35_RS12185;Name=CCO35_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12185;old_locus_tag=CCO35_12170 NZ_NPME01000003.1 Protein Homology CDS 284830 285279 . - 0 ID=cds-WP_000807739.1;Parent=gene-CCO35_RS12185;Dbxref=GenBank:WP_000807739.1;Name=WP_000807739.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=CCO35_RS12185;product=flavodoxin;protein_id=WP_000807739.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 285298 286080 . - . ID=gene-CCO35_RS12190;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=CCO35_RS12190;old_locus_tag=CCO35_12175 NZ_NPME01000003.1 Protein Homology CDS 285298 286080 . - 0 ID=cds-WP_000890034.1;Parent=gene-CCO35_RS12190;Dbxref=GenBank:WP_000890034.1;Name=WP_000890034.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=CCO35_RS12190;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890034.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 286080 286409 . - . ID=gene-CCO35_RS12195;Name=CCO35_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12195;old_locus_tag=CCO35_12180 NZ_NPME01000003.1 Protein Homology CDS 286080 286409 . - 0 ID=cds-WP_001530242.1;Parent=gene-CCO35_RS12195;Dbxref=GenBank:WP_001530242.1;Name=WP_001530242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=CCO35_RS12195;product=YqcC family protein;protein_id=WP_001530242.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 287021 287566 . - . ID=gene-CCO35_RS12205;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=CCO35_RS12205;old_locus_tag=CCO35_12190 NZ_NPME01000003.1 Protein Homology CDS 287021 287566 . - 0 ID=cds-WP_000343990.1;Parent=gene-CCO35_RS12205;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=CCO35_RS12205;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 287635 288483 . + . ID=gene-CCO35_RS12210;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CCO35_RS12210;old_locus_tag=CCO35_12195 NZ_NPME01000003.1 Protein Homology CDS 287635 288483 . + 0 ID=cds-WP_086801591.1;Parent=gene-CCO35_RS12210;Dbxref=GenBank:WP_086801591.1;Name=WP_086801591.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=CCO35_RS12210;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_086801591.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 288597 289961 . + . ID=gene-CCO35_RS12215;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=CCO35_RS12215;old_locus_tag=CCO35_12200 NZ_NPME01000003.1 Protein Homology CDS 288597 289961 . + 0 ID=cds-WP_000627973.1;Parent=gene-CCO35_RS12215;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=CCO35_RS12215;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 290526 291815 . + . ID=gene-CCO35_RS12220;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=CCO35_RS12220;old_locus_tag=CCO35_12205 NZ_NPME01000003.1 Protein Homology CDS 290526 291815 . + 0 ID=cds-WP_000450462.1;Parent=gene-CCO35_RS12220;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=CCO35_RS12220;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 291874 293241 . + . ID=gene-CCO35_RS12225;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=CCO35_RS12225;old_locus_tag=CCO35_12210 NZ_NPME01000003.1 Protein Homology CDS 291874 293241 . + 0 ID=cds-WP_000626384.1;Parent=gene-CCO35_RS12225;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=CCO35_RS12225;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 293411 294166 . + . ID=gene-CCO35_RS12235;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=CCO35_RS12235;old_locus_tag=CCO35_12220 NZ_NPME01000003.1 Protein Homology CDS 293411 294166 . + 0 ID=cds-WP_001818022.1;Parent=gene-CCO35_RS12235;Dbxref=GenBank:WP_001818022.1;Name=WP_001818022.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=CCO35_RS12235;product=flap endonuclease Xni;protein_id=WP_001818022.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 294258 295406 . - . ID=gene-CCO35_RS12240;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO35_RS12240;old_locus_tag=CCO35_12225 NZ_NPME01000003.1 Protein Homology CDS 294258 295406 . - 0 ID=cds-WP_000013562.1;Parent=gene-CCO35_RS12240;Dbxref=GenBank:WP_000013562.1;Name=WP_000013562.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=CCO35_RS12240;product=lactaldehyde reductase;protein_id=WP_000013562.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 295423 296070 . - . ID=gene-CCO35_RS12245;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=CCO35_RS12245;old_locus_tag=CCO35_12230 NZ_NPME01000003.1 Protein Homology CDS 295423 296070 . - 0 ID=cds-WP_000440831.1;Parent=gene-CCO35_RS12245;Dbxref=GenBank:WP_000440831.1;Name=WP_000440831.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=CCO35_RS12245;product=L-fuculose-phosphate aldolase;protein_id=WP_000440831.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 296626 297942 . + . ID=gene-CCO35_RS12250;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO35_RS12250;old_locus_tag=CCO35_12235 NZ_NPME01000003.1 Protein Homology CDS 296626 297942 . + 0 ID=cds-WP_023214390.1;Parent=gene-CCO35_RS12250;Dbxref=GenBank:WP_023214390.1;Name=WP_023214390.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=CCO35_RS12250;product=L-fucose:H+ symporter permease;protein_id=WP_023214390.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 297974 299749 . + . ID=gene-CCO35_RS12255;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=CCO35_RS12255;old_locus_tag=CCO35_12240 NZ_NPME01000003.1 Protein Homology CDS 297974 299749 . + 0 ID=cds-WP_000724126.1;Parent=gene-CCO35_RS12255;Dbxref=GenBank:WP_000724126.1;Name=WP_000724126.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=CCO35_RS12255;product=L-fucose isomerase;protein_id=WP_000724126.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 299850 301268 . + . ID=gene-CCO35_RS12260;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=CCO35_RS12260;old_locus_tag=CCO35_12245 NZ_NPME01000003.1 Protein Homology CDS 299850 301268 . + 0 ID=cds-WP_000806772.1;Parent=gene-CCO35_RS12260;Dbxref=GenBank:WP_000806772.1;Name=WP_000806772.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=CCO35_RS12260;product=L-fuculokinase;protein_id=WP_000806772.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 301270 301692 . + . ID=gene-CCO35_RS12265;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=CCO35_RS12265;old_locus_tag=CCO35_12250 NZ_NPME01000003.1 Protein Homology CDS 301270 301692 . + 0 ID=cds-WP_000920848.1;Parent=gene-CCO35_RS12265;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=CCO35_RS12265;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 301750 302460 . + . ID=gene-CCO35_RS12270;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=CCO35_RS12270;old_locus_tag=CCO35_12255 NZ_NPME01000003.1 Protein Homology CDS 301750 302460 . + 0 ID=cds-WP_000642330.1;Parent=gene-CCO35_RS12270;Dbxref=GenBank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=CCO35_RS12270;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 302519 303619 . - . ID=gene-CCO35_RS12275;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=CCO35_RS12275;old_locus_tag=CCO35_12260 NZ_NPME01000003.1 Protein Homology CDS 302519 303619 . - 0 ID=cds-WP_001045494.1;Parent=gene-CCO35_RS12275;Dbxref=GenBank:WP_001045494.1;Name=WP_001045494.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=CCO35_RS12275;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045494.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 303612 304007 . - . ID=gene-CCO35_RS12280;Name=CCO35_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12280;old_locus_tag=CCO35_12265 NZ_NPME01000003.1 Protein Homology CDS 303612 304007 . - 0 ID=cds-WP_000203913.1;Parent=gene-CCO35_RS12280;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=CCO35_RS12280;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 304026 304943 . - . ID=gene-CCO35_RS12285;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=CCO35_RS12285;old_locus_tag=CCO35_12270 NZ_NPME01000003.1 Protein Homology CDS 304026 304943 . - 0 ID=cds-WP_000044409.1;Parent=gene-CCO35_RS12285;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=CCO35_RS12285;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 305290 305517 . - . ID=gene-CCO35_RS12290;Name=CCO35_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12290;old_locus_tag=CCO35_12275 NZ_NPME01000003.1 Protein Homology CDS 305290 305517 . - 0 ID=cds-WP_000750393.1;Parent=gene-CCO35_RS12290;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=CCO35_RS12290;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 305710 306915 . + . ID=gene-CCO35_RS12295;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=CCO35_RS12295;old_locus_tag=CCO35_12280 NZ_NPME01000003.1 Protein Homology CDS 305710 306915 . + 0 ID=cds-WP_000991052.1;Parent=gene-CCO35_RS12295;Dbxref=GenBank:WP_000991052.1;Name=WP_000991052.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=CCO35_RS12295;product=cysteine desulfurase CsdA;protein_id=WP_000991052.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 306915 307358 . + . ID=gene-CCO35_RS12300;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=CCO35_RS12300;old_locus_tag=CCO35_12285 NZ_NPME01000003.1 Protein Homology CDS 306915 307358 . + 0 ID=cds-WP_000184198.1;Parent=gene-CCO35_RS12300;Dbxref=GenBank:WP_000184198.1;Name=WP_000184198.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=CCO35_RS12300;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184198.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 307658 308545 . + . ID=gene-CCO35_RS12305;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO35_RS12305;old_locus_tag=CCO35_12290 NZ_NPME01000003.1 Protein Homology CDS 307658 308545 . + 0 ID=cds-WP_077248417.1;Parent=gene-CCO35_RS12305;Dbxref=GenBank:WP_077248417.1;Name=WP_077248417.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=CCO35_RS12305;product=EamA family transporter RarD;protein_id=WP_077248417.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 308597 309403 . - . ID=gene-CCO35_RS12310;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=CCO35_RS12310;old_locus_tag=CCO35_12295 NZ_NPME01000003.1 Protein Homology CDS 308597 309403 . - 0 ID=cds-WP_000117742.1;Parent=gene-CCO35_RS12310;Dbxref=GenBank:WP_000117742.1;Name=WP_000117742.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=CCO35_RS12310;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117742.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 309513 310610 . - . ID=gene-CCO35_RS12315;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=CCO35_RS12315;old_locus_tag=CCO35_12300 NZ_NPME01000003.1 Protein Homology CDS 309513 310610 . - 0 ID=cds-WP_000678621.1;Parent=gene-CCO35_RS12315;Dbxref=GenBank:WP_000678621.1;Name=WP_000678621.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=CCO35_RS12315;product=murein transglycosylase A;protein_id=WP_000678621.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 310818 310894 . + . ID=gene-CCO35_RS12320;Name=CCO35_RS12320;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS12320;old_locus_tag=CCO35_12305 NZ_NPME01000003.1 tRNAscan-SE tRNA 310818 310894 . + . ID=rna-CCO35_RS12320;Parent=gene-CCO35_RS12320;anticodon=(pos:310852..310854);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS12320;product=tRNA-Met NZ_NPME01000003.1 tRNAscan-SE exon 310818 310894 . + . ID=exon-CCO35_RS12320-1;Parent=rna-CCO35_RS12320;anticodon=(pos:310852..310854);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS12320;product=tRNA-Met NZ_NPME01000003.1 RefSeq gene 311004 312257 . - . ID=gene-CCO35_RS12325;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=CCO35_RS12325;old_locus_tag=CCO35_12310 NZ_NPME01000003.1 Protein Homology CDS 311004 312257 . - 0 ID=cds-WP_023212730.1;Parent=gene-CCO35_RS12325;Dbxref=GenBank:WP_023212730.1;Name=WP_023212730.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=CCO35_RS12325;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_023212730.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 312490 313821 . + . ID=gene-CCO35_RS12330;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=CCO35_RS12330;old_locus_tag=CCO35_12315 NZ_NPME01000003.1 Protein Homology CDS 312490 313821 . + 0 ID=cds-WP_031601835.1;Parent=gene-CCO35_RS12330;Dbxref=GenBank:WP_031601835.1;Name=WP_031601835.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=CCO35_RS12330;product=amino-acid N-acetyltransferase;protein_id=WP_031601835.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 313924 315759 . - . ID=gene-CCO35_RS12335;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=CCO35_RS12335;old_locus_tag=CCO35_12320 NZ_NPME01000003.1 Protein Homology CDS 313924 315759 . - 0 ID=cds-WP_023233367.1;Parent=gene-CCO35_RS12335;Dbxref=GenBank:WP_023233367.1;Name=WP_023233367.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=CCO35_RS12335;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_023233367.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 315756 319301 . - . ID=gene-CCO35_RS12340;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=CCO35_RS12340;old_locus_tag=CCO35_12325 NZ_NPME01000003.1 Protein Homology CDS 315756 319301 . - 0 ID=cds-WP_001000548.1;Parent=gene-CCO35_RS12340;Dbxref=GenBank:WP_001000548.1;Name=WP_001000548.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=CCO35_RS12340;product=exodeoxyribonuclease V subunit beta;protein_id=WP_001000548.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 319294 322182 . - . ID=gene-CCO35_RS12345;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=CCO35_RS12345;old_locus_tag=CCO35_12330 NZ_NPME01000003.1 Protein Homology CDS 319294 322182 . - 0 ID=cds-WP_094965348.1;Parent=gene-CCO35_RS12345;Dbxref=GenBank:WP_094965348.1;Name=WP_094965348.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=CCO35_RS12345;product=pitrilysin;protein_id=WP_094965348.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 322360 325731 . - . ID=gene-CCO35_RS12350;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=CCO35_RS12350;old_locus_tag=CCO35_12335 NZ_NPME01000003.1 Protein Homology CDS 322360 325731 . - 0 ID=cds-WP_000946832.1;Parent=gene-CCO35_RS12350;Dbxref=GenBank:WP_000946832.1;Name=WP_000946832.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=CCO35_RS12350;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946832.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 325747 326067 . - . ID=gene-CCO35_RS12355;Name=CCO35_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12355;old_locus_tag=CCO35_12340 NZ_NPME01000003.1 Protein Homology CDS 325747 326067 . - 0 ID=cds-WP_094965349.1;Parent=gene-CCO35_RS12355;Dbxref=GenBank:WP_094965349.1;Name=WP_094965349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=CCO35_RS12355;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_094965349.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 326052 326459 . - . ID=gene-CCO35_RS12360;Name=CCO35_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12360;old_locus_tag=CCO35_12345 NZ_NPME01000003.1 Protein Homology CDS 326052 326459 . - 0 ID=cds-WP_080178402.1;Parent=gene-CCO35_RS12360;Dbxref=GenBank:WP_080178402.1;Name=WP_080178402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=CCO35_RS12360;product=DUF2509 family protein;protein_id=WP_080178402.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 326456 327019 . - . ID=gene-CCO35_RS12365;Name=CCO35_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12365;old_locus_tag=CCO35_12350 NZ_NPME01000003.1 Protein Homology CDS 326456 327019 . - 0 ID=cds-WP_088546066.1;Parent=gene-CCO35_RS12365;Dbxref=GenBank:WP_088546066.1;Name=WP_088546066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=CCO35_RS12365;product=prepilin peptidase-dependent protein;protein_id=WP_088546066.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 327010 327480 . - . ID=gene-CCO35_RS12370;Name=CCO35_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12370;old_locus_tag=CCO35_12355 NZ_NPME01000003.1 Protein Homology CDS 327010 327480 . - 0 ID=cds-WP_000744668.1;Parent=gene-CCO35_RS12370;Dbxref=GenBank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=CCO35_RS12370;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 327665 328459 . - . ID=gene-CCO35_RS12380;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=CCO35_RS12380;old_locus_tag=CCO35_12365 NZ_NPME01000003.1 Protein Homology CDS 327665 328459 . - 0 ID=cds-WP_000816247.1;Parent=gene-CCO35_RS12380;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=CCO35_RS12380;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 328466 329341 . - . ID=gene-CCO35_RS12385;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CCO35_RS12385;old_locus_tag=CCO35_12370 NZ_NPME01000003.1 Protein Homology CDS 328466 329341 . - 0 ID=cds-WP_000204645.1;Parent=gene-CCO35_RS12385;Dbxref=GenBank:WP_000204645.1;Name=WP_000204645.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=CCO35_RS12385;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 329557 331803 . - . ID=gene-CCO35_RS12390;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CCO35_RS12390;old_locus_tag=CCO35_12375 NZ_NPME01000003.1 Protein Homology CDS 329557 331803 . - 0 ID=cds-WP_000957887.1;Parent=gene-CCO35_RS12390;Dbxref=GenBank:WP_000957887.1;Name=WP_000957887.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=CCO35_RS12390;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957887.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 331816 332346 . - . ID=gene-CCO35_RS12395;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=CCO35_RS12395;old_locus_tag=CCO35_12380 NZ_NPME01000003.1 Protein Homology CDS 331816 332346 . - 0 ID=cds-WP_000564481.1;Parent=gene-CCO35_RS12395;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=CCO35_RS12395;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 333029 333724 . + . ID=gene-CCO35_RS12400;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=CCO35_RS12400;old_locus_tag=CCO35_12385 NZ_NPME01000003.1 Protein Homology CDS 333029 333724 . + 0 ID=cds-WP_001274930.1;Parent=gene-CCO35_RS12400;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=CCO35_RS12400;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 333906 334619 . + . ID=gene-CCO35_RS12405;Name=CCO35_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12405;old_locus_tag=CCO35_12390 NZ_NPME01000003.1 Protein Homology CDS 333906 334619 . + 0 ID=cds-WP_000895635.1;Parent=gene-CCO35_RS12405;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=CCO35_RS12405;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 334789 335007 . + . ID=gene-CCO35_RS12410;Name=CCO35_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12410;old_locus_tag=CCO35_12395 NZ_NPME01000003.1 Protein Homology CDS 334789 335007 . + 0 ID=cds-WP_000758662.1;Parent=gene-CCO35_RS12410;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=CCO35_RS12410;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 335198 336238 . + . ID=gene-CCO35_RS12415;Name=CCO35_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12415;old_locus_tag=CCO35_12400 NZ_NPME01000003.1 Protein Homology CDS 335198 336238 . + 0 ID=cds-WP_000558960.1;Parent=gene-CCO35_RS12415;Dbxref=GenBank:WP_000558960.1;Name=WP_000558960.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=CCO35_RS12415;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558960.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 336325 337527 . - . ID=gene-CCO35_RS12420;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=CCO35_RS12420;old_locus_tag=CCO35_12405 NZ_NPME01000003.1 Protein Homology CDS 336325 337527 . - 0 ID=cds-WP_000004684.1;Parent=gene-CCO35_RS12420;Dbxref=GenBank:WP_000004684.1;Name=WP_000004684.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=CCO35_RS12420;product=lysophospholipid transporter LplT;protein_id=WP_000004684.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 337520 339679 . - . ID=gene-CCO35_RS12425;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=CCO35_RS12425;old_locus_tag=CCO35_12410 NZ_NPME01000003.1 Protein Homology CDS 337520 339679 . - 0 ID=cds-WP_000896101.1;Parent=gene-CCO35_RS12425;Dbxref=GenBank:WP_000896101.1;Name=WP_000896101.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=CCO35_RS12425;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000896101.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 340272 341300 . + . ID=gene-CCO35_RS12430;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=CCO35_RS12430;old_locus_tag=CCO35_12415 NZ_NPME01000003.1 Protein Homology CDS 340272 341300 . + 0 ID=cds-WP_000201030.1;Parent=gene-CCO35_RS12430;Dbxref=GenBank:WP_000201030.1;Name=WP_000201030.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=CCO35_RS12430;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201030.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 341311 342333 . + . ID=gene-CCO35_RS12435;Name=CCO35_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12435;old_locus_tag=CCO35_12420 NZ_NPME01000003.1 Protein Homology CDS 341311 342333 . + 0 ID=cds-WP_000968338.1;Parent=gene-CCO35_RS12435;Dbxref=GenBank:WP_000968338.1;Name=WP_000968338.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=CCO35_RS12435;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968338.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 342343 343605 . - . ID=gene-CCO35_RS12440;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CCO35_RS12440;old_locus_tag=CCO35_12425 NZ_NPME01000003.1 Protein Homology CDS 342343 343605 . - 0 ID=cds-WP_000058915.1;Parent=gene-CCO35_RS12440;Dbxref=GenBank:WP_000058915.1;Name=WP_000058915.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406298.1;locus_tag=CCO35_RS12440;product=diaminopimelate decarboxylase;protein_id=WP_000058915.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 343723 344658 . + . ID=gene-CCO35_RS12445;Name=CCO35_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12445;old_locus_tag=CCO35_12430 NZ_NPME01000003.1 Protein Homology CDS 343723 344658 . + 0 ID=cds-WP_000741798.1;Parent=gene-CCO35_RS12445;Dbxref=GenBank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=CCO35_RS12445;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 344630 345337 . - . ID=gene-CCO35_RS12450;Name=CCO35_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12450;old_locus_tag=CCO35_12435 NZ_NPME01000003.1 Protein Homology CDS 344630 345337 . - 0 ID=cds-WP_000848629.1;Parent=gene-CCO35_RS12450;Dbxref=GenBank:WP_000848629.1;Name=WP_000848629.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=CCO35_RS12450;product=aspartate/glutamate racemase;protein_id=WP_000848629.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 345450 346868 . - . ID=gene-CCO35_RS12455;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=CCO35_RS12455;old_locus_tag=CCO35_12440 NZ_NPME01000003.1 Protein Homology CDS 345450 346868 . - 0 ID=cds-WP_031566436.1;Parent=gene-CCO35_RS12455;Dbxref=GenBank:WP_031566436.1;Name=WP_031566436.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=CCO35_RS12455;product=arabinose-proton symporter AraE;protein_id=WP_031566436.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 347220 347981 . - . ID=gene-CCO35_RS12460;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=CCO35_RS12460;old_locus_tag=CCO35_12445 NZ_NPME01000003.1 Protein Homology CDS 347220 347981 . - 0 ID=cds-WP_000602478.1;Parent=gene-CCO35_RS12460;Dbxref=GenBank:WP_000602478.1;Name=WP_000602478.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=CCO35_RS12460;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602478.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 348038 348874 . - . ID=gene-CCO35_RS12465;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=CCO35_RS12465;old_locus_tag=CCO35_12450 NZ_NPME01000003.1 Protein Homology CDS 348038 348874 . - 0 ID=cds-WP_000383274.1;Parent=gene-CCO35_RS12465;Dbxref=GenBank:WP_000383274.1;Name=WP_000383274.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=CCO35_RS12465;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383274.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 349304 350482 . - . ID=gene-CCO35_RS12475;Name=CCO35_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12475;old_locus_tag=CCO35_12460 NZ_NPME01000003.1 Protein Homology CDS 349304 350482 . - 0 ID=cds-WP_000665979.1;Parent=gene-CCO35_RS12475;Dbxref=GenBank:WP_000665979.1;Name=WP_000665979.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=CCO35_RS12475;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665979.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 350605 351468 . - . ID=gene-CCO35_RS12480;Name=CCO35_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12480;old_locus_tag=CCO35_12465 NZ_NPME01000003.1 Protein Homology CDS 350605 351468 . - 0 ID=cds-WP_001270779.1;Parent=gene-CCO35_RS12480;Dbxref=GenBank:WP_001270779.1;Name=WP_001270779.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=CCO35_RS12480;product=LysR family transcriptional regulator;protein_id=WP_001270779.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 351572 352027 . + . ID=gene-CCO35_RS12485;Name=CCO35_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12485;old_locus_tag=CCO35_12470 NZ_NPME01000003.1 Protein Homology CDS 351572 352027 . + 0 ID=cds-WP_001530217.1;Parent=gene-CCO35_RS12485;Dbxref=GenBank:WP_001530217.1;Name=WP_001530217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=CCO35_RS12485;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001530217.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 352169 353398 . + . ID=gene-CCO35_RS12490;Name=CCO35_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12490;old_locus_tag=CCO35_12475 NZ_NPME01000003.1 Protein Homology CDS 352169 353398 . + 0 ID=cds-WP_000036828.1;Parent=gene-CCO35_RS12490;Dbxref=GenBank:WP_000036828.1;Name=WP_000036828.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=CCO35_RS12490;product=amino acid permease;protein_id=WP_000036828.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 353429 353701 . - . ID=gene-CCO35_RS12495;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=CCO35_RS12495;old_locus_tag=CCO35_12480 NZ_NPME01000003.1 Protein Homology CDS 353429 353701 . - 0 ID=cds-WP_000019953.1;Parent=gene-CCO35_RS12495;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=CCO35_RS12495;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 353822 354658 . + . ID=gene-CCO35_RS12500;Name=CCO35_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12500;old_locus_tag=CCO35_12485 NZ_NPME01000003.1 Protein Homology CDS 353822 354658 . + 0 ID=cds-WP_023226312.1;Parent=gene-CCO35_RS12500;Dbxref=GenBank:WP_023226312.1;Name=WP_023226312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=CCO35_RS12500;product=nickel/cobalt efflux protein RcnA;protein_id=WP_023226312.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 354868 355626 . - . ID=gene-CCO35_RS12505;Name=CCO35_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12505;old_locus_tag=CCO35_12490 NZ_NPME01000003.1 Protein Homology CDS 354868 355626 . - 0 ID=cds-WP_000134782.1;Parent=gene-CCO35_RS12505;Dbxref=GenBank:WP_000134782.1;Name=WP_000134782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=CCO35_RS12505;product=transcriptional regulator;protein_id=WP_000134782.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 355613 356125 . - . ID=gene-CCO35_RS12510;Name=CCO35_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12510;old_locus_tag=CCO35_12495 NZ_NPME01000003.1 Protein Homology CDS 355613 356125 . - 0 ID=cds-WP_001613584.1;Parent=gene-CCO35_RS12510;Dbxref=GenBank:WP_001613584.1;Name=WP_001613584.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=CCO35_RS12510;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_001613584.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 356234 357316 . - . ID=gene-CCO35_RS12515;Name=CCO35_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12515;old_locus_tag=CCO35_12500 NZ_NPME01000003.1 Protein Homology CDS 356234 357316 . - 0 ID=cds-WP_000147767.1;Parent=gene-CCO35_RS12515;Dbxref=GenBank:WP_000147767.1;Name=WP_000147767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=CCO35_RS12515;product=fimbrial protein;protein_id=WP_000147767.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 357313 358056 . - . ID=gene-CCO35_RS12520;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=CCO35_RS12520;old_locus_tag=CCO35_12505 NZ_NPME01000003.1 Protein Homology CDS 357313 358056 . - 0 ID=cds-WP_000798491.1;Parent=gene-CCO35_RS12520;Dbxref=GenBank:WP_000798491.1;Name=WP_000798491.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=CCO35_RS12520;product=fimbrial biogenesis chaperone StdC;protein_id=WP_000798491.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 358097 360586 . - . ID=gene-CCO35_RS12525;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=CCO35_RS12525;old_locus_tag=CCO35_12510 NZ_NPME01000003.1 Protein Homology CDS 358097 360586 . - 0 ID=cds-WP_000705498.1;Parent=gene-CCO35_RS12525;Dbxref=GenBank:WP_000705498.1;Name=WP_000705498.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=CCO35_RS12525;product=fimbrial outer membrane usher protein StdB;protein_id=WP_000705498.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 360706 361293 . - . ID=gene-CCO35_RS12530;Name=CCO35_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12530;old_locus_tag=CCO35_12515 NZ_NPME01000003.1 Protein Homology CDS 360706 361293 . - 0 ID=cds-WP_001244645.1;Parent=gene-CCO35_RS12530;Dbxref=GenBank:WP_001244645.1;Name=WP_001244645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244645.1;locus_tag=CCO35_RS12530;product=fimbrial protein;protein_id=WP_001244645.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 362012 362644 . - . ID=gene-CCO35_RS12535;Name=CCO35_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12535;old_locus_tag=CCO35_12520 NZ_NPME01000003.1 Protein Homology CDS 362012 362644 . - 0 ID=cds-WP_000835269.1;Parent=gene-CCO35_RS12535;Dbxref=GenBank:WP_000835269.1;Name=WP_000835269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=CCO35_RS12535;product=YfdX family protein;protein_id=WP_000835269.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 362691 363227 . - . ID=gene-CCO35_RS12540;Name=CCO35_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12540;old_locus_tag=CCO35_12525 NZ_NPME01000003.1 Protein Homology CDS 362691 363227 . - 0 ID=cds-WP_001038499.1;Parent=gene-CCO35_RS12540;Dbxref=GenBank:WP_001038499.1;Name=WP_001038499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=CCO35_RS12540;product=STM3031 family outer membrane protein;protein_id=WP_001038499.1;transl_table=11 NZ_NPME01000003.1 RefSeq pseudogene 364031 364201 . - . ID=gene-CCO35_RS23650;Name=vapC;end_range=364201,.;gbkey=Gene;gene=vapC;gene_biotype=pseudogene;locus_tag=CCO35_RS23650;partial=true;pseudo=true NZ_NPME01000003.1 Protein Homology CDS 364031 364201 . - 0 ID=cds-CCO35_RS23650;Parent=gene-CCO35_RS23650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=364201,.;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=CCO35_RS23650;partial=true;product=tRNA(fMet)-specific endonuclease VapC;pseudo=true;transl_table=11 NZ_NPME01000003.1 RefSeq gene 364392 365198 . + . ID=gene-CCO35_RS12560;Name=CCO35_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12560;old_locus_tag=CCO35_12545 NZ_NPME01000003.1 Protein Homology CDS 364392 365198 . + 0 ID=cds-WP_001635492.1;Parent=gene-CCO35_RS12560;Dbxref=GenBank:WP_001635492.1;Name=WP_001635492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=CCO35_RS12560;product=DUF1460 domain-containing protein;protein_id=WP_001635492.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 365322 365395 . - . ID=gene-CCO35_RS12565;Name=CCO35_RS12565;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS12565;old_locus_tag=CCO35_12550 NZ_NPME01000003.1 tRNAscan-SE tRNA 365322 365395 . - . ID=rna-CCO35_RS12565;Parent=gene-CCO35_RS12565;anticodon=(pos:complement(365361..365363));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS12565;product=tRNA-Gly NZ_NPME01000003.1 tRNAscan-SE exon 365322 365395 . - . ID=exon-CCO35_RS12565-1;Parent=rna-CCO35_RS12565;anticodon=(pos:complement(365361..365363));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS12565;product=tRNA-Gly NZ_NPME01000003.1 RefSeq gene 365475 366233 . - . ID=gene-CCO35_RS12570;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=CCO35_RS12570;old_locus_tag=CCO35_12555 NZ_NPME01000003.1 Protein Homology CDS 365475 366233 . - 0 ID=cds-WP_000244328.1;Parent=gene-CCO35_RS12570;Dbxref=GenBank:WP_000244328.1;Name=WP_000244328.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=CCO35_RS12570;product=amidase activator ActS;protein_id=WP_000244328.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 366498 367043 . + . ID=gene-CCO35_RS12580;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=CCO35_RS12580;old_locus_tag=CCO35_12565 NZ_NPME01000003.1 Protein Homology CDS 366498 367043 . + 0 ID=cds-WP_000133994.1;Parent=gene-CCO35_RS12580;Dbxref=GenBank:WP_000133994.1;Name=WP_000133994.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=CCO35_RS12580;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000133994.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 367119 368636 . - . ID=gene-CCO35_RS12585;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CCO35_RS12585;old_locus_tag=CCO35_12570 NZ_NPME01000003.1 Protein Homology CDS 367119 368636 . - 0 ID=cds-WP_000003339.1;Parent=gene-CCO35_RS12585;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=CCO35_RS12585;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 368646 369744 . - . ID=gene-CCO35_RS12590;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CCO35_RS12590;old_locus_tag=CCO35_12575 NZ_NPME01000003.1 Protein Homology CDS 369670 369744 . - 0 ID=cds-WP_010989230.1;Parent=gene-CCO35_RS12590;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO35_RS12590;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPME01000003.1 Protein Homology CDS 368646 369668 . - 0 ID=cds-WP_010989230.1;Parent=gene-CCO35_RS12590;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO35_RS12590;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 369849 371582 . - . ID=gene-CCO35_RS12595;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CCO35_RS12595;old_locus_tag=CCO35_12580 NZ_NPME01000003.1 Protein Homology CDS 369849 371582 . - 0 ID=cds-WP_000813394.1;Parent=gene-CCO35_RS12595;Dbxref=GenBank:WP_000813394.1;Name=WP_000813394.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=CCO35_RS12595;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813394.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 371588 372301 . - . ID=gene-CCO35_RS12600;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=CCO35_RS12600;old_locus_tag=CCO35_12585 NZ_NPME01000003.1 Protein Homology CDS 371588 372301 . - 0 ID=cds-WP_000745614.1;Parent=gene-CCO35_RS12600;Dbxref=GenBank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=CCO35_RS12600;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 372325 373221 . - . ID=gene-CCO35_RS12605;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CCO35_RS12605;old_locus_tag=CCO35_12590 NZ_NPME01000003.1 Protein Homology CDS 372325 373221 . - 0 ID=cds-WP_000434302.1;Parent=gene-CCO35_RS12605;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=CCO35_RS12605;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 373334 373855 . + . ID=gene-CCO35_RS12610;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=CCO35_RS12610;old_locus_tag=CCO35_12595 NZ_NPME01000003.1 Protein Homology CDS 373334 373855 . + 0 ID=cds-WP_001055885.1;Parent=gene-CCO35_RS12610;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=CCO35_RS12610;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 373908 374321 . - . ID=gene-CCO35_RS12615;Name=CCO35_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12615;old_locus_tag=CCO35_12600 NZ_NPME01000003.1 Protein Homology CDS 373908 374321 . - 0 ID=cds-WP_000244757.1;Parent=gene-CCO35_RS12615;Dbxref=GenBank:WP_000244757.1;Name=WP_000244757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=CCO35_RS12615;product=protein YgfX;protein_id=WP_000244757.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 374302 374568 . - . ID=gene-CCO35_RS12620;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=CCO35_RS12620;old_locus_tag=CCO35_12605 NZ_NPME01000003.1 Protein Homology CDS 374302 374568 . - 0 ID=cds-WP_000351186.1;Parent=gene-CCO35_RS12620;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=CCO35_RS12620;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 374818 375798 . + . ID=gene-CCO35_RS12630;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=CCO35_RS12630;old_locus_tag=CCO35_12615 NZ_NPME01000003.1 Protein Homology CDS 374818 375798 . + 0 ID=cds-WP_000874170.1;Parent=gene-CCO35_RS12630;Dbxref=GenBank:WP_000874170.1;Name=WP_000874170.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=CCO35_RS12630;product=tRNA-modifying protein YgfZ;protein_id=WP_000874170.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 375914 376573 . - . ID=gene-CCO35_RS12640;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CCO35_RS12640;old_locus_tag=CCO35_12625 NZ_NPME01000003.1 Protein Homology CDS 375914 376573 . - 0 ID=cds-WP_000250289.1;Parent=gene-CCO35_RS12640;Dbxref=GenBank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=CCO35_RS12640;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250289.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 376737 377048 . - . ID=gene-CCO35_RS12645;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=CCO35_RS12645;old_locus_tag=CCO35_12630 NZ_NPME01000003.1 Protein Homology CDS 376737 377048 . - 0 ID=cds-WP_001182976.1;Parent=gene-CCO35_RS12645;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=CCO35_RS12645;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 377207 378640 . + . ID=gene-CCO35_RS12650;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=CCO35_RS12650;old_locus_tag=CCO35_12635 NZ_NPME01000003.1 Protein Homology CDS 377207 378640 . + 0 ID=cds-WP_001230152.1;Parent=gene-CCO35_RS12650;Dbxref=GenBank:WP_001230152.1;Name=WP_001230152.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=CCO35_RS12650;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001230152.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 378688 379581 . - . ID=gene-CCO35_RS12655;Name=CCO35_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12655;old_locus_tag=CCO35_12640 NZ_NPME01000003.1 Protein Homology CDS 378688 379581 . - 0 ID=cds-WP_000819367.1;Parent=gene-CCO35_RS12655;Dbxref=GenBank:WP_000819367.1;Name=WP_000819367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=CCO35_RS12655;product=transporter;protein_id=WP_000819367.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 380037 382910 . - . ID=gene-CCO35_RS12665;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=CCO35_RS12665;old_locus_tag=CCO35_12650 NZ_NPME01000003.1 Protein Homology CDS 380037 382910 . - 0 ID=cds-WP_094965350.1;Parent=gene-CCO35_RS12665;Dbxref=GenBank:WP_094965350.1;Name=WP_094965350.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=CCO35_RS12665;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_094965350.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 383073 383462 . - . ID=gene-CCO35_RS12670;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CCO35_RS12670;old_locus_tag=CCO35_12655 NZ_NPME01000003.1 Protein Homology CDS 383073 383462 . - 0 ID=cds-WP_001295377.1;Parent=gene-CCO35_RS12670;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=CCO35_RS12670;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 383488 384582 . - . ID=gene-CCO35_RS12675;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CCO35_RS12675;old_locus_tag=CCO35_12660 NZ_NPME01000003.1 Protein Homology CDS 383488 384582 . - 0 ID=cds-WP_000068736.1;Parent=gene-CCO35_RS12675;Dbxref=GenBank:WP_000068736.1;Name=WP_000068736.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=CCO35_RS12675;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068736.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 385037 386239 . - . ID=gene-CCO35_RS12680;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=CCO35_RS12680;old_locus_tag=CCO35_12665 NZ_NPME01000003.1 Protein Homology CDS 385037 386239 . - 0 ID=cds-WP_001192144.1;Parent=gene-CCO35_RS12680;Dbxref=GenBank:WP_001192144.1;Name=WP_001192144.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=CCO35_RS12680;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192144.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 386365 387543 . - . ID=gene-CCO35_RS12685;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=CCO35_RS12685;old_locus_tag=CCO35_12670 NZ_NPME01000003.1 Protein Homology CDS 386365 387543 . - 0 ID=cds-WP_094965351.1;Parent=gene-CCO35_RS12685;Dbxref=GenBank:WP_094965351.1;Name=WP_094965351.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=CCO35_RS12685;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_094965351.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 387540 388856 . - . ID=gene-CCO35_RS12690;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=CCO35_RS12690;old_locus_tag=CCO35_12675 NZ_NPME01000003.1 Protein Homology CDS 387540 388856 . - 0 ID=cds-WP_000193681.1;Parent=gene-CCO35_RS12690;Dbxref=GenBank:WP_000193681.1;Name=WP_000193681.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=CCO35_RS12690;product=Xaa-Pro aminopeptidase;protein_id=WP_000193681.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 388882 389460 . - . ID=gene-CCO35_RS12695;Name=CCO35_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12695;old_locus_tag=CCO35_12680 NZ_NPME01000003.1 Protein Homology CDS 388882 389460 . - 0 ID=cds-WP_000027236.1;Parent=gene-CCO35_RS12695;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=CCO35_RS12695;product=YecA family protein;protein_id=WP_000027236.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 389627 389956 . + . ID=gene-CCO35_RS12705;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CCO35_RS12705;old_locus_tag=CCO35_12690 NZ_NPME01000003.1 Protein Homology CDS 389627 389956 . + 0 ID=cds-WP_001276011.1;Parent=gene-CCO35_RS12705;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=CCO35_RS12705;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 389998 390181 . + . ID=gene-CCO35_RS12710;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CCO35_RS12710;old_locus_tag=CCO35_12695 NZ_NPME01000003.1 cmsearch ncRNA 389998 390181 . + . ID=rna-CCO35_RS12710;Parent=gene-CCO35_RS12710;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS12710;product=6S RNA NZ_NPME01000003.1 cmsearch exon 389998 390181 . + . ID=exon-CCO35_RS12710-1;Parent=rna-CCO35_RS12710;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS12710;product=6S RNA NZ_NPME01000003.1 RefSeq gene 390202 390798 . + . ID=gene-CCO35_RS12715;Name=CCO35_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12715;old_locus_tag=CCO35_12700 NZ_NPME01000003.1 Protein Homology CDS 390202 390798 . + 0 ID=cds-WP_001528060.1;Parent=gene-CCO35_RS12715;Dbxref=GenBank:WP_001528060.1;Name=WP_001528060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=CCO35_RS12715;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_001528060.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 391179 392411 . - . ID=gene-CCO35_RS12720;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CCO35_RS12720;old_locus_tag=CCO35_12705 NZ_NPME01000003.1 Protein Homology CDS 391179 392411 . - 0 ID=cds-WP_001151627.1;Parent=gene-CCO35_RS12720;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=CCO35_RS12720;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 392678 393337 . - . ID=gene-CCO35_RS12725;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CCO35_RS12725;old_locus_tag=CCO35_12710 NZ_NPME01000003.1 Protein Homology CDS 392678 393337 . - 0 ID=cds-WP_000189741.1;Parent=gene-CCO35_RS12725;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=CCO35_RS12725;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 393491 394384 . + . ID=gene-CCO35_RS12730;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=CCO35_RS12730;old_locus_tag=CCO35_12715 NZ_NPME01000003.1 Protein Homology CDS 393491 394384 . + 0 ID=cds-WP_000828345.1;Parent=gene-CCO35_RS12730;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=CCO35_RS12730;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 394552 395298 . - . ID=gene-CCO35_RS12735;Name=CCO35_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12735;old_locus_tag=CCO35_12720 NZ_NPME01000003.1 Protein Homology CDS 394552 395298 . - 0 ID=cds-WP_000669854.1;Parent=gene-CCO35_RS12735;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=CCO35_RS12735;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 395392 396027 . - . ID=gene-CCO35_RS12740;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=CCO35_RS12740;old_locus_tag=CCO35_12725 NZ_NPME01000003.1 Protein Homology CDS 395392 396027 . - 0 ID=cds-WP_000626876.1;Parent=gene-CCO35_RS12740;Dbxref=GenBank:WP_000626876.1;Name=WP_000626876.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=CCO35_RS12740;product=arginine exporter ArgO;protein_id=WP_000626876.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 396228 397088 . - . ID=gene-CCO35_RS12745;Name=CCO35_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12745;old_locus_tag=CCO35_12730 NZ_NPME01000003.1 Protein Homology CDS 396228 397088 . - 0 ID=cds-WP_000389834.1;Parent=gene-CCO35_RS12745;Dbxref=GenBank:WP_000389834.1;Name=WP_000389834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=CCO35_RS12745;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389834.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 397311 398390 . - . ID=gene-CCO35_RS12750;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=CCO35_RS12750;old_locus_tag=CCO35_12735 NZ_NPME01000003.1 Protein Homology CDS 397311 398390 . - 0 ID=cds-WP_000034387.1;Parent=gene-CCO35_RS12750;Dbxref=GenBank:WP_000034387.1;Name=WP_000034387.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=CCO35_RS12750;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034387.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 398492 399655 . - . ID=gene-CCO35_RS12755;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CCO35_RS12755;old_locus_tag=CCO35_12740 NZ_NPME01000003.1 Protein Homology CDS 398492 399655 . - 0 ID=cds-WP_000111274.1;Parent=gene-CCO35_RS12755;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=CCO35_RS12755;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 399677 400723 . - . ID=gene-CCO35_RS12760;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=CCO35_RS12760;old_locus_tag=CCO35_12745 NZ_NPME01000003.1 Protein Homology CDS 399677 400723 . - 0 ID=cds-WP_000218329.1;Parent=gene-CCO35_RS12760;Dbxref=GenBank:WP_000218329.1;Name=WP_000218329.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=CCO35_RS12760;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218329.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 401097 401522 . + . ID=gene-CCO35_RS12770;Name=CCO35_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12770;old_locus_tag=CCO35_12755 NZ_NPME01000003.1 Protein Homology CDS 401097 401522 . + 0 ID=cds-WP_000637224.1;Parent=gene-CCO35_RS12770;Dbxref=GenBank:WP_000637224.1;Name=WP_000637224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=CCO35_RS12770;product=PPC domain-containing DNA-binding protein;protein_id=WP_000637224.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 401548 402126 . + . ID=gene-CCO35_RS12775;Name=CCO35_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12775;old_locus_tag=CCO35_12760 NZ_NPME01000003.1 Protein Homology CDS 401548 402126 . + 0 ID=cds-WP_000124004.1;Parent=gene-CCO35_RS12775;Dbxref=GenBank:WP_000124004.1;Name=WP_000124004.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=CCO35_RS12775;product=ECF transporter S component;protein_id=WP_000124004.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 402127 402834 . + . ID=gene-CCO35_RS12780;Name=CCO35_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12780;old_locus_tag=CCO35_12765 NZ_NPME01000003.1 Protein Homology CDS 402127 402834 . + 0 ID=cds-WP_000553264.1;Parent=gene-CCO35_RS12780;Dbxref=GenBank:WP_000553264.1;Name=WP_000553264.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=CCO35_RS12780;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_000553264.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 402822 403499 . + . ID=gene-CCO35_RS12785;Name=CCO35_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12785;old_locus_tag=CCO35_12770 NZ_NPME01000003.1 Protein Homology CDS 402822 403499 . + 0 ID=cds-WP_001520421.1;Parent=gene-CCO35_RS12785;Dbxref=GenBank:WP_001520421.1;Name=WP_001520421.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=CCO35_RS12785;product=ABC transporter ATP-binding protein;protein_id=WP_001520421.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 403493 404182 . + . ID=gene-CCO35_RS12790;Name=CCO35_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12790;old_locus_tag=CCO35_12775 NZ_NPME01000003.1 Protein Homology CDS 403493 404182 . + 0 ID=cds-WP_000956926.1;Parent=gene-CCO35_RS12790;Dbxref=GenBank:WP_000956926.1;Name=WP_000956926.1;Ontology_term=GO:0055085,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956937.1;locus_tag=CCO35_RS12790;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000956926.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 404151 404867 . - . ID=gene-CCO35_RS12795;Name=CCO35_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12795;old_locus_tag=CCO35_12780 NZ_NPME01000003.1 Protein Homology CDS 404151 404867 . - 0 ID=cds-WP_000684838.1;Parent=gene-CCO35_RS12795;Dbxref=GenBank:WP_000684838.1;Name=WP_000684838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406292.1;locus_tag=CCO35_RS12795;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000684838.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 404864 405373 . - . ID=gene-CCO35_RS12800;Name=CCO35_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12800;old_locus_tag=CCO35_12785 NZ_NPME01000003.1 Protein Homology CDS 404864 405373 . - 0 ID=cds-WP_000209974.1;Parent=gene-CCO35_RS12800;Dbxref=GenBank:WP_000209974.1;Name=WP_000209974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708693.1;locus_tag=CCO35_RS12800;product=MltR family transcriptional regulator;protein_id=WP_000209974.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 405587 406558 . - . ID=gene-CCO35_RS12805;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=CCO35_RS12805;old_locus_tag=CCO35_12790 NZ_NPME01000003.1 Protein Homology CDS 405587 406558 . - 0 ID=cds-WP_001519647.1;Parent=gene-CCO35_RS12805;Dbxref=GenBank:WP_001519647.1;Name=WP_001519647.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154382.1;locus_tag=CCO35_RS12805;product=class II fructose-bisphosphatase;protein_id=WP_001519647.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 406555 407829 . - . ID=gene-CCO35_RS12810;Name=CCO35_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12810;old_locus_tag=CCO35_12795 NZ_NPME01000003.1 Protein Homology CDS 406555 407829 . - 0 ID=cds-WP_000853171.1;Parent=gene-CCO35_RS12810;Dbxref=GenBank:WP_000853171.1;Name=WP_000853171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000853171.1;locus_tag=CCO35_RS12810;product=zinc-binding dehydrogenase;protein_id=WP_000853171.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 407853 409232 . - . ID=gene-CCO35_RS12815;Name=CCO35_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12815;old_locus_tag=CCO35_12800 NZ_NPME01000003.1 Protein Homology CDS 407853 409232 . - 0 ID=cds-WP_000400411.1;Parent=gene-CCO35_RS12815;Dbxref=GenBank:WP_000400411.1;Name=WP_000400411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400412.1;locus_tag=CCO35_RS12815;product=PTS mannitol transporter subunit IICB;protein_id=WP_000400411.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 409260 409703 . - . ID=gene-CCO35_RS12820;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=CCO35_RS12820;old_locus_tag=CCO35_12805 NZ_NPME01000003.1 Protein Homology CDS 409260 409703 . - 0 ID=cds-WP_001518319.1;Parent=gene-CCO35_RS12820;Dbxref=GenBank:WP_001518319.1;Name=WP_001518319.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518319.1;locus_tag=CCO35_RS12820;product=PTS mannitol transporter subunit IIA;protein_id=WP_001518319.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 410015 412006 . - . ID=gene-CCO35_RS12825;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO35_RS12825;old_locus_tag=CCO35_12810 NZ_NPME01000003.1 Protein Homology CDS 410015 412006 . - 0 ID=cds-WP_023136680.1;Parent=gene-CCO35_RS12825;Dbxref=GenBank:WP_023136680.1;Name=WP_023136680.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=CCO35_RS12825;product=transketolase;protein_id=WP_023136680.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 412282 413040 . + . ID=gene-CCO35_RS12830;Name=CCO35_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12830;old_locus_tag=CCO35_12815 NZ_NPME01000003.1 Protein Homology CDS 412282 413040 . + 0 ID=cds-WP_000701825.1;Parent=gene-CCO35_RS12830;Dbxref=GenBank:WP_000701825.1;Name=WP_000701825.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=CCO35_RS12830;product=M48 family metallopeptidase;protein_id=WP_000701825.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 413141 414061 . - . ID=gene-CCO35_RS12835;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=CCO35_RS12835;old_locus_tag=CCO35_12820 NZ_NPME01000003.1 Protein Homology CDS 413141 414061 . - 0 ID=cds-WP_000105549.1;Parent=gene-CCO35_RS12835;Dbxref=GenBank:WP_000105549.1;Name=WP_000105549.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=CCO35_RS12835;product=agmatinase;protein_id=WP_000105549.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 414290 416266 . - . ID=gene-CCO35_RS12840;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=CCO35_RS12840;old_locus_tag=CCO35_12825 NZ_NPME01000003.1 Protein Homology CDS 414290 416266 . - 0 ID=cds-WP_001278580.1;Parent=gene-CCO35_RS12840;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=CCO35_RS12840;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 416275 416406 . - . ID=gene-CCO35_RS12845;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=CCO35_RS12845;old_locus_tag=CCO35_12830 NZ_NPME01000003.1 Protein Homology CDS 416275 416406 . - 0 ID=cds-WP_000729109.1;Parent=gene-CCO35_RS12845;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=CCO35_RS12845;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 416492 416641 . - . ID=gene-CCO35_RS24195;Name=CCO35_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24195 NZ_NPME01000003.1 Protein Homology CDS 416492 416641 . - 0 ID=cds-WP_001751809.1;Parent=gene-CCO35_RS24195;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=CCO35_RS24195;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 416701 417000 . - . ID=gene-CCO35_RS12855;Name=CCO35_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12855;old_locus_tag=CCO35_12840 NZ_NPME01000003.1 GeneMarkS-2+ CDS 416701 417000 . - 0 ID=cds-WP_001543499.1;Parent=gene-CCO35_RS12855;Dbxref=GenBank:WP_001543499.1;Name=WP_001543499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS12855;product=hypothetical protein;protein_id=WP_001543499.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 417056 418210 . + . ID=gene-CCO35_RS12860;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CCO35_RS12860;old_locus_tag=CCO35_12845 NZ_NPME01000003.1 Protein Homology CDS 417056 418210 . + 0 ID=cds-WP_001062140.1;Parent=gene-CCO35_RS12860;Dbxref=GenBank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=CCO35_RS12860;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 418703 420097 . + . ID=gene-CCO35_RS12865;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=CCO35_RS12865;old_locus_tag=CCO35_12850 NZ_NPME01000003.1 Protein Homology CDS 418703 420097 . + 0 ID=cds-WP_001113171.1;Parent=gene-CCO35_RS12865;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=CCO35_RS12865;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 420176 420673 . + . ID=gene-CCO35_RS12870;Name=CCO35_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12870;old_locus_tag=CCO35_12855 NZ_NPME01000003.1 Protein Homology CDS 420176 420673 . + 0 ID=cds-WP_000856775.1;Parent=gene-CCO35_RS12870;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=CCO35_RS12870;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 420768 421475 . + . ID=gene-CCO35_RS12875;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=CCO35_RS12875;old_locus_tag=CCO35_12860 NZ_NPME01000003.1 Protein Homology CDS 420768 421475 . + 0 ID=cds-WP_000286123.1;Parent=gene-CCO35_RS12875;Dbxref=GenBank:WP_000286123.1;Name=WP_000286123.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=CCO35_RS12875;product=deoxyribonuclease I;protein_id=WP_000286123.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 421552 422283 . + . ID=gene-CCO35_RS12880;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=CCO35_RS12880;old_locus_tag=CCO35_12865 NZ_NPME01000003.1 Protein Homology CDS 421552 422283 . + 0 ID=cds-WP_001222488.1;Parent=gene-CCO35_RS12880;Dbxref=GenBank:WP_001222488.1;Name=WP_001222488.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=CCO35_RS12880;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222488.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 422303 423250 . + . ID=gene-CCO35_RS12885;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=CCO35_RS12885;old_locus_tag=CCO35_12870 NZ_NPME01000003.1 Protein Homology CDS 422303 423250 . + 0 ID=cds-WP_000593248.1;Parent=gene-CCO35_RS12885;Dbxref=GenBank:WP_000593248.1;Name=WP_000593248.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=CCO35_RS12885;product=glutathione synthase;protein_id=WP_000593248.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 423466 424029 . + . ID=gene-CCO35_RS12890;Name=CCO35_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12890;old_locus_tag=CCO35_12875 NZ_NPME01000003.1 Protein Homology CDS 423466 424029 . + 0 ID=cds-WP_001053167.1;Parent=gene-CCO35_RS12890;Dbxref=GenBank:WP_001053167.1;Name=WP_001053167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=CCO35_RS12890;product=YqgE/AlgH family protein;protein_id=WP_001053167.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 424029 424445 . + . ID=gene-CCO35_RS12895;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CCO35_RS12895;old_locus_tag=CCO35_12880 NZ_NPME01000003.1 Protein Homology CDS 424029 424445 . + 0 ID=cds-WP_001285491.1;Parent=gene-CCO35_RS12895;Dbxref=GenBank:WP_001285491.1;Name=WP_001285491.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=CCO35_RS12895;product=Holliday junction resolvase RuvX;protein_id=WP_001285491.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 424477 425178 . - . ID=gene-CCO35_RS12900;Name=CCO35_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12900;old_locus_tag=CCO35_12885 NZ_NPME01000003.1 Protein Homology CDS 424477 425178 . - 0 ID=cds-WP_000098340.1;Parent=gene-CCO35_RS12900;Dbxref=GenBank:WP_000098340.1;Name=WP_000098340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000098328.1;locus_tag=CCO35_RS12900;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_000098340.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 425310 426290 . - . ID=gene-CCO35_RS12905;Name=CCO35_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12905;old_locus_tag=CCO35_12890 NZ_NPME01000003.1 Protein Homology CDS 425310 426290 . - 0 ID=cds-WP_001055645.1;Parent=gene-CCO35_RS12905;Dbxref=GenBank:WP_001055645.1;Name=WP_001055645.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=CCO35_RS12905;product=type IV pilus twitching motility protein PilT;protein_id=WP_001055645.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 426308 427012 . + . ID=gene-CCO35_RS12910;Name=CCO35_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12910;old_locus_tag=CCO35_12895 NZ_NPME01000003.1 Protein Homology CDS 426308 427012 . + 0 ID=cds-WP_000997812.1;Parent=gene-CCO35_RS12910;Dbxref=GenBank:WP_000997812.1;Name=WP_000997812.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=CCO35_RS12910;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997812.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 427031 427597 . + . ID=gene-CCO35_RS12915;Name=CCO35_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12915;old_locus_tag=CCO35_12900 NZ_NPME01000003.1 Protein Homology CDS 427031 427597 . + 0 ID=cds-WP_001094851.1;Parent=gene-CCO35_RS12915;Dbxref=GenBank:WP_001094851.1;Name=WP_001094851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=CCO35_RS12915;product=YggT family protein;protein_id=WP_001094851.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 427594 427884 . + . ID=gene-CCO35_RS12920;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=CCO35_RS12920;old_locus_tag=CCO35_12905 NZ_NPME01000003.1 Protein Homology CDS 427594 427884 . + 0 ID=cds-WP_001277203.1;Parent=gene-CCO35_RS12920;Dbxref=GenBank:WP_001277203.1;Name=WP_001277203.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=CCO35_RS12920;product=DUF167 family protein YggU;protein_id=WP_001277203.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 427892 428485 . + . ID=gene-CCO35_RS12925;Name=CCO35_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12925;old_locus_tag=CCO35_12910 NZ_NPME01000003.1 Protein Homology CDS 427892 428485 . + 0 ID=cds-WP_001174769.1;Parent=gene-CCO35_RS12925;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=CCO35_RS12925;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 428478 429614 . + . ID=gene-CCO35_RS12930;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CCO35_RS12930;old_locus_tag=CCO35_12915 NZ_NPME01000003.1 Protein Homology CDS 428478 429614 . + 0 ID=cds-WP_094965352.1;Parent=gene-CCO35_RS12930;Dbxref=GenBank:WP_094965352.1;Name=WP_094965352.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=CCO35_RS12930;product=radical SAM family heme chaperone HemW;protein_id=WP_094965352.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 429706 430713 . - . ID=gene-CCO35_RS12935;Name=CCO35_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12935;old_locus_tag=CCO35_12920 NZ_NPME01000003.1 Protein Homology CDS 429706 430713 . - 0 ID=cds-WP_000252191.1;Parent=gene-CCO35_RS12935;Dbxref=GenBank:WP_000252191.1;Name=WP_000252191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=CCO35_RS12935;product=DUF1202 domain-containing protein;protein_id=WP_000252191.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 430846 431892 . - . ID=gene-CCO35_RS12940;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=CCO35_RS12940;old_locus_tag=CCO35_12925 NZ_NPME01000003.1 Protein Homology CDS 430846 431892 . - 0 ID=cds-WP_000394189.1;Parent=gene-CCO35_RS12940;Dbxref=GenBank:WP_000394189.1;Name=WP_000394189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=CCO35_RS12940;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 432081 432800 . - . ID=gene-CCO35_RS12945;Name=CCO35_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12945;old_locus_tag=CCO35_12930 NZ_NPME01000003.1 Protein Homology CDS 432081 432800 . - 0 ID=cds-WP_000984835.1;Parent=gene-CCO35_RS12945;Dbxref=GenBank:WP_000984835.1;Name=WP_000984835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=CCO35_RS12945;product=DUF2884 domain-containing protein;protein_id=WP_000984835.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 432850 433176 . - . ID=gene-CCO35_RS12950;Name=CCO35_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12950;old_locus_tag=CCO35_12935 NZ_NPME01000003.1 Protein Homology CDS 432850 433176 . - 0 ID=cds-WP_001107559.1;Parent=gene-CCO35_RS12950;Dbxref=GenBank:WP_001107559.1;Name=WP_001107559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=CCO35_RS12950;product=YggL family protein;protein_id=WP_001107559.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 433176 433895 . - . ID=gene-CCO35_RS12955;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CCO35_RS12955;old_locus_tag=CCO35_12940 NZ_NPME01000003.1 Protein Homology CDS 433176 433895 . - 0 ID=cds-WP_000786890.1;Parent=gene-CCO35_RS12955;Dbxref=GenBank:WP_000786890.1;Name=WP_000786890.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=CCO35_RS12955;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786890.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 434050 435102 . + . ID=gene-CCO35_RS12965;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CCO35_RS12965;old_locus_tag=CCO35_12950 NZ_NPME01000003.1 Protein Homology CDS 434050 435102 . + 0 ID=cds-WP_001148959.1;Parent=gene-CCO35_RS12965;Dbxref=GenBank:WP_001148959.1;Name=WP_001148959.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=CCO35_RS12965;product=A/G-specific adenine glycosylase;protein_id=WP_001148959.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 435130 435405 . + . ID=gene-CCO35_RS12970;Name=CCO35_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12970;old_locus_tag=CCO35_12955 NZ_NPME01000003.1 Protein Homology CDS 435130 435405 . + 0 ID=cds-WP_000091706.1;Parent=gene-CCO35_RS12970;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=CCO35_RS12970;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 435518 436603 . + . ID=gene-CCO35_RS12975;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=CCO35_RS12975;old_locus_tag=CCO35_12960 NZ_NPME01000003.1 Protein Homology CDS 435518 436603 . + 0 ID=cds-WP_000976289.1;Parent=gene-CCO35_RS12975;Dbxref=GenBank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=CCO35_RS12975;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 436820 438076 . + . ID=gene-CCO35_RS12980;Name=CCO35_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12980;old_locus_tag=CCO35_12965 NZ_NPME01000003.1 Protein Homology CDS 436820 438076 . + 0 ID=cds-WP_001049805.1;Parent=gene-CCO35_RS12980;Dbxref=GenBank:WP_001049805.1;Name=WP_001049805.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=CCO35_RS12980;product=nucleoside permease;protein_id=WP_001049805.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 438138 440273 . - . ID=gene-CCO35_RS12985;Name=CCO35_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12985;old_locus_tag=CCO35_12970 NZ_NPME01000003.1 Protein Homology CDS 438138 440273 . - 0 ID=cds-WP_000839721.1;Parent=gene-CCO35_RS12985;Dbxref=GenBank:WP_000839721.1;Name=WP_000839721.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=CCO35_RS12985;product=ornithine decarboxylase;protein_id=WP_000839721.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 440699 441406 . + . ID=gene-CCO35_RS12995;Name=CCO35_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS12995;old_locus_tag=CCO35_12980 NZ_NPME01000003.1 Protein Homology CDS 440699 441406 . + 0 ID=cds-WP_000234464.1;Parent=gene-CCO35_RS12995;Dbxref=GenBank:WP_000234464.1;Name=WP_000234464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=CCO35_RS12995;product=DUF554 domain-containing protein;protein_id=WP_000234464.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 441512 441587 . + . ID=gene-CCO35_RS13000;Name=CCO35_RS13000;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS13000;old_locus_tag=CCO35_12985 NZ_NPME01000003.1 tRNAscan-SE tRNA 441512 441587 . + . ID=rna-CCO35_RS13000;Parent=gene-CCO35_RS13000;anticodon=(pos:441545..441547);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS13000;product=tRNA-Phe NZ_NPME01000003.1 tRNAscan-SE exon 441512 441587 . + . ID=exon-CCO35_RS13000-1;Parent=rna-CCO35_RS13000;anticodon=(pos:441545..441547);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS13000;product=tRNA-Phe NZ_NPME01000003.1 RefSeq gene 441746 442126 . - . ID=gene-CCO35_RS13005;Name=CCO35_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13005;old_locus_tag=CCO35_12990 NZ_NPME01000003.1 Protein Homology CDS 441746 442126 . - 0 ID=cds-WP_000582672.1;Parent=gene-CCO35_RS13005;Dbxref=GenBank:WP_000582672.1;Name=WP_000582672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=CCO35_RS13005;product=VOC family protein;protein_id=WP_000582672.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 442191 443516 . - . ID=gene-CCO35_RS13010;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=CCO35_RS13010;old_locus_tag=CCO35_12995 NZ_NPME01000003.1 Protein Homology CDS 442191 443516 . - 0 ID=cds-WP_000982337.1;Parent=gene-CCO35_RS13010;Dbxref=GenBank:WP_000982337.1;Name=WP_000982337.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=CCO35_RS13010;product=itaconate CoA-transferase RipA/Ict;protein_id=WP_000982337.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 443541 444068 . - . ID=gene-CCO35_RS13015;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=CCO35_RS13015;old_locus_tag=CCO35_13000 NZ_NPME01000003.1 Protein Homology CDS 443541 444068 . - 0 ID=cds-WP_001094308.1;Parent=gene-CCO35_RS13015;Dbxref=GenBank:WP_001094308.1;Name=WP_001094308.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=CCO35_RS13015;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=WP_001094308.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 444092 444934 . - . ID=gene-CCO35_RS13020;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=CCO35_RS13020;old_locus_tag=CCO35_13005 NZ_NPME01000003.1 Protein Homology CDS 444092 444934 . - 0 ID=cds-WP_001112897.1;Parent=gene-CCO35_RS13020;Dbxref=GenBank:WP_001112897.1;Name=WP_001112897.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=CCO35_RS13020;product=itaconate degradation C-C-lyase RipC;protein_id=WP_001112897.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 445026 445904 . + . ID=gene-CCO35_RS13025;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=CCO35_RS13025;old_locus_tag=CCO35_13010 NZ_NPME01000003.1 Protein Homology CDS 445026 445904 . + 0 ID=cds-WP_000423178.1;Parent=gene-CCO35_RS13025;Dbxref=GenBank:WP_000423178.1;Name=WP_000423178.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=CCO35_RS13025;product=itaconate degradation transcriptional regulator RipR;protein_id=WP_000423178.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 445952 447691 . - . ID=gene-CCO35_RS13030;Name=CCO35_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13030;old_locus_tag=CCO35_13015 NZ_NPME01000003.1 Protein Homology CDS 445952 447691 . - 0 ID=cds-WP_000745171.1;Parent=gene-CCO35_RS13030;Dbxref=GenBank:WP_000745171.1;Name=WP_000745171.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=CCO35_RS13030;product=arylsulfatase;protein_id=WP_000745171.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 447760 448944 . - . ID=gene-CCO35_RS13035;Name=CCO35_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13035;old_locus_tag=CCO35_13020 NZ_NPME01000003.1 Protein Homology CDS 447760 448944 . - 0 ID=cds-WP_000933446.1;Parent=gene-CCO35_RS13035;Dbxref=GenBank:WP_000933446.1;Name=WP_000933446.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=CCO35_RS13035;product=anaerobic sulfatase maturase;protein_id=WP_000933446.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 449455 450138 . + . ID=gene-CCO35_RS13040;Name=CCO35_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13040;old_locus_tag=CCO35_13025 NZ_NPME01000003.1 Protein Homology CDS 449455 450138 . + 0 ID=cds-WP_001275356.1;Parent=gene-CCO35_RS13040;Dbxref=GenBank:WP_001275356.1;Name=WP_001275356.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=CCO35_RS13040;product=helix-turn-helix transcriptional regulator;protein_id=WP_001275356.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 450243 450800 . - . ID=gene-CCO35_RS13045;Name=CCO35_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13045;old_locus_tag=CCO35_13030 NZ_NPME01000003.1 Protein Homology CDS 450243 450800 . - 0 ID=cds-WP_000100109.1;Parent=gene-CCO35_RS13045;Dbxref=GenBank:WP_000100109.1;Name=WP_000100109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=CCO35_RS13045;product=DUF3156 family protein;protein_id=WP_000100109.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 450778 452277 . - . ID=gene-CCO35_RS13050;Name=CCO35_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13050;old_locus_tag=CCO35_13035 NZ_NPME01000003.1 Protein Homology CDS 450778 452277 . - 0 ID=cds-WP_000475960.1;Parent=gene-CCO35_RS13050;Dbxref=GenBank:WP_000475960.1;Name=WP_000475960.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=CCO35_RS13050;product=APC family permease;protein_id=WP_000475960.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 452486 452860 . - . ID=gene-CCO35_RS13055;Name=CCO35_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13055;old_locus_tag=CCO35_13040 NZ_NPME01000003.1 Protein Homology CDS 452486 452860 . - 0 ID=cds-WP_024154915.1;Parent=gene-CCO35_RS13055;Dbxref=GenBank:WP_024154915.1;Name=WP_024154915.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542983.1;locus_tag=CCO35_RS13055;product=cupin domain-containing protein;protein_id=WP_024154915.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 452875 454176 . - . ID=gene-CCO35_RS13060;Name=CCO35_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13060;old_locus_tag=CCO35_13045 NZ_NPME01000003.1 Protein Homology CDS 452875 454176 . - 0 ID=cds-WP_001092825.1;Parent=gene-CCO35_RS13060;Dbxref=GenBank:WP_001092825.1;Name=WP_001092825.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=CCO35_RS13060;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092825.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 454338 455822 . + . ID=gene-CCO35_RS13065;Name=CCO35_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13065;old_locus_tag=CCO35_13050 NZ_NPME01000003.1 Protein Homology CDS 454338 455822 . + 0 ID=cds-WP_031566609.1;Parent=gene-CCO35_RS13065;Dbxref=GenBank:WP_031566609.1;Name=WP_031566609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=CCO35_RS13065;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_031566609.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 455958 456338 . - . ID=gene-CCO35_RS13070;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=CCO35_RS13070;old_locus_tag=CCO35_13055 NZ_NPME01000003.1 Protein Homology CDS 455958 456338 . - 0 ID=cds-WP_001543513.1;Parent=gene-CCO35_RS13070;Dbxref=GenBank:WP_001543513.1;Name=WP_001543513.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=CCO35_RS13070;product=anti-adapter protein IraD;protein_id=WP_001543513.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 456338 456823 . - . ID=gene-CCO35_RS13075;Name=CCO35_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13075;old_locus_tag=CCO35_13060 NZ_NPME01000003.1 Protein Homology CDS 456338 456823 . - 0 ID=cds-WP_000338753.1;Parent=gene-CCO35_RS13075;Dbxref=GenBank:WP_000338753.1;Name=WP_000338753.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=CCO35_RS13075;product=Hcp family type VI secretion system effector;protein_id=WP_000338753.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 457549 458472 . - . ID=gene-CCO35_RS13080;Name=CCO35_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13080;old_locus_tag=CCO35_13065 NZ_NPME01000003.1 Protein Homology CDS 457549 458472 . - 0 ID=cds-WP_000540892.1;Parent=gene-CCO35_RS13080;Dbxref=GenBank:WP_000540892.1;Name=WP_000540892.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=CCO35_RS13080;product=polysaccharide deacetylase family protein;protein_id=WP_000540892.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 458511 459389 . - . ID=gene-CCO35_RS13085;Name=CCO35_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13085;old_locus_tag=CCO35_13070 NZ_NPME01000003.1 Protein Homology CDS 458511 459389 . - 0 ID=cds-WP_094965353.1;Parent=gene-CCO35_RS13085;Dbxref=GenBank:WP_094965353.1;Name=WP_094965353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=CCO35_RS13085;product=carbon-nitrogen hydrolase family protein;protein_id=WP_094965353.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 459702 460298 . - . ID=gene-CCO35_RS13090;Name=CCO35_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13090;old_locus_tag=CCO35_13075 NZ_NPME01000003.1 Protein Homology CDS 459702 460298 . - 0 ID=cds-WP_000428463.1;Parent=gene-CCO35_RS13090;Dbxref=GenBank:WP_000428463.1;Name=WP_000428463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000428407.1;locus_tag=CCO35_RS13090;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000428463.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 460673 462484 . + . ID=gene-CCO35_RS13095;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=CCO35_RS13095;old_locus_tag=CCO35_13080 NZ_NPME01000003.1 Protein Homology CDS 460673 462484 . + 0 ID=cds-WP_000945953.1;Parent=gene-CCO35_RS13095;Dbxref=GenBank:WP_000945953.1;Name=WP_000945953.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000945954.1;locus_tag=CCO35_RS13095;product=beta-glucuronidase;protein_id=WP_000945953.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 462481 463854 . + . ID=gene-CCO35_RS13100;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=CCO35_RS13100;old_locus_tag=CCO35_13085 NZ_NPME01000003.1 Protein Homology CDS 462481 463854 . + 0 ID=cds-WP_001075549.1;Parent=gene-CCO35_RS13100;Dbxref=GenBank:WP_001075549.1;Name=WP_001075549.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=CCO35_RS13100;product=glucuronide transporter;protein_id=WP_001075549.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 463890 465155 . + . ID=gene-CCO35_RS13105;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;locus_tag=CCO35_RS13105;old_locus_tag=CCO35_13090 NZ_NPME01000003.1 Protein Homology CDS 463890 465155 . + 0 ID=cds-WP_031566616.1;Parent=gene-CCO35_RS13105;Dbxref=GenBank:WP_031566616.1;Name=WP_031566616.1;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712677.1;locus_tag=CCO35_RS13105;product=glucuronide uptake porin UidC;protein_id=WP_031566616.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 465235 466539 . - . ID=gene-CCO35_RS13110;Name=CCO35_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13110;old_locus_tag=CCO35_13095 NZ_NPME01000003.1 Protein Homology CDS 465235 466539 . - 0 ID=cds-WP_000784371.1;Parent=gene-CCO35_RS13110;Dbxref=GenBank:WP_000784371.1;Name=WP_000784371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=CCO35_RS13110;product=MFS transporter;protein_id=WP_000784371.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 466944 468128 . + . ID=gene-CCO35_RS13120;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=CCO35_RS13120;old_locus_tag=CCO35_13105 NZ_NPME01000003.1 Protein Homology CDS 466944 468128 . + 0 ID=cds-WP_000815491.1;Parent=gene-CCO35_RS13120;Dbxref=GenBank:WP_000815491.1;Name=WP_000815491.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=CCO35_RS13120;product=mannonate dehydratase;protein_id=WP_000815491.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 468239 469711 . + . ID=gene-CCO35_RS13125;Name=CCO35_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13125;old_locus_tag=CCO35_13110 NZ_NPME01000003.1 Protein Homology CDS 468239 469711 . + 0 ID=cds-WP_000437125.1;Parent=gene-CCO35_RS13125;Dbxref=GenBank:WP_000437125.1;Name=WP_000437125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=CCO35_RS13125;product=fructuronate reductase;protein_id=WP_000437125.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 469723 471135 . + . ID=gene-CCO35_RS13130;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=CCO35_RS13130;old_locus_tag=CCO35_13115 NZ_NPME01000003.1 Protein Homology CDS 469723 471135 . + 0 ID=cds-WP_000190180.1;Parent=gene-CCO35_RS13130;Dbxref=GenBank:WP_000190180.1;Name=WP_000190180.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=CCO35_RS13130;product=glucuronate isomerase;protein_id=WP_000190180.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 471435 472490 . - . ID=gene-CCO35_RS13135;Name=CCO35_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13135;old_locus_tag=CCO35_13120 NZ_NPME01000003.1 Protein Homology CDS 471435 472490 . - 0 ID=cds-WP_000475255.1;Parent=gene-CCO35_RS13135;Dbxref=GenBank:WP_000475255.1;Name=WP_000475255.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=CCO35_RS13135;product=methyl-accepting chemotaxis protein;protein_id=WP_000475255.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 473160 475016 . - . ID=gene-CCO35_RS13145;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=CCO35_RS13145;old_locus_tag=CCO35_13130 NZ_NPME01000003.1 Protein Homology CDS 473160 475016 . - 0 ID=cds-WP_000033688.1;Parent=gene-CCO35_RS13145;Dbxref=GenBank:WP_000033688.1;Name=WP_000033688.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=CCO35_RS13145;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_000033688.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 475243 476109 . + . ID=gene-CCO35_RS13150;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=CCO35_RS13150;old_locus_tag=CCO35_13135 NZ_NPME01000003.1 Protein Homology CDS 475243 476109 . + 0 ID=cds-WP_000774852.1;Parent=gene-CCO35_RS13150;Dbxref=GenBank:WP_000774852.1;Name=WP_000774852.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=CCO35_RS13150;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_000774852.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 476177 476887 . - . ID=gene-CCO35_RS13155;Name=CCO35_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13155;old_locus_tag=CCO35_13140 NZ_NPME01000003.1 Protein Homology CDS 476177 476887 . - 0 ID=cds-WP_001613763.1;Parent=gene-CCO35_RS13155;Dbxref=GenBank:WP_001613763.1;Name=WP_001613763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=CCO35_RS13155;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001613763.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 476887 477939 . - . ID=gene-CCO35_RS13160;Name=CCO35_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13160;old_locus_tag=CCO35_13145 NZ_NPME01000003.1 Protein Homology CDS 476887 477939 . - 0 ID=cds-WP_001032024.1;Parent=gene-CCO35_RS13160;Dbxref=GenBank:WP_001032024.1;Name=WP_001032024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=CCO35_RS13160;product=ABC transporter substrate-binding protein;protein_id=WP_001032024.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 478015 478263 . - . ID=gene-CCO35_RS13165;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=CCO35_RS13165;old_locus_tag=CCO35_13150 NZ_NPME01000003.1 Protein Homology CDS 478015 478263 . - 0 ID=cds-WP_000334890.1;Parent=gene-CCO35_RS13165;Dbxref=GenBank:WP_000334890.1;Name=WP_000334890.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=CCO35_RS13165;product=hydrogenase maturation factor HybG;protein_id=WP_000334890.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 478291 478632 . - . ID=gene-CCO35_RS13170;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO35_RS13170;old_locus_tag=CCO35_13155 NZ_NPME01000003.1 Protein Homology CDS 478291 478632 . - 0 ID=cds-WP_000544945.1;Parent=gene-CCO35_RS13170;Dbxref=GenBank:WP_000544945.1;Name=WP_000544945.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=CCO35_RS13170;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544945.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 478625 479113 . - . ID=gene-CCO35_RS13175;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=CCO35_RS13175;old_locus_tag=CCO35_13160 NZ_NPME01000003.1 Protein Homology CDS 478625 479113 . - 0 ID=cds-WP_000004951.1;Parent=gene-CCO35_RS13175;Dbxref=GenBank:WP_000004951.1;Name=WP_000004951.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=CCO35_RS13175;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004951.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 479106 479600 . - . ID=gene-CCO35_RS13180;Name=CCO35_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13180;old_locus_tag=CCO35_13165 NZ_NPME01000003.1 Protein Homology CDS 479106 479600 . - 0 ID=cds-WP_001221960.1;Parent=gene-CCO35_RS13180;Dbxref=GenBank:WP_001221960.1;Name=WP_001221960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=CCO35_RS13180;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221960.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 479600 481303 . - . ID=gene-CCO35_RS13185;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=CCO35_RS13185;old_locus_tag=CCO35_13170 NZ_NPME01000003.1 Protein Homology CDS 479600 481303 . - 0 ID=cds-WP_000083045.1;Parent=gene-CCO35_RS13185;Dbxref=GenBank:WP_000083045.1;Name=WP_000083045.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=CCO35_RS13185;product=hydrogenase 2 large subunit;protein_id=WP_000083045.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 481300 482478 . - . ID=gene-CCO35_RS13190;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=CCO35_RS13190;old_locus_tag=CCO35_13175 NZ_NPME01000003.1 Protein Homology CDS 481300 482478 . - 0 ID=cds-WP_000017678.1;Parent=gene-CCO35_RS13190;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=CCO35_RS13190;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 482468 483454 . - . ID=gene-CCO35_RS13195;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=CCO35_RS13195;old_locus_tag=CCO35_13180 NZ_NPME01000003.1 Protein Homology CDS 482468 483454 . - 0 ID=cds-WP_001081721.1;Parent=gene-CCO35_RS13195;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=CCO35_RS13195;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 483457 484575 . - . ID=gene-CCO35_RS13200;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=CCO35_RS13200;old_locus_tag=CCO35_13185 NZ_NPME01000003.1 Protein Homology CDS 483457 484575 . - 0 ID=cds-WP_000145429.1;Parent=gene-CCO35_RS13200;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=CCO35_RS13200;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 484765 485052 . - . ID=gene-CCO35_RS13210;Name=CCO35_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13210;old_locus_tag=CCO35_13195 NZ_NPME01000003.1 Protein Homology CDS 484765 485052 . - 0 ID=cds-WP_001059119.1;Parent=gene-CCO35_RS13210;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=CCO35_RS13210;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 485137 486780 . - . ID=gene-CCO35_RS13215;Name=CCO35_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13215;old_locus_tag=CCO35_13200 NZ_NPME01000003.1 Protein Homology CDS 485137 486780 . - 0 ID=cds-WP_001238427.1;Parent=gene-CCO35_RS13215;Dbxref=GenBank:WP_001238427.1;Name=WP_001238427.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=CCO35_RS13215;product=methyl-accepting chemotaxis protein;protein_id=WP_001238427.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 487087 487581 . - . ID=gene-CCO35_RS13220;Name=CCO35_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13220;old_locus_tag=CCO35_13205 NZ_NPME01000003.1 Protein Homology CDS 487087 487581 . - 0 ID=cds-WP_000439335.1;Parent=gene-CCO35_RS13220;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=CCO35_RS13220;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 487799 488302 . - . ID=gene-CCO35_RS13225;Name=CCO35_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13225;old_locus_tag=CCO35_13210 NZ_NPME01000003.1 Protein Homology CDS 487799 488302 . - 0 ID=cds-WP_001084409.1;Parent=gene-CCO35_RS13225;Dbxref=GenBank:WP_001084409.1;Name=WP_001084409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=CCO35_RS13225;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001084409.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 488406 488816 . + . ID=gene-CCO35_RS13230;Name=CCO35_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13230;old_locus_tag=CCO35_13215 NZ_NPME01000003.1 Protein Homology CDS 488406 488816 . + 0 ID=cds-WP_000936443.1;Parent=gene-CCO35_RS13230;Dbxref=GenBank:WP_000936443.1;Name=WP_000936443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=CCO35_RS13230;product=hypothetical protein;protein_id=WP_000936443.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 488803 489207 . + . ID=gene-CCO35_RS13235;Name=CCO35_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13235;old_locus_tag=CCO35_13220 NZ_NPME01000003.1 Protein Homology CDS 488803 489207 . + 0 ID=cds-WP_000665657.1;Parent=gene-CCO35_RS13235;Dbxref=GenBank:WP_000665657.1;Name=WP_000665657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=CCO35_RS13235;product=hypothetical protein;protein_id=WP_000665657.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 489331 490215 . + . ID=gene-CCO35_RS13240;Name=CCO35_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13240;old_locus_tag=CCO35_13225 NZ_NPME01000003.1 Protein Homology CDS 489331 490215 . + 0 ID=cds-WP_000019037.1;Parent=gene-CCO35_RS13240;Dbxref=GenBank:WP_000019037.1;Name=WP_000019037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=CCO35_RS13240;product=SDR family oxidoreductase;protein_id=WP_000019037.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 490328 490753 . - . ID=gene-CCO35_RS13245;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=CCO35_RS13245;old_locus_tag=CCO35_13230 NZ_NPME01000003.1 Protein Homology CDS 490328 490753 . - 0 ID=cds-WP_001527939.1;Parent=gene-CCO35_RS13245;Dbxref=GenBank:WP_001527939.1;Name=WP_001527939.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=CCO35_RS13245;product=TonB system transport protein ExbD;protein_id=WP_001527939.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 490760 491494 . - . ID=gene-CCO35_RS13250;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=CCO35_RS13250;old_locus_tag=CCO35_13235 NZ_NPME01000003.1 Protein Homology CDS 490760 491494 . - 0 ID=cds-WP_031566638.1;Parent=gene-CCO35_RS13250;Dbxref=GenBank:WP_031566638.1;Name=WP_031566638.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=CCO35_RS13250;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_031566638.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 491746 492933 . + . ID=gene-CCO35_RS13260;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CCO35_RS13260;old_locus_tag=CCO35_13245 NZ_NPME01000003.1 Protein Homology CDS 491746 492933 . + 0 ID=cds-WP_000130270.1;Parent=gene-CCO35_RS13260;Dbxref=GenBank:WP_000130270.1;Name=WP_000130270.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=CCO35_RS13260;product=cystathionine beta-lyase;protein_id=WP_000130270.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 493073 493732 . + . ID=gene-CCO35_RS13265;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=CCO35_RS13265;old_locus_tag=CCO35_13250 NZ_NPME01000003.1 Protein Homology CDS 493073 493732 . + 0 ID=cds-WP_000268441.1;Parent=gene-CCO35_RS13265;Dbxref=GenBank:WP_000268441.1;Name=WP_000268441.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=CCO35_RS13265;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268441.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 493796 494695 . - . ID=gene-CCO35_RS13270;Name=CCO35_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13270;old_locus_tag=CCO35_13255 NZ_NPME01000003.1 Protein Homology CDS 493796 494695 . - 0 ID=cds-WP_001078198.1;Parent=gene-CCO35_RS13270;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=CCO35_RS13270;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 494888 496051 . + . ID=gene-CCO35_RS13275;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=CCO35_RS13275;old_locus_tag=CCO35_13260 NZ_NPME01000003.1 Protein Homology CDS 494888 496051 . + 0 ID=cds-WP_001058720.1;Parent=gene-CCO35_RS13275;Dbxref=GenBank:WP_001058720.1;Name=WP_001058720.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=CCO35_RS13275;product=alcohol dehydrogenase;protein_id=WP_001058720.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 496157 496984 . + . ID=gene-CCO35_RS13280;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=CCO35_RS13280;old_locus_tag=CCO35_13265 NZ_NPME01000003.1 Protein Homology CDS 496157 496984 . + 0 ID=cds-WP_000013100.1;Parent=gene-CCO35_RS13280;Dbxref=GenBank:WP_000013100.1;Name=WP_000013100.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=CCO35_RS13280;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013100.1;transl_table=11 NZ_NPME01000003.1 RefSeq pseudogene 497150 498635 . + . ID=gene-CCO35_RS13285;Name=CCO35_RS13285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS13285;old_locus_tag=CCO35_13270;pseudo=true NZ_NPME01000003.1 Protein Homology CDS 497150 498635 . + 0 ID=cds-CCO35_RS13285;Parent=gene-CCO35_RS13285;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=CCO35_RS13285;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 NZ_NPME01000003.1 RefSeq gene 498776 499684 . + . ID=gene-CCO35_RS13290;Name=CCO35_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13290;old_locus_tag=CCO35_13275 NZ_NPME01000003.1 Protein Homology CDS 498776 499684 . + 0 ID=cds-WP_000649287.1;Parent=gene-CCO35_RS13290;Dbxref=GenBank:WP_000649287.1;Name=WP_000649287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000649288.1;locus_tag=CCO35_RS13290;product=hypothetical protein;protein_id=WP_000649287.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 499739 500791 . + . ID=gene-CCO35_RS13295;Name=CCO35_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13295;old_locus_tag=CCO35_13280 NZ_NPME01000003.1 Protein Homology CDS 499739 500791 . + 0 ID=cds-WP_000680458.1;Parent=gene-CCO35_RS13295;Dbxref=GenBank:WP_000680458.1;Name=WP_000680458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680564.1;locus_tag=CCO35_RS13295;product=DUF3828 domain-containing protein;protein_id=WP_000680458.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 500821 501063 . + . ID=gene-CCO35_RS13300;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=CCO35_RS13300;old_locus_tag=CCO35_13285 NZ_NPME01000003.1 Protein Homology CDS 500821 501063 . + 0 ID=cds-WP_229578409.1;Parent=gene-CCO35_RS13300;Dbxref=GenBank:WP_229578409.1;Name=WP_229578409.1;gbkey=CDS;gene=yqhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417487.1;locus_tag=CCO35_RS13300;product=lipoprotein YqhH;protein_id=WP_229578409.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 501189 502895 . + . ID=gene-CCO35_RS13305;Name=CCO35_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13305;old_locus_tag=CCO35_13290 NZ_NPME01000003.1 Protein Homology CDS 501189 502895 . + 0 ID=cds-WP_000214883.1;Parent=gene-CCO35_RS13305;Dbxref=GenBank:WP_000214883.1;Name=WP_000214883.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214883.1;locus_tag=CCO35_RS13305;product=amidohydrolase;protein_id=WP_000214883.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 502892 504037 . + . ID=gene-CCO35_RS13310;Name=CCO35_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13310;old_locus_tag=CCO35_13295 NZ_NPME01000003.1 Protein Homology CDS 502892 504037 . + 0 ID=cds-WP_000643576.1;Parent=gene-CCO35_RS13310;Dbxref=GenBank:WP_000643576.1;Name=WP_000643576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000643576.1;locus_tag=CCO35_RS13310;product=hypothetical protein;protein_id=WP_000643576.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 504143 504916 . + . ID=gene-CCO35_RS13315;Name=CCO35_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13315;old_locus_tag=CCO35_13300 NZ_NPME01000003.1 Protein Homology CDS 504143 504916 . + 0 ID=cds-WP_223617439.1;Parent=gene-CCO35_RS13315;Dbxref=GenBank:WP_223617439.1;Name=WP_223617439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663001.1;locus_tag=CCO35_RS13315;product=hypothetical protein;protein_id=WP_223617439.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 505056 505304 . + . ID=gene-CCO35_RS13320;Name=CCO35_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13320;old_locus_tag=CCO35_13305 NZ_NPME01000003.1 Protein Homology CDS 505056 505304 . + 0 ID=cds-WP_000823890.1;Parent=gene-CCO35_RS13320;Dbxref=GenBank:WP_000823890.1;Name=WP_000823890.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727588.1;locus_tag=CCO35_RS13320;product=LPP leucine zipper domain-containing protein;protein_id=WP_000823890.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 505392 505622 . + . ID=gene-CCO35_RS13325;Name=CCO35_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13325;old_locus_tag=CCO35_13310 NZ_NPME01000003.1 Protein Homology CDS 505392 505622 . + 0 ID=cds-WP_001044026.1;Parent=gene-CCO35_RS13325;Dbxref=GenBank:WP_001044026.1;Name=WP_001044026.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044026.1;locus_tag=CCO35_RS13325;product=LPP leucine zipper domain-containing protein;protein_id=WP_001044026.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 505660 507879 . - . ID=gene-CCO35_RS13330;Name=CCO35_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13330;old_locus_tag=CCO35_13315 NZ_NPME01000003.1 Protein Homology CDS 505660 507879 . - 0 ID=cds-WP_001274471.1;Parent=gene-CCO35_RS13330;Dbxref=GenBank:WP_001274471.1;Name=WP_001274471.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026196.1;locus_tag=CCO35_RS13330;product=YgiQ family radical SAM protein;protein_id=WP_001274471.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 508013 508900 . - . ID=gene-CCO35_RS24065;Name=CCO35_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24065 NZ_NPME01000003.1 Protein Homology CDS 508013 508900 . - 0 ID=cds-WP_001613842.1;Parent=gene-CCO35_RS24065;Dbxref=GenBank:WP_001613842.1;Name=WP_001613842.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024704.6;locus_tag=CCO35_RS24065;product=YARHG domain-containing protein;protein_id=WP_001613842.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 508916 509434 . - . ID=gene-CCO35_RS24070;Name=CCO35_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24070 NZ_NPME01000003.1 Protein Homology CDS 508916 509434 . - 0 ID=cds-WP_000710524.1;Parent=gene-CCO35_RS24070;Dbxref=GenBank:WP_000710524.1;Name=WP_000710524.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026024.6;locus_tag=CCO35_RS24070;product=DUF4459 domain-containing protein;protein_id=WP_000710524.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 509499 510923 . - . ID=gene-CCO35_RS13340;Name=CCO35_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13340;old_locus_tag=CCO35_13325 NZ_NPME01000003.1 Protein Homology CDS 509499 510923 . - 0 ID=cds-WP_000384556.1;Parent=gene-CCO35_RS13340;Dbxref=GenBank:WP_000384556.1;Name=WP_000384556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384560.1;locus_tag=CCO35_RS13340;product=hypothetical protein;protein_id=WP_000384556.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 510939 511844 . - . ID=gene-CCO35_RS24240;Name=CCO35_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24240 NZ_NPME01000003.1 Protein Homology CDS 510939 511844 . - 0 ID=cds-WP_306294178.1;Parent=gene-CCO35_RS24240;Dbxref=GenBank:WP_306294178.1;Name=WP_306294178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269658.1;locus_tag=CCO35_RS24240;product=hypothetical protein;protein_id=WP_306294178.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 512756 513388 . - . ID=gene-CCO35_RS13350;Name=CCO35_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13350;old_locus_tag=CCO35_13335 NZ_NPME01000003.1 GeneMarkS-2+ CDS 512756 513388 . - 0 ID=cds-WP_001613851.1;Parent=gene-CCO35_RS13350;Dbxref=GenBank:WP_001613851.1;Name=WP_001613851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS13350;product=hypothetical protein;protein_id=WP_001613851.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 513429 514841 . - . ID=gene-CCO35_RS13355;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=CCO35_RS13355;old_locus_tag=CCO35_13340 NZ_NPME01000003.1 Protein Homology CDS 513429 514841 . - 0 ID=cds-WP_000010658.1;Parent=gene-CCO35_RS13355;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=CCO35_RS13355;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 514915 515652 . - . ID=gene-CCO35_RS13360;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=CCO35_RS13360;old_locus_tag=CCO35_13345 NZ_NPME01000003.1 Protein Homology CDS 514915 515652 . - 0 ID=cds-WP_000965733.1;Parent=gene-CCO35_RS13360;Dbxref=GenBank:WP_000965733.1;Name=WP_000965733.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=CCO35_RS13360;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965733.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 515909 518167 . - . ID=gene-CCO35_RS13365;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CCO35_RS13365;old_locus_tag=CCO35_13350 NZ_NPME01000003.1 Protein Homology CDS 515909 518167 . - 0 ID=cds-WP_001281857.1;Parent=gene-CCO35_RS13365;Dbxref=GenBank:WP_001281857.1;Name=WP_001281857.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=CCO35_RS13365;product=DNA topoisomerase IV subunit A;protein_id=WP_001281857.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 518278 519144 . - . ID=gene-CCO35_RS13370;Name=CCO35_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13370;old_locus_tag=CCO35_13355 NZ_NPME01000003.1 Protein Homology CDS 518278 519144 . - 0 ID=cds-WP_000998790.1;Parent=gene-CCO35_RS13370;Dbxref=GenBank:WP_000998790.1;Name=WP_000998790.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=CCO35_RS13370;product=AraC family transcriptional regulator;protein_id=WP_000998790.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 519216 519608 . - . ID=gene-CCO35_RS13375;Name=CCO35_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13375;old_locus_tag=CCO35_13360 NZ_NPME01000003.1 Protein Homology CDS 519216 519608 . - 0 ID=cds-WP_000731552.1;Parent=gene-CCO35_RS13375;Dbxref=GenBank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=CCO35_RS13375;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 519760 520419 . + . ID=gene-CCO35_RS13380;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=CCO35_RS13380;old_locus_tag=CCO35_13365 NZ_NPME01000003.1 Protein Homology CDS 519760 520419 . + 0 ID=cds-WP_001221574.1;Parent=gene-CCO35_RS13380;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=CCO35_RS13380;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 520416 521765 . + . ID=gene-CCO35_RS13385;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=CCO35_RS13385;old_locus_tag=CCO35_13370 NZ_NPME01000003.1 Protein Homology CDS 520416 521765 . + 0 ID=cds-WP_000779333.1;Parent=gene-CCO35_RS13385;Dbxref=GenBank:WP_000779333.1;Name=WP_000779333.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=CCO35_RS13385;product=quorum sensing histidine kinase QseC;protein_id=WP_000779333.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 521872 522453 . + . ID=gene-CCO35_RS13390;Name=CCO35_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13390;old_locus_tag=CCO35_13375 NZ_NPME01000003.1 Protein Homology CDS 521872 522453 . + 0 ID=cds-WP_000065416.1;Parent=gene-CCO35_RS13390;Dbxref=GenBank:WP_000065416.1;Name=WP_000065416.1;Ontology_term=GO:0008753,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=CCO35_RS13390;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065416.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 522485 522799 . + . ID=gene-CCO35_RS13395;Name=CCO35_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13395;old_locus_tag=CCO35_13380 NZ_NPME01000003.1 Protein Homology CDS 522485 522799 . + 0 ID=cds-WP_000958587.1;Parent=gene-CCO35_RS13395;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=CCO35_RS13395;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 522924 524816 . - . ID=gene-CCO35_RS13400;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CCO35_RS13400;old_locus_tag=CCO35_13385 NZ_NPME01000003.1 Protein Homology CDS 522924 524816 . - 0 ID=cds-WP_023262778.1;Parent=gene-CCO35_RS13400;Dbxref=GenBank:WP_023262778.1;Name=WP_023262778.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=CCO35_RS13400;product=DNA topoisomerase IV subunit B;protein_id=WP_023262778.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 524844 525425 . - . ID=gene-CCO35_RS13405;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=CCO35_RS13405;old_locus_tag=CCO35_13390 NZ_NPME01000003.1 Protein Homology CDS 524844 525425 . - 0 ID=cds-WP_000105725.1;Parent=gene-CCO35_RS13405;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=CCO35_RS13405;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 525425 526252 . - . ID=gene-CCO35_RS13410;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=CCO35_RS13410;old_locus_tag=CCO35_13395 NZ_NPME01000003.1 Protein Homology CDS 525425 526252 . - 0 ID=cds-WP_000444735.1;Parent=gene-CCO35_RS13410;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=CCO35_RS13410;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 526277 526699 . - . ID=gene-CCO35_RS13415;Name=CCO35_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13415;old_locus_tag=CCO35_13400 NZ_NPME01000003.1 Protein Homology CDS 526277 526699 . - 0 ID=cds-WP_000833404.1;Parent=gene-CCO35_RS13415;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=CCO35_RS13415;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 526696 527328 . - . ID=gene-CCO35_RS13420;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=CCO35_RS13420;old_locus_tag=CCO35_13405 NZ_NPME01000003.1 Protein Homology CDS 526696 527328 . - 0 ID=cds-WP_001231950.1;Parent=gene-CCO35_RS13420;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=CCO35_RS13420;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 527529 529004 . + . ID=gene-CCO35_RS13425;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=CCO35_RS13425;old_locus_tag=CCO35_13410 NZ_NPME01000003.1 Protein Homology CDS 527529 529004 . + 0 ID=cds-WP_001663008.1;Parent=gene-CCO35_RS13425;Dbxref=GenBank:WP_001663008.1;Name=WP_001663008.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=CCO35_RS13425;product=outer membrane channel protein TolC;protein_id=WP_001663008.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 529217 529888 . + . ID=gene-CCO35_RS13435;Name=CCO35_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13435;old_locus_tag=CCO35_13420 NZ_NPME01000003.1 Protein Homology CDS 529217 529888 . + 0 ID=cds-WP_000831528.1;Parent=gene-CCO35_RS13435;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=CCO35_RS13435;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 529894 531057 . + . ID=gene-CCO35_RS13440;Name=CCO35_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13440;old_locus_tag=CCO35_13425 NZ_NPME01000003.1 Protein Homology CDS 529894 531057 . + 0 ID=cds-WP_000442833.1;Parent=gene-CCO35_RS13440;Dbxref=GenBank:WP_000442833.1;Name=WP_000442833.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=CCO35_RS13440;product=glutathionylspermidine synthase family protein;protein_id=WP_000442833.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 531119 531907 . - . ID=gene-CCO35_RS13445;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=CCO35_RS13445;old_locus_tag=CCO35_13430 NZ_NPME01000003.1 Protein Homology CDS 531119 531907 . - 0 ID=cds-WP_001520560.1;Parent=gene-CCO35_RS13445;Dbxref=GenBank:WP_001520560.1;Name=WP_001520560.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=CCO35_RS13445;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001520560.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 532048 532821 . + . ID=gene-CCO35_RS13450;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=CCO35_RS13450;old_locus_tag=CCO35_13435 NZ_NPME01000003.1 Protein Homology CDS 532048 532821 . + 0 ID=cds-WP_000115874.1;Parent=gene-CCO35_RS13450;Dbxref=GenBank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=CCO35_RS13450;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 532888 533064 . - . ID=gene-CCO35_RS24200;Name=CCO35_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24200;old_locus_tag=CCO35_13440 NZ_NPME01000003.1 Protein Homology CDS 532888 533064 . - 0 ID=cds-WP_000469257.1;Parent=gene-CCO35_RS24200;Dbxref=GenBank:WP_000469257.1;Name=WP_000469257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=CCO35_RS24200;product=hypothetical protein;protein_id=WP_000469257.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 533464 535260 . + . ID=gene-CCO35_RS13460;Name=CCO35_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13460;old_locus_tag=CCO35_13445 NZ_NPME01000003.1 Protein Homology CDS 533464 535260 . + 0 ID=cds-WP_000460265.1;Parent=gene-CCO35_RS13460;Dbxref=GenBank:WP_000460265.1;Name=WP_000460265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=CCO35_RS13460;product=aryl-sulfate sulfotransferase;protein_id=WP_000460265.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 535280 535951 . + . ID=gene-CCO35_RS13465;Name=CCO35_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13465;old_locus_tag=CCO35_13450 NZ_NPME01000003.1 Protein Homology CDS 535280 535951 . + 0 ID=cds-WP_000096230.1;Parent=gene-CCO35_RS13465;Dbxref=GenBank:WP_000096230.1;Name=WP_000096230.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=CCO35_RS13465;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096230.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 535966 536643 . + . ID=gene-CCO35_RS13470;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=CCO35_RS13470;old_locus_tag=CCO35_13455 NZ_NPME01000003.1 Protein Homology CDS 535966 536643 . + 0 ID=cds-WP_000345576.1;Parent=gene-CCO35_RS13470;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=CCO35_RS13470;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 536814 537467 . - . ID=gene-CCO35_RS13475;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=CCO35_RS13475;old_locus_tag=CCO35_13460 NZ_NPME01000003.1 Protein Homology CDS 536814 537467 . - 0 ID=cds-WP_001076978.1;Parent=gene-CCO35_RS13475;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=CCO35_RS13475;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11 NZ_NPME01000003.1 cmsearch riboswitch 537573 537771 . - . ID=id-NZ_NPME01000003.1:537573..537771;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPME01000003.1 RefSeq gene 537904 538200 . + . ID=gene-CCO35_RS13480;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=CCO35_RS13480;old_locus_tag=CCO35_13465 NZ_NPME01000003.1 Protein Homology CDS 537904 538200 . + 0 ID=cds-WP_000566824.1;Parent=gene-CCO35_RS13480;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=CCO35_RS13480;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 538274 538483 . - . ID=gene-CCO35_RS13485;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=CCO35_RS13485;old_locus_tag=CCO35_13470 NZ_NPME01000003.1 Protein Homology CDS 538274 538483 . - 0 ID=cds-WP_000928927.1;Parent=gene-CCO35_RS13485;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=CCO35_RS13485;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 538741 539361 . + . ID=gene-CCO35_RS13490;Name=CCO35_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13490;old_locus_tag=CCO35_13475 NZ_NPME01000003.1 Protein Homology CDS 538741 539361 . + 0 ID=cds-WP_000171744.1;Parent=gene-CCO35_RS13490;Dbxref=GenBank:WP_000171744.1;Name=WP_000171744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=CCO35_RS13490;product=OB-fold-containig protein;protein_id=WP_000171744.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 539380 541059 . + . ID=gene-CCO35_RS13495;Name=CCO35_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13495;old_locus_tag=CCO35_13480 NZ_NPME01000003.1 Protein Homology CDS 539380 541059 . + 0 ID=cds-WP_031566695.1;Parent=gene-CCO35_RS13495;Dbxref=GenBank:WP_031566695.1;Name=WP_031566695.