##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM226630v1 #!genome-build-accession NCBI_Assembly:GCF_002266305.1 #!annotation-date 04/15/2025 21:42:16 #!annotation-source NCBI RefSeq GCF_002266305.1-RS_2025_04_15 ##sequence-region NZ_NPMD01000001.1 1 773191 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000001.1 RefSeq region 1 773191 . + . ID=NZ_NPMD01000001.1:1..773191;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000001.1 RefSeq gene 34 164 . - . ID=gene-CCO34_RS00005;Name=CCO34_RS00005;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS00005;old_locus_tag=CCO34_00005 NZ_NPMD01000001.1 cmsearch ncRNA 34 164 . - . ID=rna-CCO34_RS00005;Parent=gene-CCO34_RS00005;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS00005;product=RtT sRNA NZ_NPMD01000001.1 cmsearch exon 34 164 . - . ID=exon-CCO34_RS00005-1;Parent=rna-CCO34_RS00005;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS00005;product=RtT sRNA NZ_NPMD01000001.1 RefSeq gene 208 338 . - . ID=gene-CCO34_RS00010;Name=CCO34_RS00010;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS00010;old_locus_tag=CCO34_00010 NZ_NPMD01000001.1 cmsearch ncRNA 208 338 . - . ID=rna-CCO34_RS00010;Parent=gene-CCO34_RS00010;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS00010;product=RtT sRNA NZ_NPMD01000001.1 cmsearch exon 208 338 . - . ID=exon-CCO34_RS00010-1;Parent=rna-CCO34_RS00010;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS00010;product=RtT sRNA NZ_NPMD01000001.1 RefSeq gene 382 512 . - . ID=gene-CCO34_RS00015;Name=CCO34_RS00015;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS00015;old_locus_tag=CCO34_00015 NZ_NPMD01000001.1 cmsearch ncRNA 382 512 . - . ID=rna-CCO34_RS00015;Parent=gene-CCO34_RS00015;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS00015;product=RtT sRNA NZ_NPMD01000001.1 cmsearch exon 382 512 . - . ID=exon-CCO34_RS00015-1;Parent=rna-CCO34_RS00015;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS00015;product=RtT sRNA NZ_NPMD01000001.1 RefSeq gene 556 640 . - . ID=gene-CCO34_RS00020;Name=CCO34_RS00020;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS00020;old_locus_tag=CCO34_00020 NZ_NPMD01000001.1 tRNAscan-SE tRNA 556 640 . - . ID=rna-CCO34_RS00020;Parent=gene-CCO34_RS00020;anticodon=(pos:complement(604..606));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS00020;product=tRNA-Tyr NZ_NPMD01000001.1 tRNAscan-SE exon 556 640 . - . ID=exon-CCO34_RS00020-1;Parent=rna-CCO34_RS00020;anticodon=(pos:complement(604..606));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS00020;product=tRNA-Tyr NZ_NPMD01000001.1 RefSeq gene 675 806 . - . ID=gene-CCO34_RS00025;Name=CCO34_RS00025;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS00025;old_locus_tag=CCO34_00025 NZ_NPMD01000001.1 cmsearch ncRNA 675 806 . - . ID=rna-CCO34_RS00025;Parent=gene-CCO34_RS00025;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS00025;product=RtT sRNA NZ_NPMD01000001.1 cmsearch exon 675 806 . - . ID=exon-CCO34_RS00025-1;Parent=rna-CCO34_RS00025;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS00025;product=RtT sRNA NZ_NPMD01000001.1 RefSeq gene 851 935 . - . ID=gene-CCO34_RS00030;Name=CCO34_RS00030;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS00030;old_locus_tag=CCO34_00030 NZ_NPMD01000001.1 tRNAscan-SE tRNA 851 935 . - . ID=rna-CCO34_RS00030;Parent=gene-CCO34_RS00030;anticodon=(pos:complement(899..901));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS00030;product=tRNA-Tyr NZ_NPMD01000001.1 tRNAscan-SE exon 851 935 . - . ID=exon-CCO34_RS00030-1;Parent=rna-CCO34_RS00030;anticodon=(pos:complement(899..901));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS00030;product=tRNA-Tyr NZ_NPMD01000001.1 RefSeq gene 969 1106 . - . ID=gene-CCO34_RS00035;Name=CCO34_RS00035;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS00035;old_locus_tag=CCO34_00035 NZ_NPMD01000001.1 cmsearch ncRNA 969 1106 . - . ID=rna-CCO34_RS00035;Parent=gene-CCO34_RS00035;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS00035;product=RtT sRNA NZ_NPMD01000001.1 cmsearch exon 969 1106 . - . ID=exon-CCO34_RS00035-1;Parent=rna-CCO34_RS00035;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS00035;product=RtT sRNA NZ_NPMD01000001.1 RefSeq gene 1276 2118 . - . ID=gene-CCO34_RS00040;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=CCO34_RS00040;old_locus_tag=CCO34_00040 NZ_NPMD01000001.1 Protein Homology CDS 1276 2118 . - 0 ID=cds-WP_001191156.1;Parent=gene-CCO34_RS00040;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=CCO34_RS00040;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 2169 2627 . - . ID=gene-CCO34_RS00045;Name=CCO34_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00045;old_locus_tag=CCO34_00045 NZ_NPMD01000001.1 Protein Homology CDS 2169 2627 . - 0 ID=cds-WP_001540172.1;Parent=gene-CCO34_RS00045;Dbxref=GenBank:WP_001540172.1;Name=WP_001540172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=CCO34_RS00045;product=YchJ family protein;protein_id=WP_001540172.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 2738 3643 . + . ID=gene-CCO34_RS00050;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=CCO34_RS00050;old_locus_tag=CCO34_00050 NZ_NPMD01000001.1 Protein Homology CDS 2738 3643 . + 0 ID=cds-WP_001230575.1;Parent=gene-CCO34_RS00050;Dbxref=GenBank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=CCO34_RS00050;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 3734 4747 . + . ID=gene-CCO34_RS00055;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=CCO34_RS00055;old_locus_tag=CCO34_00055 NZ_NPMD01000001.1 Protein Homology CDS 3734 4747 . + 0 ID=cds-WP_000193432.1;Parent=gene-CCO34_RS00055;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=CCO34_RS00055;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 4950 5858 . + . ID=gene-CCO34_RS00060;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CCO34_RS00060;old_locus_tag=CCO34_00060 NZ_NPMD01000001.1 Protein Homology CDS 4950 5858 . + 0 ID=cds-WP_000729450.1;Parent=gene-CCO34_RS00060;Dbxref=GenBank:WP_000729450.1;Name=WP_000729450.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=CCO34_RS00060;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729450.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 5990 6403 . - . ID=gene-CCO34_RS00065;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=CCO34_RS00065;old_locus_tag=CCO34_00065 NZ_NPMD01000001.1 Protein Homology CDS 5990 6403 . - 0 ID=cds-WP_001287383.1;Parent=gene-CCO34_RS00065;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=CCO34_RS00065;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 7066 7683 . + . ID=gene-CCO34_RS00070;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=CCO34_RS00070;old_locus_tag=CCO34_00070 NZ_NPMD01000001.1 Protein Homology CDS 7066 7683 . + 0 ID=cds-WP_000068095.1;Parent=gene-CCO34_RS00070;Dbxref=GenBank:WP_000068095.1;Name=WP_000068095.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=CCO34_RS00070;product=thymidine kinase;protein_id=WP_000068095.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 7880 10558 . - . ID=gene-CCO34_RS00075;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=CCO34_RS00075;old_locus_tag=CCO34_00075 NZ_NPMD01000001.1 Protein Homology CDS 7880 10558 . - 0 ID=cds-WP_000301678.1;Parent=gene-CCO34_RS00075;Dbxref=GenBank:WP_000301678.1;Name=WP_000301678.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=CCO34_RS00075;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301678.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 11035 11682 . + . ID=gene-CCO34_RS00080;Name=CCO34_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00080;old_locus_tag=CCO34_00080 NZ_NPMD01000001.1 Protein Homology CDS 11035 11682 . + 0 ID=cds-WP_000615840.1;Parent=gene-CCO34_RS00080;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=CCO34_RS00080;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 12446 14077 . + . ID=gene-CCO34_RS00090;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=CCO34_RS00090;old_locus_tag=CCO34_00090 NZ_NPMD01000001.1 Protein Homology CDS 12446 14077 . + 0 ID=cds-WP_001535312.1;Parent=gene-CCO34_RS00090;Dbxref=GenBank:WP_001535312.1;Name=WP_001535312.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=CCO34_RS00090;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001535312.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 14200 15120 . + . ID=gene-CCO34_RS00095;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=CCO34_RS00095;old_locus_tag=CCO34_00095 NZ_NPMD01000001.1 Protein Homology CDS 14200 15120 . + 0 ID=cds-WP_000911097.1;Parent=gene-CCO34_RS00095;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=CCO34_RS00095;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 15135 16043 . + . ID=gene-CCO34_RS00100;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=CCO34_RS00100;old_locus_tag=CCO34_00100 NZ_NPMD01000001.1 Protein Homology CDS 15135 16043 . + 0 ID=cds-WP_000979653.1;Parent=gene-CCO34_RS00100;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=CCO34_RS00100;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 16055 17062 . + . ID=gene-CCO34_RS00105;Name=CCO34_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00105;old_locus_tag=CCO34_00105 NZ_NPMD01000001.1 Protein Homology CDS 16055 17062 . + 0 ID=cds-WP_094965388.1;Parent=gene-CCO34_RS00105;Dbxref=GenBank:WP_094965388.1;Name=WP_094965388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=CCO34_RS00105;product=ABC transporter ATP-binding protein;protein_id=WP_094965388.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 17059 18063 . + . ID=gene-CCO34_RS00110;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=CCO34_RS00110;old_locus_tag=CCO34_00110 NZ_NPMD01000001.1 Protein Homology CDS 17059 18063 . + 0 ID=cds-WP_000994698.1;Parent=gene-CCO34_RS00110;Dbxref=GenBank:WP_000994698.1;Name=WP_000994698.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=CCO34_RS00110;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994698.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 18111 18947 . + . ID=gene-CCO34_RS00115;Name=CCO34_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00115;old_locus_tag=CCO34_00115 NZ_NPMD01000001.1 Protein Homology CDS 18111 18947 . + 0 ID=cds-WP_000059074.1;Parent=gene-CCO34_RS00115;Dbxref=GenBank:WP_000059074.1;Name=WP_000059074.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=CCO34_RS00115;product=ion transporter;protein_id=WP_000059074.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 18995 19324 . - . ID=gene-CCO34_RS00120;Name=CCO34_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00120;old_locus_tag=CCO34_00120 NZ_NPMD01000001.1 Protein Homology CDS 18995 19324 . - 0 ID=cds-WP_000425070.1;Parent=gene-CCO34_RS00120;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=CCO34_RS00120;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 19358 20818 . - . ID=gene-CCO34_RS00125;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CCO34_RS00125;old_locus_tag=CCO34_00125 NZ_NPMD01000001.1 Protein Homology CDS 19358 20818 . - 0 ID=cds-WP_000206886.1;Parent=gene-CCO34_RS00125;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=CCO34_RS00125;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 20961 21134 . + . ID=gene-CCO34_RS00130;Name=CCO34_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00130;old_locus_tag=CCO34_00130 NZ_NPMD01000001.1 Protein Homology CDS 20961 21134 . + 0 ID=cds-WP_001531561.1;Parent=gene-CCO34_RS00130;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=CCO34_RS00130;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 21178 21474 . - . ID=gene-CCO34_RS00135;Name=CCO34_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00135;old_locus_tag=CCO34_00135 NZ_NPMD01000001.1 Protein Homology CDS 21178 21474 . - 0 ID=cds-WP_000967605.1;Parent=gene-CCO34_RS00135;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=CCO34_RS00135;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 21698 22420 . + . ID=gene-CCO34_RS00140;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=CCO34_RS00140;old_locus_tag=CCO34_00140 NZ_NPMD01000001.1 Protein Homology CDS 21698 22420 . + 0 ID=cds-WP_001531563.1;Parent=gene-CCO34_RS00140;Dbxref=GenBank:WP_001531563.1;Name=WP_001531563.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=CCO34_RS00140;product=TonB system transport protein TonB;protein_id=WP_001531563.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 22479 22880 . - . ID=gene-CCO34_RS00145;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=CCO34_RS00145;old_locus_tag=CCO34_00145 NZ_NPMD01000001.1 Protein Homology CDS 22479 22880 . - 0 ID=cds-WP_000210319.1;Parent=gene-CCO34_RS00145;Dbxref=GenBank:WP_000210319.1;Name=WP_000210319.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=CCO34_RS00145;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210319.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 23041 23580 . - . ID=gene-CCO34_RS00150;Name=CCO34_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00150;old_locus_tag=CCO34_00150 NZ_NPMD01000001.1 Protein Homology CDS 23041 23580 . - 0 ID=cds-WP_000808682.1;Parent=gene-CCO34_RS00150;Dbxref=GenBank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=CCO34_RS00150;product=septation protein A;protein_id=WP_000808682.