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=CCO35_RS13495;product=flotillin family protein;protein_id=WP_031566695.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 541298 541357 . + . ID=gene-CCO35_RS23880;Name=CCO35_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23880 NZ_NPME01000003.1 Protein Homology CDS 541298 541357 . + 0 ID=cds-WP_001804776.1;Parent=gene-CCO35_RS23880;Dbxref=GenBank:WP_001804776.1;Name=WP_001804776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=CCO35_RS23880;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001804776.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 541517 542950 . - . ID=gene-CCO35_RS13505;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=CCO35_RS13505;old_locus_tag=CCO35_13490 NZ_NPME01000003.1 Protein Homology CDS 541517 542950 . - 0 ID=cds-WP_031566698.1;Parent=gene-CCO35_RS13505;Dbxref=GenBank:WP_031566698.1;Name=WP_031566698.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=CCO35_RS13505;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_031566698.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 542998 545841 . - . ID=gene-CCO35_RS13510;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=CCO35_RS13510;old_locus_tag=CCO35_13495 NZ_NPME01000003.1 Protein Homology CDS 542998 545841 . - 0 ID=cds-WP_031566702.1;Parent=gene-CCO35_RS13510;Dbxref=GenBank:WP_031566702.1;Name=WP_031566702.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=CCO35_RS13510;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_031566702.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 545959 547260 . - . ID=gene-CCO35_RS13515;Name=CCO35_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13515;old_locus_tag=CCO35_13500 NZ_NPME01000003.1 Protein Homology CDS 545959 547260 . - 0 ID=cds-WP_000046223.1;Parent=gene-CCO35_RS13515;Dbxref=GenBank:WP_000046223.1;Name=WP_000046223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=CCO35_RS13515;product=inorganic triphosphatase;protein_id=WP_000046223.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 547502 548116 . + . ID=gene-CCO35_RS13520;Name=CCO35_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13520;old_locus_tag=CCO35_13510 NZ_NPME01000003.1 Protein Homology CDS 547502 548116 . + 0 ID=cds-WP_001125344.1;Parent=gene-CCO35_RS13520;Dbxref=GenBank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=CCO35_RS13520;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 548179 549420 . + . ID=gene-CCO35_RS13525;Name=CCO35_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13525;old_locus_tag=CCO35_13515 NZ_NPME01000003.1 Protein Homology CDS 548179 549420 . + 0 ID=cds-WP_000708454.1;Parent=gene-CCO35_RS13525;Dbxref=GenBank:WP_000708454.1;Name=WP_000708454.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=CCO35_RS13525;product=multifunctional CCA addition/repair protein;protein_id=WP_000708454.1;transl_table=11 NZ_NPME01000003.1 RefSeq pseudogene 549441 549525 . + . ID=gene-CCO35_RS24350;Name=CCO35_RS24350;end_range=549525,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24350;partial=true;pseudo=true;start_range=.,549441 NZ_NPME01000003.1 Protein Homology CDS 549441 549525 . + 0 ID=cds-CCO35_RS24350;Parent=gene-CCO35_RS24350;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=549525,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO35_RS24350;partial=true;product=hypothetical protein;pseudo=true;start_range=.,549441;transl_table=11 NZ_NPME01000003.1 RefSeq gene 549524 550345 . - . ID=gene-CCO35_RS13530;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=CCO35_RS13530;old_locus_tag=CCO35_13520 NZ_NPME01000003.1 Protein Homology CDS 549524 550345 . - 0 ID=cds-WP_001281933.1;Parent=gene-CCO35_RS13530;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=CCO35_RS13530;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 550443 550802 . - . ID=gene-CCO35_RS13535;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CCO35_RS13535;old_locus_tag=CCO35_13525 NZ_NPME01000003.1 Protein Homology CDS 550443 550802 . - 0 ID=cds-WP_000355776.1;Parent=gene-CCO35_RS13535;Dbxref=GenBank:WP_000355776.1;Name=WP_000355776.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=CCO35_RS13535;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_000355776.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 550909 551526 . + . ID=gene-CCO35_RS13540;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CCO35_RS13540;old_locus_tag=CCO35_13530 NZ_NPME01000003.1 Protein Homology CDS 550909 551526 . + 0 ID=cds-WP_001272785.1;Parent=gene-CCO35_RS13540;Dbxref=GenBank:WP_001272785.1;Name=WP_001272785.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272785.1;locus_tag=CCO35_RS13540;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272785.1;transl_table=11 NZ_NPME01000003.1 RefSeq pseudogene 551564 551626 . + . ID=gene-CCO35_RS24075;Name=CCO35_RS24075;end_range=551626,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24075;partial=true;pseudo=true;start_range=.,551564 NZ_NPME01000003.1 Protein Homology CDS 551564 551626 . + 0 ID=cds-CCO35_RS24075;Parent=gene-CCO35_RS24075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=551626,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=CCO35_RS24075;partial=true;product=hypothetical protein;pseudo=true;start_range=.,551564;transl_table=11 NZ_NPME01000003.1 RefSeq gene 551750 552763 . - . ID=gene-CCO35_RS13550;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CCO35_RS13550;old_locus_tag=CCO35_13540 NZ_NPME01000003.1 Protein Homology CDS 551750 552763 . - 0 ID=cds-WP_001264396.1;Parent=gene-CCO35_RS13550;Dbxref=GenBank:WP_001264396.1;Name=WP_001264396.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=CCO35_RS13550;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264396.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 552991 553206 . + . ID=gene-CCO35_RS13555;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CCO35_RS13555;old_locus_tag=CCO35_13545 NZ_NPME01000003.1 Protein Homology CDS 552991 553206 . + 0 ID=cds-WP_001144069.1;Parent=gene-CCO35_RS13555;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=CCO35_RS13555;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 553442 555187 . + . ID=gene-CCO35_RS13560;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CCO35_RS13560;old_locus_tag=CCO35_13550 NZ_NPME01000003.1 Protein Homology CDS 553442 555187 . + 0 ID=cds-WP_000918865.1;Parent=gene-CCO35_RS13560;Dbxref=GenBank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=CCO35_RS13560;product=DNA primase;protein_id=WP_000918865.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 555202 557184 . + . ID=gene-CCO35_RS13565;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CCO35_RS13565;old_locus_tag=CCO35_13555 NZ_NPME01000003.1 Protein Homology CDS 555202 557184 . + 0 ID=cds-WP_001120159.1;Parent=gene-CCO35_RS13565;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=CCO35_RS13565;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 557308 557814 . - . ID=gene-CCO35_RS13570;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=CCO35_RS13570;old_locus_tag=CCO35_13560 NZ_NPME01000003.1 Protein Homology CDS 557308 557814 . - 0 ID=cds-WP_000237776.1;Parent=gene-CCO35_RS13570;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=CCO35_RS13570;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 557940 558015 . + . ID=gene-CCO35_RS13575;Name=CCO35_RS13575;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS13575;old_locus_tag=CCO35_13565 NZ_NPME01000003.1 tRNAscan-SE tRNA 557940 558015 . + . ID=rna-CCO35_RS13575;Parent=gene-CCO35_RS13575;anticodon=(pos:557973..557975);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS13575;product=tRNA-Ile NZ_NPME01000003.1 tRNAscan-SE exon 557940 558015 . + . ID=exon-CCO35_RS13575-1;Parent=rna-CCO35_RS13575;anticodon=(pos:557973..557975);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS13575;product=tRNA-Ile NZ_NPME01000003.1 RefSeq gene 558094 558861 . - . ID=gene-CCO35_RS13580;Name=CCO35_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13580;old_locus_tag=CCO35_13570 NZ_NPME01000003.1 Protein Homology CDS 558094 558861 . - 0 ID=cds-WP_000213763.1;Parent=gene-CCO35_RS13580;Dbxref=GenBank:WP_000213763.1;Name=WP_000213763.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=CCO35_RS13580;product=siderophore-interacting protein;protein_id=WP_000213763.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 559093 559740 . + . ID=gene-CCO35_RS13585;Name=CCO35_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13585;old_locus_tag=CCO35_13575 NZ_NPME01000003.1 Protein Homology CDS 559093 559740 . + 0 ID=cds-WP_000983434.1;Parent=gene-CCO35_RS13585;Dbxref=GenBank:WP_000983434.1;Name=WP_000983434.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=CCO35_RS13585;product=PadR family transcriptional regulator;protein_id=WP_000983434.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 559737 561305 . - . ID=gene-CCO35_RS13590;Name=CCO35_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13590;old_locus_tag=CCO35_13580 NZ_NPME01000003.1 Protein Homology CDS 559737 561305 . - 0 ID=cds-WP_000478462.1;Parent=gene-CCO35_RS13590;Dbxref=GenBank:WP_000478462.1;Name=WP_000478462.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=CCO35_RS13590;product=methyl-accepting chemotaxis protein;protein_id=WP_000478462.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 561693 563213 . - . ID=gene-CCO35_RS13595;Name=CCO35_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13595;old_locus_tag=CCO35_13585 NZ_NPME01000003.1 Protein Homology CDS 561693 563213 . - 0 ID=cds-WP_000094645.1;Parent=gene-CCO35_RS13595;Dbxref=GenBank:WP_000094645.1;Name=WP_000094645.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=CCO35_RS13595;product=methyl-accepting chemotaxis protein;protein_id=WP_000094645.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 563643 565022 . + . ID=gene-CCO35_RS13605;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=CCO35_RS13605;old_locus_tag=CCO35_13595 NZ_NPME01000003.1 Protein Homology CDS 563643 565022 . + 0 ID=cds-WP_001520281.1;Parent=gene-CCO35_RS13605;Dbxref=GenBank:WP_001520281.1;Name=WP_001520281.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=CCO35_RS13605;product=putrescine aminotransferase;protein_id=WP_001520281.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 565193 567211 . + . ID=gene-CCO35_RS13610;Name=CCO35_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13610;old_locus_tag=CCO35_13600 NZ_NPME01000003.1 Protein Homology CDS 565193 567211 . + 0 ID=cds-WP_000121531.1;Parent=gene-CCO35_RS13610;Dbxref=GenBank:WP_000121531.1;Name=WP_000121531.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=CCO35_RS13610;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121531.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 567292 568428 . - . ID=gene-CCO35_RS13615;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=CCO35_RS13615;old_locus_tag=CCO35_13605 NZ_NPME01000003.1 Protein Homology CDS 567292 568428 . - 0 ID=cds-WP_000019989.1;Parent=gene-CCO35_RS13615;Dbxref=GenBank:WP_000019989.1;Name=WP_000019989.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=CCO35_RS13615;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019989.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 568514 569011 . + . ID=gene-CCO35_RS13620;Name=CCO35_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13620;old_locus_tag=CCO35_13610 NZ_NPME01000003.1 Protein Homology CDS 568514 569011 . + 0 ID=cds-WP_000202966.1;Parent=gene-CCO35_RS13620;Dbxref=GenBank:WP_000202966.1;Name=WP_000202966.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=CCO35_RS13620;product=M48 family metallopeptidase;protein_id=WP_000202966.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 569163 569855 . + . ID=gene-CCO35_RS13625;Name=CCO35_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13625;old_locus_tag=CCO35_13615 NZ_NPME01000003.1 Protein Homology CDS 569163 569855 . + 0 ID=cds-WP_000951045.1;Parent=gene-CCO35_RS13625;Dbxref=GenBank:WP_000951045.1;Name=WP_000951045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=CCO35_RS13625;product=SanA/YdcF family protein;protein_id=WP_000951045.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 569944 570942 . + . ID=gene-CCO35_RS13630;Name=CCO35_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13630;old_locus_tag=CCO35_13620 NZ_NPME01000003.1 Protein Homology CDS 569944 570942 . + 0 ID=cds-WP_000617682.1;Parent=gene-CCO35_RS13630;Dbxref=GenBank:WP_000617682.1;Name=WP_000617682.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=CCO35_RS13630;product=Gfo/Idh/MocA family protein;protein_id=WP_000617682.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 571212 572180 . + . ID=gene-CCO35_RS13635;Name=CCO35_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13635;old_locus_tag=CCO35_13625 NZ_NPME01000003.1 Protein Homology CDS 571212 572180 . + 0 ID=cds-WP_001098833.1;Parent=gene-CCO35_RS13635;Dbxref=GenBank:WP_001098833.1;Name=WP_001098833.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=CCO35_RS13635;product=TerC family protein;protein_id=WP_001098833.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 572435 573679 . + . ID=gene-CCO35_RS13640;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=CCO35_RS13640;old_locus_tag=CCO35_13630 NZ_NPME01000003.1 Protein Homology CDS 572435 573679 . + 0 ID=cds-WP_000235363.1;Parent=gene-CCO35_RS13640;Dbxref=GenBank:WP_000235363.1;Name=WP_000235363.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=CCO35_RS13640;product=serine/threonine transporter SstT;protein_id=WP_000235363.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 574129 574791 . + . ID=gene-CCO35_RS13650;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=CCO35_RS13650;old_locus_tag=CCO35_13640 NZ_NPME01000003.1 Protein Homology CDS 574129 574791 . + 0 ID=cds-WP_000422141.1;Parent=gene-CCO35_RS13650;Dbxref=GenBank:WP_000422141.1;Name=WP_000422141.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=CCO35_RS13650;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422141.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 574795 575178 . + . ID=gene-CCO35_RS13655;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=CCO35_RS13655;old_locus_tag=CCO35_13645 NZ_NPME01000003.1 Protein Homology CDS 574795 575178 . + 0 ID=cds-WP_000917516.1;Parent=gene-CCO35_RS13655;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=CCO35_RS13655;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 575323 575691 . + . ID=gene-CCO35_RS13660;Name=CCO35_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13660;old_locus_tag=CCO35_13650 NZ_NPME01000003.1 Protein Homology CDS 575323 575691 . + 0 ID=cds-WP_000877297.1;Parent=gene-CCO35_RS13660;Dbxref=GenBank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=CCO35_RS13660;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 575733 576038 . + . ID=gene-CCO35_RS13665;Name=CCO35_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13665;old_locus_tag=CCO35_13655 NZ_NPME01000003.1 Protein Homology CDS 575733 576038 . + 0 ID=cds-WP_000031219.1;Parent=gene-CCO35_RS13665;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=CCO35_RS13665;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 576041 576439 . + . ID=gene-CCO35_RS13670;Name=CCO35_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13670;old_locus_tag=CCO35_13660 NZ_NPME01000003.1 Protein Homology CDS 576041 576439 . + 0 ID=cds-WP_000785626.1;Parent=gene-CCO35_RS13670;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=CCO35_RS13670;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 576436 576735 . + . ID=gene-CCO35_RS13675;Name=CCO35_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13675;old_locus_tag=CCO35_13665 NZ_NPME01000003.1 Protein Homology CDS 576436 576735 . + 0 ID=cds-WP_000095496.1;Parent=gene-CCO35_RS13675;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=CCO35_RS13675;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 576983 577375 . + . ID=gene-CCO35_RS13680;Name=CCO35_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13680;old_locus_tag=CCO35_13670 NZ_NPME01000003.1 Protein Homology CDS 576983 577375 . + 0 ID=cds-WP_024133739.1;Parent=gene-CCO35_RS13680;Dbxref=GenBank:WP_024133739.1;Name=WP_024133739.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=CCO35_RS13680;product=DoxX family protein;protein_id=WP_024133739.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 577443 578429 . + . ID=gene-CCO35_RS13685;Name=CCO35_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13685;old_locus_tag=CCO35_13675 NZ_NPME01000003.1 Protein Homology CDS 577443 578429 . + 0 ID=cds-WP_000531158.1;Parent=gene-CCO35_RS13685;Dbxref=GenBank:WP_000531158.1;Name=WP_000531158.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=CCO35_RS13685;product=glutathione S-transferase family protein;protein_id=WP_000531158.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 578553 578918 . + . ID=gene-CCO35_RS13690;Name=CCO35_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13690;old_locus_tag=CCO35_13680 NZ_NPME01000003.1 Protein Homology CDS 578553 578918 . + 0 ID=cds-WP_000384139.1;Parent=gene-CCO35_RS13690;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=CCO35_RS13690;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 578957 579853 . - . ID=gene-CCO35_RS13695;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=CCO35_RS13695;old_locus_tag=CCO35_13685 NZ_NPME01000003.1 Protein Homology CDS 578957 579853 . - 0 ID=cds-WP_001041026.1;Parent=gene-CCO35_RS13695;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=CCO35_RS13695;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 579958 580659 . + . ID=gene-CCO35_RS13700;Name=CCO35_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13700;old_locus_tag=CCO35_13690 NZ_NPME01000003.1 Protein Homology CDS 579958 580659 . + 0 ID=cds-WP_000633548.1;Parent=gene-CCO35_RS13700;Dbxref=GenBank:WP_000633548.1;Name=WP_000633548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=CCO35_RS13700;product=pirin family protein;protein_id=WP_000633548.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 580683 580847 . + . ID=gene-CCO35_RS13705;Name=CCO35_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13705;old_locus_tag=CCO35_13695 NZ_NPME01000003.1 Protein Homology CDS 580683 580847 . + 0 ID=cds-WP_000039326.1;Parent=gene-CCO35_RS13705;Dbxref=GenBank:WP_000039326.1;Name=WP_000039326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=CCO35_RS13705;product=hypothetical protein;protein_id=WP_000039326.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 580960 582270 . - . ID=gene-CCO35_RS13710;Name=CCO35_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13710;old_locus_tag=CCO35_13700 NZ_NPME01000003.1 Protein Homology CDS 580960 582270 . - 0 ID=cds-WP_031566757.1;Parent=gene-CCO35_RS13710;Dbxref=GenBank:WP_031566757.1;Name=WP_031566757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=CCO35_RS13710;product=serine dehydratase subunit alpha family protein;protein_id=WP_031566757.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 582296 583627 . - . ID=gene-CCO35_RS13715;Name=CCO35_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13715;old_locus_tag=CCO35_13705 NZ_NPME01000003.1 Protein Homology CDS 582296 583627 . - 0 ID=cds-WP_000443189.1;Parent=gene-CCO35_RS13715;Dbxref=GenBank:WP_000443189.1;Name=WP_000443189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=CCO35_RS13715;product=amino acid permease;protein_id=WP_000443189.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 583943 585307 . - . ID=gene-CCO35_RS13720;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=CCO35_RS13720;old_locus_tag=CCO35_13710 NZ_NPME01000003.1 Protein Homology CDS 583943 585307 . - 0 ID=cds-WP_000622086.1;Parent=gene-CCO35_RS13720;Dbxref=GenBank:WP_000622086.1;Name=WP_000622086.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=CCO35_RS13720;product=L-serine ammonia-lyase;protein_id=WP_000622086.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 585377 587671 . - . ID=gene-CCO35_RS13725;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO35_RS13725;old_locus_tag=CCO35_13715 NZ_NPME01000003.1 Protein Homology CDS 585377 587671 . - 0 ID=cds-WP_000867316.1;Parent=gene-CCO35_RS13725;Dbxref=GenBank:WP_000867316.1;Name=WP_000867316.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=CCO35_RS13725;product=formate C-acetyltransferase;protein_id=WP_000867316.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 587705 588913 . - . ID=gene-CCO35_RS13730;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=CCO35_RS13730;old_locus_tag=CCO35_13720 NZ_NPME01000003.1 Protein Homology CDS 587705 588913 . - 0 ID=cds-WP_001001862.1;Parent=gene-CCO35_RS13730;Dbxref=GenBank:WP_001001862.1;Name=WP_001001862.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=CCO35_RS13730;product=propionate kinase;protein_id=WP_001001862.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 588980 590311 . - . ID=gene-CCO35_RS13735;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=CCO35_RS13735;old_locus_tag=CCO35_13725 NZ_NPME01000003.1 Protein Homology CDS 588980 590311 . - 0 ID=cds-WP_000108129.1;Parent=gene-CCO35_RS13735;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=CCO35_RS13735;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 590332 591321 . - . ID=gene-CCO35_RS13740;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CCO35_RS13740;old_locus_tag=CCO35_13730 NZ_NPME01000003.1 Protein Homology CDS 590332 591321 . - 0 ID=cds-WP_000548368.1;Parent=gene-CCO35_RS13740;Dbxref=GenBank:WP_000548368.1;Name=WP_000548368.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=CCO35_RS13740;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548368.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 591419 592357 . - . ID=gene-CCO35_RS13745;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=CCO35_RS13745;old_locus_tag=CCO35_13735 NZ_NPME01000003.1 Protein Homology CDS 591419 592357 . - 0 ID=cds-WP_001094907.1;Parent=gene-CCO35_RS13745;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=CCO35_RS13745;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 593531 593905 . - . ID=gene-CCO35_RS13765;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CCO35_RS13765;old_locus_tag=CCO35_13755 NZ_NPME01000003.1 cmsearch RNase_P_RNA 593531 593905 . - . ID=rna-CCO35_RS13765;Parent=gene-CCO35_RS13765;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS13765;product=RNase P RNA component class A NZ_NPME01000003.1 cmsearch exon 593531 593905 . - . ID=exon-CCO35_RS13765-1;Parent=rna-CCO35_RS13765;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS13765;product=RNase P RNA component class A NZ_NPME01000003.1 RefSeq gene 593938 595083 . - . ID=gene-CCO35_RS13770;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=CCO35_RS13770;old_locus_tag=CCO35_13760 NZ_NPME01000003.1 Protein Homology CDS 593938 595083 . - 0 ID=cds-WP_000706456.1;Parent=gene-CCO35_RS13770;Dbxref=GenBank:WP_000706456.1;Name=WP_000706456.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=CCO35_RS13770;product=glycerate 2-kinase;protein_id=WP_000706456.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 595181 596071 . - . ID=gene-CCO35_RS13775;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=CCO35_RS13775;old_locus_tag=CCO35_13765 NZ_NPME01000003.1 Protein Homology CDS 595181 596071 . - 0 ID=cds-WP_000178106.1;Parent=gene-CCO35_RS13775;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=CCO35_RS13775;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 596097 596867 . - . ID=gene-CCO35_RS13780;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=CCO35_RS13780;old_locus_tag=CCO35_13770 NZ_NPME01000003.1 Protein Homology CDS 596097 596867 . - 0 ID=cds-WP_001057715.1;Parent=gene-CCO35_RS13780;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=CCO35_RS13780;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 597397 598968 . + . ID=gene-CCO35_RS13785;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=CCO35_RS13785;old_locus_tag=CCO35_13775 NZ_NPME01000003.1 Protein Homology CDS 597397 598968 . + 0 ID=cds-WP_001273723.1;Parent=gene-CCO35_RS13785;Dbxref=GenBank:WP_001273723.1;Name=WP_001273723.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=CCO35_RS13785;product=galactarate dehydratase;protein_id=WP_001273723.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 599208 600155 . - . ID=gene-CCO35_RS13790;Name=CCO35_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13790;old_locus_tag=CCO35_13780 NZ_NPME01000003.1 Protein Homology CDS 599208 600155 . - 0 ID=cds-WP_001027806.1;Parent=gene-CCO35_RS13790;Dbxref=GenBank:WP_001027806.1;Name=WP_001027806.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462164.1;locus_tag=CCO35_RS13790;product=sugar kinase;protein_id=WP_001027806.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 600166 600999 . - . ID=gene-CCO35_RS13795;Name=CCO35_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13795;old_locus_tag=CCO35_13785 NZ_NPME01000003.1 Protein Homology CDS 600166 600999 . - 0 ID=cds-WP_001118368.1;Parent=gene-CCO35_RS13795;Dbxref=GenBank:WP_001118368.1;Name=WP_001118368.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462165.1;locus_tag=CCO35_RS13795;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001118368.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 601333 602187 . + . ID=gene-CCO35_RS13800;Name=CCO35_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13800;old_locus_tag=CCO35_13790 NZ_NPME01000003.1 Protein Homology CDS 601333 602187 . + 0 ID=cds-WP_000469985.1;Parent=gene-CCO35_RS13800;Dbxref=GenBank:WP_000469985.1;Name=WP_000469985.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=CCO35_RS13800;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469985.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 602198 603112 . + . ID=gene-CCO35_RS13805;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO35_RS13805;old_locus_tag=CCO35_13795 NZ_NPME01000003.1 Protein Homology CDS 602198 603112 . + 0 ID=cds-WP_094965356.1;Parent=gene-CCO35_RS13805;Dbxref=GenBank:WP_094965356.1;Name=WP_094965356.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462167.1;locus_tag=CCO35_RS13805;product=1-phosphofructokinase;protein_id=WP_094965356.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 603139 604566 . + . ID=gene-CCO35_RS13810;Name=CCO35_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13810;old_locus_tag=CCO35_13800 NZ_NPME01000003.1 Protein Homology CDS 603139 604566 . + 0 ID=cds-WP_000719914.1;Parent=gene-CCO35_RS13810;Dbxref=GenBank:WP_000719914.1;Name=WP_000719914.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462168.1;locus_tag=CCO35_RS13810;product=PTS fructose transporter subunit IIC;protein_id=WP_000719914.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 604553 605359 . + . ID=gene-CCO35_RS13815;Name=CCO35_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13815;old_locus_tag=CCO35_13805 NZ_NPME01000003.1 Protein Homology CDS 604553 605359 . + 0 ID=cds-WP_001175244.1;Parent=gene-CCO35_RS13815;Dbxref=GenBank:WP_001175244.1;Name=WP_001175244.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462169.1;locus_tag=CCO35_RS13815;product=HPr family phosphocarrier protein;protein_id=WP_001175244.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 605557 606828 . + . ID=gene-CCO35_RS13820;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=CCO35_RS13820;old_locus_tag=CCO35_13810 NZ_NPME01000003.1 Protein Homology CDS 605557 606828 . + 0 ID=cds-WP_000676006.1;Parent=gene-CCO35_RS13820;Dbxref=GenBank:WP_000676006.1;Name=WP_000676006.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=CCO35_RS13820;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000676006.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 606843 607307 . + . ID=gene-CCO35_RS13825;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CCO35_RS13825;old_locus_tag=CCO35_13815 NZ_NPME01000003.1 Protein Homology CDS 606843 607307 . + 0 ID=cds-WP_000080446.1;Parent=gene-CCO35_RS13825;Dbxref=GenBank:WP_000080446.1;Name=WP_000080446.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=CCO35_RS13825;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080446.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 607338 607622 . + . ID=gene-CCO35_RS13830;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CCO35_RS13830;old_locus_tag=CCO35_13820 NZ_NPME01000003.1 Protein Homology CDS 607338 607622 . + 0 ID=cds-WP_000824293.1;Parent=gene-CCO35_RS13830;Dbxref=GenBank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=CCO35_RS13830;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 607626 608999 . + . ID=gene-CCO35_RS13835;Name=CCO35_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13835;old_locus_tag=CCO35_13825 NZ_NPME01000003.1 Protein Homology CDS 607626 608999 . + 0 ID=cds-WP_000490600.1;Parent=gene-CCO35_RS13835;Dbxref=GenBank:WP_000490600.1;Name=WP_000490600.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=CCO35_RS13835;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490600.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 609043 610086 . + . ID=gene-CCO35_RS13840;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CCO35_RS13840;old_locus_tag=CCO35_13830 NZ_NPME01000003.1 Protein Homology CDS 609043 610086 . + 0 ID=cds-WP_000844174.1;Parent=gene-CCO35_RS13840;Dbxref=GenBank:WP_000844174.1;Name=WP_000844174.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=CCO35_RS13840;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844174.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 610197 610970 . + . ID=gene-CCO35_RS13845;Name=CCO35_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13845;old_locus_tag=CCO35_13835 NZ_NPME01000003.1 Protein Homology CDS 610197 610970 . + 0 ID=cds-WP_001083899.1;Parent=gene-CCO35_RS13845;Dbxref=GenBank:WP_001083899.1;Name=WP_001083899.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=CCO35_RS13845;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083899.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 611128 611991 . - . ID=gene-CCO35_RS13850;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CCO35_RS13850;old_locus_tag=CCO35_13840 NZ_NPME01000003.1 Protein Homology CDS 611128 611991 . - 0 ID=cds-WP_000812285.1;Parent=gene-CCO35_RS13850;Dbxref=GenBank:WP_000812285.1;Name=WP_000812285.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=CCO35_RS13850;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812285.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 612055 614097 . + . ID=gene-CCO35_RS13855;Name=CCO35_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13855;old_locus_tag=CCO35_13845 NZ_NPME01000003.1 Protein Homology CDS 612055 614097 . + 0 ID=cds-WP_031566790.1;Parent=gene-CCO35_RS13855;Dbxref=GenBank:WP_031566790.1;Name=WP_031566790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=CCO35_RS13855;product=penicillin-binding protein activator;protein_id=WP_031566790.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 614055 614450 . + . ID=gene-CCO35_RS13860;Name=CCO35_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13860;old_locus_tag=CCO35_13850 NZ_NPME01000003.1 Protein Homology CDS 614055 614450 . + 0 ID=cds-WP_000057285.1;Parent=gene-CCO35_RS13860;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=CCO35_RS13860;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 614472 615062 . + . ID=gene-CCO35_RS13865;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=CCO35_RS13865;old_locus_tag=CCO35_13855 NZ_NPME01000003.1 Protein Homology CDS 614472 615062 . + 0 ID=cds-WP_000893481.1;Parent=gene-CCO35_RS13865;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=CCO35_RS13865;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 615072 615647 . + . ID=gene-CCO35_RS13870;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=CCO35_RS13870;old_locus_tag=CCO35_13860 NZ_NPME01000003.1 Protein Homology CDS 615072 615647 . + 0 ID=cds-WP_000643280.1;Parent=gene-CCO35_RS13870;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=CCO35_RS13870;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 615714 616349 . - . ID=gene-CCO35_RS13875;Name=CCO35_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13875;old_locus_tag=CCO35_13865 NZ_NPME01000003.1 Protein Homology CDS 615714 616349 . - 0 ID=cds-WP_001552025.1;Parent=gene-CCO35_RS13875;Dbxref=GenBank:WP_001552025.1;Name=WP_001552025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=CCO35_RS13875;product=NAD(P)H-binding protein;protein_id=WP_001552025.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 616480 616998 . + . ID=gene-CCO35_RS13880;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=CCO35_RS13880;old_locus_tag=CCO35_13870 NZ_NPME01000003.1 Protein Homology CDS 616480 616998 . + 0 ID=cds-WP_000037599.1;Parent=gene-CCO35_RS13880;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=CCO35_RS13880;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 616978 617421 . - . ID=gene-CCO35_RS13885;Name=CCO35_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13885;old_locus_tag=CCO35_13875 NZ_NPME01000003.1 Protein Homology CDS 616978 617421 . - 0 ID=cds-WP_000380406.1;Parent=gene-CCO35_RS13885;Dbxref=GenBank:WP_000380406.1;Name=WP_000380406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=CCO35_RS13885;product=YhbP family protein;protein_id=WP_000380406.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 617459 617776 . + . ID=gene-CCO35_RS13890;Name=CCO35_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13890;old_locus_tag=CCO35_13880 NZ_NPME01000003.1 Protein Homology CDS 617459 617776 . + 0 ID=cds-WP_000928379.1;Parent=gene-CCO35_RS13890;Dbxref=GenBank:WP_000928379.1;Name=WP_000928379.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=CCO35_RS13890;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 617763 618266 . - . ID=gene-CCO35_RS13895;Name=CCO35_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13895;old_locus_tag=CCO35_13885 NZ_NPME01000003.1 Protein Homology CDS 617763 618266 . - 0 ID=cds-WP_000908562.1;Parent=gene-CCO35_RS13895;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=CCO35_RS13895;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 618260 618784 . - . ID=gene-CCO35_RS13900;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=CCO35_RS13900;old_locus_tag=CCO35_13890 NZ_NPME01000003.1 Protein Homology CDS 618260 618784 . - 0 ID=cds-WP_000884721.1;Parent=gene-CCO35_RS13900;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=CCO35_RS13900;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 619001 619996 . + . ID=gene-CCO35_RS13905;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=CCO35_RS13905;old_locus_tag=CCO35_13895 NZ_NPME01000003.1 Protein Homology CDS 619001 619996 . + 0 ID=cds-WP_000421310.1;Parent=gene-CCO35_RS13905;Dbxref=GenBank:WP_000421310.1;Name=WP_000421310.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=CCO35_RS13905;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421310.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 620005 620883 . + . ID=gene-CCO35_RS13910;Name=CCO35_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13910;old_locus_tag=CCO35_13900 NZ_NPME01000003.1 Protein Homology CDS 620005 620883 . + 0 ID=cds-WP_000877715.1;Parent=gene-CCO35_RS13910;Dbxref=GenBank:WP_000877715.1;Name=WP_000877715.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=CCO35_RS13910;product=U32 family peptidase;protein_id=WP_000877715.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 621060 622067 . + . ID=gene-CCO35_RS13915;Name=CCO35_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13915;old_locus_tag=CCO35_13905 NZ_NPME01000003.1 Protein Homology CDS 621060 622067 . + 0 ID=cds-WP_000130432.1;Parent=gene-CCO35_RS13915;Dbxref=GenBank:WP_000130432.1;Name=WP_000130432.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=CCO35_RS13915;product=luciferase-like monooxygenase;protein_id=WP_000130432.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 622158 623402 . - . ID=gene-CCO35_RS13920;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=CCO35_RS13920;old_locus_tag=CCO35_13910 NZ_NPME01000003.1 Protein Homology CDS 622158 623402 . - 0 ID=cds-WP_000224374.1;Parent=gene-CCO35_RS13920;Dbxref=GenBank:WP_000224374.1;Name=WP_000224374.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=CCO35_RS13920;product=tryptophan permease;protein_id=WP_000224374.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 623556 625445 . - . ID=gene-CCO35_RS13925;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=CCO35_RS13925;old_locus_tag=CCO35_13915 NZ_NPME01000003.1 Protein Homology CDS 623556 625445 . - 0 ID=cds-WP_000807248.1;Parent=gene-CCO35_RS13925;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=CCO35_RS13925;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 625438 625518 . - . ID=gene-CCO35_RS23670;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=CCO35_RS23670 NZ_NPME01000003.1 Protein Homology CDS 625438 625518 . - 0 ID=cds-WP_010723222.1;Parent=gene-CCO35_RS23670;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=CCO35_RS23670;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 625624 626508 . - . ID=gene-CCO35_RS13930;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=CCO35_RS13930;old_locus_tag=CCO35_13920 NZ_NPME01000003.1 Protein Homology CDS 625624 626508 . - 0 ID=cds-WP_000802069.1;Parent=gene-CCO35_RS13930;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=CCO35_RS13930;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 626618 628753 . - . ID=gene-CCO35_RS13935;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CCO35_RS13935;old_locus_tag=CCO35_13925 NZ_NPME01000003.1 Protein Homology CDS 626618 628753 . - 0 ID=cds-WP_001670767.1;Parent=gene-CCO35_RS13935;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=CCO35_RS13935;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 628995 629264 . - . ID=gene-CCO35_RS13940;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CCO35_RS13940;old_locus_tag=CCO35_13930 NZ_NPME01000003.1 Protein Homology CDS 628995 629264 . - 0 ID=cds-WP_000059465.1;Parent=gene-CCO35_RS13940;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=CCO35_RS13940;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 629415 630359 . - . ID=gene-CCO35_RS13945;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CCO35_RS13945;old_locus_tag=CCO35_13935 NZ_NPME01000003.1 Protein Homology CDS 629415 630359 . - 0 ID=cds-WP_023212280.1;Parent=gene-CCO35_RS13945;Dbxref=GenBank:WP_023212280.1;Name=WP_023212280.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=CCO35_RS13945;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_023212280.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 630359 630760 . - . ID=gene-CCO35_RS13950;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CCO35_RS13950;old_locus_tag=CCO35_13940 NZ_NPME01000003.1 Protein Homology CDS 630359 630760 . - 0 ID=cds-WP_001040208.1;Parent=gene-CCO35_RS13950;Dbxref=GenBank:WP_001040208.1;Name=WP_001040208.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=CCO35_RS13950;product=30S ribosome-binding factor RbfA;protein_id=WP_001040208.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 630981 633659 . - . ID=gene-CCO35_RS13955;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CCO35_RS13955;old_locus_tag=CCO35_13945 NZ_NPME01000003.1 Protein Homology CDS 630981 633659 . - 0 ID=cds-WP_000133064.1;Parent=gene-CCO35_RS13955;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=CCO35_RS13955;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 633684 635186 . - . ID=gene-CCO35_RS13960;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CCO35_RS13960;old_locus_tag=CCO35_13950 NZ_NPME01000003.1 Protein Homology CDS 633684 635186 . - 0 ID=cds-WP_001031039.1;Parent=gene-CCO35_RS13960;Dbxref=GenBank:WP_001031039.1;Name=WP_001031039.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=CCO35_RS13960;product=transcription termination factor NusA;protein_id=WP_001031039.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 635214 635666 . - . ID=gene-CCO35_RS13965;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CCO35_RS13965;old_locus_tag=CCO35_13955 NZ_NPME01000003.1 Protein Homology CDS 635214 635666 . - 0 ID=cds-WP_000105461.1;Parent=gene-CCO35_RS13965;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=CCO35_RS13965;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11 NZ_NPME01000003.1 RefSeq gene 635874 635950 . - . ID=gene-CCO35_RS13970;Name=CCO35_RS13970;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS13970;old_locus_tag=CCO35_13960 NZ_NPME01000003.1 tRNAscan-SE tRNA 635874 635950 . - . ID=rna-CCO35_RS13970;Parent=gene-CCO35_RS13970;anticodon=(pos:complement(635914..635916));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS13970;product=tRNA-Met NZ_NPME01000003.1 tRNAscan-SE exon 635874 635950 . - . ID=exon-CCO35_RS13970-1;Parent=rna-CCO35_RS13970;anticodon=(pos:complement(635914..635916));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS13970;product=tRNA-Met NZ_NPME01000003.1 RefSeq gene 636294 637637 . + . ID=gene-CCO35_RS13975;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=CCO35_RS13975;old_locus_tag=CCO35_13965 NZ_NPME01000003.1 Protein Homology CDS 636294 637637 . + 0 ID=cds-WP_000207653.1;Parent=gene-CCO35_RS13975;Dbxref=GenBank:WP_000207653.1;Name=WP_000207653.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=CCO35_RS13975;product=argininosuccinate synthase;protein_id=WP_000207653.1;transl_table=11 ##sequence-region NZ_NPME01000004.1 1 582215 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000004.1 RefSeq region 1 582215 . + . ID=NZ_NPME01000004.1:1..582215;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000004.1 RefSeq gene 1 196 . + . ID=gene-CCO35_RS13980;Name=CCO35_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS13980;old_locus_tag=CCO35_13970;partial=true;start_range=.,1 NZ_NPME01000004.1 Protein Homology CDS 1 196 . + 1 ID=cds-WP_367301562.1;Parent=gene-CCO35_RS13980;Dbxref=GenBank:WP_367301562.1;Name=WP_367301562.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=CCO35_RS13980;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_367301562.1;start_range=.,1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 240 887 . - . ID=gene-CCO35_RS13985;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=CCO35_RS13985;old_locus_tag=CCO35_13975 NZ_NPME01000004.1 Protein Homology CDS 240 887 . - 0 ID=cds-WP_001115500.1;Parent=gene-CCO35_RS13985;Dbxref=GenBank:WP_001115500.1;Name=WP_001115500.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=CCO35_RS13985;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115500.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 1706 2269 . + . ID=gene-CCO35_RS14000;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=CCO35_RS14000;old_locus_tag=CCO35_13990 NZ_NPME01000004.1 Protein Homology CDS 1706 2269 . + 0 ID=cds-WP_000281871.1;Parent=gene-CCO35_RS14000;Dbxref=GenBank:WP_000281871.1;Name=WP_000281871.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=CCO35_RS14000;product=lipid A 3-O-deacylase PagL;protein_id=WP_000281871.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 2462 2665 . - . ID=gene-CCO35_RS14005;Name=CCO35_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14005;old_locus_tag=CCO35_13995 NZ_NPME01000004.1 Protein Homology CDS 2462 2665 . - 0 ID=cds-WP_001110923.1;Parent=gene-CCO35_RS14005;Dbxref=GenBank:WP_001110923.1;Name=WP_001110923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=CCO35_RS14005;product=DinI-like family protein;protein_id=WP_001110923.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 2659 2751 . - . ID=gene-CCO35_RS24080;Name=CCO35_RS24080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24080;old_locus_tag=CCO35_14000;partial=true;pseudo=true;start_range=.,2659 NZ_NPME01000004.1 Protein Homology CDS 2659 2751 . - 0 ID=cds-CCO35_RS24080;Parent=gene-CCO35_RS24080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=CCO35_RS24080;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2659;transl_table=11 NZ_NPME01000004.1 RefSeq gene 2707 2783 . - . ID=gene-CCO35_RS14015;Name=CCO35_RS14015;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS14015;old_locus_tag=CCO35_14005 NZ_NPME01000004.1 tRNAscan-SE tRNA 2707 2783 . - . ID=rna-CCO35_RS14015;Parent=gene-CCO35_RS14015;anticodon=(pos:complement(2747..2749));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS14015;product=tRNA-Pro NZ_NPME01000004.1 tRNAscan-SE exon 2707 2783 . - . ID=exon-CCO35_RS14015-1;Parent=rna-CCO35_RS14015;anticodon=(pos:complement(2747..2749));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS14015;product=tRNA-Pro NZ_NPME01000004.1 RefSeq gene 2857 4617 . - . ID=gene-CCO35_RS14020;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=CCO35_RS14020;old_locus_tag=CCO35_14010 NZ_NPME01000004.1 Protein Homology CDS 2857 4617 . - 0 ID=cds-WP_001629999.1;Parent=gene-CCO35_RS14020;Dbxref=GenBank:WP_001629999.1;Name=WP_001629999.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=CCO35_RS14020;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_001629999.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 4649 4876 . - . ID=gene-CCO35_RS14025;Name=CCO35_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14025;old_locus_tag=CCO35_14015 NZ_NPME01000004.1 Protein Homology CDS 4649 4876 . - 0 ID=cds-WP_001135904.1;Parent=gene-CCO35_RS14025;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=CCO35_RS14025;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 5056 6063 . + . ID=gene-CCO35_RS14030;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=CCO35_RS14030;old_locus_tag=CCO35_14020 NZ_NPME01000004.1 Protein Homology CDS 5056 6063 . + 0 ID=cds-WP_000050806.1;Parent=gene-CCO35_RS14030;Dbxref=GenBank:WP_000050806.1;Name=WP_000050806.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=CCO35_RS14030;product=nucleoid-associated protein YejK;protein_id=WP_000050806.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 6184 6468 . - . ID=gene-CCO35_RS14035;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=CCO35_RS14035;old_locus_tag=CCO35_14025 NZ_NPME01000004.1 Protein Homology CDS 6184 6468 . - 0 ID=cds-WP_000494192.1;Parent=gene-CCO35_RS14035;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=CCO35_RS14035;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 6593 8353 . - . ID=gene-CCO35_RS14040;Name=CCO35_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14040;old_locus_tag=CCO35_14030 NZ_NPME01000004.1 Protein Homology CDS 6593 8353 . - 0 ID=cds-WP_000578115.1;Parent=gene-CCO35_RS14040;Dbxref=GenBank:WP_000578115.1;Name=WP_000578115.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=CCO35_RS14040;product=DEAD/DEAH box helicase;protein_id=WP_000578115.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 8505 9200 . + . ID=gene-CCO35_RS14045;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=CCO35_RS14045;old_locus_tag=CCO35_14035 NZ_NPME01000004.1 Protein Homology CDS 8505 9200 . + 0 ID=cds-WP_001234836.1;Parent=gene-CCO35_RS14045;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=CCO35_RS14045;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 9228 10418 . + . ID=gene-CCO35_RS14050;Name=CCO35_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14050;old_locus_tag=CCO35_14040 NZ_NPME01000004.1 Protein Homology CDS 9228 10418 . + 0 ID=cds-WP_000213349.1;Parent=gene-CCO35_RS14050;Dbxref=GenBank:WP_000213349.1;Name=WP_000213349.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=CCO35_RS14050;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213349.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 10809 11153 . + . ID=gene-CCO35_RS14060;Name=CCO35_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14060;old_locus_tag=CCO35_14050 NZ_NPME01000004.1 Protein Homology CDS 10809 11153 . + 0 ID=cds-WP_001094639.1;Parent=gene-CCO35_RS14060;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=CCO35_RS14060;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 11157 12746 . - . ID=gene-CCO35_RS14065;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=CCO35_RS14065;old_locus_tag=CCO35_14055 NZ_NPME01000004.1 Protein Homology CDS 11157 12746 . - 0 ID=cds-WP_031567690.1;Parent=gene-CCO35_RS14065;Dbxref=GenBank:WP_031567690.1;Name=WP_031567690.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=CCO35_RS14065;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_031567690.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 12748 13773 . - . ID=gene-CCO35_RS14070;Name=CCO35_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14070;old_locus_tag=CCO35_14060 NZ_NPME01000004.1 Protein Homology CDS 12748 13773 . - 0 ID=cds-WP_031567693.1;Parent=gene-CCO35_RS14070;Dbxref=GenBank:WP_031567693.1;Name=WP_031567693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=CCO35_RS14070;product=ABC transporter permease;protein_id=WP_031567693.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 13773 14867 . - . ID=gene-CCO35_RS14075;Name=CCO35_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14075;old_locus_tag=CCO35_14065 NZ_NPME01000004.1 Protein Homology CDS 13773 14867 . - 0 ID=cds-WP_000501623.1;Parent=gene-CCO35_RS14075;Dbxref=GenBank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=CCO35_RS14075;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 14877 16682 . - . ID=gene-CCO35_RS14080;Name=CCO35_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14080;old_locus_tag=CCO35_14070 NZ_NPME01000004.1 Protein Homology CDS 14877 16682 . - 0 ID=cds-WP_000561742.1;Parent=gene-CCO35_RS14080;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=CCO35_RS14080;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 16789 18345 . - . ID=gene-CCO35_RS14085;Name=CCO35_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14085;old_locus_tag=CCO35_14075 NZ_NPME01000004.1 Protein Homology CDS 16789 18345 . - 0 ID=cds-WP_000957765.1;Parent=gene-CCO35_RS14085;Dbxref=GenBank:WP_000957765.1;Name=WP_000957765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=CCO35_RS14085;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000957765.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 18671 19243 . - . ID=gene-CCO35_RS14090;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=CCO35_RS14090;old_locus_tag=CCO35_14080 NZ_NPME01000004.1 Protein Homology CDS 18671 19243 . - 0 ID=cds-WP_000241015.1;Parent=gene-CCO35_RS14090;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=CCO35_RS14090;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 19657 20376 . - . ID=gene-CCO35_RS14100;Name=CCO35_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14100;old_locus_tag=CCO35_14090 NZ_NPME01000004.1 Protein Homology CDS 19657 20376 . - 0 ID=cds-WP_000178091.1;Parent=gene-CCO35_RS14100;Dbxref=GenBank:WP_000178091.1;Name=WP_000178091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=CCO35_RS14100;product=phosphatase PAP2 family protein;protein_id=WP_000178091.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 20406 21392 . - . ID=gene-CCO35_RS14105;Name=CCO35_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14105;old_locus_tag=CCO35_14095 NZ_NPME01000004.1 Protein Homology CDS 20406 21392 . - 0 ID=cds-WP_000169351.1;Parent=gene-CCO35_RS14105;Dbxref=GenBank:WP_000169351.1;Name=WP_000169351.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=CCO35_RS14105;product=CobW family GTP-binding protein;protein_id=WP_000169351.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 21604 22176 . - . ID=gene-CCO35_RS14110;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=CCO35_RS14110;old_locus_tag=CCO35_14100 NZ_NPME01000004.1 Protein Homology CDS 21604 22176 . - 0 ID=cds-WP_001136822.1;Parent=gene-CCO35_RS14110;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=CCO35_RS14110;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 22500 22754 . + . ID=gene-CCO35_RS14115;Name=CCO35_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14115;old_locus_tag=CCO35_14105 NZ_NPME01000004.1 Protein Homology CDS 22500 22754 . + 0 ID=cds-WP_001528509.1;Parent=gene-CCO35_RS14115;Dbxref=GenBank:WP_001528509.1;Name=WP_001528509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=CCO35_RS14115;product=YkgJ family cysteine cluster protein;protein_id=WP_001528509.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 23142 23264 . + . ID=gene-CCO35_RS14120;Name=CCO35_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14120;old_locus_tag=CCO35_14110 NZ_NPME01000004.1 Protein Homology CDS 23142 23264 . + 0 ID=cds-WP_001519564.1;Parent=gene-CCO35_RS14120;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=CCO35_RS14120;product=membrane protein;protein_id=WP_001519564.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 23266 23931 . + . ID=gene-CCO35_RS14125;Name=CCO35_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14125;old_locus_tag=CCO35_14115 NZ_NPME01000004.1 Protein Homology CDS 23266 23931 . + 0 ID=cds-WP_001213881.1;Parent=gene-CCO35_RS14125;Dbxref=GenBank:WP_001213881.1;Name=WP_001213881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=CCO35_RS14125;product=GNVR domain-containing protein;protein_id=WP_001213881.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 23996 25177 . - . ID=gene-CCO35_RS14130;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=CCO35_RS14130;old_locus_tag=CCO35_14120 NZ_NPME01000004.1 Protein Homology CDS 23996 25177 . - 0 ID=cds-WP_000551942.1;Parent=gene-CCO35_RS14130;Dbxref=GenBank:WP_000551942.1;Name=WP_000551942.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=CCO35_RS14130;product=sugar efflux transporter SetB;protein_id=WP_000551942.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 25547 26677 . + . ID=gene-CCO35_RS14140;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=CCO35_RS14140;old_locus_tag=CCO35_14130 NZ_NPME01000004.1 Protein Homology CDS 25547 26677 . + 0 ID=cds-WP_000487287.1;Parent=gene-CCO35_RS14140;Dbxref=GenBank:WP_000487287.1;Name=WP_000487287.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=CCO35_RS14140;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487287.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 26677 27615 . + . ID=gene-CCO35_RS14145;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=CCO35_RS14145;old_locus_tag=CCO35_14135 NZ_NPME01000004.1 Protein Homology CDS 26677 27615 . + 0 ID=cds-WP_000091249.1;Parent=gene-CCO35_RS14145;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=CCO35_RS14145;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 27632 29320 . + . ID=gene-CCO35_RS14150;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=CCO35_RS14150;old_locus_tag=CCO35_14140 NZ_NPME01000004.1 Protein Homology CDS 27632 29320 . + 0 ID=cds-WP_000854488.1;Parent=gene-CCO35_RS14150;Dbxref=GenBank:WP_000854488.1;Name=WP_000854488.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=CCO35_RS14150;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854488.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 29385 30242 . - . ID=gene-CCO35_RS14155;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=CCO35_RS14155;old_locus_tag=CCO35_14145 NZ_NPME01000004.1 Protein Homology CDS 29385 30242 . - 0 ID=cds-WP_000873912.1;Parent=gene-CCO35_RS14155;Dbxref=GenBank:WP_000873912.1;Name=WP_000873912.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=CCO35_RS14155;product=deoxyribonuclease IV;protein_id=WP_000873912.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 30321 31370 . - . ID=gene-CCO35_RS14160;Name=CCO35_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14160;old_locus_tag=CCO35_14150 NZ_NPME01000004.1 Protein Homology CDS 30321 31370 . - 0 ID=cds-WP_000137967.1;Parent=gene-CCO35_RS14160;Dbxref=GenBank:WP_000137967.1;Name=WP_000137967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=CCO35_RS14160;product=YeiH family protein;protein_id=WP_000137967.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 31491 32354 . + . ID=gene-CCO35_RS14165;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=CCO35_RS14165;old_locus_tag=CCO35_14155 NZ_NPME01000004.1 Protein Homology CDS 31491 32354 . + 0 ID=cds-WP_000548316.1;Parent=gene-CCO35_RS14165;Dbxref=GenBank:WP_000548316.1;Name=WP_000548316.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=CCO35_RS14165;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548316.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 32544 34013 . + . ID=gene-CCO35_RS14170;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=CCO35_RS14170;old_locus_tag=CCO35_14160 NZ_NPME01000004.1 Protein Homology CDS 32544 34013 . + 0 ID=cds-WP_000534999.1;Parent=gene-CCO35_RS14170;Dbxref=GenBank:WP_000534999.1;Name=WP_000534999.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=CCO35_RS14170;product=lysine-specific permease;protein_id=WP_000534999.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 34358 36349 . + . ID=gene-CCO35_RS14180;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=CCO35_RS14180;old_locus_tag=CCO35_14170 NZ_NPME01000004.1 Protein Homology CDS 34358 36349 . + 0 ID=cds-WP_053258946.1;Parent=gene-CCO35_RS14180;Dbxref=GenBank:WP_053258946.1;Name=WP_053258946.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=CCO35_RS14180;product=catecholate siderophore receptor CirA;protein_id=WP_053258946.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 36393 37715 . - . ID=gene-CCO35_RS14185;Name=CCO35_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14185;old_locus_tag=CCO35_14175 NZ_NPME01000004.1 Protein Homology CDS 36393 37715 . - 0 ID=cds-WP_000023812.1;Parent=gene-CCO35_RS14185;Dbxref=GenBank:WP_000023812.1;Name=WP_000023812.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=CCO35_RS14185;product=MFS transporter;protein_id=WP_000023812.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 37748 38635 . - . ID=gene-CCO35_RS14190;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO35_RS14190;old_locus_tag=CCO35_14180 NZ_NPME01000004.1 Protein Homology CDS 37748 38635 . - 0 ID=cds-WP_000022917.1;Parent=gene-CCO35_RS14190;Dbxref=GenBank:WP_000022917.1;Name=WP_000022917.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=CCO35_RS14190;product=phosphoserine phosphatase SerB;protein_id=WP_000022917.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 38852 40219 . + . ID=gene-CCO35_RS14195;Name=CCO35_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14195;old_locus_tag=CCO35_14185 NZ_NPME01000004.1 Protein Homology CDS 38852 40219 . + 0 ID=cds-WP_000443207.1;Parent=gene-CCO35_RS14195;Dbxref=GenBank:WP_000443207.1;Name=WP_000443207.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=CCO35_RS14195;product=L-serine ammonia-lyase;protein_id=WP_000443207.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 40224 40613 . + . ID=gene-CCO35_RS14200;Name=CCO35_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14200;old_locus_tag=CCO35_14190 NZ_NPME01000004.1 Protein Homology CDS 40224 40613 . + 0 ID=cds-WP_000876817.1;Parent=gene-CCO35_RS14200;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=CCO35_RS14200;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 40602 41459 . - . ID=gene-CCO35_RS14205;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=CCO35_RS14205;old_locus_tag=CCO35_14195 NZ_NPME01000004.1 Protein Homology CDS 40602 41459 . - 0 ID=cds-WP_023231107.1;Parent=gene-CCO35_RS14205;Dbxref=GenBank:WP_023231107.1;Name=WP_023231107.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425500.1;locus_tag=CCO35_RS14205;product=S-formylglutathione hydrolase;protein_id=WP_023231107.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 41789 42457 . + . ID=gene-CCO35_RS14215;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=CCO35_RS14215;old_locus_tag=CCO35_14205 NZ_NPME01000004.1 Protein Homology CDS 41789 42457 . + 0 ID=cds-WP_001139611.1;Parent=gene-CCO35_RS14215;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=CCO35_RS14215;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 42472 43614 . + . ID=gene-CCO35_RS14220;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=CCO35_RS14220;old_locus_tag=CCO35_14210 NZ_NPME01000004.1 Protein Homology CDS 42472 43614 . + 0 ID=cds-WP_053258953.1;Parent=gene-CCO35_RS14220;Dbxref=GenBank:WP_053258953.1;Name=WP_053258953.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=CCO35_RS14220;product=DUF418 domain-containing protein YeiB;protein_id=WP_053258953.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 43764 44786 . + . ID=gene-CCO35_RS14225;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=CCO35_RS14225;old_locus_tag=CCO35_14215 NZ_NPME01000004.1 Protein Homology CDS 43764 44786 . + 0 ID=cds-WP_000628634.1;Parent=gene-CCO35_RS14225;Dbxref=GenBank:WP_000628634.1;Name=WP_000628634.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=CCO35_RS14225;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628634.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 45285 46283 . + . ID=gene-CCO35_RS14230;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=CCO35_RS14230;old_locus_tag=CCO35_14220 NZ_NPME01000004.1 Protein Homology CDS 45285 46283 . + 0 ID=cds-WP_001036938.1;Parent=gene-CCO35_RS14230;Dbxref=GenBank:WP_001036938.1;Name=WP_001036938.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=CCO35_RS14230;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036938.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 46417 47937 . + . ID=gene-CCO35_RS14235;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=CCO35_RS14235;old_locus_tag=CCO35_14225 NZ_NPME01000004.1 Protein Homology CDS 46417 47937 . + 0 ID=cds-WP_023215249.1;Parent=gene-CCO35_RS14235;Dbxref=GenBank:WP_023215249.1;Name=WP_023215249.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=CCO35_RS14235;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_023215249.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 47953 48963 . + . ID=gene-CCO35_RS14240;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=CCO35_RS14240;old_locus_tag=CCO35_14230 NZ_NPME01000004.1 Protein Homology CDS 47953 48963 . + 0 ID=cds-WP_001275101.1;Parent=gene-CCO35_RS14240;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=CCO35_RS14240;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 49038 50273 . - . ID=gene-CCO35_RS14245;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=CCO35_RS14245;old_locus_tag=CCO35_14235 NZ_NPME01000004.1 Protein Homology CDS 49038 50273 . - 0 ID=cds-WP_094965357.1;Parent=gene-CCO35_RS14245;Dbxref=GenBank:WP_094965357.1;Name=WP_094965357.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=CCO35_RS14245;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_094965357.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 50267 51508 . - . ID=gene-CCO35_RS14250;Name=CCO35_RS14250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS14250;old_locus_tag=CCO35_14240;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 50267 51508 . - 0 ID=cds-CCO35_RS14250;Parent=gene-CCO35_RS14250;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=CCO35_RS14250;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq gene 51713 51958 . - . ID=gene-CCO35_RS14255;Name=CCO35_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14255;old_locus_tag=CCO35_14245 NZ_NPME01000004.1 Protein Homology CDS 51713 51958 . - 0 ID=cds-WP_077916011.1;Parent=gene-CCO35_RS14255;Dbxref=GenBank:WP_077916011.1;Name=WP_077916011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=CCO35_RS14255;product=DUF2542 family protein;protein_id=WP_077916011.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 51955 52674 . - . ID=gene-CCO35_RS14260;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=CCO35_RS14260;old_locus_tag=CCO35_14250 NZ_NPME01000004.1 Protein Homology CDS 51955 52674 . - 0 ID=cds-WP_000920081.1;Parent=gene-CCO35_RS14260;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=CCO35_RS14260;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 52851 53735 . - . ID=gene-CCO35_RS14265;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CCO35_RS14265;old_locus_tag=CCO35_14255 NZ_NPME01000004.1 Protein Homology CDS 52851 53735 . - 0 ID=cds-WP_000553526.1;Parent=gene-CCO35_RS14265;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=CCO35_RS14265;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 53889 54584 . - . ID=gene-CCO35_RS14270;Name=CCO35_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14270;old_locus_tag=CCO35_14260 NZ_NPME01000004.1 Protein Homology CDS 53889 54584 . - 0 ID=cds-WP_000989296.1;Parent=gene-CCO35_RS14270;Dbxref=GenBank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=CCO35_RS14270;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 54581 54979 . - . ID=gene-CCO35_RS14275;Name=CCO35_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14275;old_locus_tag=CCO35_14265 NZ_NPME01000004.1 Protein Homology CDS 54581 54979 . - 0 ID=cds-WP_000045719.1;Parent=gene-CCO35_RS14275;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=CCO35_RS14275;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 55111 56019 . - . ID=gene-CCO35_RS14280;Name=CCO35_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14280;old_locus_tag=CCO35_14270 NZ_NPME01000004.1 Protein Homology CDS 55111 56019 . - 0 ID=cds-WP_000024662.1;Parent=gene-CCO35_RS14280;Dbxref=GenBank:WP_000024662.1;Name=WP_000024662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=CCO35_RS14280;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024662.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 56145 57503 . + . ID=gene-CCO35_RS14285;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=CCO35_RS14285;old_locus_tag=CCO35_14275 NZ_NPME01000004.1 Protein Homology CDS 56145 57503 . + 0 ID=cds-WP_000194217.1;Parent=gene-CCO35_RS14285;Dbxref=GenBank:WP_000194217.1;Name=WP_000194217.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=CCO35_RS14285;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_000194217.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 57515 58552 . + . ID=gene-CCO35_RS14290;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=CCO35_RS14290;old_locus_tag=CCO35_14280 NZ_NPME01000004.1 Protein Homology CDS 57515 58552 . + 0 ID=cds-WP_001289857.1;Parent=gene-CCO35_RS14290;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=CCO35_RS14290;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 58568 59269 . + . ID=gene-CCO35_RS14295;Name=CCO35_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14295;old_locus_tag=CCO35_14285 NZ_NPME01000004.1 Protein Homology CDS 58568 59269 . + 0 ID=cds-WP_000170628.1;Parent=gene-CCO35_RS14295;Dbxref=GenBank:WP_000170628.1;Name=WP_000170628.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=CCO35_RS14295;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170628.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 59278 59922 . + . ID=gene-CCO35_RS14300;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=CCO35_RS14300;old_locus_tag=CCO35_14290 NZ_NPME01000004.1 Protein Homology CDS 59278 59922 . + 0 ID=cds-WP_000781187.1;Parent=gene-CCO35_RS14300;Dbxref=GenBank:WP_000781187.1;Name=WP_000781187.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=CCO35_RS14300;product=maleylacetoacetate isomerase;protein_id=WP_000781187.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 59937 61130 . + . ID=gene-CCO35_RS14305;Name=CCO35_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14305;old_locus_tag=CCO35_14295 NZ_NPME01000004.1 Protein Homology CDS 59937 61130 . + 0 ID=cds-WP_000150099.1;Parent=gene-CCO35_RS14305;Dbxref=GenBank:WP_000150099.1;Name=WP_000150099.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=CCO35_RS14305;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150099.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 61239 62177 . + . ID=gene-CCO35_RS14310;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=CCO35_RS14310;old_locus_tag=CCO35_14300 NZ_NPME01000004.1 Protein Homology CDS 61239 62177 . + 0 ID=cds-WP_001264834.1;Parent=gene-CCO35_RS14310;Dbxref=GenBank:WP_001264834.1;Name=WP_001264834.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=CCO35_RS14310;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264834.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 62235 62318 . - . ID=gene-CCO35_RS24355;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=CCO35_RS24355;old_locus_tag=CCO35_14305 NZ_NPME01000004.1 Protein Homology CDS 62235 62318 . - 0 ID=cds-WP_000698460.1;Parent=gene-CCO35_RS24355;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=CCO35_RS24355;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 62636 64072 . + . ID=gene-CCO35_RS14320;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=CCO35_RS14320;old_locus_tag=CCO35_14310 NZ_NPME01000004.1 Protein Homology CDS 62636 64072 . + 0 ID=cds-WP_001081457.1;Parent=gene-CCO35_RS14320;Dbxref=GenBank:WP_001081457.1;Name=WP_001081457.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=CCO35_RS14320;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001081457.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 64138 64899 . + . ID=gene-CCO35_RS14325;Name=CCO35_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14325;old_locus_tag=CCO35_14315 NZ_NPME01000004.1 Protein Homology CDS 64138 64899 . + 0 ID=cds-WP_000169617.1;Parent=gene-CCO35_RS14325;Dbxref=GenBank:WP_000169617.1;Name=WP_000169617.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=CCO35_RS14325;product=SDR family oxidoreductase;protein_id=WP_000169617.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 64947 65516 . - . ID=gene-CCO35_RS14330;Name=CCO35_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14330;old_locus_tag=CCO35_14320 NZ_NPME01000004.1 Protein Homology CDS 64947 65516 . - 0 ID=cds-WP_001530335.1;Parent=gene-CCO35_RS14330;Dbxref=GenBank:WP_001530335.1;Name=WP_001530335.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=CCO35_RS14330;product=DedA family protein;protein_id=WP_001530335.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 65675 66262 . + . ID=gene-CCO35_RS14335;Name=CCO35_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14335;old_locus_tag=CCO35_14325 NZ_NPME01000004.1 Protein Homology CDS 65675 66262 . + 0 ID=cds-WP_001017057.1;Parent=gene-CCO35_RS14335;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=CCO35_RS14335;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 66428 67375 . + . ID=gene-CCO35_RS14345;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=CCO35_RS14345;old_locus_tag=CCO35_14335 NZ_NPME01000004.1 Protein Homology CDS 66428 67375 . + 0 ID=cds-WP_000911551.1;Parent=gene-CCO35_RS14345;Dbxref=GenBank:WP_000911551.1;Name=WP_000911551.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=CCO35_RS14345;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911551.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 67434 69164 . - . ID=gene-CCO35_RS14350;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=CCO35_RS14350;old_locus_tag=CCO35_14340 NZ_NPME01000004.1 Protein Homology CDS 67434 69164 . - 0 ID=cds-WP_000095235.1;Parent=gene-CCO35_RS14350;Dbxref=GenBank:WP_000095235.1;Name=WP_000095235.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=CCO35_RS14350;product=D-lactate dehydrogenase;protein_id=WP_000095235.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 69431 71728 . + . ID=gene-CCO35_RS14355;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=CCO35_RS14355;old_locus_tag=CCO35_14345 NZ_NPME01000004.1 Protein Homology CDS 69431 71728 . + 0 ID=cds-WP_000871554.1;Parent=gene-CCO35_RS14355;Dbxref=GenBank:WP_000871554.1;Name=WP_000871554.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=CCO35_RS14355;product=beta-glucosidase BglX;protein_id=WP_000871554.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 71909 72826 . + . ID=gene-CCO35_RS14360;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=CCO35_RS14360;old_locus_tag=CCO35_14350 NZ_NPME01000004.1 Protein Homology CDS 71909 72826 . + 0 ID=cds-WP_000155876.1;Parent=gene-CCO35_RS14360;Dbxref=GenBank:WP_000155876.1;Name=WP_000155876.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=CCO35_RS14360;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155876.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 72830 73999 . + . ID=gene-CCO35_RS14365;Name=CCO35_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14365;old_locus_tag=CCO35_14355 NZ_NPME01000004.1 Protein Homology CDS 72830 73999 . + 0 ID=cds-WP_001278113.1;Parent=gene-CCO35_RS14365;Dbxref=GenBank:WP_001278113.1;Name=WP_001278113.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=CCO35_RS14365;product=ABC transporter permease;protein_id=WP_001278113.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 73992 74939 . + . ID=gene-CCO35_RS14370;Name=CCO35_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14370;old_locus_tag=CCO35_14360 NZ_NPME01000004.1 Protein Homology CDS 73992 74939 . + 0 ID=cds-WP_000569166.1;Parent=gene-CCO35_RS14370;Dbxref=GenBank:WP_000569166.1;Name=WP_000569166.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=CCO35_RS14370;product=ABC transporter ATP-binding protein;protein_id=WP_000569166.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 74923 75654 . + . ID=gene-CCO35_RS14375;Name=CCO35_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14375;old_locus_tag=CCO35_14365 NZ_NPME01000004.1 Protein Homology CDS 74923 75654 . + 0 ID=cds-WP_000824854.1;Parent=gene-CCO35_RS14375;Dbxref=GenBank:WP_000824854.1;Name=WP_000824854.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=CCO35_RS14375;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 75635 75742 . - . ID=gene-CCO35_RS14380;Name=CCO35_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14380;old_locus_tag=CCO35_14370 NZ_NPME01000004.1 Protein Homology CDS 75635 75742 . - 0 ID=cds-WP_001261696.1;Parent=gene-CCO35_RS14380;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=CCO35_RS14380;product=protein YohO;protein_id=WP_001261696.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 75802 76533 . - . ID=gene-CCO35_RS14385;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=CCO35_RS14385;old_locus_tag=CCO35_14375 NZ_NPME01000004.1 Protein Homology CDS 75802 76533 . - 0 ID=cds-WP_001240416.1;Parent=gene-CCO35_RS14385;Dbxref=GenBank:WP_001240416.1;Name=WP_001240416.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=CCO35_RS14385;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240416.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 76756 78441 . + . ID=gene-CCO35_RS14390;Name=CCO35_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14390;old_locus_tag=CCO35_14380 NZ_NPME01000004.1 Protein Homology CDS 76756 78441 . + 0 ID=cds-WP_000272850.1;Parent=gene-CCO35_RS14390;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=CCO35_RS14390;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 78438 79157 . + . ID=gene-CCO35_RS14395;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=CCO35_RS14395;old_locus_tag=CCO35_14385 NZ_NPME01000004.1 Protein Homology CDS 78438 79157 . + 0 ID=cds-WP_000598639.1;Parent=gene-CCO35_RS14395;Dbxref=GenBank:WP_000598639.1;Name=WP_000598639.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=CCO35_RS14395;product=two-component system response regulator BtsR;protein_id=WP_000598639.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 79204 79671 . + . ID=gene-CCO35_RS14400;Name=CCO35_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14400;old_locus_tag=CCO35_14390 NZ_NPME01000004.1 Protein Homology CDS 79204 79671 . + 0 ID=cds-WP_000950413.1;Parent=gene-CCO35_RS14400;Dbxref=GenBank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=CCO35_RS14400;product=DUF1456 family protein;protein_id=WP_000950413.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 79728 80258 . - . ID=gene-CCO35_RS14405;Name=CCO35_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14405;old_locus_tag=CCO35_14395 NZ_NPME01000004.1 Protein Homology CDS 79728 80258 . - 0 ID=cds-WP_001221799.1;Parent=gene-CCO35_RS14405;Dbxref=GenBank:WP_001221799.1;Name=WP_001221799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=CCO35_RS14405;product=YehR family lipoprotein;protein_id=WP_001221799.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 80430 80888 . - . ID=gene-CCO35_RS14410;Name=CCO35_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14410;old_locus_tag=CCO35_14400 NZ_NPME01000004.1 Protein Homology CDS 80430 80888 . - 0 ID=cds-WP_000703136.1;Parent=gene-CCO35_RS14410;Dbxref=GenBank:WP_000703136.1;Name=WP_000703136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=CCO35_RS14410;product=YehR family lipoprotein;protein_id=WP_000703136.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 81129 83162 . - . ID=gene-CCO35_RS14415;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CCO35_RS14415;old_locus_tag=CCO35_14405 NZ_NPME01000004.1 Protein Homology CDS 81129 83162 . - 0 ID=cds-WP_000195336.1;Parent=gene-CCO35_RS14415;Dbxref=GenBank:WP_000195336.1;Name=WP_000195336.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=CCO35_RS14415;product=methionine--tRNA ligase;protein_id=WP_000195336.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 83327 84436 . + . ID=gene-CCO35_RS14420;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=CCO35_RS14420;old_locus_tag=CCO35_14410 NZ_NPME01000004.1 Protein Homology CDS 83327 84436 . + 0 ID=cds-WP_001005428.1;Parent=gene-CCO35_RS14420;Dbxref=GenBank:WP_001005428.1;Name=WP_001005428.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=CCO35_RS14420;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005428.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 84703 84984 . + . ID=gene-CCO35_RS14425;Name=CCO35_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14425;old_locus_tag=CCO35_14415 NZ_NPME01000004.1 Protein Homology CDS 84703 84984 . + 0 ID=cds-WP_001543027.1;Parent=gene-CCO35_RS14425;Dbxref=GenBank:WP_001543027.1;Name=WP_001543027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760407.1;locus_tag=CCO35_RS14425;product=DUF2574 family protein;protein_id=WP_001543027.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 85263 85805 . + . ID=gene-CCO35_RS14430;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=CCO35_RS14430;old_locus_tag=CCO35_14420 NZ_NPME01000004.1 Protein Homology CDS 85263 85805 . + 0 ID=cds-WP_000830496.1;Parent=gene-CCO35_RS14430;Dbxref=GenBank:WP_000830496.1;Name=WP_000830496.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683844.1;locus_tag=CCO35_RS14430;product=fimbrial protein YehD;protein_id=WP_000830496.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 85857 86540 . + . ID=gene-CCO35_RS14435;Name=CCO35_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14435;old_locus_tag=CCO35_14425 NZ_NPME01000004.1 Protein Homology CDS 85857 86540 . + 0 ID=cds-WP_000675776.1;Parent=gene-CCO35_RS14435;Dbxref=GenBank:WP_000675776.1;Name=WP_000675776.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675777.1;locus_tag=CCO35_RS14435;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000675776.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 86553 89033 . + . ID=gene-CCO35_RS14440;Name=CCO35_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14440;old_locus_tag=CCO35_14430 NZ_NPME01000004.1 Protein Homology CDS 86553 89033 . + 0 ID=cds-WP_000945356.1;Parent=gene-CCO35_RS14440;Dbxref=GenBank:WP_000945356.1;Name=WP_000945356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310942.1;locus_tag=CCO35_RS14440;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000945356.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 89042 90049 . + . ID=gene-CCO35_RS14445;Name=CCO35_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14445;old_locus_tag=CCO35_14435 NZ_NPME01000004.1 Protein Homology CDS 89042 90049 . + 0 ID=cds-WP_001269814.1;Parent=gene-CCO35_RS14445;Dbxref=GenBank:WP_001269814.1;Name=WP_001269814.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269814.1;locus_tag=CCO35_RS14445;product=fimbrial protein;protein_id=WP_001269814.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 90091 90405 . - . ID=gene-CCO35_RS14450;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=CCO35_RS14450;old_locus_tag=CCO35_14440 NZ_NPME01000004.1 Protein Homology CDS 90091 90405 . - 0 ID=cds-WP_000837534.1;Parent=gene-CCO35_RS14450;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=CCO35_RS14450;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11 NZ_NPME01000004.1 cmsearch riboswitch 90687 90783 . + . ID=id-NZ_NPME01000004.1:90687..90783;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPME01000004.1 RefSeq gene 90815 91612 . + . ID=gene-CCO35_RS14455;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CCO35_RS14455;old_locus_tag=CCO35_14445 NZ_NPME01000004.1 Protein Homology CDS 90815 91612 . + 0 ID=cds-WP_001182169.1;Parent=gene-CCO35_RS14455;Dbxref=GenBank:WP_001182169.1;Name=WP_001182169.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=CCO35_RS14455;product=hydroxyethylthiazole kinase;protein_id=WP_001182169.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 91599 92399 . + . ID=gene-CCO35_RS14460;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CCO35_RS14460;old_locus_tag=CCO35_14450 NZ_NPME01000004.1 Protein Homology CDS 91599 92399 . + 0 ID=cds-WP_000822247.1;Parent=gene-CCO35_RS14460;Dbxref=GenBank:WP_000822247.1;Name=WP_000822247.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=CCO35_RS14460;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000822247.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 92435 93181 . + . ID=gene-CCO35_RS14465;Name=CCO35_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14465;old_locus_tag=CCO35_14455 NZ_NPME01000004.1 Protein Homology CDS 92435 93181 . + 0 ID=cds-WP_000434059.1;Parent=gene-CCO35_RS14465;Dbxref=GenBank:WP_000434059.1;Name=WP_000434059.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=CCO35_RS14465;product=GntR family transcriptional regulator;protein_id=WP_000434059.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 93155 94120 . - . ID=gene-CCO35_RS14470;Name=CCO35_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14470;old_locus_tag=CCO35_14460 NZ_NPME01000004.1 Protein Homology CDS 93155 94120 . - 0 ID=cds-WP_001012651.1;Parent=gene-CCO35_RS14470;Dbxref=GenBank:WP_001012651.1;Name=WP_001012651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=CCO35_RS14470;product=PfkB family carbohydrate kinase;protein_id=WP_001012651.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 94117 95121 . - . ID=gene-CCO35_RS14475;Name=CCO35_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14475;old_locus_tag=CCO35_14465 NZ_NPME01000004.1 Protein Homology CDS 94117 95121 . - 0 ID=cds-WP_000642800.1;Parent=gene-CCO35_RS14475;Dbxref=GenBank:WP_000642800.1;Name=WP_000642800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=CCO35_RS14475;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642800.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 95118 96389 . - . ID=gene-CCO35_RS14480;Name=CCO35_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14480;old_locus_tag=CCO35_14470 NZ_NPME01000004.1 Protein Homology CDS 95118 96389 . - 0 ID=cds-WP_000858692.1;Parent=gene-CCO35_RS14480;Dbxref=GenBank:WP_000858692.1;Name=WP_000858692.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=CCO35_RS14480;product=nucleoside permease;protein_id=WP_000858692.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 96643 97695 . + . ID=gene-CCO35_RS14485;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=CCO35_RS14485;old_locus_tag=CCO35_14475 NZ_NPME01000004.1 Protein Homology CDS 96643 97695 . + 0 ID=cds-WP_000129590.1;Parent=gene-CCO35_RS14485;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=CCO35_RS14485;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 97748 98647 . - . ID=gene-CCO35_RS14490;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=CCO35_RS14490;old_locus_tag=CCO35_14480 NZ_NPME01000004.1 Protein Homology CDS 97748 98647 . - 0 ID=cds-WP_001273393.1;Parent=gene-CCO35_RS14490;Dbxref=GenBank:WP_001273393.1;Name=WP_001273393.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=CCO35_RS14490;product=lipid kinase YegS;protein_id=WP_001273393.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 99206 99541 . + . ID=gene-CCO35_RS14495;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=CCO35_RS14495;old_locus_tag=CCO35_14485 NZ_NPME01000004.1 Protein Homology CDS 99206 99541 . + 0 ID=cds-WP_001612048.1;Parent=gene-CCO35_RS14495;Dbxref=GenBank:WP_001612048.1;Name=WP_001612048.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=CCO35_RS14495;product=type III secretion system effector SteD;protein_id=WP_001612048.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 99663 100079 . + . ID=gene-CCO35_RS14500;Name=CCO35_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14500;old_locus_tag=CCO35_14490 NZ_NPME01000004.1 Protein Homology CDS 99663 100079 . + 0 ID=cds-WP_001552120.1;Parent=gene-CCO35_RS14500;Dbxref=GenBank:WP_001552120.1;Name=WP_001552120.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=CCO35_RS14500;product=CesT family type III secretion system chaperone;protein_id=WP_001552120.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 100089 100268 . - . ID=gene-CCO35_RS14505;Name=CCO35_RS14505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS14505;old_locus_tag=CCO35_14495;partial=true;pseudo=true;start_range=.,100089 NZ_NPME01000004.1 Protein Homology CDS 100089 100268 . - 0 ID=cds-CCO35_RS14505;Parent=gene-CCO35_RS14505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=CCO35_RS14505;partial=true;product=non-LEE encoded effector protein NleB;pseudo=true;start_range=.,100089;transl_table=11 NZ_NPME01000004.1 RefSeq gene 100719 102080 . - . ID=gene-CCO35_RS14510;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=CCO35_RS14510;old_locus_tag=CCO35_14500 NZ_NPME01000004.1 Protein Homology CDS 100719 102080 . - 0 ID=cds-WP_001517981.1;Parent=gene-CCO35_RS14510;Dbxref=GenBank:WP_001517981.1;Name=WP_001517981.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=CCO35_RS14510;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_001517981.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 102196 104307 . - . ID=gene-CCO35_RS14515;Name=CCO35_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14515;old_locus_tag=CCO35_14505 NZ_NPME01000004.1 Protein Homology CDS 102196 104307 . - 0 ID=cds-WP_000434799.1;Parent=gene-CCO35_RS14515;Dbxref=GenBank:WP_000434799.1;Name=WP_000434799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=CCO35_RS14515;product=DUF4034 domain-containing protein;protein_id=WP_000434799.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 104318 105034 . - . ID=gene-CCO35_RS14520;Name=CCO35_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14520;old_locus_tag=CCO35_14510 NZ_NPME01000004.1 Protein Homology CDS 104318 105034 . - 0 ID=cds-WP_000498590.1;Parent=gene-CCO35_RS14520;Dbxref=GenBank:WP_000498590.1;Name=WP_000498590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=CCO35_RS14520;product=DUF1266 domain-containing protein;protein_id=WP_000498590.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 105034 106236 . - . ID=gene-CCO35_RS14525;Name=CCO35_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14525;old_locus_tag=CCO35_14515 NZ_NPME01000004.1 Protein Homology CDS 105034 106236 . - 0 ID=cds-WP_001606211.1;Parent=gene-CCO35_RS14525;Dbxref=GenBank:WP_001606211.1;Name=WP_001606211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141079.1;locus_tag=CCO35_RS14525;product=hypothetical protein;protein_id=WP_001606211.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 106505 107227 . - . ID=gene-CCO35_RS14535;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=CCO35_RS14535;old_locus_tag=CCO35_14525 NZ_NPME01000004.1 Protein Homology CDS 106505 107227 . - 0 ID=cds-WP_000137854.1;Parent=gene-CCO35_RS14535;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=CCO35_RS14535;product=two-component system response regulator BaeR;protein_id=WP_000137854.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 107224 108627 . - . ID=gene-CCO35_RS14540;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=CCO35_RS14540;old_locus_tag=CCO35_14530 NZ_NPME01000004.1 Protein Homology CDS 107224 108627 . - 0 ID=cds-WP_023231099.1;Parent=gene-CCO35_RS14540;Dbxref=GenBank:WP_023231099.1;Name=WP_023231099.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=CCO35_RS14540;product=two-component system sensor histidine kinase BaeS;protein_id=WP_023231099.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 108627 110039 . - . ID=gene-CCO35_RS14545;Name=CCO35_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14545;old_locus_tag=CCO35_14535 NZ_NPME01000004.1 Protein Homology CDS 108627 110039 . - 0 ID=cds-WP_023231098.1;Parent=gene-CCO35_RS14545;Dbxref=GenBank:WP_023231098.1;Name=WP_023231098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=CCO35_RS14545;product=MFS transporter;protein_id=WP_023231098.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 110036 113116 . - . ID=gene-CCO35_RS14550;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=CCO35_RS14550;old_locus_tag=CCO35_14540 NZ_NPME01000004.1 Protein Homology CDS 110036 113116 . - 0 ID=cds-WP_023217261.1;Parent=gene-CCO35_RS14550;Dbxref=GenBank:WP_023217261.1;Name=WP_023217261.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=CCO35_RS14550;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_023217261.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 113117 116239 . - . ID=gene-CCO35_RS14555;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=CCO35_RS14555;old_locus_tag=CCO35_14545 NZ_NPME01000004.1 Protein Homology CDS 113117 116239 . - 0 ID=cds-WP_031567813.1;Parent=gene-CCO35_RS14555;Dbxref=GenBank:WP_031567813.1;Name=WP_031567813.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=CCO35_RS14555;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_031567813.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 116239 117480 . - . ID=gene-CCO35_RS14560;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=CCO35_RS14560;old_locus_tag=CCO35_14550 NZ_NPME01000004.1 Protein Homology CDS 116239 117480 . - 0 ID=cds-WP_000678813.1;Parent=gene-CCO35_RS14560;Dbxref=GenBank:WP_000678813.1;Name=WP_000678813.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=CCO35_RS14560;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678813.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 117763 117822 . + . ID=gene-CCO35_RS23680;Name=CCO35_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23680 NZ_NPME01000004.1 Protein Homology CDS 117763 117822 . + 0 ID=cds-WP_105887528.1;Parent=gene-CCO35_RS23680;Dbxref=GenBank:WP_105887528.1;Name=WP_105887528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=CCO35_RS23680;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_105887528.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 117921 119273 . - . ID=gene-CCO35_RS14565;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=CCO35_RS14565;old_locus_tag=CCO35_14555 NZ_NPME01000004.1 Protein Homology CDS 117921 119273 . - 0 ID=cds-WP_000469623.1;Parent=gene-CCO35_RS14565;Dbxref=GenBank:WP_000469623.1;Name=WP_000469623.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=CCO35_RS14565;product=molecular chaperone;protein_id=WP_000469623.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 119407 120276 . + . ID=gene-CCO35_RS14575;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=CCO35_RS14575;old_locus_tag=CCO35_14565 NZ_NPME01000004.1 Protein Homology CDS 119407 120276 . + 0 ID=cds-WP_023207356.1;Parent=gene-CCO35_RS14575;Dbxref=GenBank:WP_023207356.1;Name=WP_023207356.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=CCO35_RS14575;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_023207356.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 120244 123234 . - . ID=gene-CCO35_RS14580;Name=CCO35_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14580;old_locus_tag=CCO35_14570 NZ_NPME01000004.1 Protein Homology CDS 120244 123234 . - 0 ID=cds-WP_031567818.1;Parent=gene-CCO35_RS14580;Dbxref=GenBank:WP_031567818.1;Name=WP_031567818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=CCO35_RS14580;product=MASE1 domain-containing protein;protein_id=WP_031567818.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 123565 124206 . + . ID=gene-CCO35_RS14585;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CCO35_RS14585;old_locus_tag=CCO35_14575 NZ_NPME01000004.1 Protein Homology CDS 123565 124206 . + 0 ID=cds-WP_000132082.1;Parent=gene-CCO35_RS14585;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=CCO35_RS14585;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 124297 124878 . + . ID=gene-CCO35_RS14590;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CCO35_RS14590;old_locus_tag=CCO35_14580 NZ_NPME01000004.1 Protein Homology CDS 124297 124878 . + 0 ID=cds-WP_001234783.1;Parent=gene-CCO35_RS14590;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=CCO35_RS14590;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 124917 126773 . + . ID=gene-CCO35_RS14595;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=CCO35_RS14595;old_locus_tag=CCO35_14585 NZ_NPME01000004.1 Protein Homology CDS 124917 126773 . + 0 ID=cds-WP_031567820.1;Parent=gene-CCO35_RS14595;Dbxref=GenBank:WP_031567820.1;Name=WP_031567820.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=CCO35_RS14595;product=outer membrane assembly protein AsmA;protein_id=WP_031567820.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 126859 128439 . - . ID=gene-CCO35_RS14600;Name=CCO35_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14600;old_locus_tag=CCO35_14590 NZ_NPME01000004.1 Protein Homology CDS 126859 128439 . - 0 ID=cds-WP_000454714.1;Parent=gene-CCO35_RS14600;Dbxref=GenBank:WP_000454714.1;Name=WP_000454714.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=CCO35_RS14600;product=TerC family protein;protein_id=WP_000454714.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 129114 130253 . + . ID=gene-CCO35_RS14610;Name=CCO35_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14610;old_locus_tag=CCO35_14600 NZ_NPME01000004.1 Protein Homology CDS 129114 130253 . + 0 ID=cds-WP_000978077.1;Parent=gene-CCO35_RS14610;Dbxref=GenBank:WP_000978077.1;Name=WP_000978077.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=CCO35_RS14610;product=polysaccharide export protein;protein_id=WP_000978077.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 130259 130708 . + . ID=gene-CCO35_RS14615;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=CCO35_RS14615;old_locus_tag=CCO35_14605 NZ_NPME01000004.1 Protein Homology CDS 130259 130708 . + 0 ID=cds-WP_000482224.1;Parent=gene-CCO35_RS14615;Dbxref=GenBank:WP_000482224.1;Name=WP_000482224.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=CCO35_RS14615;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482224.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 130705 132864 . + . ID=gene-CCO35_RS14620;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=CCO35_RS14620;old_locus_tag=CCO35_14610 NZ_NPME01000004.1 Protein Homology CDS 130705 132864 . + 0 ID=cds-WP_000137232.1;Parent=gene-CCO35_RS14620;Dbxref=GenBank:WP_000137232.1;Name=WP_000137232.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=CCO35_RS14620;product=tyrosine-protein kinase Wzc;protein_id=WP_000137232.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 132951 133793 . + . ID=gene-CCO35_RS14625;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=CCO35_RS14625;old_locus_tag=CCO35_14615 NZ_NPME01000004.1 Protein Homology CDS 132951 133793 . + 0 ID=cds-WP_000205695.1;Parent=gene-CCO35_RS14625;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=CCO35_RS14625;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 133796 134284 . + . ID=gene-CCO35_RS14630;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=CCO35_RS14630;old_locus_tag=CCO35_14620 NZ_NPME01000004.1 Protein Homology CDS 133796 134284 . + 0 ID=cds-WP_000888724.1;Parent=gene-CCO35_RS14630;Dbxref=GenBank:WP_000888724.1;Name=WP_000888724.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=CCO35_RS14630;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888724.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 134281 135498 . + . ID=gene-CCO35_RS14635;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=CCO35_RS14635;old_locus_tag=CCO35_14625 NZ_NPME01000004.1 Protein Homology CDS 134281 135498 . + 0 ID=cds-WP_023202787.1;Parent=gene-CCO35_RS14635;Dbxref=GenBank:WP_023202787.1;Name=WP_023202787.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=CCO35_RS14635;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_023202787.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 135473 136687 . + . ID=gene-CCO35_RS14640;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=CCO35_RS14640;old_locus_tag=CCO35_14630 NZ_NPME01000004.1 Protein Homology CDS 135473 136687 . + 0 ID=cds-WP_000091402.1;Parent=gene-CCO35_RS14640;Dbxref=GenBank:WP_000091402.1;Name=WP_000091402.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=CCO35_RS14640;product=colanic acid polymerase WcaD;protein_id=WP_000091402.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 136700 137446 . + . ID=gene-CCO35_RS14645;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=CCO35_RS14645;old_locus_tag=CCO35_14635 NZ_NPME01000004.1 Protein Homology CDS 136700 137446 . + 0 ID=cds-WP_000480134.1;Parent=gene-CCO35_RS14645;Dbxref=GenBank:WP_000480134.1;Name=WP_000480134.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=CCO35_RS14645;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000480134.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 137462 138016 . + . ID=gene-CCO35_RS14650;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=CCO35_RS14650;old_locus_tag=CCO35_14640 NZ_NPME01000004.1 Protein Homology CDS 137462 138016 . + 0 ID=cds-WP_001153603.1;Parent=gene-CCO35_RS14650;Dbxref=GenBank:WP_001153603.1;Name=WP_001153603.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=CCO35_RS14650;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153603.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 138040 139161 . + . ID=gene-CCO35_RS14655;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=CCO35_RS14655;old_locus_tag=CCO35_14645 NZ_NPME01000004.1 Protein Homology CDS 138040 139161 . + 0 ID=cds-WP_000048160.1;Parent=gene-CCO35_RS14655;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=CCO35_RS14655;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 139164 140129 . + . ID=gene-CCO35_RS14660;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=CCO35_RS14660;old_locus_tag=CCO35_14650 NZ_NPME01000004.1 Protein Homology CDS 139164 140129 . + 0 ID=cds-WP_031567823.1;Parent=gene-CCO35_RS14660;Dbxref=GenBank:WP_031567823.1;Name=WP_031567823.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=CCO35_RS14660;product=GDP-L-fucose synthase;protein_id=WP_031567823.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 140132 140605 . + . ID=gene-CCO35_RS14665;Name=CCO35_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14665;old_locus_tag=CCO35_14655 NZ_NPME01000004.1 Protein Homology CDS 140132 140605 . + 0 ID=cds-WP_023243991.1;Parent=gene-CCO35_RS14665;Dbxref=GenBank:WP_023243991.1;Name=WP_023243991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=CCO35_RS14665;product=GDP-mannose mannosyl hydrolase;protein_id=WP_023243991.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 140602 141825 . + . ID=gene-CCO35_RS14670;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=CCO35_RS14670;old_locus_tag=CCO35_14660 NZ_NPME01000004.1 Protein Homology CDS 140602 141825 . + 0 ID=cds-WP_094965358.1;Parent=gene-CCO35_RS14670;Dbxref=GenBank:WP_094965358.1;Name=WP_094965358.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=CCO35_RS14670;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_094965358.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 141822 143264 . + . ID=gene-CCO35_RS14675;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=CCO35_RS14675;old_locus_tag=CCO35_14665 NZ_NPME01000004.1 Protein Homology CDS 141822 143264 . + 0 ID=cds-WP_000605955.1;Parent=gene-CCO35_RS14675;Dbxref=GenBank:WP_000605955.1;Name=WP_000605955.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=CCO35_RS14675;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000605955.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 143375 144745 . + . ID=gene-CCO35_RS14680;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=CCO35_RS14680;old_locus_tag=CCO35_14670 NZ_NPME01000004.1 Protein Homology CDS 143375 144745 . + 0 ID=cds-WP_000164192.1;Parent=gene-CCO35_RS14680;Dbxref=GenBank:WP_000164192.1;Name=WP_000164192.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=CCO35_RS14680;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_000164192.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 144799 146193 . + . ID=gene-CCO35_RS14685;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=CCO35_RS14685;old_locus_tag=CCO35_14675 NZ_NPME01000004.1 Protein Homology CDS 144799 146193 . + 0 ID=cds-WP_000183163.1;Parent=gene-CCO35_RS14685;Dbxref=GenBank:WP_000183163.1;Name=WP_000183163.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=CCO35_RS14685;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183163.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 146326 147804 . + . ID=gene-CCO35_RS14690;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=CCO35_RS14690;old_locus_tag=CCO35_14680 NZ_NPME01000004.1 Protein Homology CDS 146326 147804 . + 0 ID=cds-WP_000058681.1;Parent=gene-CCO35_RS14690;Dbxref=GenBank:WP_000058681.1;Name=WP_000058681.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=CCO35_RS14690;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_000058681.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 147826 149106 . + . ID=gene-CCO35_RS14695;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=CCO35_RS14695;old_locus_tag=CCO35_14685 NZ_NPME01000004.1 Protein Homology CDS 147826 149106 . + 0 ID=cds-WP_000770915.1;Parent=gene-CCO35_RS14695;Dbxref=GenBank:WP_000770915.1;Name=WP_000770915.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=CCO35_RS14695;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_000770915.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 149103 150323 . + . ID=gene-CCO35_RS14700;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=CCO35_RS14700;old_locus_tag=CCO35_14690 NZ_NPME01000004.1 Protein Homology CDS 149103 150323 . + 0 ID=cds-WP_000868508.1;Parent=gene-CCO35_RS14700;Dbxref=GenBank:WP_000868508.1;Name=WP_000868508.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=CCO35_RS14700;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_000868508.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 150334 151737 . + . ID=gene-CCO35_RS14705;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=CCO35_RS14705;old_locus_tag=CCO35_14695 NZ_NPME01000004.1 Protein Homology CDS 150334 151737 . + 0 ID=cds-WP_001111834.1;Parent=gene-CCO35_RS14705;Dbxref=GenBank:WP_001111834.1;Name=WP_001111834.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=CCO35_RS14705;product=colanic acid biosynthesis protein WcaM;protein_id=WP_001111834.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 151915 152808 . + . ID=gene-CCO35_RS14710;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=CCO35_RS14710;old_locus_tag=CCO35_14700 NZ_NPME01000004.1 Protein Homology CDS 151915 152808 . + 0 ID=cds-WP_000981469.1;Parent=gene-CCO35_RS14710;Dbxref=GenBank:WP_000981469.1;Name=WP_000981469.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=CCO35_RS14710;product=GalU regulator GalF;protein_id=WP_000981469.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 153185 154270 . + . ID=gene-CCO35_RS14715;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=CCO35_RS14715;old_locus_tag=CCO35_14705 NZ_NPME01000004.1 Protein Homology CDS 153185 154270 . + 0 ID=cds-WP_000697842.1;Parent=gene-CCO35_RS14715;Dbxref=GenBank:WP_000697842.1;Name=WP_000697842.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=CCO35_RS14715;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000697842.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 154270 155169 . + . ID=gene-CCO35_RS14720;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=CCO35_RS14720;old_locus_tag=CCO35_14710 NZ_NPME01000004.1 Protein Homology CDS 154270 155169 . + 0 ID=cds-WP_001023662.1;Parent=gene-CCO35_RS14720;Dbxref=GenBank:WP_001023662.1;Name=WP_001023662.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=CCO35_RS14720;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_001023662.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 155217 156095 . + . ID=gene-CCO35_RS14725;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CCO35_RS14725;old_locus_tag=CCO35_14715 NZ_NPME01000004.1 Protein Homology CDS 155217 156095 . + 0 ID=cds-WP_001612007.1;Parent=gene-CCO35_RS14725;Dbxref=GenBank:WP_001612007.1;Name=WP_001612007.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707934.1;locus_tag=CCO35_RS14725;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_001612007.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 156100 156630 . + . ID=gene-CCO35_RS14730;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=CCO35_RS14730;old_locus_tag=CCO35_14720 NZ_NPME01000004.1 Protein Homology CDS 156100 156630 . + 0 ID=cds-WP_001100807.1;Parent=gene-CCO35_RS14730;Dbxref=GenBank:WP_001100807.1;Name=WP_001100807.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100812.1;locus_tag=CCO35_RS14730;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_001100807.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 156978 158516 . + . ID=gene-CCO35_RS14735;Name=CCO35_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14735;old_locus_tag=CCO35_14725 NZ_NPME01000004.1 Protein Homology CDS 156978 158516 . + 0 ID=cds-WP_000489515.1;Parent=gene-CCO35_RS14735;Dbxref=GenBank:WP_000489515.1;Name=WP_000489515.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000489516.1;locus_tag=CCO35_RS14735;product=lipopolysaccharide biosynthesis protein;protein_id=WP_000489515.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 158705 159883 . + . ID=gene-CCO35_RS14740;Name=CCO35_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14740;old_locus_tag=CCO35_14730 NZ_NPME01000004.1 Protein Homology CDS 158705 159883 . + 0 ID=cds-WP_023231088.1;Parent=gene-CCO35_RS14740;Dbxref=GenBank:WP_023231088.1;Name=WP_023231088.1;Ontology_term=GO:0008755,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=O antigen polymerase activity|0008755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000231471.1;locus_tag=CCO35_RS14740;product=O-antigen polymerase;protein_id=WP_023231088.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 159891 160961 . + . ID=gene-CCO35_RS14745;Name=CCO35_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14745;old_locus_tag=CCO35_14735 NZ_NPME01000004.1 Protein Homology CDS 159891 160961 . + 0 ID=cds-WP_225090904.1;Parent=gene-CCO35_RS14745;Dbxref=GenBank:WP_225090904.1;Name=WP_225090904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000549718.1;locus_tag=CCO35_RS14745;product=glycosyltransferase;protein_id=WP_225090904.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 160965 161912 . + . ID=gene-CCO35_RS14750;Name=CCO35_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14750;old_locus_tag=CCO35_14740 NZ_NPME01000004.1 Protein Homology CDS 160965 161912 . + 0 ID=cds-WP_001138990.1;Parent=gene-CCO35_RS14750;Dbxref=GenBank:WP_001138990.1;Name=WP_001138990.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138993.1;locus_tag=CCO35_RS14750;product=glycosyltransferase family 2 protein;protein_id=WP_001138990.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 161913 163352 . + . ID=gene-CCO35_RS14755;Name=CCO35_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14755;old_locus_tag=CCO35_14745 NZ_NPME01000004.1 Protein Homology CDS 161913 163352 . + 0 ID=cds-WP_023231086.1;Parent=gene-CCO35_RS14755;Dbxref=GenBank:WP_023231086.1;Name=WP_023231086.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=CCO35_RS14755;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_023231086.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 163339 164772 . + . ID=gene-CCO35_RS14760;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=CCO35_RS14760;old_locus_tag=CCO35_14750 NZ_NPME01000004.1 Protein Homology CDS 163339 164772 . + 0 ID=cds-WP_001103634.1;Parent=gene-CCO35_RS14760;Dbxref=GenBank:WP_001103634.1;Name=WP_001103634.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103634.1;locus_tag=CCO35_RS14760;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WP_001103634.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 164844 166274 . + . ID=gene-CCO35_RS14765;Name=CCO35_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14765;old_locus_tag=CCO35_14755 NZ_NPME01000004.1 Protein Homology CDS 164844 166274 . + 0 ID=cds-WP_000368704.1;Parent=gene-CCO35_RS14765;Dbxref=GenBank:WP_000368704.1;Name=WP_000368704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=CCO35_RS14765;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WP_000368704.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 166449 167555 . + . ID=gene-CCO35_RS14770;Name=CCO35_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14770;old_locus_tag=CCO35_14760 NZ_NPME01000004.1 Protein Homology CDS 166449 167555 . + 0 ID=cds-WP_000137016.1;Parent=gene-CCO35_RS14770;Dbxref=GenBank:WP_000137016.1;Name=WP_000137016.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137016.1;locus_tag=CCO35_RS14770;product=acyltransferase family protein;protein_id=WP_000137016.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 167807 169213 . + . ID=gene-CCO35_RS14775;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=CCO35_RS14775;old_locus_tag=CCO35_14765 NZ_NPME01000004.1 Protein Homology CDS 167807 169213 . + 0 ID=cds-WP_000043532.1;Parent=gene-CCO35_RS14775;Dbxref=GenBank:WP_000043532.1;Name=WP_000043532.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=CCO35_RS14775;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043532.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 169450 170616 . + . ID=gene-CCO35_RS14785;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=CCO35_RS14785;old_locus_tag=CCO35_14775 NZ_NPME01000004.1 Protein Homology CDS 169450 170616 . + 0 ID=cds-WP_000704835.1;Parent=gene-CCO35_RS14785;Dbxref=GenBank:WP_000704835.1;Name=WP_000704835.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=CCO35_RS14785;product=UDP-glucose 6-dehydrogenase;protein_id=WP_000704835.