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 23637 24380 . - . ID=gene-CCO34_RS00155;Name=CCO34_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00155;old_locus_tag=CCO34_00155 NZ_NPMD01000001.1 Protein Homology CDS 23637 24380 . - 0 ID=cds-WP_000028507.1;Parent=gene-CCO34_RS00155;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=CCO34_RS00155;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 24406 24810 . - . ID=gene-CCO34_RS00160;Name=CCO34_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00160;old_locus_tag=CCO34_00160 NZ_NPMD01000001.1 Protein Homology CDS 24406 24810 . - 0 ID=cds-WP_000114955.1;Parent=gene-CCO34_RS00160;Dbxref=GenBank:WP_000114955.1;Name=WP_000114955.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=CCO34_RS00160;product=YkgJ family cysteine cluster protein;protein_id=WP_000114955.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 25148 25786 . + . ID=gene-CCO34_RS00165;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=CCO34_RS00165;old_locus_tag=CCO34_00165 NZ_NPMD01000001.1 Protein Homology CDS 25148 25786 . + 0 ID=cds-WP_000714798.1;Parent=gene-CCO34_RS00165;Dbxref=GenBank:WP_000714798.1;Name=WP_000714798.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=CCO34_RS00165;product=outer membrane protein OmpW;protein_id=WP_000714798.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 25868 26746 . - . ID=gene-CCO34_RS00170;Name=CCO34_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00170;old_locus_tag=CCO34_00170 NZ_NPMD01000001.1 Protein Homology CDS 25868 26746 . - 0 ID=cds-WP_000488349.1;Parent=gene-CCO34_RS00170;Dbxref=GenBank:WP_000488349.1;Name=WP_000488349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=CCO34_RS00170;product=manganese catalase family protein;protein_id=WP_000488349.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 26766 27272 . - . ID=gene-CCO34_RS00175;Name=CCO34_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00175;old_locus_tag=CCO34_00175 NZ_NPMD01000001.1 Protein Homology CDS 26766 27272 . - 0 ID=cds-WP_001109977.1;Parent=gene-CCO34_RS00175;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=CCO34_RS00175;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 27346 27849 . - . ID=gene-CCO34_RS00180;Name=CCO34_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00180;old_locus_tag=CCO34_00180 NZ_NPMD01000001.1 Protein Homology CDS 27346 27849 . - 0 ID=cds-WP_001022822.1;Parent=gene-CCO34_RS00180;Dbxref=GenBank:WP_001022822.1;Name=WP_001022822.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=CCO34_RS00180;product=ferritin-like domain-containing protein;protein_id=WP_001022822.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 27939 28121 . - . ID=gene-CCO34_RS00185;Name=CCO34_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00185;old_locus_tag=CCO34_00185 NZ_NPMD01000001.1 Protein Homology CDS 27939 28121 . - 0 ID=cds-WP_000807657.1;Parent=gene-CCO34_RS00185;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=CCO34_RS00185;product=general stress protein;protein_id=WP_000807657.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 28601 29407 . - . ID=gene-CCO34_RS00190;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CCO34_RS00190;old_locus_tag=CCO34_00190 NZ_NPMD01000001.1 Protein Homology CDS 28601 29407 . - 0 ID=cds-WP_000443029.1;Parent=gene-CCO34_RS00190;Dbxref=GenBank:WP_000443029.1;Name=WP_000443029.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=CCO34_RS00190;product=tryptophan synthase subunit alpha;protein_id=WP_000443029.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 29407 30600 . - . ID=gene-CCO34_RS00195;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CCO34_RS00195;old_locus_tag=CCO34_00195 NZ_NPMD01000001.1 Protein Homology CDS 29407 30600 . - 0 ID=cds-WP_000209483.1;Parent=gene-CCO34_RS00195;Dbxref=GenBank:WP_000209483.1;Name=WP_000209483.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=CCO34_RS00195;product=tryptophan synthase subunit beta;protein_id=WP_000209483.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 30610 31968 . - . ID=gene-CCO34_RS00200;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=CCO34_RS00200;old_locus_tag=CCO34_00200 NZ_NPMD01000001.1 Protein Homology CDS 30610 31968 . - 0 ID=cds-WP_001195301.1;Parent=gene-CCO34_RS00200;Dbxref=GenBank:WP_001195301.1;Name=WP_001195301.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=CCO34_RS00200;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_001195301.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 31972 33567 . - . ID=gene-CCO34_RS00205;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CCO34_RS00205;old_locus_tag=CCO34_00205 NZ_NPMD01000001.1 Protein Homology CDS 31972 33567 . - 0 ID=cds-WP_000763481.1;Parent=gene-CCO34_RS00205;Dbxref=GenBank:WP_000763481.1;Name=WP_000763481.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=CCO34_RS00205;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763481.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 33567 35129 . - . ID=gene-CCO34_RS00210;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=CCO34_RS00210;old_locus_tag=CCO34_00210 NZ_NPMD01000001.1 Protein Homology CDS 33567 35129 . - 0 ID=cds-WP_001194384.1;Parent=gene-CCO34_RS00210;Dbxref=GenBank:WP_001194384.1;Name=WP_001194384.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=CCO34_RS00210;product=anthranilate synthase component I;protein_id=WP_001194384.1;transl_table=11 NZ_NPMD01000001.1 cmsearch sequence_feature 35152 35247 . - . ID=id-NZ_NPMD01000001.1:35152..35247;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMD01000001.1 RefSeq gene 35224 35268 . - . ID=gene-CCO34_RS25220;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=CCO34_RS25220 NZ_NPMD01000001.1 Protein Homology CDS 35224 35268 . - 0 ID=cds-WP_010989026.1;Parent=gene-CCO34_RS25220;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=CCO34_RS25220;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 35390 36271 . + . ID=gene-CCO34_RS00215;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=CCO34_RS00215;old_locus_tag=CCO34_00215 NZ_NPMD01000001.1 Protein Homology CDS 35390 36271 . + 0 ID=cds-WP_000500431.1;Parent=gene-CCO34_RS00215;Dbxref=GenBank:WP_000500431.1;Name=WP_000500431.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=CCO34_RS00215;product=RNase RNM;protein_id=WP_000500431.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 36279 36899 . + . ID=gene-CCO34_RS00220;Name=CCO34_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00220;old_locus_tag=CCO34_00220 NZ_NPMD01000001.1 Protein Homology CDS 36279 36899 . + 0 ID=cds-WP_000077250.1;Parent=gene-CCO34_RS00220;Dbxref=GenBank:WP_000077250.1;Name=WP_000077250.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=CCO34_RS00220;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077250.