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 170759 171742 . + . ID=gene-CCO35_RS14790;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=CCO35_RS14790;old_locus_tag=CCO35_14780 NZ_NPME01000004.1 Protein Homology CDS 170759 171742 . + 0 ID=cds-WP_000215247.1;Parent=gene-CCO35_RS14790;Dbxref=GenBank:WP_000215247.1;Name=WP_000215247.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=CCO35_RS14790;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_000215247.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 171837 172448 . - . ID=gene-CCO35_RS14795;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CCO35_RS14795;old_locus_tag=CCO35_14785 NZ_NPME01000004.1 Protein Homology CDS 171837 172448 . - 0 ID=cds-WP_000954847.1;Parent=gene-CCO35_RS14795;Dbxref=GenBank:WP_000954847.1;Name=WP_000954847.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=CCO35_RS14795;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954847.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 172442 173218 . - . ID=gene-CCO35_RS14800;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CCO35_RS14800;old_locus_tag=CCO35_14790 NZ_NPME01000004.1 Protein Homology CDS 172442 173218 . - 0 ID=cds-WP_000880125.1;Parent=gene-CCO35_RS14800;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=CCO35_RS14800;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 173200 173937 . - . ID=gene-CCO35_RS14805;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CCO35_RS14805;old_locus_tag=CCO35_14795 NZ_NPME01000004.1 Protein Homology CDS 173200 173937 . - 0 ID=cds-WP_000586406.1;Parent=gene-CCO35_RS14805;Dbxref=GenBank:WP_000586406.1;Name=WP_000586406.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=CCO35_RS14805;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586406.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 173937 174527 . - . ID=gene-CCO35_RS14810;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CCO35_RS14810;old_locus_tag=CCO35_14800 NZ_NPME01000004.1 Protein Homology CDS 173937 174527 . - 0 ID=cds-WP_001103591.1;Parent=gene-CCO35_RS14810;Dbxref=GenBank:WP_001103591.1;Name=WP_001103591.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=CCO35_RS14810;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103591.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 174527 175594 . - . ID=gene-CCO35_RS14815;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CCO35_RS14815;old_locus_tag=CCO35_14805 NZ_NPME01000004.1 Protein Homology CDS 174527 175594 . - 0 ID=cds-WP_000080044.1;Parent=gene-CCO35_RS14815;Dbxref=GenBank:WP_000080044.1;Name=WP_000080044.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=CCO35_RS14815;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080044.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 175591 176670 . - . ID=gene-CCO35_RS14820;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CCO35_RS14820;old_locus_tag=CCO35_14810 NZ_NPME01000004.1 Protein Homology CDS 175591 176670 . - 0 ID=cds-WP_000102715.1;Parent=gene-CCO35_RS14820;Dbxref=GenBank:WP_000102715.1;Name=WP_000102715.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=CCO35_RS14820;product=histidinol-phosphate transaminase;protein_id=WP_000102715.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 176667 177971 . - . ID=gene-CCO35_RS14825;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CCO35_RS14825;old_locus_tag=CCO35_14815 NZ_NPME01000004.1 Protein Homology CDS 176667 177971 . - 0 ID=cds-WP_023231084.1;Parent=gene-CCO35_RS14825;Dbxref=GenBank:WP_023231084.1;Name=WP_023231084.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=CCO35_RS14825;product=histidinol dehydrogenase;protein_id=WP_023231084.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 178074 178973 . - . ID=gene-CCO35_RS14830;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CCO35_RS14830;old_locus_tag=CCO35_14820 NZ_NPME01000004.1 Protein Homology CDS 178074 178973 . - 0 ID=cds-WP_000886600.1;Parent=gene-CCO35_RS14830;Dbxref=GenBank:WP_000886600.1;Name=WP_000886600.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=CCO35_RS14830;product=ATP phosphoribosyltransferase;protein_id=WP_000886600.1;transl_table=11 NZ_NPME01000004.1 cmsearch sequence_feature 179020 179143 . - . ID=id-NZ_NPME01000004.1:179020..179143;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPME01000004.1 RefSeq gene 179119 179169 . - . ID=gene-CCO35_RS14835;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=CCO35_RS14835;old_locus_tag=CCO35_14825 NZ_NPME01000004.1 Protein Homology CDS 179119 179169 . - 0 ID=cds-WP_001364200.1;Parent=gene-CCO35_RS14835;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=CCO35_RS14835;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 179332 180156 . + . ID=gene-CCO35_RS14840;Name=CCO35_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14840;old_locus_tag=CCO35_14830 NZ_NPME01000004.1 Protein Homology CDS 179332 180156 . + 0 ID=cds-WP_000754711.1;Parent=gene-CCO35_RS14840;Dbxref=GenBank:WP_000754711.1;Name=WP_000754711.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=CCO35_RS14840;product=SDR family oxidoreductase;protein_id=WP_000754711.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 180202 181116 . + . ID=gene-CCO35_RS14845;Name=CCO35_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14845;old_locus_tag=CCO35_14835 NZ_NPME01000004.1 Protein Homology CDS 180202 181116 . + 0 ID=cds-WP_000803316.1;Parent=gene-CCO35_RS14845;Dbxref=GenBank:WP_000803316.1;Name=WP_000803316.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=CCO35_RS14845;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 181350 181412 . + . ID=gene-CCO35_RS23685;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=CCO35_RS23685 NZ_NPME01000004.1 Protein Homology CDS 181350 181412 . + 0 ID=cds-WP_096335044.1;Parent=gene-CCO35_RS23685;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=CCO35_RS23685;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 181402 182760 . + . ID=gene-CCO35_RS14850;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=CCO35_RS14850;old_locus_tag=CCO35_14840 NZ_NPME01000004.1 Protein Homology CDS 181402 182760 . + 0 ID=cds-WP_001519005.1;Parent=gene-CCO35_RS14850;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=CCO35_RS14850;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 182896 184326 . - . ID=gene-CCO35_RS14855;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=CCO35_RS14855;old_locus_tag=CCO35_14845 NZ_NPME01000004.1 Protein Homology CDS 182896 184326 . - 0 ID=cds-WP_000216706.1;Parent=gene-CCO35_RS14855;Dbxref=GenBank:WP_000216706.1;Name=WP_000216706.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=CCO35_RS14855;product=exodeoxyribonuclease I;protein_id=WP_000216706.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 184462 184539 . + . ID=gene-CCO35_RS24090;Name=CCO35_RS24090;end_range=184539,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24090;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 184462 184539 . + 0 ID=cds-CCO35_RS24090;Parent=gene-CCO35_RS24090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=184539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=CCO35_RS24090;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq gene 184669 187017 . - . ID=gene-CCO35_RS14860;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=CCO35_RS14860;old_locus_tag=CCO35_14850 NZ_NPME01000004.1 Protein Homology CDS 184669 187017 . - 0 ID=cds-WP_000704009.1;Parent=gene-CCO35_RS14860;Dbxref=GenBank:WP_000704009.1;Name=WP_000704009.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=CCO35_RS14860;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_000704009.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 187285 187377 . + . ID=gene-CCO35_RS23830;Name=CCO35_RS23830;end_range=187377,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23830;partial=true;pseudo=true;start_range=.,187285 NZ_NPME01000004.1 Protein Homology CDS 187285 187377 . + 0 ID=cds-CCO35_RS23830;Parent=gene-CCO35_RS23830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=187377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO35_RS23830;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,187285;transl_table=11 NZ_NPME01000004.1 RefSeq gene 187637 189913 . + . ID=gene-CCO35_RS14875;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=CCO35_RS14875;old_locus_tag=CCO35_14865 NZ_NPME01000004.1 Protein Homology CDS 187637 189913 . + 0 ID=cds-WP_094965359.1;Parent=gene-CCO35_RS14875;Dbxref=GenBank:WP_094965359.1;Name=WP_094965359.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=CCO35_RS14875;product=thiosulfate reductase PhsA;protein_id=WP_094965359.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 189928 190506 . + . ID=gene-CCO35_RS14880;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=CCO35_RS14880;old_locus_tag=CCO35_14870 NZ_NPME01000004.1 Protein Homology CDS 189928 190506 . + 0 ID=cds-WP_001016236.1;Parent=gene-CCO35_RS14880;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=CCO35_RS14880;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 190503 191267 . + . ID=gene-CCO35_RS14885;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=CCO35_RS14885;old_locus_tag=CCO35_14875 NZ_NPME01000004.1 Protein Homology CDS 190503 191267 . + 0 ID=cds-WP_001092558.1;Parent=gene-CCO35_RS14885;Dbxref=GenBank:WP_001092558.1;Name=WP_001092558.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=CCO35_RS14885;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092558.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 191391 192563 . + . ID=gene-CCO35_RS14890;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=CCO35_RS14890;old_locus_tag=CCO35_14880 NZ_NPME01000004.1 Protein Homology CDS 191391 192563 . + 0 ID=cds-WP_031567864.1;Parent=gene-CCO35_RS14890;Dbxref=GenBank:WP_031567864.1;Name=WP_031567864.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=CCO35_RS14890;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_031567864.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 192714 193181 . + . ID=gene-CCO35_RS14895;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=CCO35_RS14895;old_locus_tag=CCO35_14885 NZ_NPME01000004.1 Protein Homology CDS 192714 193181 . + 0 ID=cds-WP_000384326.1;Parent=gene-CCO35_RS14895;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=CCO35_RS14895;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 193300 194358 . + . ID=gene-CCO35_RS14900;Name=CCO35_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14900;old_locus_tag=CCO35_14890 NZ_NPME01000004.1 Protein Homology CDS 193300 194358 . + 0 ID=cds-WP_001200860.1;Parent=gene-CCO35_RS14900;Dbxref=GenBank:WP_001200860.1;Name=WP_001200860.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=CCO35_RS14900;product=FUSC family protein;protein_id=WP_001200860.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 194603 194938 . + . ID=gene-CCO35_RS14905;Name=CCO35_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14905;old_locus_tag=CCO35_14895 NZ_NPME01000004.1 Protein Homology CDS 194603 194938 . + 0 ID=cds-WP_000450405.1;Parent=gene-CCO35_RS14905;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=CCO35_RS14905;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 194972 195838 . - . ID=gene-CCO35_RS14910;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=CCO35_RS14910;old_locus_tag=CCO35_14900 NZ_NPME01000004.1 Protein Homology CDS 194972 195838 . - 0 ID=cds-WP_001518728.1;Parent=gene-CCO35_RS14910;Dbxref=GenBank:WP_001518728.1;Name=WP_001518728.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=CCO35_RS14910;product=L-threonine kinase PduX;protein_id=WP_001518728.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 195932 197146 . - . ID=gene-CCO35_RS14915;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=CCO35_RS14915;old_locus_tag=CCO35_14905 NZ_NPME01000004.1 Protein Homology CDS 195932 197146 . - 0 ID=cds-WP_000120646.1;Parent=gene-CCO35_RS14915;Dbxref=GenBank:WP_000120646.1;Name=WP_000120646.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=CCO35_RS14915;product=propanediol utilization propionate kinase PduW;protein_id=WP_000120646.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 197131 197583 . - . ID=gene-CCO35_RS14920;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=CCO35_RS14920;old_locus_tag=CCO35_14910 NZ_NPME01000004.1 Protein Homology CDS 197131 197583 . - 0 ID=cds-WP_094965360.1;Parent=gene-CCO35_RS14920;Dbxref=GenBank:WP_094965360.1;Name=WP_094965360.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=CCO35_RS14920;product=propanediol utilization protein PduV;protein_id=WP_094965360.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 197588 197938 . - . ID=gene-CCO35_RS14925;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=CCO35_RS14925;old_locus_tag=CCO35_14915 NZ_NPME01000004.1 Protein Homology CDS 197588 197938 . - 0 ID=cds-WP_000441100.1;Parent=gene-CCO35_RS14925;Dbxref=GenBank:WP_000441100.1;Name=WP_000441100.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=CCO35_RS14925;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441100.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 197938 198492 . - . ID=gene-CCO35_RS14930;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=CCO35_RS14930;old_locus_tag=CCO35_14920 NZ_NPME01000004.1 Protein Homology CDS 197938 198492 . - 0 ID=cds-WP_000075777.1;Parent=gene-CCO35_RS14930;Dbxref=GenBank:WP_000075777.1;Name=WP_000075777.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=CCO35_RS14930;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075777.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 198495 199850 . - . ID=gene-CCO35_RS14935;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=CCO35_RS14935;old_locus_tag=CCO35_14925 NZ_NPME01000004.1 Protein Homology CDS 198495 199850 . - 0 ID=cds-WP_031567869.1;Parent=gene-CCO35_RS14935;Dbxref=GenBank:WP_031567869.1;Name=WP_031567869.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=CCO35_RS14935;product=cobalamin reductase PduS;protein_id=WP_031567869.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 199847 200959 . - . ID=gene-CCO35_RS14940;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=CCO35_RS14940;old_locus_tag=CCO35_14930 NZ_NPME01000004.1 Protein Homology CDS 199847 200959 . - 0 ID=cds-WP_001091446.1;Parent=gene-CCO35_RS14940;Dbxref=GenBank:WP_001091446.1;Name=WP_001091446.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=CCO35_RS14940;product=1-propanol dehydrogenase PduQ;protein_id=WP_001091446.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 200971 202365 . - . ID=gene-CCO35_RS14945;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=CCO35_RS14945;old_locus_tag=CCO35_14935 NZ_NPME01000004.1 Protein Homology CDS 200971 202365 . - 0 ID=cds-WP_001097662.1;Parent=gene-CCO35_RS14945;Dbxref=GenBank:WP_001097662.1;Name=WP_001097662.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=CCO35_RS14945;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_001097662.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 202362 203372 . - . ID=gene-CCO35_RS14950;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=CCO35_RS14950;old_locus_tag=CCO35_14940 NZ_NPME01000004.1 Protein Homology CDS 202362 203372 . - 0 ID=cds-WP_031567874.1;Parent=gene-CCO35_RS14950;Dbxref=GenBank:WP_031567874.1;Name=WP_031567874.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=CCO35_RS14950;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_031567874.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 203382 203657 . - . ID=gene-CCO35_RS14955;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=CCO35_RS14955;old_locus_tag=CCO35_14945 NZ_NPME01000004.1 Protein Homology CDS 203382 203657 . - 0 ID=cds-WP_000549825.1;Parent=gene-CCO35_RS14955;Dbxref=GenBank:WP_000549825.1;Name=WP_000549825.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=CCO35_RS14955;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549825.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 203661 204152 . - . ID=gene-CCO35_RS14960;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=CCO35_RS14960;old_locus_tag=CCO35_14950 NZ_NPME01000004.1 Protein Homology CDS 203661 204152 . - 0 ID=cds-WP_023137997.1;Parent=gene-CCO35_RS14960;Dbxref=GenBank:WP_023137997.1;Name=WP_023137997.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=CCO35_RS14960;product=propanediol utilization microcompartment protein PduM;protein_id=WP_023137997.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 204149 204781 . - . ID=gene-CCO35_RS14965;Name=CCO35_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS14965;old_locus_tag=CCO35_14955 NZ_NPME01000004.1 Protein Homology CDS 204149 204781 . - 0 ID=cds-WP_000356727.1;Parent=gene-CCO35_RS14965;Dbxref=GenBank:WP_000356727.1;Name=WP_000356727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=CCO35_RS14965;product=phosphate propanoyltransferase;protein_id=WP_000356727.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 204781 205263 . - . ID=gene-CCO35_RS14970;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=CCO35_RS14970;old_locus_tag=CCO35_14960 NZ_NPME01000004.1 Protein Homology CDS 204781 205263 . - 0 ID=cds-WP_001284380.1;Parent=gene-CCO35_RS14970;Dbxref=GenBank:WP_001284380.1;Name=WP_001284380.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=CCO35_RS14970;product=propanediol utilization microcompartment protein PduK;protein_id=WP_001284380.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 205267 205542 . - . ID=gene-CCO35_RS14975;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=CCO35_RS14975;old_locus_tag=CCO35_14965 NZ_NPME01000004.1 Protein Homology CDS 205267 205542 . - 0 ID=cds-WP_001057755.1;Parent=gene-CCO35_RS14975;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=CCO35_RS14975;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 205562 205912 . - . ID=gene-CCO35_RS14980;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=CCO35_RS14980;old_locus_tag=CCO35_14970 NZ_NPME01000004.1 Protein Homology CDS 205562 205912 . - 0 ID=cds-WP_031567882.1;Parent=gene-CCO35_RS14980;Dbxref=GenBank:WP_031567882.1;Name=WP_031567882.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=CCO35_RS14980;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_031567882.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 205902 207734 . - . ID=gene-CCO35_RS14985;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=CCO35_RS14985;old_locus_tag=CCO35_14975 NZ_NPME01000004.1 Protein Homology CDS 205902 207734 . - 0 ID=cds-WP_001268899.1;Parent=gene-CCO35_RS14985;Dbxref=GenBank:WP_001268899.1;Name=WP_001268899.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=CCO35_RS14985;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_001268899.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 207750 208271 . - . ID=gene-CCO35_RS14990;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=CCO35_RS14990;old_locus_tag=CCO35_14980 NZ_NPME01000004.1 Protein Homology CDS 207750 208271 . - 0 ID=cds-WP_001090597.1;Parent=gene-CCO35_RS14990;Dbxref=GenBank:WP_001090597.1;Name=WP_001090597.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=CCO35_RS14990;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090597.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 208286 208960 . - . ID=gene-CCO35_RS14995;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=CCO35_RS14995;old_locus_tag=CCO35_14985 NZ_NPME01000004.1 Protein Homology CDS 208286 208960 . - 0 ID=cds-WP_000405049.1;Parent=gene-CCO35_RS14995;Dbxref=GenBank:WP_000405049.1;Name=WP_000405049.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=CCO35_RS14995;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405049.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 208971 210635 . - . ID=gene-CCO35_RS15000;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=CCO35_RS15000;old_locus_tag=CCO35_14990 NZ_NPME01000004.1 Protein Homology CDS 208971 210635 . - 0 ID=cds-WP_001256896.1;Parent=gene-CCO35_RS15000;Dbxref=GenBank:WP_001256896.1;Name=WP_001256896.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=CCO35_RS15000;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256896.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 210654 211466 . - . ID=gene-CCO35_RS15005;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=CCO35_RS15005;old_locus_tag=CCO35_14995 NZ_NPME01000004.1 Protein Homology CDS 210654 211466 . - 0 ID=cds-WP_000097500.1;Parent=gene-CCO35_RS15005;Dbxref=GenBank:WP_000097500.1;Name=WP_000097500.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=CCO35_RS15005;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097500.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 211463 211747 . - . ID=gene-CCO35_RS15010;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=CCO35_RS15010;old_locus_tag=CCO35_15000 NZ_NPME01000004.1 Protein Homology CDS 211463 211747 . - 0 ID=cds-WP_001183618.1;Parent=gene-CCO35_RS15010;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=CCO35_RS15010;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 212272 213066 . + . ID=gene-CCO35_RS15015;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=CCO35_RS15015;old_locus_tag=CCO35_15005 NZ_NPME01000004.1 Protein Homology CDS 212272 213066 . + 0 ID=cds-WP_001000023.1;Parent=gene-CCO35_RS15015;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=CCO35_RS15015;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 213283 214194 . + . ID=gene-CCO35_RS15020;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=CCO35_RS15020;old_locus_tag=CCO35_15010 NZ_NPME01000004.1 Protein Homology CDS 213283 214194 . + 0 ID=cds-WP_000622323.1;Parent=gene-CCO35_RS15020;Dbxref=GenBank:WP_000622323.1;Name=WP_000622323.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=CCO35_RS15020;product=transcriptional regulator PocR;protein_id=WP_000622323.1;transl_table=11 NZ_NPME01000004.1 cmsearch riboswitch 214520 214694 . + . ID=id-NZ_NPME01000004.1:214520..214694;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPME01000004.1 RefSeq gene 214792 216171 . + . ID=gene-CCO35_RS15025;Name=CCO35_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15025;old_locus_tag=CCO35_15015 NZ_NPME01000004.1 Protein Homology CDS 214792 216171 . + 0 ID=cds-WP_031567888.1;Parent=gene-CCO35_RS15025;Dbxref=GenBank:WP_031567888.1;Name=WP_031567888.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=CCO35_RS15025;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_031567888.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 216168 217127 . + . ID=gene-CCO35_RS15030;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=CCO35_RS15030;old_locus_tag=CCO35_15020 NZ_NPME01000004.1 Protein Homology CDS 216168 217127 . + 0 ID=cds-WP_000153655.1;Parent=gene-CCO35_RS15030;Dbxref=GenBank:WP_000153655.1;Name=WP_000153655.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=CCO35_RS15030;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153655.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 217138 217770 . + . ID=gene-CCO35_RS15035;Name=CCO35_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15035;old_locus_tag=CCO35_15025 NZ_NPME01000004.1 Protein Homology CDS 217138 217770 . + 0 ID=cds-WP_000558993.1;Parent=gene-CCO35_RS15035;Dbxref=GenBank:WP_000558993.1;Name=WP_000558993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=CCO35_RS15035;product=cobalt-precorrin-8 methylmutase;protein_id=WP_000558993.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 217770 218909 . + . ID=gene-CCO35_RS15040;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=CCO35_RS15040;old_locus_tag=CCO35_15030 NZ_NPME01000004.1 Protein Homology CDS 217770 218909 . + 0 ID=cds-WP_001292904.1;Parent=gene-CCO35_RS15040;Dbxref=GenBank:WP_001292904.1;Name=WP_001292904.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=CCO35_RS15040;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_001292904.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 218903 219508 . + . ID=gene-CCO35_RS15045;Name=CCO35_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15045;old_locus_tag=CCO35_15035 NZ_NPME01000004.1 Protein Homology CDS 218903 219508 . + 0 ID=cds-WP_000958838.1;Parent=gene-CCO35_RS15045;Dbxref=GenBank:WP_000958838.1;Name=WP_000958838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=CCO35_RS15045;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958838.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 219498 220076 . + . ID=gene-CCO35_RS15050;Name=CCO35_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15050;old_locus_tag=CCO35_15040 NZ_NPME01000004.1 Protein Homology CDS 219498 220076 . + 0 ID=cds-WP_000650985.1;Parent=gene-CCO35_RS15050;Dbxref=GenBank:WP_000650985.1;Name=WP_000650985.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=CCO35_RS15050;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000650985.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 220060 220833 . + . ID=gene-CCO35_RS15055;Name=CCO35_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15055;old_locus_tag=CCO35_15045 NZ_NPME01000004.1 Protein Homology CDS 220060 220833 . + 0 ID=cds-WP_031567892.1;Parent=gene-CCO35_RS15055;Dbxref=GenBank:WP_031567892.1;Name=WP_031567892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=CCO35_RS15055;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_031567892.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 220814 221869 . + . ID=gene-CCO35_RS15060;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=CCO35_RS15060;old_locus_tag=CCO35_15050 NZ_NPME01000004.1 Protein Homology CDS 220814 221869 . + 0 ID=cds-WP_031567894.1;Parent=gene-CCO35_RS15060;Dbxref=GenBank:WP_031567894.1;Name=WP_031567894.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=CCO35_RS15060;product=cobalt-precorrin 5A hydrolase;protein_id=WP_031567894.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 221869 222594 . + . ID=gene-CCO35_RS15065;Name=CCO35_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15065;old_locus_tag=CCO35_15055 NZ_NPME01000004.1 Protein Homology CDS 221869 222594 . + 0 ID=cds-WP_000953642.1;Parent=gene-CCO35_RS15065;Dbxref=GenBank:WP_000953642.1;Name=WP_000953642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=CCO35_RS15065;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953642.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 222591 223382 . + . ID=gene-CCO35_RS15070;Name=CCO35_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15070;old_locus_tag=CCO35_15060 NZ_NPME01000004.1 Protein Homology CDS 222591 223382 . + 0 ID=cds-WP_001001974.1;Parent=gene-CCO35_RS15070;Dbxref=GenBank:WP_001001974.1;Name=WP_001001974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=CCO35_RS15070;product=cobalt-precorrin-6A reductase;protein_id=WP_001001974.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 223385 224179 . + . ID=gene-CCO35_RS15075;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=CCO35_RS15075;old_locus_tag=CCO35_15065 NZ_NPME01000004.1 Protein Homology CDS 223385 224179 . + 0 ID=cds-WP_031567897.1;Parent=gene-CCO35_RS15075;Dbxref=GenBank:WP_031567897.1;Name=WP_031567897.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=CCO35_RS15075;product=sirohydrochlorin cobaltochelatase;protein_id=WP_031567897.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 224176 224889 . + . ID=gene-CCO35_RS15080;Name=CCO35_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15080;old_locus_tag=CCO35_15070 NZ_NPME01000004.1 Protein Homology CDS 224176 224889 . + 0 ID=cds-WP_001013552.1;Parent=gene-CCO35_RS15080;Dbxref=GenBank:WP_001013552.1;Name=WP_001013552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=CCO35_RS15080;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013552.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 224886 225623 . + . ID=gene-CCO35_RS15085;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=CCO35_RS15085;old_locus_tag=CCO35_15075 NZ_NPME01000004.1 Protein Homology CDS 224886 225623 . + 0 ID=cds-WP_000764336.1;Parent=gene-CCO35_RS15085;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=CCO35_RS15085;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 225625 225906 . + . ID=gene-CCO35_RS15090;Name=CCO35_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15090;old_locus_tag=CCO35_15080 NZ_NPME01000004.1 Protein Homology CDS 225625 225906 . + 0 ID=cds-WP_000753212.1;Parent=gene-CCO35_RS15090;Dbxref=GenBank:WP_000753212.1;Name=WP_000753212.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=CCO35_RS15090;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753212.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 225893 226570 . + . ID=gene-CCO35_RS15095;Name=CCO35_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15095;old_locus_tag=CCO35_15085 NZ_NPME01000004.1 Protein Homology CDS 225893 226570 . + 0 ID=cds-WP_000147126.1;Parent=gene-CCO35_RS15095;Dbxref=GenBank:WP_000147126.1;Name=WP_000147126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=CCO35_RS15095;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_000147126.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 226579 227394 . + . ID=gene-CCO35_RS15100;Name=CCO35_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15100;old_locus_tag=CCO35_15090 NZ_NPME01000004.1 Protein Homology CDS 226579 227394 . + 0 ID=cds-WP_031567903.1;Parent=gene-CCO35_RS15100;Dbxref=GenBank:WP_031567903.1;Name=WP_031567903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=CCO35_RS15100;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_031567903.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 227391 228911 . + . ID=gene-CCO35_RS15105;Name=CCO35_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15105;old_locus_tag=CCO35_15095 NZ_NPME01000004.1 Protein Homology CDS 227391 228911 . + 0 ID=cds-WP_000189652.1;Parent=gene-CCO35_RS15105;Dbxref=GenBank:WP_000189652.1;Name=WP_000189652.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=CCO35_RS15105;product=cobyric acid synthase;protein_id=WP_000189652.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 228908 229453 . + . ID=gene-CCO35_RS15110;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=CCO35_RS15110;old_locus_tag=CCO35_15100 NZ_NPME01000004.1 Protein Homology CDS 228908 229453 . + 0 ID=cds-WP_000973189.1;Parent=gene-CCO35_RS15110;Dbxref=GenBank:WP_000973189.1;Name=WP_000973189.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=CCO35_RS15110;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973189.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 229450 230193 . + . ID=gene-CCO35_RS15115;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=CCO35_RS15115;old_locus_tag=CCO35_15105 NZ_NPME01000004.1 Protein Homology CDS 229450 230193 . + 0 ID=cds-WP_023136914.1;Parent=gene-CCO35_RS15115;Dbxref=GenBank:WP_023136914.1;Name=WP_023136914.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=CCO35_RS15115;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_023136914.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 230220 231290 . + . ID=gene-CCO35_RS15120;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=CCO35_RS15120;old_locus_tag=CCO35_15110 NZ_NPME01000004.1 Protein Homology CDS 230220 231290 . + 0 ID=cds-WP_001193969.1;Parent=gene-CCO35_RS15120;Dbxref=GenBank:WP_001193969.1;Name=WP_001193969.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=CCO35_RS15120;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193969.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 231368 232297 . + . ID=gene-CCO35_RS15125;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=CCO35_RS15125;old_locus_tag=CCO35_15115 NZ_NPME01000004.1 Protein Homology CDS 231368 232297 . + 0 ID=cds-WP_001255049.1;Parent=gene-CCO35_RS15125;Dbxref=GenBank:WP_001255049.1;Name=WP_001255049.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=CCO35_RS15125;product=L%2CD-transpeptidase;protein_id=WP_001255049.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 232523 232598 . - . ID=gene-CCO35_RS15130;Name=CCO35_RS15130;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS15130;old_locus_tag=CCO35_15120 NZ_NPME01000004.1 tRNAscan-SE tRNA 232523 232598 . - . ID=rna-CCO35_RS15130;Parent=gene-CCO35_RS15130;anticodon=(pos:complement(232563..232565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15130;product=tRNA-Asn NZ_NPME01000004.1 tRNAscan-SE exon 232523 232598 . - . ID=exon-CCO35_RS15130-1;Parent=rna-CCO35_RS15130;anticodon=(pos:complement(232563..232565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15130;product=tRNA-Asn NZ_NPME01000004.1 RefSeq gene 232758 234215 . + . ID=gene-CCO35_RS15135;Name=CCO35_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15135;old_locus_tag=CCO35_15125 NZ_NPME01000004.1 Protein Homology CDS 232758 234215 . + 0 ID=cds-WP_023137323.1;Parent=gene-CCO35_RS15135;Dbxref=GenBank:WP_023137323.1;Name=WP_023137323.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=CCO35_RS15135;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_023137323.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 234356 234431 . + . ID=gene-CCO35_RS15140;Name=CCO35_RS15140;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS15140;old_locus_tag=CCO35_15130 NZ_NPME01000004.1 tRNAscan-SE tRNA 234356 234431 . + . ID=rna-CCO35_RS15140;Parent=gene-CCO35_RS15140;anticodon=(pos:234389..234391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15140;product=tRNA-Asn NZ_NPME01000004.1 tRNAscan-SE exon 234356 234431 . + . ID=exon-CCO35_RS15140-1;Parent=rna-CCO35_RS15140;anticodon=(pos:234389..234391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15140;product=tRNA-Asn NZ_NPME01000004.1 RefSeq pseudogene 234853 235318 . + . ID=gene-CCO35_RS15150;Name=CCO35_RS15150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15150;old_locus_tag=CCO35_15140;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 234853 235318 . + 0 ID=cds-CCO35_RS15150;Parent=gene-CCO35_RS15150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=CCO35_RS15150;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq gene 235312 235638 . + . ID=gene-CCO35_RS15155;Name=CCO35_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15155;old_locus_tag=CCO35_15145 NZ_NPME01000004.1 Protein Homology CDS 235312 235638 . + 0 ID=cds-WP_000228163.1;Parent=gene-CCO35_RS15155;Dbxref=GenBank:WP_000228163.1;Name=WP_000228163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=CCO35_RS15155;product=DUF1493 family protein;protein_id=WP_000228163.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 235627 235788 . - . ID=gene-CCO35_RS15160;Name=CCO35_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15160;old_locus_tag=CCO35_15150 NZ_NPME01000004.1 Protein Homology CDS 235627 235788 . - 0 ID=cds-WP_001531298.1;Parent=gene-CCO35_RS15160;Dbxref=GenBank:WP_001531298.1;Name=WP_001531298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=CCO35_RS15160;product=hypothetical protein;protein_id=WP_001531298.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 235834 237288 . + . ID=gene-CCO35_RS15165;Name=CCO35_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15165;old_locus_tag=CCO35_15155 NZ_NPME01000004.1 Protein Homology CDS 235834 237288 . + 0 ID=cds-WP_000428191.1;Parent=gene-CCO35_RS15165;Dbxref=GenBank:WP_000428191.1;Name=WP_000428191.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=CCO35_RS15165;product=AMP nucleosidase;protein_id=WP_000428191.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 237790 237865 . - . ID=gene-CCO35_RS15175;Name=CCO35_RS15175;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS15175;old_locus_tag=CCO35_15165 NZ_NPME01000004.1 tRNAscan-SE tRNA 237790 237865 . - . ID=rna-CCO35_RS15175;Parent=gene-CCO35_RS15175;anticodon=(pos:complement(237830..237832));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15175;product=tRNA-Asn NZ_NPME01000004.1 tRNAscan-SE exon 237790 237865 . - . ID=exon-CCO35_RS15175-1;Parent=rna-CCO35_RS15175;anticodon=(pos:complement(237830..237832));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15175;product=tRNA-Asn NZ_NPME01000004.1 RefSeq pseudogene 238034 238298 . - . ID=gene-CCO35_RS24095;Name=CCO35_RS24095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24095;old_locus_tag=CCO35_15170;partial=true;pseudo=true;start_range=.,238034 NZ_NPME01000004.1 Protein Homology CDS 238034 238298 . - 0 ID=cds-CCO35_RS24095;Parent=gene-CCO35_RS24095;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743378.1;locus_tag=CCO35_RS24095;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,238034;transl_table=11 NZ_NPME01000004.1 RefSeq gene 238466 238541 . - . ID=gene-CCO35_RS15185;Name=CCO35_RS15185;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS15185;old_locus_tag=CCO35_15175 NZ_NPME01000004.1 tRNAscan-SE tRNA 238466 238541 . - . ID=rna-CCO35_RS15185;Parent=gene-CCO35_RS15185;anticodon=(pos:complement(238506..238508));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15185;product=tRNA-Asn NZ_NPME01000004.1 tRNAscan-SE exon 238466 238541 . - . ID=exon-CCO35_RS15185-1;Parent=rna-CCO35_RS15185;anticodon=(pos:complement(238506..238508));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15185;product=tRNA-Asn NZ_NPME01000004.1 RefSeq gene 238642 239439 . - . ID=gene-CCO35_RS15190;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=CCO35_RS15190;old_locus_tag=CCO35_15180 NZ_NPME01000004.1 Protein Homology CDS 238642 239439 . - 0 ID=cds-WP_000598926.1;Parent=gene-CCO35_RS15190;Dbxref=GenBank:WP_000598926.1;Name=WP_000598926.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=CCO35_RS15190;product=DgsA anti-repressor MtfA;protein_id=WP_000598926.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 239528 239617 . + . ID=gene-CCO35_RS15195;Name=CCO35_RS15195;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS15195;old_locus_tag=CCO35_15185 NZ_NPME01000004.1 tRNAscan-SE tRNA 239528 239617 . + . ID=rna-CCO35_RS15195;Parent=gene-CCO35_RS15195;anticodon=(pos:239562..239564);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15195;product=tRNA-Ser NZ_NPME01000004.1 tRNAscan-SE exon 239528 239617 . + . ID=exon-CCO35_RS15195-1;Parent=rna-CCO35_RS15195;anticodon=(pos:239562..239564);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15195;product=tRNA-Ser NZ_NPME01000004.1 RefSeq gene 240209 240628 . + . ID=gene-CCO35_RS15210;Name=CCO35_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15210;old_locus_tag=CCO35_15200 NZ_NPME01000004.1 Protein Homology CDS 240209 240628 . + 0 ID=cds-WP_000394197.1;Parent=gene-CCO35_RS15210;Dbxref=GenBank:WP_000394197.1;Name=WP_000394197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=CCO35_RS15210;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000394197.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 240631 241899 . + . ID=gene-CCO35_RS15215;Name=CCO35_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15215;old_locus_tag=CCO35_15205 NZ_NPME01000004.1 Protein Homology CDS 240631 241899 . + 0 ID=cds-WP_023212516.1;Parent=gene-CCO35_RS15215;Dbxref=GenBank:WP_023212516.1;Name=WP_023212516.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO35_RS15215;product=Y-family DNA polymerase;protein_id=WP_023212516.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 242354 242566 . + . ID=gene-CCO35_RS15220;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO35_RS15220;old_locus_tag=CCO35_15210 NZ_NPME01000004.1 Protein Homology CDS 242354 242566 . + 0 ID=cds-WP_000208509.1;Parent=gene-CCO35_RS15220;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=CCO35_RS15220;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 242577 242765 . + . ID=gene-CCO35_RS15225;Name=CCO35_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15225;old_locus_tag=CCO35_15215 NZ_NPME01000004.1 Protein Homology CDS 242577 242765 . + 0 ID=cds-WP_024131109.1;Parent=gene-CCO35_RS15225;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=CCO35_RS15225;product=hypothetical protein;protein_id=WP_024131109.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 243024 244202 . - . ID=gene-CCO35_RS15230;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=CCO35_RS15230;old_locus_tag=CCO35_15220 NZ_NPME01000004.1 Protein Homology CDS 243024 244202 . - 0 ID=cds-WP_031567923.1;Parent=gene-CCO35_RS15230;Dbxref=GenBank:WP_031567923.1;Name=WP_031567923.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=CCO35_RS15230;product=porin OmpS1;protein_id=WP_031567923.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 244852 245163 . + . ID=gene-CCO35_RS15235;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=CCO35_RS15235;old_locus_tag=CCO35_15225 NZ_NPME01000004.1 Protein Homology CDS 244852 245163 . + 0 ID=cds-WP_000107440.1;Parent=gene-CCO35_RS15235;Dbxref=GenBank:WP_000107440.1;Name=WP_000107440.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=CCO35_RS15235;product=cell division protein DrpB;protein_id=WP_000107440.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 245243 245938 . + . ID=gene-CCO35_RS15240;Name=CCO35_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15240;old_locus_tag=CCO35_15230 NZ_NPME01000004.1 Protein Homology CDS 245243 245938 . + 0 ID=cds-WP_000377042.1;Parent=gene-CCO35_RS15240;Dbxref=GenBank:WP_000377042.1;Name=WP_000377042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=CCO35_RS15240;product=phosphohydrolase;protein_id=WP_000377042.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 246012 247442 . + . ID=gene-CCO35_RS15245;Name=CCO35_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15245;old_locus_tag=CCO35_15235 NZ_NPME01000004.1 Protein Homology CDS 246012 247442 . + 0 ID=cds-WP_001157316.1;Parent=gene-CCO35_RS15245;Dbxref=GenBank:WP_001157316.1;Name=WP_001157316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=CCO35_RS15245;product=DNA cytosine methyltransferase;protein_id=WP_001157316.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 247423 247893 . + . ID=gene-CCO35_RS15250;Name=CCO35_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15250;old_locus_tag=CCO35_15240 NZ_NPME01000004.1 Protein Homology CDS 247423 247893 . + 0 ID=cds-WP_000785978.1;Parent=gene-CCO35_RS15250;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=CCO35_RS15250;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 247882 248802 . - . ID=gene-CCO35_RS15255;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=CCO35_RS15255;old_locus_tag=CCO35_15245 NZ_NPME01000004.1 Protein Homology CDS 247882 248802 . - 0 ID=cds-WP_001212264.1;Parent=gene-CCO35_RS15255;Dbxref=GenBank:WP_001212264.1;Name=WP_001212264.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=CCO35_RS15255;product=drug/metabolite exporter YedA;protein_id=WP_001212264.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 248972 249889 . + . ID=gene-CCO35_RS15260;Name=CCO35_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15260;old_locus_tag=CCO35_15250 NZ_NPME01000004.1 Protein Homology CDS 248972 249889 . + 0 ID=cds-WP_085920526.1;Parent=gene-CCO35_RS15260;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=CCO35_RS15260;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 249966 250151 . + . ID=gene-CCO35_RS15265;Name=CCO35_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15265;old_locus_tag=CCO35_15255 NZ_NPME01000004.1 Protein Homology CDS 249966 250151 . + 0 ID=cds-WP_000232161.1;Parent=gene-CCO35_RS15265;Dbxref=GenBank:WP_000232161.1;Name=WP_000232161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=CCO35_RS15265;product=YodC family protein;protein_id=WP_000232161.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 250316 252028 . + . ID=gene-CCO35_RS15270;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=CCO35_RS15270;old_locus_tag=CCO35_15260 NZ_NPME01000004.1 Protein Homology CDS 250316 252028 . + 0 ID=cds-WP_001119818.1;Parent=gene-CCO35_RS15270;Dbxref=GenBank:WP_001119818.1;Name=WP_001119818.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=CCO35_RS15270;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001119818.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 252007 252822 . - . ID=gene-CCO35_RS15275;Name=CCO35_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15275;old_locus_tag=CCO35_15265 NZ_NPME01000004.1 Protein Homology CDS 252007 252822 . - 0 ID=cds-WP_000948794.1;Parent=gene-CCO35_RS15275;Dbxref=GenBank:WP_000948794.1;Name=WP_000948794.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=CCO35_RS15275;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948794.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 253132 253359 . - . ID=gene-CCO35_RS15280;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=CCO35_RS15280;old_locus_tag=CCO35_15270 NZ_NPME01000004.1 Protein Homology CDS 253132 253359 . - 0 ID=cds-WP_000844798.1;Parent=gene-CCO35_RS15280;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=CCO35_RS15280;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 253488 253682 . + . ID=gene-CCO35_RS15285;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=CCO35_RS15285;old_locus_tag=CCO35_15275 NZ_NPME01000004.1 Protein Homology CDS 253488 253682 . + 0 ID=cds-WP_000867218.1;Parent=gene-CCO35_RS15285;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=CCO35_RS15285;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 253721 254344 . - . ID=gene-CCO35_RS15290;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=CCO35_RS15290;old_locus_tag=CCO35_15280 NZ_NPME01000004.1 Protein Homology CDS 253721 254344 . - 0 ID=cds-WP_000103971.1;Parent=gene-CCO35_RS15290;Dbxref=GenBank:WP_000103971.1;Name=WP_000103971.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=CCO35_RS15290;product=transcriptional regulator RcsA;protein_id=WP_000103971.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 254626 255420 . - . ID=gene-CCO35_RS15295;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=CCO35_RS15295;old_locus_tag=CCO35_15285 NZ_NPME01000004.1 Protein Homology CDS 254626 255420 . - 0 ID=cds-WP_000616953.1;Parent=gene-CCO35_RS15295;Dbxref=GenBank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=CCO35_RS15295;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 255429 255698 . - . ID=gene-CCO35_RS15300;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=CCO35_RS15300;old_locus_tag=CCO35_15290 NZ_NPME01000004.1 Protein Homology CDS 255429 255698 . - 0 ID=cds-WP_000187355.1;Parent=gene-CCO35_RS15300;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=CCO35_RS15300;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 255708 256445 . - . ID=gene-CCO35_RS15305;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=CCO35_RS15305;old_locus_tag=CCO35_15295 NZ_NPME01000004.1 Protein Homology CDS 255708 256445 . - 0 ID=cds-WP_001253411.1;Parent=gene-CCO35_RS15305;Dbxref=GenBank:WP_001253411.1;Name=WP_001253411.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=CCO35_RS15305;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253411.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 256445 256822 . - . ID=gene-CCO35_RS15310;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=CCO35_RS15310;old_locus_tag=CCO35_15300 NZ_NPME01000004.1 Protein Homology CDS 256445 256822 . - 0 ID=cds-WP_000978275.1;Parent=gene-CCO35_RS15310;Dbxref=GenBank:WP_000978275.1;Name=WP_000978275.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=CCO35_RS15310;product=flagellar biosynthetic protein FliO;protein_id=WP_000978275.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 256822 257235 . - . ID=gene-CCO35_RS15315;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=CCO35_RS15315;old_locus_tag=CCO35_15305 NZ_NPME01000004.1 Protein Homology CDS 256822 257235 . - 0 ID=cds-WP_001282111.1;Parent=gene-CCO35_RS15315;Dbxref=GenBank:WP_001282111.1;Name=WP_001282111.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=CCO35_RS15315;product=flagellar motor switch protein FliN;protein_id=WP_001282111.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 257232 258236 . - . ID=gene-CCO35_RS15320;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=CCO35_RS15320;old_locus_tag=CCO35_15310 NZ_NPME01000004.1 Protein Homology CDS 257232 258236 . - 0 ID=cds-WP_000502811.1;Parent=gene-CCO35_RS15320;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=CCO35_RS15320;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 258241 258708 . - . ID=gene-CCO35_RS15325;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=CCO35_RS15325;old_locus_tag=CCO35_15315 NZ_NPME01000004.1 Protein Homology CDS 258241 258708 . - 0 ID=cds-WP_000132169.1;Parent=gene-CCO35_RS15325;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=CCO35_RS15325;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 258813 260036 . - . ID=gene-CCO35_RS15330;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=CCO35_RS15330;old_locus_tag=CCO35_15320 NZ_NPME01000004.1 Protein Homology CDS 258813 260036 . - 0 ID=cds-WP_023217298.1;Parent=gene-CCO35_RS15330;Dbxref=GenBank:WP_023217298.1;Name=WP_023217298.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=CCO35_RS15330;product=flagellar hook length control protein FliK;protein_id=WP_023217298.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 260033 260476 . - . ID=gene-CCO35_RS15335;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=CCO35_RS15335;old_locus_tag=CCO35_15325 NZ_NPME01000004.1 Protein Homology CDS 260033 260476 . - 0 ID=cds-WP_000046981.1;Parent=gene-CCO35_RS15335;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=CCO35_RS15335;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 260498 261868 . - . ID=gene-CCO35_RS15340;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=CCO35_RS15340;old_locus_tag=CCO35_15330 NZ_NPME01000004.1 Protein Homology CDS 260498 261868 . - 0 ID=cds-WP_000213257.1;Parent=gene-CCO35_RS15340;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=CCO35_RS15340;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 261868 262575 . - . ID=gene-CCO35_RS15345;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=CCO35_RS15345;old_locus_tag=CCO35_15335 NZ_NPME01000004.1 Protein Homology CDS 261868 262575 . - 0 ID=cds-WP_000064164.1;Parent=gene-CCO35_RS15345;Dbxref=GenBank:WP_000064164.1;Name=WP_000064164.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=CCO35_RS15345;product=flagellar assembly protein FliH;protein_id=WP_000064164.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 262568 263563 . - . ID=gene-CCO35_RS15350;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=CCO35_RS15350;old_locus_tag=CCO35_15340 NZ_NPME01000004.1 Protein Homology CDS 262568 263563 . - 0 ID=cds-WP_000067735.1;Parent=gene-CCO35_RS15350;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=CCO35_RS15350;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 263556 265238 . - . ID=gene-CCO35_RS15355;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=CCO35_RS15355;old_locus_tag=CCO35_15345 NZ_NPME01000004.1 Protein Homology CDS 263556 265238 . - 0 ID=cds-WP_001276830.1;Parent=gene-CCO35_RS15355;Dbxref=GenBank:WP_001276830.1;Name=WP_001276830.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=CCO35_RS15355;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_001276830.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 265455 265769 . + . ID=gene-CCO35_RS15360;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=CCO35_RS15360;old_locus_tag=CCO35_15350 NZ_NPME01000004.1 Protein Homology CDS 265455 265769 . + 0 ID=cds-WP_000719039.1;Parent=gene-CCO35_RS15360;Dbxref=GenBank:WP_000719039.1;Name=WP_000719039.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=CCO35_RS15360;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719039.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 265891 266277 . - . ID=gene-CCO35_RS15365;Name=CCO35_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15365;old_locus_tag=CCO35_15355 NZ_NPME01000004.1 Protein Homology CDS 265891 266277 . - 0 ID=cds-WP_000639596.1;Parent=gene-CCO35_RS15365;Dbxref=GenBank:WP_000639596.1;Name=WP_000639596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=CCO35_RS15365;product=hypothetical protein;protein_id=WP_000639596.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 266542 266775 . - . ID=gene-CCO35_RS15370;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=CCO35_RS15370;old_locus_tag=CCO35_15360 NZ_NPME01000004.1 Protein Homology CDS 266542 266775 . - 0 ID=cds-WP_000790504.1;Parent=gene-CCO35_RS15370;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=CCO35_RS15370;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 266772 267977 . - . ID=gene-CCO35_RS15375;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=CCO35_RS15375;old_locus_tag=CCO35_15365 NZ_NPME01000004.1 Protein Homology CDS 266772 267977 . - 0 ID=cds-WP_023212509.1;Parent=gene-CCO35_RS15375;Dbxref=GenBank:WP_023212509.1;Name=WP_023212509.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=CCO35_RS15375;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_023212509.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 268163 268576 . + . ID=gene-CCO35_RS15380;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=CCO35_RS15380;old_locus_tag=CCO35_15370 NZ_NPME01000004.1 Protein Homology CDS 268163 268576 . + 0 ID=cds-WP_000754694.1;Parent=gene-CCO35_RS15380;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=CCO35_RS15380;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 268616 270100 . - . ID=gene-CCO35_RS15385;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=CCO35_RS15385;old_locus_tag=CCO35_15375 NZ_NPME01000004.1 Protein Homology CDS 268616 270100 . - 0 ID=cds-WP_023212508.1;Parent=gene-CCO35_RS15385;Dbxref=GenBank:WP_023212508.1;Name=WP_023212508.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=CCO35_RS15385;product=alpha-amylase;protein_id=WP_023212508.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 270172 270540 . - . ID=gene-CCO35_RS15390;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=CCO35_RS15390;old_locus_tag=CCO35_15380 NZ_NPME01000004.1 Protein Homology CDS 270172 270540 . - 0 ID=cds-WP_000204899.1;Parent=gene-CCO35_RS15390;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=CCO35_RS15390;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 270540 270947 . - . ID=gene-CCO35_RS15395;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=CCO35_RS15395;old_locus_tag=CCO35_15385 NZ_NPME01000004.1 Protein Homology CDS 270540 270947 . - 0 ID=cds-WP_000287764.1;Parent=gene-CCO35_RS15395;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=CCO35_RS15395;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 270962 272365 . - . ID=gene-CCO35_RS15400;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=CCO35_RS15400;old_locus_tag=CCO35_15390 NZ_NPME01000004.1 Protein Homology CDS 270962 272365 . - 0 ID=cds-WP_000146802.1;Parent=gene-CCO35_RS15400;Dbxref=GenBank:WP_000146802.1;Name=WP_000146802.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=CCO35_RS15400;product=flagellar filament capping protein FliD;protein_id=WP_000146802.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 272622 274124 . + . ID=gene-CCO35_RS15405;Name=CCO35_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15405;old_locus_tag=CCO35_15395 NZ_NPME01000004.1 Protein Homology CDS 272622 274124 . + 0 ID=cds-WP_023212507.1;Parent=gene-CCO35_RS15405;Dbxref=GenBank:WP_023212507.1;Name=WP_023212507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460912.1;locus_tag=CCO35_RS15405;product=FliC/FljB family flagellin;protein_id=WP_023212507.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 274203 275408 . + . ID=gene-CCO35_RS15410;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=CCO35_RS15410;old_locus_tag=CCO35_15400 NZ_NPME01000004.1 Protein Homology CDS 274203 275408 . + 0 ID=cds-WP_001633583.1;Parent=gene-CCO35_RS15410;Dbxref=GenBank:WP_001633583.1;Name=WP_001633583.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=CCO35_RS15410;product=flagellin lysine-N-methylase;protein_id=WP_001633583.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 275605 276324 . + . ID=gene-CCO35_RS15415;Name=CCO35_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15415;old_locus_tag=CCO35_15405 NZ_NPME01000004.1 Protein Homology CDS 275605 276324 . + 0 ID=cds-WP_001087453.1;Parent=gene-CCO35_RS15415;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=CCO35_RS15415;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 276383 276934 . + . ID=gene-CCO35_RS15420;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=CCO35_RS15420;old_locus_tag=CCO35_15410 NZ_NPME01000004.1 Protein Homology CDS 276383 276934 . + 0 ID=cds-WP_000218082.1;Parent=gene-CCO35_RS15420;Dbxref=GenBank:WP_000218082.1;Name=WP_000218082.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=CCO35_RS15420;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218082.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 277081 277881 . + . ID=gene-CCO35_RS15425;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=CCO35_RS15425;old_locus_tag=CCO35_15415 NZ_NPME01000004.1 Protein Homology CDS 277081 277881 . + 0 ID=cds-WP_000761634.1;Parent=gene-CCO35_RS15425;Dbxref=GenBank:WP_000761634.1;Name=WP_000761634.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=CCO35_RS15425;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761634.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 278035 279021 . + . ID=gene-CCO35_RS15430;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=CCO35_RS15430;old_locus_tag=CCO35_15420 NZ_NPME01000004.1 Protein Homology CDS 278035 279021 . + 0 ID=cds-WP_001128187.1;Parent=gene-CCO35_RS15430;Dbxref=GenBank:WP_001128187.1;Name=WP_001128187.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=CCO35_RS15430;product=D-cysteine desulfhydrase;protein_id=WP_001128187.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 279042 279710 . + . ID=gene-CCO35_RS15435;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=CCO35_RS15435;old_locus_tag=CCO35_15425 NZ_NPME01000004.1 Protein Homology CDS 279042 279710 . + 0 ID=cds-WP_001158238.1;Parent=gene-CCO35_RS15435;Dbxref=GenBank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=CCO35_RS15435;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 279707 280459 . + . ID=gene-CCO35_RS15440;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=CCO35_RS15440;old_locus_tag=CCO35_15430 NZ_NPME01000004.1 Protein Homology CDS 279707 280459 . + 0 ID=cds-WP_001273038.1;Parent=gene-CCO35_RS15440;Dbxref=GenBank:WP_001273038.1;Name=WP_001273038.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=CCO35_RS15440;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273038.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 280692 281414 . + . ID=gene-CCO35_RS15445;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=CCO35_RS15445;old_locus_tag=CCO35_15435 NZ_NPME01000004.1 Protein Homology CDS 280692 281414 . + 0 ID=cds-WP_001157169.1;Parent=gene-CCO35_RS15445;Dbxref=GenBank:WP_001157169.1;Name=WP_001157169.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=CCO35_RS15445;product=transcriptional regulator SdiA;protein_id=WP_001157169.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 281481 281705 . - . ID=gene-CCO35_RS15450;Name=CCO35_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15450;old_locus_tag=CCO35_15440 NZ_NPME01000004.1 Protein Homology CDS 281481 281705 . - 0 ID=cds-WP_000106483.1;Parent=gene-CCO35_RS15450;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=CCO35_RS15450;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 281702 281857 . - . ID=gene-CCO35_RS15455;Name=CCO35_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15455;old_locus_tag=CCO35_15445 NZ_NPME01000004.1 Protein Homology CDS 281702 281857 . - 0 ID=cds-WP_000546183.1;Parent=gene-CCO35_RS15455;Dbxref=GenBank:WP_000546183.1;Name=WP_000546183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=CCO35_RS15455;product=hypothetical protein;protein_id=WP_000546183.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 282169 282825 . + . ID=gene-CCO35_RS15460;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=CCO35_RS15460;old_locus_tag=CCO35_15450 NZ_NPME01000004.1 Protein Homology CDS 282169 282825 . + 0 ID=cds-WP_000611323.1;Parent=gene-CCO35_RS15460;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=CCO35_RS15460;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 282822 284654 . + . ID=gene-CCO35_RS15465;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CCO35_RS15465;old_locus_tag=CCO35_15455 NZ_NPME01000004.1 Protein Homology CDS 282822 284654 . + 0 ID=cds-WP_001289458.1;Parent=gene-CCO35_RS15465;Dbxref=GenBank:WP_001289458.1;Name=WP_001289458.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=CCO35_RS15465;product=excinuclease ABC subunit UvrC;protein_id=WP_001289458.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 284711 285259 . + . ID=gene-CCO35_RS15470;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CCO35_RS15470;old_locus_tag=CCO35_15460 NZ_NPME01000004.1 Protein Homology CDS 284711 285259 . + 0 ID=cds-WP_001160192.1;Parent=gene-CCO35_RS15470;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=CCO35_RS15470;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 285411 285486 . + . ID=gene-CCO35_RS15475;Name=CCO35_RS15475;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS15475;old_locus_tag=CCO35_15465 NZ_NPME01000004.1 tRNAscan-SE tRNA 285411 285486 . + . ID=rna-CCO35_RS15475;Parent=gene-CCO35_RS15475;anticodon=(pos:285444..285446);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15475;product=tRNA-Gly NZ_NPME01000004.1 tRNAscan-SE exon 285411 285486 . + . ID=exon-CCO35_RS15475-1;Parent=rna-CCO35_RS15475;anticodon=(pos:285444..285446);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15475;product=tRNA-Gly NZ_NPME01000004.1 RefSeq gene 285538 285611 . + . ID=gene-CCO35_RS15480;Name=CCO35_RS15480;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS15480;old_locus_tag=CCO35_15470 NZ_NPME01000004.1 tRNAscan-SE tRNA 285538 285611 . + . ID=rna-CCO35_RS15480;Parent=gene-CCO35_RS15480;anticodon=(pos:285570..285572);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15480;product=tRNA-Cys NZ_NPME01000004.1 tRNAscan-SE exon 285538 285611 . + . ID=exon-CCO35_RS15480-1;Parent=rna-CCO35_RS15480;anticodon=(pos:285570..285572);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15480;product=tRNA-Cys NZ_NPME01000004.1 RefSeq gene 285623 285709 . + . ID=gene-CCO35_RS15485;Name=CCO35_RS15485;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS15485;old_locus_tag=CCO35_15475 NZ_NPME01000004.1 tRNAscan-SE tRNA 285623 285709 . + . ID=rna-CCO35_RS15485;Parent=gene-CCO35_RS15485;anticodon=(pos:285657..285659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15485;product=tRNA-Leu NZ_NPME01000004.1 tRNAscan-SE exon 285623 285709 . + . ID=exon-CCO35_RS15485-1;Parent=rna-CCO35_RS15485;anticodon=(pos:285657..285659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS15485;product=tRNA-Leu NZ_NPME01000004.1 RefSeq pseudogene 285960 286291 . + . ID=gene-CCO35_RS15490;Name=CCO35_RS15490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15490;old_locus_tag=CCO35_15480;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 285960 286291 . + 0 ID=cds-CCO35_RS15490;Parent=gene-CCO35_RS15490;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=CCO35_RS15490;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq gene 286505 287944 . + . ID=gene-CCO35_RS15495;Name=CCO35_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15495;old_locus_tag=CCO35_15485 NZ_NPME01000004.1 Protein Homology CDS 286505 287944 . + 0 ID=cds-WP_077906027.1;Parent=gene-CCO35_RS15495;Dbxref=GenBank:WP_077906027.1;Name=WP_077906027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=CCO35_RS15495;product=SH3 domain-containing C40 family peptidase;protein_id=WP_077906027.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 288157 288483 . + . ID=gene-CCO35_RS15500;Name=CCO35_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15500;old_locus_tag=CCO35_15490 NZ_NPME01000004.1 Protein Homology CDS 288157 288483 . + 0 ID=cds-WP_000240837.1;Parent=gene-CCO35_RS15500;Dbxref=GenBank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=CCO35_RS15500;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 288722 289387 . + . ID=gene-CCO35_RS15505;Name=CCO35_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15505;old_locus_tag=CCO35_15495 NZ_NPME01000004.1 Protein Homology CDS 288722 289387 . + 0 ID=cds-WP_000781521.1;Parent=gene-CCO35_RS15505;Dbxref=GenBank:WP_000781521.1;Name=WP_000781521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=CCO35_RS15505;product=YecA family protein;protein_id=WP_000781521.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 289462 290673 . - . ID=gene-CCO35_RS15510;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=CCO35_RS15510;old_locus_tag=CCO35_15500 NZ_NPME01000004.1 Protein Homology CDS 289462 290673 . - 0 ID=cds-WP_023219655.1;Parent=gene-CCO35_RS15510;Dbxref=GenBank:WP_023219655.1;Name=WP_023219655.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=CCO35_RS15510;product=tyrosine transporter TyrP;protein_id=WP_023219655.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 290900 291139 . + . ID=gene-CCO35_RS15515;Name=CCO35_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15515;old_locus_tag=CCO35_15505 NZ_NPME01000004.1 Protein Homology CDS 290900 291139 . + 0 ID=cds-WP_000377238.1;Parent=gene-CCO35_RS15515;Dbxref=GenBank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=CCO35_RS15515;product=YecH family metal-binding protein;protein_id=WP_000377238.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 291185 291682 . - . ID=gene-CCO35_RS15520;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=CCO35_RS15520;old_locus_tag=CCO35_15510 NZ_NPME01000004.1 Protein Homology CDS 291185 291682 . - 0 ID=cds-WP_000920619.1;Parent=gene-CCO35_RS15520;Dbxref=GenBank:WP_000920619.1;Name=WP_000920619.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=CCO35_RS15520;product=non-heme ferritin;protein_id=WP_000920619.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 291922 292257 . - . ID=gene-CCO35_RS15525;Name=CCO35_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15525;old_locus_tag=CCO35_15515 NZ_NPME01000004.1 Protein Homology CDS 291922 292257 . - 0 ID=cds-WP_000803229.1;Parent=gene-CCO35_RS15525;Dbxref=GenBank:WP_000803229.1;Name=WP_000803229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=CCO35_RS15525;product=YecR-like lipofamily protein;protein_id=WP_000803229.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 292512 293150 . + . ID=gene-CCO35_RS15530;Name=CCO35_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15530;old_locus_tag=CCO35_15520 NZ_NPME01000004.1 Protein Homology CDS 292512 293150 . + 0 ID=cds-WP_000684804.1;Parent=gene-CCO35_RS15530;Dbxref=GenBank:WP_000684804.1;Name=WP_000684804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=CCO35_RS15530;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 293329 293832 . - . ID=gene-CCO35_RS15535;Name=CCO35_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15535;old_locus_tag=CCO35_15525 NZ_NPME01000004.1 Protein Homology CDS 293329 293832 . - 0 ID=cds-WP_000741707.1;Parent=gene-CCO35_RS15535;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=CCO35_RS15535;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 294390 294947 . + . ID=gene-CCO35_RS15540;Name=CCO35_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15540;old_locus_tag=CCO35_15530 NZ_NPME01000004.1 Protein Homology CDS 294390 294947 . + 0 ID=cds-WP_031567997.1;Parent=gene-CCO35_RS15540;Dbxref=GenBank:WP_031567997.1;Name=WP_031567997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=CCO35_RS15540;product=DJ-1/PfpI family protein;protein_id=WP_031567997.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 295176 295357 . + . ID=gene-CCO35_RS15545;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=CCO35_RS15545;old_locus_tag=CCO35_15535;partial=true;pseudo=true;start_range=.,295176 NZ_NPME01000004.1 Protein Homology CDS 295176 295357 . + 0 ID=cds-CCO35_RS15545;Parent=gene-CCO35_RS15545;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=CCO35_RS15545;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;start_range=.,295176;transl_table=11 NZ_NPME01000004.1 RefSeq gene 295580 296383 . + . ID=gene-CCO35_RS15550;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=CCO35_RS15550;old_locus_tag=CCO35_15540 NZ_NPME01000004.1 Protein Homology CDS 295580 296383 . + 0 ID=cds-WP_000840114.1;Parent=gene-CCO35_RS15550;Dbxref=GenBank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=CCO35_RS15550;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 296358 297779 . + . ID=gene-CCO35_RS15555;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=CCO35_RS15555;old_locus_tag=CCO35_15545 NZ_NPME01000004.1 Protein Homology CDS 296358 297779 . + 0 ID=cds-WP_000089046.1;Parent=gene-CCO35_RS15555;Dbxref=GenBank:WP_000089046.1;Name=WP_000089046.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=CCO35_RS15555;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089046.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 297797 298225 . - . ID=gene-CCO35_RS15560;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=CCO35_RS15560;old_locus_tag=CCO35_15550 NZ_NPME01000004.1 Protein Homology CDS 297797 298225 . - 0 ID=cds-WP_094965361.1;Parent=gene-CCO35_RS15560;Dbxref=GenBank:WP_094965361.1;Name=WP_094965361.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=CCO35_RS15560;product=universal stress protein UspC;protein_id=WP_094965361.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 298222 298338 . - . ID=gene-CCO35_RS15565;Name=CCO35_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15565;old_locus_tag=CCO35_15555 NZ_NPME01000004.1 Protein Homology CDS 298222 298338 . - 0 ID=cds-WP_001604673.1;Parent=gene-CCO35_RS15565;Dbxref=GenBank:WP_001604673.1;Name=WP_001604673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=CCO35_RS15565;product=hypothetical protein;protein_id=WP_001604673.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 299021 299362 . + . ID=gene-CCO35_RS15570;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=CCO35_RS15570;old_locus_tag=CCO35_15560 NZ_NPME01000004.1 Protein Homology CDS 299021 299362 . + 0 ID=cds-WP_001518146.1;Parent=gene-CCO35_RS15570;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=CCO35_RS15570;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 299359 299943 . + . ID=gene-CCO35_RS15575;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=CCO35_RS15575;old_locus_tag=CCO35_15565 NZ_NPME01000004.1 Protein Homology CDS 299359 299943 . + 0 ID=cds-WP_000605987.1;Parent=gene-CCO35_RS15575;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=CCO35_RS15575;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 300068 300955 . + . ID=gene-CCO35_RS15580;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=CCO35_RS15580;old_locus_tag=CCO35_15570 NZ_NPME01000004.1 Protein Homology CDS 300068 300955 . + 0 ID=cds-WP_000906312.1;Parent=gene-CCO35_RS15580;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=CCO35_RS15580;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 300952 301881 . + . ID=gene-CCO35_RS15585;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=CCO35_RS15585;old_locus_tag=CCO35_15575 NZ_NPME01000004.1 Protein Homology CDS 300952 301881 . + 0 ID=cds-WP_000795653.1;Parent=gene-CCO35_RS15585;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=CCO35_RS15585;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 301886 303901 . + . ID=gene-CCO35_RS15590;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=CCO35_RS15590;old_locus_tag=CCO35_15580 NZ_NPME01000004.1 Protein Homology CDS 301886 303901 . + 0 ID=cds-WP_000061310.1;Parent=gene-CCO35_RS15590;Dbxref=GenBank:WP_000061310.1;Name=WP_000061310.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=CCO35_RS15590;product=chemotaxis protein CheA;protein_id=WP_000061310.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 303922 304425 . + . ID=gene-CCO35_RS15595;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=CCO35_RS15595;old_locus_tag=CCO35_15585 NZ_NPME01000004.1 Protein Homology CDS 303922 304425 . + 0 ID=cds-WP_000147295.1;Parent=gene-CCO35_RS15595;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=CCO35_RS15595;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 304662 306323 . + . ID=gene-CCO35_RS15600;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=CCO35_RS15600;old_locus_tag=CCO35_15590 NZ_NPME01000004.1 Protein Homology CDS 304662 306323 . + 0 ID=cds-WP_000483279.1;Parent=gene-CCO35_RS15600;Dbxref=GenBank:WP_000483279.1;Name=WP_000483279.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=CCO35_RS15600;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483279.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 306484 307350 . + . ID=gene-CCO35_RS15605;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=CCO35_RS15605;old_locus_tag=CCO35_15595 NZ_NPME01000004.1 Protein Homology CDS 306484 307350 . + 0 ID=cds-WP_000204370.1;Parent=gene-CCO35_RS15605;Dbxref=GenBank:WP_000204370.1;Name=WP_000204370.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=CCO35_RS15605;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204370.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 307347 308396 . + . ID=gene-CCO35_RS15610;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=CCO35_RS15610;old_locus_tag=CCO35_15600 NZ_NPME01000004.1 Protein Homology CDS 307347 308396 . + 0 ID=cds-WP_000036404.1;Parent=gene-CCO35_RS15610;Dbxref=GenBank:WP_000036404.1;Name=WP_000036404.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=CCO35_RS15610;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036404.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 308414 308803 . + . ID=gene-CCO35_RS15615;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=CCO35_RS15615;old_locus_tag=CCO35_15605 NZ_NPME01000004.1 Protein Homology CDS 308414 308803 . + 0 ID=cds-WP_000763861.1;Parent=gene-CCO35_RS15615;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=CCO35_RS15615;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 308814 309458 . + . ID=gene-CCO35_RS15620;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=CCO35_RS15620;old_locus_tag=CCO35_15610 NZ_NPME01000004.1 Protein Homology CDS 308814 309458 . + 0 ID=cds-WP_000983586.1;Parent=gene-CCO35_RS15620;Dbxref=GenBank:WP_000983586.1;Name=WP_000983586.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=CCO35_RS15620;product=protein phosphatase CheZ;protein_id=WP_000983586.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 309652 310803 . + . ID=gene-CCO35_RS15625;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=CCO35_RS15625;old_locus_tag=CCO35_15615 NZ_NPME01000004.1 Protein Homology CDS 309652 310803 . + 0 ID=cds-WP_000797084.1;Parent=gene-CCO35_RS15625;Dbxref=GenBank:WP_000797084.1;Name=WP_000797084.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=CCO35_RS15625;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797084.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 310796 312874 . + . ID=gene-CCO35_RS15630;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO35_RS15630;old_locus_tag=CCO35_15620 NZ_NPME01000004.1 Protein Homology CDS 310796 312874 . + 0 ID=cds-WP_000002386.1;Parent=gene-CCO35_RS15630;Dbxref=GenBank:WP_000002386.1;Name=WP_000002386.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=CCO35_RS15630;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002386.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 312874 313266 . + . ID=gene-CCO35_RS15635;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=CCO35_RS15635;old_locus_tag=CCO35_15625 NZ_NPME01000004.1 Protein Homology CDS 312874 313266 . + 0 ID=cds-WP_001233619.1;Parent=gene-CCO35_RS15635;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=CCO35_RS15635;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 313503 314642 . + . ID=gene-CCO35_RS15640;Name=CCO35_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15640;old_locus_tag=CCO35_15630 NZ_NPME01000004.1 Protein Homology CDS 313503 314642 . + 0 ID=cds-WP_000989909.1;Parent=gene-CCO35_RS15640;Dbxref=GenBank:WP_000989909.1;Name=WP_000989909.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=CCO35_RS15640;product=glycoside hydrolase family 88/105 protein;protein_id=WP_000989909.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 314696 316567 . - . ID=gene-CCO35_RS15645;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO35_RS15645;old_locus_tag=CCO35_15635 NZ_NPME01000004.1 Protein Homology CDS 314696 316567 . - 0 ID=cds-WP_000142857.1;Parent=gene-CCO35_RS15645;Dbxref=GenBank:WP_000142857.1;Name=WP_000142857.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=CCO35_RS15645;product=penicillin-binding protein 2;protein_id=WP_000142857.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 316756 318489 . - . ID=gene-CCO35_RS15650;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CCO35_RS15650;old_locus_tag=CCO35_15640 NZ_NPME01000004.1 Protein Homology CDS 316756 318489 . - 0 ID=cds-WP_001025360.1;Parent=gene-CCO35_RS15650;Dbxref=GenBank:WP_001025360.1;Name=WP_001025360.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=CCO35_RS15650;product=arginine--tRNA ligase;protein_id=WP_001025360.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 318726 319295 . + . ID=gene-CCO35_RS15655;Name=CCO35_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15655;old_locus_tag=CCO35_15645 NZ_NPME01000004.1 Protein Homology CDS 318726 319295 . + 0 ID=cds-WP_000024794.1;Parent=gene-CCO35_RS15655;Dbxref=GenBank:WP_000024794.1;Name=WP_000024794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=CCO35_RS15655;product=VOC family protein;protein_id=WP_000024794.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 319315 320061 . + . ID=gene-CCO35_RS15660;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=CCO35_RS15660;old_locus_tag=CCO35_15650 NZ_NPME01000004.1 Protein Homology CDS 319315 320061 . + 0 ID=cds-WP_001185781.1;Parent=gene-CCO35_RS15660;Dbxref=GenBank:WP_001185781.1;Name=WP_001185781.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=CCO35_RS15660;product=copper homeostasis protein CutC;protein_id=WP_001185781.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 320297 321268 . - . ID=gene-CCO35_RS15670;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=CCO35_RS15670;old_locus_tag=CCO35_15660 NZ_NPME01000004.1 Protein Homology CDS 320297 321268 . - 0 ID=cds-WP_000569026.1;Parent=gene-CCO35_RS15670;Dbxref=GenBank:WP_000569026.1;Name=WP_000569026.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=CCO35_RS15670;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000569026.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 321265 322008 . - . ID=gene-CCO35_RS15675;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=CCO35_RS15675;old_locus_tag=CCO35_15665 NZ_NPME01000004.1 Protein Homology CDS 321265 322008 . - 0 ID=cds-WP_000019609.1;Parent=gene-CCO35_RS15675;Dbxref=GenBank:WP_000019609.1;Name=WP_000019609.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=CCO35_RS15675;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019609.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 322049 322444 . - . ID=gene-CCO35_RS15680;Name=CCO35_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15680;old_locus_tag=CCO35_15670 NZ_NPME01000004.1 Protein Homology CDS 322049 322444 . - 0 ID=cds-WP_000252975.1;Parent=gene-CCO35_RS15680;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=CCO35_RS15680;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 322497 323315 . - . ID=gene-CCO35_RS15685;Name=CCO35_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15685;old_locus_tag=CCO35_15675 NZ_NPME01000004.1 Protein Homology CDS 322497 323315 . - 0 ID=cds-WP_000639226.1;Parent=gene-CCO35_RS15685;Dbxref=GenBank:WP_000639226.1;Name=WP_000639226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=CCO35_RS15685;product=DUF72 domain-containing protein;protein_id=WP_000639226.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 323312 323878 . - . ID=gene-CCO35_RS15690;Name=CCO35_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15690;old_locus_tag=CCO35_15680 NZ_NPME01000004.1 Protein Homology CDS 323312 323878 . - 0 ID=cds-WP_000916144.1;Parent=gene-CCO35_RS15690;Dbxref=GenBank:WP_000916144.1;Name=WP_000916144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=CCO35_RS15690;product=hydrolase;protein_id=WP_000916144.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 324203 325975 . + . ID=gene-CCO35_RS15695;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CCO35_RS15695;old_locus_tag=CCO35_15685 NZ_NPME01000004.1 Protein Homology CDS 324203 325975 . + 0 ID=cds-WP_001258629.1;Parent=gene-CCO35_RS15695;Dbxref=GenBank:WP_001258629.1;Name=WP_001258629.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=CCO35_RS15695;product=aspartate--tRNA ligase;protein_id=WP_001258629.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 326078 326530 . + . ID=gene-CCO35_RS15700;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=CCO35_RS15700;old_locus_tag=CCO35_15690 NZ_NPME01000004.1 Protein Homology CDS 326078 326530 . + 0 ID=cds-WP_000653693.1;Parent=gene-CCO35_RS15700;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=CCO35_RS15700;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 326560 327300 . + . ID=gene-CCO35_RS15705;Name=CCO35_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15705;old_locus_tag=CCO35_15695 NZ_NPME01000004.1 Protein Homology CDS 326560 327300 . + 0 ID=cds-WP_000907242.1;Parent=gene-CCO35_RS15705;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=CCO35_RS15705;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 327337 327858 . + . ID=gene-CCO35_RS15710;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=CCO35_RS15710;old_locus_tag=CCO35_15700 NZ_NPME01000004.1 Protein Homology CDS 327337 327858 . + 0 ID=cds-WP_000022509.1;Parent=gene-CCO35_RS15710;Dbxref=GenBank:WP_000022509.1;Name=WP_000022509.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=CCO35_RS15710;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022509.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 327860 328459 . - . ID=gene-CCO35_RS15715;Name=CCO35_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15715;old_locus_tag=CCO35_15705 NZ_NPME01000004.1 Protein Homology CDS 327860 328459 . - 0 ID=cds-WP_000716739.1;Parent=gene-CCO35_RS15715;Dbxref=GenBank:WP_000716739.1;Name=WP_000716739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=CCO35_RS15715;product=YebB family permuted papain-like enzyme;protein_id=WP_000716739.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 328670 329362 . + . ID=gene-CCO35_RS15720;Name=CCO35_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15720;old_locus_tag=CCO35_15710 NZ_NPME01000004.1 Protein Homology CDS 328670 329362 . + 0 ID=cds-WP_000227318.1;Parent=gene-CCO35_RS15720;Dbxref=GenBank:WP_000227318.1;Name=WP_000227318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=CCO35_RS15720;product=hypothetical protein;protein_id=WP_000227318.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 329722 330333 . + . ID=gene-CCO35_RS15725;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CCO35_RS15725;old_locus_tag=CCO35_15715 NZ_NPME01000004.1 Protein Homology CDS 329722 330333 . + 0 ID=cds-WP_000580333.1;Parent=gene-CCO35_RS15725;Dbxref=GenBank:WP_000580333.1;Name=WP_000580333.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=CCO35_RS15725;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580333.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 330342 331352 . + . ID=gene-CCO35_RS15730;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CCO35_RS15730;old_locus_tag=CCO35_15720 NZ_NPME01000004.1 Protein Homology CDS 330342 331352 . + 0 ID=cds-WP_000568508.1;Parent=gene-CCO35_RS15730;Dbxref=GenBank:WP_000568508.1;Name=WP_000568508.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=CCO35_RS15730;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568508.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 331431 332216 . - . ID=gene-CCO35_RS15735;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=CCO35_RS15735;old_locus_tag=CCO35_15725 NZ_NPME01000004.1 Protein Homology CDS 331431 332216 . - 0 ID=cds-WP_000571508.1;Parent=gene-CCO35_RS15735;Dbxref=GenBank:WP_000571508.1;Name=WP_000571508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=CCO35_RS15735;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571508.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 332213 332968 . - . ID=gene-CCO35_RS15740;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=CCO35_RS15740;old_locus_tag=CCO35_15730 NZ_NPME01000004.1 Protein Homology CDS 332213 332968 . - 0 ID=cds-WP_000203023.1;Parent=gene-CCO35_RS15740;Dbxref=GenBank:WP_000203023.1;Name=WP_000203023.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=CCO35_RS15740;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203023.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 333047 333991 . + . ID=gene-CCO35_RS15745;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=CCO35_RS15745;old_locus_tag=CCO35_15735 NZ_NPME01000004.1 Protein Homology CDS 333047 333991 . + 0 ID=cds-WP_000939597.1;Parent=gene-CCO35_RS15745;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=CCO35_RS15745;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 334007 335326 . + . ID=gene-CCO35_RS15750;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=CCO35_RS15750;old_locus_tag=CCO35_15740 NZ_NPME01000004.1 Protein Homology CDS 334007 335326 . + 0 ID=cds-WP_001184029.1;Parent=gene-CCO35_RS15750;Dbxref=GenBank:WP_001184029.1;Name=WP_001184029.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=CCO35_RS15750;product=murein DD-endopeptidase MepM;protein_id=WP_001184029.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 335443 336414 . + . ID=gene-CCO35_RS15760;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=CCO35_RS15760;old_locus_tag=CCO35_15750 NZ_NPME01000004.1 Protein Homology CDS 335443 336414 . + 0 ID=cds-WP_000448397.1;Parent=gene-CCO35_RS15760;Dbxref=GenBank:WP_000448397.1;Name=WP_000448397.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=CCO35_RS15760;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448397.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 336487 337929 . - . ID=gene-CCO35_RS15765;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CCO35_RS15765;old_locus_tag=CCO35_15755 NZ_NPME01000004.1 Protein Homology CDS 336487 337929 . - 0 ID=cds-WP_000091156.1;Parent=gene-CCO35_RS15765;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=CCO35_RS15765;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 338053 338922 . - . ID=gene-CCO35_RS15770;Name=CCO35_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15770;old_locus_tag=CCO35_15760 NZ_NPME01000004.1 Protein Homology CDS 338053 338922 . - 0 ID=cds-WP_001056719.1;Parent=gene-CCO35_RS15770;Dbxref=GenBank:WP_001056719.1;Name=WP_001056719.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=CCO35_RS15770;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001056719.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 339264 340739 . + . ID=gene-CCO35_RS15780;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CCO35_RS15780;old_locus_tag=CCO35_15770 NZ_NPME01000004.1 Protein Homology CDS 339264 340739 . + 0 ID=cds-WP_000301711.1;Parent=gene-CCO35_RS15780;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=CCO35_RS15780;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 340974 342785 . + . ID=gene-CCO35_RS15785;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=CCO35_RS15785;old_locus_tag=CCO35_15775 NZ_NPME01000004.1 Protein Homology CDS 340974 342785 . + 0 ID=cds-WP_023196805.1;Parent=gene-CCO35_RS15785;Dbxref=GenBank:WP_023196805.1;Name=WP_023196805.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=CCO35_RS15785;product=phosphogluconate dehydratase;protein_id=WP_023196805.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 342823 343464 . + . ID=gene-CCO35_RS15790;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=CCO35_RS15790;old_locus_tag=CCO35_15780 NZ_NPME01000004.1 Protein Homology CDS 342823 343464 . + 0 ID=cds-WP_000800497.1;Parent=gene-CCO35_RS15790;Dbxref=GenBank:WP_000800497.1;Name=WP_000800497.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=CCO35_RS15790;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800497.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 343564 344742 . - . ID=gene-CCO35_RS15795;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=CCO35_RS15795;old_locus_tag=CCO35_15785 NZ_NPME01000004.1 Protein Homology CDS 343564 344742 . - 0 ID=cds-WP_001529220.1;Parent=gene-CCO35_RS15795;Dbxref=GenBank:WP_001529220.1;Name=WP_001529220.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=CCO35_RS15795;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_001529220.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 344873 345163 . + . ID=gene-CCO35_RS15800;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=CCO35_RS15800;old_locus_tag=CCO35_15790 NZ_NPME01000004.1 Protein Homology CDS 344873 345163 . + 0 ID=cds-WP_000257723.1;Parent=gene-CCO35_RS15800;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=CCO35_RS15800;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 345231 345584 . + . ID=gene-CCO35_RS15805;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=CCO35_RS15805;old_locus_tag=CCO35_15795 NZ_NPME01000004.1 Protein Homology CDS 345231 345584 . + 0 ID=cds-WP_001042123.1;Parent=gene-CCO35_RS15805;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=CCO35_RS15805;product=protein YebF;protein_id=WP_001042123.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 345678 346337 . + . ID=gene-CCO35_RS15810;Name=CCO35_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15810;old_locus_tag=CCO35_15800 NZ_NPME01000004.1 Protein Homology CDS 345678 346337 . + 0 ID=cds-WP_000024703.1;Parent=gene-CCO35_RS15810;Dbxref=GenBank:WP_000024703.1;Name=WP_000024703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=CCO35_RS15810;product=tellurite resistance TerB family protein;protein_id=WP_000024703.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 346550 348601 . + . ID=gene-CCO35_RS15815;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=CCO35_RS15815;old_locus_tag=CCO35_15805 NZ_NPME01000004.1 Protein Homology CDS 346550 348601 . + 0 ID=cds-WP_000936990.1;Parent=gene-CCO35_RS15815;Dbxref=GenBank:WP_000936990.1;Name=WP_000936990.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=CCO35_RS15815;product=oligopeptidase B;protein_id=WP_000936990.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 348638 349336 . - . ID=gene-CCO35_RS15820;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=CCO35_RS15820;old_locus_tag=CCO35_15810 NZ_NPME01000004.1 Protein Homology CDS 348638 349336 . - 0 ID=cds-WP_000944280.1;Parent=gene-CCO35_RS15820;Dbxref=GenBank:WP_000944280.1;Name=WP_000944280.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=CCO35_RS15820;product=exodeoxyribonuclease X;protein_id=WP_000944280.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 349360 350016 . - . ID=gene-CCO35_RS15825;Name=CCO35_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15825;old_locus_tag=CCO35_15815 NZ_NPME01000004.1 Protein Homology CDS 349360 350016 . - 0 ID=cds-WP_000100257.1;Parent=gene-CCO35_RS15825;Dbxref=GenBank:WP_000100257.1;Name=WP_000100257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=CCO35_RS15825;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000100257.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 350123 350353 . - . ID=gene-CCO35_RS15830;Name=CCO35_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15830;old_locus_tag=CCO35_15820 NZ_NPME01000004.1 Protein Homology CDS 350123 350353 . - 0 ID=cds-WP_000856225.1;Parent=gene-CCO35_RS15830;Dbxref=GenBank:WP_000856225.1;Name=WP_000856225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=CCO35_RS15830;product=DNA polymerase III subunit theta;protein_id=WP_000856225.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 350491 350865 . + . ID=gene-CCO35_RS15835;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=CCO35_RS15835;old_locus_tag=CCO35_15825 NZ_NPME01000004.1 Protein Homology CDS 350491 350865 . + 0 ID=cds-WP_000168393.1;Parent=gene-CCO35_RS15835;Dbxref=GenBank:WP_000168393.1;Name=WP_000168393.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=CCO35_RS15835;product=CopC domain-containing protein YobA;protein_id=WP_000168393.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 350866 351741 . + . ID=gene-CCO35_RS15840;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=CCO35_RS15840;old_locus_tag=CCO35_15830 NZ_NPME01000004.1 Protein Homology CDS 350866 351741 . + 0 ID=cds-WP_000979696.1;Parent=gene-CCO35_RS15840;Dbxref=GenBank:WP_000979696.1;Name=WP_000979696.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=CCO35_RS15840;product=copper homeostasis membrane protein CopD;protein_id=WP_000979696.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 351758 352111 . + . ID=gene-CCO35_RS15845;Name=CCO35_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15845;old_locus_tag=CCO35_15835 NZ_NPME01000004.1 Protein Homology CDS 351758 352111 . + 0 ID=cds-WP_000722368.1;Parent=gene-CCO35_RS15845;Dbxref=GenBank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=CCO35_RS15845;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 352494 353126 . - . ID=gene-CCO35_RS15860;Name=CCO35_RS15860;end_range=353126,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15860;old_locus_tag=CCO35_15850;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 352494 353126 . - 0 ID=cds-CCO35_RS15860;Parent=gene-CCO35_RS15860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=353126,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=CCO35_RS15860;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 353125 353412 . + . ID=gene-CCO35_RS15865;Name=CCO35_RS15865;end_range=353412,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15865;old_locus_tag=CCO35_15855;partial=true;pseudo=true;start_range=.,353125 NZ_NPME01000004.1 Protein Homology CDS 353125 353412 . + 0 ID=cds-CCO35_RS15865;Parent=gene-CCO35_RS15865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=353412,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252716.1;locus_tag=CCO35_RS15865;partial=true;product=hypothetical protein;pseudo=true;start_range=.,353125;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 353384 354034 . + . ID=gene-CCO35_RS24100;Name=CCO35_RS24100;end_range=354034,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24100;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 353384 354034 . + 0 ID=cds-CCO35_RS24100;Parent=gene-CCO35_RS24100;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=354034,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143161.1;locus_tag=CCO35_RS24100;partial=true;product=DUF4376 domain-containing protein;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq gene 354053 354430 . + . ID=gene-CCO35_RS24105;Name=CCO35_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24105 NZ_NPME01000004.1 Protein Homology CDS 354053 354430 . + 0 ID=cds-WP_042842358.1;Parent=gene-CCO35_RS24105;Dbxref=GenBank:WP_042842358.1;Name=WP_042842358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277619.1;locus_tag=CCO35_RS24105;product=DUF1353 domain-containing protein;protein_id=WP_042842358.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 354434 354544 . + . ID=gene-CCO35_RS15875;Name=CCO35_RS15875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15875;old_locus_tag=CCO35_15865;partial=true;pseudo=true;start_range=.,354434 NZ_NPME01000004.1 Protein Homology CDS 354434 354544 . + 0 ID=cds-CCO35_RS15875;Parent=gene-CCO35_RS15875;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006337.1;locus_tag=CCO35_RS15875;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,354434;transl_table=11 NZ_NPME01000004.1 RefSeq gene 354635 354820 . - . ID=gene-CCO35_RS15880;Name=CCO35_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15880;old_locus_tag=CCO35_15870 NZ_NPME01000004.1 Protein Homology CDS 354635 354820 . - 0 ID=cds-WP_071585801.1;Parent=gene-CCO35_RS15880;Dbxref=GenBank:WP_071585801.1;Name=WP_071585801.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=CCO35_RS15880;product=PagK family vesicle-borne virulence factor;protein_id=WP_071585801.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 355066 355242 . - . ID=gene-CCO35_RS15885;Name=CCO35_RS15885;end_range=355242,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15885;old_locus_tag=CCO35_15875;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 355066 355242 . - 0 ID=cds-CCO35_RS15885;Parent=gene-CCO35_RS15885;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=355242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421109.1;locus_tag=CCO35_RS15885;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq gene 355259 356029 . - . ID=gene-CCO35_RS15890;Name=CCO35_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15890;old_locus_tag=CCO35_15880 NZ_NPME01000004.1 Protein Homology CDS 355259 356029 . - 0 ID=cds-WP_000758580.1;Parent=gene-CCO35_RS15890;Dbxref=GenBank:WP_000758580.1;Name=WP_000758580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750685.1;locus_tag=CCO35_RS15890;product=transporter substrate-binding domain-containing protein;protein_id=WP_000758580.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 356520 356648 . + . ID=gene-CCO35_RS23695;Name=CCO35_RS23695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23695;partial=true;pseudo=true;start_range=.,356520 NZ_NPME01000004.1 Protein Homology CDS 356520 356648 . + 0 ID=cds-CCO35_RS23695;Parent=gene-CCO35_RS23695;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904921.1;locus_tag=CCO35_RS23695;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,356520;transl_table=11 NZ_NPME01000004.1 RefSeq gene 356677 357477 . - . ID=gene-CCO35_RS15895;Name=CCO35_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15895;old_locus_tag=CCO35_15885 NZ_NPME01000004.1 Protein Homology CDS 356677 357477 . - 0 ID=cds-WP_001542520.1;Parent=gene-CCO35_RS15895;Dbxref=GenBank:WP_001542520.1;Name=WP_001542520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586172.1;locus_tag=CCO35_RS15895;product=hypothetical protein;protein_id=WP_001542520.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 358421 358729 . - . ID=gene-CCO35_RS15900;Name=CCO35_RS15900;end_range=358729,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15900;old_locus_tag=CCO35_15890;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 358421 358729 . - 0 ID=cds-CCO35_RS15900;Parent=gene-CCO35_RS15900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=358729,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087641.1;locus_tag=CCO35_RS15900;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 358728 359092 . - . ID=gene-CCO35_RS15905;Name=CCO35_RS15905;end_range=359092,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15905;old_locus_tag=CCO35_15895;partial=true;pseudo=true;start_range=.,358728 NZ_NPME01000004.1 Protein Homology CDS 358728 359092 . - 0 ID=cds-CCO35_RS15905;Parent=gene-CCO35_RS15905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006259,GO:0003677;end_range=359092,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415865.1;locus_tag=CCO35_RS15905;partial=true;product=recombinase RecT;pseudo=true;start_range=.,358728;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 359089 359199 . + . ID=gene-CCO35_RS24115;Name=CCO35_RS24115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24115;old_locus_tag=CCO35_15900;partial=true;pseudo=true;start_range=.,359089 NZ_NPME01000004.1 Protein Homology CDS 359089 359199 . + 0 ID=cds-CCO35_RS24115;Parent=gene-CCO35_RS24115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140163.1;locus_tag=CCO35_RS24115;partial=true;product=replication protein P;pseudo=true;start_range=.,359089;transl_table=11 NZ_NPME01000004.1 RefSeq gene 359212 359607 . + . ID=gene-CCO35_RS15915;Name=CCO35_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15915;old_locus_tag=CCO35_15905 NZ_NPME01000004.1 Protein Homology CDS 359212 359607 . + 0 ID=cds-WP_000089407.1;Parent=gene-CCO35_RS15915;Dbxref=GenBank:WP_000089407.1;Name=WP_000089407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=CCO35_RS15915;product=DUF977 family protein;protein_id=WP_000089407.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 359894 361024 . - . ID=gene-CCO35_RS15920;Name=CCO35_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15920;old_locus_tag=CCO35_15910 NZ_NPME01000004.1 Protein Homology CDS 359894 361024 . - 0 ID=cds-WP_094965363.1;Parent=gene-CCO35_RS15920;Dbxref=GenBank:WP_094965363.1;Name=WP_094965363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529511.1;locus_tag=CCO35_RS15920;product=GGDEF domain-containing protein;protein_id=WP_094965363.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 361420 361806 . + . ID=gene-CCO35_RS15925;Name=CCO35_RS15925;end_range=361806,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15925;old_locus_tag=CCO35_15915;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 361420 361806 . + 0 ID=cds-CCO35_RS15925;Parent=gene-CCO35_RS15925;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=361806,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237394.1;locus_tag=CCO35_RS15925;partial=true;product=hydrolase;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 361875 362156 . + . ID=gene-CCO35_RS15930;Name=CCO35_RS15930;end_range=362156,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15930;old_locus_tag=CCO35_15920;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 361875 362156 . + 0 ID=cds-CCO35_RS15930;Parent=gene-CCO35_RS15930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=362156,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO35_RS15930;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq gene 362209 362355 . - . ID=gene-CCO35_RS24360;Name=CCO35_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24360 NZ_NPME01000004.1 GeneMarkS-2+ CDS 362209 362355 . - 0 ID=cds-WP_000951652.1;Parent=gene-CCO35_RS24360;Dbxref=GenBank:WP_000951652.1;Name=WP_000951652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS24360;product=hypothetical protein;protein_id=WP_000951652.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 362370 362516 . + . ID=gene-CCO35_RS24365;Name=CCO35_RS24365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24365;partial=true;pseudo=true;start_range=.,362370 NZ_NPME01000004.1 Protein Homology CDS 362370 362516 . + 0 ID=cds-CCO35_RS24365;Parent=gene-CCO35_RS24365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219268.1;locus_tag=CCO35_RS24365;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,362370;transl_table=11 NZ_NPME01000004.1 RefSeq gene 362843 363457 . - . ID=gene-CCO35_RS15940;Name=CCO35_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15940;old_locus_tag=CCO35_15930 NZ_NPME01000004.1 Protein Homology CDS 362843 363457 . - 0 ID=cds-WP_000848064.1;Parent=gene-CCO35_RS15940;Dbxref=GenBank:WP_000848064.1;Name=WP_000848064.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=CCO35_RS15940;product=disulfide bond formation protein B;protein_id=WP_000848064.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 363467 363625 . - . ID=gene-CCO35_RS15945;Name=CCO35_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15945;old_locus_tag=CCO35_15935 NZ_NPME01000004.1 Protein Homology CDS 363467 363625 . - 0 ID=cds-WP_000480735.1;Parent=gene-CCO35_RS15945;Dbxref=GenBank:WP_000480735.1;Name=WP_000480735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=CCO35_RS15945;product=DUF5993 family protein;protein_id=WP_000480735.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 363758 364672 . - . ID=gene-CCO35_RS15950;Name=CCO35_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15950;old_locus_tag=CCO35_15940 NZ_NPME01000004.1 Protein Homology CDS 363758 364672 . - 0 ID=cds-WP_001233453.1;Parent=gene-CCO35_RS15950;Dbxref=GenBank:WP_001233453.1;Name=WP_001233453.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=CCO35_RS15950;product=DMT family transporter;protein_id=WP_001233453.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 365464 366029 . - . ID=gene-CCO35_RS15955;Name=CCO35_RS15955;end_range=366029,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15955;old_locus_tag=CCO35_15945;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 365464 366029 . - 0 ID=cds-CCO35_RS15955;Parent=gene-CCO35_RS15955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;end_range=366029,.;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO35_RS15955;partial=true;product=fimbrial protein;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 366016 366181 . + . ID=gene-CCO35_RS15960;Name=CCO35_RS15960;end_range=366181,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15960;old_locus_tag=CCO35_15950;partial=true;pseudo=true;start_range=.,366016 NZ_NPME01000004.1 Protein Homology CDS 366016 366181 . + 0 ID=cds-CCO35_RS15960;Parent=gene-CCO35_RS15960;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=366181,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO35_RS15960;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,366016;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 366194 366726 . + . ID=gene-CCO35_RS15965;Name=CCO35_RS15965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS15965;old_locus_tag=CCO35_15955;partial=true;pseudo=true;start_range=.,366194 NZ_NPME01000004.1 Protein Homology CDS 366194 366726 . + 0 ID=cds-CCO35_RS15965;Parent=gene-CCO35_RS15965;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO35_RS15965;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,366194;transl_table=11 NZ_NPME01000004.1 RefSeq gene 366872 367012 . - . ID=gene-CCO35_RS15970;Name=CCO35_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15970;old_locus_tag=CCO35_15960 NZ_NPME01000004.1 Protein Homology CDS 366872 367012 . - 0 ID=cds-WP_001611546.1;Parent=gene-CCO35_RS15970;Dbxref=GenBank:WP_001611546.1;Name=WP_001611546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460815.3;locus_tag=CCO35_RS15970;product=hypothetical protein;protein_id=WP_001611546.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 367178 367447 . - . ID=gene-CCO35_RS15975;Name=CCO35_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15975;old_locus_tag=CCO35_15965 NZ_NPME01000004.1 Protein Homology CDS 367178 367447 . - 0 ID=cds-WP_001611547.1;Parent=gene-CCO35_RS15975;Dbxref=GenBank:WP_001611547.1;Name=WP_001611547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=CCO35_RS15975;product=hypothetical protein;protein_id=WP_001611547.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 367487 367687 . + . ID=gene-CCO35_RS15980;Name=CCO35_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15980;old_locus_tag=CCO35_15970 NZ_NPME01000004.1 Protein Homology CDS 367487 367687 . + 0 ID=cds-WP_000007801.1;Parent=gene-CCO35_RS15980;Dbxref=GenBank:WP_000007801.1;Name=WP_000007801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007801.1;locus_tag=CCO35_RS15980;product=hypothetical protein;protein_id=WP_000007801.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 367816 368235 . + . ID=gene-CCO35_RS15985;Name=CCO35_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15985;old_locus_tag=CCO35_15975 NZ_NPME01000004.1 Protein Homology CDS 367816 368235 . + 0 ID=cds-WP_000354410.1;Parent=gene-CCO35_RS15985;Dbxref=GenBank:WP_000354410.1;Name=WP_000354410.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=CCO35_RS15985;product=GNAT family N-acetyltransferase;protein_id=WP_000354410.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 368623 369099 . - . ID=gene-CCO35_RS15990;Name=CCO35_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15990;old_locus_tag=CCO35_15980 NZ_NPME01000004.1 Protein Homology CDS 368623 369099 . - 0 ID=cds-WP_000102093.1;Parent=gene-CCO35_RS15990;Dbxref=GenBank:WP_000102093.1;Name=WP_000102093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=CCO35_RS15990;product=hypothetical protein;protein_id=WP_000102093.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 369427 369822 . - . ID=gene-CCO35_RS15995;Name=CCO35_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS15995;old_locus_tag=CCO35_15985 NZ_NPME01000004.1 Protein Homology CDS 369427 369822 . - 0 ID=cds-WP_000422887.1;Parent=gene-CCO35_RS15995;Dbxref=GenBank:WP_000422887.1;Name=WP_000422887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=CCO35_RS15995;product=DUF1398 domain-containing protein;protein_id=WP_000422887.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 370506 371228 . + . ID=gene-CCO35_RS16000;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=CCO35_RS16000;old_locus_tag=CCO35_15990 NZ_NPME01000004.1 Protein Homology CDS 370506 371228 . + 0 ID=cds-WP_000182077.1;Parent=gene-CCO35_RS16000;Dbxref=GenBank:WP_000182077.1;Name=WP_000182077.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=CCO35_RS16000;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_000182077.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 371513 371677 . + . ID=gene-CCO35_RS16005;Name=CCO35_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16005;old_locus_tag=CCO35_15995 NZ_NPME01000004.1 Protein Homology CDS 371513 371677 . + 0 ID=cds-WP_001134850.1;Parent=gene-CCO35_RS16005;Dbxref=GenBank:WP_001134850.1;Name=WP_001134850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=CCO35_RS16005;product=hypothetical protein;protein_id=WP_001134850.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 371902 372552 . + . ID=gene-CCO35_RS16010;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=CCO35_RS16010;old_locus_tag=CCO35_16000 NZ_NPME01000004.1 Protein Homology CDS 371902 372552 . + 0 ID=cds-WP_031568237.1;Parent=gene-CCO35_RS16010;Dbxref=GenBank:WP_031568237.1;Name=WP_031568237.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=CCO35_RS16010;product=protein-serine/threonine phosphatase;protein_id=WP_031568237.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 372571 372762 . - . ID=gene-CCO35_RS16015;Name=CCO35_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16015;old_locus_tag=CCO35_16005 NZ_NPME01000004.1 Protein Homology CDS 372571 372762 . - 0 ID=cds-WP_000457835.1;Parent=gene-CCO35_RS16015;Dbxref=GenBank:WP_000457835.1;Name=WP_000457835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=CCO35_RS16015;product=YebW family protein;protein_id=WP_000457835.