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 37000 37875 . + . ID=gene-CCO34_RS00225;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=CCO34_RS00225;old_locus_tag=CCO34_00225 NZ_NPMD01000001.1 Protein Homology CDS 37000 37875 . + 0 ID=cds-WP_001291233.1;Parent=gene-CCO34_RS00225;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=CCO34_RS00225;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 37962 38552 . - . ID=gene-CCO34_RS00230;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=CCO34_RS00230;old_locus_tag=CCO34_00230 NZ_NPMD01000001.1 Protein Homology CDS 37962 38552 . - 0 ID=cds-WP_001278856.1;Parent=gene-CCO34_RS00230;Dbxref=GenBank:WP_001278856.1;Name=WP_001278856.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=CCO34_RS00230;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278856.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 38549 39310 . - . ID=gene-CCO34_RS00235;Name=CCO34_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00235;old_locus_tag=CCO34_00235 NZ_NPMD01000001.1 Protein Homology CDS 38549 39310 . - 0 ID=cds-WP_000559310.1;Parent=gene-CCO34_RS00235;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=CCO34_RS00235;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 39548 40594 . + . ID=gene-CCO34_RS00240;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=CCO34_RS00240;old_locus_tag=CCO34_00240 NZ_NPMD01000001.1 Protein Homology CDS 39548 40594 . + 0 ID=cds-WP_000422082.1;Parent=gene-CCO34_RS00240;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=CCO34_RS00240;product=protease SohB;protein_id=WP_000422082.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 40636 40887 . - . ID=gene-CCO34_RS00245;Name=CCO34_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00245;old_locus_tag=CCO34_00245 NZ_NPMD01000001.1 Protein Homology CDS 40636 40887 . - 0 ID=cds-WP_000548616.1;Parent=gene-CCO34_RS00245;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=CCO34_RS00245;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 41290 43887 . + . ID=gene-CCO34_RS00255;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CCO34_RS00255;old_locus_tag=CCO34_00255 NZ_NPMD01000001.1 Protein Homology CDS 41290 43887 . + 0 ID=cds-WP_000513593.1;Parent=gene-CCO34_RS00255;Dbxref=GenBank:WP_000513593.1;Name=WP_000513593.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=CCO34_RS00255;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 44298 45272 . + . ID=gene-CCO34_RS00265;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=CCO34_RS00265;old_locus_tag=CCO34_00265 NZ_NPMD01000001.1 Protein Homology CDS 44298 45272 . + 0 ID=cds-WP_000776233.1;Parent=gene-CCO34_RS00265;Dbxref=GenBank:WP_000776233.1;Name=WP_000776233.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=CCO34_RS00265;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776233.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 45553 45693 . + . ID=gene-CCO34_RS00270;Name=CCO34_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00270;old_locus_tag=CCO34_00270 NZ_NPMD01000001.1 Protein Homology CDS 45553 45693 . + 0 ID=cds-WP_213083417.1;Parent=gene-CCO34_RS00270;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=CCO34_RS00270;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 45694 45864 . + . ID=gene-CCO34_RS00275;Name=CCO34_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00275;old_locus_tag=CCO34_00275 NZ_NPMD01000001.1 Protein Homology CDS 45694 45864 . + 0 ID=cds-WP_000029027.1;Parent=gene-CCO34_RS00275;Dbxref=GenBank:WP_000029027.1;Name=WP_000029027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=CCO34_RS00275;product=hypothetical protein;protein_id=WP_000029027.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 45974 46066 . + . ID=gene-CCO34_RS25720;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=CCO34_RS25720 NZ_NPMD01000001.1 Protein Homology CDS 45974 46066 . + 0 ID=cds-WP_223148964.1;Parent=gene-CCO34_RS25720;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=CCO34_RS25720;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 46249 48924 . + . ID=gene-CCO34_RS00285;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CCO34_RS00285;old_locus_tag=CCO34_00285 NZ_NPMD01000001.1 Protein Homology CDS 46249 48924 . + 0 ID=cds-WP_080181025.1;Parent=gene-CCO34_RS00285;Dbxref=GenBank:WP_080181025.1;Name=WP_080181025.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=CCO34_RS00285;product=aconitate hydratase AcnA;protein_id=WP_080181025.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 48980 49570 . - . ID=gene-CCO34_RS00290;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=CCO34_RS00290;old_locus_tag=CCO34_00290 NZ_NPMD01000001.1 Protein Homology CDS 48980 49570 . - 0 ID=cds-WP_001176284.1;Parent=gene-CCO34_RS00290;Dbxref=GenBank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=CCO34_RS00290;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 49766 50530 . + . ID=gene-CCO34_RS00295;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=CCO34_RS00295;old_locus_tag=CCO34_00295 NZ_NPMD01000001.1 Protein Homology CDS 49766 50530 . + 0 ID=cds-WP_000948651.1;Parent=gene-CCO34_RS00295;Dbxref=GenBank:WP_000948651.1;Name=WP_000948651.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=CCO34_RS00295;product=phosphatidylglycerophosphatase B;protein_id=WP_000948651.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 50680 50988 . + . ID=gene-CCO34_RS00305;Name=CCO34_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00305;old_locus_tag=CCO34_00305 NZ_NPMD01000001.1 Protein Homology CDS 50680 50988 . + 0 ID=cds-WP_000876301.1;Parent=gene-CCO34_RS00305;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=CCO34_RS00305;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 50995 52164 . + . ID=gene-CCO34_RS00310;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=CCO34_RS00310;old_locus_tag=CCO34_00310 NZ_NPMD01000001.1 Protein Homology CDS 50995 52164 . + 0 ID=cds-WP_000891378.1;Parent=gene-CCO34_RS00310;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=CCO34_RS00310;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 52355 53092 . + . ID=gene-CCO34_RS00320;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CCO34_RS00320;old_locus_tag=CCO34_00320 NZ_NPMD01000001.1 Protein Homology CDS 52355 53092 . + 0 ID=cds-WP_023236835.1;Parent=gene-CCO34_RS00320;Dbxref=GenBank:WP_023236835.1;Name=WP_023236835.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=CCO34_RS00320;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_023236835.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 53092 53418 . + . ID=gene-CCO34_RS00325;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=CCO34_RS00325;old_locus_tag=CCO34_00325 NZ_NPMD01000001.1 Protein Homology CDS 53092 53418 . + 0 ID=cds-WP_023236834.1;Parent=gene-CCO34_RS00325;Dbxref=GenBank:WP_023236834.1;Name=WP_023236834.