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 372873 373109 . - . ID=gene-CCO35_RS16020;Name=CCO35_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16020;old_locus_tag=CCO35_16010 NZ_NPME01000004.1 Protein Homology CDS 372873 373109 . - 0 ID=cds-WP_024131167.1;Parent=gene-CCO35_RS16020;Dbxref=GenBank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=CCO35_RS16020;product=YebV family protein;protein_id=WP_024131167.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 373227 374666 . - . ID=gene-CCO35_RS16025;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=CCO35_RS16025;old_locus_tag=CCO35_16015 NZ_NPME01000004.1 Protein Homology CDS 373227 374666 . - 0 ID=cds-WP_001633706.1;Parent=gene-CCO35_RS16025;Dbxref=GenBank:WP_001633706.1;Name=WP_001633706.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=CCO35_RS16025;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_001633706.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 374744 377377 . - . ID=gene-CCO35_RS16030;Name=CCO35_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16030;old_locus_tag=CCO35_16020 NZ_NPME01000004.1 Protein Homology CDS 374744 377377 . - 0 ID=cds-WP_001542507.1;Parent=gene-CCO35_RS16030;Dbxref=GenBank:WP_001542507.1;Name=WP_001542507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=CCO35_RS16030;product=PqiB family protein;protein_id=WP_001542507.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 377346 378629 . - . ID=gene-CCO35_RS16035;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=CCO35_RS16035;old_locus_tag=CCO35_16025 NZ_NPME01000004.1 Protein Homology CDS 377346 378629 . - 0 ID=cds-WP_023214462.1;Parent=gene-CCO35_RS16035;Dbxref=GenBank:WP_023214462.1;Name=WP_023214462.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=CCO35_RS16035;product=membrane integrity lipid transport subunit YebS;protein_id=WP_023214462.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 378758 379255 . + . ID=gene-CCO35_RS16040;Name=CCO35_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16040;old_locus_tag=CCO35_16030 NZ_NPME01000004.1 Protein Homology CDS 378758 379255 . + 0 ID=cds-WP_001518229.1;Parent=gene-CCO35_RS16040;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=CCO35_RS16040;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 379353 380039 . + . ID=gene-CCO35_RS16045;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=CCO35_RS16045;old_locus_tag=CCO35_16035 NZ_NPME01000004.1 Protein Homology CDS 379353 380039 . + 0 ID=cds-WP_000431401.1;Parent=gene-CCO35_RS16045;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=CCO35_RS16045;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 380059 382107 . + . ID=gene-CCO35_RS16050;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=CCO35_RS16050;old_locus_tag=CCO35_16040 NZ_NPME01000004.1 Protein Homology CDS 380059 382107 . + 0 ID=cds-WP_001091241.1;Parent=gene-CCO35_RS16050;Dbxref=GenBank:WP_001091241.1;Name=WP_001091241.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=CCO35_RS16050;product=carboxy terminal-processing peptidase;protein_id=WP_001091241.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 382300 383181 . + . ID=gene-CCO35_RS16055;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=CCO35_RS16055;old_locus_tag=CCO35_16045 NZ_NPME01000004.1 Protein Homology CDS 382300 383181 . + 0 ID=cds-WP_000984498.1;Parent=gene-CCO35_RS16055;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=CCO35_RS16055;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 383229 384602 . - . ID=gene-CCO35_RS16060;Name=CCO35_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16060;old_locus_tag=CCO35_16050 NZ_NPME01000004.1 Protein Homology CDS 383229 384602 . - 0 ID=cds-WP_000416142.1;Parent=gene-CCO35_RS16060;Dbxref=GenBank:WP_000416142.1;Name=WP_000416142.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=CCO35_RS16060;product=MFS transporter;protein_id=WP_000416142.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 384778 385569 . + . ID=gene-CCO35_RS16065;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=CCO35_RS16065;old_locus_tag=CCO35_16055 NZ_NPME01000004.1 Protein Homology CDS 384778 385569 . + 0 ID=cds-WP_001262195.1;Parent=gene-CCO35_RS16065;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=CCO35_RS16065;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 385781 386020 . - . ID=gene-CCO35_RS16070;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=CCO35_RS16070;old_locus_tag=CCO35_16060 NZ_NPME01000004.1 Protein Homology CDS 385781 386020 . - 0 ID=cds-WP_001236778.1;Parent=gene-CCO35_RS16070;Dbxref=GenBank:WP_001236778.1;Name=WP_001236778.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=CCO35_RS16070;product=invasion protein YobH;protein_id=WP_001236778.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 386178 386321 . + . ID=gene-CCO35_RS16075;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=CCO35_RS16075;old_locus_tag=CCO35_16065 NZ_NPME01000004.1 Protein Homology CDS 386178 386321 . + 0 ID=cds-WP_000714547.1;Parent=gene-CCO35_RS16075;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=CCO35_RS16075;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 386392 386679 . + . ID=gene-CCO35_RS16080;Name=CCO35_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16080;old_locus_tag=CCO35_16070 NZ_NPME01000004.1 Protein Homology CDS 386392 386679 . + 0 ID=cds-WP_001000660.1;Parent=gene-CCO35_RS16080;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=CCO35_RS16080;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 387328 387471 . + . ID=gene-CCO35_RS16085;Name=CCO35_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16085;old_locus_tag=CCO35_16075 NZ_NPME01000004.1 Protein Homology CDS 387328 387471 . + 0 ID=cds-WP_001537930.1;Parent=gene-CCO35_RS16085;Dbxref=GenBank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=CCO35_RS16085;product=DUF2627 domain-containing protein;protein_id=WP_001537930.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 387484 387693 . + . ID=gene-CCO35_RS16090;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO35_RS16090;old_locus_tag=CCO35_16080 NZ_NPME01000004.1 Protein Homology CDS 387484 387693 . + 0 ID=cds-WP_001062678.1;Parent=gene-CCO35_RS16090;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=CCO35_RS16090;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 387913 389658 . + . ID=gene-CCO35_RS16095;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO35_RS16095;old_locus_tag=CCO35_16085 NZ_NPME01000004.1 Protein Homology CDS 387913 389658 . + 0 ID=cds-WP_000730322.1;Parent=gene-CCO35_RS16095;Dbxref=GenBank:WP_000730322.1;Name=WP_000730322.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=CCO35_RS16095;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730322.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 389724 390533 . + . ID=gene-CCO35_RS16100;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=CCO35_RS16100;old_locus_tag=CCO35_16090 NZ_NPME01000004.1 Protein Homology CDS 389724 390533 . + 0 ID=cds-WP_000010916.1;Parent=gene-CCO35_RS16100;Dbxref=GenBank:WP_000010916.1;Name=WP_000010916.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=CCO35_RS16100;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010916.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 390530 391096 . - . ID=gene-CCO35_RS16105;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=CCO35_RS16105;old_locus_tag=CCO35_16095 NZ_NPME01000004.1 Protein Homology CDS 390530 391096 . - 0 ID=cds-WP_001518359.1;Parent=gene-CCO35_RS16105;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=CCO35_RS16105;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11 NZ_NPME01000004.1 cmsearch riboswitch 391208 391309 . - . ID=id-NZ_NPME01000004.1:391208..391309;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPME01000004.1 RefSeq gene 391506 391964 . - . ID=gene-CCO35_RS16115;Name=CCO35_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16115;old_locus_tag=CCO35_16105 NZ_NPME01000004.1 Protein Homology CDS 391506 391964 . - 0 ID=cds-WP_000156280.1;Parent=gene-CCO35_RS16115;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=CCO35_RS16115;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 392023 392874 . - . ID=gene-CCO35_RS16120;Name=CCO35_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16120;old_locus_tag=CCO35_16110 NZ_NPME01000004.1 Protein Homology CDS 392023 392874 . - 0 ID=cds-WP_001518647.1;Parent=gene-CCO35_RS16120;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=CCO35_RS16120;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 392887 393687 . - . ID=gene-CCO35_RS16125;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=CCO35_RS16125;old_locus_tag=CCO35_16115 NZ_NPME01000004.1 Protein Homology CDS 392887 393687 . - 0 ID=cds-WP_000406918.1;Parent=gene-CCO35_RS16125;Dbxref=GenBank:WP_000406918.1;Name=WP_000406918.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=CCO35_RS16125;product=PTS mannose transporter subunit IIC;protein_id=WP_000406918.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 393740 394708 . - . ID=gene-CCO35_RS16130;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=CCO35_RS16130;old_locus_tag=CCO35_16120 NZ_NPME01000004.1 Protein Homology CDS 393740 394708 . - 0 ID=cds-WP_000150523.1;Parent=gene-CCO35_RS16130;Dbxref=GenBank:WP_000150523.1;Name=WP_000150523.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=CCO35_RS16130;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150523.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 395026 395193 . + . ID=gene-CCO35_RS24370;Name=CCO35_RS24370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24370 NZ_NPME01000004.1 Protein Homology CDS 395026 395193 . + 0 ID=cds-WP_370739650.1;Parent=gene-CCO35_RS24370;Dbxref=GenBank:WP_370739650.1;Name=WP_370739650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=CCO35_RS24370;product=protein YoaL;protein_id=WP_370739650.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 395181 396740 . + . ID=gene-CCO35_RS16140;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=CCO35_RS16140;old_locus_tag=CCO35_16130 NZ_NPME01000004.1 Protein Homology CDS 395181 396740 . + 0 ID=cds-WP_000421815.1;Parent=gene-CCO35_RS16140;Dbxref=GenBank:WP_000421815.1;Name=WP_000421815.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=CCO35_RS16140;product=CNNM family cation transport protein YoaE;protein_id=WP_000421815.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 396762 398363 . - . ID=gene-CCO35_RS16145;Name=CCO35_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16145;old_locus_tag=CCO35_16135 NZ_NPME01000004.1 Protein Homology CDS 396762 398363 . - 0 ID=cds-WP_053258830.1;Parent=gene-CCO35_RS16145;Dbxref=GenBank:WP_053258830.1;Name=WP_053258830.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=CCO35_RS16145;product=EAL domain-containing protein;protein_id=WP_053258830.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 398501 399865 . - . ID=gene-CCO35_RS16150;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=CCO35_RS16150;old_locus_tag=CCO35_16140 NZ_NPME01000004.1 Protein Homology CDS 398501 399865 . - 0 ID=cds-WP_001530748.1;Parent=gene-CCO35_RS16150;Dbxref=GenBank:WP_001530748.1;Name=WP_001530748.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=CCO35_RS16150;product=L-serine ammonia-lyase;protein_id=WP_001530748.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 400129 400707 . - . ID=gene-CCO35_RS16155;Name=CCO35_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16155;old_locus_tag=CCO35_16145 NZ_NPME01000004.1 Protein Homology CDS 400129 400707 . - 0 ID=cds-WP_000381544.1;Parent=gene-CCO35_RS16155;Dbxref=GenBank:WP_000381544.1;Name=WP_000381544.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=CCO35_RS16155;product=CoA pyrophosphatase;protein_id=WP_000381544.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 400711 402075 . - . ID=gene-CCO35_RS16160;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=CCO35_RS16160;old_locus_tag=CCO35_16150 NZ_NPME01000004.1 Protein Homology CDS 400711 402075 . - 0 ID=cds-WP_000978466.1;Parent=gene-CCO35_RS16160;Dbxref=GenBank:WP_000978466.1;Name=WP_000978466.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=CCO35_RS16160;product=aminodeoxychorismate synthase component 1;protein_id=WP_000978466.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 402156 402335 . + . ID=gene-CCO35_RS16165;Name=CCO35_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16165;old_locus_tag=CCO35_16155 NZ_NPME01000004.1 Protein Homology CDS 402156 402335 . + 0 ID=cds-WP_000457328.1;Parent=gene-CCO35_RS16165;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=CCO35_RS16165;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 402341 402685 . - . ID=gene-CCO35_RS16170;Name=CCO35_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16170;old_locus_tag=CCO35_16160 NZ_NPME01000004.1 Protein Homology CDS 402341 402685 . - 0 ID=cds-WP_000029550.1;Parent=gene-CCO35_RS16170;Dbxref=GenBank:WP_000029550.1;Name=WP_000029550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=CCO35_RS16170;product=RidA family protein;protein_id=WP_000029550.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 402817 404727 . + . ID=gene-CCO35_RS16175;Name=CCO35_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16175;old_locus_tag=CCO35_16165 NZ_NPME01000004.1 Protein Homology CDS 402817 404727 . + 0 ID=cds-WP_000128807.1;Parent=gene-CCO35_RS16175;Dbxref=GenBank:WP_000128807.1;Name=WP_000128807.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=CCO35_RS16175;product=ATP-dependent DNA helicase;protein_id=WP_000128807.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 404785 405480 . + . ID=gene-CCO35_RS16180;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CCO35_RS16180;old_locus_tag=CCO35_16170 NZ_NPME01000004.1 Protein Homology CDS 404785 405480 . + 0 ID=cds-WP_001221017.1;Parent=gene-CCO35_RS16180;Dbxref=GenBank:WP_001221017.1;Name=WP_001221017.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=CCO35_RS16180;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221017.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 405552 406133 . + . ID=gene-CCO35_RS16185;Name=CCO35_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16185;old_locus_tag=CCO35_16175 NZ_NPME01000004.1 Protein Homology CDS 405552 406133 . + 0 ID=cds-WP_053258851.1;Parent=gene-CCO35_RS16185;Dbxref=GenBank:WP_053258851.1;Name=WP_053258851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=CCO35_RS16185;product=Slp family lipoprotein;protein_id=WP_053258851.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 406338 408023 . + . ID=gene-CCO35_RS16195;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CCO35_RS16195;old_locus_tag=CCO35_16185 NZ_NPME01000004.1 Protein Homology CDS 406338 408023 . + 0 ID=cds-WP_000758418.1;Parent=gene-CCO35_RS16195;Dbxref=GenBank:WP_000758418.1;Name=WP_000758418.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=CCO35_RS16195;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758418.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 408096 409223 . + . ID=gene-CCO35_RS16200;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=CCO35_RS16200;old_locus_tag=CCO35_16190 NZ_NPME01000004.1 Protein Homology CDS 408096 409223 . + 0 ID=cds-WP_001109124.1;Parent=gene-CCO35_RS16200;Dbxref=GenBank:WP_001109124.1;Name=WP_001109124.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=CCO35_RS16200;product=ribonuclease D;protein_id=WP_001109124.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 409345 409611 . - . ID=gene-CCO35_RS16205;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=CCO35_RS16205;old_locus_tag=CCO35_16195 NZ_NPME01000004.1 Protein Homology CDS 409345 409611 . - 0 ID=cds-WP_001185666.1;Parent=gene-CCO35_RS16205;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=CCO35_RS16205;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 409615 410427 . - . ID=gene-CCO35_RS16210;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=CCO35_RS16210;old_locus_tag=CCO35_16200 NZ_NPME01000004.1 Protein Homology CDS 409615 410427 . - 0 ID=cds-WP_000101047.1;Parent=gene-CCO35_RS16210;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=CCO35_RS16210;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 410451 411158 . - . ID=gene-CCO35_RS16215;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=CCO35_RS16215;old_locus_tag=CCO35_16205 NZ_NPME01000004.1 Protein Homology CDS 410451 411158 . - 0 ID=cds-WP_000072527.1;Parent=gene-CCO35_RS16215;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=CCO35_RS16215;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 411284 411577 . + . ID=gene-CCO35_RS16220;Name=CCO35_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16220;old_locus_tag=CCO35_16210 NZ_NPME01000004.1 Protein Homology CDS 411284 411577 . + 0 ID=cds-WP_001537109.1;Parent=gene-CCO35_RS16220;Dbxref=GenBank:WP_001537109.1;Name=WP_001537109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=CCO35_RS16220;product=YcgL domain-containing protein;protein_id=WP_001537109.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 411627 412286 . + . ID=gene-CCO35_RS16225;Name=CCO35_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16225;old_locus_tag=CCO35_16215 NZ_NPME01000004.1 Protein Homology CDS 411627 412286 . + 0 ID=cds-WP_001519895.1;Parent=gene-CCO35_RS16225;Dbxref=GenBank:WP_001519895.1;Name=WP_001519895.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=CCO35_RS16225;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001519895.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 412379 412825 . + . ID=gene-CCO35_RS16230;Name=CCO35_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16230;old_locus_tag=CCO35_16220 NZ_NPME01000004.1 Protein Homology CDS 412379 412825 . + 0 ID=cds-WP_001285703.1;Parent=gene-CCO35_RS16230;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=CCO35_RS16230;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 413177 413314 . + . ID=gene-CCO35_RS16235;Name=CCO35_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16235;old_locus_tag=CCO35_16225 NZ_NPME01000004.1 Protein Homology CDS 413177 413314 . + 0 ID=cds-WP_001519337.1;Parent=gene-CCO35_RS16235;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=CCO35_RS16235;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 413507 413680 . + . ID=gene-CCO35_RS16240;Name=CCO35_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16240;old_locus_tag=CCO35_16230 NZ_NPME01000004.1 Protein Homology CDS 413507 413680 . + 0 ID=cds-WP_001083582.1;Parent=gene-CCO35_RS16240;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=CCO35_RS16240;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 413752 414093 . - . ID=gene-CCO35_RS16245;Name=CCO35_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16245;old_locus_tag=CCO35_16235 NZ_NPME01000004.1 Protein Homology CDS 413752 414093 . - 0 ID=cds-WP_000018967.1;Parent=gene-CCO35_RS16245;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=CCO35_RS16245;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 414202 414732 . - . ID=gene-CCO35_RS16250;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=CCO35_RS16250;old_locus_tag=CCO35_16240 NZ_NPME01000004.1 Protein Homology CDS 414202 414732 . - 0 ID=cds-WP_031568269.1;Parent=gene-CCO35_RS16250;Dbxref=GenBank:WP_031568269.1;Name=WP_031568269.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=CCO35_RS16250;product=disulfide bond formation protein DsbB;protein_id=WP_031568269.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 414874 416418 . - . ID=gene-CCO35_RS16255;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=CCO35_RS16255;old_locus_tag=CCO35_16245 NZ_NPME01000004.1 Protein Homology CDS 414874 416418 . - 0 ID=cds-WP_094965364.1;Parent=gene-CCO35_RS16255;Dbxref=GenBank:WP_094965364.1;Name=WP_094965364.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=CCO35_RS16255;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_094965364.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 416638 417357 . + . ID=gene-CCO35_RS16260;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=CCO35_RS16260;old_locus_tag=CCO35_16250 NZ_NPME01000004.1 Protein Homology CDS 416638 417357 . + 0 ID=cds-WP_000234826.1;Parent=gene-CCO35_RS16260;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=CCO35_RS16260;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 417404 418936 . - . ID=gene-CCO35_RS16265;Name=CCO35_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16265;old_locus_tag=CCO35_16255 NZ_NPME01000004.1 Protein Homology CDS 417404 418936 . - 0 ID=cds-WP_000190831.1;Parent=gene-CCO35_RS16265;Dbxref=GenBank:WP_000190831.1;Name=WP_000190831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=CCO35_RS16265;product=SpoVR family protein;protein_id=WP_000190831.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 419259 420557 . + . ID=gene-CCO35_RS16270;Name=CCO35_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16270;old_locus_tag=CCO35_16260 NZ_NPME01000004.1 Protein Homology CDS 419259 420557 . + 0 ID=cds-WP_001266935.1;Parent=gene-CCO35_RS16270;Dbxref=GenBank:WP_001266935.1;Name=WP_001266935.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=CCO35_RS16270;product=D-amino acid dehydrogenase;protein_id=WP_001266935.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 420571 421641 . + . ID=gene-CCO35_RS16275;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=CCO35_RS16275;old_locus_tag=CCO35_16265 NZ_NPME01000004.1 Protein Homology CDS 420571 421641 . + 0 ID=cds-WP_000197909.1;Parent=gene-CCO35_RS16275;Dbxref=GenBank:WP_000197909.1;Name=WP_000197909.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=CCO35_RS16275;product=catabolic alanine racemase DadX;protein_id=WP_000197909.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 421674 421766 . + . ID=gene-CCO35_RS24375;Name=CCO35_RS24375;end_range=421766,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24375;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 421674 421766 . + 0 ID=cds-CCO35_RS24375;Parent=gene-CCO35_RS24375;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=421766,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=CCO35_RS24375;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 421722 423437 . - . ID=gene-CCO35_RS16280;Name=CCO35_RS16280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS16280;old_locus_tag=CCO35_16270;partial=true;pseudo=true;start_range=.,421722 NZ_NPME01000004.1 Protein Homology CDS 421722 423437 . - 0 ID=cds-CCO35_RS16280;Parent=gene-CCO35_RS16280;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=CCO35_RS16280;partial=true;product=potassium/proton antiporter;pseudo=true;start_range=.,421722;transl_table=11 NZ_NPME01000004.1 RefSeq gene 423534 424448 . - . ID=gene-CCO35_RS16285;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=CCO35_RS16285;old_locus_tag=CCO35_16275 NZ_NPME01000004.1 Protein Homology CDS 423534 424448 . - 0 ID=cds-WP_031568273.1;Parent=gene-CCO35_RS16285;Dbxref=GenBank:WP_031568273.1;Name=WP_031568273.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=CCO35_RS16285;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_031568273.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 424619 425230 . + . ID=gene-CCO35_RS16290;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=CCO35_RS16290;old_locus_tag=CCO35_16280 NZ_NPME01000004.1 Protein Homology CDS 424619 425230 . + 0 ID=cds-WP_000776972.1;Parent=gene-CCO35_RS16290;Dbxref=GenBank:WP_000776972.1;Name=WP_000776972.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=CCO35_RS16290;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776972.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 425244 425978 . - . ID=gene-CCO35_RS16295;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=CCO35_RS16295;old_locus_tag=CCO35_16285 NZ_NPME01000004.1 Protein Homology CDS 425244 425978 . - 0 ID=cds-WP_000017423.1;Parent=gene-CCO35_RS16295;Dbxref=GenBank:WP_000017423.1;Name=WP_000017423.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=CCO35_RS16295;product=flagellar brake protein YcgR;protein_id=WP_000017423.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 426147 426401 . + . ID=gene-CCO35_RS16300;Name=CCO35_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16300;old_locus_tag=CCO35_16290 NZ_NPME01000004.1 Protein Homology CDS 426147 426401 . + 0 ID=cds-WP_000511320.1;Parent=gene-CCO35_RS16300;Dbxref=GenBank:WP_000511320.1;Name=WP_000511320.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=CCO35_RS16300;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511320.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 426464 428176 . - . ID=gene-CCO35_RS16305;Name=CCO35_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16305;old_locus_tag=CCO35_16295 NZ_NPME01000004.1 Protein Homology CDS 426464 428176 . - 0 ID=cds-WP_000612835.1;Parent=gene-CCO35_RS16305;Dbxref=GenBank:WP_000612835.1;Name=WP_000612835.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=CCO35_RS16305;product=alpha%2Calpha-trehalase;protein_id=WP_000612835.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 428390 429664 . - . ID=gene-CCO35_RS16310;Name=CCO35_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16310;old_locus_tag=CCO35_16300 NZ_NPME01000004.1 Protein Homology CDS 428390 429664 . - 0 ID=cds-WP_001519734.1;Parent=gene-CCO35_RS16310;Dbxref=GenBank:WP_001519734.1;Name=WP_001519734.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=CCO35_RS16310;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001519734.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 430059 430148 . - . ID=gene-CCO35_RS16315;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=CCO35_RS16315;old_locus_tag=CCO35_16305 NZ_NPME01000004.1 Protein Homology CDS 430059 430148 . - 0 ID=cds-WP_000270306.1;Parent=gene-CCO35_RS16315;Dbxref=GenBank:WP_000270306.1;Name=WP_000270306.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=CCO35_RS16315;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270306.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 430161 431297 . - . ID=gene-CCO35_RS16320;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=CCO35_RS16320;old_locus_tag=CCO35_16310 NZ_NPME01000004.1 Protein Homology CDS 430161 431297 . - 0 ID=cds-WP_000888110.1;Parent=gene-CCO35_RS16320;Dbxref=GenBank:WP_000888110.1;Name=WP_000888110.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=CCO35_RS16320;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888110.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 431309 432853 . - . ID=gene-CCO35_RS16325;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=CCO35_RS16325;old_locus_tag=CCO35_16315 NZ_NPME01000004.1 Protein Homology CDS 431309 432853 . - 0 ID=cds-WP_000263601.1;Parent=gene-CCO35_RS16325;Dbxref=GenBank:WP_000263601.1;Name=WP_000263601.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=CCO35_RS16325;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263601.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 432928 433776 . - . ID=gene-CCO35_RS16330;Name=CCO35_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16330;old_locus_tag=CCO35_16320 NZ_NPME01000004.1 Protein Homology CDS 432928 433776 . - 0 ID=cds-WP_000063367.1;Parent=gene-CCO35_RS16330;Dbxref=GenBank:WP_000063367.1;Name=WP_000063367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=CCO35_RS16330;product=hydrogenase expression/formation protein;protein_id=WP_000063367.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 433773 434177 . - . ID=gene-CCO35_RS16335;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=CCO35_RS16335;old_locus_tag=CCO35_16325 NZ_NPME01000004.1 Protein Homology CDS 433773 434177 . - 0 ID=cds-WP_001262570.1;Parent=gene-CCO35_RS16335;Dbxref=GenBank:WP_001262570.1;Name=WP_001262570.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=CCO35_RS16335;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262570.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 434167 434763 . - . ID=gene-CCO35_RS16340;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=CCO35_RS16340;old_locus_tag=CCO35_16330 NZ_NPME01000004.1 Protein Homology CDS 434167 434763 . - 0 ID=cds-WP_000993804.1;Parent=gene-CCO35_RS16340;Dbxref=GenBank:WP_000993804.1;Name=WP_000993804.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=CCO35_RS16340;product=hydrogenase 1 maturation protease;protein_id=WP_000993804.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 434760 435491 . - . ID=gene-CCO35_RS16345;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=CCO35_RS16345;old_locus_tag=CCO35_16335 NZ_NPME01000004.1 Protein Homology CDS 434760 435491 . - 0 ID=cds-WP_000147038.1;Parent=gene-CCO35_RS16345;Dbxref=GenBank:WP_000147038.1;Name=WP_000147038.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=CCO35_RS16345;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147038.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 435510 437303 . - . ID=gene-CCO35_RS16350;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=CCO35_RS16350;old_locus_tag=CCO35_16340 NZ_NPME01000004.1 Protein Homology CDS 435510 437303 . - 0 ID=cds-WP_000070982.1;Parent=gene-CCO35_RS16350;Dbxref=GenBank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=CCO35_RS16350;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 437300 438418 . - . ID=gene-CCO35_RS16355;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=CCO35_RS16355;old_locus_tag=CCO35_16345 NZ_NPME01000004.1 Protein Homology CDS 437300 438418 . - 0 ID=cds-WP_001058312.1;Parent=gene-CCO35_RS16355;Dbxref=GenBank:WP_001058312.1;Name=WP_001058312.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=CCO35_RS16355;product=hydrogenase 1 small subunit;protein_id=WP_001058312.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 438912 440177 . + . ID=gene-CCO35_RS16360;Name=CCO35_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16360;old_locus_tag=CCO35_16350 NZ_NPME01000004.1 Protein Homology CDS 438912 440177 . + 0 ID=cds-WP_000794374.1;Parent=gene-CCO35_RS16360;Dbxref=GenBank:WP_000794374.1;Name=WP_000794374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=CCO35_RS16360;product=DUF4427 domain-containing protein;protein_id=WP_000794374.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 440336 441427 . - . ID=gene-CCO35_RS16365;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CCO35_RS16365;old_locus_tag=CCO35_16355 NZ_NPME01000004.1 Protein Homology CDS 440336 441427 . - 0 ID=cds-WP_000505850.1;Parent=gene-CCO35_RS16365;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=CCO35_RS16365;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 441544 442128 . - . ID=gene-CCO35_RS16370;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CCO35_RS16370;old_locus_tag=CCO35_16360 NZ_NPME01000004.1 Protein Homology CDS 441544 442128 . - 0 ID=cds-WP_000985595.1;Parent=gene-CCO35_RS16370;Dbxref=GenBank:WP_000985595.1;Name=WP_000985595.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=CCO35_RS16370;product=aminoacyl-tRNA hydrolase;protein_id=WP_000985595.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 442404 442682 . + . ID=gene-CCO35_RS16375;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=CCO35_RS16375;old_locus_tag=CCO35_16365 NZ_NPME01000004.1 Protein Homology CDS 442404 442682 . + 0 ID=cds-WP_000823878.1;Parent=gene-CCO35_RS16375;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=CCO35_RS16375;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 442727 444412 . - . ID=gene-CCO35_RS16380;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=CCO35_RS16380;old_locus_tag=CCO35_16370 NZ_NPME01000004.1 Protein Homology CDS 442727 444412 . - 0 ID=cds-WP_001037186.1;Parent=gene-CCO35_RS16380;Dbxref=GenBank:WP_001037186.1;Name=WP_001037186.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=CCO35_RS16380;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037186.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 444537 445484 . - . ID=gene-CCO35_RS16385;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=CCO35_RS16385;old_locus_tag=CCO35_16375 NZ_NPME01000004.1 Protein Homology CDS 444537 445484 . - 0 ID=cds-WP_001518537.1;Parent=gene-CCO35_RS16385;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=CCO35_RS16385;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 445750 446601 . - . ID=gene-CCO35_RS16390;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CCO35_RS16390;old_locus_tag=CCO35_16380 NZ_NPME01000004.1 Protein Homology CDS 445750 446601 . - 0 ID=cds-WP_023245082.1;Parent=gene-CCO35_RS16390;Dbxref=GenBank:WP_023245082.1;Name=WP_023245082.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=CCO35_RS16390;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_023245082.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 446598 447221 . - . ID=gene-CCO35_RS16395;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=CCO35_RS16395;old_locus_tag=CCO35_16385 NZ_NPME01000004.1 Protein Homology CDS 446598 447221 . - 0 ID=cds-WP_000174484.1;Parent=gene-CCO35_RS16395;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=CCO35_RS16395;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 447535 448791 . + . ID=gene-CCO35_RS16400;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CCO35_RS16400;old_locus_tag=CCO35_16390 NZ_NPME01000004.1 Protein Homology CDS 447535 448791 . + 0 ID=cds-WP_031568285.1;Parent=gene-CCO35_RS16400;Dbxref=GenBank:WP_031568285.1;Name=WP_031568285.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=CCO35_RS16400;product=glutamyl-tRNA reductase;protein_id=WP_031568285.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 448832 449914 . + . ID=gene-CCO35_RS16405;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CCO35_RS16405;old_locus_tag=CCO35_16395 NZ_NPME01000004.1 Protein Homology CDS 448832 449914 . + 0 ID=cds-WP_000804708.1;Parent=gene-CCO35_RS16405;Dbxref=GenBank:WP_000804708.1;Name=WP_000804708.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=CCO35_RS16405;product=peptide chain release factor 1;protein_id=WP_000804708.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 449914 450747 . + . ID=gene-CCO35_RS16410;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CCO35_RS16410;old_locus_tag=CCO35_16400 NZ_NPME01000004.1 Protein Homology CDS 449914 450747 . + 0 ID=cds-WP_031568287.1;Parent=gene-CCO35_RS16410;Dbxref=GenBank:WP_031568287.1;Name=WP_031568287.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=CCO35_RS16410;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_031568287.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 450744 451133 . + . ID=gene-CCO35_RS16415;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=CCO35_RS16415;old_locus_tag=CCO35_16405 NZ_NPME01000004.1 Protein Homology CDS 450744 451133 . + 0 ID=cds-WP_000150667.1;Parent=gene-CCO35_RS16415;Dbxref=GenBank:WP_000150667.1;Name=WP_000150667.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=CCO35_RS16415;product=invasion regulator SirB2;protein_id=WP_000150667.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 451137 451946 . + . ID=gene-CCO35_RS16420;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=CCO35_RS16420;old_locus_tag=CCO35_16410 NZ_NPME01000004.1 Protein Homology CDS 451137 451946 . + 0 ID=cds-WP_001257065.1;Parent=gene-CCO35_RS16420;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=CCO35_RS16420;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 451984 452838 . + . ID=gene-CCO35_RS16425;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=CCO35_RS16425;old_locus_tag=CCO35_16415 NZ_NPME01000004.1 Protein Homology CDS 451984 452838 . + 0 ID=cds-WP_000811046.1;Parent=gene-CCO35_RS16425;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=CCO35_RS16425;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 452891 453991 . - . ID=gene-CCO35_RS16430;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=CCO35_RS16430;old_locus_tag=CCO35_16420 NZ_NPME01000004.1 Protein Homology CDS 452891 453991 . - 0 ID=cds-WP_000148418.1;Parent=gene-CCO35_RS16430;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=CCO35_RS16430;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 454258 454488 . + . ID=gene-CCO35_RS16435;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=CCO35_RS16435;old_locus_tag=CCO35_16425 NZ_NPME01000004.1 Protein Homology CDS 454258 454488 . + 0 ID=cds-WP_001146392.1;Parent=gene-CCO35_RS16435;Dbxref=GenBank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=CCO35_RS16435;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 454568 454921 . - . ID=gene-CCO35_RS16440;Name=CCO35_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16440;old_locus_tag=CCO35_16430 NZ_NPME01000004.1 Protein Homology CDS 454568 454921 . - 0 ID=cds-WP_001179794.1;Parent=gene-CCO35_RS16440;Dbxref=GenBank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=CCO35_RS16440;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179794.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 455098 456522 . + . ID=gene-CCO35_RS16445;Name=CCO35_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16445;old_locus_tag=CCO35_16435 NZ_NPME01000004.1 Protein Homology CDS 455098 456522 . + 0 ID=cds-WP_001116357.1;Parent=gene-CCO35_RS16445;Dbxref=GenBank:WP_001116357.1;Name=WP_001116357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=CCO35_RS16445;product=YchO/YchP family invasin;protein_id=WP_001116357.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 456523 457173 . - . ID=gene-CCO35_RS16450;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=CCO35_RS16450;old_locus_tag=CCO35_16440 NZ_NPME01000004.1 Protein Homology CDS 456523 457173 . - 0 ID=cds-WP_001064598.1;Parent=gene-CCO35_RS16450;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=CCO35_RS16450;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 457166 458962 . - . ID=gene-CCO35_RS16455;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=CCO35_RS16455;old_locus_tag=CCO35_16445 NZ_NPME01000004.1 Protein Homology CDS 457166 458962 . - 0 ID=cds-WP_023212654.1;Parent=gene-CCO35_RS16455;Dbxref=GenBank:WP_023212654.1;Name=WP_023212654.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=CCO35_RS16455;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_023212654.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 459303 460700 . + . ID=gene-CCO35_RS16465;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=CCO35_RS16465;old_locus_tag=CCO35_16455 NZ_NPME01000004.1 Protein Homology CDS 459303 460700 . + 0 ID=cds-WP_000019848.1;Parent=gene-CCO35_RS16465;Dbxref=GenBank:WP_000019848.1;Name=WP_000019848.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=CCO35_RS16465;product=nitrate transporter NarK;protein_id=WP_000019848.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 461088 464831 . + . ID=gene-CCO35_RS16470;Name=CCO35_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16470;old_locus_tag=CCO35_16460 NZ_NPME01000004.1 Protein Homology CDS 461088 464831 . + 0 ID=cds-WP_031568294.1;Parent=gene-CCO35_RS16470;Dbxref=GenBank:WP_031568294.1;Name=WP_031568294.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=CCO35_RS16470;product=nitrate reductase subunit alpha;protein_id=WP_031568294.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 464828 466363 . + . ID=gene-CCO35_RS16475;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO35_RS16475;old_locus_tag=CCO35_16465 NZ_NPME01000004.1 Protein Homology CDS 464828 466363 . + 0 ID=cds-WP_031568295.1;Parent=gene-CCO35_RS16475;Dbxref=GenBank:WP_031568295.1;Name=WP_031568295.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=CCO35_RS16475;product=nitrate reductase subunit beta;protein_id=WP_031568295.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 466360 467070 . + . ID=gene-CCO35_RS16480;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=CCO35_RS16480;old_locus_tag=CCO35_16470 NZ_NPME01000004.1 Protein Homology CDS 466360 467070 . + 0 ID=cds-WP_031568297.1;Parent=gene-CCO35_RS16480;Dbxref=GenBank:WP_031568297.1;Name=WP_031568297.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=CCO35_RS16480;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_031568297.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 467070 467747 . + . ID=gene-CCO35_RS16485;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO35_RS16485;old_locus_tag=CCO35_16475 NZ_NPME01000004.1 Protein Homology CDS 467070 467747 . + 0 ID=cds-WP_000545594.1;Parent=gene-CCO35_RS16485;Dbxref=GenBank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=CCO35_RS16485;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 467958 468089 . - . ID=gene-CCO35_RS16490;Name=CCO35_RS16490;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO35_RS16490;old_locus_tag=CCO35_16480 NZ_NPME01000004.1 cmsearch ncRNA 467958 468089 . - . ID=rna-CCO35_RS16490;Parent=gene-CCO35_RS16490;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS16490;product=RtT sRNA NZ_NPME01000004.1 cmsearch exon 467958 468089 . - . ID=exon-CCO35_RS16490-1;Parent=rna-CCO35_RS16490;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS16490;product=RtT sRNA NZ_NPME01000004.1 RefSeq gene 468134 468218 . - . ID=gene-CCO35_RS16495;Name=CCO35_RS16495;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS16495;old_locus_tag=CCO35_16485 NZ_NPME01000004.1 tRNAscan-SE tRNA 468134 468218 . - . ID=rna-CCO35_RS16495;Parent=gene-CCO35_RS16495;anticodon=(pos:complement(468182..468184));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS16495;product=tRNA-Tyr NZ_NPME01000004.1 tRNAscan-SE exon 468134 468218 . - . ID=exon-CCO35_RS16495-1;Parent=rna-CCO35_RS16495;anticodon=(pos:complement(468182..468184));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS16495;product=tRNA-Tyr NZ_NPME01000004.1 RefSeq gene 468253 468384 . - . ID=gene-CCO35_RS16500;Name=CCO35_RS16500;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO35_RS16500;old_locus_tag=CCO35_16490 NZ_NPME01000004.1 cmsearch ncRNA 468253 468384 . - . ID=rna-CCO35_RS16500;Parent=gene-CCO35_RS16500;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS16500;product=RtT sRNA NZ_NPME01000004.1 cmsearch exon 468253 468384 . - . ID=exon-CCO35_RS16500-1;Parent=rna-CCO35_RS16500;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS16500;product=RtT sRNA NZ_NPME01000004.1 RefSeq gene 468429 468513 . - . ID=gene-CCO35_RS16505;Name=CCO35_RS16505;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS16505;old_locus_tag=CCO35_16495 NZ_NPME01000004.1 tRNAscan-SE tRNA 468429 468513 . - . ID=rna-CCO35_RS16505;Parent=gene-CCO35_RS16505;anticodon=(pos:complement(468477..468479));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS16505;product=tRNA-Tyr NZ_NPME01000004.1 tRNAscan-SE exon 468429 468513 . - . ID=exon-CCO35_RS16505-1;Parent=rna-CCO35_RS16505;anticodon=(pos:complement(468477..468479));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS16505;product=tRNA-Tyr NZ_NPME01000004.1 RefSeq gene 468672 469514 . - . ID=gene-CCO35_RS16510;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=CCO35_RS16510;old_locus_tag=CCO35_16500 NZ_NPME01000004.1 Protein Homology CDS 468672 469514 . - 0 ID=cds-WP_001191156.1;Parent=gene-CCO35_RS16510;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=CCO35_RS16510;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 469565 470023 . - . ID=gene-CCO35_RS16515;Name=CCO35_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16515;old_locus_tag=CCO35_16505 NZ_NPME01000004.1 Protein Homology CDS 469565 470023 . - 0 ID=cds-WP_094965365.1;Parent=gene-CCO35_RS16515;Dbxref=GenBank:WP_094965365.1;Name=WP_094965365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=CCO35_RS16515;product=YchJ family protein;protein_id=WP_094965365.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 470134 471039 . + . ID=gene-CCO35_RS16520;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=CCO35_RS16520;old_locus_tag=CCO35_16510 NZ_NPME01000004.1 Protein Homology CDS 470134 471039 . + 0 ID=cds-WP_001230574.1;Parent=gene-CCO35_RS16520;Dbxref=GenBank:WP_001230574.1;Name=WP_001230574.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=CCO35_RS16520;product=patatin-like phospholipase RssA;protein_id=WP_001230574.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 471130 472143 . + . ID=gene-CCO35_RS16525;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=CCO35_RS16525;old_locus_tag=CCO35_16515 NZ_NPME01000004.1 Protein Homology CDS 471130 472143 . + 0 ID=cds-WP_000193432.1;Parent=gene-CCO35_RS16525;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=CCO35_RS16525;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 472346 473254 . + . ID=gene-CCO35_RS16530;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CCO35_RS16530;old_locus_tag=CCO35_16520 NZ_NPME01000004.1 Protein Homology CDS 472346 473254 . + 0 ID=cds-WP_000729450.1;Parent=gene-CCO35_RS16530;Dbxref=GenBank:WP_000729450.1;Name=WP_000729450.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=CCO35_RS16530;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729450.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 473386 473799 . - . ID=gene-CCO35_RS16535;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=CCO35_RS16535;old_locus_tag=CCO35_16525 NZ_NPME01000004.1 Protein Homology CDS 473386 473799 . - 0 ID=cds-WP_001287383.1;Parent=gene-CCO35_RS16535;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=CCO35_RS16535;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 474462 475079 . + . ID=gene-CCO35_RS16540;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=CCO35_RS16540;old_locus_tag=CCO35_16530 NZ_NPME01000004.1 Protein Homology CDS 474462 475079 . + 0 ID=cds-WP_000068097.1;Parent=gene-CCO35_RS16540;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=CCO35_RS16540;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 475274 477952 . - . ID=gene-CCO35_RS16545;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=CCO35_RS16545;old_locus_tag=CCO35_16535 NZ_NPME01000004.1 Protein Homology CDS 475274 477952 . - 0 ID=cds-WP_000301678.1;Parent=gene-CCO35_RS16545;Dbxref=GenBank:WP_000301678.1;Name=WP_000301678.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=CCO35_RS16545;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301678.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 478429 479076 . + . ID=gene-CCO35_RS16550;Name=CCO35_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16550;old_locus_tag=CCO35_16540 NZ_NPME01000004.1 Protein Homology CDS 478429 479076 . + 0 ID=cds-WP_000615840.1;Parent=gene-CCO35_RS16550;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=CCO35_RS16550;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 479841 481472 . + . ID=gene-CCO35_RS16560;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=CCO35_RS16560;old_locus_tag=CCO35_16550 NZ_NPME01000004.1 Protein Homology CDS 479841 481472 . + 0 ID=cds-WP_001521098.1;Parent=gene-CCO35_RS16560;Dbxref=GenBank:WP_001521098.1;Name=WP_001521098.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=CCO35_RS16560;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001521098.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 481595 482515 . + . ID=gene-CCO35_RS16565;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=CCO35_RS16565;old_locus_tag=CCO35_16555 NZ_NPME01000004.1 Protein Homology CDS 481595 482515 . + 0 ID=cds-WP_000911097.1;Parent=gene-CCO35_RS16565;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=CCO35_RS16565;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 482530 483438 . + . ID=gene-CCO35_RS16570;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=CCO35_RS16570;old_locus_tag=CCO35_16560 NZ_NPME01000004.1 Protein Homology CDS 482530 483438 . + 0 ID=cds-WP_000979653.1;Parent=gene-CCO35_RS16570;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=CCO35_RS16570;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 483450 484457 . + . ID=gene-CCO35_RS16575;Name=CCO35_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16575;old_locus_tag=CCO35_16565 NZ_NPME01000004.1 Protein Homology CDS 483450 484457 . + 0 ID=cds-WP_000058857.1;Parent=gene-CCO35_RS16575;Dbxref=GenBank:WP_000058857.1;Name=WP_000058857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=CCO35_RS16575;product=ABC transporter ATP-binding protein;protein_id=WP_000058857.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 484454 485458 . + . ID=gene-CCO35_RS16580;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=CCO35_RS16580;old_locus_tag=CCO35_16570 NZ_NPME01000004.1 Protein Homology CDS 484454 485458 . + 0 ID=cds-WP_000994697.1;Parent=gene-CCO35_RS16580;Dbxref=GenBank:WP_000994697.1;Name=WP_000994697.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=CCO35_RS16580;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994697.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 485506 486342 . + . ID=gene-CCO35_RS16585;Name=CCO35_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16585;old_locus_tag=CCO35_16575 NZ_NPME01000004.1 Protein Homology CDS 485506 486342 . + 0 ID=cds-WP_000059074.1;Parent=gene-CCO35_RS16585;Dbxref=GenBank:WP_000059074.1;Name=WP_000059074.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=CCO35_RS16585;product=ion transporter;protein_id=WP_000059074.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 486390 486719 . - . ID=gene-CCO35_RS16590;Name=CCO35_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16590;old_locus_tag=CCO35_16580 NZ_NPME01000004.1 Protein Homology CDS 486390 486719 . - 0 ID=cds-WP_000425070.1;Parent=gene-CCO35_RS16590;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=CCO35_RS16590;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 486753 488213 . - . ID=gene-CCO35_RS16595;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CCO35_RS16595;old_locus_tag=CCO35_16585 NZ_NPME01000004.1 Protein Homology CDS 486753 488213 . - 0 ID=cds-WP_000206886.1;Parent=gene-CCO35_RS16595;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=CCO35_RS16595;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 488356 488529 . + . ID=gene-CCO35_RS16600;Name=CCO35_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16600;old_locus_tag=CCO35_16590 NZ_NPME01000004.1 Protein Homology CDS 488356 488529 . + 0 ID=cds-WP_001531561.1;Parent=gene-CCO35_RS16600;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=CCO35_RS16600;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 488573 488869 . - . ID=gene-CCO35_RS16605;Name=CCO35_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16605;old_locus_tag=CCO35_16595 NZ_NPME01000004.1 Protein Homology CDS 488573 488869 . - 0 ID=cds-WP_000967605.1;Parent=gene-CCO35_RS16605;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=CCO35_RS16605;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 489093 489821 . + . ID=gene-CCO35_RS16610;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=CCO35_RS16610;old_locus_tag=CCO35_16600 NZ_NPME01000004.1 Protein Homology CDS 489093 489821 . + 0 ID=cds-WP_094965367.1;Parent=gene-CCO35_RS16610;Dbxref=GenBank:WP_094965367.1;Name=WP_094965367.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=CCO35_RS16610;product=TonB system transport protein TonB;protein_id=WP_094965367.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 489881 490282 . - . ID=gene-CCO35_RS16615;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=CCO35_RS16615;old_locus_tag=CCO35_16605 NZ_NPME01000004.1 Protein Homology CDS 489881 490282 . - 0 ID=cds-WP_000210317.1;Parent=gene-CCO35_RS16615;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=CCO35_RS16615;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 490443 490982 . - . ID=gene-CCO35_RS16620;Name=CCO35_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16620;old_locus_tag=CCO35_16610 NZ_NPME01000004.1 Protein Homology CDS 490443 490982 . - 0 ID=cds-WP_000808683.1;Parent=gene-CCO35_RS16620;Dbxref=GenBank:WP_000808683.1;Name=WP_000808683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=CCO35_RS16620;product=septation protein A;protein_id=WP_000808683.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 491039 491782 . - . ID=gene-CCO35_RS16625;Name=CCO35_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16625;old_locus_tag=CCO35_16615 NZ_NPME01000004.1 Protein Homology CDS 491039 491782 . - 0 ID=cds-WP_000028507.1;Parent=gene-CCO35_RS16625;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=CCO35_RS16625;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 491808 492212 . - . ID=gene-CCO35_RS16630;Name=CCO35_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16630;old_locus_tag=CCO35_16620 NZ_NPME01000004.1 Protein Homology CDS 491808 492212 . - 0 ID=cds-WP_000114955.1;Parent=gene-CCO35_RS16630;Dbxref=GenBank:WP_000114955.1;Name=WP_000114955.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=CCO35_RS16630;product=YkgJ family cysteine cluster protein;protein_id=WP_000114955.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 492549 493187 . + . ID=gene-CCO35_RS16635;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=CCO35_RS16635;old_locus_tag=CCO35_16625 NZ_NPME01000004.1 Protein Homology CDS 492549 493187 . + 0 ID=cds-WP_000714802.1;Parent=gene-CCO35_RS16635;Dbxref=GenBank:WP_000714802.1;Name=WP_000714802.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=CCO35_RS16635;product=outer membrane protein OmpW;protein_id=WP_000714802.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 493269 494147 . - . ID=gene-CCO35_RS16640;Name=CCO35_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16640;old_locus_tag=CCO35_16630 NZ_NPME01000004.1 Protein Homology CDS 493269 494147 . - 0 ID=cds-WP_000488353.1;Parent=gene-CCO35_RS16640;Dbxref=GenBank:WP_000488353.1;Name=WP_000488353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=CCO35_RS16640;product=manganese catalase family protein;protein_id=WP_000488353.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 494167 494673 . - . ID=gene-CCO35_RS16645;Name=CCO35_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16645;old_locus_tag=CCO35_16635 NZ_NPME01000004.1 Protein Homology CDS 494167 494673 . - 0 ID=cds-WP_001109977.1;Parent=gene-CCO35_RS16645;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=CCO35_RS16645;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 494747 495250 . - . ID=gene-CCO35_RS16650;Name=CCO35_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16650;old_locus_tag=CCO35_16640 NZ_NPME01000004.1 Protein Homology CDS 494747 495250 . - 0 ID=cds-WP_001022826.1;Parent=gene-CCO35_RS16650;Dbxref=GenBank:WP_001022826.1;Name=WP_001022826.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=CCO35_RS16650;product=ferritin-like domain-containing protein;protein_id=WP_001022826.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 495340 495522 . - . ID=gene-CCO35_RS16655;Name=CCO35_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16655;old_locus_tag=CCO35_16645 NZ_NPME01000004.1 Protein Homology CDS 495340 495522 . - 0 ID=cds-WP_000807657.1;Parent=gene-CCO35_RS16655;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=CCO35_RS16655;product=general stress protein;protein_id=WP_000807657.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 496001 496807 . - . ID=gene-CCO35_RS16660;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CCO35_RS16660;old_locus_tag=CCO35_16650 NZ_NPME01000004.1 Protein Homology CDS 496001 496807 . - 0 ID=cds-WP_000443032.1;Parent=gene-CCO35_RS16660;Dbxref=GenBank:WP_000443032.1;Name=WP_000443032.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=CCO35_RS16660;product=tryptophan synthase subunit alpha;protein_id=WP_000443032.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 496807 498000 . - . ID=gene-CCO35_RS16665;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CCO35_RS16665;old_locus_tag=CCO35_16655 NZ_NPME01000004.1 Protein Homology CDS 496807 498000 . - 0 ID=cds-WP_000209485.1;Parent=gene-CCO35_RS16665;Dbxref=GenBank:WP_000209485.1;Name=WP_000209485.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=CCO35_RS16665;product=tryptophan synthase subunit beta;protein_id=WP_000209485.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 498010 499368 . - . ID=gene-CCO35_RS16670;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=CCO35_RS16670;old_locus_tag=CCO35_16660 NZ_NPME01000004.1 Protein Homology CDS 498010 499368 . - 0 ID=cds-WP_001195292.1;Parent=gene-CCO35_RS16670;Dbxref=GenBank:WP_001195292.1;Name=WP_001195292.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=CCO35_RS16670;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_001195292.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 499372 500967 . - . ID=gene-CCO35_RS16675;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CCO35_RS16675;old_locus_tag=CCO35_16665 NZ_NPME01000004.1 Protein Homology CDS 499372 500967 . - 0 ID=cds-WP_000763497.1;Parent=gene-CCO35_RS16675;Dbxref=GenBank:WP_000763497.1;Name=WP_000763497.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=CCO35_RS16675;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763497.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 500967 502529 . - . ID=gene-CCO35_RS16680;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=CCO35_RS16680;old_locus_tag=CCO35_16670 NZ_NPME01000004.1 Protein Homology CDS 500967 502529 . - 0 ID=cds-WP_001194377.1;Parent=gene-CCO35_RS16680;Dbxref=GenBank:WP_001194377.1;Name=WP_001194377.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=CCO35_RS16680;product=anthranilate synthase component I;protein_id=WP_001194377.1;transl_table=11 NZ_NPME01000004.1 cmsearch sequence_feature 502552 502647 . - . ID=id-NZ_NPME01000004.1:502552..502647;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPME01000004.1 RefSeq gene 502624 502668 . - . ID=gene-CCO35_RS16685;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=CCO35_RS16685;old_locus_tag=CCO35_16675 NZ_NPME01000004.1 Protein Homology CDS 502624 502668 . - 0 ID=cds-WP_010989026.1;Parent=gene-CCO35_RS16685;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=CCO35_RS16685;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 502790 503671 . + . ID=gene-CCO35_RS16690;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=CCO35_RS16690;old_locus_tag=CCO35_16680 NZ_NPME01000004.1 Protein Homology CDS 502790 503671 . + 0 ID=cds-WP_000500452.1;Parent=gene-CCO35_RS16690;Dbxref=GenBank:WP_000500452.1;Name=WP_000500452.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=CCO35_RS16690;product=RNase RNM;protein_id=WP_000500452.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 503679 504299 . + . ID=gene-CCO35_RS16695;Name=CCO35_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16695;old_locus_tag=CCO35_16685 NZ_NPME01000004.1 Protein Homology CDS 503679 504299 . + 0 ID=cds-WP_000077250.1;Parent=gene-CCO35_RS16695;Dbxref=GenBank:WP_000077250.1;Name=WP_000077250.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=CCO35_RS16695;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077250.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 504400 505275 . + . ID=gene-CCO35_RS16700;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=CCO35_RS16700;old_locus_tag=CCO35_16690 NZ_NPME01000004.1 Protein Homology CDS 504400 505275 . + 0 ID=cds-WP_001291233.1;Parent=gene-CCO35_RS16700;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=CCO35_RS16700;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 505362 505952 . - . ID=gene-CCO35_RS16705;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=CCO35_RS16705;old_locus_tag=CCO35_16695 NZ_NPME01000004.1 Protein Homology CDS 505362 505952 . - 0 ID=cds-WP_001278865.1;Parent=gene-CCO35_RS16705;Dbxref=GenBank:WP_001278865.1;Name=WP_001278865.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=CCO35_RS16705;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278865.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 505949 506710 . - . ID=gene-CCO35_RS16710;Name=CCO35_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16710;old_locus_tag=CCO35_16700 NZ_NPME01000004.1 Protein Homology CDS 505949 506710 . - 0 ID=cds-WP_000559313.1;Parent=gene-CCO35_RS16710;Dbxref=GenBank:WP_000559313.1;Name=WP_000559313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=CCO35_RS16710;product=YciK family oxidoreductase;protein_id=WP_000559313.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 506948 507994 . + . ID=gene-CCO35_RS16715;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=CCO35_RS16715;old_locus_tag=CCO35_16705 NZ_NPME01000004.1 Protein Homology CDS 506948 507994 . + 0 ID=cds-WP_000422082.1;Parent=gene-CCO35_RS16715;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=CCO35_RS16715;product=protease SohB;protein_id=WP_000422082.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 508036 508287 . - . ID=gene-CCO35_RS16720;Name=CCO35_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16720;old_locus_tag=CCO35_16710 NZ_NPME01000004.1 Protein Homology CDS 508036 508287 . - 0 ID=cds-WP_000548616.1;Parent=gene-CCO35_RS16720;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=CCO35_RS16720;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 508690 511287 . + . ID=gene-CCO35_RS16730;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CCO35_RS16730;old_locus_tag=CCO35_16720 NZ_NPME01000004.1 Protein Homology CDS 508690 511287 . + 0 ID=cds-WP_000513594.1;Parent=gene-CCO35_RS16730;Dbxref=GenBank:WP_000513594.1;Name=WP_000513594.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=CCO35_RS16730;product=type I DNA topoisomerase;protein_id=WP_000513594.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 511691 512665 . + . ID=gene-CCO35_RS16740;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=CCO35_RS16740;old_locus_tag=CCO35_16730 NZ_NPME01000004.1 Protein Homology CDS 511691 512665 . + 0 ID=cds-WP_000776232.1;Parent=gene-CCO35_RS16740;Dbxref=GenBank:WP_000776232.1;Name=WP_000776232.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=CCO35_RS16740;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776232.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 512946 513086 . + . ID=gene-CCO35_RS16745;Name=CCO35_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16745;old_locus_tag=CCO35_16735 NZ_NPME01000004.1 Protein Homology CDS 512946 513086 . + 0 ID=cds-WP_213083417.1;Parent=gene-CCO35_RS16745;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=CCO35_RS16745;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 513087 513257 . + . ID=gene-CCO35_RS16750;Name=CCO35_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16750;old_locus_tag=CCO35_16740 NZ_NPME01000004.1 Protein Homology CDS 513087 513257 . + 0 ID=cds-WP_000029025.1;Parent=gene-CCO35_RS16750;Dbxref=GenBank:WP_000029025.1;Name=WP_000029025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=CCO35_RS16750;product=hypothetical protein;protein_id=WP_000029025.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 513367 513459 . + . ID=gene-CCO35_RS24125;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=CCO35_RS24125 NZ_NPME01000004.1 Protein Homology CDS 513367 513459 . + 0 ID=cds-WP_223148964.1;Parent=gene-CCO35_RS24125;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=CCO35_RS24125;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 513642 516317 . + . ID=gene-CCO35_RS16760;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CCO35_RS16760;old_locus_tag=CCO35_16750 NZ_NPME01000004.1 Protein Homology CDS 513642 516317 . + 0 ID=cds-WP_000099470.1;Parent=gene-CCO35_RS16760;Dbxref=GenBank:WP_000099470.1;Name=WP_000099470.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=CCO35_RS16760;product=aconitate hydratase AcnA;protein_id=WP_000099470.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 516373 516963 . - . ID=gene-CCO35_RS16765;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=CCO35_RS16765;old_locus_tag=CCO35_16755 NZ_NPME01000004.1 Protein Homology CDS 516373 516963 . - 0 ID=cds-WP_001176284.1;Parent=gene-CCO35_RS16765;Dbxref=GenBank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=CCO35_RS16765;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 517159 517923 . + . ID=gene-CCO35_RS16770;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=CCO35_RS16770;old_locus_tag=CCO35_16760 NZ_NPME01000004.1 Protein Homology CDS 517159 517923 . + 0 ID=cds-WP_000948636.1;Parent=gene-CCO35_RS16770;Dbxref=GenBank:WP_000948636.1;Name=WP_000948636.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=CCO35_RS16770;product=phosphatidylglycerophosphatase B;protein_id=WP_000948636.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 518073 518381 . + . ID=gene-CCO35_RS16780;Name=CCO35_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16780;old_locus_tag=CCO35_16770 NZ_NPME01000004.1 Protein Homology CDS 518073 518381 . + 0 ID=cds-WP_000876305.1;Parent=gene-CCO35_RS16780;Dbxref=GenBank:WP_000876305.1;Name=WP_000876305.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=CCO35_RS16780;product=LapA family protein;protein_id=WP_000876305.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 518388 519557 . + . ID=gene-CCO35_RS16785;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=CCO35_RS16785;old_locus_tag=CCO35_16775 NZ_NPME01000004.1 Protein Homology CDS 518388 519557 . + 0 ID=cds-WP_000891378.1;Parent=gene-CCO35_RS16785;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=CCO35_RS16785;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 519748 520485 . + . ID=gene-CCO35_RS16790;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CCO35_RS16790;old_locus_tag=CCO35_16780 NZ_NPME01000004.1 Protein Homology CDS 519748 520485 . + 0 ID=cds-WP_001551811.1;Parent=gene-CCO35_RS16790;Dbxref=GenBank:WP_001551811.1;Name=WP_001551811.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=CCO35_RS16790;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_001551811.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 520485 520811 . + . ID=gene-CCO35_RS16795;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=CCO35_RS16795;old_locus_tag=CCO35_16785 NZ_NPME01000004.1 Protein Homology CDS 520485 520811 . + 0 ID=cds-WP_001285199.1;Parent=gene-CCO35_RS16795;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=CCO35_RS16795;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 520931 521149 . - . ID=gene-CCO35_RS16800;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=CCO35_RS16800;old_locus_tag=CCO35_16790 NZ_NPME01000004.1 Protein Homology CDS 520931 521149 . - 0 ID=cds-WP_000481166.1;Parent=gene-CCO35_RS16800;Dbxref=GenBank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=CCO35_RS16800;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 521408 522160 . - . ID=gene-CCO35_RS16805;Name=CCO35_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16805;old_locus_tag=CCO35_16795 NZ_NPME01000004.1 Protein Homology CDS 521408 522160 . - 0 ID=cds-WP_001088593.1;Parent=gene-CCO35_RS16805;Dbxref=GenBank:WP_001088593.1;Name=WP_001088593.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=CCO35_RS16805;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088593.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 522247 522426 . - . ID=gene-CCO35_RS16810;Name=CCO35_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16810;old_locus_tag=CCO35_16800 NZ_NPME01000004.1 Protein Homology CDS 522247 522426 . - 0 ID=cds-WP_001279854.1;Parent=gene-CCO35_RS16810;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=CCO35_RS16810;product=hypothetical protein;protein_id=WP_001279854.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 522548 524530 . - . ID=gene-CCO35_RS16815;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=CCO35_RS16815;old_locus_tag=CCO35_16805 NZ_NPME01000004.1 Protein Homology CDS 522548 524530 . - 0 ID=cds-WP_000977609.1;Parent=gene-CCO35_RS16815;Dbxref=GenBank:WP_000977609.1;Name=WP_000977609.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=CCO35_RS16815;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000977609.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 524792 526726 . - . ID=gene-CCO35_RS16825;Name=CCO35_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16825;old_locus_tag=CCO35_16815 NZ_NPME01000004.1 Protein Homology CDS 524792 526726 . - 0 ID=cds-WP_000485041.1;Parent=gene-CCO35_RS16825;Dbxref=GenBank:WP_000485041.1;Name=WP_000485041.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=CCO35_RS16825;product=exoribonuclease II;protein_id=WP_000485041.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 526971 527948 . - . ID=gene-CCO35_RS16830;Name=CCO35_RS16830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS16830;old_locus_tag=CCO35_16820;partial=true;pseudo=true;start_range=.,526971 NZ_NPME01000004.1 Protein Homology CDS 526971 527948 . - 0 ID=cds-CCO35_RS16830;Parent=gene-CCO35_RS16830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=CCO35_RS16830;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,526971;transl_table=11 NZ_NPME01000004.1 RefSeq gene 528148 528936 . - . ID=gene-CCO35_RS16835;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CCO35_RS16835;old_locus_tag=CCO35_16825 NZ_NPME01000004.1 Protein Homology CDS 528148 528936 . - 0 ID=cds-WP_000506501.1;Parent=gene-CCO35_RS16835;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=CCO35_RS16835;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 529054 529332 . - . ID=gene-CCO35_RS16840;Name=CCO35_RS16840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS16840;old_locus_tag=CCO35_16830;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 529054 529332 . - 0 ID=cds-CCO35_RS16840;Parent=gene-CCO35_RS16840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=CCO35_RS16840;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq gene 529307 529486 . - . ID=gene-CCO35_RS16845;Name=CCO35_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16845;old_locus_tag=CCO35_16835 NZ_NPME01000004.1 Protein Homology CDS 529307 529486 . - 0 ID=cds-WP_031603249.1;Parent=gene-CCO35_RS16845;Dbxref=GenBank:WP_031603249.1;Name=WP_031603249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=CCO35_RS16845;product=hypothetical protein;protein_id=WP_031603249.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 529521 530894 . + . ID=gene-CCO35_RS16850;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=CCO35_RS16850;old_locus_tag=CCO35_16840 NZ_NPME01000004.1 Protein Homology CDS 529521 530894 . + 0 ID=cds-WP_001116920.1;Parent=gene-CCO35_RS16850;Dbxref=GenBank:WP_001116920.1;Name=WP_001116920.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=CCO35_RS16850;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_001116920.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 531360 532067 . + . ID=gene-CCO35_RS16855;Name=CCO35_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16855;old_locus_tag=CCO35_16845 NZ_NPME01000004.1 Protein Homology CDS 531360 532067 . + 0 ID=cds-WP_001268410.1;Parent=gene-CCO35_RS16855;Dbxref=GenBank:WP_001268410.1;Name=WP_001268410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=CCO35_RS16855;product=EAL domain-containing protein;protein_id=WP_001268410.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 532083 532889 . - . ID=gene-CCO35_RS16860;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=CCO35_RS16860;old_locus_tag=CCO35_16850 NZ_NPME01000004.1 Protein Homology CDS 532083 532889 . - 0 ID=cds-WP_000230462.1;Parent=gene-CCO35_RS16860;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=CCO35_RS16860;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 532891 533883 . - . ID=gene-CCO35_RS16865;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=CCO35_RS16865;old_locus_tag=CCO35_16855 NZ_NPME01000004.1 Protein Homology CDS 532891 533883 . - 0 ID=cds-WP_001128869.1;Parent=gene-CCO35_RS16865;Dbxref=GenBank:WP_001128869.1;Name=WP_001128869.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=CCO35_RS16865;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128869.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 533883 534773 . - . ID=gene-CCO35_RS16870;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=CCO35_RS16870;old_locus_tag=CCO35_16860 NZ_NPME01000004.1 Protein Homology CDS 533883 534773 . - 0 ID=cds-WP_001146139.1;Parent=gene-CCO35_RS16870;Dbxref=GenBank:WP_001146139.1;Name=WP_001146139.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=CCO35_RS16870;product=peptide ABC transporter permease SapC;protein_id=WP_001146139.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 534909 535264 . + . ID=gene-CCO35_RS16875;Name=CCO35_RS16875;end_range=535264,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS16875;old_locus_tag=CCO35_16865;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 534909 535264 . + 0 ID=cds-CCO35_RS16875;Parent=gene-CCO35_RS16875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=535264,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542039.1;locus_tag=CCO35_RS16875;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq gene 535264 535437 . - . ID=gene-CCO35_RS23840;Name=CCO35_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23840 NZ_NPME01000004.1 Protein Homology CDS 535264 535437 . - 0 ID=cds-WP_001135892.1;Parent=gene-CCO35_RS23840;Dbxref=GenBank:WP_001135892.1;Name=WP_001135892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135892.1;locus_tag=CCO35_RS23840;product=hypothetical protein;protein_id=WP_001135892.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 535678 536400 . - . ID=gene-CCO35_RS16885;Name=CCO35_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16885;old_locus_tag=CCO35_16875 NZ_NPME01000004.1 GeneMarkS-2+ CDS 535678 536400 . - 0 ID=cds-WP_001605114.1;Parent=gene-CCO35_RS16885;Dbxref=GenBank:WP_001605114.1;Name=WP_001605114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS16885;product=hypothetical protein;protein_id=WP_001605114.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 536871 537047 . + . ID=gene-CCO35_RS16890;Name=CCO35_RS16890;end_range=537047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS16890;old_locus_tag=CCO35_16880;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 536871 537047 . + 0 ID=cds-CCO35_RS16890;Parent=gene-CCO35_RS16890;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=537047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096565.1;locus_tag=CCO35_RS16890;partial=true;product=recombination protein NinG;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 537185 537688 . + . ID=gene-CCO35_RS24130;Name=CCO35_RS24130;end_range=537688,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24130;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 537185 537688 . + 0 ID=cds-CCO35_RS24130;Parent=gene-CCO35_RS24130;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=537688,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_156015302.1;locus_tag=CCO35_RS24130;partial=true;product=pertussis toxin-like subunit ArtA;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq gene 537708 538133 . + . ID=gene-CCO35_RS16905;Name=CCO35_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16905;old_locus_tag=CCO35_16895 NZ_NPME01000004.1 Protein Homology CDS 537708 538133 . + 0 ID=cds-WP_000727928.1;Parent=gene-CCO35_RS16905;Dbxref=GenBank:WP_000727928.1;Name=WP_000727928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727929.1;locus_tag=CCO35_RS16905;product=subtilase family AB5 toxin binding subunit;protein_id=WP_000727928.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 538192 538362 . + . ID=gene-CCO35_RS24380;Name=CCO35_RS24380;end_range=538362,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24380;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 538192 538362 . + 0 ID=cds-CCO35_RS24380;Parent=gene-CCO35_RS24380;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=538362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406273.1;locus_tag=CCO35_RS24380;partial=true;product=putative holin;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 538521 538823 . + . ID=gene-CCO35_RS16915;Name=CCO35_RS16915;end_range=538823,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS16915;old_locus_tag=CCO35_16905;partial=true;pseudo=true;start_range=.,538521 NZ_NPME01000004.1 Protein Homology CDS 538521 538823 . + 0 ID=cds-CCO35_RS16915;Parent=gene-CCO35_RS16915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;end_range=538823,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461630.1;locus_tag=CCO35_RS16915;partial=true;product=recombinase family protein;pseudo=true;start_range=.,538521;transl_table=11 NZ_NPME01000004.1 RefSeq gene 539053 540018 . - . ID=gene-CCO35_RS16920;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=CCO35_RS16920;old_locus_tag=CCO35_16910 NZ_NPME01000004.1 Protein Homology CDS 539053 540018 . - 0 ID=cds-WP_000583298.1;Parent=gene-CCO35_RS16920;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=CCO35_RS16920;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 540015 541664 . - . ID=gene-CCO35_RS16925;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=CCO35_RS16925;old_locus_tag=CCO35_16915 NZ_NPME01000004.1 Protein Homology CDS 540015 541664 . - 0 ID=cds-WP_001241628.1;Parent=gene-CCO35_RS16925;Dbxref=GenBank:WP_001241628.1;Name=WP_001241628.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=CCO35_RS16925;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241628.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 541776 542756 . - . ID=gene-CCO35_RS16930;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=CCO35_RS16930;old_locus_tag=CCO35_16920 NZ_NPME01000004.1 Protein Homology CDS 541776 542756 . - 0 ID=cds-WP_001543112.1;Parent=gene-CCO35_RS16930;Dbxref=GenBank:WP_001543112.1;Name=WP_001543112.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=CCO35_RS16930;product=phage shock protein operon transcriptional activator;protein_id=WP_001543112.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 542927 543595 . + . ID=gene-CCO35_RS16935;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=CCO35_RS16935;old_locus_tag=CCO35_16925 NZ_NPME01000004.1 Protein Homology CDS 542927 543595 . + 0 ID=cds-WP_000511005.1;Parent=gene-CCO35_RS16935;Dbxref=GenBank:WP_000511005.1;Name=WP_000511005.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=CCO35_RS16935;product=phage shock protein PspA;protein_id=WP_000511005.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 543655 543879 . + . ID=gene-CCO35_RS16940;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=CCO35_RS16940;old_locus_tag=CCO35_16930 NZ_NPME01000004.1 Protein Homology CDS 543655 543879 . + 0 ID=cds-WP_001274953.1;Parent=gene-CCO35_RS16940;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=CCO35_RS16940;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 543879 544238 . + . ID=gene-CCO35_RS16945;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=CCO35_RS16945;old_locus_tag=CCO35_16935 NZ_NPME01000004.1 Protein Homology CDS 543879 544238 . + 0 ID=cds-WP_000508938.1;Parent=gene-CCO35_RS16945;Dbxref=GenBank:WP_000508938.1;Name=WP_000508938.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=CCO35_RS16945;product=envelope stress response membrane protein PspC;protein_id=WP_000508938.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 544261 544479 . + . ID=gene-CCO35_RS16950;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=CCO35_RS16950;old_locus_tag=CCO35_16940 NZ_NPME01000004.1 Protein Homology CDS 544261 544479 . + 0 ID=cds-WP_001097608.1;Parent=gene-CCO35_RS16950;Dbxref=GenBank:WP_001097608.1;Name=WP_001097608.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=CCO35_RS16950;product=phage shock protein PspD;protein_id=WP_001097608.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 544555 544869 . + . ID=gene-CCO35_RS16955;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=CCO35_RS16955;old_locus_tag=CCO35_16945 NZ_NPME01000004.1 Protein Homology CDS 544555 544869 . + 0 ID=cds-WP_000913432.1;Parent=gene-CCO35_RS16955;Dbxref=GenBank:WP_000913432.1;Name=WP_000913432.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=CCO35_RS16955;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913432.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 545018 546415 . + . ID=gene-CCO35_RS16960;Name=CCO35_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16960;old_locus_tag=CCO35_16950 NZ_NPME01000004.1 Protein Homology CDS 545018 546415 . + 0 ID=cds-WP_000825860.1;Parent=gene-CCO35_RS16960;Dbxref=GenBank:WP_000825860.1;Name=WP_000825860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=CCO35_RS16960;product=YcjX family protein;protein_id=WP_000825860.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 546412 547473 . + . ID=gene-CCO35_RS16965;Name=CCO35_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16965;old_locus_tag=CCO35_16955 NZ_NPME01000004.1 Protein Homology CDS 546412 547473 . + 0 ID=cds-WP_001294472.1;Parent=gene-CCO35_RS16965;Dbxref=GenBank:WP_001294472.1;Name=WP_001294472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=CCO35_RS16965;product=TIGR01620 family protein;protein_id=WP_001294472.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 547621 549162 . + . ID=gene-CCO35_RS16970;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=CCO35_RS16970;old_locus_tag=CCO35_16960 NZ_NPME01000004.1 Protein Homology CDS 547621 549162 . + 0 ID=cds-WP_001235493.1;Parent=gene-CCO35_RS16970;Dbxref=GenBank:WP_001235493.1;Name=WP_001235493.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=CCO35_RS16970;product=transcriptional regulator TyrR;protein_id=WP_001235493.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 549253 549759 . - . ID=gene-CCO35_RS16975;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CCO35_RS16975;old_locus_tag=CCO35_16965 NZ_NPME01000004.1 Protein Homology CDS 549253 549759 . - 0 ID=cds-WP_000084401.1;Parent=gene-CCO35_RS16975;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=CCO35_RS16975;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 549875 550840 . + . ID=gene-CCO35_RS16980;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=CCO35_RS16980;old_locus_tag=CCO35_16970 NZ_NPME01000004.1 Protein Homology CDS 549875 550840 . + 0 ID=cds-WP_001258072.1;Parent=gene-CCO35_RS16980;Dbxref=GenBank:WP_001258072.1;Name=WP_001258072.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=CCO35_RS16980;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001258072.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 550815 551543 . - . ID=gene-CCO35_RS16985;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=CCO35_RS16985;old_locus_tag=CCO35_16975 NZ_NPME01000004.1 Protein Homology CDS 550815 551543 . - 0 ID=cds-WP_000219104.1;Parent=gene-CCO35_RS16985;Dbxref=GenBank:WP_000219104.1;Name=WP_000219104.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=CCO35_RS16985;product=murein tripeptide amidase MpaA;protein_id=WP_000219104.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 551733 553346 . + . ID=gene-CCO35_RS16990;Name=CCO35_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16990;old_locus_tag=CCO35_16980 NZ_NPME01000004.1 Protein Homology CDS 551733 553346 . + 0 ID=cds-WP_001216560.1;Parent=gene-CCO35_RS16990;Dbxref=GenBank:WP_001216560.1;Name=WP_001216560.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=CCO35_RS16990;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216560.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 553443 554372 . - . ID=gene-CCO35_RS16995;Name=CCO35_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS16995;old_locus_tag=CCO35_16985 NZ_NPME01000004.1 Protein Homology CDS 553443 554372 . - 0 ID=cds-WP_000814357.1;Parent=gene-CCO35_RS16995;Dbxref=GenBank:WP_000814357.1;Name=WP_000814357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=CCO35_RS16995;product=aromatic alcohol reductase;protein_id=WP_000814357.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 554492 555391 . + . ID=gene-CCO35_RS17000;Name=CCO35_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17000;old_locus_tag=CCO35_16990 NZ_NPME01000004.1 Protein Homology CDS 554492 555391 . + 0 ID=cds-WP_000359213.1;Parent=gene-CCO35_RS17000;Dbxref=GenBank:WP_000359213.1;Name=WP_000359213.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=CCO35_RS17000;product=LysR family transcriptional regulator;protein_id=WP_000359213.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 555667 556536 . + . ID=gene-CCO35_RS17005;Name=CCO35_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17005;old_locus_tag=CCO35_16995 NZ_NPME01000004.1 Protein Homology CDS 555667 556536 . + 0 ID=cds-WP_000456769.1;Parent=gene-CCO35_RS17005;Dbxref=GenBank:WP_000456769.1;Name=WP_000456769.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=CCO35_RS17005;product=aldo/keto reductase;protein_id=WP_000456769.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 556627 557340 . - . ID=gene-CCO35_RS17010;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=CCO35_RS17010;old_locus_tag=CCO35_17000 NZ_NPME01000004.1 Protein Homology CDS 556627 557340 . - 0 ID=cds-WP_000979084.1;Parent=gene-CCO35_RS17010;Dbxref=GenBank:WP_000979084.1;Name=WP_000979084.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=CCO35_RS17010;product=SDR family oxidoreductase;protein_id=WP_000979084.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 557418 558008 . + . ID=gene-CCO35_RS17015;Name=CCO35_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17015;old_locus_tag=CCO35_17005 NZ_NPME01000004.1 Protein Homology CDS 557418 558008 . + 0 ID=cds-WP_000208477.1;Parent=gene-CCO35_RS17015;Dbxref=GenBank:WP_000208477.1;Name=WP_000208477.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=CCO35_RS17015;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208477.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 558137 558373 . + . ID=gene-CCO35_RS17020;Name=CCO35_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17020;old_locus_tag=CCO35_17010 NZ_NPME01000004.1 Protein Homology CDS 558137 558373 . + 0 ID=cds-WP_001168016.1;Parent=gene-CCO35_RS17020;Dbxref=GenBank:WP_001168016.1;Name=WP_001168016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=CCO35_RS17020;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168016.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 558587 559696 . - . ID=gene-CCO35_RS17025;Name=CCO35_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17025;old_locus_tag=CCO35_17015 NZ_NPME01000004.1 Protein Homology CDS 558587 559696 . - 0 ID=cds-WP_000275489.1;Parent=gene-CCO35_RS17025;Dbxref=GenBank:WP_000275489.1;Name=WP_000275489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=CCO35_RS17025;product=hypothetical protein;protein_id=WP_000275489.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 560086 560943 . - . ID=gene-CCO35_RS17030;Name=CCO35_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17030;old_locus_tag=CCO35_17020 NZ_NPME01000004.1 Protein Homology CDS 560086 560943 . - 0 ID=cds-WP_077909923.1;Parent=gene-CCO35_RS17030;Dbxref=GenBank:WP_077909923.1;Name=WP_077909923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=CCO35_RS17030;product=GyrI-like domain-containing protein;protein_id=WP_077909923.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 561235 562080 . + . ID=gene-CCO35_RS17035;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=CCO35_RS17035;old_locus_tag=CCO35_17025 NZ_NPME01000004.1 Protein Homology CDS 561235 562080 . + 0 ID=cds-WP_000273676.1;Parent=gene-CCO35_RS17035;Dbxref=GenBank:WP_000273676.1;Name=WP_000273676.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=CCO35_RS17035;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_000273676.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 562155 564137 . + . ID=gene-CCO35_RS17040;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=CCO35_RS17040;old_locus_tag=CCO35_17030 NZ_NPME01000004.1 Protein Homology CDS 562155 564137 . + 0 ID=cds-WP_057393913.1;Parent=gene-CCO35_RS17040;Dbxref=GenBank:WP_057393913.1;Name=WP_057393913.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=CCO35_RS17040;product=two-partner secretion translocator ZirT;protein_id=WP_057393913.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 564164 564988 . + . ID=gene-CCO35_RS17045;Name=CCO35_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17045;old_locus_tag=CCO35_17035 NZ_NPME01000004.1 Protein Homology CDS 564164 564988 . + 0 ID=cds-WP_001611639.1;Parent=gene-CCO35_RS17045;Dbxref=GenBank:WP_001611639.1;Name=WP_001611639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666973.1;locus_tag=CCO35_RS17045;product=ZirS family two-partner secretion-like system exoprotein;protein_id=WP_001611639.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 565084 565641 . + . ID=gene-CCO35_RS17050;Name=CCO35_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17050;old_locus_tag=CCO35_17040 NZ_NPME01000004.1 Protein Homology CDS 565084 565641 . + 0 ID=cds-WP_001062618.1;Parent=gene-CCO35_RS17050;Dbxref=GenBank:WP_001062618.1;Name=WP_001062618.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=CCO35_RS17050;product=redoxin family protein;protein_id=WP_001062618.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 565746 566084 . - . ID=gene-CCO35_RS17055;Name=CCO35_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17055;old_locus_tag=CCO35_17045 NZ_NPME01000004.1 Protein Homology CDS 565746 566084 . - 0 ID=cds-WP_000051812.1;Parent=gene-CCO35_RS17055;Dbxref=GenBank:WP_000051812.1;Name=WP_000051812.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=CCO35_RS17055;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_000051812.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 566112 566798 . - . ID=gene-CCO35_RS17060;Name=CCO35_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17060;old_locus_tag=CCO35_17050 NZ_NPME01000004.1 Protein Homology CDS 566112 566798 . - 0 ID=cds-WP_023220563.1;Parent=gene-CCO35_RS17060;Dbxref=GenBank:WP_023220563.1;Name=WP_023220563.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=CCO35_RS17060;product=B3/B4 domain-containing protein;protein_id=WP_023220563.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 566842 567444 . + . ID=gene-CCO35_RS17065;Name=CCO35_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17065;old_locus_tag=CCO35_17055 NZ_NPME01000004.1 Protein Homology CDS 566842 567444 . + 0 ID=cds-WP_000163368.1;Parent=gene-CCO35_RS17065;Dbxref=GenBank:WP_000163368.1;Name=WP_000163368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=CCO35_RS17065;product=helix-turn-helix domain-containing protein;protein_id=WP_000163368.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 567526 568557 . - . ID=gene-CCO35_RS17070;Name=CCO35_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17070;old_locus_tag=CCO35_17060 NZ_NPME01000004.1 Protein Homology CDS 567526 568557 . - 0 ID=cds-WP_000493671.1;Parent=gene-CCO35_RS17070;Dbxref=GenBank:WP_000493671.1;Name=WP_000493671.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=CCO35_RS17070;product=mechanosensitive ion channel family protein;protein_id=WP_000493671.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 568796 569050 . + . ID=gene-CCO35_RS17075;Name=CCO35_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17075;old_locus_tag=CCO35_17065 NZ_NPME01000004.1 Protein Homology CDS 568796 569050 . + 0 ID=cds-WP_000605645.1;Parent=gene-CCO35_RS17075;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=CCO35_RS17075;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 569105 570052 . - . ID=gene-CCO35_RS17080;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=CCO35_RS17080;old_locus_tag=CCO35_17070 NZ_NPME01000004.1 Protein Homology CDS 569105 570052 . - 0 ID=cds-WP_001262138.1;Parent=gene-CCO35_RS17080;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=CCO35_RS17080;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 570203 570955 . - . ID=gene-CCO35_RS17085;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=CCO35_RS17085;old_locus_tag=CCO35_17075 NZ_NPME01000004.1 Protein Homology CDS 570203 570955 . - 0 ID=cds-WP_000611914.1;Parent=gene-CCO35_RS17085;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=CCO35_RS17085;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 571151 571666 . - . ID=gene-CCO35_RS17090;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=CCO35_RS17090;old_locus_tag=CCO35_17080 NZ_NPME01000004.1 Protein Homology CDS 571151 571666 . - 0 ID=cds-WP_000945034.1;Parent=gene-CCO35_RS17090;Dbxref=GenBank:WP_000945034.1;Name=WP_000945034.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=CCO35_RS17090;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945034.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 571924 572487 . + . ID=gene-CCO35_RS17095;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=CCO35_RS17095;old_locus_tag=CCO35_17085 NZ_NPME01000004.1 Protein Homology CDS 571924 572487 . + 0 ID=cds-WP_001046799.1;Parent=gene-CCO35_RS17095;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=CCO35_RS17095;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 572898 574052 . + . ID=gene-CCO35_RS17105;Name=CCO35_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17105;old_locus_tag=CCO35_17095 NZ_NPME01000004.1 Protein Homology CDS 572898 574052 . + 0 ID=cds-WP_000945624.1;Parent=gene-CCO35_RS17105;Dbxref=GenBank:WP_000945624.1;Name=WP_000945624.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=CCO35_RS17105;product=methyl-accepting chemotaxis protein;protein_id=WP_000945624.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 574198 575181 . + . ID=gene-CCO35_RS17110;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=CCO35_RS17110;old_locus_tag=CCO35_17100 NZ_NPME01000004.1 Protein Homology CDS 574198 575181 . + 0 ID=cds-WP_000387374.1;Parent=gene-CCO35_RS17110;Dbxref=GenBank:WP_000387374.1;Name=WP_000387374.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=CCO35_RS17110;product=zinc transporter ZntB;protein_id=WP_000387374.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 575457 575639 . + . ID=gene-CCO35_RS24385;Name=CCO35_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24385;old_locus_tag=CCO35_17105 NZ_NPME01000004.1 Protein Homology CDS 575457 575639 . + 0 ID=cds-WP_015405931.1;Parent=gene-CCO35_RS24385;Dbxref=GenBank:WP_015405931.1;Name=WP_015405931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048180.1;locus_tag=CCO35_RS24385;product=hypothetical protein;protein_id=WP_015405931.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 575668 577041 . + . ID=gene-CCO35_RS17120;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=CCO35_RS17120;old_locus_tag=CCO35_17110 NZ_NPME01000004.1 Protein Homology CDS 575668 577041 . + 0 ID=cds-WP_031568353.1;Parent=gene-CCO35_RS17120;Dbxref=GenBank:WP_031568353.1;Name=WP_031568353.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=CCO35_RS17120;product=ATP-dependent RNA helicase DbpA;protein_id=WP_031568353.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 577085 578020 . - . ID=gene-CCO35_RS17125;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=CCO35_RS17125;old_locus_tag=CCO35_17115 NZ_NPME01000004.1 Protein Homology CDS 577085 578020 . - 0 ID=cds-WP_031568355.1;Parent=gene-CCO35_RS17125;Dbxref=GenBank:WP_031568355.1;Name=WP_031568355.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=CCO35_RS17125;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_031568355.1;transl_table=11 NZ_NPME01000004.1 RefSeq pseudogene 578115 578266 . - . ID=gene-CCO35_RS17130;Name=CCO35_RS17130;end_range=578266,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS17130;old_locus_tag=CCO35_17120;partial=true;pseudo=true NZ_NPME01000004.1 Protein Homology CDS 578115 578266 . - 0 ID=cds-CCO35_RS17130;Parent=gene-CCO35_RS17130;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=578266,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=CCO35_RS17130;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPME01000004.1 RefSeq gene 578696 580528 . + . ID=gene-CCO35_RS17135;Name=CCO35_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17135;old_locus_tag=CCO35_17125 NZ_NPME01000004.1 Protein Homology CDS 578696 580528 . + 0 ID=cds-WP_001223393.1;Parent=gene-CCO35_RS17135;Dbxref=GenBank:WP_001223393.1;Name=WP_001223393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=CCO35_RS17135;product=DUF4765 family protein;protein_id=WP_001223393.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 580803 581141 . + . ID=gene-CCO35_RS17145;Name=CCO35_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17145;old_locus_tag=CCO35_17135 NZ_NPME01000004.1 Protein Homology CDS 580803 581141 . + 0 ID=cds-WP_000159242.1;Parent=gene-CCO35_RS17145;Dbxref=GenBank:WP_000159242.1;Name=WP_000159242.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=CCO35_RS17145;product=SMR family transporter;protein_id=WP_000159242.1;transl_table=11 NZ_NPME01000004.1 RefSeq gene 581194 581628 . - . ID=gene-CCO35_RS17150;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=CCO35_RS17150;old_locus_tag=CCO35_17140 NZ_NPME01000004.1 Protein Homology CDS 581194 581628 . - 0 ID=cds-WP_001082296.1;Parent=gene-CCO35_RS17150;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=CCO35_RS17150;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11 ##sequence-region NZ_NPME01000005.1 1 390026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000005.1 RefSeq region 1 390026 . + . ID=NZ_NPME01000005.1:1..390026;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000005.1 RefSeq gene 1 103 . + . ID=gene-CCO35_RS17160;Name=CCO35_RS17160;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS17160;old_locus_tag=CCO35_17150;partial=true;start_range=.,1 NZ_NPME01000005.1 cmsearch rRNA 1 103 . + . ID=rna-CCO35_RS17160;Parent=gene-CCO35_RS17160;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS17160;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPME01000005.1 cmsearch exon 1 103 . + . ID=exon-CCO35_RS17160-1;Parent=rna-CCO35_RS17160;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS17160;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPME01000005.1 RefSeq gene 197 312 . + . ID=gene-CCO35_RS17165;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO35_RS17165;old_locus_tag=CCO35_17155 NZ_NPME01000005.1 cmsearch rRNA 197 312 . + . ID=rna-CCO35_RS17165;Parent=gene-CCO35_RS17165;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS17165;product=5S ribosomal RNA NZ_NPME01000005.1 cmsearch exon 197 312 . + . ID=exon-CCO35_RS17165-1;Parent=rna-CCO35_RS17165;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS17165;product=5S ribosomal RNA NZ_NPME01000005.1 RefSeq gene 737 1192 . + . ID=gene-CCO35_RS17175;Name=CCO35_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17175;old_locus_tag=CCO35_17165 NZ_NPME01000005.1 Protein Homology CDS 737 1192 . + 0 ID=cds-WP_000985657.1;Parent=gene-CCO35_RS17175;Dbxref=GenBank:WP_000985657.1;Name=WP_000985657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=CCO35_RS17175;product=DUF4385 domain-containing protein;protein_id=WP_000985657.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 1296 2597 . + . ID=gene-CCO35_RS17180;Name=CCO35_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17180;old_locus_tag=CCO35_17170 NZ_NPME01000005.1 Protein Homology CDS 1296 2597 . + 0 ID=cds-WP_000807821.1;Parent=gene-CCO35_RS17180;Dbxref=GenBank:WP_000807821.1;Name=WP_000807821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=CCO35_RS17180;product=MFS transporter;protein_id=WP_000807821.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 2594 2917 . - . ID=gene-CCO35_RS17185;Name=CCO35_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17185;old_locus_tag=CCO35_17175 NZ_NPME01000005.1 Protein Homology CDS 2594 2917 . - 0 ID=cds-WP_001264476.1;Parent=gene-CCO35_RS17185;Dbxref=GenBank:WP_001264476.1;Name=WP_001264476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=CCO35_RS17185;product=YfiM family lipoprotein;protein_id=WP_001264476.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 2961 4316 . - . ID=gene-CCO35_RS17190;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=CCO35_RS17190;old_locus_tag=CCO35_17180 NZ_NPME01000005.1 Protein Homology CDS 2961 4316 . - 0 ID=cds-WP_000949286.1;Parent=gene-CCO35_RS17190;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=CCO35_RS17190;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 4431 7091 . - . ID=gene-CCO35_RS17195;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=CCO35_RS17195;old_locus_tag=CCO35_17185 NZ_NPME01000005.1 Protein Homology CDS 4431 7091 . - 0 ID=cds-WP_000082636.1;Parent=gene-CCO35_RS17195;Dbxref=GenBank:WP_000082636.1;Name=WP_000082636.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=CCO35_RS17195;product=protein lysine acetyltransferase;protein_id=WP_000082636.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 7145 7825 . - . ID=gene-CCO35_RS17200;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=CCO35_RS17200;old_locus_tag=CCO35_17190 NZ_NPME01000005.1 Protein Homology CDS 7145 7825 . - 0 ID=cds-WP_000183642.1;Parent=gene-CCO35_RS17200;Dbxref=GenBank:WP_000183642.1;Name=WP_000183642.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=CCO35_RS17200;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000183642.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 7898 8317 . - . ID=gene-CCO35_RS17205;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=CCO35_RS17205;old_locus_tag=CCO35_17195 NZ_NPME01000005.1 Protein Homology CDS 7898 8317 . - 0 ID=cds-WP_001098732.1;Parent=gene-CCO35_RS17205;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=CCO35_RS17205;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 8521 9558 . + . ID=gene-CCO35_RS17215;Name=CCO35_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17215;old_locus_tag=CCO35_17205 NZ_NPME01000005.1 Protein Homology CDS 8521 9558 . + 0 ID=cds-WP_000997368.1;Parent=gene-CCO35_RS17215;Dbxref=GenBank:WP_000997368.1;Name=WP_000997368.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=CCO35_RS17215;product=tRNA/rRNA methyltransferase;protein_id=WP_000997368.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 9674 10363 . - . ID=gene-CCO35_RS17220;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=CCO35_RS17220;old_locus_tag=CCO35_17210 NZ_NPME01000005.1 Protein Homology CDS 9674 10363 . - 0 ID=cds-WP_000179978.1;Parent=gene-CCO35_RS17220;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=CCO35_RS17220;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 10682 11065 . + . ID=gene-CCO35_RS17225;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=CCO35_RS17225;old_locus_tag=CCO35_17215 NZ_NPME01000005.1 Protein Homology CDS 10682 11065 . + 0 ID=cds-WP_000627811.1;Parent=gene-CCO35_RS17225;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=CCO35_RS17225;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 11127 11714 . - . ID=gene-CCO35_RS17230;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=CCO35_RS17230;old_locus_tag=CCO35_17220 NZ_NPME01000005.1 Protein Homology CDS 11127 11714 . - 0 ID=cds-WP_000188416.1;Parent=gene-CCO35_RS17230;Dbxref=GenBank:WP_000188416.1;Name=WP_000188416.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=CCO35_RS17230;product=cysteine/O-acetylserine transporter;protein_id=WP_000188416.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 11817 12716 . + . ID=gene-CCO35_RS17235;Name=CCO35_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17235;old_locus_tag=CCO35_17225 NZ_NPME01000005.1 Protein Homology CDS 11817 12716 . + 0 ID=cds-WP_077917722.1;Parent=gene-CCO35_RS17235;Dbxref=GenBank:WP_077917722.1;Name=WP_077917722.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=CCO35_RS17235;product=LysR family transcriptional regulator;protein_id=WP_077917722.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 12734 14068 . - . ID=gene-CCO35_RS17240;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=CCO35_RS17240;old_locus_tag=CCO35_17230 NZ_NPME01000005.1 Protein Homology CDS 12734 14068 . - 0 ID=cds-WP_000219174.1;Parent=gene-CCO35_RS17240;Dbxref=GenBank:WP_000219174.1;Name=WP_000219174.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=CCO35_RS17240;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219174.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 14198 14935 . + . ID=gene-CCO35_RS17245;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=CCO35_RS17245;old_locus_tag=CCO35_17235 NZ_NPME01000005.1 Protein Homology CDS 14198 14935 . + 0 ID=cds-WP_000083343.1;Parent=gene-CCO35_RS17245;Dbxref=GenBank:WP_000083343.1;Name=WP_000083343.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=CCO35_RS17245;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_000083343.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 14920 16542 . - . ID=gene-CCO35_RS17250;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=CCO35_RS17250;old_locus_tag=CCO35_17240 NZ_NPME01000005.1 Protein Homology CDS 14920 16542 . - 0 ID=cds-WP_024148538.1;Parent=gene-CCO35_RS17250;Dbxref=GenBank:WP_024148538.1;Name=WP_024148538.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=CCO35_RS17250;product=L-aspartate oxidase;protein_id=WP_024148538.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 16806 16970 . + . ID=gene-CCO35_RS23715;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=CCO35_RS23715 NZ_NPME01000005.1 Protein Homology CDS 16806 16970 . + 0 ID=cds-WP_014344135.1;Parent=gene-CCO35_RS23715;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=CCO35_RS23715;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 16967 17542 . + . ID=gene-CCO35_RS17260;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CCO35_RS17260;old_locus_tag=CCO35_17250 NZ_NPME01000005.1 Protein Homology CDS 16967 17542 . + 0 ID=cds-WP_000003307.1;Parent=gene-CCO35_RS17260;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=CCO35_RS17260;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 17574 18224 . + . ID=gene-CCO35_RS17265;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=CCO35_RS17265;old_locus_tag=CCO35_17255 NZ_NPME01000005.1 Protein Homology CDS 17574 18224 . + 0 ID=cds-WP_001168374.1;Parent=gene-CCO35_RS17265;Dbxref=GenBank:WP_001168374.1;Name=WP_001168374.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=CCO35_RS17265;product=anti-sigma-E factor RseA;protein_id=WP_001168374.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 18224 19180 . + . ID=gene-CCO35_RS17270;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=CCO35_RS17270;old_locus_tag=CCO35_17260 NZ_NPME01000005.1 Protein Homology CDS 18224 19180 . + 0 ID=cds-WP_000812019.1;Parent=gene-CCO35_RS17270;Dbxref=GenBank:WP_000812019.1;Name=WP_000812019.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=CCO35_RS17270;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812019.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 19177 19656 . + . ID=gene-CCO35_RS17275;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=CCO35_RS17275;old_locus_tag=CCO35_17265 NZ_NPME01000005.1 Protein Homology CDS 19177 19656 . + 0 ID=cds-WP_000589089.1;Parent=gene-CCO35_RS17275;Dbxref=GenBank:WP_000589089.1;Name=WP_000589089.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=CCO35_RS17275;product=SoxR-reducing system protein RseC;protein_id=WP_000589089.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 19908 21707 . + . ID=gene-CCO35_RS17285;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CCO35_RS17285;old_locus_tag=CCO35_17275 NZ_NPME01000005.1 Protein Homology CDS 19908 21707 . + 0 ID=cds-WP_000790154.1;Parent=gene-CCO35_RS17285;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=CCO35_RS17285;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 21724 22698 . + . ID=gene-CCO35_RS17290;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CCO35_RS17290;old_locus_tag=CCO35_17280 NZ_NPME01000005.1 Protein Homology CDS 21724 22698 . + 0 ID=cds-WP_000002559.1;Parent=gene-CCO35_RS17290;Dbxref=GenBank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=CCO35_RS17290;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 22972 23652 . + . ID=gene-CCO35_RS17300;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CCO35_RS17300;old_locus_tag=CCO35_17290 NZ_NPME01000005.1 Protein Homology CDS 22972 23652 . + 0 ID=cds-WP_001068341.1;Parent=gene-CCO35_RS17300;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=CCO35_RS17300;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 23649 24554 . + . ID=gene-CCO35_RS17305;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CCO35_RS17305;old_locus_tag=CCO35_17295 NZ_NPME01000005.1 Protein Homology CDS 23649 24554 . + 0 ID=cds-WP_000102230.1;Parent=gene-CCO35_RS17305;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=CCO35_RS17305;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 24566 25294 . + . ID=gene-CCO35_RS17310;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CCO35_RS17310;old_locus_tag=CCO35_17300 NZ_NPME01000005.1 Protein Homology CDS 24566 25294 . + 0 ID=cds-WP_000399380.1;Parent=gene-CCO35_RS17310;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=CCO35_RS17310;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 25306 26037 . + . ID=gene-CCO35_RS17315;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=CCO35_RS17315;old_locus_tag=CCO35_17305 NZ_NPME01000005.1 Protein Homology CDS 25306 26037 . + 0 ID=cds-WP_000818972.1;Parent=gene-CCO35_RS17315;Dbxref=GenBank:WP_000818972.1;Name=WP_000818972.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=CCO35_RS17315;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818972.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 26037 26417 . + . ID=gene-CCO35_RS17320;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CCO35_RS17320;old_locus_tag=CCO35_17310 NZ_NPME01000005.1 Protein Homology CDS 26037 26417 . + 0 ID=cds-WP_000986043.1;Parent=gene-CCO35_RS17320;Dbxref=GenBank:WP_000986043.1;Name=WP_000986043.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=CCO35_RS17320;product=holo-ACP synthase;protein_id=WP_000986043.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 26529 26789 . - . ID=gene-CCO35_RS17325;Name=CCO35_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17325;old_locus_tag=CCO35_17315 NZ_NPME01000005.1 Protein Homology CDS 26529 26789 . - 0 ID=cds-WP_001196290.1;Parent=gene-CCO35_RS17325;Dbxref=GenBank:WP_001196290.1;Name=WP_001196290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=CCO35_RS17325;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196290.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 26827 27753 . - . ID=gene-CCO35_RS17330;Name=CCO35_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17330;old_locus_tag=CCO35_17320 NZ_NPME01000005.1 Protein Homology CDS 26827 27753 . - 0 ID=cds-WP_079963418.1;Parent=gene-CCO35_RS17330;Dbxref=GenBank:WP_079963418.1;Name=WP_079963418.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=CCO35_RS17330;product=LysR family transcriptional regulator;protein_id=WP_079963418.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 27869 29065 . + . ID=gene-CCO35_RS17335;Name=CCO35_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17335;old_locus_tag=CCO35_17325 NZ_NPME01000005.1 Protein Homology CDS 27869 29065 . + 0 ID=cds-WP_001276365.1;Parent=gene-CCO35_RS17335;Dbxref=GenBank:WP_001276365.1;Name=WP_001276365.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=CCO35_RS17335;product=L-lactate MFS transporter;protein_id=WP_001276365.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 29087 30004 . + . ID=gene-CCO35_RS17340;Name=CCO35_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17340;old_locus_tag=CCO35_17330 NZ_NPME01000005.1 Protein Homology CDS 29087 30004 . + 0 ID=cds-WP_080176983.1;Parent=gene-CCO35_RS17340;Dbxref=GenBank:WP_080176983.1;Name=WP_080176983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=CCO35_RS17340;product=oxidoreductase;protein_id=WP_080176983.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 30043 30891 . - . ID=gene-CCO35_RS17345;Name=CCO35_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17345;old_locus_tag=CCO35_17335 NZ_NPME01000005.1 Protein Homology CDS 30043 30891 . - 0 ID=cds-WP_000995688.1;Parent=gene-CCO35_RS17345;Dbxref=GenBank:WP_000995688.1;Name=WP_000995688.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=CCO35_RS17345;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995688.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 31007 31900 . + . ID=gene-CCO35_RS17350;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CCO35_RS17350;old_locus_tag=CCO35_17340 NZ_NPME01000005.1 Protein Homology CDS 31007 31900 . + 0 ID=cds-WP_031568431.1;Parent=gene-CCO35_RS17350;Dbxref=GenBank:WP_031568431.1;Name=WP_031568431.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=CCO35_RS17350;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_031568431.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 31911 33272 . + . ID=gene-CCO35_RS17355;Name=CCO35_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17355;old_locus_tag=CCO35_17345 NZ_NPME01000005.1 Protein Homology CDS 31911 33272 . + 0 ID=cds-WP_000361660.1;Parent=gene-CCO35_RS17355;Dbxref=GenBank:WP_000361660.1;Name=WP_000361660.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=CCO35_RS17355;product=PTS transporter subunit EIIC;protein_id=WP_000361660.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 33276 33911 . + . ID=gene-CCO35_RS17360;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=CCO35_RS17360;old_locus_tag=CCO35_17350 NZ_NPME01000005.1 Protein Homology CDS 33276 33911 . + 0 ID=cds-WP_000253558.1;Parent=gene-CCO35_RS17360;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=CCO35_RS17360;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 33936 34487 . + . ID=gene-CCO35_RS17365;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CCO35_RS17365;old_locus_tag=CCO35_17355 NZ_NPME01000005.1 Protein Homology CDS 33936 34487 . + 0 ID=cds-WP_001134559.1;Parent=gene-CCO35_RS17365;Dbxref=GenBank:WP_001134559.1;Name=WP_001134559.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=CCO35_RS17365;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134559.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 34538 36082 . - . ID=gene-CCO35_RS17370;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=CCO35_RS17370;old_locus_tag=CCO35_17360 NZ_NPME01000005.1 Protein Homology CDS 34538 36082 . - 0 ID=cds-WP_000734249.1;Parent=gene-CCO35_RS17370;Dbxref=GenBank:WP_000734249.1;Name=WP_000734249.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=CCO35_RS17370;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734249.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 36083 36316 . - . ID=gene-CCO35_RS17375;Name=CCO35_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17375;old_locus_tag=CCO35_17365 NZ_NPME01000005.1 Protein Homology CDS 36083 36316 . - 0 ID=cds-WP_001543559.1;Parent=gene-CCO35_RS17375;Dbxref=GenBank:WP_001543559.1;Name=WP_001543559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=CCO35_RS17375;product=hypothetical protein;protein_id=WP_001543559.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 36338 40225 . + . ID=gene-CCO35_RS17380;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=CCO35_RS17380;old_locus_tag=CCO35_17370 NZ_NPME01000005.1 Protein Homology CDS 36338 40225 . + 0 ID=cds-WP_024147054.1;Parent=gene-CCO35_RS17380;Dbxref=GenBank:WP_024147054.1;Name=WP_024147054.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=CCO35_RS17380;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_024147054.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 40873 42303 . + . ID=gene-CCO35_RS17385;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=CCO35_RS17385;old_locus_tag=CCO35_17375 NZ_NPME01000005.1 Protein Homology CDS 40873 42303 . + 0 ID=cds-WP_023136414.1;Parent=gene-CCO35_RS17385;Dbxref=GenBank:WP_023136414.1;Name=WP_023136414.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=CCO35_RS17385;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_023136414.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 42305 43069 . + . ID=gene-CCO35_RS17390;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=CCO35_RS17390;old_locus_tag=CCO35_17380 NZ_NPME01000005.1 Protein Homology CDS 42305 43069 . + 0 ID=cds-WP_077916018.1;Parent=gene-CCO35_RS17390;Dbxref=GenBank:WP_077916018.1;Name=WP_077916018.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=CCO35_RS17390;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_077916018.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 43069 44403 . + . ID=gene-CCO35_RS17395;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=CCO35_RS17395;old_locus_tag=CCO35_17385 NZ_NPME01000005.1 Protein Homology CDS 43069 44403 . + 0 ID=cds-WP_024131152.1;Parent=gene-CCO35_RS17395;Dbxref=GenBank:WP_024131152.1;Name=WP_024131152.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=CCO35_RS17395;product=two-component system response regulator GlrR;protein_id=WP_024131152.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 44480 44818 . + . ID=gene-CCO35_RS17400;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=CCO35_RS17400;old_locus_tag=CCO35_17390 NZ_NPME01000005.1 Protein Homology CDS 44480 44818 . + 0 ID=cds-WP_000717694.1;Parent=gene-CCO35_RS17400;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=CCO35_RS17400;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 44867 46327 . - . ID=gene-CCO35_RS17405;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=CCO35_RS17405;old_locus_tag=CCO35_17395 NZ_NPME01000005.1 Protein Homology CDS 44867 46327 . - 0 ID=cds-WP_000856793.1;Parent=gene-CCO35_RS17405;Dbxref=GenBank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=CCO35_RS17405;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 46383 48527 . - . ID=gene-CCO35_RS17410;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=CCO35_RS17410;old_locus_tag=CCO35_17400 NZ_NPME01000005.1 Protein Homology CDS 46383 48527 . - 0 ID=cds-WP_001100652.1;Parent=gene-CCO35_RS17410;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=CCO35_RS17410;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 48610 49941 . - . ID=gene-CCO35_RS17415;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=CCO35_RS17415;old_locus_tag=CCO35_17405 NZ_NPME01000005.1 Protein Homology CDS 48610 49941 . - 0 ID=cds-WP_000100008.1;Parent=gene-CCO35_RS17415;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=CCO35_RS17415;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 50302 51849 . - . ID=gene-CCO35_RS17420;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=CCO35_RS17420;old_locus_tag=CCO35_17410 NZ_NPME01000005.1 Protein Homology CDS 50302 51849 . - 0 ID=cds-WP_031568451.1;Parent=gene-CCO35_RS17420;Dbxref=GenBank:WP_031568451.1;Name=WP_031568451.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=CCO35_RS17420;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_031568451.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 52031 53221 . - . ID=gene-CCO35_RS17425;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=CCO35_RS17425;old_locus_tag=CCO35_17415 NZ_NPME01000005.1 Protein Homology CDS 52031 53221 . - 0 ID=cds-WP_000883141.1;Parent=gene-CCO35_RS17425;Dbxref=GenBank:WP_000883141.1;Name=WP_000883141.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=CCO35_RS17425;product=NO-inducible flavohemoprotein;protein_id=WP_000883141.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 53546 54799 . + . ID=gene-CCO35_RS17430;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CCO35_RS17430;old_locus_tag=CCO35_17420 NZ_NPME01000005.1 Protein Homology CDS 53546 54799 . + 0 ID=cds-WP_000919173.1;Parent=gene-CCO35_RS17430;Dbxref=GenBank:WP_000919173.1;Name=WP_000919173.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=CCO35_RS17430;product=serine hydroxymethyltransferase;protein_id=WP_000919173.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 54995 56134 . + . ID=gene-CCO35_RS17435;Name=CCO35_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17435;old_locus_tag=CCO35_17425 NZ_NPME01000005.1 Protein Homology CDS 54995 56134 . + 0 ID=cds-WP_001173729.1;Parent=gene-CCO35_RS17435;Dbxref=GenBank:WP_001173729.1;Name=WP_001173729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=CCO35_RS17435;product=3-phenylpropionate MFS transporter;protein_id=WP_001173729.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 56129 57406 . - . ID=gene-CCO35_RS17440;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=CCO35_RS17440;old_locus_tag=CCO35_17430 NZ_NPME01000005.1 Protein Homology CDS 56129 57406 . - 0 ID=cds-WP_000982966.1;Parent=gene-CCO35_RS17440;Dbxref=GenBank:WP_000982966.1;Name=WP_000982966.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=CCO35_RS17440;product=stationary phase inducible protein CsiE;protein_id=WP_000982966.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 57532 58170 . + . ID=gene-CCO35_RS17445;Name=CCO35_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17445;old_locus_tag=CCO35_17435 NZ_NPME01000005.1 Protein Homology CDS 57532 58170 . + 0 ID=cds-WP_000843763.1;Parent=gene-CCO35_RS17445;Dbxref=GenBank:WP_000843763.1;Name=WP_000843763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=CCO35_RS17445;product=DUF1007 family protein;protein_id=WP_000843763.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 58161 59147 . + . ID=gene-CCO35_RS17450;Name=CCO35_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17450;old_locus_tag=CCO35_17440 NZ_NPME01000005.1 Protein Homology CDS 58161 59147 . + 0 ID=cds-WP_000111031.1;Parent=gene-CCO35_RS17450;Dbxref=GenBank:WP_000111031.1;Name=WP_000111031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=CCO35_RS17450;product=nickel/cobalt transporter;protein_id=WP_000111031.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 59148 60161 . - . ID=gene-CCO35_RS17455;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=CCO35_RS17455;old_locus_tag=CCO35_17445 NZ_NPME01000005.1 Protein Homology CDS 59148 60161 . - 0 ID=cds-WP_000020685.1;Parent=gene-CCO35_RS17455;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=CCO35_RS17455;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 60173 60991 . - . ID=gene-CCO35_RS17460;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=CCO35_RS17460;old_locus_tag=CCO35_17450 NZ_NPME01000005.1 Protein Homology CDS 60173 60991 . - 0 ID=cds-WP_000017587.1;Parent=gene-CCO35_RS17460;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=CCO35_RS17460;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 60995 62038 . - . ID=gene-CCO35_RS17465;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=CCO35_RS17465;old_locus_tag=CCO35_17455 NZ_NPME01000005.1 Protein Homology CDS 60995 62038 . - 0 ID=cds-WP_000985214.1;Parent=gene-CCO35_RS17465;Dbxref=GenBank:WP_000985214.1;Name=WP_000985214.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=CCO35_RS17465;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985214.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 62220 63098 . - . ID=gene-CCO35_RS17470;Name=CCO35_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17470;old_locus_tag=CCO35_17460 NZ_NPME01000005.1 Protein Homology CDS 62220 63098 . - 0 ID=cds-WP_023218659.1;Parent=gene-CCO35_RS17470;Dbxref=GenBank:WP_023218659.1;Name=WP_023218659.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=CCO35_RS17470;product=alpha/beta hydrolase;protein_id=WP_023218659.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 63243 64046 . - . ID=gene-CCO35_RS17475;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=CCO35_RS17475;old_locus_tag=CCO35_17465 NZ_NPME01000005.1 Protein Homology CDS 63243 64046 . - 0 ID=cds-WP_000553467.1;Parent=gene-CCO35_RS17475;Dbxref=GenBank:WP_000553467.1;Name=WP_000553467.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=CCO35_RS17475;product=inositol-1-monophosphatase;protein_id=WP_000553467.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 64165 64896 . + . ID=gene-CCO35_RS17480;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=CCO35_RS17480;old_locus_tag=CCO35_17470 NZ_NPME01000005.1 Protein Homology CDS 64165 64896 . + 0 ID=cds-WP_000940032.1;Parent=gene-CCO35_RS17480;Dbxref=GenBank:WP_000940032.1;Name=WP_000940032.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=CCO35_RS17480;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940032.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 65056 65550 . + . ID=gene-CCO35_RS17485;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=CCO35_RS17485;old_locus_tag=CCO35_17475 NZ_NPME01000005.1 Protein Homology CDS 65056 65550 . + 0 ID=cds-WP_001241346.1;Parent=gene-CCO35_RS17485;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=CCO35_RS17485;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 65731 66945 . + . ID=gene-CCO35_RS17490;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=CCO35_RS17490;old_locus_tag=CCO35_17480 NZ_NPME01000005.1 Protein Homology CDS 65731 66945 . + 0 ID=cds-WP_000775267.1;Parent=gene-CCO35_RS17490;Dbxref=GenBank:WP_000775267.1;Name=WP_000775267.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=CCO35_RS17490;product=cysteine desulfurase;protein_id=WP_000775267.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 66973 67359 . + . ID=gene-CCO35_RS17495;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=CCO35_RS17495;old_locus_tag=CCO35_17485 NZ_NPME01000005.1 Protein Homology CDS 66973 67359 . + 0 ID=cds-WP_000331704.1;Parent=gene-CCO35_RS17495;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=CCO35_RS17495;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 67388 67711 . + . ID=gene-CCO35_RS17500;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=CCO35_RS17500;old_locus_tag=CCO35_17490 NZ_NPME01000005.1 Protein Homology CDS 67388 67711 . + 0 ID=cds-WP_000028952.1;Parent=gene-CCO35_RS17500;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=CCO35_RS17500;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 67907 68422 . + . ID=gene-CCO35_RS17505;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=CCO35_RS17505;old_locus_tag=CCO35_17495 NZ_NPME01000005.1 Protein Homology CDS 67907 68422 . + 0 ID=cds-WP_000384398.1;Parent=gene-CCO35_RS17505;Dbxref=GenBank:WP_000384398.1;Name=WP_000384398.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=CCO35_RS17505;product=co-chaperone HscB;protein_id=WP_000384398.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 68435 70285 . + . ID=gene-CCO35_RS17510;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=CCO35_RS17510;old_locus_tag=CCO35_17500 NZ_NPME01000005.1 Protein Homology CDS 68435 70285 . + 0 ID=cds-WP_031568472.1;Parent=gene-CCO35_RS17510;Dbxref=GenBank:WP_031568472.1;Name=WP_031568472.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=CCO35_RS17510;product=Fe-S protein assembly chaperone HscA;protein_id=WP_031568472.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 70287 70622 . + . ID=gene-CCO35_RS17515;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=CCO35_RS17515;old_locus_tag=CCO35_17505 NZ_NPME01000005.1 Protein Homology CDS 70287 70622 . + 0 ID=cds-WP_001124466.1;Parent=gene-CCO35_RS17515;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=CCO35_RS17515;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 70634 70834 . + . ID=gene-CCO35_RS17520;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=CCO35_RS17520;old_locus_tag=CCO35_17510 NZ_NPME01000005.1 Protein Homology CDS 70634 70834 . + 0 ID=cds-WP_000523623.1;Parent=gene-CCO35_RS17520;Dbxref=GenBank:WP_000523623.1;Name=WP_000523623.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=CCO35_RS17520;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523623.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 70888 72171 . + . ID=gene-CCO35_RS17525;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=CCO35_RS17525;old_locus_tag=CCO35_17515 NZ_NPME01000005.1 Protein Homology CDS 70888 72171 . + 0 ID=cds-WP_000133546.1;Parent=gene-CCO35_RS17525;Dbxref=GenBank:WP_000133546.1;Name=WP_000133546.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=CCO35_RS17525;product=aminopeptidase PepB;protein_id=WP_000133546.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 72281 73057 . + . ID=gene-CCO35_RS17530;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO35_RS17530;old_locus_tag=CCO35_17520 NZ_NPME01000005.1 Protein Homology CDS 72281 73057 . + 0 ID=cds-WP_001522413.1;Parent=gene-CCO35_RS17530;Dbxref=GenBank:WP_001522413.1;Name=WP_001522413.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=CCO35_RS17530;product=enhanced serine sensitivity protein SseB;protein_id=WP_001522413.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 73094 73210 . - . ID=gene-CCO35_RS24390;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=CCO35_RS24390 NZ_NPME01000005.1 Protein Homology CDS 73094 73210 . - 0 ID=cds-WP_350406992.1;Parent=gene-CCO35_RS24390;Dbxref=GenBank:WP_350406992.1;Name=WP_350406992.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=CCO35_RS24390;product=small toxic inner membrane protein TimP;protein_id=WP_350406992.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 73626 74468 . - . ID=gene-CCO35_RS17540;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO35_RS17540;old_locus_tag=CCO35_17530 NZ_NPME01000005.1 Protein Homology CDS 73626 74468 . - 0 ID=cds-WP_000205241.1;Parent=gene-CCO35_RS17540;Dbxref=GenBank:WP_000205241.1;Name=WP_000205241.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=CCO35_RS17540;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000205241.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 74677 79611 . + . ID=gene-CCO35_RS17545;Name=CCO35_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17545;old_locus_tag=CCO35_17535 NZ_NPME01000005.1 Protein Homology CDS 74677 79611 . + 0 ID=cds-WP_094965368.1;Parent=gene-CCO35_RS17545;Dbxref=GenBank:WP_094965368.1;Name=WP_094965368.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=CCO35_RS17545;product=alpha-2-macroglobulin family protein;protein_id=WP_094965368.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 79612 81927 . + . ID=gene-CCO35_RS17550;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=CCO35_RS17550;old_locus_tag=CCO35_17540 NZ_NPME01000005.1 Protein Homology CDS 79612 81927 . + 0 ID=cds-WP_023201541.1;Parent=gene-CCO35_RS17550;Dbxref=GenBank:WP_023201541.1;Name=WP_023201541.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=CCO35_RS17550;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_023201541.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 82082 84460 . + . ID=gene-CCO35_RS17555;Name=CCO35_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17555;old_locus_tag=CCO35_17545 NZ_NPME01000005.1 Protein Homology CDS 82082 84460 . + 0 ID=cds-WP_023214301.1;Parent=gene-CCO35_RS17555;Dbxref=GenBank:WP_023214301.1;Name=WP_023214301.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=CCO35_RS17555;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_023214301.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 84457 85086 . + . ID=gene-CCO35_RS17560;Name=CCO35_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17560;old_locus_tag=CCO35_17550 NZ_NPME01000005.1 Protein Homology CDS 84457 85086 . + 0 ID=cds-WP_023136462.1;Parent=gene-CCO35_RS17560;Dbxref=GenBank:WP_023136462.1;Name=WP_023136462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=CCO35_RS17560;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_023136462.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 85079 85888 . + . ID=gene-CCO35_RS17565;Name=CCO35_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17565;old_locus_tag=CCO35_17555 NZ_NPME01000005.1 Protein Homology CDS 85079 85888 . + 0 ID=cds-WP_031568487.1;Parent=gene-CCO35_RS17565;Dbxref=GenBank:WP_031568487.1;Name=WP_031568487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=CCO35_RS17565;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_031568487.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 85888 86751 . + . ID=gene-CCO35_RS17570;Name=CCO35_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17570;old_locus_tag=CCO35_17560 NZ_NPME01000005.1 Protein Homology CDS 85888 86751 . + 0 ID=cds-WP_023219897.1;Parent=gene-CCO35_RS17570;Dbxref=GenBank:WP_023219897.1;Name=WP_023219897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=CCO35_RS17570;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_023219897.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 86872 87303 . + . ID=gene-CCO35_RS17575;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CCO35_RS17575;old_locus_tag=CCO35_17565 NZ_NPME01000005.1 Protein Homology CDS 86872 87303 . + 0 ID=cds-WP_000963846.1;Parent=gene-CCO35_RS17575;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=CCO35_RS17575;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 87510 88676 . + . ID=gene-CCO35_RS17580;Name=CCO35_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17580;old_locus_tag=CCO35_17570 NZ_NPME01000005.1 Protein Homology CDS 87510 88676 . + 0 ID=cds-WP_000003206.1;Parent=gene-CCO35_RS17580;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=CCO35_RS17580;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 88969 89973 . + . ID=gene-CCO35_RS17590;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=CCO35_RS17590;old_locus_tag=CCO35_17580 NZ_NPME01000005.1 Protein Homology CDS 88969 89973 . + 0 ID=cds-WP_001090885.1;Parent=gene-CCO35_RS17590;Dbxref=GenBank:WP_001090885.1;Name=WP_001090885.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=CCO35_RS17590;product=cytoskeleton protein RodZ;protein_id=WP_001090885.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 90000 91118 . + . ID=gene-CCO35_RS17595;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CCO35_RS17595;old_locus_tag=CCO35_17585 NZ_NPME01000005.1 Protein Homology CDS 90000 91118 . + 0 ID=cds-WP_031568494.1;Parent=gene-CCO35_RS17595;Dbxref=GenBank:WP_031568494.1;Name=WP_031568494.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=CCO35_RS17595;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_031568494.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 91229 92503 . + . ID=gene-CCO35_RS17600;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CCO35_RS17600;old_locus_tag=CCO35_17590 NZ_NPME01000005.1 Protein Homology CDS 91229 92503 . + 0 ID=cds-WP_001107141.1;Parent=gene-CCO35_RS17600;Dbxref=GenBank:WP_001107141.1;Name=WP_001107141.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=CCO35_RS17600;product=histidine--tRNA ligase;protein_id=WP_001107141.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 92517 93137 . + . ID=gene-CCO35_RS17605;Name=CCO35_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17605;old_locus_tag=CCO35_17595 NZ_NPME01000005.1 Protein Homology CDS 92517 93137 . + 0 ID=cds-WP_000409190.1;Parent=gene-CCO35_RS17605;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=CCO35_RS17605;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 93148 94326 . + . ID=gene-CCO35_RS17610;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=CCO35_RS17610;old_locus_tag=CCO35_17600 NZ_NPME01000005.1 Protein Homology CDS 93148 94326 . + 0 ID=cds-WP_001177071.1;Parent=gene-CCO35_RS17610;Dbxref=GenBank:WP_001177071.1;Name=WP_001177071.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=CCO35_RS17610;product=outer membrane protein assembly factor BamB;protein_id=WP_001177071.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 94443 95915 . + . ID=gene-CCO35_RS17615;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CCO35_RS17615;old_locus_tag=CCO35_17605 NZ_NPME01000005.1 Protein Homology CDS 94443 95915 . + 0 ID=cds-WP_000249411.1;Parent=gene-CCO35_RS17615;Dbxref=GenBank:WP_000249411.1;Name=WP_000249411.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=CCO35_RS17615;product=ribosome biogenesis GTPase Der;protein_id=WP_000249411.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 96004 96225 . + . ID=gene-CCO35_RS17620;Name=CCO35_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17620;old_locus_tag=CCO35_17610 NZ_NPME01000005.1 Protein Homology CDS 96004 96225 . + 0 ID=cds-WP_031568501.1;Parent=gene-CCO35_RS17620;Dbxref=GenBank:WP_031568501.1;Name=WP_031568501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=CCO35_RS17620;product=zinc ribbon domain-containing protein;protein_id=WP_031568501.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 96572 98764 . + . ID=gene-CCO35_RS17625;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=CCO35_RS17625;old_locus_tag=CCO35_17615 NZ_NPME01000005.1 Protein Homology CDS 96572 98764 . + 0 ID=cds-WP_031568503.1;Parent=gene-CCO35_RS17625;Dbxref=GenBank:WP_031568503.1;Name=WP_031568503.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=CCO35_RS17625;product=intimin-like inverse autotransporter SinH;protein_id=WP_031568503.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 98822 99790 . + . ID=gene-CCO35_RS17630;Name=CCO35_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17630;old_locus_tag=CCO35_17620 NZ_NPME01000005.1 Protein Homology CDS 98822 99790 . + 0 ID=cds-WP_031568505.1;Parent=gene-CCO35_RS17630;Dbxref=GenBank:WP_031568505.1;Name=WP_031568505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=CCO35_RS17630;product=SinI family autotransporter-associated protein;protein_id=WP_031568505.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 99910 105513 . + . ID=gene-CCO35_RS17635;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=CCO35_RS17635;old_locus_tag=CCO35_17625 NZ_NPME01000005.1 Protein Homology CDS 99910 105513 . + 0 ID=cds-WP_072010151.1;Parent=gene-CCO35_RS17635;Dbxref=GenBank:WP_072010151.1;Name=WP_072010151.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081439.1;locus_tag=CCO35_RS17635;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_072010151.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 105639 112949 . + . ID=gene-CCO35_RS17640;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;locus_tag=CCO35_RS17640;old_locus_tag=CCO35_17630 NZ_NPME01000005.1 Protein Homology CDS 105639 112949 . + 0 ID=cds-WP_080148196.1;Parent=gene-CCO35_RS17640;Dbxref=GenBank:WP_080148196.1;Name=WP_080148196.1;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=CCO35_RS17640;product=DUF823/DUF824 repeat adhesin RatB;protein_id=WP_080148196.1;transl_table=11 NZ_NPME01000005.1 RefSeq pseudogene 112950 113050 . + . ID=gene-CCO35_RS24395;Name=CCO35_RS24395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24395;old_locus_tag=CCO35_17635;partial=true;pseudo=true;start_range=.,112950 NZ_NPME01000005.1 Protein Homology CDS 112950 113050 . + 0 ID=cds-CCO35_RS24395;Parent=gene-CCO35_RS24395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612303.1;locus_tag=CCO35_RS24395;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,112950;transl_table=11 NZ_NPME01000005.1 RefSeq gene 113549 118918 . + . ID=gene-CCO35_RS17650;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=CCO35_RS17650;old_locus_tag=CCO35_17640 NZ_NPME01000005.1 Protein Homology CDS 113549 118918 . + 0 ID=cds-WP_080148195.1;Parent=gene-CCO35_RS17650;Dbxref=GenBank:WP_080148195.1;Name=WP_080148195.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=CCO35_RS17650;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_080148195.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 119080 120429 . - . ID=gene-CCO35_RS17655;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CCO35_RS17655;old_locus_tag=CCO35_17645 NZ_NPME01000005.1 Protein Homology CDS 119080 120429 . - 0 ID=cds-WP_031568514.1;Parent=gene-CCO35_RS17655;Dbxref=GenBank:WP_031568514.1;Name=WP_031568514.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=CCO35_RS17655;product=exodeoxyribonuclease VII large subunit;protein_id=WP_031568514.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 120590 122056 . + . ID=gene-CCO35_RS17660;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CCO35_RS17660;old_locus_tag=CCO35_17650 NZ_NPME01000005.1 Protein Homology CDS 120590 122056 . + 0 ID=cds-WP_000944174.1;Parent=gene-CCO35_RS17660;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=CCO35_RS17660;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 122126 123703 . + . ID=gene-CCO35_RS17665;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CCO35_RS17665;old_locus_tag=CCO35_17655 NZ_NPME01000005.1 Protein Homology CDS 122126 123703 . + 0 ID=cds-WP_000138293.1;Parent=gene-CCO35_RS17665;Dbxref=GenBank:WP_000138293.1;Name=WP_000138293.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=CCO35_RS17665;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138293.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 124019 124423 . - . ID=gene-CCO35_RS17670;Name=CCO35_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17670;old_locus_tag=CCO35_17660 NZ_NPME01000005.1 Protein Homology CDS 124019 124423 . - 0 ID=cds-WP_000154266.1;Parent=gene-CCO35_RS17670;Dbxref=GenBank:WP_000154266.1;Name=WP_000154266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529521.1;locus_tag=CCO35_RS17670;product=DUF2251 domain-containing protein;protein_id=WP_000154266.1;transl_table=11 NZ_NPME01000005.1 RefSeq pseudogene 124599 125177 . - . ID=gene-CCO35_RS17675;Name=CCO35_RS17675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS17675;old_locus_tag=CCO35_17665;pseudo=true NZ_NPME01000005.1 Protein Homology CDS 124599 125177 . - 0 ID=cds-CCO35_RS17675;Parent=gene-CCO35_RS17675;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156408.1;locus_tag=CCO35_RS17675;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPME01000005.1 RefSeq gene 125285 126748 . - . ID=gene-CCO35_RS17680;Name=CCO35_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17680;old_locus_tag=CCO35_17670 NZ_NPME01000005.1 Protein Homology CDS 125285 126748 . - 0 ID=cds-WP_000782337.1;Parent=gene-CCO35_RS17680;Dbxref=GenBank:WP_000782337.1;Name=WP_000782337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782337.1;locus_tag=CCO35_RS17680;product=DUF1254 domain-containing protein;protein_id=WP_000782337.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 126763 128241 . - . ID=gene-CCO35_RS17685;Name=CCO35_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17685;old_locus_tag=CCO35_17675 NZ_NPME01000005.1 Protein Homology CDS 126763 128241 . - 0 ID=cds-WP_000865512.1;Parent=gene-CCO35_RS17685;Dbxref=GenBank:WP_000865512.1;Name=WP_000865512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865511.1;locus_tag=CCO35_RS17685;product=DUF1254 domain-containing protein;protein_id=WP_000865512.1;transl_table=11 NZ_NPME01000005.1 RefSeq pseudogene 128610 128945 . + . ID=gene-CCO35_RS17690;Name=CCO35_RS17690;end_range=128945,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS17690;old_locus_tag=CCO35_17680;partial=true;pseudo=true NZ_NPME01000005.1 Protein Homology CDS 128610 128945 . + 0 ID=cds-CCO35_RS17690;Parent=gene-CCO35_RS17690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=128945,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384783.1;locus_tag=CCO35_RS17690;partial=true;product=ATPase;pseudo=true;transl_table=11 NZ_NPME01000005.1 RefSeq gene 129013 129552 . - . ID=gene-CCO35_RS17695;Name=CCO35_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17695;old_locus_tag=CCO35_17685 NZ_NPME01000005.1 Protein Homology CDS 129013 129552 . - 0 ID=cds-WP_000755795.1;Parent=gene-CCO35_RS17695;Dbxref=GenBank:WP_000755795.1;Name=WP_000755795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755162.1;locus_tag=CCO35_RS17695;product=DUF5384 family protein;protein_id=WP_000755795.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 129568 130083 . - . ID=gene-CCO35_RS17700;Name=CCO35_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17700;old_locus_tag=CCO35_17690 NZ_NPME01000005.1 Protein Homology CDS 129568 130083 . - 0 ID=cds-WP_001009636.1;Parent=gene-CCO35_RS17700;Dbxref=GenBank:WP_001009636.1;Name=WP_001009636.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311394.2;locus_tag=CCO35_RS17700;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001009636.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 130312 130503 . - . ID=gene-CCO35_RS17705;Name=CCO35_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17705;old_locus_tag=CCO35_17695 NZ_NPME01000005.1 Protein Homology CDS 130312 130503 . - 0 ID=cds-WP_000075924.1;Parent=gene-CCO35_RS17705;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=CCO35_RS17705;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 130682 130819 . + . ID=gene-CCO35_RS17710;Name=CCO35_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17710;old_locus_tag=CCO35_17700 NZ_NPME01000005.1 Protein Homology CDS 130682 130819 . + 0 ID=cds-WP_001581698.1;Parent=gene-CCO35_RS17710;Dbxref=GenBank:WP_001581698.1;Name=WP_001581698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=CCO35_RS17710;product=hypothetical protein;protein_id=WP_001581698.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 130916 133129 . + . ID=gene-CCO35_RS17715;Name=CCO35_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17715;old_locus_tag=CCO35_17705 NZ_NPME01000005.1 Protein Homology CDS 130916 133129 . + 0 ID=cds-WP_031568524.1;Parent=gene-CCO35_RS17715;Dbxref=GenBank:WP_031568524.1;Name=WP_031568524.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=CCO35_RS17715;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_031568524.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 133165 134706 . - . ID=gene-CCO35_RS17720;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CCO35_RS17720;old_locus_tag=CCO35_17710 NZ_NPME01000005.1 Protein Homology CDS 133165 134706 . - 0 ID=cds-WP_001123324.1;Parent=gene-CCO35_RS17720;Dbxref=GenBank:WP_001123324.1;Name=WP_001123324.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=CCO35_RS17720;product=exopolyphosphatase;protein_id=WP_001123324.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 134711 136777 . - . ID=gene-CCO35_RS17725;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=CCO35_RS17725;old_locus_tag=CCO35_17715 NZ_NPME01000005.1 Protein Homology CDS 134711 136777 . - 0 ID=cds-WP_000529555.1;Parent=gene-CCO35_RS17725;Dbxref=GenBank:WP_000529555.1;Name=WP_000529555.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=CCO35_RS17725;product=polyphosphate kinase 1;protein_id=WP_000529555.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 136966 137604 . - . ID=gene-CCO35_RS17730;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CCO35_RS17730;old_locus_tag=CCO35_17720 NZ_NPME01000005.1 Protein Homology CDS 136966 137604 . - 0 ID=cds-WP_001028588.1;Parent=gene-CCO35_RS17730;Dbxref=GenBank:WP_001028588.1;Name=WP_001028588.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=CCO35_RS17730;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028588.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 137604 138641 . - . ID=gene-CCO35_RS17735;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CCO35_RS17735;old_locus_tag=CCO35_17725 NZ_NPME01000005.1 Protein Homology CDS 137604 138641 . - 0 ID=cds-WP_094965373.1;Parent=gene-CCO35_RS17735;Dbxref=GenBank:WP_094965373.1;Name=WP_094965373.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=CCO35_RS17735;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_094965373.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 139055 139681 . + . ID=gene-CCO35_RS17740;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CCO35_RS17740;old_locus_tag=CCO35_17730 NZ_NPME01000005.1 Protein Homology CDS 139055 139681 . + 0 ID=cds-WP_000706208.1;Parent=gene-CCO35_RS17740;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=CCO35_RS17740;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 139769 141058 . + . ID=gene-CCO35_RS17745;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=CCO35_RS17745;old_locus_tag=CCO35_17735 NZ_NPME01000005.1 Protein Homology CDS 139769 141058 . + 0 ID=cds-WP_000198346.1;Parent=gene-CCO35_RS17745;Dbxref=GenBank:WP_000198346.1;Name=WP_000198346.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=CCO35_RS17745;product=uracil permease;protein_id=WP_000198346.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 141153 141854 . + . ID=gene-CCO35_RS17750;Name=CCO35_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17750;old_locus_tag=CCO35_17740 NZ_NPME01000005.1 Protein Homology CDS 141153 141854 . + 0 ID=cds-WP_061835882.1;Parent=gene-CCO35_RS17750;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=CCO35_RS17750;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 141881 142240 . - . ID=gene-CCO35_RS17755;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CCO35_RS17755;old_locus_tag=CCO35_17745 NZ_NPME01000005.1 Protein Homology CDS 141881 142240 . - 0 ID=cds-WP_000132650.1;Parent=gene-CCO35_RS17755;Dbxref=GenBank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=CCO35_RS17755;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 142280 143743 . - . ID=gene-CCO35_RS17760;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=CCO35_RS17760;old_locus_tag=CCO35_17750 NZ_NPME01000005.1 Protein Homology CDS 142280 143743 . - 0 ID=cds-WP_000489631.1;Parent=gene-CCO35_RS17760;Dbxref=GenBank:WP_000489631.1;Name=WP_000489631.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=CCO35_RS17760;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489631.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 143951 145018 . + . ID=gene-CCO35_RS17765;Name=CCO35_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17765;old_locus_tag=CCO35_17755 NZ_NPME01000005.1 Protein Homology CDS 143951 145018 . + 0 ID=cds-WP_000892056.1;Parent=gene-CCO35_RS17765;Dbxref=GenBank:WP_000892056.1;Name=WP_000892056.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=CCO35_RS17765;product=AI-2E family transporter;protein_id=WP_000892056.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 145294 146481 . + . ID=gene-CCO35_RS17770;Name=CCO35_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17770;old_locus_tag=CCO35_17760 NZ_NPME01000005.1 Protein Homology CDS 145294 146481 . + 0 ID=cds-WP_001533732.1;Parent=gene-CCO35_RS17770;Dbxref=GenBank:WP_001533732.1;Name=WP_001533732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=CCO35_RS17770;product=sugar diacid recognition domain-containing protein;protein_id=WP_001533732.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 146549 147817 . + . ID=gene-CCO35_RS17775;Name=CCO35_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17775;old_locus_tag=CCO35_17765 NZ_NPME01000005.1 Protein Homology CDS 146549 147817 . + 0 ID=cds-WP_000200859.1;Parent=gene-CCO35_RS17775;Dbxref=GenBank:WP_000200859.1;Name=WP_000200859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=CCO35_RS17775;product=GntP family permease;protein_id=WP_000200859.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 147823 148962 . + . ID=gene-CCO35_RS17780;Name=CCO35_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17780;old_locus_tag=CCO35_17770 NZ_NPME01000005.1 Protein Homology CDS 147823 148962 . + 0 ID=cds-WP_000706384.1;Parent=gene-CCO35_RS17780;Dbxref=GenBank:WP_000706384.1;Name=WP_000706384.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=CCO35_RS17780;product=glycerate kinase;protein_id=WP_000706384.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 149009 149479 . - . ID=gene-CCO35_RS17785;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CCO35_RS17785;old_locus_tag=CCO35_17775 NZ_NPME01000005.1 Protein Homology CDS 149009 149479 . - 0 ID=cds-WP_001068686.1;Parent=gene-CCO35_RS17785;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=CCO35_RS17785;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 149479 150051 . - . ID=gene-CCO35_RS17790;Name=CCO35_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17790;old_locus_tag=CCO35_17780 NZ_NPME01000005.1 Protein Homology CDS 149479 150051 . - 0 ID=cds-WP_000189061.1;Parent=gene-CCO35_RS17790;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=CCO35_RS17790;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 150197 151075 . + . ID=gene-CCO35_RS17795;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CCO35_RS17795;old_locus_tag=CCO35_17785 NZ_NPME01000005.1 Protein Homology CDS 150197 151075 . + 0 ID=cds-WP_000494020.1;Parent=gene-CCO35_RS17795;Dbxref=GenBank:WP_000494020.1;Name=WP_000494020.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=CCO35_RS17795;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494020.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 151092 152126 . + . ID=gene-CCO35_RS17800;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=CCO35_RS17800;old_locus_tag=CCO35_17790 NZ_NPME01000005.1 Protein Homology CDS 151092 152126 . + 0 ID=cds-WP_000331877.1;Parent=gene-CCO35_RS17800;Dbxref=GenBank:WP_000331877.1;Name=WP_000331877.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=CCO35_RS17800;product=outer membrane protein assembly factor BamC;protein_id=WP_000331877.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 152301 153014 . + . ID=gene-CCO35_RS17805;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CCO35_RS17805;old_locus_tag=CCO35_17795 NZ_NPME01000005.1 Protein Homology CDS 152301 153014 . + 0 ID=cds-WP_001171630.1;Parent=gene-CCO35_RS17805;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=CCO35_RS17805;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 153145 154008 . + . ID=gene-CCO35_RS17810;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=CCO35_RS17810;old_locus_tag=CCO35_17800 NZ_NPME01000005.1 Protein Homology CDS 153145 154008 . + 0 ID=cds-WP_001267519.1;Parent=gene-CCO35_RS17810;Dbxref=GenBank:WP_001267519.1;Name=WP_001267519.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=CCO35_RS17810;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267519.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 154024 156042 . + . ID=gene-CCO35_RS17815;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=CCO35_RS17815;old_locus_tag=CCO35_17805 NZ_NPME01000005.1 Protein Homology CDS 154024 156042 . + 0 ID=cds-WP_001528597.1;Parent=gene-CCO35_RS17815;Dbxref=GenBank:WP_001528597.1;Name=WP_001528597.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=CCO35_RS17815;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_001528597.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 156069 156269 . - . ID=gene-CCO35_RS17820;Name=CCO35_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17820;old_locus_tag=CCO35_17810 NZ_NPME01000005.1 Protein Homology CDS 156069 156269 . - 0 ID=cds-WP_000383842.1;Parent=gene-CCO35_RS17820;Dbxref=GenBank:WP_000383842.1;Name=WP_000383842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=CCO35_RS17820;product=YpfN family protein;protein_id=WP_000383842.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 156297 157424 . - . ID=gene-CCO35_RS17825;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=CCO35_RS17825;old_locus_tag=CCO35_17815 NZ_NPME01000005.1 Protein Homology CDS 156297 157424 . - 0 ID=cds-WP_001528672.1;Parent=gene-CCO35_RS17825;Dbxref=GenBank:WP_001528672.1;Name=WP_001528672.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=CCO35_RS17825;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001528672.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 157428 157784 . - . ID=gene-CCO35_RS17830;Name=CCO35_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17830;old_locus_tag=CCO35_17820 NZ_NPME01000005.1 Protein Homology CDS 157428 157784 . - 0 ID=cds-WP_000631923.1;Parent=gene-CCO35_RS17830;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=CCO35_RS17830;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 158197 158256 . + . ID=gene-CCO35_RS23725;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=CCO35_RS23725 NZ_NPME01000005.1 Protein Homology CDS 158197 158256 . + 0 ID=cds-WP_001386977.1;Parent=gene-CCO35_RS23725;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=CCO35_RS23725;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 158358 161471 . - . ID=gene-CCO35_RS17835;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=CCO35_RS17835;old_locus_tag=CCO35_17825 NZ_NPME01000005.1 Protein Homology CDS 158358 161471 . - 0 ID=cds-WP_001263076.1;Parent=gene-CCO35_RS17835;Dbxref=GenBank:WP_001263076.1;Name=WP_001263076.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=CCO35_RS17835;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001263076.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 161656 163356 . - . ID=gene-CCO35_RS17840;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=CCO35_RS17840;old_locus_tag=CCO35_17830 NZ_NPME01000005.1 Protein Homology CDS 161656 163356 . - 0 ID=cds-WP_000216815.1;Parent=gene-CCO35_RS17840;Dbxref=GenBank:WP_000216815.1;Name=WP_000216815.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=CCO35_RS17840;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000216815.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 163542 165503 . + . ID=gene-CCO35_RS17845;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=CCO35_RS17845;old_locus_tag=CCO35_17835 NZ_NPME01000005.1 Protein Homology CDS 163542 165503 . + 0 ID=cds-WP_001078935.1;Parent=gene-CCO35_RS17845;Dbxref=GenBank:WP_001078935.1;Name=WP_001078935.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=CCO35_RS17845;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078935.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 165952 167250 . - . ID=gene-CCO35_RS17850;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=CCO35_RS17850;old_locus_tag=CCO35_17840 NZ_NPME01000005.1 Protein Homology CDS 165952 167250 . - 0 ID=cds-WP_000673297.1;Parent=gene-CCO35_RS17850;Dbxref=GenBank:WP_000673297.1;Name=WP_000673297.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=CCO35_RS17850;product=penicillin binding protein PBP4B;protein_id=WP_000673297.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 167454 168029 . + . ID=gene-CCO35_RS17855;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=CCO35_RS17855;old_locus_tag=CCO35_17845 NZ_NPME01000005.1 Protein Homology CDS 167454 168029 . + 0 ID=cds-WP_000084037.1;Parent=gene-CCO35_RS17855;Dbxref=GenBank:WP_000084037.1;Name=WP_000084037.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=CCO35_RS17855;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084037.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 168154 169197 . + . ID=gene-CCO35_RS17860;Name=CCO35_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17860;old_locus_tag=CCO35_17850 NZ_NPME01000005.1 Protein Homology CDS 168154 169197 . + 0 ID=cds-WP_001270668.1;Parent=gene-CCO35_RS17860;Dbxref=GenBank:WP_001270668.1;Name=WP_001270668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=CCO35_RS17860;product=DUF1176 domain-containing protein;protein_id=WP_001270668.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 169325 169555 . + . ID=gene-CCO35_RS17865;Name=CCO35_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17865;old_locus_tag=CCO35_17855 NZ_NPME01000005.1 Protein Homology CDS 169325 169555 . + 0 ID=cds-WP_000700635.1;Parent=gene-CCO35_RS17865;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=CCO35_RS17865;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 169618 171618 . - . ID=gene-CCO35_RS17870;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO35_RS17870;old_locus_tag=CCO35_17860 NZ_NPME01000005.1 Protein Homology CDS 169618 171618 . - 0 ID=cds-WP_000087326.1;Parent=gene-CCO35_RS17870;Dbxref=GenBank:WP_000087326.1;Name=WP_000087326.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=CCO35_RS17870;product=transketolase;protein_id=WP_000087326.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 171638 172588 . - . ID=gene-CCO35_RS17875;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO35_RS17875;old_locus_tag=CCO35_17865 NZ_NPME01000005.1 Protein Homology CDS 171638 172588 . - 0 ID=cds-WP_001072443.1;Parent=gene-CCO35_RS17875;Dbxref=GenBank:WP_001072443.1;Name=WP_001072443.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=CCO35_RS17875;product=transaldolase;protein_id=WP_001072443.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 172860 175139 . + . ID=gene-CCO35_RS17885;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=CCO35_RS17885;old_locus_tag=CCO35_17875 NZ_NPME01000005.1 Protein Homology CDS 172860 175139 . + 0 ID=cds-WP_000344299.1;Parent=gene-CCO35_RS17885;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=CCO35_RS17885;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 175556 175891 . + . ID=gene-CCO35_RS17890;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=CCO35_RS17890;old_locus_tag=CCO35_17880 NZ_NPME01000005.1 Protein Homology CDS 175556 175891 . + 0 ID=cds-WP_001031445.1;Parent=gene-CCO35_RS17890;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=CCO35_RS17890;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 175904 176383 . + . ID=gene-CCO35_RS17895;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=CCO35_RS17895;old_locus_tag=CCO35_17885 NZ_NPME01000005.1 Protein Homology CDS 175904 176383 . + 0 ID=cds-WP_000820751.1;Parent=gene-CCO35_RS17895;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=CCO35_RS17895;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 176361 177050 . + . ID=gene-CCO35_RS17900;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=CCO35_RS17900;old_locus_tag=CCO35_17890 NZ_NPME01000005.1 Protein Homology CDS 176361 177050 . + 0 ID=cds-WP_000733867.1;Parent=gene-CCO35_RS17900;Dbxref=GenBank:WP_000733867.1;Name=WP_000733867.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=CCO35_RS17900;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733867.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 177047 177850 . + . ID=gene-CCO35_RS17905;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=CCO35_RS17905;old_locus_tag=CCO35_17895 NZ_NPME01000005.1 Protein Homology CDS 177047 177850 . + 0 ID=cds-WP_000997661.1;Parent=gene-CCO35_RS17905;Dbxref=GenBank:WP_000997661.1;Name=WP_000997661.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=CCO35_RS17905;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997661.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 177847 178863 . + . ID=gene-CCO35_RS17910;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO35_RS17910;old_locus_tag=CCO35_17900 NZ_NPME01000005.1 Protein Homology CDS 177847 178863 . + 0 ID=cds-WP_023203689.1;Parent=gene-CCO35_RS17910;Dbxref=GenBank:WP_023203689.1;Name=WP_023203689.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=CCO35_RS17910;product=phosphate acetyltransferase;protein_id=WP_023203689.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 178904 179194 . + . ID=gene-CCO35_RS17915;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=CCO35_RS17915;old_locus_tag=CCO35_17905 NZ_NPME01000005.1 Protein Homology CDS 178904 179194 . + 0 ID=cds-WP_000387716.1;Parent=gene-CCO35_RS17915;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=CCO35_RS17915;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 179307 179594 . + . ID=gene-CCO35_RS17920;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=CCO35_RS17920;old_locus_tag=CCO35_17910 NZ_NPME01000005.1 Protein Homology CDS 179307 179594 . + 0 ID=cds-WP_001522340.1;Parent=gene-CCO35_RS17920;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=CCO35_RS17920;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 179606 181009 . + . ID=gene-CCO35_RS17925;Name=CCO35_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17925;old_locus_tag=CCO35_17915 NZ_NPME01000005.1 Protein Homology CDS 179606 181009 . + 0 ID=cds-WP_001075640.1;Parent=gene-CCO35_RS17925;Dbxref=GenBank:WP_001075640.1;Name=WP_001075640.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=CCO35_RS17925;product=aldehyde dehydrogenase family protein;protein_id=WP_001075640.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 181020 181859 . + . ID=gene-CCO35_RS17930;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=CCO35_RS17930;old_locus_tag=CCO35_17920 NZ_NPME01000005.1 Protein Homology CDS 181020 181859 . + 0 ID=cds-WP_000929675.1;Parent=gene-CCO35_RS17930;Dbxref=GenBank:WP_000929675.1;Name=WP_000929675.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=CCO35_RS17930;product=ethanolamine utilization protein EutJ;protein_id=WP_000929675.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 181849 183036 . + . ID=gene-CCO35_RS17935;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=CCO35_RS17935;old_locus_tag=CCO35_17925 NZ_NPME01000005.1 Protein Homology CDS 181849 183036 . + 0 ID=cds-WP_001147505.1;Parent=gene-CCO35_RS17935;Dbxref=GenBank:WP_001147505.1;Name=WP_001147505.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=CCO35_RS17935;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147505.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 183156 184382 . + . ID=gene-CCO35_RS17940;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=CCO35_RS17940;old_locus_tag=CCO35_17930 NZ_NPME01000005.1 Protein Homology CDS 183156 184382 . + 0 ID=cds-WP_000512357.1;Parent=gene-CCO35_RS17940;Dbxref=GenBank:WP_000512357.1;Name=WP_000512357.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=CCO35_RS17940;product=ethanolamine utilization protein EutH;protein_id=WP_000512357.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 184379 185782 . + . ID=gene-CCO35_RS17945;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=CCO35_RS17945;old_locus_tag=CCO35_17935 NZ_NPME01000005.1 Protein Homology CDS 184379 185782 . + 0 ID=cds-WP_023223129.1;Parent=gene-CCO35_RS17945;Dbxref=GenBank:WP_023223129.1;Name=WP_023223129.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=CCO35_RS17945;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_023223129.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 185794 187155 . + . ID=gene-CCO35_RS17950;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=CCO35_RS17950;old_locus_tag=CCO35_17940 NZ_NPME01000005.1 Protein Homology CDS 185794 187155 . + 0 ID=cds-WP_000769990.1;Parent=gene-CCO35_RS17950;Dbxref=GenBank:WP_000769990.1;Name=WP_000769990.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=CCO35_RS17950;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769990.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 187174 188070 . + . ID=gene-CCO35_RS17955;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=CCO35_RS17955;old_locus_tag=CCO35_17945 NZ_NPME01000005.1 Protein Homology CDS 187174 188070 . + 0 ID=cds-WP_000372354.1;Parent=gene-CCO35_RS17955;Dbxref=GenBank:WP_000372354.1;Name=WP_000372354.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=CCO35_RS17955;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372354.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 188080 188739 . + . ID=gene-CCO35_RS17960;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=CCO35_RS17960;old_locus_tag=CCO35_17950 NZ_NPME01000005.1 Protein Homology CDS 188080 188739 . + 0 ID=cds-WP_001111054.1;Parent=gene-CCO35_RS17960;Dbxref=GenBank:WP_001111054.1;Name=WP_001111054.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=CCO35_RS17960;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111054.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 188752 189246 . + . ID=gene-CCO35_RS17965;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=CCO35_RS17965;old_locus_tag=CCO35_17955 NZ_NPME01000005.1 Protein Homology CDS 188752 189246 . + 0 ID=cds-WP_001528533.1;Parent=gene-CCO35_RS17965;Dbxref=GenBank:WP_001528533.1;Name=WP_001528533.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=CCO35_RS17965;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_001528533.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 189294 190346 . + . ID=gene-CCO35_RS17970;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=CCO35_RS17970;old_locus_tag=CCO35_17960 NZ_NPME01000005.1 Protein Homology CDS 189294 190346 . + 0 ID=cds-WP_000753665.1;Parent=gene-CCO35_RS17970;Dbxref=GenBank:WP_000753665.1;Name=WP_000753665.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=CCO35_RS17970;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753665.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 190446 191345 . - . ID=gene-CCO35_RS17975;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=CCO35_RS17975;old_locus_tag=CCO35_17965 NZ_NPME01000005.1 Protein Homology CDS 190446 191345 . - 0 ID=cds-WP_001528668.1;Parent=gene-CCO35_RS17975;Dbxref=GenBank:WP_001528668.1;Name=WP_001528668.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=CCO35_RS17975;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_001528668.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 191348 192217 . - . ID=gene-CCO35_RS17980;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=CCO35_RS17980;old_locus_tag=CCO35_17970 NZ_NPME01000005.1 Protein Homology CDS 191348 192217 . - 0 ID=cds-WP_000102880.1;Parent=gene-CCO35_RS17980;Dbxref=GenBank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=CCO35_RS17980;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 192430 192855 . + . ID=gene-CCO35_RS17985;Name=CCO35_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17985;old_locus_tag=CCO35_17975 NZ_NPME01000005.1 Protein Homology CDS 192430 192855 . + 0 ID=cds-WP_000406008.1;Parent=gene-CCO35_RS17985;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=CCO35_RS17985;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 192842 193291 . + . ID=gene-CCO35_RS17990;Name=CCO35_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17990;old_locus_tag=CCO35_17980 NZ_NPME01000005.1 Protein Homology CDS 192842 193291 . + 0 ID=cds-WP_000842940.1;Parent=gene-CCO35_RS17990;Dbxref=GenBank:WP_000842940.1;Name=WP_000842940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=CCO35_RS17990;product=DUF2919 domain-containing protein;protein_id=WP_000842940.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 193353 193928 . + . ID=gene-CCO35_RS17995;Name=CCO35_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS17995;old_locus_tag=CCO35_17985 NZ_NPME01000005.1 Protein Homology CDS 193353 193928 . + 0 ID=cds-WP_000838971.1;Parent=gene-CCO35_RS17995;Dbxref=GenBank:WP_000838971.1;Name=WP_000838971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=CCO35_RS17995;product=RpoE-regulated lipoprotein;protein_id=WP_000838971.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 194023 194922 . + . ID=gene-CCO35_RS18000;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=CCO35_RS18000;old_locus_tag=CCO35_17990 NZ_NPME01000005.1 Protein Homology CDS 194023 194922 . + 0 ID=cds-WP_000084583.1;Parent=gene-CCO35_RS18000;Dbxref=GenBank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=CCO35_RS18000;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 195160 195951 . + . ID=gene-CCO35_RS18005;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=CCO35_RS18005;old_locus_tag=CCO35_17995 NZ_NPME01000005.1 Protein Homology CDS 195160 195951 . + 0 ID=cds-WP_000517460.1;Parent=gene-CCO35_RS18005;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=CCO35_RS18005;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 196109 197125 . + . ID=gene-CCO35_RS18010;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=CCO35_RS18010;old_locus_tag=CCO35_18000 NZ_NPME01000005.1 Protein Homology CDS 196109 197125 . + 0 ID=cds-WP_000290285.1;Parent=gene-CCO35_RS18010;Dbxref=GenBank:WP_000290285.1;Name=WP_000290285.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=CCO35_RS18010;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290285.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 197125 197958 . + . ID=gene-CCO35_RS18015;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=CCO35_RS18015;old_locus_tag=CCO35_18005 NZ_NPME01000005.1 Protein Homology CDS 197125 197958 . + 0 ID=cds-WP_000881745.1;Parent=gene-CCO35_RS18015;Dbxref=GenBank:WP_000881745.1;Name=WP_000881745.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=CCO35_RS18015;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881745.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 197958 198833 . + . ID=gene-CCO35_RS18020;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=CCO35_RS18020;old_locus_tag=CCO35_18010 NZ_NPME01000005.1 Protein Homology CDS 197958 198833 . + 0 ID=cds-WP_000852705.1;Parent=gene-CCO35_RS18020;Dbxref=GenBank:WP_000852705.1;Name=WP_000852705.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=CCO35_RS18020;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852705.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 198823 199920 . + . ID=gene-CCO35_RS18025;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=CCO35_RS18025;old_locus_tag=CCO35_18015 NZ_NPME01000005.1 Protein Homology CDS 198823 199920 . + 0 ID=cds-WP_000021076.1;Parent=gene-CCO35_RS18025;Dbxref=GenBank:WP_000021076.1;Name=WP_000021076.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=CCO35_RS18025;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021076.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 200041 200952 . + . ID=gene-CCO35_RS18030;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=CCO35_RS18030;old_locus_tag=CCO35_18020 NZ_NPME01000005.1 Protein Homology CDS 200041 200952 . + 0 ID=cds-WP_001093873.1;Parent=gene-CCO35_RS18030;Dbxref=GenBank:WP_001093873.1;Name=WP_001093873.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=CCO35_RS18030;product=cysteine synthase CysM;protein_id=WP_001093873.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 200985 201362 . - . ID=gene-CCO35_RS18035;Name=CCO35_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18035;old_locus_tag=CCO35_18025 NZ_NPME01000005.1 Protein Homology CDS 200985 201362 . - 0 ID=cds-WP_000710726.1;Parent=gene-CCO35_RS18035;Dbxref=GenBank:WP_000710726.1;Name=WP_000710726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710726.1;locus_tag=CCO35_RS18035;product=YfeK family protein;protein_id=WP_000710726.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 201421 202140 . - . ID=gene-CCO35_RS18040;Name=CCO35_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18040;old_locus_tag=CCO35_18030 NZ_NPME01000005.1 Protein Homology CDS 201421 202140 . - 0 ID=cds-WP_001263755.1;Parent=gene-CCO35_RS18040;Dbxref=GenBank:WP_001263755.1;Name=WP_001263755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=CCO35_RS18040;product=GMP synthase;protein_id=WP_001263755.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 202155 203447 . - . ID=gene-CCO35_RS18045;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=CCO35_RS18045;old_locus_tag=CCO35_18035 NZ_NPME01000005.1 Protein Homology CDS 202155 203447 . - 0 ID=cds-WP_000565101.1;Parent=gene-CCO35_RS18045;Dbxref=GenBank:WP_000565101.1;Name=WP_000565101.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=CCO35_RS18045;product=transcriptional regulator PtsJ;protein_id=WP_000565101.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 203530 204396 . + . ID=gene-CCO35_RS18050;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=CCO35_RS18050;old_locus_tag=CCO35_18040 NZ_NPME01000005.1 Protein Homology CDS 203530 204396 . + 0 ID=cds-WP_000529601.1;Parent=gene-CCO35_RS18050;Dbxref=GenBank:WP_000529601.1;Name=WP_000529601.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=CCO35_RS18050;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000529601.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 204393 204632 . + . ID=gene-CCO35_RS18055;Name=CCO35_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18055;old_locus_tag=CCO35_18045 NZ_NPME01000005.1 Protein Homology CDS 204393 204632 . + 0 ID=cds-WP_000844541.1;Parent=gene-CCO35_RS18055;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=CCO35_RS18055;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 204782 205291 . - . ID=gene-CCO35_RS18060;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=CCO35_RS18060;old_locus_tag=CCO35_18050 NZ_NPME01000005.1 Protein Homology CDS 204782 205291 . - 0 ID=cds-WP_000522253.1;Parent=gene-CCO35_RS18060;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=CCO35_RS18060;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 205332 207059 . - . ID=gene-CCO35_RS18065;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=CCO35_RS18065;old_locus_tag=CCO35_18055 NZ_NPME01000005.1 Protein Homology CDS 205332 207059 . - 0 ID=cds-WP_000623118.1;Parent=gene-CCO35_RS18065;Dbxref=GenBank:WP_000623118.1;Name=WP_000623118.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=CCO35_RS18065;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623118.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 207108 207365 . - . ID=gene-CCO35_RS18070;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=CCO35_RS18070;old_locus_tag=CCO35_18060 NZ_NPME01000005.1 Protein Homology CDS 207108 207365 . - 0 ID=cds-WP_000487600.1;Parent=gene-CCO35_RS18070;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=CCO35_RS18070;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 207749 208720 . - . ID=gene-CCO35_RS18075;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CCO35_RS18075;old_locus_tag=CCO35_18065 NZ_NPME01000005.1 Protein Homology CDS 207749 208720 . - 0 ID=cds-WP_000036904.1;Parent=gene-CCO35_RS18075;Dbxref=GenBank:WP_000036904.1;Name=WP_000036904.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=CCO35_RS18075;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 208884 209645 . - . ID=gene-CCO35_RS18080;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=CCO35_RS18080;old_locus_tag=CCO35_18070 NZ_NPME01000005.1 Protein Homology CDS 208884 209645 . - 0 ID=cds-WP_000255008.1;Parent=gene-CCO35_RS18080;Dbxref=GenBank:WP_000255008.1;Name=WP_000255008.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=CCO35_RS18080;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 209877 210863 . + . ID=gene-CCO35_RS18085;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=CCO35_RS18085;old_locus_tag=CCO35_18075 NZ_NPME01000005.1 Protein Homology CDS 209877 210863 . + 0 ID=cds-WP_000983115.1;Parent=gene-CCO35_RS18085;Dbxref=GenBank:WP_000983115.1;Name=WP_000983115.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=CCO35_RS18085;product=cell division protein ZipA;protein_id=WP_000983115.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 210935 212950 . + . ID=gene-CCO35_RS18090;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CCO35_RS18090;old_locus_tag=CCO35_18080 NZ_NPME01000005.1 Protein Homology CDS 210935 212950 . + 0 ID=cds-WP_000433270.1;Parent=gene-CCO35_RS18090;Dbxref=GenBank:WP_000433270.1;Name=WP_000433270.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=CCO35_RS18090;product=NAD-dependent DNA ligase LigA;protein_id=WP_000433270.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 212952 213170 . + . ID=gene-CCO35_RS18095;Name=CCO35_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18095;old_locus_tag=CCO35_18085 NZ_NPME01000005.1 Protein Homology CDS 212952 213170 . + 0 ID=cds-WP_001519708.1;Parent=gene-CCO35_RS18095;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=CCO35_RS18095;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 213167 214165 . - . ID=gene-CCO35_RS18100;Name=CCO35_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18100;old_locus_tag=CCO35_18090 NZ_NPME01000005.1 Protein Homology CDS 213167 214165 . - 0 ID=cds-WP_031568598.1;Parent=gene-CCO35_RS18100;Dbxref=GenBank:WP_031568598.1;Name=WP_031568598.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=CCO35_RS18100;product=bile acid:sodium symporter family protein;protein_id=WP_031568598.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 214255 215181 . + . ID=gene-CCO35_RS18105;Name=CCO35_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18105;old_locus_tag=CCO35_18095 NZ_NPME01000005.1 Protein Homology CDS 214255 215181 . + 0 ID=cds-WP_001109838.1;Parent=gene-CCO35_RS18105;Dbxref=GenBank:WP_001109838.1;Name=WP_001109838.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=CCO35_RS18105;product=LysR family transcriptional regulator;protein_id=WP_001109838.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 215243 216004 . - . ID=gene-CCO35_RS18110;Name=CCO35_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18110;old_locus_tag=CCO35_18100 NZ_NPME01000005.1 Protein Homology CDS 215243 216004 . - 0 ID=cds-WP_031568601.1;Parent=gene-CCO35_RS18110;Dbxref=GenBank:WP_031568601.1;Name=WP_031568601.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=CCO35_RS18110;product=outer membrane protein OmpK;protein_id=WP_031568601.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 216260 217093 . + . ID=gene-CCO35_RS18115;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=CCO35_RS18115;old_locus_tag=CCO35_18105 NZ_NPME01000005.1 Protein Homology CDS 216260 217093 . + 0 ID=cds-WP_001119756.1;Parent=gene-CCO35_RS18115;Dbxref=GenBank:WP_001119756.1;Name=WP_001119756.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=CCO35_RS18115;product=xanthosine phosphorylase;protein_id=WP_001119756.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 217148 218404 . + . ID=gene-CCO35_RS18120;Name=CCO35_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18120;old_locus_tag=CCO35_18110 NZ_NPME01000005.1 Protein Homology CDS 217148 218404 . + 0 ID=cds-WP_000513241.1;Parent=gene-CCO35_RS18120;Dbxref=GenBank:WP_000513241.1;Name=WP_000513241.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=CCO35_RS18120;product=nucleoside permease;protein_id=WP_000513241.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 218463 218621 . + . ID=gene-CCO35_RS18125;Name=CCO35_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18125;old_locus_tag=CCO35_18115 NZ_NPME01000005.1 Protein Homology CDS 218463 218621 . + 0 ID=cds-WP_000658727.1;Parent=gene-CCO35_RS18125;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=CCO35_RS18125;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 218673 219557 . + . ID=gene-CCO35_RS18130;Name=CCO35_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18130;old_locus_tag=CCO35_18120 NZ_NPME01000005.1 Protein Homology CDS 218673 219557 . + 0 ID=cds-WP_001528551.1;Parent=gene-CCO35_RS18130;Dbxref=GenBank:WP_001528551.1;Name=WP_001528551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=CCO35_RS18130;product=LysR family transcriptional regulator;protein_id=WP_001528551.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 219875 219950 . - . ID=gene-CCO35_RS18135;Name=CCO35_RS18135;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS18135;old_locus_tag=CCO35_18125 NZ_NPME01000005.1 tRNAscan-SE tRNA 219875 219950 . - . ID=rna-CCO35_RS18135;Parent=gene-CCO35_RS18135;anticodon=(pos:complement(219915..219917));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18135;product=tRNA-Lys NZ_NPME01000005.1 tRNAscan-SE exon 219875 219950 . - . ID=exon-CCO35_RS18135-1;Parent=rna-CCO35_RS18135;anticodon=(pos:complement(219915..219917));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18135;product=tRNA-Lys NZ_NPME01000005.1 RefSeq gene 219955 220030 . - . ID=gene-CCO35_RS18140;Name=CCO35_RS18140;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS18140;old_locus_tag=CCO35_18130 NZ_NPME01000005.1 tRNAscan-SE tRNA 219955 220030 . - . ID=rna-CCO35_RS18140;Parent=gene-CCO35_RS18140;anticodon=(pos:complement(219995..219997));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18140;product=tRNA-Val NZ_NPME01000005.1 tRNAscan-SE exon 219955 220030 . - . ID=exon-CCO35_RS18140-1;Parent=rna-CCO35_RS18140;anticodon=(pos:complement(219995..219997));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18140;product=tRNA-Val NZ_NPME01000005.1 RefSeq gene 220072 220147 . - . ID=gene-CCO35_RS18145;Name=CCO35_RS18145;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS18145;old_locus_tag=CCO35_18135 NZ_NPME01000005.1 tRNAscan-SE tRNA 220072 220147 . - . ID=rna-CCO35_RS18145;Parent=gene-CCO35_RS18145;anticodon=(pos:complement(220112..220114));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18145;product=tRNA-Val NZ_NPME01000005.1 tRNAscan-SE exon 220072 220147 . - . ID=exon-CCO35_RS18145-1;Parent=rna-CCO35_RS18145;anticodon=(pos:complement(220112..220114));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18145;product=tRNA-Val NZ_NPME01000005.1 RefSeq gene 220193 220268 . - . ID=gene-CCO35_RS18150;Name=CCO35_RS18150;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS18150;old_locus_tag=CCO35_18140 NZ_NPME01000005.1 tRNAscan-SE tRNA 220193 220268 . - . ID=rna-CCO35_RS18150;Parent=gene-CCO35_RS18150;anticodon=(pos:complement(220233..220235));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18150;product=tRNA-Val NZ_NPME01000005.1 tRNAscan-SE exon 220193 220268 . - . ID=exon-CCO35_RS18150-1;Parent=rna-CCO35_RS18150;anticodon=(pos:complement(220233..220235));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18150;product=tRNA-Val NZ_NPME01000005.1 RefSeq gene 220527 221942 . + . ID=gene-CCO35_RS18155;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CCO35_RS18155;old_locus_tag=CCO35_18145 NZ_NPME01000005.1 Protein Homology CDS 220527 221942 . + 0 ID=cds-WP_000695623.1;Parent=gene-CCO35_RS18155;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=CCO35_RS18155;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 221996 222388 . - . ID=gene-CCO35_RS18160;Name=CCO35_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18160;old_locus_tag=CCO35_18150 NZ_NPME01000005.1 Protein Homology CDS 221996 222388 . - 0 ID=cds-WP_000826514.1;Parent=gene-CCO35_RS18160;Dbxref=GenBank:WP_000826514.1;Name=WP_000826514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=CCO35_RS18160;product=MerR family transcriptional regulator;protein_id=WP_000826514.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 222390 222752 . - . ID=gene-CCO35_RS18165;Name=CCO35_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18165;old_locus_tag=CCO35_18155 NZ_NPME01000005.1 Protein Homology CDS 222390 222752 . - 0 ID=cds-WP_000472034.1;Parent=gene-CCO35_RS18165;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=CCO35_RS18165;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 222974 223049 . + . ID=gene-CCO35_RS18175;Name=CCO35_RS18175;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS18175;old_locus_tag=CCO35_18165 NZ_NPME01000005.1 tRNAscan-SE tRNA 222974 223049 . + . ID=rna-CCO35_RS18175;Parent=gene-CCO35_RS18175;anticodon=(pos:223007..223009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18175;product=tRNA-Ala NZ_NPME01000005.1 tRNAscan-SE exon 222974 223049 . + . ID=exon-CCO35_RS18175-1;Parent=rna-CCO35_RS18175;anticodon=(pos:223007..223009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18175;product=tRNA-Ala NZ_NPME01000005.1 RefSeq gene 223092 223167 . + . ID=gene-CCO35_RS18180;Name=CCO35_RS18180;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS18180;old_locus_tag=CCO35_18170 NZ_NPME01000005.1 tRNAscan-SE tRNA 223092 223167 . + . ID=rna-CCO35_RS18180;Parent=gene-CCO35_RS18180;anticodon=(pos:223125..223127);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18180;product=tRNA-Ala NZ_NPME01000005.1 tRNAscan-SE exon 223092 223167 . + . ID=exon-CCO35_RS18180-1;Parent=rna-CCO35_RS18180;anticodon=(pos:223125..223127);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18180;product=tRNA-Ala NZ_NPME01000005.1 RefSeq gene 223358 225547 . + . ID=gene-CCO35_RS18185;Name=CCO35_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18185;old_locus_tag=CCO35_18175 NZ_NPME01000005.1 Protein Homology CDS 223358 225547 . + 0 ID=cds-WP_001112937.1;Parent=gene-CCO35_RS18185;Dbxref=GenBank:WP_001112937.1;Name=WP_001112937.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=CCO35_RS18185;product=EAL domain-containing protein;protein_id=WP_001112937.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 225600 226802 . - . ID=gene-CCO35_RS18190;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=CCO35_RS18190;old_locus_tag=CCO35_18180 NZ_NPME01000005.1 Protein Homology CDS 225600 226802 . - 0 ID=cds-WP_000376343.1;Parent=gene-CCO35_RS18190;Dbxref=GenBank:WP_000376343.1;Name=WP_000376343.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=CCO35_RS18190;product=nucleoside permease NupC;protein_id=WP_000376343.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 227075 227152 . + . ID=gene-CCO35_RS24400;Name=CCO35_RS24400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24400 NZ_NPME01000005.1 Protein Homology CDS 227075 227152 . + 0 ID=cds-WP_419146551.1;Parent=gene-CCO35_RS24400;Dbxref=GenBank:WP_419146551.1;Name=WP_419146551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=CCO35_RS24400;product=hypothetical protein;protein_id=WP_419146551.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 227145 228386 . + . ID=gene-CCO35_RS18195;Name=CCO35_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18195;old_locus_tag=CCO35_18185 NZ_NPME01000005.1 Protein Homology CDS 227145 228386 . + 0 ID=cds-WP_094965369.1;Parent=gene-CCO35_RS18195;Dbxref=GenBank:WP_094965369.1;Name=WP_094965369.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=CCO35_RS18195;product=Nramp family divalent metal transporter;protein_id=WP_094965369.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 228447 228773 . - . ID=gene-CCO35_RS18200;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=CCO35_RS18200;old_locus_tag=CCO35_18190 NZ_NPME01000005.1 Protein Homology CDS 228447 228773 . - 0 ID=cds-WP_000490098.1;Parent=gene-CCO35_RS18200;Dbxref=GenBank:WP_000490098.1;Name=WP_000490098.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=CCO35_RS18200;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490098.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 228887 229885 . - . ID=gene-CCO35_RS18205;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CCO35_RS18205;old_locus_tag=CCO35_18195 NZ_NPME01000005.1 Protein Homology CDS 228887 229885 . - 0 ID=cds-WP_000640290.1;Parent=gene-CCO35_RS18205;Dbxref=GenBank:WP_000640290.1;Name=WP_000640290.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=CCO35_RS18205;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000640290.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 230065 231717 . + . ID=gene-CCO35_RS18210;Name=CCO35_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18210;old_locus_tag=CCO35_18200 NZ_NPME01000005.1 Protein Homology CDS 230065 231717 . + 0 ID=cds-WP_031569380.1;Parent=gene-CCO35_RS18210;Dbxref=GenBank:WP_031569380.1;Name=WP_031569380.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=CCO35_RS18210;product=alpha-keto acid decarboxylase family protein;protein_id=WP_031569380.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 231737 232972 . - . ID=gene-CCO35_RS18215;Name=CCO35_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18215;old_locus_tag=CCO35_18205 NZ_NPME01000005.1 Protein Homology CDS 231737 232972 . - 0 ID=cds-WP_031569377.1;Parent=gene-CCO35_RS18215;Dbxref=GenBank:WP_031569377.1;Name=WP_031569377.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=CCO35_RS18215;product=ion channel protein;protein_id=WP_031569377.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 233177 234142 . + . ID=gene-CCO35_RS18220;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=CCO35_RS18220;old_locus_tag=CCO35_18210 NZ_NPME01000005.1 Protein Homology CDS 233177 234142 . + 0 ID=cds-WP_000170380.1;Parent=gene-CCO35_RS18220;Dbxref=GenBank:WP_000170380.1;Name=WP_000170380.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=CCO35_RS18220;product=glucokinase;protein_id=WP_000170380.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 234865 236103 . + . ID=gene-CCO35_RS18230;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=CCO35_RS18230;old_locus_tag=CCO35_18220 NZ_NPME01000005.1 Protein Homology CDS 234865 236103 . + 0 ID=cds-WP_000763118.1;Parent=gene-CCO35_RS18230;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=CCO35_RS18230;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 236153 236224 . - . ID=gene-CCO35_RS18235;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=CCO35_RS18235;old_locus_tag=CCO35_18225 NZ_NPME01000005.1 Protein Homology CDS 236153 236224 . - 0 ID=cds-WP_010723117.1;Parent=gene-CCO35_RS18235;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=CCO35_RS18235;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 236627 237547 . - . ID=gene-CCO35_RS18240;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=CCO35_RS18240;old_locus_tag=CCO35_18230 NZ_NPME01000005.1 Protein Homology CDS 236627 237547 . - 0 ID=cds-WP_000484431.1;Parent=gene-CCO35_RS18240;Dbxref=GenBank:WP_000484431.1;Name=WP_000484431.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=CCO35_RS18240;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484431.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 238069 238311 . + . ID=gene-CCO35_RS18245;Name=CCO35_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18245;old_locus_tag=CCO35_18235 NZ_NPME01000005.1 Protein Homology CDS 238069 238311 . + 0 ID=cds-WP_000639886.1;Parent=gene-CCO35_RS18245;Dbxref=GenBank:WP_000639886.1;Name=WP_000639886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=CCO35_RS18245;product=YfdY family protein;protein_id=WP_000639886.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 238587 239978 . - . ID=gene-CCO35_RS18255;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=CCO35_RS18255;old_locus_tag=CCO35_18245 NZ_NPME01000005.1 Protein Homology CDS 238587 239978 . - 0 ID=cds-WP_000955752.1;Parent=gene-CCO35_RS18255;Dbxref=GenBank:WP_000955752.1;Name=WP_000955752.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=CCO35_RS18255;product=phosphoglycerate transporter PgtP;protein_id=WP_000955752.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 240414 241607 . + . ID=gene-CCO35_RS18265;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=CCO35_RS18265;old_locus_tag=CCO35_18255 NZ_NPME01000005.1 Protein Homology CDS 240414 241607 . + 0 ID=cds-WP_000467985.1;Parent=gene-CCO35_RS18265;Dbxref=GenBank:WP_000467985.1;Name=WP_000467985.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=CCO35_RS18265;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467985.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 241604 243610 . + . ID=gene-CCO35_RS18270;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=CCO35_RS18270;old_locus_tag=CCO35_18260 NZ_NPME01000005.1 Protein Homology CDS 241604 243610 . + 0 ID=cds-WP_094965370.1;Parent=gene-CCO35_RS18270;Dbxref=GenBank:WP_094965370.1;Name=WP_094965370.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=CCO35_RS18270;product=two-component system sensor histidine kinase PgtB;protein_id=WP_094965370.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 243600 244847 . + . ID=gene-CCO35_RS18275;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=CCO35_RS18275;old_locus_tag=CCO35_18265 NZ_NPME01000005.1 Protein Homology CDS 243600 244847 . + 0 ID=cds-WP_000930843.1;Parent=gene-CCO35_RS18275;Dbxref=GenBank:WP_000930843.1;Name=WP_000930843.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=CCO35_RS18275;product=two-component system response regulator PgtA;protein_id=WP_000930843.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 245115 246053 . + . ID=gene-CCO35_RS18280;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=CCO35_RS18280;old_locus_tag=CCO35_18270 NZ_NPME01000005.1 Protein Homology CDS 245115 246053 . + 0 ID=cds-WP_000716005.1;Parent=gene-CCO35_RS18280;Dbxref=GenBank:WP_000716005.1;Name=WP_000716005.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=CCO35_RS18280;product=omptin family outer membrane protease PgtE;protein_id=WP_000716005.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 246210 246284 . - . ID=gene-CCO35_RS18285;Name=CCO35_RS18285;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS18285;old_locus_tag=CCO35_18275 NZ_NPME01000005.1 tRNAscan-SE tRNA 246210 246284 . - . ID=rna-CCO35_RS18285;Parent=gene-CCO35_RS18285;anticodon=(pos:complement(246249..246251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18285;product=tRNA-Arg NZ_NPME01000005.1 tRNAscan-SE exon 246210 246284 . - . ID=exon-CCO35_RS18285-1;Parent=rna-CCO35_RS18285;anticodon=(pos:complement(246249..246251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS18285;product=tRNA-Arg NZ_NPME01000005.1 RefSeq gene 246360 247301 . - . ID=gene-CCO35_RS18290;Name=CCO35_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18290;old_locus_tag=CCO35_18280 NZ_NPME01000005.1 Protein Homology CDS 246360 247301 . - 0 ID=cds-WP_000377772.1;Parent=gene-CCO35_RS18290;Dbxref=GenBank:WP_000377772.1;Name=WP_000377772.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=CCO35_RS18290;product=formate/nitrite transporter family protein;protein_id=WP_000377772.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 247590 248345 . + . ID=gene-CCO35_RS18295;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=CCO35_RS18295;old_locus_tag=CCO35_18285 NZ_NPME01000005.1 Protein Homology CDS 247590 248345 . + 0 ID=cds-WP_000776787.1;Parent=gene-CCO35_RS18295;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=CCO35_RS18295;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 248406 249713 . - . ID=gene-CCO35_RS18300;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=CCO35_RS18300;old_locus_tag=CCO35_18290 NZ_NPME01000005.1 Protein Homology CDS 248406 249713 . - 0 ID=cds-WP_001518618.1;Parent=gene-CCO35_RS18300;Dbxref=GenBank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=CCO35_RS18300;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 250084 250368 . + . ID=gene-CCO35_RS18305;Name=CCO35_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18305;old_locus_tag=CCO35_18295 NZ_NPME01000005.1 Protein Homology CDS 250084 250368 . + 0 ID=cds-WP_000030902.1;Parent=gene-CCO35_RS18305;Dbxref=GenBank:WP_000030902.1;Name=WP_000030902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=CCO35_RS18305;product=YfcZ/YiiS family protein;protein_id=WP_000030902.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 250546 251856 . + . ID=gene-CCO35_RS18310;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=CCO35_RS18310;old_locus_tag=CCO35_18300 NZ_NPME01000005.1 Protein Homology CDS 250546 251856 . + 0 ID=cds-WP_094965371.1;Parent=gene-CCO35_RS18310;Dbxref=GenBank:WP_094965371.1;Name=WP_094965371.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=CCO35_RS18310;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_094965371.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 251856 254003 . + . ID=gene-CCO35_RS18315;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=CCO35_RS18315;old_locus_tag=CCO35_18305 NZ_NPME01000005.1 Protein Homology CDS 251856 254003 . + 0 ID=cds-WP_023214275.1;Parent=gene-CCO35_RS18315;Dbxref=GenBank:WP_023214275.1;Name=WP_023214275.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=CCO35_RS18315;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_023214275.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 254212 254697 . + . ID=gene-CCO35_RS18320;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=CCO35_RS18320;old_locus_tag=CCO35_18310 NZ_NPME01000005.1 Protein Homology CDS 254212 254697 . + 0 ID=cds-WP_001195801.1;Parent=gene-CCO35_RS18320;Dbxref=GenBank:WP_001195801.1;Name=WP_001195801.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=CCO35_RS18320;product=phosphohistidine phosphatase SixA;protein_id=WP_001195801.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 254797 255348 . - . ID=gene-CCO35_RS18325;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=CCO35_RS18325;old_locus_tag=CCO35_18315 NZ_NPME01000005.1 Protein Homology CDS 254797 255348 . - 0 ID=cds-WP_000730794.1;Parent=gene-CCO35_RS18325;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=CCO35_RS18325;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 255514 256446 . + . ID=gene-CCO35_RS18330;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=CCO35_RS18330;old_locus_tag=CCO35_18320 NZ_NPME01000005.1 Protein Homology CDS 255514 256446 . + 0 ID=cds-WP_001542329.1;Parent=gene-CCO35_RS18330;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=CCO35_RS18330;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 256482 257567 . + . ID=gene-CCO35_RS18335;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CCO35_RS18335;old_locus_tag=CCO35_18325 NZ_NPME01000005.1 Protein Homology CDS 256482 257567 . + 0 ID=cds-WP_000918457.1;Parent=gene-CCO35_RS18335;Dbxref=GenBank:WP_000918457.1;Name=WP_000918457.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=CCO35_RS18335;product=chorismate synthase;protein_id=WP_000918457.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 257571 258395 . + . ID=gene-CCO35_RS18340;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=CCO35_RS18340;old_locus_tag=CCO35_18330 NZ_NPME01000005.1 Protein Homology CDS 257571 258395 . + 0 ID=cds-WP_000750428.1;Parent=gene-CCO35_RS18340;Dbxref=GenBank:WP_000750428.1;Name=WP_000750428.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=CCO35_RS18340;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750428.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 258395 259204 . + . ID=gene-CCO35_RS18345;Name=CCO35_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18345;old_locus_tag=CCO35_18335 NZ_NPME01000005.1 Protein Homology CDS 258395 259204 . + 0 ID=cds-WP_000368600.1;Parent=gene-CCO35_RS18345;Dbxref=GenBank:WP_000368600.1;Name=WP_000368600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=CCO35_RS18345;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368600.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 259204 259752 . + . ID=gene-CCO35_RS18350;Name=CCO35_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18350;old_locus_tag=CCO35_18340 NZ_NPME01000005.1 Protein Homology CDS 259204 259752 . + 0 ID=cds-WP_001089211.1;Parent=gene-CCO35_RS18350;Dbxref=GenBank:WP_001089211.1;Name=WP_001089211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=CCO35_RS18350;product=elongation factor P hydroxylase;protein_id=WP_001089211.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 259785 260060 . + . ID=gene-CCO35_RS18355;Name=CCO35_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18355;old_locus_tag=CCO35_18345 NZ_NPME01000005.1 Protein Homology CDS 259785 260060 . + 0 ID=cds-WP_000559749.1;Parent=gene-CCO35_RS18355;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=CCO35_RS18355;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 260112 262112 . - . ID=gene-CCO35_RS18360;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=CCO35_RS18360;old_locus_tag=CCO35_18350 NZ_NPME01000005.1 Protein Homology CDS 260112 262112 . - 0 ID=cds-WP_000816077.1;Parent=gene-CCO35_RS18360;Dbxref=GenBank:WP_000816077.1;Name=WP_000816077.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=CCO35_RS18360;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_000816077.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 262272 263486 . + . ID=gene-CCO35_RS18365;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=CCO35_RS18365;old_locus_tag=CCO35_18355 NZ_NPME01000005.1 Protein Homology CDS 262272 263486 . + 0 ID=cds-WP_000817159.1;Parent=gene-CCO35_RS18365;Dbxref=GenBank:WP_000817159.1;Name=WP_000817159.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=CCO35_RS18365;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817159.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 263584 264240 . + . ID=gene-CCO35_RS18370;Name=CCO35_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18370;old_locus_tag=CCO35_18360 NZ_NPME01000005.1 Protein Homology CDS 263584 264240 . + 0 ID=cds-WP_001142909.1;Parent=gene-CCO35_RS18370;Dbxref=GenBank:WP_001142909.1;Name=WP_001142909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=CCO35_RS18370;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142909.1;transl_table=11 NZ_NPME01000005.1 RefSeq pseudogene 264307 264564 . - . ID=gene-CCO35_RS18375;Name=CCO35_RS18375;end_range=264564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS18375;old_locus_tag=CCO35_18365;partial=true;pseudo=true NZ_NPME01000005.1 Protein Homology CDS 264307 264564 . - 0 ID=cds-CCO35_RS18375;Parent=gene-CCO35_RS18375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=264564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=CCO35_RS18375;partial=true;product=DUF3828 domain-containing protein;pseudo=true;transl_table=11 NZ_NPME01000005.1 RefSeq gene 264544 264861 . + . ID=gene-CCO35_RS18380;Name=CCO35_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18380;old_locus_tag=CCO35_18370 NZ_NPME01000005.1 Protein Homology CDS 264544 264861 . + 0 ID=cds-WP_043942888.1;Parent=gene-CCO35_RS18380;Dbxref=GenBank:WP_043942888.1;Name=WP_043942888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001671978.1;locus_tag=CCO35_RS18380;product=hypothetical protein;protein_id=WP_043942888.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 265041 266219 . + . ID=gene-CCO35_RS18385;Name=CCO35_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18385;old_locus_tag=CCO35_18375 NZ_NPME01000005.1 Protein Homology CDS 265041 266219 . + 0 ID=cds-WP_000127728.1;Parent=gene-CCO35_RS18385;Dbxref=GenBank:WP_000127728.1;Name=WP_000127728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=CCO35_RS18385;product=MFS transporter;protein_id=WP_000127728.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 266216 267217 . - . ID=gene-CCO35_RS18390;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=CCO35_RS18390;old_locus_tag=CCO35_18380 NZ_NPME01000005.1 Protein Homology CDS 266216 267217 . - 0 ID=cds-WP_000553396.1;Parent=gene-CCO35_RS18390;Dbxref=GenBank:WP_000553396.1;Name=WP_000553396.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=CCO35_RS18390;product=flagella biosynthesis regulator Flk;protein_id=WP_000553396.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 267321 268457 . + . ID=gene-CCO35_RS18395;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=CCO35_RS18395;old_locus_tag=CCO35_18385 NZ_NPME01000005.1 Protein Homology CDS 267321 268457 . + 0 ID=cds-WP_000699179.1;Parent=gene-CCO35_RS18395;Dbxref=GenBank:WP_000699179.1;Name=WP_000699179.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=CCO35_RS18395;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699179.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 268525 269538 . + . ID=gene-CCO35_RS18400;Name=CCO35_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18400;old_locus_tag=CCO35_18390 NZ_NPME01000005.1 Protein Homology CDS 268525 269538 . + 0 ID=cds-WP_001289141.1;Parent=gene-CCO35_RS18400;Dbxref=GenBank:WP_001289141.1;Name=WP_001289141.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=CCO35_RS18400;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289141.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 269538 270350 . + . ID=gene-CCO35_RS18405;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CCO35_RS18405;old_locus_tag=CCO35_18395 NZ_NPME01000005.1 Protein Homology CDS 269538 270350 . + 0 ID=cds-WP_000016628.1;Parent=gene-CCO35_RS18405;Dbxref=GenBank:WP_000016628.1;Name=WP_000016628.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=CCO35_RS18405;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016628.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 270399 271058 . + . ID=gene-CCO35_RS18410;Name=CCO35_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18410;old_locus_tag=CCO35_18400 NZ_NPME01000005.1 Protein Homology CDS 270399 271058 . + 0 ID=cds-WP_000364318.1;Parent=gene-CCO35_RS18410;Dbxref=GenBank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=CCO35_RS18410;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 271208 272122 . + . ID=gene-CCO35_RS18415;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CCO35_RS18415;old_locus_tag=CCO35_18405 NZ_NPME01000005.1 Protein Homology CDS 271208 272122 . + 0 ID=cds-WP_000118383.1;Parent=gene-CCO35_RS18415;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=CCO35_RS18415;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 272190 273458 . + . ID=gene-CCO35_RS18420;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=CCO35_RS18420;old_locus_tag=CCO35_18410 NZ_NPME01000005.1 Protein Homology CDS 272190 273458 . + 0 ID=cds-WP_000792275.1;Parent=gene-CCO35_RS18420;Dbxref=GenBank:WP_000792275.1;Name=WP_000792275.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=CCO35_RS18420;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000792275.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 273448 274122 . + . ID=gene-CCO35_RS18425;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=CCO35_RS18425;old_locus_tag=CCO35_18415 NZ_NPME01000005.1 Protein Homology CDS 273448 274122 . + 0 ID=cds-WP_000157030.1;Parent=gene-CCO35_RS18425;Dbxref=GenBank:WP_000157030.1;Name=WP_000157030.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=CCO35_RS18425;product=cell division protein DedD;protein_id=WP_000157030.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 274433 274921 . + . ID=gene-CCO35_RS18430;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=CCO35_RS18430;old_locus_tag=CCO35_18420 NZ_NPME01000005.1 Protein Homology CDS 274433 274921 . + 0 ID=cds-WP_000262102.1;Parent=gene-CCO35_RS18430;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=CCO35_RS18430;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 274959 276476 . + . ID=gene-CCO35_RS18435;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CCO35_RS18435;old_locus_tag=CCO35_18425 NZ_NPME01000005.1 Protein Homology CDS 274959 276476 . + 0 ID=cds-WP_000334205.1;Parent=gene-CCO35_RS18435;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=CCO35_RS18435;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 276512 277939 . - . ID=gene-CCO35_RS18440;Name=CCO35_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18440;old_locus_tag=CCO35_18430 NZ_NPME01000005.1 Protein Homology CDS 276512 277939 . - 0 ID=cds-WP_094965372.1;Parent=gene-CCO35_RS18440;Dbxref=GenBank:WP_094965372.1;Name=WP_094965372.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=CCO35_RS18440;product=sigma-54 interaction domain-containing protein;protein_id=WP_094965372.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 278150 279547 . + . ID=gene-CCO35_RS18445;Name=CCO35_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18445;old_locus_tag=CCO35_18435 NZ_NPME01000005.1 Protein Homology CDS 278150 279547 . + 0 ID=cds-WP_000132314.1;Parent=gene-CCO35_RS18445;Dbxref=GenBank:WP_000132314.1;Name=WP_000132314.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=CCO35_RS18445;product=diaminopimelate decarboxylase family protein;protein_id=WP_000132314.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 279638 281059 . + . ID=gene-CCO35_RS18450;Name=CCO35_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18450;old_locus_tag=CCO35_18440 NZ_NPME01000005.1 Protein Homology CDS 279638 281059 . + 0 ID=cds-WP_000072512.1;Parent=gene-CCO35_RS18450;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=CCO35_RS18450;product=APC family permease;protein_id=WP_000072512.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 281061 282164 . + . ID=gene-CCO35_RS18455;Name=CCO35_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18455;old_locus_tag=CCO35_18445 NZ_NPME01000005.1 Protein Homology CDS 281061 282164 . + 0 ID=cds-WP_000281907.1;Parent=gene-CCO35_RS18455;Dbxref=GenBank:WP_000281907.1;Name=WP_000281907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=CCO35_RS18455;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281907.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 282228 283634 . + . ID=gene-CCO35_RS18460;Name=CCO35_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18460;old_locus_tag=CCO35_18450 NZ_NPME01000005.1 Protein Homology CDS 282228 283634 . + 0 ID=cds-WP_000380360.1;Parent=gene-CCO35_RS18460;Dbxref=GenBank:WP_000380360.1;Name=WP_000380360.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=CCO35_RS18460;product=amino acid permease;protein_id=WP_000380360.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 283661 284230 . + . ID=gene-CCO35_RS18465;Name=CCO35_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18465;old_locus_tag=CCO35_18455 NZ_NPME01000005.1 Protein Homology CDS 283661 284230 . + 0 ID=cds-WP_000825682.1;Parent=gene-CCO35_RS18465;Dbxref=GenBank:WP_000825682.1;Name=WP_000825682.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=CCO35_RS18465;product=UbiX family flavin prenyltransferase;protein_id=WP_000825682.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 284519 285301 . + . ID=gene-CCO35_RS18475;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=CCO35_RS18475;old_locus_tag=CCO35_18465 NZ_NPME01000005.1 Protein Homology CDS 284519 285301 . + 0 ID=cds-WP_000754418.1;Parent=gene-CCO35_RS18475;Dbxref=GenBank:WP_000754418.1;Name=WP_000754418.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=CCO35_RS18475;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754418.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 285539 286321 . + . ID=gene-CCO35_RS18480;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=CCO35_RS18480;old_locus_tag=CCO35_18470 NZ_NPME01000005.1 Protein Homology CDS 285539 286321 . + 0 ID=cds-WP_000731868.1;Parent=gene-CCO35_RS18480;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=CCO35_RS18480;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 286504 287190 . + . ID=gene-CCO35_RS18485;Name=CCO35_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18485;old_locus_tag=CCO35_18475 NZ_NPME01000005.1 Protein Homology CDS 286504 287190 . + 0 ID=cds-WP_000965498.1;Parent=gene-CCO35_RS18485;Dbxref=GenBank:WP_000965498.1;Name=WP_000965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=CCO35_RS18485;product=histidine ABC transporter permease HisQ;protein_id=WP_000965498.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 287187 287894 . + . ID=gene-CCO35_RS18490;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=CCO35_RS18490;old_locus_tag=CCO35_18480 NZ_NPME01000005.1 Protein Homology CDS 287187 287894 . + 0 ID=cds-WP_000569771.1;Parent=gene-CCO35_RS18490;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=CCO35_RS18490;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 287908 288681 . + . ID=gene-CCO35_RS18495;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=CCO35_RS18495;old_locus_tag=CCO35_18485 NZ_NPME01000005.1 Protein Homology CDS 287908 288681 . + 0 ID=cds-WP_001293591.1;Parent=gene-CCO35_RS18495;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=CCO35_RS18495;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 288733 289626 . - . ID=gene-CCO35_RS18500;Name=CCO35_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18500;old_locus_tag=CCO35_18490 NZ_NPME01000005.1 Protein Homology CDS 288733 289626 . - 0 ID=cds-WP_001166274.1;Parent=gene-CCO35_RS18500;Dbxref=GenBank:WP_001166274.1;Name=WP_001166274.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=CCO35_RS18500;product=TIGR01777 family oxidoreductase;protein_id=WP_001166274.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 289752 290399 . - . ID=gene-CCO35_RS18505;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=CCO35_RS18505;old_locus_tag=CCO35_18495 NZ_NPME01000005.1 Protein Homology CDS 289752 290399 . - 0 ID=cds-WP_000566563.1;Parent=gene-CCO35_RS18505;Dbxref=GenBank:WP_000566563.1;Name=WP_000566563.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=CCO35_RS18505;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566563.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 290542 291186 . + . ID=gene-CCO35_RS18510;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=CCO35_RS18510;old_locus_tag=CCO35_18500 NZ_NPME01000005.1 Protein Homology CDS 290542 291186 . + 0 ID=cds-WP_000043010.1;Parent=gene-CCO35_RS18510;Dbxref=GenBank:WP_000043010.1;Name=WP_000043010.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=CCO35_RS18510;product=glutathione transferase;protein_id=WP_000043010.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 291242 291793 . + . ID=gene-CCO35_RS18515;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=CCO35_RS18515;old_locus_tag=CCO35_18505 NZ_NPME01000005.1 Protein Homology CDS 291242 291793 . + 0 ID=cds-WP_000772458.1;Parent=gene-CCO35_RS18515;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=CCO35_RS18515;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 291850 292404 . + . ID=gene-CCO35_RS18520;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=CCO35_RS18520;old_locus_tag=CCO35_18510 NZ_NPME01000005.1 Protein Homology CDS 291850 292404 . + 0 ID=cds-WP_000230216.1;Parent=gene-CCO35_RS18520;Dbxref=GenBank:WP_000230216.1;Name=WP_000230216.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=CCO35_RS18520;product=NUDIX hydrolase YfcD;protein_id=WP_000230216.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 292410 293429 . - . ID=gene-CCO35_RS18525;Name=CCO35_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18525;old_locus_tag=CCO35_18515 NZ_NPME01000005.1 Protein Homology CDS 292410 293429 . - 0 ID=cds-WP_000026949.1;Parent=gene-CCO35_RS18525;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=CCO35_RS18525;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 293682 294125 . + . ID=gene-CCO35_RS18535;Name=CCO35_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18535;old_locus_tag=CCO35_18525 NZ_NPME01000005.1 Protein Homology CDS 293682 294125 . + 0 ID=cds-WP_000901810.1;Parent=gene-CCO35_RS18535;Dbxref=GenBank:WP_000901810.1;Name=WP_000901810.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=CCO35_RS18535;product=PTS sugar transporter subunit IIA;protein_id=WP_000901810.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 294206 294478 . + . ID=gene-CCO35_RS18540;Name=CCO35_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18540;old_locus_tag=CCO35_18530 NZ_NPME01000005.1 Protein Homology CDS 294206 294478 . + 0 ID=cds-WP_000699818.1;Parent=gene-CCO35_RS18540;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=CCO35_RS18540;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 294499 295890 . + . ID=gene-CCO35_RS18545;Name=CCO35_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18545;old_locus_tag=CCO35_18535 NZ_NPME01000005.1 Protein Homology CDS 294499 295890 . + 0 ID=cds-WP_001522266.1;Parent=gene-CCO35_RS18545;Dbxref=GenBank:WP_001522266.1;Name=WP_001522266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=CCO35_RS18545;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001522266.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 295887 296717 . + . ID=gene-CCO35_RS18550;Name=CCO35_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18550;old_locus_tag=CCO35_18540 NZ_NPME01000005.1 Protein Homology CDS 295887 296717 . + 0 ID=cds-WP_001103272.1;Parent=gene-CCO35_RS18550;Dbxref=GenBank:WP_001103272.1;Name=WP_001103272.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=CCO35_RS18550;product=transketolase;protein_id=WP_001103272.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 296710 297663 . + . ID=gene-CCO35_RS18555;Name=CCO35_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18555;old_locus_tag=CCO35_18545 NZ_NPME01000005.1 Protein Homology CDS 296710 297663 . + 0 ID=cds-WP_000593025.1;Parent=gene-CCO35_RS18555;Dbxref=GenBank:WP_000593025.1;Name=WP_000593025.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=CCO35_RS18555;product=transketolase family protein;protein_id=WP_000593025.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 297712 299232 . - . ID=gene-CCO35_RS18560;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=CCO35_RS18560;old_locus_tag=CCO35_18550 NZ_NPME01000005.1 Protein Homology CDS 297712 299232 . - 0 ID=cds-WP_000117932.1;Parent=gene-CCO35_RS18560;Dbxref=GenBank:WP_000117932.1;Name=WP_000117932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=CCO35_RS18560;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117932.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 299450 301594 . - . ID=gene-CCO35_RS18565;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO35_RS18565;old_locus_tag=CCO35_18555 NZ_NPME01000005.1 Protein Homology CDS 299450 301594 . - 0 ID=cds-WP_000086690.1;Parent=gene-CCO35_RS18565;Dbxref=GenBank:WP_000086690.1;Name=WP_000086690.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=CCO35_RS18565;product=phosphate acetyltransferase;protein_id=WP_000086690.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 301671 302873 . - . ID=gene-CCO35_RS18570;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=CCO35_RS18570;old_locus_tag=CCO35_18560 NZ_NPME01000005.1 Protein Homology CDS 301671 302873 . - 0 ID=cds-WP_000095689.1;Parent=gene-CCO35_RS18570;Dbxref=GenBank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=CCO35_RS18570;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 303213 303668 . + . ID=gene-CCO35_RS18575;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=CCO35_RS18575;old_locus_tag=CCO35_18565 NZ_NPME01000005.1 Protein Homology CDS 303213 303668 . + 0 ID=cds-WP_000106617.1;Parent=gene-CCO35_RS18575;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=CCO35_RS18575;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 303751 304245 . + . ID=gene-CCO35_RS18580;Name=CCO35_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18580;old_locus_tag=CCO35_18570 NZ_NPME01000005.1 Protein Homology CDS 303751 304245 . + 0 ID=cds-WP_000426133.1;Parent=gene-CCO35_RS18580;Dbxref=GenBank:WP_000426133.1;Name=WP_000426133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=CCO35_RS18580;product=YfbU family protein;protein_id=WP_000426133.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 304238 304915 . + . ID=gene-CCO35_RS18585;Name=CCO35_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18585;old_locus_tag=CCO35_18575 NZ_NPME01000005.1 Protein Homology CDS 304238 304915 . + 0 ID=cds-WP_001555201.1;Parent=gene-CCO35_RS18585;Dbxref=GenBank:WP_001555201.1;Name=WP_001555201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=CCO35_RS18585;product=sugar phosphatase;protein_id=WP_001555201.