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=CCO34_RS00325;product=stress response translation initiation inhibitor YciH;protein_id=WP_023236834.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 53538 53756 . - . ID=gene-CCO34_RS00330;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=CCO34_RS00330;old_locus_tag=CCO34_00330 NZ_NPMD01000001.1 Protein Homology CDS 53538 53756 . - 0 ID=cds-WP_000481166.1;Parent=gene-CCO34_RS00330;Dbxref=GenBank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=CCO34_RS00330;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 54015 54767 . - . ID=gene-CCO34_RS00335;Name=CCO34_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00335;old_locus_tag=CCO34_00335 NZ_NPMD01000001.1 Protein Homology CDS 54015 54767 . - 0 ID=cds-WP_001088593.1;Parent=gene-CCO34_RS00335;Dbxref=GenBank:WP_001088593.1;Name=WP_001088593.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=CCO34_RS00335;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088593.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 54854 55033 . - . ID=gene-CCO34_RS00340;Name=CCO34_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00340;old_locus_tag=CCO34_00340 NZ_NPMD01000001.1 Protein Homology CDS 54854 55033 . - 0 ID=cds-WP_001279854.1;Parent=gene-CCO34_RS00340;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=CCO34_RS00340;product=hypothetical protein;protein_id=WP_001279854.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 55155 57137 . - . ID=gene-CCO34_RS00345;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=CCO34_RS00345;old_locus_tag=CCO34_00345 NZ_NPMD01000001.1 Protein Homology CDS 55155 57137 . - 0 ID=cds-WP_080181026.1;Parent=gene-CCO34_RS00345;Dbxref=GenBank:WP_080181026.1;Name=WP_080181026.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=CCO34_RS00345;product=cyclic di-GMP phosphodiesterase;protein_id=WP_080181026.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 57399 59333 . - . ID=gene-CCO34_RS00355;Name=CCO34_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00355;old_locus_tag=CCO34_00355 NZ_NPMD01000001.1 Protein Homology CDS 57399 59333 . - 0 ID=cds-WP_000485041.1;Parent=gene-CCO34_RS00355;Dbxref=GenBank:WP_000485041.1;Name=WP_000485041.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=CCO34_RS00355;product=exoribonuclease II;protein_id=WP_000485041.1;transl_table=11 NZ_NPMD01000001.1 RefSeq pseudogene 59578 60555 . - . ID=gene-CCO34_RS00360;Name=CCO34_RS00360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS00360;old_locus_tag=CCO34_00360;partial=true;pseudo=true;start_range=.,59578 NZ_NPMD01000001.1 Protein Homology CDS 59578 60555 . - 0 ID=cds-CCO34_RS00360;Parent=gene-CCO34_RS00360;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=CCO34_RS00360;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,59578;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 60755 61543 . - . ID=gene-CCO34_RS00365;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CCO34_RS00365;old_locus_tag=CCO34_00365 NZ_NPMD01000001.1 Protein Homology CDS 60755 61543 . - 0 ID=cds-WP_000506501.1;Parent=gene-CCO34_RS00365;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=CCO34_RS00365;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11 NZ_NPMD01000001.1 RefSeq pseudogene 61661 61959 . - . ID=gene-CCO34_RS25725;Name=CCO34_RS25725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25725;old_locus_tag=CCO34_00370;pseudo=true NZ_NPMD01000001.1 Protein Homology CDS 61661 61959 . - 0 ID=cds-CCO34_RS25725;Parent=gene-CCO34_RS25725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=CCO34_RS25725;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 61934 62113 . - . ID=gene-CCO34_RS00375;Name=CCO34_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00375;old_locus_tag=CCO34_00375 NZ_NPMD01000001.1 Protein Homology CDS 61934 62113 . - 0 ID=cds-WP_001535215.1;Parent=gene-CCO34_RS00375;Dbxref=GenBank:WP_001535215.1;Name=WP_001535215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=CCO34_RS00375;product=hypothetical protein;protein_id=WP_001535215.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 62148 63521 . + . ID=gene-CCO34_RS00380;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=CCO34_RS00380;old_locus_tag=CCO34_00380 NZ_NPMD01000001.1 Protein Homology CDS 62148 63521 . + 0 ID=cds-WP_001116907.1;Parent=gene-CCO34_RS00380;Dbxref=GenBank:WP_001116907.1;Name=WP_001116907.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=CCO34_RS00380;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_001116907.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 63988 64695 . + . ID=gene-CCO34_RS00385;Name=CCO34_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00385;old_locus_tag=CCO34_00385 NZ_NPMD01000001.1 Protein Homology CDS 63988 64695 . + 0 ID=cds-WP_001268395.1;Parent=gene-CCO34_RS00385;Dbxref=GenBank:WP_001268395.1;Name=WP_001268395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=CCO34_RS00385;product=EAL domain-containing protein;protein_id=WP_001268395.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 64711 65517 . - . ID=gene-CCO34_RS00390;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=CCO34_RS00390;old_locus_tag=CCO34_00390 NZ_NPMD01000001.1 Protein Homology CDS 64711 65517 . - 0 ID=cds-WP_000230462.1;Parent=gene-CCO34_RS00390;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=CCO34_RS00390;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 65519 66511 . - . ID=gene-CCO34_RS00395;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=CCO34_RS00395;old_locus_tag=CCO34_00395 NZ_NPMD01000001.1 Protein Homology CDS 65519 66511 . - 0 ID=cds-WP_001128869.1;Parent=gene-CCO34_RS00395;Dbxref=GenBank:WP_001128869.1;Name=WP_001128869.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=CCO34_RS00395;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128869.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 66511 67401 . - . ID=gene-CCO34_RS00400;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=CCO34_RS00400;old_locus_tag=CCO34_00400 NZ_NPMD01000001.1 Protein Homology CDS 66511 67401 . - 0 ID=cds-WP_001146150.1;Parent=gene-CCO34_RS00400;Dbxref=GenBank:WP_001146150.1;Name=WP_001146150.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=CCO34_RS00400;product=peptide ABC transporter permease SapC;protein_id=WP_001146150.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 67388 68353 . - . ID=gene-CCO34_RS00405;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=CCO34_RS00405;old_locus_tag=CCO34_00405 NZ_NPMD01000001.1 Protein Homology CDS 67388 68353 . - 0 ID=cds-WP_000583298.1;Parent=gene-CCO34_RS00405;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=CCO34_RS00405;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 68350 69999 . - . ID=gene-CCO34_RS00410;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=CCO34_RS00410;old_locus_tag=CCO34_00410 NZ_NPMD01000001.1 Protein Homology CDS 68350 69999 . - 0 ID=cds-WP_001241620.1;Parent=gene-CCO34_RS00410;Dbxref=GenBank:WP_001241620.1;Name=WP_001241620.