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 304992 306818 . + . ID=gene-CCO35_RS18590;Name=CCO35_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18590;old_locus_tag=CCO35_18580 NZ_NPME01000005.1 Protein Homology CDS 304992 306818 . + 0 ID=cds-WP_001012861.1;Parent=gene-CCO35_RS18590;Dbxref=GenBank:WP_001012861.1;Name=WP_001012861.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=CCO35_RS18590;product=SLC13 family permease;protein_id=WP_001012861.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 306910 307509 . - . ID=gene-CCO35_RS18595;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=CCO35_RS18595;old_locus_tag=CCO35_18585 NZ_NPME01000005.1 Protein Homology CDS 306910 307509 . - 0 ID=cds-WP_000813882.1;Parent=gene-CCO35_RS18595;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=CCO35_RS18595;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 307603 308817 . - . ID=gene-CCO35_RS18600;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=CCO35_RS18600;old_locus_tag=CCO35_18590 NZ_NPME01000005.1 Protein Homology CDS 307603 308817 . - 0 ID=cds-WP_000074541.1;Parent=gene-CCO35_RS18600;Dbxref=GenBank:WP_000074541.1;Name=WP_000074541.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=CCO35_RS18600;product=alanine transaminase AlaA;protein_id=WP_000074541.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 309749 310687 . + . ID=gene-CCO35_RS18610;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=CCO35_RS18610;old_locus_tag=CCO35_18600 NZ_NPME01000005.1 Protein Homology CDS 309749 310687 . + 0 ID=cds-WP_000606288.1;Parent=gene-CCO35_RS18610;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=CCO35_RS18610;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 310767 310919 . + . ID=gene-CCO35_RS18615;Name=CCO35_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18615;old_locus_tag=CCO35_18605 NZ_NPME01000005.1 Protein Homology CDS 310767 310919 . + 0 ID=cds-WP_001612485.1;Parent=gene-CCO35_RS18615;Dbxref=GenBank:WP_001612485.1;Name=WP_001612485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=CCO35_RS18615;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001612485.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 311314 311757 . + . ID=gene-CCO35_RS18620;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=CCO35_RS18620;old_locus_tag=CCO35_18610 NZ_NPME01000005.1 Protein Homology CDS 311314 311757 . + 0 ID=cds-WP_000062993.1;Parent=gene-CCO35_RS18620;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=CCO35_RS18620;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 311773 312435 . + . ID=gene-CCO35_RS18625;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=CCO35_RS18625;old_locus_tag=CCO35_18615 NZ_NPME01000005.1 Protein Homology CDS 311773 312435 . + 0 ID=cds-WP_000386728.1;Parent=gene-CCO35_RS18625;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=CCO35_RS18625;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 312522 314324 . + . ID=gene-CCO35_RS18630;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=CCO35_RS18630;old_locus_tag=CCO35_18620 NZ_NPME01000005.1 Protein Homology CDS 312522 314324 . + 0 ID=cds-WP_080097056.1;Parent=gene-CCO35_RS18630;Dbxref=GenBank:WP_080097056.1;Name=WP_080097056.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=CCO35_RS18630;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_080097056.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 314327 314827 . + . ID=gene-CCO35_RS18635;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=CCO35_RS18635;old_locus_tag=CCO35_18625 NZ_NPME01000005.1 Protein Homology CDS 314327 314827 . + 0 ID=cds-WP_000545038.1;Parent=gene-CCO35_RS18635;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=CCO35_RS18635;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 314824 316161 . + . ID=gene-CCO35_RS18640;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=CCO35_RS18640;old_locus_tag=CCO35_18630 NZ_NPME01000005.1 Protein Homology CDS 314824 316161 . + 0 ID=cds-WP_000800048.1;Parent=gene-CCO35_RS18640;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=CCO35_RS18640;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 316192 318918 . + . ID=gene-CCO35_RS18645;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=CCO35_RS18645;old_locus_tag=CCO35_18635 NZ_NPME01000005.1 Protein Homology CDS 316192 318918 . + 0 ID=cds-WP_001528469.1;Parent=gene-CCO35_RS18645;Dbxref=GenBank:WP_001528469.1;Name=WP_001528469.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=CCO35_RS18645;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001528469.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 318915 319892 . + . ID=gene-CCO35_RS18650;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=CCO35_RS18650;old_locus_tag=CCO35_18640 NZ_NPME01000005.1 Protein Homology CDS 318915 319892 . + 0 ID=cds-WP_000118515.1;Parent=gene-CCO35_RS18650;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=CCO35_RS18650;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 319907 320449 . + . ID=gene-CCO35_RS18655;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=CCO35_RS18655;old_locus_tag=CCO35_18645 NZ_NPME01000005.1 Protein Homology CDS 319907 320449 . + 0 ID=cds-WP_000172747.1;Parent=gene-CCO35_RS18655;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=CCO35_RS18655;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 320460 321014 . + . ID=gene-CCO35_RS18660;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=CCO35_RS18660;old_locus_tag=CCO35_18650 NZ_NPME01000005.1 Protein Homology CDS 320460 321014 . + 0 ID=cds-WP_000393522.1;Parent=gene-CCO35_RS18660;Dbxref=GenBank:WP_000393522.1;Name=WP_000393522.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=CCO35_RS18660;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 321011 321313 . + . ID=gene-CCO35_RS18665;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=CCO35_RS18665;old_locus_tag=CCO35_18655 NZ_NPME01000005.1 Protein Homology CDS 321011 321313 . + 0 ID=cds-WP_000612687.1;Parent=gene-CCO35_RS18665;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=CCO35_RS18665;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 321310 323151 . + . ID=gene-CCO35_RS18670;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=CCO35_RS18670;old_locus_tag=CCO35_18660 NZ_NPME01000005.1 Protein Homology CDS 321310 323151 . + 0 ID=cds-WP_001056581.1;Parent=gene-CCO35_RS18670;Dbxref=GenBank:WP_001056581.1;Name=WP_001056581.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=CCO35_RS18670;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056581.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 323228 324757 . + . ID=gene-CCO35_RS18675;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=CCO35_RS18675;old_locus_tag=CCO35_18665 NZ_NPME01000005.1 Protein Homology CDS 323228 324757 . + 0 ID=cds-WP_000926430.1;Parent=gene-CCO35_RS18675;Dbxref=GenBank:WP_000926430.1;Name=WP_000926430.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=CCO35_RS18675;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926430.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 324764 326221 . + . ID=gene-CCO35_RS18680;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=CCO35_RS18680;old_locus_tag=CCO35_18670 NZ_NPME01000005.1 Protein Homology CDS 324764 326221 . + 0 ID=cds-WP_000156669.1;Parent=gene-CCO35_RS18680;Dbxref=GenBank:WP_000156669.1;Name=WP_000156669.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=CCO35_RS18680;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156669.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 326362 327366 . - . ID=gene-CCO35_RS18685;Name=CCO35_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18685;old_locus_tag=CCO35_18675 NZ_NPME01000005.1 Protein Homology CDS 326362 327366 . - 0 ID=cds-WP_000368564.1;Parent=gene-CCO35_RS18685;Dbxref=GenBank:WP_000368564.1;Name=WP_000368564.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131502.1;locus_tag=CCO35_RS18685;product=chemotaxis protein;protein_id=WP_000368564.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 327432 328349 . - . ID=gene-CCO35_RS18690;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=CCO35_RS18690;old_locus_tag=CCO35_18680 NZ_NPME01000005.1 Protein Homology CDS 327432 328349 . - 0 ID=cds-WP_000419094.1;Parent=gene-CCO35_RS18690;Dbxref=GenBank:WP_000419094.1;Name=WP_000419094.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=CCO35_RS18690;product=ribonuclease BN;protein_id=WP_000419094.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 328410 328871 . + . ID=gene-CCO35_RS18695;Name=CCO35_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18695;old_locus_tag=CCO35_18685 NZ_NPME01000005.1 Protein Homology CDS 328410 328871 . + 0 ID=cds-WP_000568155.1;Parent=gene-CCO35_RS18695;Dbxref=GenBank:WP_000568155.1;Name=WP_000568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=CCO35_RS18695;product=GNAT family N-acetyltransferase;protein_id=WP_000568155.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 328926 329231 . + . ID=gene-CCO35_RS18700;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=CCO35_RS18700;old_locus_tag=CCO35_18690 NZ_NPME01000005.1 Protein Homology CDS 328926 329231 . + 0 ID=cds-WP_001612439.1;Parent=gene-CCO35_RS18700;Dbxref=GenBank:WP_001612439.1;Name=WP_001612439.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=CCO35_RS18700;product=stress response protein ElaB;protein_id=WP_001612439.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 329332 330627 . + . ID=gene-CCO35_RS18705;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=CCO35_RS18705;old_locus_tag=CCO35_18695 NZ_NPME01000005.1 Protein Homology CDS 329332 330627 . + 0 ID=cds-WP_000555675.1;Parent=gene-CCO35_RS18705;Dbxref=GenBank:WP_000555675.1;Name=WP_000555675.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406427.1;locus_tag=CCO35_RS18705;product=isochorismate synthase MenF;protein_id=WP_000555675.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 330713 332383 . + . ID=gene-CCO35_RS18710;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CCO35_RS18710;old_locus_tag=CCO35_18700 NZ_NPME01000005.1 Protein Homology CDS 330713 332383 . + 0 ID=cds-WP_000116384.1;Parent=gene-CCO35_RS18710;Dbxref=GenBank:WP_000116384.1;Name=WP_000116384.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=CCO35_RS18710;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116384.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 332380 333138 . + . ID=gene-CCO35_RS18715;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CCO35_RS18715;old_locus_tag=CCO35_18705 NZ_NPME01000005.1 Protein Homology CDS 332380 333138 . + 0 ID=cds-WP_031569266.1;Parent=gene-CCO35_RS18715;Dbxref=GenBank:WP_031569266.1;Name=WP_031569266.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=CCO35_RS18715;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_031569266.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 333153 334010 . + . ID=gene-CCO35_RS18720;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CCO35_RS18720;old_locus_tag=CCO35_18710 NZ_NPME01000005.1 Protein Homology CDS 333153 334010 . + 0 ID=cds-WP_000640013.1;Parent=gene-CCO35_RS18720;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=CCO35_RS18720;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 334010 334972 . + . ID=gene-CCO35_RS18725;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CCO35_RS18725;old_locus_tag=CCO35_18715 NZ_NPME01000005.1 Protein Homology CDS 334010 334972 . + 0 ID=cds-WP_001255563.1;Parent=gene-CCO35_RS18725;Dbxref=GenBank:WP_001255563.1;Name=WP_001255563.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=CCO35_RS18725;product=o-succinylbenzoate synthase;protein_id=WP_001255563.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 334969 336336 . + . ID=gene-CCO35_RS18730;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CCO35_RS18730;old_locus_tag=CCO35_18720 NZ_NPME01000005.1 Protein Homology CDS 334969 336336 . + 0 ID=cds-WP_023214269.1;Parent=gene-CCO35_RS18730;Dbxref=GenBank:WP_023214269.1;Name=WP_023214269.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=CCO35_RS18730;product=o-succinylbenzoate--CoA ligase;protein_id=WP_023214269.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 336434 336691 . + . ID=gene-CCO35_RS18735;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=CCO35_RS18735;old_locus_tag=CCO35_18725 NZ_NPME01000005.1 Protein Homology CDS 336434 336691 . + 0 ID=cds-WP_000455132.1;Parent=gene-CCO35_RS18735;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=CCO35_RS18735;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 336686 337063 . - . ID=gene-CCO35_RS18740;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=CCO35_RS18740;old_locus_tag=CCO35_18730 NZ_NPME01000005.1 Protein Homology CDS 336686 337063 . - 0 ID=cds-WP_000538695.1;Parent=gene-CCO35_RS18740;Dbxref=GenBank:WP_000538695.1;Name=WP_000538695.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=CCO35_RS18740;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538695.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 337063 337398 . - . ID=gene-CCO35_RS18745;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=CCO35_RS18745;old_locus_tag=CCO35_18735 NZ_NPME01000005.1 Protein Homology CDS 337063 337398 . - 0 ID=cds-WP_000580687.1;Parent=gene-CCO35_RS18745;Dbxref=GenBank:WP_000580687.1;Name=WP_000580687.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=CCO35_RS18745;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580687.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 337395 339041 . - . ID=gene-CCO35_RS18750;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=CCO35_RS18750;old_locus_tag=CCO35_18740 NZ_NPME01000005.1 Protein Homology CDS 337395 339041 . - 0 ID=cds-WP_031615743.1;Parent=gene-CCO35_RS18750;Dbxref=GenBank:WP_031615743.1;Name=WP_031615743.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=CCO35_RS18750;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_031615743.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 339038 339937 . - . ID=gene-CCO35_RS18755;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=CCO35_RS18755;old_locus_tag=CCO35_18745 NZ_NPME01000005.1 Protein Homology CDS 339038 339937 . - 0 ID=cds-WP_000169774.1;Parent=gene-CCO35_RS18755;Dbxref=GenBank:WP_000169774.1;Name=WP_000169774.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=CCO35_RS18755;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169774.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 339934 341916 . - . ID=gene-CCO35_RS18760;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=CCO35_RS18760;old_locus_tag=CCO35_18750 NZ_NPME01000005.1 Protein Homology CDS 339934 341916 . - 0 ID=cds-WP_000648762.1;Parent=gene-CCO35_RS18760;Dbxref=GenBank:WP_000648762.1;Name=WP_000648762.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=CCO35_RS18760;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_000648762.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 341913 342896 . - . ID=gene-CCO35_RS18765;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=CCO35_RS18765;old_locus_tag=CCO35_18755 NZ_NPME01000005.1 Protein Homology CDS 341913 342896 . - 0 ID=cds-WP_000458893.1;Parent=gene-CCO35_RS18765;Dbxref=GenBank:WP_000458893.1;Name=WP_000458893.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=CCO35_RS18765;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458893.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 342899 344038 . - . ID=gene-CCO35_RS18770;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=CCO35_RS18770;old_locus_tag=CCO35_18760 NZ_NPME01000005.1 Protein Homology CDS 342899 344038 . - 0 ID=cds-WP_001279303.1;Parent=gene-CCO35_RS18770;Dbxref=GenBank:WP_001279303.1;Name=WP_001279303.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=CCO35_RS18770;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001279303.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 344337 344942 . + . ID=gene-CCO35_RS18775;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=CCO35_RS18775;old_locus_tag=CCO35_18765 NZ_NPME01000005.1 Protein Homology CDS 344337 344942 . + 0 ID=cds-WP_000879260.1;Parent=gene-CCO35_RS18775;Dbxref=GenBank:WP_000879260.1;Name=WP_000879260.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=CCO35_RS18775;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879260.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 344988 345413 . - . ID=gene-CCO35_RS18780;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=CCO35_RS18780;old_locus_tag=CCO35_18770 NZ_NPME01000005.1 Protein Homology CDS 344988 345413 . - 0 ID=cds-WP_001249897.1;Parent=gene-CCO35_RS18780;Dbxref=GenBank:WP_001249897.1;Name=WP_001249897.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=CCO35_RS18780;product=nucleoside triphosphatase NudI;protein_id=WP_001249897.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 345692 346234 . + . ID=gene-CCO35_RS18785;Name=CCO35_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18785;old_locus_tag=CCO35_18775 NZ_NPME01000005.1 Protein Homology CDS 345692 346234 . + 0 ID=cds-WP_001562414.1;Parent=gene-CCO35_RS18785;Dbxref=GenBank:WP_001562414.1;Name=WP_001562414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=CCO35_RS18785;product=YfaZ family outer membrane protein;protein_id=WP_001562414.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 346349 347545 . + . ID=gene-CCO35_RS18790;Name=CCO35_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18790;old_locus_tag=CCO35_18780 NZ_NPME01000005.1 Protein Homology CDS 346349 347545 . + 0 ID=cds-WP_023207568.1;Parent=gene-CCO35_RS18790;Dbxref=GenBank:WP_023207568.1;Name=WP_023207568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=CCO35_RS18790;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_023207568.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 347779 348801 . - . ID=gene-CCO35_RS18795;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=CCO35_RS18795;old_locus_tag=CCO35_18785 NZ_NPME01000005.1 Protein Homology CDS 347779 348801 . - 0 ID=cds-WP_001017717.1;Parent=gene-CCO35_RS18795;Dbxref=GenBank:WP_001017717.1;Name=WP_001017717.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=CCO35_RS18795;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_001017717.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 349227 350417 . - . ID=gene-CCO35_RS18805;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=CCO35_RS18805;old_locus_tag=CCO35_18795 NZ_NPME01000005.1 Protein Homology CDS 349227 350417 . - 0 ID=cds-WP_031569247.1;Parent=gene-CCO35_RS18805;Dbxref=GenBank:WP_031569247.1;Name=WP_031569247.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=CCO35_RS18805;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_031569247.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 350414 351673 . - . ID=gene-CCO35_RS18810;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=CCO35_RS18810;old_locus_tag=CCO35_18800 NZ_NPME01000005.1 Protein Homology CDS 350414 351673 . - 0 ID=cds-WP_000667162.1;Parent=gene-CCO35_RS18810;Dbxref=GenBank:WP_000667162.1;Name=WP_000667162.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=CCO35_RS18810;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667162.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 351663 353291 . - . ID=gene-CCO35_RS18815;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=CCO35_RS18815;old_locus_tag=CCO35_18805 NZ_NPME01000005.1 Protein Homology CDS 351663 353291 . - 0 ID=cds-WP_000857205.1;Parent=gene-CCO35_RS18815;Dbxref=GenBank:WP_000857205.1;Name=WP_000857205.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=CCO35_RS18815;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857205.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 353564 354922 . + . ID=gene-CCO35_RS18820;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CCO35_RS18820;old_locus_tag=CCO35_18810 NZ_NPME01000005.1 Protein Homology CDS 353564 354922 . + 0 ID=cds-WP_000948739.1;Parent=gene-CCO35_RS18820;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=CCO35_RS18820;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 354927 355997 . + . ID=gene-CCO35_RS18825;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=CCO35_RS18825;old_locus_tag=CCO35_18815 NZ_NPME01000005.1 Protein Homology CDS 354927 355997 . + 0 ID=cds-WP_000858943.1;Parent=gene-CCO35_RS18825;Dbxref=GenBank:WP_000858943.1;Name=WP_000858943.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=CCO35_RS18825;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858943.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 356113 356991 . - . ID=gene-CCO35_RS18830;Name=CCO35_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18830;old_locus_tag=CCO35_18820 NZ_NPME01000005.1 Protein Homology CDS 356113 356991 . - 0 ID=cds-WP_000176719.1;Parent=gene-CCO35_RS18830;Dbxref=GenBank:WP_000176719.1;Name=WP_000176719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=CCO35_RS18830;product=LysR family transcriptional regulator;protein_id=WP_000176719.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 357153 358343 . + . ID=gene-CCO35_RS18835;Name=CCO35_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18835;old_locus_tag=CCO35_18825 NZ_NPME01000005.1 Protein Homology CDS 357153 358343 . + 0 ID=cds-WP_000660248.1;Parent=gene-CCO35_RS18835;Dbxref=GenBank:WP_000660248.1;Name=WP_000660248.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=CCO35_RS18835;product=MFS transporter;protein_id=WP_000660248.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 358345 358599 . - . ID=gene-CCO35_RS18840;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=CCO35_RS18840;old_locus_tag=CCO35_18830 NZ_NPME01000005.1 Protein Homology CDS 358345 358599 . - 0 ID=cds-WP_000533921.1;Parent=gene-CCO35_RS18840;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=CCO35_RS18840;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 358599 359729 . - . ID=gene-CCO35_RS18845;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=CCO35_RS18845;old_locus_tag=CCO35_18835 NZ_NPME01000005.1 Protein Homology CDS 358599 359729 . - 0 ID=cds-WP_000332033.1;Parent=gene-CCO35_RS18845;Dbxref=GenBank:WP_000332033.1;Name=WP_000332033.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=CCO35_RS18845;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332033.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 359842 362127 . - . ID=gene-CCO35_RS18850;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=CCO35_RS18850;old_locus_tag=CCO35_18840 NZ_NPME01000005.1 Protein Homology CDS 359842 362127 . - 0 ID=cds-WP_001076494.1;Parent=gene-CCO35_RS18850;Dbxref=GenBank:WP_001076494.1;Name=WP_001076494.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=CCO35_RS18850;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076494.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 362483 363211 . - . ID=gene-CCO35_RS18855;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=CCO35_RS18855;old_locus_tag=CCO35_18845 NZ_NPME01000005.1 Protein Homology CDS 362483 363211 . - 0 ID=cds-WP_001091009.1;Parent=gene-CCO35_RS18855;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=CCO35_RS18855;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 363294 364178 . - . ID=gene-CCO35_RS18860;Name=CCO35_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18860;old_locus_tag=CCO35_18850 NZ_NPME01000005.1 Protein Homology CDS 363294 364178 . - 0 ID=cds-WP_000944714.1;Parent=gene-CCO35_RS18860;Dbxref=GenBank:WP_000944714.1;Name=WP_000944714.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=CCO35_RS18860;product=GntR family transcriptional regulator;protein_id=WP_000944714.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 364228 365553 . + . ID=gene-CCO35_RS18865;Name=CCO35_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18865;old_locus_tag=CCO35_18855 NZ_NPME01000005.1 Protein Homology CDS 364228 365553 . + 0 ID=cds-WP_000098085.1;Parent=gene-CCO35_RS18865;Dbxref=GenBank:WP_000098085.1;Name=WP_000098085.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=CCO35_RS18865;product=MFS transporter;protein_id=WP_000098085.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 365568 366770 . + . ID=gene-CCO35_RS18870;Name=CCO35_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18870;old_locus_tag=CCO35_18860 NZ_NPME01000005.1 Protein Homology CDS 365568 366770 . + 0 ID=cds-WP_000705581.1;Parent=gene-CCO35_RS18870;Dbxref=GenBank:WP_000705581.1;Name=WP_000705581.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=CCO35_RS18870;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705581.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 367180 369816 . + . ID=gene-CCO35_RS18880;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CCO35_RS18880;old_locus_tag=CCO35_18870 NZ_NPME01000005.1 Protein Homology CDS 367180 369816 . + 0 ID=cds-WP_001281271.1;Parent=gene-CCO35_RS18880;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=CCO35_RS18880;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 369934 372780 . + . ID=gene-CCO35_RS18885;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=CCO35_RS18885;old_locus_tag=CCO35_18875 NZ_NPME01000005.1 Protein Homology CDS 369934 372780 . + 0 ID=cds-WP_000876070.1;Parent=gene-CCO35_RS18885;Dbxref=GenBank:WP_000876070.1;Name=WP_000876070.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=CCO35_RS18885;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876070.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 372884 373534 . - . ID=gene-CCO35_RS18890;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=CCO35_RS18890;old_locus_tag=CCO35_18880 NZ_NPME01000005.1 Protein Homology CDS 372884 373534 . - 0 ID=cds-WP_001061919.1;Parent=gene-CCO35_RS18890;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=CCO35_RS18890;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 373551 376220 . - . ID=gene-CCO35_RS18895;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=CCO35_RS18895;old_locus_tag=CCO35_18885 NZ_NPME01000005.1 Protein Homology CDS 373551 376220 . - 0 ID=cds-WP_000083205.1;Parent=gene-CCO35_RS18895;Dbxref=GenBank:WP_000083205.1;Name=WP_000083205.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=CCO35_RS18895;product=phosphotransferase RcsD;protein_id=WP_000083205.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 376948 378084 . + . ID=gene-CCO35_RS18905;Name=CCO35_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18905;old_locus_tag=CCO35_18895 NZ_NPME01000005.1 Protein Homology CDS 376948 378084 . + 0 ID=cds-WP_000865520.1;Parent=gene-CCO35_RS18905;Dbxref=GenBank:WP_000865520.1;Name=WP_000865520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=CCO35_RS18905;product=porin OmpC;protein_id=WP_000865520.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 378199 379251 . + . ID=gene-CCO35_RS18910;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=CCO35_RS18910;old_locus_tag=CCO35_18900 NZ_NPME01000005.1 Protein Homology CDS 378199 379251 . + 0 ID=cds-WP_000784299.1;Parent=gene-CCO35_RS18910;Dbxref=GenBank:WP_000784299.1;Name=WP_000784299.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=CCO35_RS18910;product=FAD:protein FMN transferase ApbE;protein_id=WP_000784299.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 379332 380393 . + . ID=gene-CCO35_RS18915;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=CCO35_RS18915;old_locus_tag=CCO35_18905 NZ_NPME01000005.1 Protein Homology CDS 379332 380393 . + 0 ID=cds-WP_000975970.1;Parent=gene-CCO35_RS18915;Dbxref=GenBank:WP_000975970.1;Name=WP_000975970.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=CCO35_RS18915;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000975970.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 380396 381046 . + . ID=gene-CCO35_RS18920;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=CCO35_RS18920;old_locus_tag=CCO35_18910 NZ_NPME01000005.1 Protein Homology CDS 380396 381046 . + 0 ID=cds-WP_000884989.1;Parent=gene-CCO35_RS18920;Dbxref=GenBank:WP_000884989.1;Name=WP_000884989.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=CCO35_RS18920;product=DNA oxidative demethylase AlkB;protein_id=WP_000884989.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 381122 382765 . + . ID=gene-CCO35_RS18925;Name=CCO35_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18925;old_locus_tag=CCO35_18915 NZ_NPME01000005.1 Protein Homology CDS 381122 382765 . + 0 ID=cds-WP_079846297.1;Parent=gene-CCO35_RS18925;Dbxref=GenBank:WP_079846297.1;Name=WP_079846297.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=CCO35_RS18925;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_079846297.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 382957 383451 . - . ID=gene-CCO35_RS18930;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=CCO35_RS18930;old_locus_tag=CCO35_18920 NZ_NPME01000005.1 Protein Homology CDS 382957 383451 . - 0 ID=cds-WP_001550295.1;Parent=gene-CCO35_RS18930;Dbxref=GenBank:WP_001550295.1;Name=WP_001550295.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=CCO35_RS18930;product=serine protease inhibitor ecotin;protein_id=WP_001550295.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 383865 384356 . + . ID=gene-CCO35_RS18935;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=CCO35_RS18935;old_locus_tag=CCO35_18925 NZ_NPME01000005.1 Protein Homology CDS 383865 384356 . + 0 ID=cds-WP_000228062.1;Parent=gene-CCO35_RS18935;Dbxref=GenBank:WP_000228062.1;Name=WP_000228062.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=CCO35_RS18935;product=ferredoxin-type protein NapF;protein_id=WP_000228062.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 384346 384609 . + . ID=gene-CCO35_RS18940;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=CCO35_RS18940;old_locus_tag=CCO35_18930 NZ_NPME01000005.1 Protein Homology CDS 384346 384609 . + 0 ID=cds-WP_001260056.1;Parent=gene-CCO35_RS18940;Dbxref=GenBank:WP_001260056.1;Name=WP_001260056.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=CCO35_RS18940;product=chaperone NapD;protein_id=WP_001260056.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 384606 387092 . + . ID=gene-CCO35_RS18945;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=CCO35_RS18945;old_locus_tag=CCO35_18935 NZ_NPME01000005.1 Protein Homology CDS 384606 387092 . + 0 ID=cds-WP_000778097.1;Parent=gene-CCO35_RS18945;Dbxref=GenBank:WP_000778097.1;Name=WP_000778097.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=CCO35_RS18945;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778097.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 387099 387794 . + . ID=gene-CCO35_RS18950;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=CCO35_RS18950;old_locus_tag=CCO35_18940 NZ_NPME01000005.1 Protein Homology CDS 387099 387794 . + 0 ID=cds-WP_000091679.1;Parent=gene-CCO35_RS18950;Dbxref=GenBank:WP_000091679.1;Name=WP_000091679.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=CCO35_RS18950;product=ferredoxin-type protein NapG;protein_id=WP_000091679.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 387781 388650 . + . ID=gene-CCO35_RS18955;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=CCO35_RS18955;old_locus_tag=CCO35_18945 NZ_NPME01000005.1 Protein Homology CDS 387781 388650 . + 0 ID=cds-WP_023231230.1;Parent=gene-CCO35_RS18955;Dbxref=GenBank:WP_023231230.1;Name=WP_023231230.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=CCO35_RS18955;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_023231230.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 388766 389215 . + . ID=gene-CCO35_RS18960;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=CCO35_RS18960;old_locus_tag=CCO35_18950 NZ_NPME01000005.1 Protein Homology CDS 388766 389215 . + 0 ID=cds-WP_000835182.1;Parent=gene-CCO35_RS18960;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=CCO35_RS18960;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 389225 389827 . + . ID=gene-CCO35_RS18965;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=CCO35_RS18965;old_locus_tag=CCO35_18955 NZ_NPME01000005.1 Protein Homology CDS 389225 389827 . + 0 ID=cds-WP_000431778.1;Parent=gene-CCO35_RS18965;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=CCO35_RS18965;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11 NZ_NPME01000005.1 RefSeq gene 389848 390026 . + . ID=gene-CCO35_RS18970;Name=CCO35_RS18970;end_range=390026,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18970;old_locus_tag=CCO35_18960;partial=true NZ_NPME01000005.1 Protein Homology CDS 389848 390026 . + 0 ID=cds-WP_024135816.1;Parent=gene-CCO35_RS18970;Dbxref=GenBank:WP_024135816.1;Name=WP_024135816.1;Ontology_term=GO:0005524;end_range=390026,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO35_RS18970;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_024135816.1;transl_table=11 ##sequence-region NZ_NPME01000006.1 1 381817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000006.1 RefSeq region 1 381817 . + . ID=NZ_NPME01000006.1:1..381817;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000006.1 RefSeq gene 1 196 . + . ID=gene-CCO35_RS18975;Name=CCO35_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18975;old_locus_tag=CCO35_18965;partial=true;start_range=.,1 NZ_NPME01000006.1 Protein Homology CDS 1 196 . + 1 ID=cds-WP_367301562.1-2;Parent=gene-CCO35_RS18975;Dbxref=GenBank:WP_367301562.1;Name=WP_367301562.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=CCO35_RS18975;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_367301562.1;start_range=.,1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 318 1544 . + . ID=gene-CCO35_RS18980;Name=CCO35_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18980;old_locus_tag=CCO35_18970 NZ_NPME01000006.1 Protein Homology CDS 318 1544 . + 0 ID=cds-WP_024798146.1;Parent=gene-CCO35_RS18980;Dbxref=GenBank:WP_024798146.1;Name=WP_024798146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=CCO35_RS18980;product=DUF3748 domain-containing protein;protein_id=WP_024798146.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 1546 1878 . - . ID=gene-CCO35_RS18985;Name=CCO35_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS18985;old_locus_tag=CCO35_18975 NZ_NPME01000006.1 Protein Homology CDS 1546 1878 . - 0 ID=cds-WP_001543704.1;Parent=gene-CCO35_RS18985;Dbxref=GenBank:WP_001543704.1;Name=WP_001543704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=CCO35_RS18985;product=YceK/YidQ family lipoprotein;protein_id=WP_001543704.1;transl_table=11 NZ_NPME01000006.1 cmsearch sequence_feature 2121 2194 . + . ID=id-NZ_NPME01000006.1:2121..2194;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPME01000006.1 RefSeq gene 2188 2601 . + . ID=gene-CCO35_RS18990;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=CCO35_RS18990;old_locus_tag=CCO35_18980 NZ_NPME01000006.1 Protein Homology CDS 2188 2601 . + 0 ID=cds-WP_001532742.1;Parent=gene-CCO35_RS18990;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=CCO35_RS18990;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 2711 3139 . + . ID=gene-CCO35_RS18995;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=CCO35_RS18995;old_locus_tag=CCO35_18985 NZ_NPME01000006.1 Protein Homology CDS 2711 3139 . + 0 ID=cds-WP_001246919.1;Parent=gene-CCO35_RS18995;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=CCO35_RS18995;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 3328 4989 . + . ID=gene-CCO35_RS19000;Name=CCO35_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19000;old_locus_tag=CCO35_18990 NZ_NPME01000006.1 Protein Homology CDS 3328 4989 . + 0 ID=cds-WP_094965374.1;Parent=gene-CCO35_RS19000;Dbxref=GenBank:WP_094965374.1;Name=WP_094965374.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=CCO35_RS19000;product=putative transporter;protein_id=WP_094965374.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 5026 5313 . + . ID=gene-CCO35_RS23845;Name=CCO35_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23845 NZ_NPME01000006.1 GeneMarkS-2+ CDS 5026 5313 . + 0 ID=cds-WP_162803878.1;Parent=gene-CCO35_RS23845;Dbxref=GenBank:WP_162803878.1;Name=WP_162803878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO35_RS23845;product=hypothetical protein;protein_id=WP_162803878.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 5433 5780 . + . ID=gene-CCO35_RS19005;Name=CCO35_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19005;old_locus_tag=CCO35_18995 NZ_NPME01000006.1 Protein Homology CDS 5433 5780 . + 0 ID=cds-WP_000703964.1;Parent=gene-CCO35_RS19005;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=CCO35_RS19005;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 5770 6132 . + . ID=gene-CCO35_RS19010;Name=CCO35_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19010;old_locus_tag=CCO35_19000 NZ_NPME01000006.1 Protein Homology CDS 5770 6132 . + 0 ID=cds-WP_001113454.1;Parent=gene-CCO35_RS19010;Dbxref=GenBank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=CCO35_RS19010;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 6129 6659 . + . ID=gene-CCO35_RS19015;Name=CCO35_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19015;old_locus_tag=CCO35_19005 NZ_NPME01000006.1 Protein Homology CDS 6129 6659 . + 0 ID=cds-WP_000147831.1;Parent=gene-CCO35_RS19015;Dbxref=GenBank:WP_000147831.1;Name=WP_000147831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=CCO35_RS19015;product=radical SAM protein;protein_id=WP_000147831.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 6741 8063 . - . ID=gene-CCO35_RS19020;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=CCO35_RS19020;old_locus_tag=CCO35_19010 NZ_NPME01000006.1 Protein Homology CDS 6741 8063 . - 0 ID=cds-WP_000427988.1;Parent=gene-CCO35_RS19020;Dbxref=GenBank:WP_000427988.1;Name=WP_000427988.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=CCO35_RS19020;product=D-serine ammonia-lyase;protein_id=WP_000427988.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 8081 9418 . - . ID=gene-CCO35_RS19025;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=CCO35_RS19025;old_locus_tag=CCO35_19015 NZ_NPME01000006.1 Protein Homology CDS 8081 9418 . - 0 ID=cds-WP_000543317.1;Parent=gene-CCO35_RS19025;Dbxref=GenBank:WP_000543317.1;Name=WP_000543317.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=CCO35_RS19025;product=D-serine transporter DsdX;protein_id=WP_000543317.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 9644 10567 . + . ID=gene-CCO35_RS19030;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=CCO35_RS19030;old_locus_tag=CCO35_19020 NZ_NPME01000006.1 Protein Homology CDS 9644 10567 . + 0 ID=cds-WP_001541637.1;Parent=gene-CCO35_RS19030;Dbxref=GenBank:WP_001541637.1;Name=WP_001541637.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=CCO35_RS19030;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001541637.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 10631 11716 . + . ID=gene-CCO35_RS19035;Name=CCO35_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19035;old_locus_tag=CCO35_19025 NZ_NPME01000006.1 Protein Homology CDS 10631 11716 . + 0 ID=cds-WP_000238920.1;Parent=gene-CCO35_RS19035;Dbxref=GenBank:WP_000238920.1;Name=WP_000238920.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=CCO35_RS19035;product=cellulase family glycosylhydrolase;protein_id=WP_000238920.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 11643 12827 . - . ID=gene-CCO35_RS19040;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=CCO35_RS19040;old_locus_tag=CCO35_19030 NZ_NPME01000006.1 Protein Homology CDS 11643 12827 . - 0 ID=cds-WP_000828737.1;Parent=gene-CCO35_RS19040;Dbxref=GenBank:WP_000828737.1;Name=WP_000828737.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=CCO35_RS19040;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828737.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 13030 13890 . - . ID=gene-CCO35_RS19045;Name=CCO35_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19045;old_locus_tag=CCO35_19035 NZ_NPME01000006.1 Protein Homology CDS 13030 13890 . - 0 ID=cds-WP_072202822.1;Parent=gene-CCO35_RS19045;Dbxref=GenBank:WP_072202822.1;Name=WP_072202822.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=CCO35_RS19045;product=DMT family transporter;protein_id=WP_072202822.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 13983 14072 . - . ID=gene-CCO35_RS19050;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=CCO35_RS19050;old_locus_tag=CCO35_19040 NZ_NPME01000006.1 Protein Homology CDS 13983 14072 . - 0 ID=cds-WP_000117642.1;Parent=gene-CCO35_RS19050;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=CCO35_RS19050;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11 NZ_NPME01000006.1 RefSeq pseudogene 14069 14183 . - . ID=gene-CCO35_RS23735;Name=CCO35_RS23735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS23735;pseudo=true NZ_NPME01000006.1 Protein Homology CDS 14069 14183 . - 0 ID=cds-CCO35_RS23735;Parent=gene-CCO35_RS23735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=CCO35_RS23735;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPME01000006.1 RefSeq gene 14706 14804 . + . ID=gene-CCO35_RS19060;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=CCO35_RS19060;old_locus_tag=CCO35_19050 NZ_NPME01000006.1 Protein Homology CDS 14706 14804 . + 0 ID=cds-WP_001541152.1;Parent=gene-CCO35_RS19060;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=CCO35_RS19060;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 14911 16599 . + . ID=gene-CCO35_RS19065;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CCO35_RS19065;old_locus_tag=CCO35_19055 NZ_NPME01000006.1 Protein Homology CDS 14911 16599 . + 0 ID=cds-WP_000168439.1;Parent=gene-CCO35_RS19065;Dbxref=GenBank:WP_000168439.1;Name=WP_000168439.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=CCO35_RS19065;product=acetolactate synthase large subunit;protein_id=WP_000168439.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 16603 16893 . + . ID=gene-CCO35_RS19070;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO35_RS19070;old_locus_tag=CCO35_19060 NZ_NPME01000006.1 Protein Homology CDS 16603 16893 . + 0 ID=cds-WP_001171826.1;Parent=gene-CCO35_RS19070;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=CCO35_RS19070;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 16895 17680 . - . ID=gene-CCO35_RS19075;Name=CCO35_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19075;old_locus_tag=CCO35_19065 NZ_NPME01000006.1 Protein Homology CDS 16895 17680 . - 0 ID=cds-WP_000448642.1;Parent=gene-CCO35_RS19075;Dbxref=GenBank:WP_000448642.1;Name=WP_000448642.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=CCO35_RS19075;product=DeoR family transcriptional regulator;protein_id=WP_000448642.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 18005 18925 . + . ID=gene-CCO35_RS19080;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO35_RS19080;old_locus_tag=CCO35_19070 NZ_NPME01000006.1 Protein Homology CDS 18005 18925 . + 0 ID=cds-WP_000350272.1;Parent=gene-CCO35_RS19080;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=CCO35_RS19080;product=ribokinase;protein_id=WP_000350272.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 18956 20272 . + . ID=gene-CCO35_RS19085;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO35_RS19085;old_locus_tag=CCO35_19075 NZ_NPME01000006.1 Protein Homology CDS 18956 20272 . + 0 ID=cds-WP_000998359.1;Parent=gene-CCO35_RS19085;Dbxref=GenBank:WP_000998359.1;Name=WP_000998359.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=CCO35_RS19085;product=L-fucose:H+ symporter permease;protein_id=WP_000998359.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 20284 21297 . + . ID=gene-CCO35_RS19090;Name=CCO35_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19090;old_locus_tag=CCO35_19080 NZ_NPME01000006.1 Protein Homology CDS 20284 21297 . + 0 ID=cds-WP_000213192.1;Parent=gene-CCO35_RS19090;Dbxref=GenBank:WP_000213192.1;Name=WP_000213192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=CCO35_RS19090;product=aldose 1-epimerase family protein;protein_id=WP_000213192.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 21372 21962 . + . ID=gene-CCO35_RS19095;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=CCO35_RS19095;old_locus_tag=CCO35_19085 NZ_NPME01000006.1 Protein Homology CDS 21372 21962 . + 0 ID=cds-WP_000633664.1;Parent=gene-CCO35_RS19095;Dbxref=GenBank:WP_000633664.1;Name=WP_000633664.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=CCO35_RS19095;product=transcriptional regulator UhpA;protein_id=WP_000633664.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 21962 23464 . + . ID=gene-CCO35_RS19100;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=CCO35_RS19100;old_locus_tag=CCO35_19090 NZ_NPME01000006.1 Protein Homology CDS 21962 23464 . + 0 ID=cds-WP_031567088.1;Parent=gene-CCO35_RS19100;Dbxref=GenBank:WP_031567088.1;Name=WP_031567088.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=CCO35_RS19100;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_031567088.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 23474 24802 . + . ID=gene-CCO35_RS19105;Name=CCO35_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19105;old_locus_tag=CCO35_19095 NZ_NPME01000006.1 Protein Homology CDS 23474 24802 . + 0 ID=cds-WP_094965375.1;Parent=gene-CCO35_RS19105;Dbxref=GenBank:WP_094965375.1;Name=WP_094965375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=CCO35_RS19105;product=MFS transporter;protein_id=WP_094965375.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 24945 26336 . + . ID=gene-CCO35_RS19110;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CCO35_RS19110;old_locus_tag=CCO35_19100 NZ_NPME01000006.1 Protein Homology CDS 24945 26336 . + 0 ID=cds-WP_000879181.1;Parent=gene-CCO35_RS19110;Dbxref=GenBank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=CCO35_RS19110;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879181.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 26529 26981 . + . ID=gene-CCO35_RS19115;Name=CCO35_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19115;old_locus_tag=CCO35_19105 NZ_NPME01000006.1 Protein Homology CDS 26529 26981 . + 0 ID=cds-WP_001519640.1;Parent=gene-CCO35_RS19115;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=CCO35_RS19115;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 27334 28077 . + . ID=gene-CCO35_RS19120;Name=CCO35_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19120;old_locus_tag=CCO35_19110 NZ_NPME01000006.1 Protein Homology CDS 27334 28077 . + 0 ID=cds-WP_000854957.1;Parent=gene-CCO35_RS19120;Dbxref=GenBank:WP_000854957.1;Name=WP_000854957.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=CCO35_RS19120;product=GntR family transcriptional regulator;protein_id=WP_000854957.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 28095 28568 . + . ID=gene-CCO35_RS19125;Name=CCO35_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19125;old_locus_tag=CCO35_19115 NZ_NPME01000006.1 Protein Homology CDS 28095 28568 . + 0 ID=cds-WP_001152237.1;Parent=gene-CCO35_RS19125;Dbxref=GenBank:WP_001152237.1;Name=WP_001152237.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=CCO35_RS19125;product=PTS sugar transporter subunit IIA;protein_id=WP_001152237.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 28565 28852 . + . ID=gene-CCO35_RS19130;Name=CCO35_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19130;old_locus_tag=CCO35_19120 NZ_NPME01000006.1 Protein Homology CDS 28565 28852 . + 0 ID=cds-WP_000041396.1;Parent=gene-CCO35_RS19130;Dbxref=GenBank:WP_000041396.1;Name=WP_000041396.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=CCO35_RS19130;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 28928 30286 . + . ID=gene-CCO35_RS19135;Name=CCO35_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19135;old_locus_tag=CCO35_19125 NZ_NPME01000006.1 Protein Homology CDS 28928 30286 . + 0 ID=cds-WP_000997826.1;Parent=gene-CCO35_RS19135;Dbxref=GenBank:WP_000997826.1;Name=WP_000997826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=CCO35_RS19135;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997826.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 30279 31763 . + . ID=gene-CCO35_RS19140;Name=CCO35_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19140;old_locus_tag=CCO35_19130 NZ_NPME01000006.1 Protein Homology CDS 30279 31763 . + 0 ID=cds-WP_001113551.1;Parent=gene-CCO35_RS19140;Dbxref=GenBank:WP_001113551.1;Name=WP_001113551.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=CCO35_RS19140;product=FGGY-family carbohydrate kinase;protein_id=WP_001113551.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 31826 32686 . + . ID=gene-CCO35_RS19145;Name=CCO35_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19145;old_locus_tag=CCO35_19135 NZ_NPME01000006.1 Protein Homology CDS 31826 32686 . + 0 ID=cds-WP_001131800.1;Parent=gene-CCO35_RS19145;Dbxref=GenBank:WP_001131800.1;Name=WP_001131800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=CCO35_RS19145;product=class II aldolase;protein_id=WP_001131800.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 32696 32965 . + . ID=gene-CCO35_RS19150;Name=CCO35_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19150;old_locus_tag=CCO35_19140 NZ_NPME01000006.1 Protein Homology CDS 32696 32965 . + 0 ID=cds-WP_000621109.1;Parent=gene-CCO35_RS19150;Dbxref=GenBank:WP_000621109.1;Name=WP_000621109.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=CCO35_RS19150;product=HPr family phosphocarrier protein;protein_id=WP_000621109.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 33127 33288 . + . ID=gene-CCO35_RS23850;Name=CCO35_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS23850 NZ_NPME01000006.1 Protein Homology CDS 33127 33288 . + 0 ID=cds-WP_000343619.1;Parent=gene-CCO35_RS23850;Dbxref=GenBank:WP_000343619.1;Name=WP_000343619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343619.1;locus_tag=CCO35_RS23850;product=hypothetical protein;protein_id=WP_000343619.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 33316 34095 . - . ID=gene-CCO35_RS19155;Name=CCO35_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19155;old_locus_tag=CCO35_19145 NZ_NPME01000006.1 Protein Homology CDS 33316 34095 . - 0 ID=cds-WP_000353909.1;Parent=gene-CCO35_RS19155;Dbxref=GenBank:WP_000353909.1;Name=WP_000353909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912948.1;locus_tag=CCO35_RS19155;product=LEM-3-like GIY-YIG domain-containing protein;protein_id=WP_000353909.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 34280 34603 . - . ID=gene-CCO35_RS19160;Name=CCO35_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19160;old_locus_tag=CCO35_19150 NZ_NPME01000006.1 Protein Homology CDS 34280 34603 . - 0 ID=cds-WP_001274842.1;Parent=gene-CCO35_RS19160;Dbxref=GenBank:WP_001274842.1;Name=WP_001274842.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=CCO35_RS19160;product=helix-turn-helix domain-containing protein;protein_id=WP_001274842.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 34587 34946 . - . ID=gene-CCO35_RS19165;Name=CCO35_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19165;old_locus_tag=CCO35_19155 NZ_NPME01000006.1 Protein Homology CDS 34587 34946 . - 0 ID=cds-WP_001217953.1;Parent=gene-CCO35_RS19165;Dbxref=GenBank:WP_001217953.1;Name=WP_001217953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=CCO35_RS19165;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001217953.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 35162 36355 . + . ID=gene-CCO35_RS19170;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=CCO35_RS19170;old_locus_tag=CCO35_19160 NZ_NPME01000006.1 Protein Homology CDS 35162 36355 . + 0 ID=cds-WP_001004800.1;Parent=gene-CCO35_RS19170;Dbxref=GenBank:WP_001004800.1;Name=WP_001004800.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=CCO35_RS19170;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004800.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 36415 37797 . - . ID=gene-CCO35_RS19175;Name=CCO35_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19175;old_locus_tag=CCO35_19165 NZ_NPME01000006.1 Protein Homology CDS 36415 37797 . - 0 ID=cds-WP_031567113.1;Parent=gene-CCO35_RS19175;Dbxref=GenBank:WP_031567113.1;Name=WP_031567113.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=CCO35_RS19175;product=glycoside hydrolase family 1 protein;protein_id=WP_031567113.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 37903 38196 . - . ID=gene-CCO35_RS19180;Name=CCO35_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19180;old_locus_tag=CCO35_19170 NZ_NPME01000006.1 Protein Homology CDS 37903 38196 . - 0 ID=cds-WP_000824215.1;Parent=gene-CCO35_RS19180;Dbxref=GenBank:WP_000824215.1;Name=WP_000824215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=CCO35_RS19180;product=YicS family protein;protein_id=WP_000824215.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 38393 41191 . + . ID=gene-CCO35_RS19185;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=CCO35_RS19185;old_locus_tag=CCO35_19175 NZ_NPME01000006.1 Protein Homology CDS 38393 41191 . + 0 ID=cds-WP_031567119.1;Parent=gene-CCO35_RS19185;Dbxref=GenBank:WP_031567119.1;Name=WP_031567119.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=CCO35_RS19185;product=transcriptional regulator DagR;protein_id=WP_031567119.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 41410 41835 . + . ID=gene-CCO35_RS19190;Name=CCO35_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19190;old_locus_tag=CCO35_19180 NZ_NPME01000006.1 Protein Homology CDS 41410 41835 . + 0 ID=cds-WP_000214106.1;Parent=gene-CCO35_RS19190;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=CCO35_RS19190;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 41846 42331 . + . ID=gene-CCO35_RS19195;Name=CCO35_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19195;old_locus_tag=CCO35_19185 NZ_NPME01000006.1 Protein Homology CDS 41846 42331 . + 0 ID=cds-WP_001284295.1;Parent=gene-CCO35_RS19195;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=CCO35_RS19195;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 42477 43226 . + . ID=gene-CCO35_RS19200;Name=CCO35_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19200;old_locus_tag=CCO35_19190 NZ_NPME01000006.1 Protein Homology CDS 42477 43226 . + 0 ID=cds-WP_000380259.1;Parent=gene-CCO35_RS19200;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=CCO35_RS19200;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 43223 44083 . + . ID=gene-CCO35_RS19205;Name=CCO35_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19205;old_locus_tag=CCO35_19195 NZ_NPME01000006.1 Protein Homology CDS 43223 44083 . + 0 ID=cds-WP_001614580.1;Parent=gene-CCO35_RS19205;Dbxref=GenBank:WP_001614580.1;Name=WP_001614580.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=CCO35_RS19205;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001614580.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 44087 45196 . + . ID=gene-CCO35_RS19210;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=CCO35_RS19210;old_locus_tag=CCO35_19200 NZ_NPME01000006.1 Protein Homology CDS 44087 45196 . + 0 ID=cds-WP_031567125.1;Parent=gene-CCO35_RS19210;Dbxref=GenBank:WP_031567125.1;Name=WP_031567125.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=CCO35_RS19210;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_031567125.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 45183 45926 . + . ID=gene-CCO35_RS19215;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO35_RS19215;old_locus_tag=CCO35_19205 NZ_NPME01000006.1 Protein Homology CDS 45183 45926 . + 0 ID=cds-WP_001186149.1;Parent=gene-CCO35_RS19215;Dbxref=GenBank:WP_001186149.1;Name=WP_001186149.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=CCO35_RS19215;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186149.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 46162 47091 . + . ID=gene-CCO35_RS19220;Name=CCO35_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19220;old_locus_tag=CCO35_19210 NZ_NPME01000006.1 Protein Homology CDS 46162 47091 . + 0 ID=cds-WP_000749536.1;Parent=gene-CCO35_RS19220;Dbxref=GenBank:WP_000749536.1;Name=WP_000749536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=CCO35_RS19220;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749536.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 47134 48036 . - . ID=gene-CCO35_RS19225;Name=CCO35_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19225;old_locus_tag=CCO35_19215 NZ_NPME01000006.1 Protein Homology CDS 47134 48036 . - 0 ID=cds-WP_000535970.1;Parent=gene-CCO35_RS19225;Dbxref=GenBank:WP_000535970.1;Name=WP_000535970.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=CCO35_RS19225;product=EamA family transporter;protein_id=WP_000535970.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 48542 49237 . + . ID=gene-CCO35_RS19230;Name=CCO35_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19230;old_locus_tag=CCO35_19220 NZ_NPME01000006.1 Protein Homology CDS 48542 49237 . + 0 ID=cds-WP_000392699.1;Parent=gene-CCO35_RS19230;Dbxref=GenBank:WP_000392699.1;Name=WP_000392699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=CCO35_RS19230;product=MgtC family protein;protein_id=WP_000392699.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 49458 52184 . + . ID=gene-CCO35_RS19235;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO35_RS19235;old_locus_tag=CCO35_19225 NZ_NPME01000006.1 Protein Homology CDS 49458 52184 . + 0 ID=cds-WP_031567135.1;Parent=gene-CCO35_RS19235;Dbxref=GenBank:WP_031567135.1;Name=WP_031567135.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=CCO35_RS19235;product=magnesium-translocating P-type ATPase;protein_id=WP_031567135.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 52206 52298 . + . ID=gene-CCO35_RS19240;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=CCO35_RS19240;old_locus_tag=CCO35_19230 NZ_NPME01000006.1 Protein Homology CDS 52206 52298 . + 0 ID=cds-WP_001082118.1;Parent=gene-CCO35_RS19240;Dbxref=GenBank:WP_001082118.1;Name=WP_001082118.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082119.1;locus_tag=CCO35_RS19240;product=protein MgtR;protein_id=WP_001082118.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 52311 52397 . + . ID=gene-CCO35_RS24210;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=CCO35_RS24210 NZ_NPME01000006.1 Protein Homology CDS 52311 52397 . + 0 ID=cds-WP_252515021.1;Parent=gene-CCO35_RS24210;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=CCO35_RS24210;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 52499 52978 . + . ID=gene-CCO35_RS19245;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=CCO35_RS19245;old_locus_tag=CCO35_19235 NZ_NPME01000006.1 Protein Homology CDS 52499 52978 . + 0 ID=cds-WP_001065322.1;Parent=gene-CCO35_RS19245;Dbxref=GenBank:WP_001065322.1;Name=WP_001065322.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=CCO35_RS19245;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065322.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 53141 53821 . - . ID=gene-CCO35_RS19255;Name=CCO35_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19255;old_locus_tag=CCO35_19245 NZ_NPME01000006.1 Protein Homology CDS 53141 53821 . - 0 ID=cds-WP_000106461.1;Parent=gene-CCO35_RS19255;Dbxref=GenBank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=CCO35_RS19255;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 54607 55464 . + . ID=gene-CCO35_RS19265;Name=CCO35_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19265;old_locus_tag=CCO35_19255 NZ_NPME01000006.1 Protein Homology CDS 54607 55464 . + 0 ID=cds-WP_001278063.1;Parent=gene-CCO35_RS19265;Dbxref=GenBank:WP_001278063.1;Name=WP_001278063.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=CCO35_RS19265;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001278063.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 55475 55939 . + . ID=gene-CCO35_RS19270;Name=CCO35_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19270;old_locus_tag=CCO35_19260 NZ_NPME01000006.1 Protein Homology CDS 55475 55939 . + 0 ID=cds-WP_023213975.1;Parent=gene-CCO35_RS19270;Dbxref=GenBank:WP_023213975.1;Name=WP_023213975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=CCO35_RS19270;product=hypothetical protein;protein_id=WP_023213975.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 56034 58901 . - . ID=gene-CCO35_RS19275;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=CCO35_RS19275;old_locus_tag=CCO35_19265 NZ_NPME01000006.1 Protein Homology CDS 56034 58901 . - 0 ID=cds-WP_031567144.1;Parent=gene-CCO35_RS19275;Dbxref=GenBank:WP_031567144.1;Name=WP_031567144.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=CCO35_RS19275;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_031567144.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 58976 59593 . - . ID=gene-CCO35_RS19280;Name=CCO35_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19280;old_locus_tag=CCO35_19270 NZ_NPME01000006.1 Protein Homology CDS 58976 59593 . - 0 ID=cds-WP_000984808.1;Parent=gene-CCO35_RS19280;Dbxref=GenBank:WP_000984808.1;Name=WP_000984808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=CCO35_RS19280;product=transcriptional regulator;protein_id=WP_000984808.1;transl_table=11 NZ_NPME01000006.1 RefSeq pseudogene 60349 60459 . - . ID=gene-CCO35_RS24145;Name=CCO35_RS24145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24145;partial=true;pseudo=true;start_range=.,60349 NZ_NPME01000006.1 Protein Homology CDS 60349 60459 . - 0 ID=cds-CCO35_RS24145;Parent=gene-CCO35_RS24145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=CCO35_RS24145;partial=true;product=transposase;pseudo=true;start_range=.,60349;transl_table=11 NZ_NPME01000006.1 RefSeq pseudogene 60845 61185 . + . ID=gene-CCO35_RS19285;Name=CCO35_RS19285;end_range=61185,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS19285;old_locus_tag=CCO35_19275;partial=true;pseudo=true NZ_NPME01000006.1 Protein Homology CDS 60845 61185 . + 0 ID=cds-CCO35_RS19285;Parent=gene-CCO35_RS19285;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=61185,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611921.1;locus_tag=CCO35_RS19285;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_NPME01000006.1 RefSeq gene 61221 61315 . - . ID=gene-CCO35_RS19290;Name=CCO35_RS19290;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS19290;old_locus_tag=CCO35_19280 NZ_NPME01000006.1 tRNAscan-SE tRNA 61221 61315 . - . ID=rna-CCO35_RS19290;Parent=gene-CCO35_RS19290;anticodon=(pos:complement(61279..61281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS19290;product=tRNA-Sec NZ_NPME01000006.1 tRNAscan-SE exon 61221 61315 . - . ID=exon-CCO35_RS19290-1;Parent=rna-CCO35_RS19290;anticodon=(pos:complement(61279..61281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS19290;product=tRNA-Sec NZ_NPME01000006.1 RefSeq gene 61603 62985 . + . ID=gene-CCO35_RS19295;Name=CCO35_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19295;old_locus_tag=CCO35_19285 NZ_NPME01000006.1 Protein Homology CDS 61603 62985 . + 0 ID=cds-WP_000834259.1;Parent=gene-CCO35_RS19295;Dbxref=GenBank:WP_000834259.1;Name=WP_000834259.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=CCO35_RS19295;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834259.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 62997 65315 . + . ID=gene-CCO35_RS19300;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=CCO35_RS19300;old_locus_tag=CCO35_19290 NZ_NPME01000006.1 Protein Homology CDS 62997 65315 . + 0 ID=cds-WP_031567156.1;Parent=gene-CCO35_RS19300;Dbxref=GenBank:WP_031567156.1;Name=WP_031567156.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=CCO35_RS19300;product=alpha-xylosidase;protein_id=WP_031567156.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 65418 67127 . - . ID=gene-CCO35_RS19305;Name=CCO35_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19305;old_locus_tag=CCO35_19295 NZ_NPME01000006.1 Protein Homology CDS 65418 67127 . - 0 ID=cds-WP_000766646.1;Parent=gene-CCO35_RS19305;Dbxref=GenBank:WP_000766646.1;Name=WP_000766646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=CCO35_RS19305;product=AsmA family protein;protein_id=WP_000766646.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 67248 68639 . - . ID=gene-CCO35_RS19310;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=CCO35_RS19310;old_locus_tag=CCO35_19300 NZ_NPME01000006.1 Protein Homology CDS 67248 68639 . - 0 ID=cds-WP_000115428.1;Parent=gene-CCO35_RS19310;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=CCO35_RS19310;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 68868 70073 . + . ID=gene-CCO35_RS19315;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CCO35_RS19315;old_locus_tag=CCO35_19305 NZ_NPME01000006.1 Protein Homology CDS 68868 70073 . + 0 ID=cds-WP_000462249.1;Parent=gene-CCO35_RS19315;Dbxref=GenBank:WP_000462249.1;Name=WP_000462249.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=CCO35_RS19315;product=sodium/glutamate symporter;protein_id=WP_000462249.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 70109 72190 . - . ID=gene-CCO35_RS19320;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CCO35_RS19320;old_locus_tag=CCO35_19310 NZ_NPME01000006.1 Protein Homology CDS 70109 72190 . - 0 ID=cds-WP_000016757.1;Parent=gene-CCO35_RS19320;Dbxref=GenBank:WP_000016757.1;Name=WP_000016757.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=CCO35_RS19320;product=ATP-dependent DNA helicase RecG;protein_id=WP_000016757.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 72196 72885 . - . ID=gene-CCO35_RS19325;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=CCO35_RS19325;old_locus_tag=CCO35_19315 NZ_NPME01000006.1 Protein Homology CDS 72196 72885 . - 0 ID=cds-WP_001068436.1;Parent=gene-CCO35_RS19325;Dbxref=GenBank:WP_001068436.1;Name=WP_001068436.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=CCO35_RS19325;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068436.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 72890 75001 . - . ID=gene-CCO35_RS19330;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=CCO35_RS19330;old_locus_tag=CCO35_19320 NZ_NPME01000006.1 Protein Homology CDS 72890 75001 . - 0 ID=cds-WP_000280481.1;Parent=gene-CCO35_RS19330;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=CCO35_RS19330;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 75020 75295 . - . ID=gene-CCO35_RS19335;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CCO35_RS19335;old_locus_tag=CCO35_19325 NZ_NPME01000006.1 Protein Homology CDS 75020 75295 . - 0 ID=cds-WP_000135058.1;Parent=gene-CCO35_RS19335;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=CCO35_RS19335;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 75350 75973 . - . ID=gene-CCO35_RS19340;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CCO35_RS19340;old_locus_tag=CCO35_19330 NZ_NPME01000006.1 Protein Homology CDS 75350 75973 . - 0 ID=cds-WP_000046966.1;Parent=gene-CCO35_RS19340;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=CCO35_RS19340;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 76230 77915 . + . ID=gene-CCO35_RS19345;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=CCO35_RS19345;old_locus_tag=CCO35_19335 NZ_NPME01000006.1 Protein Homology CDS 76230 77915 . + 0 ID=cds-WP_001241852.1;Parent=gene-CCO35_RS19345;Dbxref=GenBank:WP_001241852.1;Name=WP_001241852.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=CCO35_RS19345;product=NAD-dependent DNA ligase LigB;protein_id=WP_001241852.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 77912 78529 . - . ID=gene-CCO35_RS19350;Name=CCO35_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19350;old_locus_tag=CCO35_19340 NZ_NPME01000006.1 Protein Homology CDS 77912 78529 . - 0 ID=cds-WP_000924334.1;Parent=gene-CCO35_RS19350;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=CCO35_RS19350;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 78780 79661 . - . ID=gene-CCO35_RS19355;Name=CCO35_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19355;old_locus_tag=CCO35_19345 NZ_NPME01000006.1 Protein Homology CDS 78780 79661 . - 0 ID=cds-WP_001082972.1;Parent=gene-CCO35_RS19355;Dbxref=GenBank:WP_001082972.1;Name=WP_001082972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=CCO35_RS19355;product=HARLDQ motif MBL-fold protein;protein_id=WP_001082972.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 79735 80637 . + . ID=gene-CCO35_RS19360;Name=CCO35_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19360;old_locus_tag=CCO35_19350 NZ_NPME01000006.1 Protein Homology CDS 79735 80637 . + 0 ID=cds-WP_031567181.1;Parent=gene-CCO35_RS19360;Dbxref=GenBank:WP_031567181.1;Name=WP_031567181.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=CCO35_RS19360;product=LysR family transcriptional regulator;protein_id=WP_031567181.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 80687 81550 . - . ID=gene-CCO35_RS19365;Name=CCO35_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19365;old_locus_tag=CCO35_19355 NZ_NPME01000006.1 Protein Homology CDS 80687 81550 . - 0 ID=cds-WP_000621352.1;Parent=gene-CCO35_RS19365;Dbxref=GenBank:WP_000621352.1;Name=WP_000621352.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=CCO35_RS19365;product=YicC/YloC family endoribonuclease;protein_id=WP_000621352.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 81676 82392 . + . ID=gene-CCO35_RS19375;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=CCO35_RS19375;old_locus_tag=CCO35_19365 NZ_NPME01000006.1 Protein Homology CDS 81676 82392 . + 0 ID=cds-WP_001247078.1;Parent=gene-CCO35_RS19375;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=CCO35_RS19375;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 82471 83112 . + . ID=gene-CCO35_RS19380;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CCO35_RS19380;old_locus_tag=CCO35_19370 NZ_NPME01000006.1 Protein Homology CDS 82471 83112 . + 0 ID=cds-WP_000806167.1;Parent=gene-CCO35_RS19380;Dbxref=GenBank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=CCO35_RS19380;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 83190 83786 . - . ID=gene-CCO35_RS19385;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=CCO35_RS19385;old_locus_tag=CCO35_19375 NZ_NPME01000006.1 Protein Homology CDS 83190 83786 . - 0 ID=cds-WP_000818607.1;Parent=gene-CCO35_RS19385;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=CCO35_RS19385;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 83894 84352 . - . ID=gene-CCO35_RS19390;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=CCO35_RS19390;old_locus_tag=CCO35_19380 NZ_NPME01000006.1 Protein Homology CDS 83894 84352 . - 0 ID=cds-WP_000976078.1;Parent=gene-CCO35_RS19390;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=CCO35_RS19390;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 84330 85550 . - . ID=gene-CCO35_RS19395;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CCO35_RS19395;old_locus_tag=CCO35_19385 NZ_NPME01000006.1 Protein Homology CDS 84330 85550 . - 0 ID=cds-WP_031567194.1;Parent=gene-CCO35_RS19395;Dbxref=GenBank:WP_031567194.1;Name=WP_031567194.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=CCO35_RS19395;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_031567194.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 85726 86391 . + . ID=gene-CCO35_RS19400;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CCO35_RS19400;old_locus_tag=CCO35_19390 NZ_NPME01000006.1 Protein Homology CDS 85726 86391 . + 0 ID=cds-WP_000380129.1;Parent=gene-CCO35_RS19400;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=CCO35_RS19400;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 86609 86845 . + . ID=gene-CCO35_RS19405;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CCO35_RS19405;old_locus_tag=CCO35_19395 NZ_NPME01000006.1 Protein Homology CDS 86609 86845 . + 0 ID=cds-WP_001519051.1;Parent=gene-CCO35_RS19405;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=CCO35_RS19405;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 86866 87033 . + . ID=gene-CCO35_RS19410;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CCO35_RS19410;old_locus_tag=CCO35_19400 NZ_NPME01000006.1 Protein Homology CDS 86866 87033 . + 0 ID=cds-WP_001051798.1;Parent=gene-CCO35_RS19410;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=CCO35_RS19410;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 87131 87940 . + . ID=gene-CCO35_RS19415;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CCO35_RS19415;old_locus_tag=CCO35_19405 NZ_NPME01000006.1 Protein Homology CDS 87131 87940 . + 0 ID=cds-WP_001114508.1;Parent=gene-CCO35_RS19415;Dbxref=GenBank:WP_001114508.1;Name=WP_001114508.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=CCO35_RS19415;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114508.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 87968 88447 . - . ID=gene-CCO35_RS19420;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CCO35_RS19420;old_locus_tag=CCO35_19410 NZ_NPME01000006.1 Protein Homology CDS 87968 88447 . - 0 ID=cds-WP_001171884.1;Parent=gene-CCO35_RS19420;Dbxref=GenBank:WP_001171884.1;Name=WP_001171884.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=CCO35_RS19420;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171884.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 88456 89733 . - . ID=gene-CCO35_RS19425;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=CCO35_RS19425;old_locus_tag=CCO35_19415 NZ_NPME01000006.1 Protein Homology CDS 88456 89733 . - 0 ID=cds-WP_000891580.1;Parent=gene-CCO35_RS19425;Dbxref=GenBank:WP_000891580.1;Name=WP_000891580.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=CCO35_RS19425;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891580.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 90142 91212 . + . ID=gene-CCO35_RS19430;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=CCO35_RS19430;old_locus_tag=CCO35_19420 NZ_NPME01000006.1 Protein Homology CDS 90142 91212 . + 0 ID=cds-WP_071985502.1;Parent=gene-CCO35_RS19430;Dbxref=GenBank:WP_071985502.1;Name=WP_071985502.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=CCO35_RS19430;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_071985502.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 91209 92333 . + . ID=gene-CCO35_RS19435;Name=CCO35_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19435;old_locus_tag=CCO35_19425 NZ_NPME01000006.1 Protein Homology CDS 91209 92333 . + 0 ID=cds-WP_001261579.1;Parent=gene-CCO35_RS19435;Dbxref=GenBank:WP_001261579.1;Name=WP_001261579.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=CCO35_RS19435;product=glycosyltransferase family 4 protein;protein_id=WP_001261579.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 92326 93123 . + . ID=gene-CCO35_RS19440;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=CCO35_RS19440;old_locus_tag=CCO35_19430 NZ_NPME01000006.1 Protein Homology CDS 92326 93123 . + 0 ID=cds-WP_000229821.1;Parent=gene-CCO35_RS19440;Dbxref=GenBank:WP_000229821.1;Name=WP_000229821.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=CCO35_RS19440;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229821.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 93178 94101 . + . ID=gene-CCO35_RS19445;Name=CCO35_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19445;old_locus_tag=CCO35_19435 NZ_NPME01000006.1 Protein Homology CDS 93178 94101 . + 0 ID=cds-WP_000183407.1;Parent=gene-CCO35_RS19445;Dbxref=GenBank:WP_000183407.1;Name=WP_000183407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280506.1;locus_tag=CCO35_RS19445;product=glycosyltransferase family 52;protein_id=WP_000183407.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 94187 95266 . + . ID=gene-CCO35_RS19450;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=CCO35_RS19450;old_locus_tag=CCO35_19440 NZ_NPME01000006.1 Protein Homology CDS 94187 95266 . + 0 ID=cds-WP_000683982.1;Parent=gene-CCO35_RS19450;Dbxref=GenBank:WP_000683982.1;Name=WP_000683982.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=CCO35_RS19450;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_000683982.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 95272 96285 . + . ID=gene-CCO35_RS19455;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=CCO35_RS19455;old_locus_tag=CCO35_19445 NZ_NPME01000006.1 Protein Homology CDS 95272 96285 . + 0 ID=cds-WP_000088482.1;Parent=gene-CCO35_RS19455;Dbxref=GenBank:WP_000088482.1;Name=WP_000088482.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=CCO35_RS19455;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088482.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 96303 97316 . + . ID=gene-CCO35_RS19460;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=CCO35_RS19460;old_locus_tag=CCO35_19450 NZ_NPME01000006.1 Protein Homology CDS 96303 97316 . + 0 ID=cds-WP_000376851.1;Parent=gene-CCO35_RS19460;Dbxref=GenBank:WP_000376851.1;Name=WP_000376851.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=CCO35_RS19460;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_000376851.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 97339 98037 . + . ID=gene-CCO35_RS19465;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=CCO35_RS19465;old_locus_tag=CCO35_19455 NZ_NPME01000006.1 Protein Homology CDS 97339 98037 . + 0 ID=cds-WP_000582809.1;Parent=gene-CCO35_RS19465;Dbxref=GenBank:WP_000582809.1;Name=WP_000582809.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=CCO35_RS19465;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582809.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 98187 98996 . + . ID=gene-CCO35_RS19470;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=CCO35_RS19470;old_locus_tag=CCO35_19460 NZ_NPME01000006.1 Protein Homology CDS 98187 98996 . + 0 ID=cds-WP_000536017.1;Parent=gene-CCO35_RS19470;Dbxref=GenBank:WP_000536017.1;Name=WP_000536017.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=CCO35_RS19470;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536017.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 99079 100224 . + . ID=gene-CCO35_RS19475;Name=CCO35_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19475;old_locus_tag=CCO35_19465 NZ_NPME01000006.1 Protein Homology CDS 99079 100224 . + 0 ID=cds-WP_000591836.1;Parent=gene-CCO35_RS19475;Dbxref=GenBank:WP_000591836.1;Name=WP_000591836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=CCO35_RS19475;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591836.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 100281 101495 . - . ID=gene-CCO35_RS19480;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=CCO35_RS19480;old_locus_tag=CCO35_19470 NZ_NPME01000006.1 Protein Homology CDS 100281 101495 . - 0 ID=cds-WP_031567239.1;Parent=gene-CCO35_RS19480;Dbxref=GenBank:WP_031567239.1;Name=WP_031567239.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=CCO35_RS19480;product=O-antigen ligase RfaL;protein_id=WP_031567239.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 101535 102488 . - . ID=gene-CCO35_RS19485;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=CCO35_RS19485;old_locus_tag=CCO35_19475 NZ_NPME01000006.1 Protein Homology CDS 101535 102488 . - 0 ID=cds-WP_001221411.1;Parent=gene-CCO35_RS19485;Dbxref=GenBank:WP_001221411.1;Name=WP_001221411.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=CCO35_RS19485;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001221411.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 102488 103534 . - . ID=gene-CCO35_RS19490;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=CCO35_RS19490;old_locus_tag=CCO35_19480 NZ_NPME01000006.1 Protein Homology CDS 102488 103534 . - 0 ID=cds-WP_000699196.1;Parent=gene-CCO35_RS19490;Dbxref=GenBank:WP_000699196.1;Name=WP_000699196.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=CCO35_RS19490;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699196.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 103537 104469 . - . ID=gene-CCO35_RS19495;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=CCO35_RS19495;old_locus_tag=CCO35_19485 NZ_NPME01000006.1 Protein Homology CDS 103537 104469 . - 0 ID=cds-WP_000587771.1;Parent=gene-CCO35_RS19495;Dbxref=GenBank:WP_000587771.1;Name=WP_000587771.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=CCO35_RS19495;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 104672 105868 . + . ID=gene-CCO35_RS19500;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=CCO35_RS19500;old_locus_tag=CCO35_19490 NZ_NPME01000006.1 Protein Homology CDS 104672 105868 . + 0 ID=cds-WP_001213790.1;Parent=gene-CCO35_RS19500;Dbxref=GenBank:WP_001213790.1;Name=WP_001213790.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=CCO35_RS19500;product=glycine C-acetyltransferase;protein_id=WP_001213790.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 105878 106903 . + . ID=gene-CCO35_RS19505;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=CCO35_RS19505;old_locus_tag=CCO35_19495 NZ_NPME01000006.1 Protein Homology CDS 105878 106903 . + 0 ID=cds-WP_000645990.1;Parent=gene-CCO35_RS19505;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=CCO35_RS19505;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 107196 108230 . + . ID=gene-CCO35_RS19510;Name=CCO35_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19510;old_locus_tag=CCO35_19500 NZ_NPME01000006.1 Protein Homology CDS 107196 108230 . + 0 ID=cds-WP_000798195.1;Parent=gene-CCO35_RS19510;Dbxref=GenBank:WP_000798195.1;Name=WP_000798195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=CCO35_RS19510;product=glycosyltransferase;protein_id=WP_000798195.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 108217 109179 . - . ID=gene-CCO35_RS19515;Name=CCO35_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19515;old_locus_tag=CCO35_19505 NZ_NPME01000006.1 Protein Homology CDS 108217 109179 . - 0 ID=cds-WP_001135519.1;Parent=gene-CCO35_RS19515;Dbxref=GenBank:WP_001135519.1;Name=WP_001135519.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=CCO35_RS19515;product=divergent polysaccharide deacetylase family protein;protein_id=WP_001135519.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 109183 110442 . - . ID=gene-CCO35_RS19520;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=CCO35_RS19520;old_locus_tag=CCO35_19510 NZ_NPME01000006.1 Protein Homology CDS 109183 110442 . - 0 ID=cds-WP_058814511.1;Parent=gene-CCO35_RS19520;Dbxref=GenBank:WP_058814511.1;Name=WP_058814511.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=CCO35_RS19520;product=murein hydrolase activator EnvC;protein_id=WP_058814511.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 110476 112020 . - . ID=gene-CCO35_RS19525;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=CCO35_RS19525;old_locus_tag=CCO35_19515 NZ_NPME01000006.1 Protein Homology CDS 110476 112020 . - 0 ID=cds-WP_000116587.1;Parent=gene-CCO35_RS19525;Dbxref=GenBank:WP_000116587.1;Name=WP_000116587.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=CCO35_RS19525;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116587.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 112268 112699 . + . ID=gene-CCO35_RS19530;Name=CCO35_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19530;old_locus_tag=CCO35_19520 NZ_NPME01000006.1 Protein Homology CDS 112268 112699 . + 0 ID=cds-WP_001156179.1;Parent=gene-CCO35_RS19530;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=CCO35_RS19530;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 112785 113036 . + . ID=gene-CCO35_RS19535;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=CCO35_RS19535;old_locus_tag=CCO35_19525 NZ_NPME01000006.1 Protein Homology CDS 112785 113036 . + 0 ID=cds-WP_001273795.1;Parent=gene-CCO35_RS19535;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=CCO35_RS19535;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 113080 113547 . + . ID=gene-CCO35_RS19540;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=CCO35_RS19540;old_locus_tag=CCO35_19530 NZ_NPME01000006.1 Protein Homology CDS 113080 113547 . + 0 ID=cds-WP_000003370.1;Parent=gene-CCO35_RS19540;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=CCO35_RS19540;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 113547 114566 . + . ID=gene-CCO35_RS19545;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=CCO35_RS19545;old_locus_tag=CCO35_19535 NZ_NPME01000006.1 Protein Homology CDS 113547 114566 . + 0 ID=cds-WP_001076597.1;Parent=gene-CCO35_RS19545;Dbxref=GenBank:WP_001076597.1;Name=WP_001076597.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=CCO35_RS19545;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076597.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 114644 115465 . + . ID=gene-CCO35_RS19550;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CCO35_RS19550;old_locus_tag=CCO35_19540 NZ_NPME01000006.1 Protein Homology CDS 114644 115465 . + 0 ID=cds-WP_001112114.1;Parent=gene-CCO35_RS19550;Dbxref=GenBank:WP_001112114.1;Name=WP_001112114.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=CCO35_RS19550;product=serine O-acetyltransferase;protein_id=WP_001112114.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 115648 116121 . - . ID=gene-CCO35_RS19555;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CCO35_RS19555;old_locus_tag=CCO35_19545 NZ_NPME01000006.1 Protein Homology CDS 115648 116121 . - 0 ID=cds-WP_031567251.1;Parent=gene-CCO35_RS19555;Dbxref=GenBank:WP_031567251.1;Name=WP_031567251.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=CCO35_RS19555;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_031567251.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 116186 117376 . - . ID=gene-CCO35_RS19560;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=CCO35_RS19560;old_locus_tag=CCO35_19550 NZ_NPME01000006.1 Protein Homology CDS 116186 117376 . - 0 ID=cds-WP_000587001.1;Parent=gene-CCO35_RS19560;Dbxref=GenBank:WP_000587001.1;Name=WP_000587001.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=CCO35_RS19560;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_000587001.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 117373 118149 . - . ID=gene-CCO35_RS19565;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=CCO35_RS19565;old_locus_tag=CCO35_19555 NZ_NPME01000006.1 Protein Homology CDS 117373 118149 . - 0 ID=cds-WP_000636700.1;Parent=gene-CCO35_RS19565;Dbxref=GenBank:WP_000636700.1;Name=WP_000636700.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=CCO35_RS19565;product=transcriptional regulator LldR;protein_id=WP_000636700.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 118146 119801 . - . ID=gene-CCO35_RS19570;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=CCO35_RS19570;old_locus_tag=CCO35_19560 NZ_NPME01000006.1 Protein Homology CDS 118146 119801 . - 0 ID=cds-WP_001055308.1;Parent=gene-CCO35_RS19570;Dbxref=GenBank:WP_001055308.1;Name=WP_001055308.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=CCO35_RS19570;product=L-lactate permease;protein_id=WP_001055308.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 120100 124443 . - . ID=gene-CCO35_RS19575;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=CCO35_RS19575;old_locus_tag=CCO35_19565 NZ_NPME01000006.1 Protein Homology CDS 120100 124443 . - 0 ID=cds-WP_031567258.1;Parent=gene-CCO35_RS19575;Dbxref=GenBank:WP_031567258.1;Name=WP_031567258.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=CCO35_RS19575;product=trimeric autotransporter adhesin SadA;protein_id=WP_031567258.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 124487 125128 . - . ID=gene-CCO35_RS19580;Name=CCO35_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19580;old_locus_tag=CCO35_19570 NZ_NPME01000006.1 Protein Homology CDS 124487 125128 . - 0 ID=cds-WP_000549451.1;Parent=gene-CCO35_RS19580;Dbxref=GenBank:WP_000549451.1;Name=WP_000549451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=CCO35_RS19580;product=DUF3251 domain-containing protein;protein_id=WP_000549451.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 125616 125978 . - . ID=gene-CCO35_RS19590;Name=CCO35_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19590;old_locus_tag=CCO35_19580 NZ_NPME01000006.1 Protein Homology CDS 125616 125978 . - 0 ID=cds-WP_000665687.1;Parent=gene-CCO35_RS19590;Dbxref=GenBank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=CCO35_RS19590;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 126269 126478 . + . ID=gene-CCO35_RS19595;Name=CCO35_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19595;old_locus_tag=CCO35_19585 NZ_NPME01000006.1 Protein Homology CDS 126269 126478 . + 0 ID=cds-WP_001062558.1;Parent=gene-CCO35_RS19595;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=CCO35_RS19595;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 126488 127078 . - . ID=gene-CCO35_RS19600;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=CCO35_RS19600;old_locus_tag=CCO35_19590 NZ_NPME01000006.1 Protein Homology CDS 126488 127078 . - 0 ID=cds-WP_000193201.1;Parent=gene-CCO35_RS19600;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=CCO35_RS19600;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 127075 128223 . - . ID=gene-CCO35_RS19605;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=CCO35_RS19605;old_locus_tag=CCO35_19595 NZ_NPME01000006.1 Protein Homology CDS 127075 128223 . - 0 ID=cds-WP_000645385.1;Parent=gene-CCO35_RS19605;Dbxref=GenBank:WP_000645385.1;Name=WP_000645385.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=CCO35_RS19605;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645385.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 128444 130360 . - . ID=gene-CCO35_RS19615;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=CCO35_RS19615;old_locus_tag=CCO35_19605 NZ_NPME01000006.1 Protein Homology CDS 128444 130360 . - 0 ID=cds-WP_000093290.1;Parent=gene-CCO35_RS19615;Dbxref=GenBank:WP_000093290.1;Name=WP_000093290.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=CCO35_RS19615;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093290.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 130837 131445 . + . ID=gene-CCO35_RS19625;Name=CCO35_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19625;old_locus_tag=CCO35_19615 NZ_NPME01000006.1 Protein Homology CDS 130837 131445 . + 0 ID=cds-WP_000766674.1;Parent=gene-CCO35_RS19625;Dbxref=GenBank:WP_000766674.1;Name=WP_000766674.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=CCO35_RS19625;product=glutathione S-transferase;protein_id=WP_000766674.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 131544 132935 . + . ID=gene-CCO35_RS19630;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=CCO35_RS19630;old_locus_tag=CCO35_19620 NZ_NPME01000006.1 Protein Homology CDS 131544 132935 . + 0 ID=cds-WP_023229751.1;Parent=gene-CCO35_RS19630;Dbxref=GenBank:WP_023229751.1;Name=WP_023229751.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=CCO35_RS19630;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_023229751.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 132932 134782 . + . ID=gene-CCO35_RS19635;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=CCO35_RS19635;old_locus_tag=CCO35_19625 NZ_NPME01000006.1 Protein Homology CDS 132932 134782 . + 0 ID=cds-WP_000582383.1;Parent=gene-CCO35_RS19635;Dbxref=GenBank:WP_000582383.1;Name=WP_000582383.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=CCO35_RS19635;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582383.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 134968 136119 . + . ID=gene-CCO35_RS19640;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=CCO35_RS19640;old_locus_tag=CCO35_19630 NZ_NPME01000006.1 Protein Homology CDS 134968 136119 . + 0 ID=cds-WP_000741491.1;Parent=gene-CCO35_RS19640;Dbxref=GenBank:WP_000741491.1;Name=WP_000741491.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026233.1;locus_tag=CCO35_RS19640;product=L-threonine dehydrogenase;protein_id=WP_000741491.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 136191 137072 . - . ID=gene-CCO35_RS19645;Name=CCO35_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19645;old_locus_tag=CCO35_19635 NZ_NPME01000006.1 Protein Homology CDS 136191 137072 . - 0 ID=cds-WP_001188271.1;Parent=gene-CCO35_RS19645;Dbxref=GenBank:WP_001188271.1;Name=WP_001188271.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=CCO35_RS19645;product=ROK family protein;protein_id=WP_001188271.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 137241 138779 . + . ID=gene-CCO35_RS19650;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=CCO35_RS19650;old_locus_tag=CCO35_19640 NZ_NPME01000006.1 Protein Homology CDS 137241 138779 . + 0 ID=cds-WP_000183988.1;Parent=gene-CCO35_RS19650;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=CCO35_RS19650;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 139009 140964 . - . ID=gene-CCO35_RS19655;Name=CCO35_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19655;old_locus_tag=CCO35_19645 NZ_NPME01000006.1 Protein Homology CDS 139009 140964 . - 0 ID=cds-WP_001101497.1;Parent=gene-CCO35_RS19655;Dbxref=GenBank:WP_001101497.1;Name=WP_001101497.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=CCO35_RS19655;product=glycoside hydrolase family 127 protein;protein_id=WP_001101497.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 141228 142043 . + . ID=gene-CCO35_RS19660;Name=CCO35_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19660;old_locus_tag=CCO35_19650 NZ_NPME01000006.1 Protein Homology CDS 141228 142043 . + 0 ID=cds-WP_000891808.1;Parent=gene-CCO35_RS19660;Dbxref=GenBank:WP_000891808.1;Name=WP_000891808.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=CCO35_RS19660;product=AraC family transcriptional regulator;protein_id=WP_000891808.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 142192 142887 . - . ID=gene-CCO35_RS19665;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO35_RS19665;old_locus_tag=CCO35_19655 NZ_NPME01000006.1 Protein Homology CDS 142192 142887 . - 0 ID=cds-WP_023137414.1;Parent=gene-CCO35_RS19665;Dbxref=GenBank:WP_023137414.1;Name=WP_023137414.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=CCO35_RS19665;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_023137414.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 142881 143741 . - . ID=gene-CCO35_RS19670;Name=CCO35_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19670;old_locus_tag=CCO35_19660 NZ_NPME01000006.1 Protein Homology CDS 142881 143741 . - 0 ID=cds-WP_001244036.1;Parent=gene-CCO35_RS19670;Dbxref=GenBank:WP_001244036.1;Name=WP_001244036.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=CCO35_RS19670;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001244036.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 143746 144396 . - . ID=gene-CCO35_RS19675;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO35_RS19675;old_locus_tag=CCO35_19665 NZ_NPME01000006.1 Protein Homology CDS 143746 144396 . - 0 ID=cds-WP_000089520.1;Parent=gene-CCO35_RS19675;Dbxref=GenBank:WP_000089520.1;Name=WP_000089520.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089526.1;locus_tag=CCO35_RS19675;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089520.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 144393 145889 . - . ID=gene-CCO35_RS19680;Name=CCO35_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19680;old_locus_tag=CCO35_19670 NZ_NPME01000006.1 Protein Homology CDS 144393 145889 . - 0 ID=cds-WP_000074063.1;Parent=gene-CCO35_RS19680;Dbxref=GenBank:WP_000074063.1;Name=WP_000074063.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=CCO35_RS19680;product=FGGY-family carbohydrate kinase;protein_id=WP_000074063.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 145893 146879 . - . ID=gene-CCO35_RS19685;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=CCO35_RS19685;old_locus_tag=CCO35_19675 NZ_NPME01000006.1 Protein Homology CDS 145893 146879 . - 0 ID=cds-WP_000766331.1;Parent=gene-CCO35_RS19685;Dbxref=GenBank:WP_000766331.1;Name=WP_000766331.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=CCO35_RS19685;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766331.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 146891 148168 . - . ID=gene-CCO35_RS19690;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=CCO35_RS19690;old_locus_tag=CCO35_19680 NZ_NPME01000006.1 Protein Homology CDS 146891 148168 . - 0 ID=cds-WP_000301820.1;Parent=gene-CCO35_RS19690;Dbxref=GenBank:WP_000301820.1;Name=WP_000301820.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=CCO35_RS19690;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301820.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 148171 148644 . - . ID=gene-CCO35_RS19695;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=CCO35_RS19695;old_locus_tag=CCO35_19685 NZ_NPME01000006.1 Protein Homology CDS 148171 148644 . - 0 ID=cds-WP_000832313.1;Parent=gene-CCO35_RS19695;Dbxref=GenBank:WP_000832313.1;Name=WP_000832313.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=CCO35_RS19695;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832313.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 148783 149715 . - . ID=gene-CCO35_RS19700;Name=CCO35_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19700;old_locus_tag=CCO35_19690 NZ_NPME01000006.1 Protein Homology CDS 148783 149715 . - 0 ID=cds-WP_000794994.1;Parent=gene-CCO35_RS19700;Dbxref=GenBank:WP_000794994.1;Name=WP_000794994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528247.1;locus_tag=CCO35_RS19700;product=DUF4862 family protein;protein_id=WP_000794994.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 149739 150203 . - . ID=gene-CCO35_RS19705;Name=CCO35_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19705;old_locus_tag=CCO35_19695 NZ_NPME01000006.1 Protein Homology CDS 149739 150203 . - 0 ID=cds-WP_000576101.1;Parent=gene-CCO35_RS19705;Dbxref=GenBank:WP_000576101.1;Name=WP_000576101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=CCO35_RS19705;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576101.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 150215 151213 . - . ID=gene-CCO35_RS19710;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=CCO35_RS19710;old_locus_tag=CCO35_19700 NZ_NPME01000006.1 Protein Homology CDS 150215 151213 . - 0 ID=cds-WP_000869005.1;Parent=gene-CCO35_RS19710;Dbxref=GenBank:WP_000869005.1;Name=WP_000869005.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=CCO35_RS19710;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869005.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 151443 152243 . + . ID=gene-CCO35_RS19715;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=CCO35_RS19715;old_locus_tag=CCO35_19705 NZ_NPME01000006.1 Protein Homology CDS 151443 152243 . + 0 ID=cds-WP_000081340.1;Parent=gene-CCO35_RS19715;Dbxref=GenBank:WP_000081340.1;Name=WP_000081340.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=CCO35_RS19715;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081340.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 152360 152833 . + . ID=gene-CCO35_RS19720;Name=CCO35_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19720;old_locus_tag=CCO35_19710 NZ_NPME01000006.1 Protein Homology CDS 152360 152833 . + 0 ID=cds-WP_001078819.1;Parent=gene-CCO35_RS19720;Dbxref=GenBank:WP_001078819.1;Name=WP_001078819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=CCO35_RS19720;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078819.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 152870 154120 . - . ID=gene-CCO35_RS19725;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=CCO35_RS19725;old_locus_tag=CCO35_19715 NZ_NPME01000006.1 Protein Homology CDS 152870 154120 . - 0 ID=cds-WP_000144384.1;Parent=gene-CCO35_RS19725;Dbxref=GenBank:WP_000144384.1;Name=WP_000144384.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=CCO35_RS19725;product=valine--pyruvate transaminase;protein_id=WP_000144384.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 154294 156321 . - . ID=gene-CCO35_RS19730;Name=CCO35_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19730;old_locus_tag=CCO35_19720 NZ_NPME01000006.1 Protein Homology CDS 154294 156321 . - 0 ID=cds-WP_000761316.1;Parent=gene-CCO35_RS19730;Dbxref=GenBank:WP_000761316.1;Name=WP_000761316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=CCO35_RS19730;product=alpha-amylase;protein_id=WP_000761316.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 156637 157461 . + . ID=gene-CCO35_RS19735;Name=CCO35_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19735;old_locus_tag=CCO35_19725 NZ_NPME01000006.1 Protein Homology CDS 156637 157461 . + 0 ID=cds-WP_001562170.1;Parent=gene-CCO35_RS19735;Dbxref=GenBank:WP_001562170.1;Name=WP_001562170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=CCO35_RS19735;product=protein bax;protein_id=WP_001562170.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 157522 158700 . - . ID=gene-CCO35_RS19740;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=CCO35_RS19740;old_locus_tag=CCO35_19730 NZ_NPME01000006.1 Protein Homology CDS 157522 158700 . - 0 ID=cds-WP_000459824.1;Parent=gene-CCO35_RS19740;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=CCO35_RS19740;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 159063 160385 . + . ID=gene-CCO35_RS19750;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=CCO35_RS19750;old_locus_tag=CCO35_19740 NZ_NPME01000006.1 Protein Homology CDS 159063 160385 . + 0 ID=cds-WP_001149561.1;Parent=gene-CCO35_RS19750;Dbxref=GenBank:WP_001149561.1;Name=WP_001149561.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=CCO35_RS19750;product=xylose isomerase;protein_id=WP_001149561.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 160485 161939 . + . ID=gene-CCO35_RS19755;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=CCO35_RS19755;old_locus_tag=CCO35_19745 NZ_NPME01000006.1 Protein Homology CDS 160485 161939 . + 0 ID=cds-WP_000275311.1;Parent=gene-CCO35_RS19755;Dbxref=GenBank:WP_000275311.1;Name=WP_000275311.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=CCO35_RS19755;product=xylulokinase;protein_id=WP_000275311.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 162114 162467 . + . ID=gene-CCO35_RS19760;Name=CCO35_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19760;old_locus_tag=CCO35_19750 NZ_NPME01000006.1 Protein Homology CDS 162114 162467 . + 0 ID=cds-WP_000340932.1;Parent=gene-CCO35_RS19760;Dbxref=GenBank:WP_000340932.1;Name=WP_000340932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=CCO35_RS19760;product=YiaA/YiaB family protein;protein_id=WP_000340932.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 162490 163485 . - . ID=gene-CCO35_RS19765;Name=CCO35_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19765;old_locus_tag=CCO35_19755 NZ_NPME01000006.1 Protein Homology CDS 162490 163485 . - 0 ID=cds-WP_001182575.1;Parent=gene-CCO35_RS19765;Dbxref=GenBank:WP_001182575.1;Name=WP_001182575.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=CCO35_RS19765;product=acyltransferase;protein_id=WP_001182575.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 163651 163953 . + . ID=gene-CCO35_RS19775;Name=CCO35_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19775;old_locus_tag=CCO35_19765 NZ_NPME01000006.1 Protein Homology CDS 163651 163953 . + 0 ID=cds-WP_000605592.1;Parent=gene-CCO35_RS19775;Dbxref=GenBank:WP_000605592.1;Name=WP_000605592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=CCO35_RS19775;product=YsaB family lipoprotein;protein_id=WP_000605592.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 164092 165003 . + . ID=gene-CCO35_RS19780;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=CCO35_RS19780;old_locus_tag=CCO35_19770 NZ_NPME01000006.1 Protein Homology CDS 164092 165003 . + 0 ID=cds-WP_001168556.1;Parent=gene-CCO35_RS19780;Dbxref=GenBank:WP_001168556.1;Name=WP_001168556.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=CCO35_RS19780;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168556.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 165013 167082 . + . ID=gene-CCO35_RS19785;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=CCO35_RS19785;old_locus_tag=CCO35_19775 NZ_NPME01000006.1 Protein Homology CDS 165013 167082 . + 0 ID=cds-WP_001291743.1;Parent=gene-CCO35_RS19785;Dbxref=GenBank:WP_001291743.1;Name=WP_001291743.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=CCO35_RS19785;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291743.1;transl_table=11 NZ_NPME01000006.1 RefSeq pseudogene 167471 167899 . + . ID=gene-CCO35_RS24150;Name=CCO35_RS24150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24150;partial=true;pseudo=true;start_range=.,167471 NZ_NPME01000006.1 Protein Homology CDS 167471 167899 . + 0 ID=cds-CCO35_RS24150;Parent=gene-CCO35_RS24150;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=CCO35_RS24150;partial=true;product=transposase;pseudo=true;start_range=.,167471;transl_table=11 NZ_NPME01000006.1 RefSeq gene 168264 169169 . + . ID=gene-CCO35_RS19795;Name=CCO35_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19795;old_locus_tag=CCO35_19785 NZ_NPME01000006.1 Protein Homology CDS 168264 169169 . + 0 ID=cds-WP_031567314.1;Parent=gene-CCO35_RS19795;Dbxref=GenBank:WP_031567314.1;Name=WP_031567314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952518.1;locus_tag=CCO35_RS19795;product=hypothetical protein;protein_id=WP_031567314.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 169515 169802 . + . ID=gene-CCO35_RS19800;Name=CCO35_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19800;old_locus_tag=CCO35_19790 NZ_NPME01000006.1 Protein Homology CDS 169515 169802 . + 0 ID=cds-WP_000965889.1;Parent=gene-CCO35_RS19800;Dbxref=GenBank:WP_000965889.1;Name=WP_000965889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=CCO35_RS19800;product=DUF1778 domain-containing protein;protein_id=WP_000965889.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 169790 170275 . + . ID=gene-CCO35_RS19805;Name=CCO35_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19805;old_locus_tag=CCO35_19795 NZ_NPME01000006.1 Protein Homology CDS 169790 170275 . + 0 ID=cds-WP_000533909.1;Parent=gene-CCO35_RS19805;Dbxref=GenBank:WP_000533909.1;Name=WP_000533909.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=CCO35_RS19805;product=GNAT family N-acetyltransferase;protein_id=WP_000533909.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 170647 171186 . - . ID=gene-CCO35_RS19810;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=CCO35_RS19810;old_locus_tag=CCO35_19800 NZ_NPME01000006.1 Protein Homology CDS 170647 171186 . - 0 ID=cds-WP_000047140.1;Parent=gene-CCO35_RS19810;Dbxref=GenBank:WP_000047140.1;Name=WP_000047140.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=CCO35_RS19810;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_000047140.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 171358 171570 . - . ID=gene-CCO35_RS19815;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO35_RS19815;old_locus_tag=CCO35_19805 NZ_NPME01000006.1 Protein Homology CDS 171358 171570 . - 0 ID=cds-WP_000014594.1;Parent=gene-CCO35_RS19815;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=CCO35_RS19815;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 171858 172148 . - . ID=gene-CCO35_RS19820;Name=CCO35_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19820;old_locus_tag=CCO35_19810 NZ_NPME01000006.1 Protein Homology CDS 171858 172148 . - 0 ID=cds-WP_000455790.1;Parent=gene-CCO35_RS19820;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=CCO35_RS19820;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 172587 173297 . + . ID=gene-CCO35_RS19825;Name=CCO35_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19825;old_locus_tag=CCO35_19815 NZ_NPME01000006.1 Protein Homology CDS 172587 173297 . + 0 ID=cds-WP_000190524.1;Parent=gene-CCO35_RS19825;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=CCO35_RS19825;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 173347 174321 . - . ID=gene-CCO35_RS19830;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=CCO35_RS19830;old_locus_tag=CCO35_19820 NZ_NPME01000006.1 Protein Homology CDS 173347 174321 . - 0 ID=cds-WP_000804678.1;Parent=gene-CCO35_RS19830;Dbxref=GenBank:WP_000804678.1;Name=WP_000804678.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=CCO35_RS19830;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000804678.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 174551 175213 . - . ID=gene-CCO35_RS19835;Name=CCO35_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19835;old_locus_tag=CCO35_19825 NZ_NPME01000006.1 Protein Homology CDS 174551 175213 . - 0 ID=cds-WP_000747548.1;Parent=gene-CCO35_RS19835;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=CCO35_RS19835;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 175366 177699 . + . ID=gene-CCO35_RS19840;Name=CCO35_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19840;old_locus_tag=CCO35_19830 NZ_NPME01000006.1 Protein Homology CDS 175366 177699 . + 0 ID=cds-WP_000148461.1;Parent=gene-CCO35_RS19840;Dbxref=GenBank:WP_000148461.1;Name=WP_000148461.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=CCO35_RS19840;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_000148461.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 177668 178108 . - . ID=gene-CCO35_RS19845;Name=CCO35_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19845;old_locus_tag=CCO35_19835 NZ_NPME01000006.1 Protein Homology CDS 177668 178108 . - 0 ID=cds-WP_000619902.1;Parent=gene-CCO35_RS19845;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=CCO35_RS19845;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 178086 178667 . - . ID=gene-CCO35_RS19850;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=CCO35_RS19850;old_locus_tag=CCO35_19840 NZ_NPME01000006.1 Protein Homology CDS 178086 178667 . - 0 ID=cds-WP_001188424.1;Parent=gene-CCO35_RS19850;Dbxref=GenBank:WP_001188424.1;Name=WP_001188424.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=CCO35_RS19850;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188424.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 178824 179528 . + . ID=gene-CCO35_RS19855;Name=CCO35_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19855;old_locus_tag=CCO35_19845 NZ_NPME01000006.1 Protein Homology CDS 178824 179528 . + 0 ID=cds-WP_000637073.1;Parent=gene-CCO35_RS19855;Dbxref=GenBank:WP_000637073.1;Name=WP_000637073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=CCO35_RS19855;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637073.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 179759 181450 . + . ID=gene-CCO35_RS19860;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=CCO35_RS19860;old_locus_tag=CCO35_19850 NZ_NPME01000006.1 Protein Homology CDS 179759 181450 . + 0 ID=cds-WP_001269248.1;Parent=gene-CCO35_RS19860;Dbxref=GenBank:WP_001269248.1;Name=WP_001269248.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=CCO35_RS19860;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269248.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 181541 181617 . + . ID=gene-CCO35_RS19865;Name=CCO35_RS19865;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS19865;old_locus_tag=CCO35_19855 NZ_NPME01000006.1 tRNAscan-SE tRNA 181541 181617 . + . ID=rna-CCO35_RS19865;Parent=gene-CCO35_RS19865;anticodon=(pos:181575..181577);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS19865;product=tRNA-Pro NZ_NPME01000006.1 tRNAscan-SE exon 181541 181617 . + . ID=exon-CCO35_RS19865-1;Parent=rna-CCO35_RS19865;anticodon=(pos:181575..181577);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS19865;product=tRNA-Pro NZ_NPME01000006.1 RefSeq gene 181652 181785 . + . ID=gene-CCO35_RS19870;Name=CCO35_RS19870;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO35_RS19870;old_locus_tag=CCO35_19860 NZ_NPME01000006.1 cmsearch ncRNA 181652 181785 . + . ID=rna-CCO35_RS19870;Parent=gene-CCO35_RS19870;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS19870;product=RtT sRNA NZ_NPME01000006.1 cmsearch exon 181652 181785 . + . ID=exon-CCO35_RS19870-1;Parent=rna-CCO35_RS19870;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS19870;product=RtT sRNA NZ_NPME01000006.1 RefSeq gene 181821 181954 . + . ID=gene-CCO35_RS19875;Name=CCO35_RS19875;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO35_RS19875;old_locus_tag=CCO35_19865 NZ_NPME01000006.1 cmsearch ncRNA 181821 181954 . + . ID=rna-CCO35_RS19875;Parent=gene-CCO35_RS19875;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS19875;product=RtT sRNA NZ_NPME01000006.1 cmsearch exon 181821 181954 . + . ID=exon-CCO35_RS19875-1;Parent=rna-CCO35_RS19875;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS19875;product=RtT sRNA NZ_NPME01000006.1 RefSeq gene 181945 182952 . - . ID=gene-CCO35_RS19880;Name=CCO35_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19880;old_locus_tag=CCO35_19870 NZ_NPME01000006.1 Protein Homology CDS 181945 182952 . - 0 ID=cds-WP_031567337.1;Parent=gene-CCO35_RS19880;Dbxref=GenBank:WP_031567337.1;Name=WP_031567337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=CCO35_RS19880;product=substrate-binding domain-containing protein;protein_id=WP_031567337.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 183102 184226 . + . ID=gene-CCO35_RS19885;Name=CCO35_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19885;old_locus_tag=CCO35_19875 NZ_NPME01000006.1 Protein Homology CDS 183102 184226 . + 0 ID=cds-WP_031567339.1;Parent=gene-CCO35_RS19885;Dbxref=GenBank:WP_031567339.1;Name=WP_031567339.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=CCO35_RS19885;product=aryl-sulfate sulfotransferase;protein_id=WP_031567339.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 184284 185609 . + . ID=gene-CCO35_RS19890;Name=CCO35_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19890;old_locus_tag=CCO35_19880 NZ_NPME01000006.1 Protein Homology CDS 184284 185609 . + 0 ID=cds-WP_001136076.1;Parent=gene-CCO35_RS19890;Dbxref=GenBank:WP_001136076.1;Name=WP_001136076.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=CCO35_RS19890;product=uracil-xanthine permease family protein;protein_id=WP_001136076.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 186168 187775 . + . ID=gene-CCO35_RS19895;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=CCO35_RS19895;old_locus_tag=CCO35_19885 NZ_NPME01000006.1 Protein Homology CDS 186168 187775 . + 0 ID=cds-WP_000028047.1;Parent=gene-CCO35_RS19895;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=CCO35_RS19895;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 187932 188951 . + . ID=gene-CCO35_RS19900;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=CCO35_RS19900;old_locus_tag=CCO35_19890 NZ_NPME01000006.1 Protein Homology CDS 187932 188951 . + 0 ID=cds-WP_000938843.1;Parent=gene-CCO35_RS19900;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=CCO35_RS19900;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 188961 189863 . + . ID=gene-CCO35_RS19905;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=CCO35_RS19905;old_locus_tag=CCO35_19895 NZ_NPME01000006.1 Protein Homology CDS 188961 189863 . + 0 ID=cds-WP_000084690.1;Parent=gene-CCO35_RS19905;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=CCO35_RS19905;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 189874 190857 . + . ID=gene-CCO35_RS19910;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=CCO35_RS19910;old_locus_tag=CCO35_19900 NZ_NPME01000006.1 Protein Homology CDS 189874 190857 . + 0 ID=cds-WP_001196509.1;Parent=gene-CCO35_RS19910;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=CCO35_RS19910;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 190854 191867 . + . ID=gene-CCO35_RS19915;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=CCO35_RS19915;old_locus_tag=CCO35_19905 NZ_NPME01000006.1 Protein Homology CDS 190854 191867 . + 0 ID=cds-WP_000103561.1;Parent=gene-CCO35_RS19915;Dbxref=GenBank:WP_000103561.1;Name=WP_000103561.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=CCO35_RS19915;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000103561.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 191968 193266 . - . ID=gene-CCO35_RS19920;Name=CCO35_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19920;old_locus_tag=CCO35_19910 NZ_NPME01000006.1 Protein Homology CDS 191968 193266 . - 0 ID=cds-WP_001150175.1;Parent=gene-CCO35_RS19920;Dbxref=GenBank:WP_001150175.1;Name=WP_001150175.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=CCO35_RS19920;product=aromatic amino acid transport family protein;protein_id=WP_001150175.1;transl_table=11 NZ_NPME01000006.1 RefSeq pseudogene 193384 193536 . - . ID=gene-CCO35_RS24155;Name=CCO35_RS24155;end_range=193536,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS24155;old_locus_tag=CCO35_19915;partial=true;pseudo=true NZ_NPME01000006.1 Protein Homology CDS 193384 193536 . - 0 ID=cds-CCO35_RS24155;Parent=gene-CCO35_RS24155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;end_range=193536,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.6;locus_tag=CCO35_RS24155;partial=true;product=PLP-dependent transferase;pseudo=true;transl_table=11 NZ_NPME01000006.1 RefSeq gene 193909 194016 . + . ID=gene-CCO35_RS19935;Name=CCO35_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS19935;old_locus_tag=CCO35_19925 NZ_NPME01000006.1 Protein Homology CDS 193909 194016 . + 0 ID=cds-WP_001537650.1;Parent=gene-CCO35_RS19935;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=CCO35_RS19935;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 194098 195777 . - . ID=gene-CCO35_RS19940;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=CCO35_RS19940;old_locus_tag=CCO35_19930 NZ_NPME01000006.1 Protein Homology CDS 194098 195777 . - 0 ID=cds-WP_094965376.1;Parent=gene-CCO35_RS19940;Dbxref=GenBank:WP_094965376.1;Name=WP_094965376.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=CCO35_RS19940;product=cellulose biosynthesis protein BcsG;protein_id=WP_094965376.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 195774 195965 . - . ID=gene-CCO35_RS19945;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=CCO35_RS19945;old_locus_tag=CCO35_19935 NZ_NPME01000006.1 Protein Homology CDS 195774 195965 . - 0 ID=cds-WP_000988321.1;Parent=gene-CCO35_RS19945;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=CCO35_RS19945;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 195962 197533 . - . ID=gene-CCO35_RS19950;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=CCO35_RS19950;old_locus_tag=CCO35_19940 NZ_NPME01000006.1 Protein Homology CDS 195962 197533 . - 0 ID=cds-WP_001205759.1;Parent=gene-CCO35_RS19950;Dbxref=GenBank:WP_001205759.1;Name=WP_001205759.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=CCO35_RS19950;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001205759.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 197778 197981 . + . ID=gene-CCO35_RS19955;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=CCO35_RS19955;old_locus_tag=CCO35_19945 NZ_NPME01000006.1 Protein Homology CDS 197778 197981 . + 0 ID=cds-WP_000282616.1;Parent=gene-CCO35_RS19955;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=CCO35_RS19955;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 197982 198734 . + . ID=gene-CCO35_RS19960;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=CCO35_RS19960;old_locus_tag=CCO35_19950 NZ_NPME01000006.1 Protein Homology CDS 197982 198734 . + 0 ID=cds-WP_000996123.1;Parent=gene-CCO35_RS19960;Dbxref=GenBank:WP_000996123.1;Name=WP_000996123.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=CCO35_RS19960;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996123.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 198731 201355 . + . ID=gene-CCO35_RS19965;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=CCO35_RS19965;old_locus_tag=CCO35_19955 NZ_NPME01000006.1 Protein Homology CDS 198731 201355 . + 0 ID=cds-WP_001275342.1;Parent=gene-CCO35_RS19965;Dbxref=GenBank:WP_001275342.1;Name=WP_001275342.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=CCO35_RS19965;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_001275342.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 201366 203666 . + . ID=gene-CCO35_RS19970;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=CCO35_RS19970;old_locus_tag=CCO35_19960 NZ_NPME01000006.1 Protein Homology CDS 201366 203666 . + 0 ID=cds-WP_000823821.1;Parent=gene-CCO35_RS19970;Dbxref=GenBank:WP_000823821.1;Name=WP_000823821.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=CCO35_RS19970;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823821.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 203670 204779 . + . ID=gene-CCO35_RS19975;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=CCO35_RS19975;old_locus_tag=CCO35_19965 NZ_NPME01000006.1 Protein Homology CDS 203670 204779 . + 0 ID=cds-WP_000988811.1;Parent=gene-CCO35_RS19975;Dbxref=GenBank:WP_000988811.1;Name=WP_000988811.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=CCO35_RS19975;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_000988811.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 204761 208303 . + . ID=gene-CCO35_RS19980;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=CCO35_RS19980;old_locus_tag=CCO35_19970 NZ_NPME01000006.1 Protein Homology CDS 204761 208303 . + 0 ID=cds-WP_031567364.1;Parent=gene-CCO35_RS19980;Dbxref=GenBank:WP_031567364.1;Name=WP_031567364.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=CCO35_RS19980;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_031567364.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 208477 210483 . + . ID=gene-CCO35_RS19990;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=CCO35_RS19990;old_locus_tag=CCO35_19980 NZ_NPME01000006.1 Protein Homology CDS 208477 210483 . + 0 ID=cds-WP_001266362.1;Parent=gene-CCO35_RS19990;Dbxref=GenBank:WP_001266362.1;Name=WP_001266362.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=CCO35_RS19990;product=biofilm formation regulator HmsP;protein_id=WP_001266362.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 210641 211927 . + . ID=gene-CCO35_RS19995;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=CCO35_RS19995;old_locus_tag=CCO35_19985 NZ_NPME01000006.1 Protein Homology CDS 210641 211927 . + 0 ID=cds-WP_000858228.1;Parent=gene-CCO35_RS19995;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=CCO35_RS19995;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 212147 213634 . + . ID=gene-CCO35_RS20000;Name=CCO35_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20000;old_locus_tag=CCO35_19990 NZ_NPME01000006.1 Protein Homology CDS 212147 213634 . + 0 ID=cds-WP_001163183.1;Parent=gene-CCO35_RS20000;Dbxref=GenBank:WP_001163183.1;Name=WP_001163183.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=CCO35_RS20000;product=M16 family metallopeptidase;protein_id=WP_001163183.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 213688 214617 . - . ID=gene-CCO35_RS20005;Name=CCO35_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20005;old_locus_tag=CCO35_19995 NZ_NPME01000006.1 Protein Homology CDS 213688 214617 . - 0 ID=cds-WP_000037591.1;Parent=gene-CCO35_RS20005;Dbxref=GenBank:WP_000037591.1;Name=WP_000037591.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=CCO35_RS20005;product=sugar kinase;protein_id=WP_000037591.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 214846 215613 . + . ID=gene-CCO35_RS20010;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=CCO35_RS20010;old_locus_tag=CCO35_20000 NZ_NPME01000006.1 Protein Homology CDS 214846 215613 . + 0 ID=cds-WP_000595623.1;Parent=gene-CCO35_RS20010;Dbxref=GenBank:WP_000595623.1;Name=WP_000595623.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=CCO35_RS20010;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595623.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 215723 217783 . + . ID=gene-CCO35_RS20015;Name=CCO35_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20015;old_locus_tag=CCO35_20005 NZ_NPME01000006.1 Protein Homology CDS 215723 217783 . + 0 ID=cds-WP_000158670.1;Parent=gene-CCO35_RS20015;Dbxref=GenBank:WP_000158670.1;Name=WP_000158670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=CCO35_RS20015;product=AsmA family protein;protein_id=WP_000158670.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 217823 219145 . - . ID=gene-CCO35_RS20020;Name=CCO35_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20020;old_locus_tag=CCO35_20010 NZ_NPME01000006.1 Protein Homology CDS 217823 219145 . - 0 ID=cds-WP_001148981.1;Parent=gene-CCO35_RS20020;Dbxref=GenBank:WP_001148981.1;Name=WP_001148981.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=CCO35_RS20020;product=MFS transporter;protein_id=WP_001148981.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 219496 220524 . - . ID=gene-CCO35_RS20025;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=CCO35_RS20025;old_locus_tag=CCO35_20015 NZ_NPME01000006.1 Protein Homology CDS 219496 220524 . - 0 ID=cds-WP_000191230.1;Parent=gene-CCO35_RS20025;Dbxref=GenBank:WP_000191230.1;Name=WP_000191230.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=CCO35_RS20025;product=inner membrane protein YhjD;protein_id=WP_000191230.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 220597 221496 . - . ID=gene-CCO35_RS20030;Name=CCO35_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20030;old_locus_tag=CCO35_20020 NZ_NPME01000006.1 Protein Homology CDS 220597 221496 . - 0 ID=cds-WP_001556251.1;Parent=gene-CCO35_RS20030;Dbxref=GenBank:WP_001556251.1;Name=WP_001556251.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=CCO35_RS20030;product=LysR family transcriptional regulator;protein_id=WP_001556251.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 222128 222730 . + . ID=gene-CCO35_RS20040;Name=CCO35_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20040;old_locus_tag=CCO35_20030 NZ_NPME01000006.1 Protein Homology CDS 222128 222730 . + 0 ID=cds-WP_001196081.1;Parent=gene-CCO35_RS20040;Dbxref=GenBank:WP_001196081.1;Name=WP_001196081.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=CCO35_RS20040;product=response regulator transcription factor;protein_id=WP_001196081.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 222736 223092 . - . ID=gene-CCO35_RS20045;Name=CCO35_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20045;old_locus_tag=CCO35_20035 NZ_NPME01000006.1 Protein Homology CDS 222736 223092 . - 0 ID=cds-WP_001120252.1;Parent=gene-CCO35_RS20045;Dbxref=GenBank:WP_001120252.1;Name=WP_001120252.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=CCO35_RS20045;product=glycoside hydrolase family protein;protein_id=WP_001120252.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 223373 224962 . + . ID=gene-CCO35_RS20050;Name=CCO35_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20050;old_locus_tag=CCO35_20040 NZ_NPME01000006.1 Protein Homology CDS 223373 224962 . + 0 ID=cds-WP_000185004.1;Parent=gene-CCO35_RS20050;Dbxref=GenBank:WP_000185004.1;Name=WP_000185004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=CCO35_RS20050;product=STY4199 family HEPN domain-containing protein;protein_id=WP_000185004.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 224975 226624 . - . ID=gene-CCO35_RS20055;Name=CCO35_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20055;old_locus_tag=CCO35_20045 NZ_NPME01000006.1 Protein Homology CDS 224975 226624 . - 0 ID=cds-WP_000934254.1;Parent=gene-CCO35_RS20055;Dbxref=GenBank:WP_000934254.1;Name=WP_000934254.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=CCO35_RS20055;product=alpha%2Calpha-trehalase;protein_id=WP_000934254.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 226950 227669 . + . ID=gene-CCO35_RS20060;Name=CCO35_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20060;old_locus_tag=CCO35_20050 NZ_NPME01000006.1 Protein Homology CDS 226950 227669 . + 0 ID=cds-WP_000572566.1;Parent=gene-CCO35_RS20060;Dbxref=GenBank:WP_000572566.1;Name=WP_000572566.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=CCO35_RS20060;product=GntR family transcriptional regulator;protein_id=WP_000572566.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 227845 228822 . + . ID=gene-CCO35_RS20065;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=CCO35_RS20065;old_locus_tag=CCO35_20055 NZ_NPME01000006.1 Protein Homology CDS 227845 228822 . + 0 ID=cds-WP_077916009.1;Parent=gene-CCO35_RS20065;Dbxref=GenBank:WP_077916009.1;Name=WP_077916009.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=CCO35_RS20065;product=6-phosphofructose-aspartate deglycase;protein_id=WP_077916009.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 228886 229731 . + . ID=gene-CCO35_RS20070;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=CCO35_RS20070;old_locus_tag=CCO35_20060 NZ_NPME01000006.1 Protein Homology CDS 228886 229731 . + 0 ID=cds-WP_000028427.1;Parent=gene-CCO35_RS20070;Dbxref=GenBank:WP_000028427.1;Name=WP_000028427.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=CCO35_RS20070;product=fructose-aspartate kinase;protein_id=WP_000028427.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 229785 231104 . + . ID=gene-CCO35_RS20075;Name=CCO35_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20075;old_locus_tag=CCO35_20065 NZ_NPME01000006.1 Protein Homology CDS 229785 231104 . + 0 ID=cds-WP_000498935.1;Parent=gene-CCO35_RS20075;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=CCO35_RS20075;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 231163 232206 . + . ID=gene-CCO35_RS20080;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=CCO35_RS20080;old_locus_tag=CCO35_20070 NZ_NPME01000006.1 Protein Homology CDS 231163 232206 . + 0 ID=cds-WP_000702755.1;Parent=gene-CCO35_RS20080;Dbxref=GenBank:WP_000702755.1;Name=WP_000702755.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=CCO35_RS20080;product=fructose-asparagine asparaginase;protein_id=WP_000702755.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 232253 233605 . - . ID=gene-CCO35_RS20085;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=CCO35_RS20085;old_locus_tag=CCO35_20075 NZ_NPME01000006.1 Protein Homology CDS 232253 233605 . - 0 ID=cds-WP_000160765.1;Parent=gene-CCO35_RS20085;Dbxref=GenBank:WP_000160765.1;Name=WP_000160765.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=CCO35_RS20085;product=glutathione-disulfide reductase;protein_id=WP_000160765.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 233710 234552 . - . ID=gene-CCO35_RS20090;Name=CCO35_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20090;old_locus_tag=CCO35_20080 NZ_NPME01000006.1 Protein Homology CDS 233710 234552 . - 0 ID=cds-WP_000954235.1;Parent=gene-CCO35_RS20090;Dbxref=GenBank:WP_000954235.1;Name=WP_000954235.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=CCO35_RS20090;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954235.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 234763 236034 . + . ID=gene-CCO35_RS20095;Name=CCO35_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20095;old_locus_tag=CCO35_20085 NZ_NPME01000006.1 Protein Homology CDS 234763 236034 . + 0 ID=cds-WP_000766150.1;Parent=gene-CCO35_RS20095;Dbxref=GenBank:WP_000766150.1;Name=WP_000766150.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=CCO35_RS20095;product=acid phosphatase;protein_id=WP_000766150.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 236216 238258 . + . ID=gene-CCO35_RS20100;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=CCO35_RS20100;old_locus_tag=CCO35_20090 NZ_NPME01000006.1 Protein Homology CDS 236216 238258 . + 0 ID=cds-WP_000184178.1;Parent=gene-CCO35_RS20100;Dbxref=GenBank:WP_000184178.1;Name=WP_000184178.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=CCO35_RS20100;product=oligopeptidase A;protein_id=WP_000184178.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 238265 239023 . + . ID=gene-CCO35_RS20105;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=CCO35_RS20105;old_locus_tag=CCO35_20095 NZ_NPME01000006.1 Protein Homology CDS 238265 239023 . + 0 ID=cds-WP_001165130.1;Parent=gene-CCO35_RS20105;Dbxref=GenBank:WP_001165130.1;Name=WP_001165130.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=CCO35_RS20105;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_001165130.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 239115 240587 . - . ID=gene-CCO35_RS20110;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=CCO35_RS20110;old_locus_tag=CCO35_20100 NZ_NPME01000006.1 Protein Homology CDS 239115 240587 . - 0 ID=cds-WP_001098274.1;Parent=gene-CCO35_RS20110;Dbxref=GenBank:WP_001098274.1;Name=WP_001098274.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=CCO35_RS20110;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098274.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 240912 241346 . - . ID=gene-CCO35_RS20115;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=CCO35_RS20115;old_locus_tag=CCO35_20105 NZ_NPME01000006.1 Protein Homology CDS 240912 241346 . - 0 ID=cds-WP_000323565.1;Parent=gene-CCO35_RS20115;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=CCO35_RS20115;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 241734 242069 . + . ID=gene-CCO35_RS20120;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=CCO35_RS20120;old_locus_tag=CCO35_20110 NZ_NPME01000006.1 Protein Homology CDS 241734 242069 . + 0 ID=cds-WP_000626193.1;Parent=gene-CCO35_RS20120;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=CCO35_RS20120;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 242210 243706 . - . ID=gene-CCO35_RS20125;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=CCO35_RS20125;old_locus_tag=CCO35_20115 NZ_NPME01000006.1 Protein Homology CDS 242210 243706 . - 0 ID=cds-WP_000902764.1;Parent=gene-CCO35_RS20125;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=CCO35_RS20125;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 243937 245133 . + . ID=gene-CCO35_RS20130;Name=CCO35_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20130;old_locus_tag=CCO35_20120 NZ_NPME01000006.1 Protein Homology CDS 243937 245133 . + 0 ID=cds-WP_000439244.1;Parent=gene-CCO35_RS20130;Dbxref=GenBank:WP_000439244.1;Name=WP_000439244.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=CCO35_RS20130;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439244.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 245439 246506 . + . ID=gene-CCO35_RS20135;Name=CCO35_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20135;old_locus_tag=CCO35_20125 NZ_NPME01000006.1 Protein Homology CDS 245439 246506 . + 0 ID=cds-WP_000359836.1;Parent=gene-CCO35_RS20135;Dbxref=GenBank:WP_000359836.1;Name=WP_000359836.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=CCO35_RS20135;product=HlyD family secretion protein;protein_id=WP_000359836.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 246503 249244 . + . ID=gene-CCO35_RS20140;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=CCO35_RS20140;old_locus_tag=CCO35_20130 NZ_NPME01000006.1 Protein Homology CDS 246503 249244 . + 0 ID=cds-WP_000987350.1;Parent=gene-CCO35_RS20140;Dbxref=GenBank:WP_000987350.1;Name=WP_000987350.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149156.1;locus_tag=CCO35_RS20140;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000987350.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 249244 250368 . + . ID=gene-CCO35_RS20145;Name=CCO35_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20145;old_locus_tag=CCO35_20135 NZ_NPME01000006.1 Protein Homology CDS 249244 250368 . + 0 ID=cds-WP_001214764.1;Parent=gene-CCO35_RS20145;Dbxref=GenBank:WP_001214764.1;Name=WP_001214764.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=CCO35_RS20145;product=ABC transporter permease;protein_id=WP_001214764.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 250471 250872 . - . ID=gene-CCO35_RS20150;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=CCO35_RS20150;old_locus_tag=CCO35_20140 NZ_NPME01000006.1 Protein Homology CDS 250471 250872 . - 0 ID=cds-WP_001190057.1;Parent=gene-CCO35_RS20150;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=CCO35_RS20150;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 250964 251542 . - . ID=gene-CCO35_RS20155;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=CCO35_RS20155;old_locus_tag=CCO35_20145 NZ_NPME01000006.1 Protein Homology CDS 250964 251542 . - 0 ID=cds-WP_000284366.1;Parent=gene-CCO35_RS20155;Dbxref=GenBank:WP_000284366.1;Name=WP_000284366.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=CCO35_RS20155;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000284366.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 251594 252643 . - . ID=gene-CCO35_RS20160;Name=CCO35_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20160;old_locus_tag=CCO35_20150 NZ_NPME01000006.1 Protein Homology CDS 251594 252643 . - 0 ID=cds-WP_000179588.1;Parent=gene-CCO35_RS20160;Dbxref=GenBank:WP_000179588.1;Name=WP_000179588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=CCO35_RS20160;product=AI-2E family transporter;protein_id=WP_000179588.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 252733 253992 . + . ID=gene-CCO35_RS20165;Name=CCO35_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20165;old_locus_tag=CCO35_20155 NZ_NPME01000006.1 Protein Homology CDS 252733 253992 . + 0 ID=cds-WP_077906276.1;Parent=gene-CCO35_RS20165;Dbxref=GenBank:WP_077906276.1;Name=WP_077906276.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=CCO35_RS20165;product=MFS transporter;protein_id=WP_077906276.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 253996 254553 . - . ID=gene-CCO35_RS20170;Name=CCO35_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20170;old_locus_tag=CCO35_20160 NZ_NPME01000006.1 Protein Homology CDS 253996 254553 . - 0 ID=cds-WP_001245277.1;Parent=gene-CCO35_RS20170;Dbxref=GenBank:WP_001245277.1;Name=WP_001245277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=CCO35_RS20170;product=DcrB family lipoprotein;protein_id=WP_001245277.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 254626 255291 . - . ID=gene-CCO35_RS20175;Name=CCO35_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20175;old_locus_tag=CCO35_20165 NZ_NPME01000006.1 Protein Homology CDS 254626 255291 . - 0 ID=cds-WP_001531644.1;Parent=gene-CCO35_RS20175;Dbxref=GenBank:WP_001531644.1;Name=WP_001531644.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=CCO35_RS20175;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001531644.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 255461 255706 . + . ID=gene-CCO35_RS20180;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=CCO35_RS20180;old_locus_tag=CCO35_20170 NZ_NPME01000006.1 Protein Homology CDS 255461 255706 . + 0 ID=cds-WP_001541054.1;Parent=gene-CCO35_RS20180;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=CCO35_RS20180;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 255730 257373 . - . ID=gene-CCO35_RS20185;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=CCO35_RS20185;old_locus_tag=CCO35_20175 NZ_NPME01000006.1 Protein Homology CDS 255730 257373 . - 0 ID=cds-WP_000789682.1;Parent=gene-CCO35_RS20185;Dbxref=GenBank:WP_000789682.1;Name=WP_000789682.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=CCO35_RS20185;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789682.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 257573 259771 . - . ID=gene-CCO35_RS20190;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=CCO35_RS20190;old_locus_tag=CCO35_20180 NZ_NPME01000006.1 Protein Homology CDS 257573 259771 . - 0 ID=cds-WP_000106656.1;Parent=gene-CCO35_RS20190;Dbxref=GenBank:WP_000106656.1;Name=WP_000106656.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=CCO35_RS20190;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_000106656.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 259852 260478 . - . ID=gene-CCO35_RS20195;Name=CCO35_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20195;old_locus_tag=CCO35_20185 NZ_NPME01000006.1 Protein Homology CDS 259852 260478 . - 0 ID=cds-WP_000964735.1;Parent=gene-CCO35_RS20195;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=CCO35_RS20195;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 260620 260991 . + . ID=gene-CCO35_RS20200;Name=CCO35_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20200;old_locus_tag=CCO35_20190 NZ_NPME01000006.1 Protein Homology CDS 260620 260991 . + 0 ID=cds-WP_000042855.1;Parent=gene-CCO35_RS20200;Dbxref=GenBank:WP_000042855.1;Name=WP_000042855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=CCO35_RS20200;product=DUF2500 domain-containing protein;protein_id=WP_000042855.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 261013 261282 . - . ID=gene-CCO35_RS20205;Name=CCO35_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20205;old_locus_tag=CCO35_20195 NZ_NPME01000006.1 Protein Homology CDS 261013 261282 . - 0 ID=cds-WP_000906762.1;Parent=gene-CCO35_RS20205;Dbxref=GenBank:WP_000906762.1;Name=WP_000906762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=CCO35_RS20205;product=DUF1145 family protein;protein_id=WP_000906762.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 261272 261868 . - . ID=gene-CCO35_RS20210;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CCO35_RS20210;old_locus_tag=CCO35_20200 NZ_NPME01000006.1 Protein Homology CDS 261272 261868 . - 0 ID=cds-WP_023263138.1;Parent=gene-CCO35_RS20210;Dbxref=GenBank:WP_023263138.1;Name=WP_023263138.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=CCO35_RS20210;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_023263138.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 261994 263469 . + . ID=gene-CCO35_RS20215;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CCO35_RS20215;old_locus_tag=CCO35_20205 NZ_NPME01000006.1 Protein Homology CDS 261994 263469 . + 0 ID=cds-WP_023213327.1;Parent=gene-CCO35_RS20215;Dbxref=GenBank:WP_023213327.1;Name=WP_023213327.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=CCO35_RS20215;product=signal recognition particle-docking protein FtsY;protein_id=WP_023213327.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 263472 264140 . + . ID=gene-CCO35_RS20220;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=CCO35_RS20220;old_locus_tag=CCO35_20210 NZ_NPME01000006.1 Protein Homology CDS 263472 264140 . + 0 ID=cds-WP_000617729.1;Parent=gene-CCO35_RS20220;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=CCO35_RS20220;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 264133 265188 . + . ID=gene-CCO35_RS20225;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=CCO35_RS20225;old_locus_tag=CCO35_20215 NZ_NPME01000006.1 Protein Homology CDS 264133 265188 . + 0 ID=cds-WP_001081707.1;Parent=gene-CCO35_RS20225;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=CCO35_RS20225;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 265434 266288 . + . ID=gene-CCO35_RS20230;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=CCO35_RS20230;old_locus_tag=CCO35_20220 NZ_NPME01000006.1 Protein Homology CDS 265434 266288 . + 0 ID=cds-WP_000159621.1;Parent=gene-CCO35_RS20230;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=CCO35_RS20230;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 266610 267713 . + . ID=gene-CCO35_RS20235;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=CCO35_RS20235;old_locus_tag=CCO35_20225 NZ_NPME01000006.1 Protein Homology CDS 266610 267713 . + 0 ID=cds-WP_001528146.1;Parent=gene-CCO35_RS20235;Dbxref=GenBank:WP_001528146.1;Name=WP_001528146.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=CCO35_RS20235;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001528146.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 267797 267931 . - . ID=gene-CCO35_RS20240;Name=CCO35_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20240;old_locus_tag=CCO35_20230 NZ_NPME01000006.1 Protein Homology CDS 267797 267931 . - 0 ID=cds-WP_001517957.1;Parent=gene-CCO35_RS20240;Dbxref=GenBank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=CCO35_RS20240;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 267909 268292 . - . ID=gene-CCO35_RS20245;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=CCO35_RS20245;old_locus_tag=CCO35_20235 NZ_NPME01000006.1 Protein Homology CDS 267909 268292 . - 0 ID=cds-WP_000778873.1;Parent=gene-CCO35_RS20245;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=CCO35_RS20245;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 268714 269823 . + . ID=gene-CCO35_RS20250;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=CCO35_RS20250;old_locus_tag=CCO35_20240 NZ_NPME01000006.1 Protein Homology CDS 268714 269823 . + 0 ID=cds-WP_000822976.1;Parent=gene-CCO35_RS20250;Dbxref=GenBank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=CCO35_RS20250;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 269883 270809 . + . ID=gene-CCO35_RS20255;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=CCO35_RS20255;old_locus_tag=CCO35_20245 NZ_NPME01000006.1 Protein Homology CDS 269883 270809 . + 0 ID=cds-WP_000003007.1;Parent=gene-CCO35_RS20255;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=CCO35_RS20255;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 270806 272083 . + . ID=gene-CCO35_RS20260;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=CCO35_RS20260;old_locus_tag=CCO35_20250 NZ_NPME01000006.1 Protein Homology CDS 270806 272083 . + 0 ID=cds-WP_000803764.1;Parent=gene-CCO35_RS20260;Dbxref=GenBank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=CCO35_RS20260;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 272080 272847 . + . ID=gene-CCO35_RS20265;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=CCO35_RS20265;old_locus_tag=CCO35_20255 NZ_NPME01000006.1 Protein Homology CDS 272080 272847 . + 0 ID=cds-WP_000082083.1;Parent=gene-CCO35_RS20265;Dbxref=GenBank:WP_000082083.1;Name=WP_000082083.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=CCO35_RS20265;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082083.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 272849 273562 . + . ID=gene-CCO35_RS20270;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=CCO35_RS20270;old_locus_tag=CCO35_20260 NZ_NPME01000006.1 Protein Homology CDS 272849 273562 . + 0 ID=cds-WP_000416114.1;Parent=gene-CCO35_RS20270;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=CCO35_RS20270;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 273726 274004 . + . ID=gene-CCO35_RS20275;Name=CCO35_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20275;old_locus_tag=CCO35_20265 NZ_NPME01000006.1 Protein Homology CDS 273726 274004 . + 0 ID=cds-WP_000621258.1;Parent=gene-CCO35_RS20275;Dbxref=GenBank:WP_000621258.1;Name=WP_000621258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621258.1;locus_tag=CCO35_RS20275;product=hypothetical protein;protein_id=WP_000621258.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 274237 275553 . + . ID=gene-CCO35_RS20280;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=CCO35_RS20280;old_locus_tag=CCO35_20270 NZ_NPME01000006.1 Protein Homology CDS 274237 275553 . + 0 ID=cds-WP_000624747.1;Parent=gene-CCO35_RS20280;Dbxref=GenBank:WP_000624747.1;Name=WP_000624747.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=CCO35_RS20280;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624747.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 275658 276545 . + . ID=gene-CCO35_RS20285;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=CCO35_RS20285;old_locus_tag=CCO35_20275 NZ_NPME01000006.1 Protein Homology CDS 275658 276545 . + 0 ID=cds-WP_000099303.1;Parent=gene-CCO35_RS20285;Dbxref=GenBank:WP_000099303.1;Name=WP_000099303.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=CCO35_RS20285;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099303.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 276542 277387 . + . ID=gene-CCO35_RS20290;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=CCO35_RS20290;old_locus_tag=CCO35_20280 NZ_NPME01000006.1 Protein Homology CDS 276542 277387 . + 0 ID=cds-WP_000572196.1;Parent=gene-CCO35_RS20290;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=CCO35_RS20290;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 277390 278460 . + . ID=gene-CCO35_RS20295;Name=CCO35_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20295;old_locus_tag=CCO35_20285 NZ_NPME01000006.1 Protein Homology CDS 277390 278460 . + 0 ID=cds-WP_000907832.1;Parent=gene-CCO35_RS20295;Dbxref=GenBank:WP_000907832.1;Name=WP_000907832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=CCO35_RS20295;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907832.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 278457 279197 . + . ID=gene-CCO35_RS20300;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=CCO35_RS20300;old_locus_tag=CCO35_20290 NZ_NPME01000006.1 Protein Homology CDS 278457 279197 . + 0 ID=cds-WP_000073553.1;Parent=gene-CCO35_RS20300;Dbxref=GenBank:WP_000073553.1;Name=WP_000073553.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=CCO35_RS20300;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073553.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 279210 279626 . - . ID=gene-CCO35_RS20305;Name=CCO35_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20305;old_locus_tag=CCO35_20295 NZ_NPME01000006.1 Protein Homology CDS 279210 279626 . - 0 ID=cds-WP_000826035.1;Parent=gene-CCO35_RS20305;Dbxref=GenBank:WP_000826035.1;Name=WP_000826035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=CCO35_RS20305;product=DUF2756 family protein;protein_id=WP_000826035.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 279752 281494 . + . ID=gene-CCO35_RS20310;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=CCO35_RS20310;old_locus_tag=CCO35_20300 NZ_NPME01000006.1 Protein Homology CDS 279752 281494 . + 0 ID=cds-WP_000805102.1;Parent=gene-CCO35_RS20310;Dbxref=GenBank:WP_000805102.1;Name=WP_000805102.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=CCO35_RS20310;product=gamma-glutamyltransferase;protein_id=WP_000805102.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 281539 282573 . - . ID=gene-CCO35_RS20315;Name=CCO35_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20315;old_locus_tag=CCO35_20305 NZ_NPME01000006.1 Protein Homology CDS 281539 282573 . - 0 ID=cds-WP_000675715.1;Parent=gene-CCO35_RS20315;Dbxref=GenBank:WP_000675715.1;Name=WP_000675715.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=CCO35_RS20315;product=phosphotriesterase family protein;protein_id=WP_000675715.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 282570 283541 . - . ID=gene-CCO35_RS20320;Name=CCO35_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20320;old_locus_tag=CCO35_20310 NZ_NPME01000006.1 Protein Homology CDS 282570 283541 . - 0 ID=cds-WP_001038949.1;Parent=gene-CCO35_RS20320;Dbxref=GenBank:WP_001038949.1;Name=WP_001038949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=CCO35_RS20320;product=DMT family transporter;protein_id=WP_001038949.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 283595 284356 . - . ID=gene-CCO35_RS20325;Name=CCO35_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20325;old_locus_tag=CCO35_20315 NZ_NPME01000006.1 Protein Homology CDS 283595 284356 . - 0 ID=cds-WP_001066509.1;Parent=gene-CCO35_RS20325;Dbxref=GenBank:WP_001066509.1;Name=WP_001066509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=CCO35_RS20325;product=glutamine amidotransferase;protein_id=WP_001066509.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 284372 285586 . - . ID=gene-CCO35_RS20330;Name=CCO35_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20330;old_locus_tag=CCO35_20320 NZ_NPME01000006.1 Protein Homology CDS 284372 285586 . - 0 ID=cds-WP_000667447.1;Parent=gene-CCO35_RS20330;Dbxref=GenBank:WP_000667447.1;Name=WP_000667447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=CCO35_RS20330;product=PfkB family carbohydrate kinase;protein_id=WP_000667447.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 285851 286339 . - . ID=gene-CCO35_RS20335;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=CCO35_RS20335;old_locus_tag=CCO35_20325 NZ_NPME01000006.1 Protein Homology CDS 285851 286339 . - 0 ID=cds-WP_031567467.1;Parent=gene-CCO35_RS20335;Dbxref=GenBank:WP_031567467.1;Name=WP_031567467.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=CCO35_RS20335;product=N-acetyltransferase;protein_id=WP_031567467.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 286806 287843 . + . ID=gene-CCO35_RS20345;Name=CCO35_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20345;old_locus_tag=CCO35_20335 NZ_NPME01000006.1 Protein Homology CDS 286806 287843 . + 0 ID=cds-WP_023212581.1;Parent=gene-CCO35_RS20345;Dbxref=GenBank:WP_023212581.1;Name=WP_023212581.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=CCO35_RS20345;product=oxidoreductase;protein_id=WP_023212581.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 287967 288662 . + . ID=gene-CCO35_RS20350;Name=CCO35_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20350;old_locus_tag=CCO35_20340 NZ_NPME01000006.1 Protein Homology CDS 287967 288662 . + 0 ID=cds-WP_000639789.1;Parent=gene-CCO35_RS20350;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=CCO35_RS20350;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 288792 289787 . + . ID=gene-CCO35_RS20355;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=CCO35_RS20355;old_locus_tag=CCO35_20345 NZ_NPME01000006.1 Protein Homology CDS 288792 289787 . + 0 ID=cds-WP_000730239.1;Parent=gene-CCO35_RS20355;Dbxref=GenBank:WP_000730239.1;Name=WP_000730239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=CCO35_RS20355;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 289926 290459 . + . ID=gene-CCO35_RS20360;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CCO35_RS20360;old_locus_tag=CCO35_20350 NZ_NPME01000006.1 Protein Homology CDS 289926 290459 . + 0 ID=cds-WP_000108342.1;Parent=gene-CCO35_RS20360;Dbxref=GenBank:WP_000108342.1;Name=WP_000108342.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=CCO35_RS20360;product=gluconokinase;protein_id=WP_000108342.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 290456 291796 . + . ID=gene-CCO35_RS20365;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=CCO35_RS20365;old_locus_tag=CCO35_20355 NZ_NPME01000006.1 Protein Homology CDS 290456 291796 . + 0 ID=cds-WP_000105950.1;Parent=gene-CCO35_RS20365;Dbxref=GenBank:WP_000105950.1;Name=WP_000105950.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=CCO35_RS20365;product=gluconate transporter;protein_id=WP_000105950.1;transl_table=11 NZ_NPME01000006.1 RefSeq pseudogene 291719 292093 . - . ID=gene-CCO35_RS20370;Name=CCO35_RS20370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS20370;old_locus_tag=CCO35_20360;partial=true;pseudo=true;start_range=.,291719 NZ_NPME01000006.1 Protein Homology CDS 291719 292093 . - 0 ID=cds-CCO35_RS20370;Parent=gene-CCO35_RS20370;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=CCO35_RS20370;partial=true;product=MarC family protein;pseudo=true;start_range=.,291719;transl_table=11 NZ_NPME01000006.1 RefSeq gene 292220 293326 . + . ID=gene-CCO35_RS20375;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO35_RS20375;old_locus_tag=CCO35_20365 NZ_NPME01000006.1 Protein Homology CDS 292220 293326 . + 0 ID=cds-WP_000799940.1;Parent=gene-CCO35_RS20375;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=CCO35_RS20375;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 293704 295890 . + . ID=gene-CCO35_RS20380;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=CCO35_RS20380;old_locus_tag=CCO35_20370 NZ_NPME01000006.1 Protein Homology CDS 293704 295890 . + 0 ID=cds-WP_000098553.1;Parent=gene-CCO35_RS20380;Dbxref=GenBank:WP_000098553.1;Name=WP_000098553.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=CCO35_RS20380;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098553.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 295887 297863 . + . ID=gene-CCO35_RS20385;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO35_RS20385;old_locus_tag=CCO35_20375 NZ_NPME01000006.1 Protein Homology CDS 295887 297863 . + 0 ID=cds-WP_031567481.1;Parent=gene-CCO35_RS20385;Dbxref=GenBank:WP_031567481.1;Name=WP_031567481.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=CCO35_RS20385;product=glycogen debranching protein GlgX;protein_id=WP_031567481.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 297878 299173 . + . ID=gene-CCO35_RS20390;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=CCO35_RS20390;old_locus_tag=CCO35_20380 NZ_NPME01000006.1 Protein Homology CDS 297878 299173 . + 0 ID=cds-WP_000253995.1;Parent=gene-CCO35_RS20390;Dbxref=GenBank:WP_000253995.1;Name=WP_000253995.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=CCO35_RS20390;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253995.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 299173 300606 . + . ID=gene-CCO35_RS20395;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=CCO35_RS20395;old_locus_tag=CCO35_20385 NZ_NPME01000006.1 Protein Homology CDS 299173 300606 . + 0 ID=cds-WP_001197669.1;Parent=gene-CCO35_RS20395;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=CCO35_RS20395;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 300626 303073 . + . ID=gene-CCO35_RS20400;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=CCO35_RS20400;old_locus_tag=CCO35_20390 NZ_NPME01000006.1 Protein Homology CDS 300626 303073 . + 0 ID=cds-WP_000993424.1;Parent=gene-CCO35_RS20400;Dbxref=GenBank:WP_000993424.1;Name=WP_000993424.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=CCO35_RS20400;product=glycogen phosphorylase;protein_id=WP_000993424.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 303173 303715 . + . ID=gene-CCO35_RS20405;Name=CCO35_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20405;old_locus_tag=CCO35_20395 NZ_NPME01000006.1 Protein Homology CDS 303173 303715 . + 0 ID=cds-WP_000338410.1;Parent=gene-CCO35_RS20405;Dbxref=GenBank:WP_000338410.1;Name=WP_000338410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338410.1;locus_tag=CCO35_RS20405;product=hypothetical protein;protein_id=WP_000338410.1;transl_table=11 NZ_NPME01000006.1 RefSeq pseudogene 303847 304254 . + . ID=gene-CCO35_RS20410;Name=CCO35_RS20410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS20410;old_locus_tag=CCO35_20400;partial=true;pseudo=true;start_range=.,303847 NZ_NPME01000006.1 Protein Homology CDS 303847 304254 . + 0 ID=cds-CCO35_RS20410;Parent=gene-CCO35_RS20410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462430.1;locus_tag=CCO35_RS20410;partial=true;product=PstS family phosphate ABC transporter substrate-binding protein;pseudo=true;start_range=.,303847;transl_table=11 NZ_NPME01000006.1 RefSeq gene 304264 304971 . + . ID=gene-CCO35_RS20415;Name=CCO35_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20415;old_locus_tag=CCO35_20405 NZ_NPME01000006.1 Protein Homology CDS 304264 304971 . + 0 ID=cds-WP_031567492.1;Parent=gene-CCO35_RS20415;Dbxref=GenBank:WP_031567492.1;Name=WP_031567492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728069.1;locus_tag=CCO35_RS20415;product=hypothetical protein;protein_id=WP_031567492.1;transl_table=11 NZ_NPME01000006.1 RefSeq pseudogene 304965 305384 . + . ID=gene-CCO35_RS20420;Name=CCO35_RS20420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS20420;old_locus_tag=CCO35_20410;partial=true;pseudo=true;start_range=.,304965 NZ_NPME01000006.1 Protein Homology CDS 304965 305384 . + 0 ID=cds-CCO35_RS20420;Parent=gene-CCO35_RS20420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=CCO35_RS20420;partial=true;product=hypothetical protein;pseudo=true;start_range=.,304965;transl_table=11 NZ_NPME01000006.1 RefSeq gene 305431 306939 . - . ID=gene-CCO35_RS20425;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=CCO35_RS20425;old_locus_tag=CCO35_20415 NZ_NPME01000006.1 Protein Homology CDS 305431 306939 . - 0 ID=cds-WP_000448181.1;Parent=gene-CCO35_RS20425;Dbxref=GenBank:WP_000448181.1;Name=WP_000448181.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=CCO35_RS20425;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448181.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 307138 307464 . + . ID=gene-CCO35_RS20430;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=CCO35_RS20430;old_locus_tag=CCO35_20420 NZ_NPME01000006.1 Protein Homology CDS 307138 307464 . + 0 ID=cds-WP_000434523.1;Parent=gene-CCO35_RS20430;Dbxref=GenBank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=CCO35_RS20430;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 307540 308370 . + . ID=gene-CCO35_RS20435;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=CCO35_RS20435;old_locus_tag=CCO35_20425 NZ_NPME01000006.1 Protein Homology CDS 307540 308370 . + 0 ID=cds-WP_000928701.1;Parent=gene-CCO35_RS20435;Dbxref=GenBank:WP_000928701.1;Name=WP_000928701.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=CCO35_RS20435;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928701.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 308464 309222 . + . ID=gene-CCO35_RS20440;Name=CCO35_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20440;old_locus_tag=CCO35_20430 NZ_NPME01000006.1 Protein Homology CDS 308464 309222 . + 0 ID=cds-WP_000815084.1;Parent=gene-CCO35_RS20440;Dbxref=GenBank:WP_000815084.1;Name=WP_000815084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=CCO35_RS20440;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815084.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 309247 311952 . - . ID=gene-CCO35_RS20445;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=CCO35_RS20445;old_locus_tag=CCO35_20435 NZ_NPME01000006.1 Protein Homology CDS 309247 311952 . - 0 ID=cds-WP_000907030.1;Parent=gene-CCO35_RS20445;Dbxref=GenBank:WP_000907030.1;Name=WP_000907030.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=CCO35_RS20445;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907030.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 312546 314939 . + . ID=gene-CCO35_RS20450;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=CCO35_RS20450;old_locus_tag=CCO35_20440 NZ_NPME01000006.1 Protein Homology CDS 312546 314939 . + 0 ID=cds-WP_000082251.1;Parent=gene-CCO35_RS20450;Dbxref=GenBank:WP_000082251.1;Name=WP_000082251.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=CCO35_RS20450;product=maltodextrin phosphorylase;protein_id=WP_000082251.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 314949 317027 . + . ID=gene-CCO35_RS20455;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=CCO35_RS20455;old_locus_tag=CCO35_20445 NZ_NPME01000006.1 Protein Homology CDS 314949 317027 . + 0 ID=cds-WP_000428707.1;Parent=gene-CCO35_RS20455;Dbxref=GenBank:WP_000428707.1;Name=WP_000428707.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=CCO35_RS20455;product=4-alpha-glucanotransferase;protein_id=WP_000428707.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 317146 318462 . - . ID=gene-CCO35_RS20460;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=CCO35_RS20460;old_locus_tag=CCO35_20450 NZ_NPME01000006.1 Protein Homology CDS 317146 318462 . - 0 ID=cds-WP_001131741.1;Parent=gene-CCO35_RS20460;Dbxref=GenBank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=CCO35_RS20460;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 318839 319414 . - . ID=gene-CCO35_RS20465;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=CCO35_RS20465;old_locus_tag=CCO35_20455 NZ_NPME01000006.1 Protein Homology CDS 318839 319414 . - 0 ID=cds-WP_000619387.1;Parent=gene-CCO35_RS20465;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=CCO35_RS20465;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 319473 320156 . - . ID=gene-CCO35_RS20470;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=CCO35_RS20470;old_locus_tag=CCO35_20460 NZ_NPME01000006.1 Protein Homology CDS 319473 320156 . - 0 ID=cds-WP_000958733.1;Parent=gene-CCO35_RS20470;Dbxref=GenBank:WP_000958733.1;Name=WP_000958733.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=CCO35_RS20470;product=DNA utilization protein GntX;protein_id=WP_000958733.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 320194 320964 . + . ID=gene-CCO35_RS20475;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=CCO35_RS20475;old_locus_tag=CCO35_20465 NZ_NPME01000006.1 Protein Homology CDS 320194 320964 . + 0 ID=cds-WP_000998138.1;Parent=gene-CCO35_RS20475;Dbxref=GenBank:WP_000998138.1;Name=WP_000998138.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=CCO35_RS20475;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998138.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 321000 321938 . - . ID=gene-CCO35_RS20480;Name=CCO35_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20480;old_locus_tag=CCO35_20470 NZ_NPME01000006.1 Protein Homology CDS 321000 321938 . - 0 ID=cds-WP_094965377.1;Parent=gene-CCO35_RS20480;Dbxref=GenBank:WP_094965377.1;Name=WP_094965377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=CCO35_RS20480;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_094965377.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 322173 322409 . - . ID=gene-CCO35_RS20485;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=CCO35_RS20485;old_locus_tag=CCO35_20475 NZ_NPME01000006.1 Protein Homology CDS 322173 322409 . - 0 ID=cds-WP_000157589.1;Parent=gene-CCO35_RS20485;Dbxref=GenBank:WP_000157589.1;Name=WP_000157589.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=CCO35_RS20485;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157589.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 322422 324740 . - . ID=gene-CCO35_RS20490;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CCO35_RS20490;old_locus_tag=CCO35_20480 NZ_NPME01000006.1 Protein Homology CDS 322422 324740 . - 0 ID=cds-WP_000736970.1;Parent=gene-CCO35_RS20490;Dbxref=GenBank:WP_000736970.1;Name=WP_000736970.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=CCO35_RS20490;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000736970.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 324759 324986 . - . ID=gene-CCO35_RS20495;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=CCO35_RS20495;old_locus_tag=CCO35_20485 NZ_NPME01000006.1 Protein Homology CDS 324759 324986 . - 0 ID=cds-WP_001160955.1;Parent=gene-CCO35_RS20495;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=CCO35_RS20495;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 325423 327753 . - . ID=gene-CCO35_RS20505;Name=CCO35_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20505;old_locus_tag=CCO35_20495 NZ_NPME01000006.1 Protein Homology CDS 325423 327753 . - 0 ID=cds-WP_031567535.1;Parent=gene-CCO35_RS20505;Dbxref=GenBank:WP_031567535.1;Name=WP_031567535.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=CCO35_RS20505;product=Tex family protein;protein_id=WP_031567535.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 327852 328325 . - . ID=gene-CCO35_RS20510;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=CCO35_RS20510;old_locus_tag=CCO35_20500 NZ_NPME01000006.1 Protein Homology CDS 327852 328325 . - 0 ID=cds-WP_000856695.1;Parent=gene-CCO35_RS20510;Dbxref=GenBank:WP_000856695.1;Name=WP_000856695.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=CCO35_RS20510;product=transcription elongation factor GreB;protein_id=WP_000856695.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 328551 329270 . + . ID=gene-CCO35_RS20515;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=CCO35_RS20515;old_locus_tag=CCO35_20505 NZ_NPME01000006.1 Protein Homology CDS 328551 329270 . + 0 ID=cds-WP_001157751.1;Parent=gene-CCO35_RS20515;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=CCO35_RS20515;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 329267 330619 . + . ID=gene-CCO35_RS20520;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=CCO35_RS20520;old_locus_tag=CCO35_20510 NZ_NPME01000006.1 Protein Homology CDS 329267 330619 . + 0 ID=cds-WP_001253818.1;Parent=gene-CCO35_RS20520;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=CCO35_RS20520;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 330694 332313 . - . ID=gene-CCO35_RS20525;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CCO35_RS20525;old_locus_tag=CCO35_20515 NZ_NPME01000006.1 Protein Homology CDS 330694 332313 . - 0 ID=cds-WP_001265689.1;Parent=gene-CCO35_RS20525;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=CCO35_RS20525;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 332693 334402 . + . ID=gene-CCO35_RS20530;Name=CCO35_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20530;old_locus_tag=CCO35_20520 NZ_NPME01000006.1 Protein Homology CDS 332693 334402 . + 0 ID=cds-WP_031567536.1;Parent=gene-CCO35_RS20530;Dbxref=GenBank:WP_031567536.1;Name=WP_031567536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=CCO35_RS20530;product=DUF4153 domain-containing protein;protein_id=WP_031567536.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 334511 335389 . - . ID=gene-CCO35_RS20535;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CCO35_RS20535;old_locus_tag=CCO35_20525 NZ_NPME01000006.1 Protein Homology CDS 334511 335389 . - 0 ID=cds-WP_001135571.1;Parent=gene-CCO35_RS20535;Dbxref=GenBank:WP_001135571.1;Name=WP_001135571.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=CCO35_RS20535;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135571.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 335414 335815 . - . ID=gene-CCO35_RS20540;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=CCO35_RS20540;old_locus_tag=CCO35_20530 NZ_NPME01000006.1 Protein Homology CDS 335414 335815 . - 0 ID=cds-WP_000660721.1;Parent=gene-CCO35_RS20540;Dbxref=GenBank:WP_000660721.1;Name=WP_000660721.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=CCO35_RS20540;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660721.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 335826 336494 . - . ID=gene-CCO35_RS20545;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=CCO35_RS20545;old_locus_tag=CCO35_20535 NZ_NPME01000006.1 Protein Homology CDS 335826 336494 . - 0 ID=cds-WP_001520508.1;Parent=gene-CCO35_RS20545;Dbxref=GenBank:WP_001520508.1;Name=WP_001520508.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=CCO35_RS20545;product=GMP/IMP nucleotidase;protein_id=WP_001520508.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 336559 338691 . - . ID=gene-CCO35_RS20550;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=CCO35_RS20550;old_locus_tag=CCO35_20540 NZ_NPME01000006.1 Protein Homology CDS 336559 338691 . - 0 ID=cds-WP_000104092.1;Parent=gene-CCO35_RS20550;Dbxref=GenBank:WP_000104092.1;Name=WP_000104092.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=CCO35_RS20550;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104092.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 339014 339577 . + . ID=gene-CCO35_RS20555;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=CCO35_RS20555;old_locus_tag=CCO35_20545 NZ_NPME01000006.1 Protein Homology CDS 339014 339577 . + 0 ID=cds-WP_000045725.1;Parent=gene-CCO35_RS20555;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=CCO35_RS20555;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 339673 342225 . - . ID=gene-CCO35_RS20560;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=CCO35_RS20560;old_locus_tag=CCO35_20550 NZ_NPME01000006.1 Protein Homology CDS 339673 342225 . - 0 ID=cds-WP_000673815.1;Parent=gene-CCO35_RS20560;Dbxref=GenBank:WP_000673815.1;Name=WP_000673815.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=CCO35_RS20560;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_000673815.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 342346 343125 . + . ID=gene-CCO35_RS20565;Name=CCO35_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20565;old_locus_tag=CCO35_20555 NZ_NPME01000006.1 Protein Homology CDS 342346 343125 . + 0 ID=cds-WP_000874742.1;Parent=gene-CCO35_RS20565;Dbxref=GenBank:WP_000874742.1;Name=WP_000874742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=CCO35_RS20565;product=hypothetical protein;protein_id=WP_000874742.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 343125 343664 . + . ID=gene-CCO35_RS20570;Name=CCO35_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20570;old_locus_tag=CCO35_20560 NZ_NPME01000006.1 Protein Homology CDS 343125 343664 . + 0 ID=cds-WP_000951385.1;Parent=gene-CCO35_RS20570;Dbxref=GenBank:WP_000951385.1;Name=WP_000951385.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=CCO35_RS20570;product=PilN domain-containing protein;protein_id=WP_000951385.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 343648 344121 . + . ID=gene-CCO35_RS20575;Name=CCO35_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20575;old_locus_tag=CCO35_20565 NZ_NPME01000006.1 Protein Homology CDS 343648 344121 . + 0 ID=cds-WP_088546021.1;Parent=gene-CCO35_RS20575;Dbxref=GenBank:WP_088546021.1;Name=WP_088546021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=CCO35_RS20575;product=hypothetical protein;protein_id=WP_088546021.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 344111 344512 . + . ID=gene-CCO35_RS20580;Name=CCO35_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20580;old_locus_tag=CCO35_20570 NZ_NPME01000006.1 Protein Homology CDS 344111 344512 . + 0 ID=cds-WP_023208276.1;Parent=gene-CCO35_RS20580;Dbxref=GenBank:WP_023208276.1;Name=WP_023208276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=CCO35_RS20580;product=HofP DNA utilization family protein;protein_id=WP_023208276.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 344427 345665 . + . ID=gene-CCO35_RS20585;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=CCO35_RS20585;old_locus_tag=CCO35_20575 NZ_NPME01000006.1 Protein Homology CDS 344427 345665 . + 0 ID=cds-WP_088546022.1;Parent=gene-CCO35_RS20585;Dbxref=GenBank:WP_088546022.1;Name=WP_088546022.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=CCO35_RS20585;product=DNA uptake porin HofQ;protein_id=WP_088546022.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 346130 346651 . + . ID=gene-CCO35_RS20600;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=CCO35_RS20600;old_locus_tag=CCO35_20590 NZ_NPME01000006.1 Protein Homology CDS 346130 346651 . + 0 ID=cds-WP_000818621.1;Parent=gene-CCO35_RS20600;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=CCO35_RS20600;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 346708 347796 . + . ID=gene-CCO35_RS20605;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CCO35_RS20605;old_locus_tag=CCO35_20595 NZ_NPME01000006.1 Protein Homology CDS 346708 347796 . + 0 ID=cds-WP_000439821.1;Parent=gene-CCO35_RS20605;Dbxref=GenBank:WP_000439821.1;Name=WP_000439821.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=CCO35_RS20605;product=3-dehydroquinate synthase;protein_id=WP_000439821.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 347894 349171 . + . ID=gene-CCO35_RS20610;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=CCO35_RS20610;old_locus_tag=CCO35_20600 NZ_NPME01000006.1 Protein Homology CDS 347894 349171 . + 0 ID=cds-WP_094965378.1;Parent=gene-CCO35_RS20610;Dbxref=GenBank:WP_094965378.1;Name=WP_094965378.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=CCO35_RS20610;product=cell division protein DamX;protein_id=WP_094965378.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 349352 350188 . + . ID=gene-CCO35_RS20615;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=CCO35_RS20615;old_locus_tag=CCO35_20605 NZ_NPME01000006.1 Protein Homology CDS 349352 350188 . + 0 ID=cds-WP_000742132.1;Parent=gene-CCO35_RS20615;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=CCO35_RS20615;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 350206 350883 . + . ID=gene-CCO35_RS20620;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CCO35_RS20620;old_locus_tag=CCO35_20610 NZ_NPME01000006.1 Protein Homology CDS 350206 350883 . + 0 ID=cds-WP_000816283.1;Parent=gene-CCO35_RS20620;Dbxref=GenBank:WP_000816283.1;Name=WP_000816283.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=CCO35_RS20620;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816283.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 350876 351634 . + . ID=gene-CCO35_RS20625;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=CCO35_RS20625;old_locus_tag=CCO35_20615 NZ_NPME01000006.1 Protein Homology CDS 350876 351634 . + 0 ID=cds-WP_000359652.1;Parent=gene-CCO35_RS20625;Dbxref=GenBank:WP_000359652.1;Name=WP_000359652.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=CCO35_RS20625;product=phosphoglycolate phosphatase;protein_id=WP_000359652.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 351627 352631 . + . ID=gene-CCO35_RS20630;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO35_RS20630;old_locus_tag=CCO35_20620 NZ_NPME01000006.1 Protein Homology CDS 351627 352631 . + 0 ID=cds-WP_000165562.1;Parent=gene-CCO35_RS20630;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=CCO35_RS20630;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 352776 352946 . - . ID=gene-CCO35_RS20635;Name=CCO35_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20635;old_locus_tag=CCO35_20625 NZ_NPME01000006.1 Protein Homology CDS 352776 352946 . - 0 ID=cds-WP_000472321.1;Parent=gene-CCO35_RS20635;Dbxref=GenBank:WP_000472321.1;Name=WP_000472321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=CCO35_RS20635;product=YhfL family protein;protein_id=WP_000472321.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 353140 358764 . - . ID=gene-CCO35_RS20640;Name=CCO35_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20640;old_locus_tag=CCO35_20630 NZ_NPME01000006.1 Protein Homology CDS 353140 358764 . - 0 ID=cds-WP_094965379.1;Parent=gene-CCO35_RS20640;Dbxref=GenBank:WP_094965379.1;Name=WP_094965379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747946.1;locus_tag=CCO35_RS20640;product=autotransporter domain-containing protein;protein_id=WP_094965379.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 359101 360474 . - . ID=gene-CCO35_RS20645;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=CCO35_RS20645;old_locus_tag=CCO35_20635 NZ_NPME01000006.1 Protein Homology CDS 359101 360474 . - 0 ID=cds-WP_000349904.1;Parent=gene-CCO35_RS20645;Dbxref=GenBank:WP_000349904.1;Name=WP_000349904.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=CCO35_RS20645;product=siroheme synthase CysG;protein_id=WP_000349904.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 360486 361295 . - . ID=gene-CCO35_RS20650;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=CCO35_RS20650;old_locus_tag=CCO35_20640 NZ_NPME01000006.1 Protein Homology CDS 360486 361295 . - 0 ID=cds-WP_000493571.1;Parent=gene-CCO35_RS20650;Dbxref=GenBank:WP_000493571.1;Name=WP_000493571.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=CCO35_RS20650;product=nitrite transporter NirC;protein_id=WP_000493571.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 361560 361886 . - . ID=gene-CCO35_RS20655;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CCO35_RS20655;old_locus_tag=CCO35_20645 NZ_NPME01000006.1 Protein Homology CDS 361560 361886 . - 0 ID=cds-WP_000084812.1;Parent=gene-CCO35_RS20655;Dbxref=GenBank:WP_000084812.1;Name=WP_000084812.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=CCO35_RS20655;product=nitrite reductase small subunit NirD;protein_id=WP_000084812.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 361883 364426 . - . ID=gene-CCO35_RS20660;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CCO35_RS20660;old_locus_tag=CCO35_20650 NZ_NPME01000006.1 Protein Homology CDS 361883 364426 . - 0 ID=cds-WP_000049256.1;Parent=gene-CCO35_RS20660;Dbxref=GenBank:WP_000049256.1;Name=WP_000049256.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=CCO35_RS20660;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049256.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 364746 365927 . - . ID=gene-CCO35_RS20665;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=CCO35_RS20665;old_locus_tag=CCO35_20655 NZ_NPME01000006.1 Protein Homology CDS 364746 365927 . - 0 ID=cds-WP_000185265.1;Parent=gene-CCO35_RS20665;Dbxref=GenBank:WP_000185265.1;Name=WP_000185265.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=CCO35_RS20665;product=MFS transporter TsgA;protein_id=WP_000185265.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 366204 366776 . + . ID=gene-CCO35_RS20670;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=CCO35_RS20670;old_locus_tag=CCO35_20660 NZ_NPME01000006.1 Protein Homology CDS 366204 366776 . + 0 ID=cds-WP_000920478.1;Parent=gene-CCO35_RS20670;Dbxref=GenBank:WP_000920478.1;Name=WP_000920478.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=CCO35_RS20670;product=peptidylprolyl isomerase A;protein_id=WP_000920478.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 366890 367057 . + . ID=gene-CCO35_RS20675;Name=CCO35_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20675;old_locus_tag=CCO35_20665 NZ_NPME01000006.1 Protein Homology CDS 366890 367057 . + 0 ID=cds-WP_001519136.1;Parent=gene-CCO35_RS20675;Dbxref=GenBank:WP_001519136.1;Name=WP_001519136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=CCO35_RS20675;product=YhfG family protein;protein_id=WP_001519136.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 367047 367649 . + . ID=gene-CCO35_RS20680;Name=CCO35_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20680;old_locus_tag=CCO35_20670 NZ_NPME01000006.1 Protein Homology CDS 367047 367649 . + 0 ID=cds-WP_001280675.1;Parent=gene-CCO35_RS20680;Dbxref=GenBank:WP_001280675.1;Name=WP_001280675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=CCO35_RS20680;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280675.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 367681 368244 . + . ID=gene-CCO35_RS20685;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=CCO35_RS20685;old_locus_tag=CCO35_20675 NZ_NPME01000006.1 Protein Homology CDS 367681 368244 . + 0 ID=cds-WP_000601879.1;Parent=gene-CCO35_RS20685;Dbxref=GenBank:WP_000601879.1;Name=WP_000601879.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=CCO35_RS20685;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601879.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 368330 369547 . + . ID=gene-CCO35_RS20690;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=CCO35_RS20690;old_locus_tag=CCO35_20680 NZ_NPME01000006.1 Protein Homology CDS 368330 369547 . + 0 ID=cds-WP_000190027.1;Parent=gene-CCO35_RS20690;Dbxref=GenBank:WP_000190027.1;Name=WP_000190027.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=CCO35_RS20690;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000190027.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 369590 371677 . - . ID=gene-CCO35_RS20695;Name=CCO35_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20695;old_locus_tag=CCO35_20685 NZ_NPME01000006.1 Protein Homology CDS 369590 371677 . - 0 ID=cds-WP_000269311.1;Parent=gene-CCO35_RS20695;Dbxref=GenBank:WP_000269311.1;Name=WP_000269311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=CCO35_RS20695;product=YccS/YhfK family putative transporter;protein_id=WP_000269311.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 371726 372358 . - . ID=gene-CCO35_RS20700;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=CCO35_RS20700;old_locus_tag=CCO35_20690 NZ_NPME01000006.1 Protein Homology CDS 371726 372358 . - 0 ID=cds-WP_000242758.1;Parent=gene-CCO35_RS20700;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=CCO35_RS20700;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 372666 373070 . + . ID=gene-CCO35_RS20705;Name=CCO35_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20705;old_locus_tag=CCO35_20695 NZ_NPME01000006.1 Protein Homology CDS 372666 373070 . + 0 ID=cds-WP_001148919.1;Parent=gene-CCO35_RS20705;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=CCO35_RS20705;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 373166 374035 . - . ID=gene-CCO35_RS20710;Name=CCO35_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20710;old_locus_tag=CCO35_20700 NZ_NPME01000006.1 Protein Homology CDS 373166 374035 . - 0 ID=cds-WP_001274690.1;Parent=gene-CCO35_RS20710;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=CCO35_RS20710;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 374087 374305 . - . ID=gene-CCO35_RS20715;Name=CCO35_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20715;old_locus_tag=CCO35_20705 NZ_NPME01000006.1 Protein Homology CDS 374087 374305 . - 0 ID=cds-WP_000586568.1;Parent=gene-CCO35_RS20715;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=CCO35_RS20715;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 374302 375369 . - . ID=gene-CCO35_RS20720;Name=CCO35_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20720;old_locus_tag=CCO35_20710 NZ_NPME01000006.1 Protein Homology CDS 374302 375369 . - 0 ID=cds-WP_001214117.1;Parent=gene-CCO35_RS20720;Dbxref=GenBank:WP_001214117.1;Name=WP_001214117.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=CCO35_RS20720;product=hydrolase;protein_id=WP_001214117.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 375567 375878 . + . ID=gene-CCO35_RS20730;Name=CCO35_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20730;old_locus_tag=CCO35_20720 NZ_NPME01000006.1 Protein Homology CDS 375567 375878 . + 0 ID=cds-WP_000047689.1;Parent=gene-CCO35_RS20730;Dbxref=GenBank:WP_000047689.1;Name=WP_000047689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=CCO35_RS20730;product=monooxygenase;protein_id=WP_000047689.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 375880 376101 . - . ID=gene-CCO35_RS20735;Name=CCO35_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20735;old_locus_tag=CCO35_20725 NZ_NPME01000006.1 Protein Homology CDS 375880 376101 . - 0 ID=cds-WP_001054030.1;Parent=gene-CCO35_RS20735;Dbxref=GenBank:WP_001054030.1;Name=WP_001054030.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=CCO35_RS20735;product=helix-turn-helix domain-containing protein;protein_id=WP_001054030.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 376117 378024 . - . ID=gene-CCO35_RS20740;Name=CCO35_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20740;old_locus_tag=CCO35_20730 NZ_NPME01000006.1 Protein Homology CDS 376117 378024 . - 0 ID=cds-WP_000634765.1;Parent=gene-CCO35_RS20740;Dbxref=GenBank:WP_000634765.1;Name=WP_000634765.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=CCO35_RS20740;product=ABC transporter ATP-binding protein;protein_id=WP_000634765.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 378290 378841 . + . ID=gene-CCO35_RS20745;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=CCO35_RS20745;old_locus_tag=CCO35_20735 NZ_NPME01000006.1 Protein Homology CDS 378290 378841 . + 0 ID=cds-WP_000081820.1;Parent=gene-CCO35_RS20745;Dbxref=GenBank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=CCO35_RS20745;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 378841 380646 . + . ID=gene-CCO35_RS20750;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=CCO35_RS20750;old_locus_tag=CCO35_20740 NZ_NPME01000006.1 Protein Homology CDS 378841 380646 . + 0 ID=cds-WP_000398129.1;Parent=gene-CCO35_RS20750;Dbxref=GenBank:WP_000398129.1;Name=WP_000398129.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=CCO35_RS20750;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000398129.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 380656 380856 . + . ID=gene-CCO35_RS20755;Name=CCO35_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20755;old_locus_tag=CCO35_20745 NZ_NPME01000006.1 Protein Homology CDS 380656 380856 . + 0 ID=cds-WP_001007735.1;Parent=gene-CCO35_RS20755;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=CCO35_RS20755;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11 NZ_NPME01000006.1 RefSeq gene 380951 381541 . + . ID=gene-CCO35_RS20760;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=CCO35_RS20760;old_locus_tag=CCO35_20750 NZ_NPME01000006.1 Protein Homology CDS 380951 381541 . + 0 ID=cds-WP_000861341.1;Parent=gene-CCO35_RS20760;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=CCO35_RS20760;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11 ##sequence-region NZ_NPME01000007.1 1 131601 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000007.1 RefSeq region 1 131601 . + . ID=NZ_NPME01000007.1:1..131601;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000007.1 RefSeq gene 1 110 . - . ID=gene-CCO35_RS20765;Name=CCO35_RS20765;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS20765;old_locus_tag=CCO35_20755;partial=true;start_range=.,1 NZ_NPME01000007.1 cmsearch rRNA 1 110 . - . ID=rna-CCO35_RS20765;Parent=gene-CCO35_RS20765;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS20765;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_NPME01000007.1 cmsearch exon 1 110 . - . ID=exon-CCO35_RS20765-1;Parent=rna-CCO35_RS20765;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS20765;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_NPME01000007.1 RefSeq gene 490 1341 . - . ID=gene-CCO35_RS20770;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=CCO35_RS20770;old_locus_tag=CCO35_20760 NZ_NPME01000007.1 Protein Homology CDS 490 1341 . - 0 ID=cds-WP_000201812.1;Parent=gene-CCO35_RS20770;Dbxref=GenBank:WP_000201812.1;Name=WP_000201812.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=CCO35_RS20770;product=glutamate racemase;protein_id=WP_000201812.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 1286 3130 . - . ID=gene-CCO35_RS20775;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=CCO35_RS20775;old_locus_tag=CCO35_20765 NZ_NPME01000007.1 Protein Homology CDS 1286 3130 . - 0 ID=cds-WP_080148227.1;Parent=gene-CCO35_RS20775;Dbxref=GenBank:WP_080148227.1;Name=WP_080148227.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=CCO35_RS20775;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_080148227.1;transl_table=11 NZ_NPME01000007.1 cmsearch riboswitch 3197 3389 . - . ID=id-NZ_NPME01000007.1:3197..3389;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPME01000007.1 RefSeq gene 3504 4604 . + . ID=gene-CCO35_RS20780;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=CCO35_RS20780;old_locus_tag=CCO35_20770 NZ_NPME01000007.1 Protein Homology CDS 3504 4604 . + 0 ID=cds-WP_001528904.1;Parent=gene-CCO35_RS20780;Dbxref=GenBank:WP_001528904.1;Name=WP_001528904.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=CCO35_RS20780;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_001528904.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 4651 5010 . - . ID=gene-CCO35_RS20785;Name=CCO35_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20785;old_locus_tag=CCO35_20775 NZ_NPME01000007.1 Protein Homology CDS 4651 5010 . - 0 ID=cds-WP_000813838.1;Parent=gene-CCO35_RS20785;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=CCO35_RS20785;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 5026 5661 . - . ID=gene-CCO35_RS20790;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=CCO35_RS20790;old_locus_tag=CCO35_20780 NZ_NPME01000007.1 Protein Homology CDS 5026 5661 . - 0 ID=cds-WP_000971958.1;Parent=gene-CCO35_RS20790;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=CCO35_RS20790;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 5860 7260 . + . ID=gene-CCO35_RS20800;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO35_RS20800;old_locus_tag=CCO35_20785 NZ_NPME01000007.1 Protein Homology CDS 5860 7260 . + 0 ID=cds-WP_001120789.1;Parent=gene-CCO35_RS20800;Dbxref=GenBank:WP_001120789.1;Name=WP_001120789.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=CCO35_RS20800;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120789.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 7243 8160 . - . ID=gene-CCO35_RS20805;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=CCO35_RS20805;old_locus_tag=CCO35_20790 NZ_NPME01000007.1 Protein Homology CDS 7243 8160 . - 0 ID=cds-WP_001025919.1;Parent=gene-CCO35_RS20805;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=CCO35_RS20805;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 8444 9820 . - . ID=gene-CCO35_RS20815;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CCO35_RS20815;old_locus_tag=CCO35_20800 NZ_NPME01000007.1 Protein Homology CDS 8444 9820 . - 0 ID=cds-WP_031571423.1;Parent=gene-CCO35_RS20815;Dbxref=GenBank:WP_031571423.1;Name=WP_031571423.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=CCO35_RS20815;product=argininosuccinate lyase;protein_id=WP_031571423.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 9938 10714 . - . ID=gene-CCO35_RS20820;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=CCO35_RS20820;old_locus_tag=CCO35_20805 NZ_NPME01000007.1 Protein Homology CDS 9938 10714 . - 0 ID=cds-WP_088524128.1;Parent=gene-CCO35_RS20820;Dbxref=GenBank:WP_088524128.1;Name=WP_088524128.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=CCO35_RS20820;product=acetylglutamate kinase;protein_id=WP_088524128.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 10722 11726 . - . ID=gene-CCO35_RS20825;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=CCO35_RS20825;old_locus_tag=CCO35_20810 NZ_NPME01000007.1 Protein Homology CDS 10722 11726 . - 0 ID=cds-WP_000935333.1;Parent=gene-CCO35_RS20825;Dbxref=GenBank:WP_000935333.1;Name=WP_000935333.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=CCO35_RS20825;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935333.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 11815 12966 . + . ID=gene-CCO35_RS20830;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=CCO35_RS20830;old_locus_tag=CCO35_20815 NZ_NPME01000007.1 Protein Homology CDS 11815 12966 . + 0 ID=cds-WP_000800208.1;Parent=gene-CCO35_RS20830;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=CCO35_RS20830;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 13358 16009 . + . ID=gene-CCO35_RS20840;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=CCO35_RS20840;old_locus_tag=CCO35_20820 NZ_NPME01000007.1 Protein Homology CDS 13358 16009 . + 0 ID=cds-WP_001005549.1;Parent=gene-CCO35_RS20840;Dbxref=GenBank:WP_001005549.1;Name=WP_001005549.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=CCO35_RS20840;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005549.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 16220 17953 . + . ID=gene-CCO35_RS20845;Name=CCO35_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20845;old_locus_tag=CCO35_20825 NZ_NPME01000007.1 Protein Homology CDS 16220 17953 . + 0 ID=cds-WP_001192092.1;Parent=gene-CCO35_RS20845;Dbxref=GenBank:WP_001192092.1;Name=WP_001192092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=CCO35_RS20845;product=phosphoethanolamine transferase CptA;protein_id=WP_001192092.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 18114 18950 . + . ID=gene-CCO35_RS20850;Name=CCO35_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20850;old_locus_tag=CCO35_20830 NZ_NPME01000007.1 Protein Homology CDS 18114 18950 . + 0 ID=cds-WP_000274595.1;Parent=gene-CCO35_RS20850;Dbxref=GenBank:WP_000274595.1;Name=WP_000274595.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506508.1;locus_tag=CCO35_RS20850;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274595.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 19205 19867 . + . ID=gene-CCO35_RS20855;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=CCO35_RS20855;old_locus_tag=CCO35_20835 NZ_NPME01000007.1 Protein Homology CDS 19205 19867 . + 0 ID=cds-WP_000424866.1;Parent=gene-CCO35_RS20855;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=CCO35_RS20855;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 19879 20982 . + . ID=gene-CCO35_RS20860;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=CCO35_RS20860;old_locus_tag=CCO35_20840 NZ_NPME01000007.1 Protein Homology CDS 19879 20982 . + 0 ID=cds-WP_000374031.1;Parent=gene-CCO35_RS20860;Dbxref=GenBank:WP_000374031.1;Name=WP_000374031.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=CCO35_RS20860;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374031.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 21089 23269 . - . ID=gene-CCO35_RS20865;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=CCO35_RS20865;old_locus_tag=CCO35_20845 NZ_NPME01000007.1 Protein Homology CDS 21089 23269 . - 0 ID=cds-WP_000108113.1;Parent=gene-CCO35_RS20865;Dbxref=GenBank:WP_000108113.1;Name=WP_000108113.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312898.1;locus_tag=CCO35_RS20865;product=catalase/peroxidase HPI;protein_id=WP_000108113.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 23434 24324 . - . ID=gene-CCO35_RS20870;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=CCO35_RS20870;old_locus_tag=CCO35_20850 NZ_NPME01000007.1 Protein Homology CDS 23434 24324 . - 0 ID=cds-WP_000007507.1;Parent=gene-CCO35_RS20870;Dbxref=GenBank:WP_000007507.1;Name=WP_000007507.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=CCO35_RS20870;product=methylenetetrahydrofolate reductase;protein_id=WP_000007507.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 24519 26075 . - . ID=gene-CCO35_RS20875;Name=CCO35_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20875;old_locus_tag=CCO35_20855 NZ_NPME01000007.1 Protein Homology CDS 24519 26075 . - 0 ID=cds-WP_000865250.1;Parent=gene-CCO35_RS20875;Dbxref=GenBank:WP_000865250.1;Name=WP_000865250.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=CCO35_RS20875;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000865250.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 26211 27335 . + . ID=gene-CCO35_RS20880;Name=CCO35_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20880;old_locus_tag=CCO35_20860 NZ_NPME01000007.1 Protein Homology CDS 26211 27335 . + 0 ID=cds-WP_001134820.1;Parent=gene-CCO35_RS20880;Dbxref=GenBank:WP_001134820.1;Name=WP_001134820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=CCO35_RS20880;product=hypothetical protein;protein_id=WP_001134820.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 27570 28568 . + . ID=gene-CCO35_RS20885;Name=CCO35_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20885;old_locus_tag=CCO35_20865 NZ_NPME01000007.1 Protein Homology CDS 27570 28568 . + 0 ID=cds-WP_023219816.1;Parent=gene-CCO35_RS20885;Dbxref=GenBank:WP_023219816.1;Name=WP_023219816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=CCO35_RS20885;product=hypothetical protein;protein_id=WP_023219816.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 28571 29428 . + . ID=gene-CCO35_RS20890;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=CCO35_RS20890;old_locus_tag=CCO35_20870 NZ_NPME01000007.1 Protein Homology CDS 28571 29428 . + 0 ID=cds-WP_000398243.1;Parent=gene-CCO35_RS20890;Dbxref=GenBank:WP_000398243.1;Name=WP_000398243.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=CCO35_RS20890;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398243.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 29564 31996 . - . ID=gene-CCO35_RS20895;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=CCO35_RS20895;old_locus_tag=CCO35_20875 NZ_NPME01000007.1 Protein Homology CDS 29564 31996 . - 0 ID=cds-WP_001528872.1;Parent=gene-CCO35_RS20895;Dbxref=GenBank:WP_001528872.1;Name=WP_001528872.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=CCO35_RS20895;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_001528872.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 31999 33159 . - . ID=gene-CCO35_RS20900;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=CCO35_RS20900;old_locus_tag=CCO35_20880 NZ_NPME01000007.1 Protein Homology CDS 31999 33159 . - 0 ID=cds-WP_000197212.1;Parent=gene-CCO35_RS20900;Dbxref=GenBank:WP_000197212.1;Name=WP_000197212.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=CCO35_RS20900;product=cystathionine gamma-synthase;protein_id=WP_000197212.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 33424 33741 . + . ID=gene-CCO35_RS20905;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=CCO35_RS20905;old_locus_tag=CCO35_20885 NZ_NPME01000007.1 Protein Homology CDS 33424 33741 . + 0 ID=cds-WP_000852811.1;Parent=gene-CCO35_RS20905;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=CCO35_RS20905;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 34198 35988 . + . ID=gene-CCO35_RS20910;Name=CCO35_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20910;old_locus_tag=CCO35_20890 NZ_NPME01000007.1 Protein Homology CDS 34198 35988 . + 0 ID=cds-WP_094965380.1;Parent=gene-CCO35_RS20910;Dbxref=GenBank:WP_094965380.1;Name=WP_094965380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=CCO35_RS20910;product=aryl-sulfate sulfotransferase;protein_id=WP_094965380.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 36189 36851 . + . ID=gene-CCO35_RS20915;Name=CCO35_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20915;old_locus_tag=CCO35_20895 NZ_NPME01000007.1 Protein Homology CDS 36189 36851 . + 0 ID=cds-WP_000792791.1;Parent=gene-CCO35_RS20915;Dbxref=GenBank:WP_000792791.1;Name=WP_000792791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=CCO35_RS20915;product=TIGR02117 family protein;protein_id=WP_000792791.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 36896 37108 . - . ID=gene-CCO35_RS20920;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=CCO35_RS20920;old_locus_tag=CCO35_20900 NZ_NPME01000007.1 Protein Homology CDS 36896 37108 . - 0 ID=cds-WP_000715284.1;Parent=gene-CCO35_RS20920;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=CCO35_RS20920;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 37312 39510 . + . ID=gene-CCO35_RS20925;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CCO35_RS20925;old_locus_tag=CCO35_20905 NZ_NPME01000007.1 Protein Homology CDS 37312 39510 . + 0 ID=cds-WP_000109376.1;Parent=gene-CCO35_RS20925;Dbxref=GenBank:WP_000109376.1;Name=WP_000109376.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=CCO35_RS20925;product=primosomal protein N';protein_id=WP_000109376.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 39665 40690 . + . ID=gene-CCO35_RS20930;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=CCO35_RS20930;old_locus_tag=CCO35_20910 NZ_NPME01000007.1 Protein Homology CDS 39665 40690 . + 0 ID=cds-WP_000841337.1;Parent=gene-CCO35_RS20930;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=CCO35_RS20930;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 40784 41755 . + . ID=gene-CCO35_RS20935;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=CCO35_RS20935;old_locus_tag=CCO35_20915 NZ_NPME01000007.1 Protein Homology CDS 40784 41755 . + 0 ID=cds-WP_000068814.1;Parent=gene-CCO35_RS20935;Dbxref=GenBank:WP_000068814.1;Name=WP_000068814.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=CCO35_RS20935;product=cell division protein FtsN;protein_id=WP_000068814.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 41847 42377 . + . ID=gene-CCO35_RS20940;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CCO35_RS20940;old_locus_tag=CCO35_20920 NZ_NPME01000007.1 Protein Homology CDS 41847 42377 . + 0 ID=cds-WP_000208240.1;Parent=gene-CCO35_RS20940;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=CCO35_RS20940;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 42387 43718 . + . ID=gene-CCO35_RS20945;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CCO35_RS20945;old_locus_tag=CCO35_20925 NZ_NPME01000007.1 Protein Homology CDS 42387 43718 . + 0 ID=cds-WP_001293360.1;Parent=gene-CCO35_RS20945;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=CCO35_RS20945;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293360.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 43785 44714 . + . ID=gene-CCO35_RS20950;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=CCO35_RS20950;old_locus_tag=CCO35_20930 NZ_NPME01000007.1 Protein Homology CDS 43785 44714 . + 0 ID=cds-WP_000139639.1;Parent=gene-CCO35_RS20950;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=CCO35_RS20950;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 44807 45292 . + . ID=gene-CCO35_RS20955;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=CCO35_RS20955;old_locus_tag=CCO35_20935 NZ_NPME01000007.1 Protein Homology CDS 44807 45292 . + 0 ID=cds-WP_000872918.1;Parent=gene-CCO35_RS20955;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=CCO35_RS20955;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 45514 45753 . - . ID=gene-CCO35_RS20960;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=CCO35_RS20960;old_locus_tag=CCO35_20940 NZ_NPME01000007.1 Protein Homology CDS 45514 45753 . - 0 ID=cds-WP_000051370.1;Parent=gene-CCO35_RS20960;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=CCO35_RS20960;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 46152 46997 . + . ID=gene-CCO35_RS20965;Name=CCO35_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20965;old_locus_tag=CCO35_20945 NZ_NPME01000007.1 Protein Homology CDS 46152 46997 . + 0 ID=cds-WP_000084285.1;Parent=gene-CCO35_RS20965;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=CCO35_RS20965;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 47018 48526 . + . ID=gene-CCO35_RS20970;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CCO35_RS20970;old_locus_tag=CCO35_20950 NZ_NPME01000007.1 Protein Homology CDS 47018 48526 . + 0 ID=cds-WP_001523753.1;Parent=gene-CCO35_RS20970;Dbxref=GenBank:WP_001523753.1;Name=WP_001523753.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=CCO35_RS20970;product=glycerol kinase GlpK;protein_id=WP_001523753.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 48638 49648 . + . ID=gene-CCO35_RS20975;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=CCO35_RS20975;old_locus_tag=CCO35_20955 NZ_NPME01000007.1 Protein Homology CDS 48638 49648 . + 0 ID=cds-WP_001250617.1;Parent=gene-CCO35_RS20975;Dbxref=GenBank:WP_001250617.1;Name=WP_001250617.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=CCO35_RS20975;product=class II fructose-bisphosphatase;protein_id=WP_001250617.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 49745 50491 . + . ID=gene-CCO35_RS20980;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=CCO35_RS20980;old_locus_tag=CCO35_20960 NZ_NPME01000007.1 Protein Homology CDS 49745 50491 . + 0 ID=cds-WP_000796303.1;Parent=gene-CCO35_RS20980;Dbxref=GenBank:WP_000796303.1;Name=WP_000796303.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=CCO35_RS20980;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796303.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 50598 51026 . - . ID=gene-CCO35_RS20985;Name=CCO35_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20985;old_locus_tag=CCO35_20965 NZ_NPME01000007.1 Protein Homology CDS 50598 51026 . - 0 ID=cds-WP_000155237.1;Parent=gene-CCO35_RS20985;Dbxref=GenBank:WP_000155237.1;Name=WP_000155237.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=CCO35_RS20985;product=DUF805 domain-containing protein;protein_id=WP_000155237.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 51127 51723 . + . ID=gene-CCO35_RS20990;Name=CCO35_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS20990;old_locus_tag=CCO35_20970 NZ_NPME01000007.1 Protein Homology CDS 51127 51723 . + 0 ID=cds-WP_000802241.1;Parent=gene-CCO35_RS20990;Dbxref=GenBank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=CCO35_RS20990;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 51836 52603 . + . ID=gene-CCO35_RS20995;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CCO35_RS20995;old_locus_tag=CCO35_20975 NZ_NPME01000007.1 Protein Homology CDS 51836 52603 . + 0 ID=cds-WP_001216336.1;Parent=gene-CCO35_RS20995;Dbxref=GenBank:WP_001216336.1;Name=WP_001216336.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=CCO35_RS20995;product=triose-phosphate isomerase;protein_id=WP_001216336.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 52713 54017 . - . ID=gene-CCO35_RS21000;Name=CCO35_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21000;old_locus_tag=CCO35_20980 NZ_NPME01000007.1 Protein Homology CDS 52713 54017 . - 0 ID=cds-WP_000061007.1;Parent=gene-CCO35_RS21000;Dbxref=GenBank:WP_000061007.1;Name=WP_000061007.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=CCO35_RS21000;product=SLC13 family permease;protein_id=WP_000061007.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 54115 54837 . - . ID=gene-CCO35_RS21005;Name=CCO35_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21005;old_locus_tag=CCO35_20985 NZ_NPME01000007.1 Protein Homology CDS 54115 54837 . - 0 ID=cds-WP_001535809.1;Parent=gene-CCO35_RS21005;Dbxref=GenBank:WP_001535809.1;Name=WP_001535809.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=CCO35_RS21005;product=GntR family transcriptional regulator;protein_id=WP_001535809.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 54900 55940 . - . ID=gene-CCO35_RS21010;Name=CCO35_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21010;old_locus_tag=CCO35_20990 NZ_NPME01000007.1 Protein Homology CDS 54900 55940 . - 0 ID=cds-WP_000557882.1;Parent=gene-CCO35_RS21010;Dbxref=GenBank:WP_000557882.1;Name=WP_000557882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=CCO35_RS21010;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557882.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 55950 56909 . - . ID=gene-CCO35_RS21015;Name=CCO35_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21015;old_locus_tag=CCO35_20995 NZ_NPME01000007.1 Protein Homology CDS 55950 56909 . - 0 ID=cds-WP_031570708.1;Parent=gene-CCO35_RS21015;Dbxref=GenBank:WP_031570708.1;Name=WP_031570708.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=CCO35_RS21015;product=aminoimidazole riboside kinase;protein_id=WP_031570708.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 56920 58254 . - . ID=gene-CCO35_RS21020;Name=CCO35_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21020;old_locus_tag=CCO35_21000 NZ_NPME01000007.1 Protein Homology CDS 56920 58254 . - 0 ID=cds-WP_000777308.1;Parent=gene-CCO35_RS21020;Dbxref=GenBank:WP_000777308.1;Name=WP_000777308.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=CCO35_RS21020;product=MFS transporter;protein_id=WP_000777308.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 58517 59272 . - . ID=gene-CCO35_RS21025;Name=CCO35_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21025;old_locus_tag=CCO35_21005 NZ_NPME01000007.1 Protein Homology CDS 58517 59272 . - 0 ID=cds-WP_000750757.1;Parent=gene-CCO35_RS21025;Dbxref=GenBank:WP_000750757.1;Name=WP_000750757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO35_RS21025;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750757.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 59373 60362 . - . ID=gene-CCO35_RS21030;Name=CCO35_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21030;old_locus_tag=CCO35_21010 NZ_NPME01000007.1 Protein Homology CDS 59373 60362 . - 0 ID=cds-WP_000758706.1;Parent=gene-CCO35_RS21030;Dbxref=GenBank:WP_000758706.1;Name=WP_000758706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=CCO35_RS21030;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758706.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 60566 61528 . - . ID=gene-CCO35_RS21035;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CCO35_RS21035;old_locus_tag=CCO35_21015 NZ_NPME01000007.1 Protein Homology CDS 60566 61528 . - 0 ID=cds-WP_000591793.1;Parent=gene-CCO35_RS21035;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=CCO35_RS21035;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 61713 62615 . - . ID=gene-CCO35_RS21040;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=CCO35_RS21040;old_locus_tag=CCO35_21020 NZ_NPME01000007.1 Protein Homology CDS 61713 62615 . - 0 ID=cds-WP_001077321.1;Parent=gene-CCO35_RS21040;Dbxref=GenBank:WP_001077321.1;Name=WP_001077321.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=CCO35_RS21040;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077321.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 62763 63263 . - . ID=gene-CCO35_RS21045;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=CCO35_RS21045;old_locus_tag=CCO35_21025 NZ_NPME01000007.1 Protein Homology CDS 62763 63263 . - 0 ID=cds-WP_001233463.1;Parent=gene-CCO35_RS21045;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=CCO35_RS21045;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 63414 64112 . + . ID=gene-CCO35_RS21050;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=CCO35_RS21050;old_locus_tag=CCO35_21030 NZ_NPME01000007.1 Protein Homology CDS 63414 64112 . + 0 ID=cds-WP_001033731.1;Parent=gene-CCO35_RS21050;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=CCO35_RS21050;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 64109 65482 . + . ID=gene-CCO35_RS21055;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=CCO35_RS21055;old_locus_tag=CCO35_21035 NZ_NPME01000007.1 Protein Homology CDS 64109 65482 . + 0 ID=cds-WP_000580402.1;Parent=gene-CCO35_RS21055;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=CCO35_RS21055;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 65533 65928 . - . ID=gene-CCO35_RS21060;Name=CCO35_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21060;old_locus_tag=CCO35_21040 NZ_NPME01000007.1 Protein Homology CDS 65533 65928 . - 0 ID=cds-WP_000133441.1;Parent=gene-CCO35_RS21060;Dbxref=GenBank:WP_000133441.1;Name=WP_000133441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=CCO35_RS21060;product=nuclear transport factor 2 family protein;protein_id=WP_000133441.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 65940 66629 . - . ID=gene-CCO35_RS21065;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=CCO35_RS21065;old_locus_tag=CCO35_21045 NZ_NPME01000007.1 Protein Homology CDS 65940 66629 . - 0 ID=cds-WP_000559227.1;Parent=gene-CCO35_RS21065;Dbxref=GenBank:WP_000559227.1;Name=WP_000559227.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=CCO35_RS21065;product=6-hydroxyaminopurine reductase;protein_id=WP_000559227.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 66699 67319 . - . ID=gene-CCO35_RS21070;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=CCO35_RS21070;old_locus_tag=CCO35_21050 NZ_NPME01000007.1 Protein Homology CDS 66699 67319 . - 0 ID=cds-WP_000122628.1;Parent=gene-CCO35_RS21070;Dbxref=GenBank:WP_000122628.1;Name=WP_000122628.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=CCO35_RS21070;product=superoxide dismutase [Mn];protein_id=WP_000122628.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 67648 68631 . + . ID=gene-CCO35_RS21075;Name=CCO35_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21075;old_locus_tag=CCO35_21055 NZ_NPME01000007.1 Protein Homology CDS 67648 68631 . + 0 ID=cds-WP_000812816.1;Parent=gene-CCO35_RS21075;Dbxref=GenBank:WP_000812816.1;Name=WP_000812816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=CCO35_RS21075;product=TRAP transporter substrate-binding protein;protein_id=WP_000812816.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 68650 69165 . + . ID=gene-CCO35_RS21080;Name=CCO35_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21080;old_locus_tag=CCO35_21060 NZ_NPME01000007.1 Protein Homology CDS 68650 69165 . + 0 ID=cds-WP_001091413.1;Parent=gene-CCO35_RS21080;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=CCO35_RS21080;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 69158 70465 . + . ID=gene-CCO35_RS21085;Name=CCO35_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21085;old_locus_tag=CCO35_21065 NZ_NPME01000007.1 Protein Homology CDS 69158 70465 . + 0 ID=cds-WP_000566800.1;Parent=gene-CCO35_RS21085;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=CCO35_RS21085;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 70623 71306 . - . ID=gene-CCO35_RS21090;Name=CCO35_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21090;old_locus_tag=CCO35_21070 NZ_NPME01000007.1 Protein Homology CDS 70623 71306 . - 0 ID=cds-WP_000378721.1;Parent=gene-CCO35_RS21090;Dbxref=GenBank:WP_000378721.1;Name=WP_000378721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=CCO35_RS21090;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378721.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 71925 72959 . + . ID=gene-CCO35_RS21095;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=CCO35_RS21095;old_locus_tag=CCO35_21075 NZ_NPME01000007.1 Protein Homology CDS 71925 72959 . + 0 ID=cds-WP_000063541.1;Parent=gene-CCO35_RS21095;Dbxref=GenBank:WP_000063541.1;Name=WP_000063541.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=CCO35_RS21095;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063541.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 72956 73804 . - . ID=gene-CCO35_RS21100;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=CCO35_RS21100;old_locus_tag=CCO35_21080 NZ_NPME01000007.1 Protein Homology CDS 72956 73804 . - 0 ID=cds-WP_000013296.1;Parent=gene-CCO35_RS21100;Dbxref=GenBank:WP_000013296.1;Name=WP_000013296.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=CCO35_RS21100;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013296.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 73957 74793 . - . ID=gene-CCO35_RS21105;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=CCO35_RS21105;old_locus_tag=CCO35_21085 NZ_NPME01000007.1 Protein Homology CDS 73957 74793 . - 0 ID=cds-WP_000217116.1;Parent=gene-CCO35_RS21105;Dbxref=GenBank:WP_000217116.1;Name=WP_000217116.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=CCO35_RS21105;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217116.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 75081 76550 . + . ID=gene-CCO35_RS21110;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=CCO35_RS21110;old_locus_tag=CCO35_21090 NZ_NPME01000007.1 Protein Homology CDS 75081 76550 . + 0 ID=cds-WP_000143979.1;Parent=gene-CCO35_RS21110;Dbxref=GenBank:WP_000143979.1;Name=WP_000143979.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=CCO35_RS21110;product=rhamnulokinase;protein_id=WP_000143979.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 76547 77806 . + . ID=gene-CCO35_RS21115;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=CCO35_RS21115;old_locus_tag=CCO35_21095 NZ_NPME01000007.1 Protein Homology CDS 76547 77806 . + 0 ID=cds-WP_000211473.1;Parent=gene-CCO35_RS21115;Dbxref=GenBank:WP_000211473.1;Name=WP_000211473.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=CCO35_RS21115;product=L-rhamnose isomerase;protein_id=WP_000211473.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 77949 78776 . + . ID=gene-CCO35_RS21120;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=CCO35_RS21120;old_locus_tag=CCO35_21100 NZ_NPME01000007.1 Protein Homology CDS 77949 78776 . + 0 ID=cds-WP_001179696.1;Parent=gene-CCO35_RS21120;Dbxref=GenBank:WP_001179696.1;Name=WP_001179696.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=CCO35_RS21120;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179696.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 78902 80050 . + . ID=gene-CCO35_RS21125;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO35_RS21125;old_locus_tag=CCO35_21105 NZ_NPME01000007.1 Protein Homology CDS 78902 80050 . + 0 ID=cds-WP_000009253.1;Parent=gene-CCO35_RS21125;Dbxref=GenBank:WP_000009253.1;Name=WP_000009253.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=CCO35_RS21125;product=lactaldehyde reductase;protein_id=WP_000009253.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 80047 80361 . + . ID=gene-CCO35_RS21130;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=CCO35_RS21130;old_locus_tag=CCO35_21110 NZ_NPME01000007.1 Protein Homology CDS 80047 80361 . + 0 ID=cds-WP_000619478.1;Parent=gene-CCO35_RS21130;Dbxref=GenBank:WP_000619478.1;Name=WP_000619478.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=CCO35_RS21130;product=L-rhamnose mutarotase;protein_id=WP_000619478.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 80450 80998 . - . ID=gene-CCO35_RS21135;Name=CCO35_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21135;old_locus_tag=CCO35_21115 NZ_NPME01000007.1 Protein Homology CDS 80450 80998 . - 0 ID=cds-WP_001517951.1;Parent=gene-CCO35_RS21135;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=CCO35_RS21135;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 81099 81758 . + . ID=gene-CCO35_RS21140;Name=CCO35_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21140;old_locus_tag=CCO35_21120 NZ_NPME01000007.1 Protein Homology CDS 81099 81758 . + 0 ID=cds-WP_000683586.1;Parent=gene-CCO35_RS21140;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=CCO35_RS21140;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 81758 82081 . + . ID=gene-CCO35_RS21145;Name=CCO35_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21145;old_locus_tag=CCO35_21125 NZ_NPME01000007.1 Protein Homology CDS 81758 82081 . + 0 ID=cds-WP_000527677.1;Parent=gene-CCO35_RS21145;Dbxref=GenBank:WP_000527677.1;Name=WP_000527677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=CCO35_RS21145;product=AzlD domain-containing protein;protein_id=WP_000527677.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 82437 83537 . - . ID=gene-CCO35_RS21150;Name=CCO35_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21150;old_locus_tag=CCO35_21130 NZ_NPME01000007.1 Protein Homology CDS 82437 83537 . - 0 ID=cds-WP_031570680.1;Parent=gene-CCO35_RS21150;Dbxref=GenBank:WP_031570680.1;Name=WP_031570680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=CCO35_RS21150;product=YiiG family protein;protein_id=WP_031570680.