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=CCO34_RS00410;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241620.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 70111 71091 . - . ID=gene-CCO34_RS00415;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=CCO34_RS00415;old_locus_tag=CCO34_00415 NZ_NPMD01000001.1 Protein Homology CDS 70111 71091 . - 0 ID=cds-WP_000807306.1;Parent=gene-CCO34_RS00415;Dbxref=GenBank:WP_000807306.1;Name=WP_000807306.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=CCO34_RS00415;product=phage shock protein operon transcriptional activator;protein_id=WP_000807306.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 71262 71930 . + . ID=gene-CCO34_RS00420;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=CCO34_RS00420;old_locus_tag=CCO34_00420 NZ_NPMD01000001.1 Protein Homology CDS 71262 71930 . + 0 ID=cds-WP_000511006.1;Parent=gene-CCO34_RS00420;Dbxref=GenBank:WP_000511006.1;Name=WP_000511006.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=CCO34_RS00420;product=phage shock protein PspA;protein_id=WP_000511006.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 71990 72214 . + . ID=gene-CCO34_RS00425;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=CCO34_RS00425;old_locus_tag=CCO34_00425 NZ_NPMD01000001.1 Protein Homology CDS 71990 72214 . + 0 ID=cds-WP_001274953.1;Parent=gene-CCO34_RS00425;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=CCO34_RS00425;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 72214 72573 . + . ID=gene-CCO34_RS00430;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=CCO34_RS00430;old_locus_tag=CCO34_00430 NZ_NPMD01000001.1 Protein Homology CDS 72214 72573 . + 0 ID=cds-WP_000508938.1;Parent=gene-CCO34_RS00430;Dbxref=GenBank:WP_000508938.1;Name=WP_000508938.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=CCO34_RS00430;product=envelope stress response membrane protein PspC;protein_id=WP_000508938.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 72596 72814 . + . ID=gene-CCO34_RS00435;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=CCO34_RS00435;old_locus_tag=CCO34_00435 NZ_NPMD01000001.1 Protein Homology CDS 72596 72814 . + 0 ID=cds-WP_001097610.1;Parent=gene-CCO34_RS00435;Dbxref=GenBank:WP_001097610.1;Name=WP_001097610.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=CCO34_RS00435;product=phage shock protein PspD;protein_id=WP_001097610.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 72890 73204 . + . ID=gene-CCO34_RS00440;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=CCO34_RS00440;old_locus_tag=CCO34_00440 NZ_NPMD01000001.1 Protein Homology CDS 72890 73204 . + 0 ID=cds-WP_000913432.1;Parent=gene-CCO34_RS00440;Dbxref=GenBank:WP_000913432.1;Name=WP_000913432.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=CCO34_RS00440;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913432.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 73353 74750 . + . ID=gene-CCO34_RS00445;Name=CCO34_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00445;old_locus_tag=CCO34_00445 NZ_NPMD01000001.1 Protein Homology CDS 73353 74750 . + 0 ID=cds-WP_000825860.1;Parent=gene-CCO34_RS00445;Dbxref=GenBank:WP_000825860.1;Name=WP_000825860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=CCO34_RS00445;product=YcjX family protein;protein_id=WP_000825860.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 74747 75808 . + . ID=gene-CCO34_RS00450;Name=CCO34_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00450;old_locus_tag=CCO34_00450 NZ_NPMD01000001.1 Protein Homology CDS 74747 75808 . + 0 ID=cds-WP_001294482.1;Parent=gene-CCO34_RS00450;Dbxref=GenBank:WP_001294482.1;Name=WP_001294482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=CCO34_RS00450;product=YcjF family protein;protein_id=WP_001294482.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 75956 77497 . + . ID=gene-CCO34_RS00455;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=CCO34_RS00455;old_locus_tag=CCO34_00455 NZ_NPMD01000001.1 Protein Homology CDS 75956 77497 . + 0 ID=cds-WP_001235493.1;Parent=gene-CCO34_RS00455;Dbxref=GenBank:WP_001235493.1;Name=WP_001235493.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=CCO34_RS00455;product=transcriptional regulator TyrR;protein_id=WP_001235493.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 77587 78093 . - . ID=gene-CCO34_RS00460;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CCO34_RS00460;old_locus_tag=CCO34_00460 NZ_NPMD01000001.1 Protein Homology CDS 77587 78093 . - 0 ID=cds-WP_000084401.1;Parent=gene-CCO34_RS00460;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=CCO34_RS00460;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 78209 79174 . + . ID=gene-CCO34_RS00465;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=CCO34_RS00465;old_locus_tag=CCO34_00465 NZ_NPMD01000001.1 Protein Homology CDS 78209 79174 . + 0 ID=cds-WP_001258063.1;Parent=gene-CCO34_RS00465;Dbxref=GenBank:WP_001258063.1;Name=WP_001258063.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=CCO34_RS00465;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001258063.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 79149 79877 . - . ID=gene-CCO34_RS00470;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=CCO34_RS00470;old_locus_tag=CCO34_00470 NZ_NPMD01000001.1 Protein Homology CDS 79149 79877 . - 0 ID=cds-WP_000219108.1;Parent=gene-CCO34_RS00470;Dbxref=GenBank:WP_000219108.1;Name=WP_000219108.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=CCO34_RS00470;product=murein tripeptide amidase MpaA;protein_id=WP_000219108.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 80067 81680 . + . ID=gene-CCO34_RS00475;Name=CCO34_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00475;old_locus_tag=CCO34_00475 NZ_NPMD01000001.1 Protein Homology CDS 80067 81680 . + 0 ID=cds-WP_001216550.1;Parent=gene-CCO34_RS00475;Dbxref=GenBank:WP_001216550.1;Name=WP_001216550.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=CCO34_RS00475;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216550.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 81777 82706 . - . ID=gene-CCO34_RS00480;Name=CCO34_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00480;old_locus_tag=CCO34_00480 NZ_NPMD01000001.1 Protein Homology CDS 81777 82706 . - 0 ID=cds-WP_000814348.1;Parent=gene-CCO34_RS00480;Dbxref=GenBank:WP_000814348.1;Name=WP_000814348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=CCO34_RS00480;product=aromatic alcohol reductase;protein_id=WP_000814348.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 82825 83730 . + . ID=gene-CCO34_RS00485;Name=CCO34_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00485;old_locus_tag=CCO34_00485 NZ_NPMD01000001.1 Protein Homology CDS 82825 83730 . + 0 ID=cds-WP_000359208.1;Parent=gene-CCO34_RS00485;Dbxref=GenBank:WP_000359208.1;Name=WP_000359208.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=CCO34_RS00485;product=LysR family transcriptional regulator;protein_id=WP_000359208.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 84004 84873 . + . ID=gene-CCO34_RS00490;Name=CCO34_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00490;old_locus_tag=CCO34_00490 NZ_NPMD01000001.1 Protein Homology CDS 84004 84873 . + 0 ID=cds-WP_000456767.1;Parent=gene-CCO34_RS00490;Dbxref=GenBank:WP_000456767.1;Name=WP_000456767.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=CCO34_RS00490;product=aldo/keto reductase;protein_id=WP_000456767.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 84964 85677 . - . ID=gene-CCO34_RS00495;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=CCO34_RS00495;old_locus_tag=CCO34_00495 NZ_NPMD01000001.1 Protein Homology CDS 84964 85677 . - 0 ID=cds-WP_000979084.1;Parent=gene-CCO34_RS00495;Dbxref=GenBank:WP_000979084.1;Name=WP_000979084.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=CCO34_RS00495;product=SDR family oxidoreductase;protein_id=WP_000979084.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 85755 86345 . + . ID=gene-CCO34_RS00500;Name=CCO34_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00500;old_locus_tag=CCO34_00500 NZ_NPMD01000001.1 Protein Homology CDS 85755 86345 . + 0 ID=cds-WP_000208473.1;Parent=gene-CCO34_RS00500;Dbxref=GenBank:WP_000208473.1;Name=WP_000208473.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=CCO34_RS00500;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208473.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 86474 86710 . + . ID=gene-CCO34_RS00505;Name=CCO34_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00505;old_locus_tag=CCO34_00505 NZ_NPMD01000001.1 Protein Homology CDS 86474 86710 . + 0 ID=cds-WP_001168017.1;Parent=gene-CCO34_RS00505;Dbxref=GenBank:WP_001168017.1;Name=WP_001168017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=CCO34_RS00505;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168017.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 86924 88033 . - . ID=gene-CCO34_RS00510;Name=CCO34_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00510;old_locus_tag=CCO34_00510 NZ_NPMD01000001.1 Protein Homology CDS 86924 88033 . - 0 ID=cds-WP_001748424.1;Parent=gene-CCO34_RS00510;Dbxref=GenBank:WP_001748424.1;Name=WP_001748424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=CCO34_RS00510;product=hypothetical protein;protein_id=WP_001748424.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 88423 89280 . - . ID=gene-CCO34_RS00515;Name=CCO34_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00515;old_locus_tag=CCO34_00515 NZ_NPMD01000001.1 Protein Homology CDS 88423 89280 . - 0 ID=cds-WP_010989022.1;Parent=gene-CCO34_RS00515;Dbxref=GenBank:WP_010989022.1;Name=WP_010989022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=CCO34_RS00515;product=GyrI-like domain-containing protein;protein_id=WP_010989022.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 89574 90419 . + . ID=gene-CCO34_RS00520;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=CCO34_RS00520;old_locus_tag=CCO34_00520 NZ_NPMD01000001.1 Protein Homology CDS 89574 90419 . + 0 ID=cds-WP_000273684.1;Parent=gene-CCO34_RS00520;Dbxref=GenBank:WP_000273684.1;Name=WP_000273684.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=CCO34_RS00520;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_000273684.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 90494 92476 . + . ID=gene-CCO34_RS00525;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=CCO34_RS00525;old_locus_tag=CCO34_00525 NZ_NPMD01000001.1 Protein Homology CDS 90494 92476 . + 0 ID=cds-WP_000232053.1;Parent=gene-CCO34_RS00525;Dbxref=GenBank:WP_000232053.1;Name=WP_000232053.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=CCO34_RS00525;product=two-partner secretion translocator ZirT;protein_id=WP_000232053.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 92497 93327 . + . ID=gene-CCO34_RS00530;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=CCO34_RS00530;old_locus_tag=CCO34_00530 NZ_NPMD01000001.1 Protein Homology CDS 92497 93327 . + 0 ID=cds-WP_001242934.1;Parent=gene-CCO34_RS00530;Dbxref=GenBank:WP_001242934.1;Name=WP_001242934.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=CCO34_RS00530;product=two-partner-like secretion system exoprotein ZirS;protein_id=WP_001242934.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 93426 93983 . + . ID=gene-CCO34_RS00535;Name=CCO34_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00535;old_locus_tag=CCO34_00535 NZ_NPMD01000001.1 Protein Homology CDS 93426 93983 . + 0 ID=cds-WP_001119107.1;Parent=gene-CCO34_RS00535;Dbxref=GenBank:WP_001119107.1;Name=WP_001119107.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=CCO34_RS00535;product=redoxin family protein;protein_id=WP_001119107.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 94089 94427 . - . ID=gene-CCO34_RS00540;Name=CCO34_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00540;old_locus_tag=CCO34_00540 NZ_NPMD01000001.1 Protein Homology CDS 94089 94427 . - 0 ID=cds-WP_000051809.1;Parent=gene-CCO34_RS00540;Dbxref=GenBank:WP_000051809.1;Name=WP_000051809.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=CCO34_RS00540;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_000051809.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 94455 95141 . - . ID=gene-CCO34_RS00545;Name=CCO34_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00545;old_locus_tag=CCO34_00545 NZ_NPMD01000001.1 Protein Homology CDS 94455 95141 . - 0 ID=cds-WP_080180972.1;Parent=gene-CCO34_RS00545;Dbxref=GenBank:WP_080180972.1;Name=WP_080180972.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=CCO34_RS00545;product=B3/B4 domain-containing protein;protein_id=WP_080180972.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 95185 95787 . + . ID=gene-CCO34_RS00550;Name=CCO34_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00550;old_locus_tag=CCO34_00550 NZ_NPMD01000001.1 Protein Homology CDS 95185 95787 . + 0 ID=cds-WP_000163371.1;Parent=gene-CCO34_RS00550;Dbxref=GenBank:WP_000163371.1;Name=WP_000163371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=CCO34_RS00550;product=helix-turn-helix domain-containing protein;protein_id=WP_000163371.