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 83730 84566 . - . ID=gene-CCO35_RS21155;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CCO35_RS21155;old_locus_tag=CCO35_21135 NZ_NPME01000007.1 Protein Homology CDS 83730 84566 . - 0 ID=cds-WP_001059735.1;Parent=gene-CCO35_RS21155;Dbxref=GenBank:WP_001059735.1;Name=WP_001059735.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=CCO35_RS21155;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059735.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 84761 87811 . + . ID=gene-CCO35_RS21165;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO35_RS21165;old_locus_tag=CCO35_21145 NZ_NPME01000007.1 Protein Homology CDS 84761 87811 . + 0 ID=cds-WP_077248424.1;Parent=gene-CCO35_RS21165;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=CCO35_RS21165;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:85346..85348%2Caa:Sec);transl_table=11 NZ_NPME01000007.1 RefSeq gene 87824 88726 . + . ID=gene-CCO35_RS21170;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO35_RS21170;old_locus_tag=CCO35_21150 NZ_NPME01000007.1 Protein Homology CDS 87824 88726 . + 0 ID=cds-WP_000331361.1;Parent=gene-CCO35_RS21170;Dbxref=GenBank:WP_000331361.1;Name=WP_000331361.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=CCO35_RS21170;product=formate dehydrogenase subunit beta;protein_id=WP_000331361.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 88723 89358 . + . ID=gene-CCO35_RS21175;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=CCO35_RS21175;old_locus_tag=CCO35_21155 NZ_NPME01000007.1 Protein Homology CDS 88723 89358 . + 0 ID=cds-WP_000829025.1;Parent=gene-CCO35_RS21175;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=CCO35_RS21175;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 89355 90284 . + . ID=gene-CCO35_RS21180;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=CCO35_RS21180;old_locus_tag=CCO35_21160 NZ_NPME01000007.1 Protein Homology CDS 89355 90284 . + 0 ID=cds-WP_000027730.1;Parent=gene-CCO35_RS21180;Dbxref=GenBank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=CCO35_RS21180;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 90331 90621 . - . ID=gene-CCO35_RS21185;Name=CCO35_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21185;old_locus_tag=CCO35_21165 NZ_NPME01000007.1 Protein Homology CDS 90331 90621 . - 0 ID=cds-WP_000362050.1;Parent=gene-CCO35_RS21185;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=CCO35_RS21185;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 90622 90933 . - . ID=gene-CCO35_RS21190;Name=CCO35_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21190;old_locus_tag=CCO35_21170 NZ_NPME01000007.1 Protein Homology CDS 90622 90933 . - 0 ID=cds-WP_001159631.1;Parent=gene-CCO35_RS21190;Dbxref=GenBank:WP_001159631.1;Name=WP_001159631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=CCO35_RS21190;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159631.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 91151 92080 . + . ID=gene-CCO35_RS21195;Name=CCO35_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21195;old_locus_tag=CCO35_21175 NZ_NPME01000007.1 Protein Homology CDS 91151 92080 . + 0 ID=cds-WP_001127698.1;Parent=gene-CCO35_RS21195;Dbxref=GenBank:WP_001127698.1;Name=WP_001127698.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=CCO35_RS21195;product=alpha/beta hydrolase;protein_id=WP_001127698.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 92166 92477 . + . ID=gene-CCO35_RS21200;Name=CCO35_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21200;old_locus_tag=CCO35_21180 NZ_NPME01000007.1 Protein Homology CDS 92166 92477 . + 0 ID=cds-WP_000558166.1;Parent=gene-CCO35_RS21200;Dbxref=GenBank:WP_000558166.1;Name=WP_000558166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=CCO35_RS21200;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558166.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 92474 92920 . + . ID=gene-CCO35_RS21205;Name=CCO35_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21205;old_locus_tag=CCO35_21185 NZ_NPME01000007.1 Protein Homology CDS 92474 92920 . + 0 ID=cds-WP_001259009.1;Parent=gene-CCO35_RS21205;Dbxref=GenBank:WP_001259009.1;Name=WP_001259009.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=CCO35_RS21205;product=helix-turn-helix domain-containing protein;protein_id=WP_001259009.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 92935 93876 . - . ID=gene-CCO35_RS21210;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=CCO35_RS21210;old_locus_tag=CCO35_21190 NZ_NPME01000007.1 Protein Homology CDS 92935 93876 . - 0 ID=cds-WP_001518251.1;Parent=gene-CCO35_RS21210;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=CCO35_RS21210;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 93921 94358 . - . ID=gene-CCO35_RS21215;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CCO35_RS21215;old_locus_tag=CCO35_21195 NZ_NPME01000007.1 Protein Homology CDS 93921 94358 . - 0 ID=cds-WP_000560969.1;Parent=gene-CCO35_RS21215;Dbxref=GenBank:WP_000560969.1;Name=WP_000560969.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=CCO35_RS21215;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560969.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 94355 95227 . - . ID=gene-CCO35_RS21220;Name=CCO35_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21220;old_locus_tag=CCO35_21200 NZ_NPME01000007.1 Protein Homology CDS 94355 95227 . - 0 ID=cds-WP_000921423.1;Parent=gene-CCO35_RS21220;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=CCO35_RS21220;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 95221 95820 . - . ID=gene-CCO35_RS21225;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=CCO35_RS21225;old_locus_tag=CCO35_21205 NZ_NPME01000007.1 Protein Homology CDS 95221 95820 . - 0 ID=cds-WP_000965695.1;Parent=gene-CCO35_RS21225;Dbxref=GenBank:WP_000965695.1;Name=WP_000965695.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=CCO35_RS21225;product=glucose-1-phosphatase;protein_id=WP_000965695.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 96011 96814 . - . ID=gene-CCO35_RS21230;Name=CCO35_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21230;old_locus_tag=CCO35_21210 NZ_NPME01000007.1 Protein Homology CDS 96011 96814 . - 0 ID=cds-WP_000059693.1;Parent=gene-CCO35_RS21230;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=CCO35_RS21230;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 96848 97744 . - . ID=gene-CCO35_RS21235;Name=CCO35_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21235;old_locus_tag=CCO35_21215 NZ_NPME01000007.1 Protein Homology CDS 96848 97744 . - 0 ID=cds-WP_001636271.1;Parent=gene-CCO35_RS21235;Dbxref=GenBank:WP_001636271.1;Name=WP_001636271.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=CCO35_RS21235;product=sugar kinase;protein_id=WP_001636271.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 97909 98805 . + . ID=gene-CCO35_RS21240;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=CCO35_RS21240;old_locus_tag=CCO35_21220 NZ_NPME01000007.1 Protein Homology CDS 97909 98805 . + 0 ID=cds-WP_000268248.1;Parent=gene-CCO35_RS21240;Dbxref=GenBank:WP_000268248.1;Name=WP_000268248.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=CCO35_RS21240;product=sulfolactaldehyde 3-reductase;protein_id=WP_000268248.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 98828 99706 . + . ID=gene-CCO35_RS21245;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=CCO35_RS21245;old_locus_tag=CCO35_21225 NZ_NPME01000007.1 Protein Homology CDS 98828 99706 . + 0 ID=cds-WP_001067413.1;Parent=gene-CCO35_RS21245;Dbxref=GenBank:WP_001067413.1;Name=WP_001067413.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=CCO35_RS21245;product=sulfofructosephosphate aldolase;protein_id=WP_001067413.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 99722 100963 . + . ID=gene-CCO35_RS21250;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=CCO35_RS21250;old_locus_tag=CCO35_21230 NZ_NPME01000007.1 Protein Homology CDS 99722 100963 . + 0 ID=cds-WP_000870942.1;Parent=gene-CCO35_RS21250;Dbxref=GenBank:WP_000870942.1;Name=WP_000870942.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=CCO35_RS21250;product=sulfoquinovose isomerase;protein_id=WP_000870942.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 100967 101824 . + . ID=gene-CCO35_RS21255;Name=CCO35_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21255;old_locus_tag=CCO35_21235 NZ_NPME01000007.1 Protein Homology CDS 100967 101824 . + 0 ID=cds-WP_024146284.1;Parent=gene-CCO35_RS21255;Dbxref=GenBank:WP_024146284.1;Name=WP_024146284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=CCO35_RS21255;product=aldose-1-epimerase;protein_id=WP_024146284.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 101868 103904 . + . ID=gene-CCO35_RS21260;Name=CCO35_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21260;old_locus_tag=CCO35_21240 NZ_NPME01000007.1 Protein Homology CDS 101868 103904 . + 0 ID=cds-WP_001631552.1;Parent=gene-CCO35_RS21260;Dbxref=GenBank:WP_001631552.1;Name=WP_001631552.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=CCO35_RS21260;product=alpha-glucosidase;protein_id=WP_001631552.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 103950 105332 . + . ID=gene-CCO35_RS21265;Name=CCO35_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21265;old_locus_tag=CCO35_21245 NZ_NPME01000007.1 Protein Homology CDS 103950 105332 . + 0 ID=cds-WP_000084250.1;Parent=gene-CCO35_RS21265;Dbxref=GenBank:WP_000084250.1;Name=WP_000084250.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=CCO35_RS21265;product=MFS transporter;protein_id=WP_000084250.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 105378 106799 . + . ID=gene-CCO35_RS21270;Name=CCO35_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21270;old_locus_tag=CCO35_21250 NZ_NPME01000007.1 Protein Homology CDS 105378 106799 . + 0 ID=cds-WP_000064888.1;Parent=gene-CCO35_RS21270;Dbxref=GenBank:WP_000064888.1;Name=WP_000064888.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=CCO35_RS21270;product=MFS transporter;protein_id=WP_000064888.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 106867 107559 . + . ID=gene-CCO35_RS21275;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=CCO35_RS21275;old_locus_tag=CCO35_21255 NZ_NPME01000007.1 Protein Homology CDS 106867 107559 . + 0 ID=cds-WP_000838829.1;Parent=gene-CCO35_RS21275;Dbxref=GenBank:WP_000838829.1;Name=WP_000838829.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=CCO35_RS21275;product=porin OmpL;protein_id=WP_000838829.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 107716 108564 . + . ID=gene-CCO35_RS21280;Name=CCO35_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21280;old_locus_tag=CCO35_21260 NZ_NPME01000007.1 Protein Homology CDS 107716 108564 . + 0 ID=cds-WP_001042077.1;Parent=gene-CCO35_RS21280;Dbxref=GenBank:WP_001042077.1;Name=WP_001042077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=CCO35_RS21280;product=STM4015 family protein;protein_id=WP_001042077.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 108577 109602 . + . ID=gene-CCO35_RS21285;Name=CCO35_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21285;old_locus_tag=CCO35_21265 NZ_NPME01000007.1 Protein Homology CDS 108577 109602 . + 0 ID=cds-WP_077916041.1;Parent=gene-CCO35_RS21285;Dbxref=GenBank:WP_077916041.1;Name=WP_077916041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=CCO35_RS21285;product=STM4014 family protein;protein_id=WP_077916041.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 109595 110470 . + . ID=gene-CCO35_RS21290;Name=CCO35_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21290;old_locus_tag=CCO35_21270 NZ_NPME01000007.1 Protein Homology CDS 109595 110470 . + 0 ID=cds-WP_000282804.1;Parent=gene-CCO35_RS21290;Dbxref=GenBank:WP_000282804.1;Name=WP_000282804.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=CCO35_RS21290;product=STM4013/SEN3800 family hydrolase;protein_id=WP_000282804.1;transl_table=11 NZ_NPME01000007.1 RefSeq pseudogene 110472 111712 . + . ID=gene-CCO35_RS21295;Name=CCO35_RS21295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS21295;old_locus_tag=CCO35_21275;pseudo=true NZ_NPME01000007.1 Protein Homology CDS 110472 111712 . + 0 ID=cds-CCO35_RS21295;Parent=gene-CCO35_RS21295;Note=frameshifted;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=CCO35_RS21295;product=STM4012 family radical SAM protein;pseudo=true;transl_table=11 NZ_NPME01000007.1 RefSeq gene 111709 112587 . + . ID=gene-CCO35_RS21300;Name=CCO35_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21300;old_locus_tag=CCO35_21280 NZ_NPME01000007.1 Protein Homology CDS 111709 112587 . + 0 ID=cds-WP_001530741.1;Parent=gene-CCO35_RS21300;Dbxref=GenBank:WP_001530741.1;Name=WP_001530741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=CCO35_RS21300;product=STM4011 family radical SAM protein;protein_id=WP_001530741.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 112572 113306 . + . ID=gene-CCO35_RS21305;Name=CCO35_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21305;old_locus_tag=CCO35_21285 NZ_NPME01000007.1 Protein Homology CDS 112572 113306 . + 0 ID=cds-WP_001270582.1;Parent=gene-CCO35_RS21305;Dbxref=GenBank:WP_001270582.1;Name=WP_001270582.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=CCO35_RS21305;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_001270582.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 113361 115184 . - . ID=gene-CCO35_RS21310;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CCO35_RS21310;old_locus_tag=CCO35_21290 NZ_NPME01000007.1 Protein Homology CDS 113361 115184 . - 0 ID=cds-WP_000572060.1;Parent=gene-CCO35_RS21310;Dbxref=GenBank:WP_000572060.1;Name=WP_000572060.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=CCO35_RS21310;product=ribosome-dependent GTPase TypA;protein_id=WP_000572060.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 115560 116969 . + . ID=gene-CCO35_RS21320;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CCO35_RS21320;old_locus_tag=CCO35_21300 NZ_NPME01000007.1 Protein Homology CDS 115560 116969 . + 0 ID=cds-WP_001271699.1;Parent=gene-CCO35_RS21320;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=CCO35_RS21320;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 117244 118293 . + . ID=gene-CCO35_RS21330;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=CCO35_RS21330;old_locus_tag=CCO35_21310 NZ_NPME01000007.1 Protein Homology CDS 117244 118293 . + 0 ID=cds-WP_000146192.1;Parent=gene-CCO35_RS21330;Dbxref=GenBank:WP_000146192.1;Name=WP_000146192.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=CCO35_RS21330;product=nitrogen regulation protein NR(II);protein_id=WP_000146192.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 118302 119711 . + . ID=gene-CCO35_RS21335;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=CCO35_RS21335;old_locus_tag=CCO35_21315 NZ_NPME01000007.1 Protein Homology CDS 118302 119711 . + 0 ID=cds-WP_001188781.1;Parent=gene-CCO35_RS21335;Dbxref=GenBank:WP_001188781.1;Name=WP_001188781.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=CCO35_RS21335;product=nitrogen regulation protein NR(I);protein_id=WP_001188781.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 119824 119934 . + . ID=gene-CCO35_RS21340;Name=CCO35_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21340;old_locus_tag=CCO35_21320 NZ_NPME01000007.1 Protein Homology CDS 119824 119934 . + 0 ID=cds-WP_001578131.1;Parent=gene-CCO35_RS21340;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=CCO35_RS21340;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 120024 121397 . - . ID=gene-CCO35_RS21345;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=CCO35_RS21345;old_locus_tag=CCO35_21325 NZ_NPME01000007.1 Protein Homology CDS 120024 121397 . - 0 ID=cds-WP_000003520.1;Parent=gene-CCO35_RS21345;Dbxref=GenBank:WP_000003520.1;Name=WP_000003520.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=CCO35_RS21345;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003520.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 121586 122101 . - . ID=gene-CCO35_RS21350;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=CCO35_RS21350;old_locus_tag=CCO35_21330 NZ_NPME01000007.1 Protein Homology CDS 121586 122101 . - 0 ID=cds-WP_000743297.1;Parent=gene-CCO35_RS21350;Dbxref=GenBank:WP_000743297.1;Name=WP_000743297.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=CCO35_RS21350;product=Der GTPase-activating protein YihI;protein_id=WP_000743297.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 122220 122444 . - . ID=gene-CCO35_RS21355;Name=CCO35_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21355;old_locus_tag=CCO35_21335 NZ_NPME01000007.1 Protein Homology CDS 122220 122444 . - 0 ID=cds-WP_001541209.1;Parent=gene-CCO35_RS21355;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=CCO35_RS21355;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 122683 123315 . + . ID=gene-CCO35_RS21360;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CCO35_RS21360;old_locus_tag=CCO35_21340 NZ_NPME01000007.1 Protein Homology CDS 122683 123315 . + 0 ID=cds-WP_000183327.1;Parent=gene-CCO35_RS21360;Dbxref=GenBank:WP_000183327.1;Name=WP_000183327.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=CCO35_RS21360;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183327.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 123649 126435 . - . ID=gene-CCO35_RS21365;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CCO35_RS21365;old_locus_tag=CCO35_21345 NZ_NPME01000007.1 Protein Homology CDS 123649 126435 . - 0 ID=cds-WP_000249960.1;Parent=gene-CCO35_RS21365;Dbxref=GenBank:WP_000249960.1;Name=WP_000249960.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=CCO35_RS21365;product=DNA polymerase I;protein_id=WP_000249960.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 126823 127731 . + . ID=gene-CCO35_RS21375;Name=CCO35_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21375;old_locus_tag=CCO35_21355 NZ_NPME01000007.1 Protein Homology CDS 126823 127731 . + 0 ID=cds-WP_000196900.1;Parent=gene-CCO35_RS21375;Dbxref=GenBank:WP_000196900.1;Name=WP_000196900.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=CCO35_RS21375;product=acyltransferase;protein_id=WP_000196900.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 127744 128367 . - . ID=gene-CCO35_RS21380;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=CCO35_RS21380;old_locus_tag=CCO35_21360 NZ_NPME01000007.1 Protein Homology CDS 127744 128367 . - 0 ID=cds-WP_000725364.1;Parent=gene-CCO35_RS21380;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=CCO35_RS21380;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 128384 129370 . - . ID=gene-CCO35_RS21385;Name=CCO35_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21385;old_locus_tag=CCO35_21365 NZ_NPME01000007.1 Protein Homology CDS 128384 129370 . - 0 ID=cds-WP_000999260.1;Parent=gene-CCO35_RS21385;Dbxref=GenBank:WP_000999260.1;Name=WP_000999260.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=CCO35_RS21385;product=serine/threonine protein kinase;protein_id=WP_000999260.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 129447 129716 . - . ID=gene-CCO35_RS21390;Name=CCO35_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21390;old_locus_tag=CCO35_21370 NZ_NPME01000007.1 Protein Homology CDS 129447 129716 . - 0 ID=cds-WP_000649858.1;Parent=gene-CCO35_RS21390;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=CCO35_RS21390;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 129786 130370 . + . ID=gene-CCO35_RS21395;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CCO35_RS21395;old_locus_tag=CCO35_21375 NZ_NPME01000007.1 Protein Homology CDS 129786 130370 . + 0 ID=cds-WP_001046880.1;Parent=gene-CCO35_RS21395;Dbxref=GenBank:WP_001046880.1;Name=WP_001046880.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=CCO35_RS21395;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001046880.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 130367 130882 . + . ID=gene-CCO35_RS21400;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CCO35_RS21400;old_locus_tag=CCO35_21380 NZ_NPME01000007.1 Protein Homology CDS 130367 130882 . + 0 ID=cds-WP_076167072.1;Parent=gene-CCO35_RS21400;Dbxref=GenBank:WP_076167072.1;Name=WP_076167072.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=CCO35_RS21400;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_076167072.1;transl_table=11 NZ_NPME01000007.1 RefSeq gene 131186 131301 . - . ID=gene-CCO35_RS21410;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO35_RS21410;old_locus_tag=CCO35_21390 NZ_NPME01000007.1 cmsearch rRNA 131186 131301 . - . ID=rna-CCO35_RS21410;Parent=gene-CCO35_RS21410;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21410;product=5S ribosomal RNA NZ_NPME01000007.1 cmsearch exon 131186 131301 . - . ID=exon-CCO35_RS21410-1;Parent=rna-CCO35_RS21410;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21410;product=5S ribosomal RNA NZ_NPME01000007.1 RefSeq gene 131499 131601 . - . ID=gene-CCO35_RS21415;Name=CCO35_RS21415;end_range=131601,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS21415;old_locus_tag=CCO35_21395;partial=true NZ_NPME01000007.1 cmsearch rRNA 131499 131601 . - . ID=rna-CCO35_RS21415;Parent=gene-CCO35_RS21415;Dbxref=RFAM:RF02541;end_range=131601,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21415;partial=true;product=23S ribosomal RNA NZ_NPME01000007.1 cmsearch exon 131499 131601 . - . ID=exon-CCO35_RS21415-1;Parent=rna-CCO35_RS21415;Dbxref=RFAM:RF02541;end_range=131601,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21415;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPME01000008.1 1 105912 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000008.1 RefSeq region 1 105912 . + . ID=NZ_NPME01000008.1:1..105912;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000008.1 RefSeq gene 1 103 . + . ID=gene-CCO35_RS21420;Name=CCO35_RS21420;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS21420;old_locus_tag=CCO35_21400;partial=true;start_range=.,1 NZ_NPME01000008.1 cmsearch rRNA 1 103 . + . ID=rna-CCO35_RS21420;Parent=gene-CCO35_RS21420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21420;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPME01000008.1 cmsearch exon 1 103 . + . ID=exon-CCO35_RS21420-1;Parent=rna-CCO35_RS21420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21420;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPME01000008.1 RefSeq gene 301 416 . + . ID=gene-CCO35_RS21425;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO35_RS21425;old_locus_tag=CCO35_21405 NZ_NPME01000008.1 cmsearch rRNA 301 416 . + . ID=rna-CCO35_RS21425;Parent=gene-CCO35_RS21425;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21425;product=5S ribosomal RNA NZ_NPME01000008.1 cmsearch exon 301 416 . + . ID=exon-CCO35_RS21425-1;Parent=rna-CCO35_RS21425;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21425;product=5S ribosomal RNA NZ_NPME01000008.1 RefSeq gene 431 506 . + . ID=gene-CCO35_RS21430;Name=CCO35_RS21430;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS21430;old_locus_tag=CCO35_21410 NZ_NPME01000008.1 tRNAscan-SE tRNA 431 506 . + . ID=rna-CCO35_RS21430;Parent=gene-CCO35_RS21430;anticodon=(pos:464..466);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS21430;product=tRNA-Thr NZ_NPME01000008.1 tRNAscan-SE exon 431 506 . + . ID=exon-CCO35_RS21430-1;Parent=rna-CCO35_RS21430;anticodon=(pos:464..466);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS21430;product=tRNA-Thr NZ_NPME01000008.1 RefSeq gene 546 661 . + . ID=gene-CCO35_RS21435;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO35_RS21435;old_locus_tag=CCO35_21415 NZ_NPME01000008.1 cmsearch rRNA 546 661 . + . ID=rna-CCO35_RS21435;Parent=gene-CCO35_RS21435;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21435;product=5S ribosomal RNA NZ_NPME01000008.1 cmsearch exon 546 661 . + . ID=exon-CCO35_RS21435-1;Parent=rna-CCO35_RS21435;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21435;product=5S ribosomal RNA NZ_NPME01000008.1 RefSeq gene 1658 1879 . - . ID=gene-CCO35_RS21445;Name=CCO35_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21445;old_locus_tag=CCO35_21425 NZ_NPME01000008.1 Protein Homology CDS 1658 1879 . - 0 ID=cds-WP_000825645.1;Parent=gene-CCO35_RS21445;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=CCO35_RS21445;product=membrane protein;protein_id=WP_000825645.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 2117 5230 . - . ID=gene-CCO35_RS21450;Name=CCO35_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21450;old_locus_tag=CCO35_21430 NZ_NPME01000008.1 Protein Homology CDS 2117 5230 . - 0 ID=cds-WP_094965381.1;Parent=gene-CCO35_RS21450;Dbxref=GenBank:WP_094965381.1;Name=WP_094965381.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=CCO35_RS21450;product=efflux RND transporter permease subunit;protein_id=WP_094965381.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 5242 6399 . - . ID=gene-CCO35_RS21455;Name=CCO35_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21455;old_locus_tag=CCO35_21435 NZ_NPME01000008.1 Protein Homology CDS 5242 6399 . - 0 ID=cds-WP_001529294.1;Parent=gene-CCO35_RS21455;Dbxref=GenBank:WP_001529294.1;Name=WP_001529294.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=CCO35_RS21455;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001529294.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 6813 7475 . + . ID=gene-CCO35_RS21460;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=CCO35_RS21460;old_locus_tag=CCO35_21440 NZ_NPME01000008.1 Protein Homology CDS 6813 7475 . + 0 ID=cds-WP_001085725.1;Parent=gene-CCO35_RS21460;Dbxref=GenBank:WP_001085725.1;Name=WP_001085725.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=CCO35_RS21460;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085725.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 7478 9577 . - . ID=gene-CCO35_RS21465;Name=CCO35_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21465;old_locus_tag=CCO35_21445 NZ_NPME01000008.1 Protein Homology CDS 7478 9577 . - 0 ID=cds-WP_031571397.1;Parent=gene-CCO35_RS21465;Dbxref=GenBank:WP_031571397.1;Name=WP_031571397.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=CCO35_RS21465;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_031571397.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 9728 9892 . - . ID=gene-CCO35_RS21470;Name=CCO35_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21470;old_locus_tag=CCO35_21450 NZ_NPME01000008.1 Protein Homology CDS 9728 9892 . - 0 ID=cds-WP_000620015.1;Parent=gene-CCO35_RS21470;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=CCO35_RS21470;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 9975 10859 . - . ID=gene-CCO35_RS21475;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=CCO35_RS21475;old_locus_tag=CCO35_21455 NZ_NPME01000008.1 Protein Homology CDS 9975 10859 . - 0 ID=cds-WP_000642611.1;Parent=gene-CCO35_RS21475;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=CCO35_RS21475;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 10945 11241 . - . ID=gene-CCO35_RS21480;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=CCO35_RS21480;old_locus_tag=CCO35_21460 NZ_NPME01000008.1 Protein Homology CDS 10945 11241 . - 0 ID=cds-WP_000462905.1;Parent=gene-CCO35_RS21480;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=CCO35_RS21480;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 11267 12232 . - . ID=gene-CCO35_RS21485;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CCO35_RS21485;old_locus_tag=CCO35_21465 NZ_NPME01000008.1 Protein Homology CDS 11267 12232 . - 0 ID=cds-WP_031571386.1;Parent=gene-CCO35_RS21485;Dbxref=GenBank:WP_031571386.1;Name=WP_031571386.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=CCO35_RS21485;product=tRNA dihydrouridine synthase DusB;protein_id=WP_031571386.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 12893 13774 . - . ID=gene-CCO35_RS21490;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CCO35_RS21490;old_locus_tag=CCO35_21470 NZ_NPME01000008.1 Protein Homology CDS 12893 13774 . - 0 ID=cds-WP_001145843.1;Parent=gene-CCO35_RS21490;Dbxref=GenBank:WP_001145843.1;Name=WP_001145843.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=CCO35_RS21490;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145843.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 13786 15237 . - . ID=gene-CCO35_RS21495;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=CCO35_RS21495;old_locus_tag=CCO35_21475 NZ_NPME01000008.1 Protein Homology CDS 13786 15237 . - 0 ID=cds-WP_001175749.1;Parent=gene-CCO35_RS21495;Dbxref=GenBank:WP_001175749.1;Name=WP_001175749.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=CCO35_RS21495;product=sodium/pantothenate symporter;protein_id=WP_001175749.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 15227 15469 . - . ID=gene-CCO35_RS21500;Name=CCO35_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21500;old_locus_tag=CCO35_21480 NZ_NPME01000008.1 Protein Homology CDS 15227 15469 . - 0 ID=cds-WP_031571384.1;Parent=gene-CCO35_RS21500;Dbxref=GenBank:WP_031571384.1;Name=WP_031571384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=CCO35_RS21500;product=YhdT family protein;protein_id=WP_031571384.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 15578 16927 . - . ID=gene-CCO35_RS21505;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CCO35_RS21505;old_locus_tag=CCO35_21485 NZ_NPME01000008.1 Protein Homology CDS 15578 16927 . - 0 ID=cds-WP_000884627.1;Parent=gene-CCO35_RS21505;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=CCO35_RS21505;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 16938 17408 . - . ID=gene-CCO35_RS21510;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CCO35_RS21510;old_locus_tag=CCO35_21490 NZ_NPME01000008.1 Protein Homology CDS 16938 17408 . - 0 ID=cds-WP_000354628.1;Parent=gene-CCO35_RS21510;Dbxref=GenBank:WP_000354628.1;Name=WP_000354628.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=CCO35_RS21510;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354628.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 17801 18400 . - . ID=gene-CCO35_RS21515;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=CCO35_RS21515;old_locus_tag=CCO35_21495 NZ_NPME01000008.1 Protein Homology CDS 17801 18400 . - 0 ID=cds-WP_001240053.1;Parent=gene-CCO35_RS21515;Dbxref=GenBank:WP_001240053.1;Name=WP_001240053.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=CCO35_RS21515;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240053.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 18401 19405 . - . ID=gene-CCO35_RS21520;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=CCO35_RS21520;old_locus_tag=CCO35_21500 NZ_NPME01000008.1 Protein Homology CDS 18401 19405 . - 0 ID=cds-WP_000723876.1;Parent=gene-CCO35_RS21520;Dbxref=GenBank:WP_000723876.1;Name=WP_000723876.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=CCO35_RS21520;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 19518 20492 . - . ID=gene-CCO35_RS21525;Name=CCO35_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21525;old_locus_tag=CCO35_21505 NZ_NPME01000008.1 Protein Homology CDS 19518 20492 . - 0 ID=cds-WP_001148254.1;Parent=gene-CCO35_RS21525;Dbxref=GenBank:WP_001148254.1;Name=WP_001148254.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=CCO35_RS21525;product=MDR family oxidoreductase;protein_id=WP_001148254.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 20696 22636 . + . ID=gene-CCO35_RS21530;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=CCO35_RS21530;old_locus_tag=CCO35_21510 NZ_NPME01000008.1 Protein Homology CDS 20696 22636 . + 0 ID=cds-WP_001241372.1;Parent=gene-CCO35_RS21530;Dbxref=GenBank:WP_001241372.1;Name=WP_001241372.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=CCO35_RS21530;product=RNase E specificity factor CsrD;protein_id=WP_001241372.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 22944 23987 . + . ID=gene-CCO35_RS21545;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=CCO35_RS21545;old_locus_tag=CCO35_21525 NZ_NPME01000008.1 Protein Homology CDS 22944 23987 . + 0 ID=cds-WP_000913396.1;Parent=gene-CCO35_RS21545;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=CCO35_RS21545;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 24052 25104 . + . ID=gene-CCO35_RS21550;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CCO35_RS21550;old_locus_tag=CCO35_21530 NZ_NPME01000008.1 Protein Homology CDS 24052 25104 . + 0 ID=cds-WP_000802538.1;Parent=gene-CCO35_RS21550;Dbxref=GenBank:WP_000802538.1;Name=WP_000802538.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=CCO35_RS21550;product=rod shape-determining protein MreC;protein_id=WP_000802538.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 25107 25595 . + . ID=gene-CCO35_RS21555;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CCO35_RS21555;old_locus_tag=CCO35_21535 NZ_NPME01000008.1 Protein Homology CDS 25107 25595 . + 0 ID=cds-WP_000179403.1;Parent=gene-CCO35_RS21555;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=CCO35_RS21555;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 25604 26197 . + . ID=gene-CCO35_RS21560;Name=CCO35_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21560;old_locus_tag=CCO35_21540 NZ_NPME01000008.1 Protein Homology CDS 25604 26197 . + 0 ID=cds-WP_000210306.1;Parent=gene-CCO35_RS21560;Dbxref=GenBank:WP_000210306.1;Name=WP_000210306.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=CCO35_RS21560;product=Maf family protein;protein_id=WP_000210306.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 26187 27656 . + . ID=gene-CCO35_RS21565;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=CCO35_RS21565;old_locus_tag=CCO35_21545 NZ_NPME01000008.1 Protein Homology CDS 26187 27656 . + 0 ID=cds-WP_000123188.1;Parent=gene-CCO35_RS21565;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=CCO35_RS21565;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 27760 31560 . + . ID=gene-CCO35_RS21570;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=CCO35_RS21570;old_locus_tag=CCO35_21550 NZ_NPME01000008.1 Protein Homology CDS 27760 31560 . + 0 ID=cds-WP_001253511.1;Parent=gene-CCO35_RS21570;Dbxref=GenBank:WP_001253511.1;Name=WP_001253511.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=CCO35_RS21570;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253511.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 31705 33150 . + . ID=gene-CCO35_RS21575;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=CCO35_RS21575;old_locus_tag=CCO35_21555 NZ_NPME01000008.1 Protein Homology CDS 31705 33150 . + 0 ID=cds-WP_000055936.1;Parent=gene-CCO35_RS21575;Dbxref=GenBank:WP_000055936.1;Name=WP_000055936.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=CCO35_RS21575;product=metalloprotease TldD;protein_id=WP_000055936.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 33272 34201 . - . ID=gene-CCO35_RS21580;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=CCO35_RS21580;old_locus_tag=CCO35_21560 NZ_NPME01000008.1 Protein Homology CDS 33272 34201 . - 0 ID=cds-WP_000440300.1;Parent=gene-CCO35_RS21580;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=CCO35_RS21580;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 34383 34586 . + . ID=gene-CCO35_RS21585;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=CCO35_RS21585;old_locus_tag=CCO35_21565 NZ_NPME01000008.1 Protein Homology CDS 34383 34586 . + 0 ID=cds-WP_000051840.1;Parent=gene-CCO35_RS21585;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=CCO35_RS21585;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 34594 35526 . + . ID=gene-CCO35_RS21590;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=CCO35_RS21590;old_locus_tag=CCO35_21570 NZ_NPME01000008.1 Protein Homology CDS 34594 35526 . + 0 ID=cds-WP_000855138.1;Parent=gene-CCO35_RS21590;Dbxref=GenBank:WP_000855138.1;Name=WP_000855138.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=CCO35_RS21590;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855138.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 35532 37499 . + . ID=gene-CCO35_RS21595;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=CCO35_RS21595;old_locus_tag=CCO35_21575 NZ_NPME01000008.1 Protein Homology CDS 35532 37499 . + 0 ID=cds-WP_000510913.1;Parent=gene-CCO35_RS21595;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=CCO35_RS21595;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 37671 37943 . + . ID=gene-CCO35_RS21600;Name=CCO35_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21600;old_locus_tag=CCO35_21580 NZ_NPME01000008.1 Protein Homology CDS 37671 37943 . + 0 ID=cds-WP_001103888.1;Parent=gene-CCO35_RS21600;Dbxref=GenBank:WP_001103888.1;Name=WP_001103888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=CCO35_RS21600;product=barstar family protein;protein_id=WP_001103888.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 38003 38269 . - . ID=gene-CCO35_RS21605;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=CCO35_RS21605;old_locus_tag=CCO35_21585 NZ_NPME01000008.1 Protein Homology CDS 38003 38269 . - 0 ID=cds-WP_000853277.1;Parent=gene-CCO35_RS21605;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=CCO35_RS21605;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 38373 38636 . - . ID=gene-CCO35_RS21610;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=CCO35_RS21610;old_locus_tag=CCO35_21590 NZ_NPME01000008.1 Protein Homology CDS 38373 38636 . - 0 ID=cds-WP_000695695.1;Parent=gene-CCO35_RS21610;Dbxref=GenBank:WP_000695695.1;Name=WP_000695695.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=CCO35_RS21610;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695695.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 39001 39471 . - . ID=gene-CCO35_RS21615;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=CCO35_RS21615;old_locus_tag=CCO35_21595 NZ_NPME01000008.1 Protein Homology CDS 39001 39471 . - 0 ID=cds-WP_001257852.1;Parent=gene-CCO35_RS21615;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=CCO35_RS21615;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 39886 40824 . + . ID=gene-CCO35_RS21620;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CCO35_RS21620;old_locus_tag=CCO35_21600 NZ_NPME01000008.1 Protein Homology CDS 39886 40824 . + 0 ID=cds-WP_000861586.1;Parent=gene-CCO35_RS21620;Dbxref=GenBank:WP_000861586.1;Name=WP_000861586.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=CCO35_RS21620;product=malate dehydrogenase;protein_id=WP_000861586.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 40944 41573 . + . ID=gene-CCO35_RS21625;Name=CCO35_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21625;old_locus_tag=CCO35_21605 NZ_NPME01000008.1 Protein Homology CDS 40944 41573 . + 0 ID=cds-WP_000723776.1;Parent=gene-CCO35_RS21625;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=CCO35_RS21625;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 41560 42225 . + . ID=gene-CCO35_RS21630;Name=CCO35_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21630;old_locus_tag=CCO35_21610 NZ_NPME01000008.1 Protein Homology CDS 41560 42225 . + 0 ID=cds-WP_001171581.1;Parent=gene-CCO35_RS21630;Dbxref=GenBank:WP_001171581.1;Name=WP_001171581.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=CCO35_RS21630;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11 NZ_NPME01000008.1 RefSeq pseudogene 42436 43703 . + . ID=gene-CCO35_RS21635;Name=CCO35_RS21635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS21635;old_locus_tag=CCO35_21615;pseudo=true NZ_NPME01000008.1 Protein Homology CDS 42436 43703 . + 0 ID=cds-CCO35_RS21635;Parent=gene-CCO35_RS21635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=CCO35_RS21635;product=SLC13 family permease;pseudo=true;transl_table=11 NZ_NPME01000008.1 RefSeq gene 43736 44635 . + . ID=gene-CCO35_RS21640;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=CCO35_RS21640;old_locus_tag=CCO35_21620 NZ_NPME01000008.1 Protein Homology CDS 43736 44635 . + 0 ID=cds-WP_000045349.1;Parent=gene-CCO35_RS21640;Dbxref=GenBank:WP_000045349.1;Name=WP_000045349.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=CCO35_RS21640;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 44635 45252 . + . ID=gene-CCO35_RS21645;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=CCO35_RS21645;old_locus_tag=CCO35_21625 NZ_NPME01000008.1 Protein Homology CDS 44635 45252 . + 0 ID=cds-WP_000162405.1;Parent=gene-CCO35_RS21645;Dbxref=GenBank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=CCO35_RS21645;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 45409 45657 . + . ID=gene-CCO35_RS21650;Name=CCO35_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21650;old_locus_tag=CCO35_21630 NZ_NPME01000008.1 Protein Homology CDS 45409 45657 . + 0 ID=cds-WP_023230912.1;Parent=gene-CCO35_RS21650;Dbxref=GenBank:WP_023230912.1;Name=WP_023230912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=CCO35_RS21650;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_023230912.1;transl_table=11 NZ_NPME01000008.1 RefSeq pseudogene 45673 47448 . + . ID=gene-CCO35_RS21655;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=pseudogene;locus_tag=CCO35_RS21655;old_locus_tag=CCO35_21635;pseudo=true NZ_NPME01000008.1 Protein Homology CDS 45673 47448 . + 0 ID=cds-CCO35_RS21655;Parent=gene-CCO35_RS21655;Note=internal stop;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO35_RS21655;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;transl_table=11 NZ_NPME01000008.1 RefSeq gene 47464 48765 . + . ID=gene-CCO35_RS21660;Name=CCO35_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21660;old_locus_tag=CCO35_21640 NZ_NPME01000008.1 Protein Homology CDS 47464 48765 . + 0 ID=cds-WP_023230910.1;Parent=gene-CCO35_RS21660;Dbxref=GenBank:WP_023230910.1;Name=WP_023230910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO35_RS21660;product=oxalacetate decarboxylase subunit beta;protein_id=WP_023230910.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 48785 49516 . + . ID=gene-CCO35_RS21665;Name=CCO35_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21665;old_locus_tag=CCO35_21645 NZ_NPME01000008.1 Protein Homology CDS 48785 49516 . + 0 ID=cds-WP_000602022.1;Parent=gene-CCO35_RS21665;Dbxref=GenBank:WP_000602022.1;Name=WP_000602022.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=CCO35_RS21665;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_000602022.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 49550 50620 . - . ID=gene-CCO35_RS21670;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=CCO35_RS21670;old_locus_tag=CCO35_21650 NZ_NPME01000008.1 Protein Homology CDS 49550 50620 . - 0 ID=cds-WP_000497705.1;Parent=gene-CCO35_RS21670;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=CCO35_RS21670;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 50713 52080 . - . ID=gene-CCO35_RS21675;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=CCO35_RS21675;old_locus_tag=CCO35_21655 NZ_NPME01000008.1 Protein Homology CDS 50713 52080 . - 0 ID=cds-WP_000716690.1;Parent=gene-CCO35_RS21675;Dbxref=GenBank:WP_000716690.1;Name=WP_000716690.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=CCO35_RS21675;product=serine endoprotease DegQ;protein_id=WP_000716690.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 52237 52635 . - . ID=gene-CCO35_RS21680;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=CCO35_RS21680;old_locus_tag=CCO35_21660 NZ_NPME01000008.1 Protein Homology CDS 52237 52635 . - 0 ID=cds-WP_001519074.1;Parent=gene-CCO35_RS21680;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=CCO35_RS21680;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 52828 53952 . + . ID=gene-CCO35_RS21685;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=CCO35_RS21685;old_locus_tag=CCO35_21665 NZ_NPME01000008.1 Protein Homology CDS 52828 53952 . + 0 ID=cds-WP_023181583.1;Parent=gene-CCO35_RS21685;Dbxref=GenBank:WP_023181583.1;Name=WP_023181583.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=CCO35_RS21685;product=cell division protein ZapE;protein_id=WP_023181583.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 54254 54682 . + . ID=gene-CCO35_RS21690;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CCO35_RS21690;old_locus_tag=CCO35_21670 NZ_NPME01000008.1 Protein Homology CDS 54254 54682 . + 0 ID=cds-WP_000847559.1;Parent=gene-CCO35_RS21690;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=CCO35_RS21690;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 54698 55090 . + . ID=gene-CCO35_RS21695;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CCO35_RS21695;old_locus_tag=CCO35_21675 NZ_NPME01000008.1 Protein Homology CDS 54698 55090 . + 0 ID=cds-WP_000829815.1;Parent=gene-CCO35_RS21695;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=CCO35_RS21695;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 55289 56041 . + . ID=gene-CCO35_RS21700;Name=CCO35_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21700;old_locus_tag=CCO35_21680 NZ_NPME01000008.1 Protein Homology CDS 55289 56041 . + 0 ID=cds-WP_077906029.1;Parent=gene-CCO35_RS21700;Dbxref=GenBank:WP_077906029.1;Name=WP_077906029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=CCO35_RS21700;product=DUF695 domain-containing protein;protein_id=WP_077906029.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 56304 56942 . + . ID=gene-CCO35_RS21705;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=CCO35_RS21705;old_locus_tag=CCO35_21685 NZ_NPME01000008.1 Protein Homology CDS 56304 56942 . + 0 ID=cds-WP_000257298.1;Parent=gene-CCO35_RS21705;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=CCO35_RS21705;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 56948 57448 . + . ID=gene-CCO35_RS21710;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=CCO35_RS21710;old_locus_tag=CCO35_21690 NZ_NPME01000008.1 Protein Homology CDS 56948 57448 . + 0 ID=cds-WP_000366112.1;Parent=gene-CCO35_RS21710;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=CCO35_RS21710;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 57557 58348 . + . ID=gene-CCO35_RS21715;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=CCO35_RS21715;old_locus_tag=CCO35_21695 NZ_NPME01000008.1 Protein Homology CDS 57557 58348 . + 0 ID=cds-WP_000382923.1;Parent=gene-CCO35_RS21715;Dbxref=GenBank:WP_000382923.1;Name=WP_000382923.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=CCO35_RS21715;product=transcriptional regulator NanR;protein_id=WP_000382923.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 58483 59376 . + . ID=gene-CCO35_RS21720;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=CCO35_RS21720;old_locus_tag=CCO35_21700 NZ_NPME01000008.1 Protein Homology CDS 58483 59376 . + 0 ID=cds-WP_001029667.1;Parent=gene-CCO35_RS21720;Dbxref=GenBank:WP_001029667.1;Name=WP_001029667.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=CCO35_RS21720;product=N-acetylneuraminate lyase;protein_id=WP_001029667.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 59492 60982 . + . ID=gene-CCO35_RS21725;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=CCO35_RS21725;old_locus_tag=CCO35_21705 NZ_NPME01000008.1 Protein Homology CDS 59492 60982 . + 0 ID=cds-WP_000108071.1;Parent=gene-CCO35_RS21725;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=CCO35_RS21725;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 61029 61718 . + . ID=gene-CCO35_RS21730;Name=CCO35_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21730;old_locus_tag=CCO35_21710 NZ_NPME01000008.1 Protein Homology CDS 61029 61718 . + 0 ID=cds-WP_000054449.1;Parent=gene-CCO35_RS21730;Dbxref=GenBank:WP_000054449.1;Name=WP_000054449.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=CCO35_RS21730;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054449.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 61715 62590 . + . ID=gene-CCO35_RS21735;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=CCO35_RS21735;old_locus_tag=CCO35_21715 NZ_NPME01000008.1 Protein Homology CDS 61715 62590 . + 0 ID=cds-WP_000208969.1;Parent=gene-CCO35_RS21735;Dbxref=GenBank:WP_000208969.1;Name=WP_000208969.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=CCO35_RS21735;product=N-acetylmannosamine kinase;protein_id=WP_000208969.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 62587 63054 . + . ID=gene-CCO35_RS21740;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=CCO35_RS21740;old_locus_tag=CCO35_21720 NZ_NPME01000008.1 Protein Homology CDS 62587 63054 . + 0 ID=cds-WP_031566880.1;Parent=gene-CCO35_RS21740;Dbxref=GenBank:WP_031566880.1;Name=WP_031566880.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=CCO35_RS21740;product=N-acetylneuraminate anomerase;protein_id=WP_031566880.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 63136 64416 . - . ID=gene-CCO35_RS21745;Name=CCO35_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21745;old_locus_tag=CCO35_21725 NZ_NPME01000008.1 Protein Homology CDS 63136 64416 . - 0 ID=cds-WP_031566877.1;Parent=gene-CCO35_RS21745;Dbxref=GenBank:WP_031566877.1;Name=WP_031566877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=CCO35_RS21745;product=cytosine deaminase;protein_id=WP_031566877.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 64403 65656 . - . ID=gene-CCO35_RS21750;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=CCO35_RS21750;old_locus_tag=CCO35_21730 NZ_NPME01000008.1 Protein Homology CDS 64403 65656 . - 0 ID=cds-WP_031566874.1;Parent=gene-CCO35_RS21750;Dbxref=GenBank:WP_031566874.1;Name=WP_031566874.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=CCO35_RS21750;product=cytosine permease;protein_id=WP_031566874.1;transl_table=11 NZ_NPME01000008.1 RefSeq pseudogene 65772 66875 . - . ID=gene-CCO35_RS21755;Name=CCO35_RS21755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO35_RS21755;old_locus_tag=CCO35_21735;pseudo=true NZ_NPME01000008.1 Protein Homology CDS 65772 66875 . - 0 ID=cds-CCO35_RS21755;Parent=gene-CCO35_RS21755;Note=internal stop;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=CCO35_RS21755;product=PDDEXK nuclease domain-containing protein;pseudo=true;transl_table=11 NZ_NPME01000008.1 RefSeq gene 67083 68501 . - . ID=gene-CCO35_RS21760;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=CCO35_RS21760;old_locus_tag=CCO35_21740 NZ_NPME01000008.1 Protein Homology CDS 67083 68501 . - 0 ID=cds-WP_000081633.1;Parent=gene-CCO35_RS21760;Dbxref=GenBank:WP_000081633.1;Name=WP_000081633.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=CCO35_RS21760;product=glutamate synthase subunit GltD;protein_id=WP_000081633.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 68511 72971 . - . ID=gene-CCO35_RS21765;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CCO35_RS21765;old_locus_tag=CCO35_21745 NZ_NPME01000008.1 Protein Homology CDS 68511 72971 . - 0 ID=cds-WP_015406273.1;Parent=gene-CCO35_RS21765;Dbxref=GenBank:WP_015406273.1;Name=WP_015406273.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=CCO35_RS21765;product=glutamate synthase large subunit;protein_id=WP_015406273.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 73643 74572 . + . ID=gene-CCO35_RS21775;Name=CCO35_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21775;old_locus_tag=CCO35_21755 NZ_NPME01000008.1 Protein Homology CDS 73643 74572 . + 0 ID=cds-WP_001176888.1;Parent=gene-CCO35_RS21775;Dbxref=GenBank:WP_001176888.1;Name=WP_001176888.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=CCO35_RS21775;product=TIGR01212 family radical SAM protein;protein_id=WP_001176888.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 74666 77002 . + . ID=gene-CCO35_RS21780;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=CCO35_RS21780;old_locus_tag=CCO35_21760 NZ_NPME01000008.1 Protein Homology CDS 74666 77002 . + 0 ID=cds-WP_000809807.1;Parent=gene-CCO35_RS21780;Dbxref=GenBank:WP_000809807.1;Name=WP_000809807.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=CCO35_RS21780;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809807.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 77229 77882 . + . ID=gene-CCO35_RS21785;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=CCO35_RS21785;old_locus_tag=CCO35_21765 NZ_NPME01000008.1 Protein Homology CDS 77229 77882 . + 0 ID=cds-WP_000719811.1;Parent=gene-CCO35_RS21785;Dbxref=GenBank:WP_000719811.1;Name=WP_000719811.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=CCO35_RS21785;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719811.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 77879 78607 . + . ID=gene-CCO35_RS21790;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=CCO35_RS21790;old_locus_tag=CCO35_21770 NZ_NPME01000008.1 Protein Homology CDS 77879 78607 . + 0 ID=cds-WP_000044653.1;Parent=gene-CCO35_RS21790;Dbxref=GenBank:WP_000044653.1;Name=WP_000044653.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=CCO35_RS21790;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044653.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 78682 79314 . - . ID=gene-CCO35_RS21795;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=CCO35_RS21795;old_locus_tag=CCO35_21775 NZ_NPME01000008.1 Protein Homology CDS 78682 79314 . - 0 ID=cds-WP_000576805.1;Parent=gene-CCO35_RS21795;Dbxref=GenBank:WP_000576805.1;Name=WP_000576805.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=CCO35_RS21795;product=PhoP regulatory network protein YrbL;protein_id=WP_000576805.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 79561 79833 . - . ID=gene-CCO35_RS21805;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=CCO35_RS21805;old_locus_tag=CCO35_21785 NZ_NPME01000008.1 Protein Homology CDS 79561 79833 . - 0 ID=cds-WP_000216797.1;Parent=gene-CCO35_RS21805;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=CCO35_RS21805;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 79830 80684 . - . ID=gene-CCO35_RS21810;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CCO35_RS21810;old_locus_tag=CCO35_21790 NZ_NPME01000008.1 Protein Homology CDS 79830 80684 . - 0 ID=cds-WP_000243749.1;Parent=gene-CCO35_RS21810;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=CCO35_RS21810;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 80730 81221 . - . ID=gene-CCO35_RS21815;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=CCO35_RS21815;old_locus_tag=CCO35_21795 NZ_NPME01000008.1 Protein Homology CDS 80730 81221 . - 0 ID=cds-WP_000609332.1;Parent=gene-CCO35_RS21815;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=CCO35_RS21815;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 81339 81626 . - . ID=gene-CCO35_RS21820;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CCO35_RS21820;old_locus_tag=CCO35_21800 NZ_NPME01000008.1 Protein Homology CDS 81339 81626 . - 0 ID=cds-WP_001176589.1;Parent=gene-CCO35_RS21820;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=CCO35_RS21820;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 81649 83082 . - . ID=gene-CCO35_RS21825;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=CCO35_RS21825;old_locus_tag=CCO35_21805 NZ_NPME01000008.1 Protein Homology CDS 81649 83082 . - 0 ID=cds-WP_000809020.1;Parent=gene-CCO35_RS21825;Dbxref=GenBank:WP_000809020.1;Name=WP_000809020.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=CCO35_RS21825;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 83130 83855 . - . ID=gene-CCO35_RS21830;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=CCO35_RS21830;old_locus_tag=CCO35_21810 NZ_NPME01000008.1 Protein Homology CDS 83130 83855 . - 0 ID=cds-WP_000224104.1;Parent=gene-CCO35_RS21830;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=CCO35_RS21830;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 83862 84416 . - . ID=gene-CCO35_RS21835;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=CCO35_RS21835;old_locus_tag=CCO35_21815 NZ_NPME01000008.1 Protein Homology CDS 83862 84416 . - 0 ID=cds-WP_000669770.1;Parent=gene-CCO35_RS21835;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=CCO35_RS21835;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 84385 84960 . - . ID=gene-CCO35_RS21840;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=CCO35_RS21840;old_locus_tag=CCO35_21820 NZ_NPME01000008.1 Protein Homology CDS 84385 84960 . - 0 ID=cds-WP_000047845.1;Parent=gene-CCO35_RS21840;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=CCO35_RS21840;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 84957 85523 . - . ID=gene-CCO35_RS21845;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=CCO35_RS21845;old_locus_tag=CCO35_21825 NZ_NPME01000008.1 Protein Homology CDS 84957 85523 . - 0 ID=cds-WP_000030029.1;Parent=gene-CCO35_RS21845;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=CCO35_RS21845;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 85544 86530 . - . ID=gene-CCO35_RS21850;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=CCO35_RS21850;old_locus_tag=CCO35_21830 NZ_NPME01000008.1 Protein Homology CDS 85544 86530 . - 0 ID=cds-WP_000018613.1;Parent=gene-CCO35_RS21850;Dbxref=GenBank:WP_000018613.1;Name=WP_000018613.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=CCO35_RS21850;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018613.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 86544 87521 . - . ID=gene-CCO35_RS21855;Name=CCO35_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21855;old_locus_tag=CCO35_21835 NZ_NPME01000008.1 Protein Homology CDS 86544 87521 . - 0 ID=cds-WP_000922736.1;Parent=gene-CCO35_RS21855;Dbxref=GenBank:WP_000922736.1;Name=WP_000922736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=CCO35_RS21855;product=calcium/sodium antiporter;protein_id=WP_000922736.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 87734 88546 . + . ID=gene-CCO35_RS21860;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=CCO35_RS21860;old_locus_tag=CCO35_21840 NZ_NPME01000008.1 Protein Homology CDS 87734 88546 . + 0 ID=cds-WP_000531566.1;Parent=gene-CCO35_RS21860;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=CCO35_RS21860;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 88554 89336 . + . ID=gene-CCO35_RS21865;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=CCO35_RS21865;old_locus_tag=CCO35_21845 NZ_NPME01000008.1 Protein Homology CDS 88554 89336 . + 0 ID=cds-WP_000925786.1;Parent=gene-CCO35_RS21865;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=CCO35_RS21865;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 89341 89892 . + . ID=gene-CCO35_RS21870;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=CCO35_RS21870;old_locus_tag=CCO35_21850 NZ_NPME01000008.1 Protein Homology CDS 89341 89892 . + 0 ID=cds-WP_001193591.1;Parent=gene-CCO35_RS21870;Dbxref=GenBank:WP_001193591.1;Name=WP_001193591.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=CCO35_RS21870;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193591.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 89911 90546 . + . ID=gene-CCO35_RS21875;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=CCO35_RS21875;old_locus_tag=CCO35_21855 NZ_NPME01000008.1 Protein Homology CDS 89911 90546 . + 0 ID=cds-WP_000476475.1;Parent=gene-CCO35_RS21875;Dbxref=GenBank:WP_000476475.1;Name=WP_000476475.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=CCO35_RS21875;product=phospholipid-binding protein MlaC;protein_id=WP_000476475.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 90546 90842 . + . ID=gene-CCO35_RS21880;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=CCO35_RS21880;old_locus_tag=CCO35_21860 NZ_NPME01000008.1 Protein Homology CDS 90546 90842 . + 0 ID=cds-WP_000188844.1;Parent=gene-CCO35_RS21880;Dbxref=GenBank:WP_000188844.1;Name=WP_000188844.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=CCO35_RS21880;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188844.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 91030 91284 . + . ID=gene-CCO35_RS21885;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=CCO35_RS21885;old_locus_tag=CCO35_21865 NZ_NPME01000008.1 Protein Homology CDS 91030 91284 . + 0 ID=cds-WP_001518349.1;Parent=gene-CCO35_RS21885;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=CCO35_RS21885;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 91338 92597 . + . ID=gene-CCO35_RS21890;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CCO35_RS21890;old_locus_tag=CCO35_21870 NZ_NPME01000008.1 Protein Homology CDS 91338 92597 . + 0 ID=cds-WP_000357288.1;Parent=gene-CCO35_RS21890;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=CCO35_RS21890;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 92655 92942 . - . ID=gene-CCO35_RS21895;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=CCO35_RS21895;old_locus_tag=CCO35_21875 NZ_NPME01000008.1 Protein Homology CDS 92655 92942 . - 0 ID=cds-WP_000444168.1;Parent=gene-CCO35_RS21895;Dbxref=GenBank:WP_000444168.1;Name=WP_000444168.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=CCO35_RS21895;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444168.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 93175 94146 . - . ID=gene-CCO35_RS21900;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=CCO35_RS21900;old_locus_tag=CCO35_21880 NZ_NPME01000008.1 Protein Homology CDS 93175 94146 . - 0 ID=cds-WP_001047353.1;Parent=gene-CCO35_RS21900;Dbxref=GenBank:WP_001047353.1;Name=WP_001047353.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229036.1;locus_tag=CCO35_RS21900;product=octaprenyl diphosphate synthase;protein_id=WP_001047353.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 94404 94715 . + . ID=gene-CCO35_RS21905;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CCO35_RS21905;old_locus_tag=CCO35_21885 NZ_NPME01000008.1 Protein Homology CDS 94404 94715 . + 0 ID=cds-WP_000271398.1;Parent=gene-CCO35_RS21905;Dbxref=GenBank:WP_000271398.1;Name=WP_000271398.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=CCO35_RS21905;product=50S ribosomal protein L21;protein_id=WP_000271398.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 94735 94992 . + . ID=gene-CCO35_RS21910;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CCO35_RS21910;old_locus_tag=CCO35_21890 NZ_NPME01000008.1 Protein Homology CDS 94735 94992 . + 0 ID=cds-WP_000940593.1;Parent=gene-CCO35_RS21910;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=CCO35_RS21910;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 95122 96087 . + . ID=gene-CCO35_RS21915;Name=CCO35_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS21915;old_locus_tag=CCO35_21895 NZ_NPME01000008.1 Protein Homology CDS 95122 96087 . + 0 ID=cds-WP_000813052.1;Parent=gene-CCO35_RS21915;Dbxref=GenBank:WP_000813052.1;Name=WP_000813052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=CCO35_RS21915;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 96103 97275 . + . ID=gene-CCO35_RS21920;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=CCO35_RS21920;old_locus_tag=CCO35_21900 NZ_NPME01000008.1 Protein Homology CDS 96103 97275 . + 0 ID=cds-WP_000673556.1;Parent=gene-CCO35_RS21920;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=CCO35_RS21920;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 97406 98839 . - . ID=gene-CCO35_RS21925;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=CCO35_RS21925;old_locus_tag=CCO35_21905 NZ_NPME01000008.1 Protein Homology CDS 97406 98839 . - 0 ID=cds-WP_001212675.1;Parent=gene-CCO35_RS21925;Dbxref=GenBank:WP_001212675.1;Name=WP_001212675.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=CCO35_RS21925;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212675.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 99087 99563 . + . ID=gene-CCO35_RS21930;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CCO35_RS21930;old_locus_tag=CCO35_21910 NZ_NPME01000008.1 Protein Homology CDS 99087 99563 . + 0 ID=cds-WP_001148008.1;Parent=gene-CCO35_RS21930;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=CCO35_RS21930;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 99719 100012 . - . ID=gene-CCO35_RS21935;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CCO35_RS21935;old_locus_tag=CCO35_21915 NZ_NPME01000008.1 Protein Homology CDS 99719 100012 . - 0 ID=cds-WP_001592995.1;Parent=gene-CCO35_RS21935;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=CCO35_RS21935;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 100139 100765 . + . ID=gene-CCO35_RS21940;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=CCO35_RS21940;old_locus_tag=CCO35_21920 NZ_NPME01000008.1 Protein Homology CDS 100139 100765 . + 0 ID=cds-WP_000145974.1;Parent=gene-CCO35_RS21940;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=CCO35_RS21940;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 100869 102803 . + . ID=gene-CCO35_RS21950;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=CCO35_RS21950;old_locus_tag=CCO35_21930 NZ_NPME01000008.1 Protein Homology CDS 100869 102803 . + 0 ID=cds-WP_001107481.1;Parent=gene-CCO35_RS21950;Dbxref=GenBank:WP_001107481.1;Name=WP_001107481.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=CCO35_RS21950;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 102907 103755 . + . ID=gene-CCO35_RS21955;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CCO35_RS21955;old_locus_tag=CCO35_21935 NZ_NPME01000008.1 Protein Homology CDS 102907 103755 . + 0 ID=cds-WP_000764711.1;Parent=gene-CCO35_RS21955;Dbxref=GenBank:WP_000764711.1;Name=WP_000764711.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=CCO35_RS21955;product=dihydropteroate synthase;protein_id=WP_000764711.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 103748 105085 . + . ID=gene-CCO35_RS21960;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CCO35_RS21960;old_locus_tag=CCO35_21940 NZ_NPME01000008.1 Protein Homology CDS 103748 105085 . + 0 ID=cds-WP_000071171.1;Parent=gene-CCO35_RS21960;Dbxref=GenBank:WP_000071171.1;Name=WP_000071171.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=CCO35_RS21960;product=phosphoglucosamine mutase;protein_id=WP_000071171.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 105308 105640 . + . ID=gene-CCO35_RS21965;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CCO35_RS21965;old_locus_tag=CCO35_21945 NZ_NPME01000008.1 Protein Homology CDS 105308 105640 . + 0 ID=cds-WP_000272680.1;Parent=gene-CCO35_RS21965;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=CCO35_RS21965;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11 NZ_NPME01000008.1 RefSeq gene 105654 105740 . + . ID=gene-CCO35_RS21970;Name=CCO35_RS21970;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS21970;old_locus_tag=CCO35_21950 NZ_NPME01000008.1 tRNAscan-SE tRNA 105654 105740 . + . ID=rna-CCO35_RS21970;Parent=gene-CCO35_RS21970;anticodon=(pos:105688..105690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS21970;product=tRNA-Leu NZ_NPME01000008.1 tRNAscan-SE exon 105654 105740 . + . ID=exon-CCO35_RS21970-1;Parent=rna-CCO35_RS21970;anticodon=(pos:105688..105690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS21970;product=tRNA-Leu ##sequence-region NZ_NPME01000009.1 1 93597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46626 NZ_NPME01000009.1 RefSeq region 1 93597 . + . ID=NZ_NPME01000009.1:1..93597;Dbxref=taxon:46626;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Give;strain=CFSAN059885;sub-species=enterica NZ_NPME01000009.1 RefSeq gene 1 115 . + . ID=gene-CCO35_RS21975;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO35_RS21975;old_locus_tag=CCO35_21955 NZ_NPME01000009.1 cmsearch rRNA 1 115 . + . ID=rna-CCO35_RS21975;Parent=gene-CCO35_RS21975;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21975;product=5S ribosomal RNA NZ_NPME01000009.1 cmsearch exon 1 115 . + . ID=exon-CCO35_RS21975-1;Parent=rna-CCO35_RS21975;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS21975;product=5S ribosomal RNA NZ_NPME01000009.1 RefSeq gene 169 245 . + . ID=gene-CCO35_RS21980;Name=CCO35_RS21980;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS21980;old_locus_tag=CCO35_21960 NZ_NPME01000009.1 tRNAscan-SE tRNA 169 245 . + . ID=rna-CCO35_RS21980;Parent=gene-CCO35_RS21980;anticodon=(pos:203..205);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS21980;product=tRNA-Asp NZ_NPME01000009.1 tRNAscan-SE exon 169 245 . + . ID=exon-CCO35_RS21980-1;Parent=rna-CCO35_RS21980;anticodon=(pos:203..205);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS21980;product=tRNA-Asp NZ_NPME01000009.1 RefSeq gene 254 329 . + . ID=gene-CCO35_RS21985;Name=CCO35_RS21985;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS21985;old_locus_tag=CCO35_21965 NZ_NPME01000009.1 tRNAscan-SE tRNA 254 329 . + . ID=rna-CCO35_RS21985;Parent=gene-CCO35_RS21985;anticodon=(pos:287..289);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS21985;product=tRNA-Trp NZ_NPME01000009.1 tRNAscan-SE exon 254 329 . + . ID=exon-CCO35_RS21985-1;Parent=rna-CCO35_RS21985;anticodon=(pos:287..289);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS21985;product=tRNA-Trp NZ_NPME01000009.1 RefSeq gene 430 1278 . - . ID=gene-CCO35_RS21990;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=CCO35_RS21990;old_locus_tag=CCO35_21970 NZ_NPME01000009.1 Protein Homology CDS 430 1278 . - 0 ID=cds-WP_001657826.1;Parent=gene-CCO35_RS21990;Dbxref=GenBank:WP_001657826.1;Name=WP_001657826.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=CCO35_RS21990;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001657826.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 1385 1723 . + . ID=gene-CCO35_RS21995;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=CCO35_RS21995;old_locus_tag=CCO35_21975 NZ_NPME01000009.1 Protein Homology CDS 1385 1723 . + 0 ID=cds-WP_000840996.1;Parent=gene-CCO35_RS21995;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=CCO35_RS21995;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 1748 3268 . - . ID=gene-CCO35_RS22000;Name=CCO35_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22000;old_locus_tag=CCO35_21980 NZ_NPME01000009.1 Protein Homology CDS 1748 3268 . - 0 ID=cds-WP_000050210.1;Parent=gene-CCO35_RS22000;Dbxref=GenBank:WP_000050210.1;Name=WP_000050210.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=CCO35_RS22000;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000050210.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 3619 3717 . + . ID=gene-CCO35_RS22005;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=CCO35_RS22005;old_locus_tag=CCO35_21985 NZ_NPME01000009.1 Protein Homology CDS 3619 3717 . + 0 ID=cds-WP_001311244.1;Parent=gene-CCO35_RS22005;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=CCO35_RS22005;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 3804 3854 . + . ID=gene-CCO35_RS23885;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=CCO35_RS23885 NZ_NPME01000009.1 Protein Homology CDS 3804 3854 . + 0 ID=cds-WP_192930503.1;Parent=gene-CCO35_RS23885;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=CCO35_RS23885;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 3857 5503 . + . ID=gene-CCO35_RS22010;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=CCO35_RS22010;old_locus_tag=CCO35_21990 NZ_NPME01000009.1 Protein Homology CDS 3857 5503 . + 0 ID=cds-WP_001012573.1;Parent=gene-CCO35_RS22010;Dbxref=GenBank:WP_001012573.1;Name=WP_001012573.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=CCO35_RS22010;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012573.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 5500 5763 . + . ID=gene-CCO35_RS22015;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=CCO35_RS22015;old_locus_tag=CCO35_21995 NZ_NPME01000009.1 Protein Homology CDS 5500 5763 . + 0 ID=cds-WP_000983260.1;Parent=gene-CCO35_RS22015;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=CCO35_RS22015;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 5781 6710 . + . ID=gene-CCO35_RS22020;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=CCO35_RS22020;old_locus_tag=CCO35_22000 NZ_NPME01000009.1 Protein Homology CDS 5781 6710 . + 0 ID=cds-WP_000208532.1;Parent=gene-CCO35_RS22020;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=CCO35_RS22020;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 6871 8721 . + . ID=gene-CCO35_RS22025;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CCO35_RS22025;old_locus_tag=CCO35_22005 NZ_NPME01000009.1 Protein Homology CDS 6871 8721 . + 0 ID=cds-WP_094965382.1;Parent=gene-CCO35_RS22025;Dbxref=GenBank:WP_094965382.1;Name=WP_094965382.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=CCO35_RS22025;product=dihydroxy-acid dehydratase;protein_id=WP_094965382.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 8724 10268 . + . ID=gene-CCO35_RS22030;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CCO35_RS22030;old_locus_tag=CCO35_22010 NZ_NPME01000009.1 Protein Homology CDS 8724 10268 . + 0 ID=cds-WP_001524959.1;Parent=gene-CCO35_RS22030;Dbxref=GenBank:WP_001524959.1;Name=WP_001524959.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=CCO35_RS22030;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001524959.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 10374 11075 . + . ID=gene-CCO35_RS22035;Name=CCO35_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22035;old_locus_tag=CCO35_22015 NZ_NPME01000009.1 Protein Homology CDS 10374 11075 . + 0 ID=cds-WP_001544634.1;Parent=gene-CCO35_RS22035;Dbxref=GenBank:WP_001544634.1;Name=WP_001544634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929969.1;locus_tag=CCO35_RS22035;product=DUF2461 domain-containing protein;protein_id=WP_001544634.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 11086 11460 . - . ID=gene-CCO35_RS22040;Name=CCO35_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22040;old_locus_tag=CCO35_22020 NZ_NPME01000009.1 Protein Homology CDS 11086 11460 . - 0 ID=cds-WP_000937044.1;Parent=gene-CCO35_RS22040;Dbxref=GenBank:WP_000937044.1;Name=WP_000937044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000937044.1;locus_tag=CCO35_RS22040;product=hypothetical protein;protein_id=WP_000937044.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 11474 11863 . - . ID=gene-CCO35_RS22045;Name=CCO35_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22045;old_locus_tag=CCO35_22025 NZ_NPME01000009.1 Protein Homology CDS 11474 11863 . - 0 ID=cds-WP_001259309.1;Parent=gene-CCO35_RS22045;Dbxref=GenBank:WP_001259309.1;Name=WP_001259309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001259310.1;locus_tag=CCO35_RS22045;product=hypothetical protein;protein_id=WP_001259309.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 11876 12763 . - . ID=gene-CCO35_RS22050;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=CCO35_RS22050;old_locus_tag=CCO35_22030 NZ_NPME01000009.1 Protein Homology CDS 11876 12763 . - 0 ID=cds-WP_001530887.1;Parent=gene-CCO35_RS22050;Dbxref=GenBank:WP_001530887.1;Name=WP_001530887.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530887.1;locus_tag=CCO35_RS22050;product=HTH-type transcriptional activator IlvY;protein_id=WP_001530887.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 12928 14403 . + . ID=gene-CCO35_RS22055;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CCO35_RS22055;old_locus_tag=CCO35_22035 NZ_NPME01000009.1 Protein Homology CDS 12928 14403 . + 0 ID=cds-WP_000024943.1;Parent=gene-CCO35_RS22055;Dbxref=GenBank:WP_000024943.1;Name=WP_000024943.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=CCO35_RS22055;product=ketol-acid reductoisomerase;protein_id=WP_000024943.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 14495 14776 . - . ID=gene-CCO35_RS22060;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=CCO35_RS22060;old_locus_tag=CCO35_22040 NZ_NPME01000009.1 Protein Homology CDS 14495 14776 . - 0 ID=cds-WP_001096806.1;Parent=gene-CCO35_RS22060;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=CCO35_RS22060;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 14970 15671 . + . ID=gene-CCO35_RS22065;Name=CCO35_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22065;old_locus_tag=CCO35_22045 NZ_NPME01000009.1 Protein Homology CDS 14970 15671 . + 0 ID=cds-WP_001024339.1;Parent=gene-CCO35_RS22065;Dbxref=GenBank:WP_001024339.1;Name=WP_001024339.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=CCO35_RS22065;product=Crp/Fnr family transcriptional regulator;protein_id=WP_001024339.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 15700 16443 . + . ID=gene-CCO35_RS22070;Name=CCO35_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22070;old_locus_tag=CCO35_22050 NZ_NPME01000009.1 Protein Homology CDS 15700 16443 . + 0 ID=cds-WP_001182428.1;Parent=gene-CCO35_RS22070;Dbxref=GenBank:WP_001182428.1;Name=WP_001182428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182423.1;locus_tag=CCO35_RS22070;product=nucleoside phosphorylase;protein_id=WP_001182428.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 16443 17171 . + . ID=gene-CCO35_RS22075;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=CCO35_RS22075;old_locus_tag=CCO35_22055 NZ_NPME01000009.1 Protein Homology CDS 16443 17171 . + 0 ID=cds-WP_001543647.1;Parent=gene-CCO35_RS22075;Dbxref=GenBank:WP_001543647.1;Name=WP_001543647.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=CCO35_RS22075;product=nicotinamide riboside transporter PnuC;protein_id=WP_001543647.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 17271 19295 . + . ID=gene-CCO35_RS22080;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=CCO35_RS22080;old_locus_tag=CCO35_22060 NZ_NPME01000009.1 Protein Homology CDS 17271 19295 . + 0 ID=cds-WP_001238842.1;Parent=gene-CCO35_RS22080;Dbxref=GenBank:WP_001238842.1;Name=WP_001238842.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=CCO35_RS22080;product=DNA helicase Rep;protein_id=WP_001238842.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 19335 20816 . - . ID=gene-CCO35_RS22085;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=CCO35_RS22085;old_locus_tag=CCO35_22065 NZ_NPME01000009.1 Protein Homology CDS 19335 20816 . - 0 ID=cds-WP_001089447.1;Parent=gene-CCO35_RS22085;Dbxref=GenBank:WP_001089447.1;Name=WP_001089447.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=CCO35_RS22085;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089447.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 20935 22200 . - . ID=gene-CCO35_RS22090;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=CCO35_RS22090;old_locus_tag=CCO35_22070 NZ_NPME01000009.1 Protein Homology CDS 20935 22200 . - 0 ID=cds-WP_000047524.1;Parent=gene-CCO35_RS22090;Dbxref=GenBank:WP_000047524.1;Name=WP_000047524.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=CCO35_RS22090;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047524.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 22344 22673 . + . ID=gene-CCO35_RS22095;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CCO35_RS22095;old_locus_tag=CCO35_22075 NZ_NPME01000009.1 Protein Homology CDS 22344 22673 . + 0 ID=cds-WP_001280776.1;Parent=gene-CCO35_RS22095;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=CCO35_RS22095;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 22921 23004 . + . ID=gene-CCO35_RS24160;Name=CCO35_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24160 NZ_NPME01000009.1 Protein Homology CDS 22921 23004 . + 0 ID=cds-WP_134820045.1;Parent=gene-CCO35_RS24160;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=CCO35_RS24160;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 23092 24351 . + . ID=gene-CCO35_RS22100;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CCO35_RS22100;old_locus_tag=CCO35_22080 NZ_NPME01000009.1 Protein Homology CDS 23092 24351 . + 0 ID=cds-WP_001054532.1;Parent=gene-CCO35_RS22100;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=CCO35_RS22100;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 24581 25684 . + . ID=gene-CCO35_RS22105;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=CCO35_RS22105;old_locus_tag=CCO35_22085 NZ_NPME01000009.1 Protein Homology CDS 24581 25684 . + 0 ID=cds-WP_000771937.1;Parent=gene-CCO35_RS22105;Dbxref=GenBank:WP_000771937.1;Name=WP_000771937.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=CCO35_RS22105;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771937.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 25696 26742 . + . ID=gene-CCO35_RS22110;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=CCO35_RS22110;old_locus_tag=CCO35_22090 NZ_NPME01000009.1 Protein Homology CDS 25696 26742 . + 0 ID=cds-WP_000193413.1;Parent=gene-CCO35_RS22110;Dbxref=GenBank:WP_000193413.1;Name=WP_000193413.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=CCO35_RS22110;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193413.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 26798 27928 . + . ID=gene-CCO35_RS22115;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CCO35_RS22115;old_locus_tag=CCO35_22095 NZ_NPME01000009.1 Protein Homology CDS 26798 27928 . + 0 ID=cds-WP_000866685.1;Parent=gene-CCO35_RS22115;Dbxref=GenBank:WP_000866685.1;Name=WP_000866685.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=CCO35_RS22115;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866685.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 27925 29187 . + . ID=gene-CCO35_RS22120;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=CCO35_RS22120;old_locus_tag=CCO35_22100 NZ_NPME01000009.1 Protein Homology CDS 27925 29187 . + 0 ID=cds-WP_023197569.1;Parent=gene-CCO35_RS22120;Dbxref=GenBank:WP_023197569.1;Name=WP_023197569.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=CCO35_RS22120;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_023197569.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 29187 30254 . + . ID=gene-CCO35_RS22125;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=CCO35_RS22125;old_locus_tag=CCO35_22105 NZ_NPME01000009.1 Protein Homology CDS 29187 30254 . + 0 ID=cds-WP_031570786.1;Parent=gene-CCO35_RS22125;Dbxref=GenBank:WP_031570786.1;Name=WP_031570786.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=CCO35_RS22125;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_031570786.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 30197 30511 . + . ID=gene-CCO35_RS24215;Name=CCO35_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS24215;old_locus_tag=CCO35_22110 NZ_NPME01000009.1 Protein Homology CDS 30197 30511 . + 0 ID=cds-WP_223151143.1;Parent=gene-CCO35_RS24215;Dbxref=GenBank:WP_223151143.1;Name=WP_223151143.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=CCO35_RS24215;product=sugar phosphate nucleotidyltransferase;protein_id=WP_223151143.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 30489 31166 . + . ID=gene-CCO35_RS22135;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=CCO35_RS22135;old_locus_tag=CCO35_22115 NZ_NPME01000009.1 Protein Homology CDS 30489 31166 . + 0 ID=cds-WP_001145154.1;Parent=gene-CCO35_RS22135;Dbxref=GenBank:WP_001145154.1;Name=WP_001145154.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=CCO35_RS22135;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145154.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 31171 32301 . + . ID=gene-CCO35_RS22140;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=CCO35_RS22140;old_locus_tag=CCO35_22120 NZ_NPME01000009.1 Protein Homology CDS 31171 32301 . + 0 ID=cds-WP_000612080.1;Parent=gene-CCO35_RS22140;Dbxref=GenBank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=CCO35_RS22140;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 32303 33553 . + . ID=gene-CCO35_RS22145;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=CCO35_RS22145;old_locus_tag=CCO35_22125 NZ_NPME01000009.1 Protein Homology CDS 32303 33553 . + 0 ID=cds-WP_000050299.1;Parent=gene-CCO35_RS22145;Dbxref=GenBank:WP_000050299.1;Name=WP_000050299.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=CCO35_RS22145;product=lipid III flippase WzxE;protein_id=WP_000050299.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 33550 34629 . + . ID=gene-CCO35_RS22150;Name=CCO35_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22150;old_locus_tag=CCO35_22130 NZ_NPME01000009.1 Protein Homology CDS 33550 34629 . + 0 ID=cds-WP_000217187.1;Parent=gene-CCO35_RS22150;Dbxref=GenBank:WP_000217187.1;Name=WP_000217187.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=CCO35_RS22150;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217187.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 34626 35984 . + . ID=gene-CCO35_RS22155;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=CCO35_RS22155;old_locus_tag=CCO35_22135 NZ_NPME01000009.1 Protein Homology CDS 34626 35984 . + 0 ID=cds-WP_000055605.1;Parent=gene-CCO35_RS22155;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=CCO35_RS22155;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 35981 36721 . + . ID=gene-CCO35_RS22160;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=CCO35_RS22160;old_locus_tag=CCO35_22140 NZ_NPME01000009.1 Protein Homology CDS 35981 36721 . + 0 ID=cds-WP_000183625.1;Parent=gene-CCO35_RS22160;Dbxref=GenBank:WP_000183625.1;Name=WP_000183625.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=CCO35_RS22160;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183625.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 36928 38313 . + . ID=gene-CCO35_RS22165;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=CCO35_RS22165;old_locus_tag=CCO35_22145 NZ_NPME01000009.1 Protein Homology CDS 36928 38313 . + 0 ID=cds-WP_000818378.1;Parent=gene-CCO35_RS22165;Dbxref=GenBank:WP_000818378.1;Name=WP_000818378.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=CCO35_RS22165;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818378.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 38416 38492 . + . ID=gene-CCO35_RS22170;Name=CCO35_RS22170;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS22170;old_locus_tag=CCO35_22150 NZ_NPME01000009.1 tRNAscan-SE tRNA 38416 38492 . + . ID=rna-CCO35_RS22170;Parent=gene-CCO35_RS22170;anticodon=(pos:38450..38452);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS22170;product=tRNA-Arg NZ_NPME01000009.1 tRNAscan-SE exon 38416 38492 . + . ID=exon-CCO35_RS22170-1;Parent=rna-CCO35_RS22170;anticodon=(pos:38450..38452);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS22170;product=tRNA-Arg NZ_NPME01000009.1 RefSeq gene 38547 38622 . + . ID=gene-CCO35_RS22175;Name=CCO35_RS22175;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS22175;old_locus_tag=CCO35_22155 NZ_NPME01000009.1 tRNAscan-SE tRNA 38547 38622 . + . ID=rna-CCO35_RS22175;Parent=gene-CCO35_RS22175;anticodon=(pos:38580..38582);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS22175;product=tRNA-His NZ_NPME01000009.1 tRNAscan-SE exon 38547 38622 . + . ID=exon-CCO35_RS22175-1;Parent=rna-CCO35_RS22175;anticodon=(pos:38580..38582);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS22175;product=tRNA-His NZ_NPME01000009.1 RefSeq gene 38643 38729 . + . ID=gene-CCO35_RS22180;Name=CCO35_RS22180;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS22180;old_locus_tag=CCO35_22160 NZ_NPME01000009.1 tRNAscan-SE tRNA 38643 38729 . + . ID=rna-CCO35_RS22180;Parent=gene-CCO35_RS22180;anticodon=(pos:38677..38679);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS22180;product=tRNA-Leu NZ_NPME01000009.1 tRNAscan-SE exon 38643 38729 . + . ID=exon-CCO35_RS22180-1;Parent=rna-CCO35_RS22180;anticodon=(pos:38677..38679);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS22180;product=tRNA-Leu NZ_NPME01000009.1 RefSeq gene 38772 38848 . + . ID=gene-CCO35_RS22185;Name=CCO35_RS22185;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO35_RS22185;old_locus_tag=CCO35_22165 NZ_NPME01000009.1 tRNAscan-SE tRNA 38772 38848 . + . ID=rna-CCO35_RS22185;Parent=gene-CCO35_RS22185;anticodon=(pos:38806..38808);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS22185;product=tRNA-Pro NZ_NPME01000009.1 tRNAscan-SE exon 38772 38848 . + . ID=exon-CCO35_RS22185-1;Parent=rna-CCO35_RS22185;anticodon=(pos:38806..38808);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO35_RS22185;product=tRNA-Pro NZ_NPME01000009.1 RefSeq gene 39430 40626 . - . ID=gene-CCO35_RS22190;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CCO35_RS22190;old_locus_tag=CCO35_22170 NZ_NPME01000009.1 Protein Homology CDS 39430 40626 . - 0 ID=cds-WP_001546072.1;Parent=gene-CCO35_RS22190;Dbxref=GenBank:WP_001546072.1;Name=WP_001546072.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=CCO35_RS22190;product=protoheme IX biogenesis protein HemY;protein_id=WP_001546072.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 40629 41798 . - . ID=gene-CCO35_RS22195;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=CCO35_RS22195;old_locus_tag=CCO35_22175 NZ_NPME01000009.1 Protein Homology CDS 40629 41798 . - 0 ID=cds-WP_000138961.1;Parent=gene-CCO35_RS22195;Dbxref=GenBank:WP_000138961.1;Name=WP_000138961.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=CCO35_RS22195;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138961.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 41820 42560 . - . ID=gene-CCO35_RS22200;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=CCO35_RS22200;old_locus_tag=CCO35_22180 NZ_NPME01000009.1 Protein Homology CDS 41820 42560 . - 0 ID=cds-WP_094965383.1;Parent=gene-CCO35_RS22200;Dbxref=GenBank:WP_094965383.1;Name=WP_094965383.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=CCO35_RS22200;product=uroporphyrinogen-III synthase;protein_id=WP_094965383.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 42557 43498 . - . ID=gene-CCO35_RS22205;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CCO35_RS22205;old_locus_tag=CCO35_22185 NZ_NPME01000009.1 Protein Homology CDS 42557 43498 . - 0 ID=cds-WP_001521319.1;Parent=gene-CCO35_RS22205;Dbxref=GenBank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=CCO35_RS22205;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 43875 46421 . + . ID=gene-CCO35_RS22210;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=CCO35_RS22210;old_locus_tag=CCO35_22190 NZ_NPME01000009.1 Protein Homology CDS 43875 46421 . + 0 ID=cds-WP_000281719.1;Parent=gene-CCO35_RS22210;Dbxref=GenBank:WP_000281719.1;Name=WP_000281719.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=CCO35_RS22210;product=class I adenylate cyclase;protein_id=WP_000281719.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 46499 46819 . - . ID=gene-CCO35_RS22215;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=CCO35_RS22215;old_locus_tag=CCO35_22195 NZ_NPME01000009.1 Protein Homology CDS 46499 46819 . - 0 ID=cds-WP_000999927.1;Parent=gene-CCO35_RS22215;Dbxref=GenBank:WP_000999927.1;Name=WP_000999927.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=CCO35_RS22215;product=iron donor protein CyaY;protein_id=WP_000999927.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 46889 47278 . - . ID=gene-CCO35_RS22220;Name=CCO35_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22220;old_locus_tag=CCO35_22200 NZ_NPME01000009.1 Protein Homology CDS 46889 47278 . - 0 ID=cds-WP_001125571.1;Parent=gene-CCO35_RS22220;Dbxref=GenBank:WP_001125571.1;Name=WP_001125571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=CCO35_RS22220;product=DUF3021 family protein;protein_id=WP_001125571.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 47266 49269 . - . ID=gene-CCO35_RS22225;Name=CCO35_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22225;old_locus_tag=CCO35_22205 NZ_NPME01000009.1 Protein Homology CDS 47266 49269 . - 0 ID=cds-WP_024151720.1;Parent=gene-CCO35_RS22225;Dbxref=GenBank:WP_024151720.1;Name=WP_024151720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200018.1;locus_tag=CCO35_RS22225;product=hypothetical protein;protein_id=WP_024151720.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 49455 49658 . + . ID=gene-CCO35_RS22230;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=CCO35_RS22230;old_locus_tag=CCO35_22210 NZ_NPME01000009.1 Protein Homology CDS 49455 49658 . + 0 ID=cds-WP_000799903.1;Parent=gene-CCO35_RS22230;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=CCO35_RS22230;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 49695 50519 . + . ID=gene-CCO35_RS22235;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=CCO35_RS22235;old_locus_tag=CCO35_22215 NZ_NPME01000009.1 Protein Homology CDS 49695 50519 . + 0 ID=cds-WP_001160671.1;Parent=gene-CCO35_RS22235;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=CCO35_RS22235;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 50516 51223 . + . ID=gene-CCO35_RS22240;Name=CCO35_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22240;old_locus_tag=CCO35_22220 NZ_NPME01000009.1 Protein Homology CDS 50516 51223 . + 0 ID=cds-WP_000812760.1;Parent=gene-CCO35_RS22240;Dbxref=GenBank:WP_000812760.1;Name=WP_000812760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=CCO35_RS22240;product=DUF484 domain-containing protein;protein_id=WP_000812760.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 51220 52122 . + . ID=gene-CCO35_RS22245;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CCO35_RS22245;old_locus_tag=CCO35_22225 NZ_NPME01000009.1 Protein Homology CDS 51220 52122 . + 0 ID=cds-WP_000132872.1;Parent=gene-CCO35_RS22245;Dbxref=GenBank:WP_000132872.1;Name=WP_000132872.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=CCO35_RS22245;product=tyrosine recombinase XerC;protein_id=WP_000132872.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 52122 52838 . + . ID=gene-CCO35_RS22250;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=CCO35_RS22250;old_locus_tag=CCO35_22230 NZ_NPME01000009.1 Protein Homology CDS 52122 52838 . + 0 ID=cds-WP_001213560.1;Parent=gene-CCO35_RS22250;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=CCO35_RS22250;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 52974 55136 . + . ID=gene-CCO35_RS22255;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=CCO35_RS22255;old_locus_tag=CCO35_22235 NZ_NPME01000009.1 Protein Homology CDS 52974 55136 . + 0 ID=cds-WP_000383436.1;Parent=gene-CCO35_RS22255;Dbxref=GenBank:WP_000383436.1;Name=WP_000383436.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=CCO35_RS22255;product=DNA helicase II;protein_id=WP_000383436.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 55396 55452 . + . ID=gene-CCO35_RS24170;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=CCO35_RS24170 NZ_NPME01000009.1 Protein Homology CDS 55396 55452 . + 0 ID=cds-WP_213083418.1;Parent=gene-CCO35_RS24170;Dbxref=GenBank:WP_213083418.1;Name=WP_213083418.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=CCO35_RS24170;product=YsgD/CorL family protein;protein_id=WP_213083418.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 55608 56558 . + . ID=gene-CCO35_RS22265;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=CCO35_RS22265;old_locus_tag=CCO35_22245 NZ_NPME01000009.1 Protein Homology CDS 55608 56558 . + 0 ID=cds-WP_000947139.1;Parent=gene-CCO35_RS22265;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=CCO35_RS22265;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 56606 56986 . - . ID=gene-CCO35_RS22270;Name=CCO35_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22270;old_locus_tag=CCO35_22250 NZ_NPME01000009.1 Protein Homology CDS 56606 56986 . - 0 ID=cds-WP_000619299.1;Parent=gene-CCO35_RS22270;Dbxref=GenBank:WP_000619299.1;Name=WP_000619299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727015.1;locus_tag=CCO35_RS22270;product=hypothetical protein;protein_id=WP_000619299.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 57161 57457 . + . ID=gene-CCO35_RS22275;Name=CCO35_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22275;old_locus_tag=CCO35_22255 NZ_NPME01000009.1 Protein Homology CDS 57161 57457 . + 0 ID=cds-WP_001156607.1;Parent=gene-CCO35_RS22275;Dbxref=GenBank:WP_001156607.1;Name=WP_001156607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=CCO35_RS22275;product=hypothetical protein;protein_id=WP_001156607.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 57497 58384 . - . ID=gene-CCO35_RS22280;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO35_RS22280;old_locus_tag=CCO35_22260 NZ_NPME01000009.1 Protein Homology CDS 57497 58384 . - 0 ID=cds-WP_000339081.1;Parent=gene-CCO35_RS22280;Dbxref=GenBank:WP_000339081.1;Name=WP_000339081.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=CCO35_RS22280;product=EamA family transporter RarD;protein_id=WP_000339081.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 58428 58895 . - . ID=gene-CCO35_RS22285;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=CCO35_RS22285;old_locus_tag=CCO35_22265 NZ_NPME01000009.1 Protein Homology CDS 58428 58895 . - 0 ID=cds-WP_001277145.1;Parent=gene-CCO35_RS22285;Dbxref=GenBank:WP_001277145.1;Name=WP_001277145.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=CCO35_RS22285;product=acyl-CoA thioesterase YigI;protein_id=WP_001277145.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 59060 59929 . + . ID=gene-CCO35_RS22290;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=CCO35_RS22290;old_locus_tag=CCO35_22270 NZ_NPME01000009.1 Protein Homology CDS 59060 59929 . + 0 ID=cds-WP_001201692.1;Parent=gene-CCO35_RS22290;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=CCO35_RS22290;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 60013 61842 . + . ID=gene-CCO35_RS22295;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CCO35_RS22295;old_locus_tag=CCO35_22275 NZ_NPME01000009.1 Protein Homology CDS 60013 61842 . + 0 ID=cds-WP_001614753.1;Parent=gene-CCO35_RS22295;Dbxref=GenBank:WP_001614753.1;Name=WP_001614753.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=CCO35_RS22295;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001614753.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 61906 62526 . + . ID=gene-CCO35_RS22300;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=CCO35_RS22300;old_locus_tag=CCO35_22280 NZ_NPME01000009.1 Protein Homology CDS 61906 62526 . + 0 ID=cds-WP_000980078.1;Parent=gene-CCO35_RS22300;Dbxref=GenBank:WP_000980078.1;Name=WP_000980078.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=CCO35_RS22300;product=threonine export protein RhtC;protein_id=WP_000980078.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 62566 63186 . - . ID=gene-CCO35_RS22305;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=CCO35_RS22305;old_locus_tag=CCO35_22285 NZ_NPME01000009.1 Protein Homology CDS 62566 63186 . - 0 ID=cds-WP_000142520.1;Parent=gene-CCO35_RS22305;Dbxref=GenBank:WP_000142520.1;Name=WP_000142520.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=CCO35_RS22305;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142520.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 63297 64313 . + . ID=gene-CCO35_RS22310;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=CCO35_RS22310;old_locus_tag=CCO35_22290 NZ_NPME01000009.1 Protein Homology CDS 63297 64313 . + 0 ID=cds-WP_000487685.1;Parent=gene-CCO35_RS22310;Dbxref=GenBank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=CCO35_RS22310;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 64329 65129 . + . ID=gene-CCO35_RS22315;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=CCO35_RS22315;old_locus_tag=CCO35_22295 NZ_NPME01000009.1 Protein Homology CDS 64329 65129 . + 0 ID=cds-WP_000285336.1;Parent=gene-CCO35_RS22315;Dbxref=GenBank:WP_000285336.1;Name=WP_000285336.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=CCO35_RS22315;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285336.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 65210 66109 . + . ID=gene-CCO35_RS22320;Name=CCO35_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22320;old_locus_tag=CCO35_22300 NZ_NPME01000009.1 Protein Homology CDS 65210 66109 . + 0 ID=cds-WP_001196254.1;Parent=gene-CCO35_RS22320;Dbxref=GenBank:WP_001196254.1;Name=WP_001196254.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=CCO35_RS22320;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196254.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 65997 66950 . - . ID=gene-CCO35_RS22325;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=CCO35_RS22325;old_locus_tag=CCO35_22305 NZ_NPME01000009.1 Protein Homology CDS 65997 66950 . - 0 ID=cds-WP_000569782.1;Parent=gene-CCO35_RS22325;Dbxref=GenBank:WP_000569782.1;Name=WP_000569782.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=CCO35_RS22325;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569782.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 67199 69463 . + . ID=gene-CCO35_RS22330;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CCO35_RS22330;old_locus_tag=CCO35_22310 NZ_NPME01000009.1 Protein Homology CDS 67199 69463 . + 0 ID=cds-WP_000154196.1;Parent=gene-CCO35_RS22330;Dbxref=GenBank:WP_000154196.1;Name=WP_000154196.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=CCO35_RS22330;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154196.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 69798 71141 . + . ID=gene-CCO35_RS22335;Name=CCO35_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22335;old_locus_tag=CCO35_22315 NZ_NPME01000009.1 Protein Homology CDS 69798 71141 . + 0 ID=cds-WP_023213954.1;Parent=gene-CCO35_RS22335;Dbxref=GenBank:WP_023213954.1;Name=WP_023213954.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=CCO35_RS22335;product=anaerobic sulfatase maturase;protein_id=WP_023213954.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 71221 72033 . - . ID=gene-CCO35_RS22340;Name=CCO35_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22340;old_locus_tag=CCO35_22320 NZ_NPME01000009.1 Protein Homology CDS 71221 72033 . - 0 ID=cds-WP_000213959.1;Parent=gene-CCO35_RS22340;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=CCO35_RS22340;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 72292 73053 . + . ID=gene-CCO35_RS22345;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=CCO35_RS22345;old_locus_tag=CCO35_22325 NZ_NPME01000009.1 Protein Homology CDS 72292 73053 . + 0 ID=cds-WP_000045169.1;Parent=gene-CCO35_RS22345;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=CCO35_RS22345;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 73193 74623 . + . ID=gene-CCO35_RS22350;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=CCO35_RS22350;old_locus_tag=CCO35_22330 NZ_NPME01000009.1 Protein Homology CDS 73193 74623 . + 0 ID=cds-WP_000355562.1;Parent=gene-CCO35_RS22350;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=CCO35_RS22350;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 74719 75474 . + . ID=gene-CCO35_RS22355;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=CCO35_RS22355;old_locus_tag=CCO35_22335 NZ_NPME01000009.1 Protein Homology CDS 74719 75474 . + 0 ID=cds-WP_000229009.1;Parent=gene-CCO35_RS22355;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=CCO35_RS22355;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 75484 76089 . + . ID=gene-CCO35_RS22360;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=CCO35_RS22360;old_locus_tag=CCO35_22340 NZ_NPME01000009.1 Protein Homology CDS 75484 76089 . + 0 ID=cds-WP_001116092.1;Parent=gene-CCO35_RS22360;Dbxref=GenBank:WP_001116092.1;Name=WP_001116092.1;Ontology_term=GO:0032150;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process from chorismate|0032150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=CCO35_RS22360;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116092.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 76086 77726 . + . ID=gene-CCO35_RS22365;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=CCO35_RS22365;old_locus_tag=CCO35_22345 NZ_NPME01000009.1 Protein Homology CDS 76086 77726 . + 0 ID=cds-WP_000187559.1;Parent=gene-CCO35_RS22365;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=CCO35_RS22365;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 77933 78187 . + . ID=gene-CCO35_RS22370;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=CCO35_RS22370;old_locus_tag=CCO35_22350 NZ_NPME01000009.1 Protein Homology CDS 77933 78187 . + 0 ID=cds-WP_000508972.1;Parent=gene-CCO35_RS22370;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=CCO35_RS22370;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 78191 78739 . + . ID=gene-CCO35_RS22375;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=CCO35_RS22375;old_locus_tag=CCO35_22355 NZ_NPME01000009.1 Protein Homology CDS 78191 78739 . + 0 ID=cds-WP_000459612.1;Parent=gene-CCO35_RS22375;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=CCO35_RS22375;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 78742 79521 . + . ID=gene-CCO35_RS22380;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=CCO35_RS22380;old_locus_tag=CCO35_22360 NZ_NPME01000009.1 Protein Homology CDS 78742 79521 . + 0 ID=cds-WP_000257554.1;Parent=gene-CCO35_RS22380;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=CCO35_RS22380;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 79563 80345 . + . ID=gene-CCO35_RS22385;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=CCO35_RS22385;old_locus_tag=CCO35_22365 NZ_NPME01000009.1 Protein Homology CDS 79563 80345 . + 0 ID=cds-WP_000459642.1;Parent=gene-CCO35_RS22385;Dbxref=GenBank:WP_000459642.1;Name=WP_000459642.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=CCO35_RS22385;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459642.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 80353 80841 . - . ID=gene-CCO35_RS22390;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=CCO35_RS22390;old_locus_tag=CCO35_22370 NZ_NPME01000009.1 Protein Homology CDS 80353 80841 . - 0 ID=cds-WP_001192410.1;Parent=gene-CCO35_RS22390;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=CCO35_RS22390;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 81027 82505 . + . ID=gene-CCO35_RS22395;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=CCO35_RS22395;old_locus_tag=CCO35_22375 NZ_NPME01000009.1 Protein Homology CDS 81027 82505 . + 0 ID=cds-WP_000339760.1;Parent=gene-CCO35_RS22395;Dbxref=GenBank:WP_000339760.1;Name=WP_000339760.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=CCO35_RS22395;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339760.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 82591 83292 . + . ID=gene-CCO35_RS22400;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=CCO35_RS22400;old_locus_tag=CCO35_22380 NZ_NPME01000009.1 Protein Homology CDS 82591 83292 . + 0 ID=cds-WP_000209832.1;Parent=gene-CCO35_RS22400;Dbxref=GenBank:WP_000209832.1;Name=WP_000209832.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=CCO35_RS22400;product=NAD(P)H-flavin reductase;protein_id=WP_000209832.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 83546 85369 . + . ID=gene-CCO35_RS22405;Name=CCO35_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22405;old_locus_tag=CCO35_22385 NZ_NPME01000009.1 Protein Homology CDS 83546 85369 . + 0 ID=cds-WP_000669888.1;Parent=gene-CCO35_RS22405;Dbxref=GenBank:WP_000669888.1;Name=WP_000669888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=CCO35_RS22405;product=aryl-sulfate sulfotransferase;protein_id=WP_000669888.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 85566 86729 . - . ID=gene-CCO35_RS22410;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=CCO35_RS22410;old_locus_tag=CCO35_22390 NZ_NPME01000009.1 Protein Homology CDS 85566 86729 . - 0 ID=cds-WP_000438778.1;Parent=gene-CCO35_RS22410;Dbxref=GenBank:WP_000438778.1;Name=WP_000438778.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=CCO35_RS22410;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438778.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 86739 88928 . - . ID=gene-CCO35_RS22415;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CCO35_RS22415;old_locus_tag=CCO35_22395 NZ_NPME01000009.1 Protein Homology CDS 86739 88928 . - 0 ID=cds-WP_000966016.1;Parent=gene-CCO35_RS22415;Dbxref=GenBank:WP_000966016.1;Name=WP_000966016.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=CCO35_RS22415;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000966016.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 89118 90449 . + . ID=gene-CCO35_RS22420;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=CCO35_RS22420;old_locus_tag=CCO35_22400 NZ_NPME01000009.1 Protein Homology CDS 89118 90449 . + 0 ID=cds-WP_023137093.1;Parent=gene-CCO35_RS22420;Dbxref=GenBank:WP_023137093.1;Name=WP_023137093.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=CCO35_RS22420;product=Xaa-Pro dipeptidase;protein_id=WP_023137093.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 90449 91063 . + . ID=gene-CCO35_RS22425;Name=CCO35_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO35_RS22425;old_locus_tag=CCO35_22405 NZ_NPME01000009.1 Protein Homology CDS 90449 91063 . + 0 ID=cds-WP_000378897.1;Parent=gene-CCO35_RS22425;Dbxref=GenBank:WP_000378897.1;Name=WP_000378897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=CCO35_RS22425;product=IMPACT family protein;protein_id=WP_000378897.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 91102 92553 . + . ID=gene-CCO35_RS22430;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=CCO35_RS22430;old_locus_tag=CCO35_22410 NZ_NPME01000009.1 Protein Homology CDS 91102 92553 . + 0 ID=cds-WP_000545688.1;Parent=gene-CCO35_RS22430;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=CCO35_RS22430;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 92565 93110 . + . ID=gene-CCO35_RS22435;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=CCO35_RS22435;old_locus_tag=CCO35_22415 NZ_NPME01000009.1 Protein Homology CDS 92565 93110 . + 0 ID=cds-WP_000853983.1;Parent=gene-CCO35_RS22435;Dbxref=GenBank:WP_000853983.1;Name=WP_000853983.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=CCO35_RS22435;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853983.1;transl_table=11 NZ_NPME01000009.1 RefSeq gene 93488 93597 . + . ID=gene-CCO35_RS22440;Name=CCO35_RS22440;end_range=93597,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO35_RS22440;old_locus_tag=CCO35_22420;partial=true NZ_NPME01000009.1 cmsearch rRNA 93488 93597 . + . ID=rna-CCO35_RS22440;Parent=gene-CCO35_RS22440;Dbxref=RFAM:RF00177;end_range=93597,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS22440;partial=true;product=16S ribosomal RNA NZ_NPME01000009.1 cmsearch exon 93488 93597 . + . ID=exon-CCO35_RS22440-1;Parent=rna-CCO35_RS22440;Dbxref=RFAM:RF00177;end_range=93597,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO35_RS22440;partial=true;product=16S ribosomal RNA ###