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 95869 96900 . - . ID=gene-CCO34_RS00555;Name=CCO34_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00555;old_locus_tag=CCO34_00555 NZ_NPMD01000001.1 Protein Homology CDS 95869 96900 . - 0 ID=cds-WP_000493667.1;Parent=gene-CCO34_RS00555;Dbxref=GenBank:WP_000493667.1;Name=WP_000493667.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=CCO34_RS00555;product=mechanosensitive ion channel family protein;protein_id=WP_000493667.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 97139 97393 . + . ID=gene-CCO34_RS00560;Name=CCO34_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00560;old_locus_tag=CCO34_00560 NZ_NPMD01000001.1 Protein Homology CDS 97139 97393 . + 0 ID=cds-WP_000605645.1;Parent=gene-CCO34_RS00560;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=CCO34_RS00560;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 97448 98395 . - . ID=gene-CCO34_RS00565;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=CCO34_RS00565;old_locus_tag=CCO34_00565 NZ_NPMD01000001.1 Protein Homology CDS 97448 98395 . - 0 ID=cds-WP_001262138.1;Parent=gene-CCO34_RS00565;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=CCO34_RS00565;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 98546 99298 . - . ID=gene-CCO34_RS00570;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=CCO34_RS00570;old_locus_tag=CCO34_00570 NZ_NPMD01000001.1 Protein Homology CDS 98546 99298 . - 0 ID=cds-WP_000611914.1;Parent=gene-CCO34_RS00570;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=CCO34_RS00570;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 99494 100009 . - . ID=gene-CCO34_RS00575;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=CCO34_RS00575;old_locus_tag=CCO34_00575 NZ_NPMD01000001.1 Protein Homology CDS 99494 100009 . - 0 ID=cds-WP_000945036.1;Parent=gene-CCO34_RS00575;Dbxref=GenBank:WP_000945036.1;Name=WP_000945036.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=CCO34_RS00575;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945036.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 100267 100830 . + . ID=gene-CCO34_RS00580;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=CCO34_RS00580;old_locus_tag=CCO34_00580 NZ_NPMD01000001.1 Protein Homology CDS 100267 100830 . + 0 ID=cds-WP_001046799.1;Parent=gene-CCO34_RS00580;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=CCO34_RS00580;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 101241 102395 . + . ID=gene-CCO34_RS00590;Name=CCO34_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00590;old_locus_tag=CCO34_00590 NZ_NPMD01000001.1 Protein Homology CDS 101241 102395 . + 0 ID=cds-WP_079973028.1;Parent=gene-CCO34_RS00590;Dbxref=GenBank:WP_079973028.1;Name=WP_079973028.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=CCO34_RS00590;product=methyl-accepting chemotaxis protein;protein_id=WP_079973028.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 102541 103524 . + . ID=gene-CCO34_RS00595;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=CCO34_RS00595;old_locus_tag=CCO34_00595 NZ_NPMD01000001.1 Protein Homology CDS 102541 103524 . + 0 ID=cds-WP_000387373.1;Parent=gene-CCO34_RS00595;Dbxref=GenBank:WP_000387373.1;Name=WP_000387373.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=CCO34_RS00595;product=zinc transporter ZntB;protein_id=WP_000387373.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 103800 103982 . + . ID=gene-CCO34_RS26125;Name=CCO34_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26125;old_locus_tag=CCO34_00600 NZ_NPMD01000001.1 Protein Homology CDS 103800 103982 . + 0 ID=cds-WP_001750081.1;Parent=gene-CCO34_RS26125;Dbxref=GenBank:WP_001750081.1;Name=WP_001750081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048180.1;locus_tag=CCO34_RS26125;product=hypothetical protein;protein_id=WP_001750081.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 104011 105384 . + . ID=gene-CCO34_RS00605;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=CCO34_RS00605;old_locus_tag=CCO34_00605 NZ_NPMD01000001.1 Protein Homology CDS 104011 105384 . + 0 ID=cds-WP_000123685.1;Parent=gene-CCO34_RS00605;Dbxref=GenBank:WP_000123685.1;Name=WP_000123685.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=CCO34_RS00605;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123685.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 105428 106363 . - . ID=gene-CCO34_RS00610;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=CCO34_RS00610;old_locus_tag=CCO34_00610 NZ_NPMD01000001.1 Protein Homology CDS 105428 106363 . - 0 ID=cds-WP_001156208.1;Parent=gene-CCO34_RS00610;Dbxref=GenBank:WP_001156208.1;Name=WP_001156208.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=CCO34_RS00610;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001156208.1;transl_table=11 NZ_NPMD01000001.1 RefSeq pseudogene 106415 106618 . - . ID=gene-CCO34_RS00615;Name=CCO34_RS00615;end_range=106618,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS00615;old_locus_tag=CCO34_00615;partial=true;pseudo=true NZ_NPMD01000001.1 Protein Homology CDS 106415 106618 . - 0 ID=cds-CCO34_RS00615;Parent=gene-CCO34_RS00615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=106618,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=CCO34_RS00615;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 106574 106726 . + . ID=gene-CCO34_RS26075;Name=CCO34_RS26075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26075;old_locus_tag=CCO34_00620 NZ_NPMD01000001.1 Protein Homology CDS 106574 106726 . + 0 ID=cds-WP_000089153.1;Parent=gene-CCO34_RS26075;Dbxref=GenBank:WP_000089153.1;Name=WP_000089153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465579.1;locus_tag=CCO34_RS26075;product=hypothetical protein;protein_id=WP_000089153.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 106719 107057 . + . ID=gene-CCO34_RS00625;Name=CCO34_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00625;old_locus_tag=CCO34_00625 NZ_NPMD01000001.1 Protein Homology CDS 106719 107057 . + 0 ID=cds-WP_000159242.1;Parent=gene-CCO34_RS00625;Dbxref=GenBank:WP_000159242.1;Name=WP_000159242.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=CCO34_RS00625;product=SMR family transporter;protein_id=WP_000159242.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 107107 107541 . - . ID=gene-CCO34_RS00630;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=CCO34_RS00630;old_locus_tag=CCO34_00630 NZ_NPMD01000001.1 Protein Homology CDS 107107 107541 . - 0 ID=cds-WP_001082296.1;Parent=gene-CCO34_RS00630;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=CCO34_RS00630;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 108023 111547 . - . ID=gene-CCO34_RS00640;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=CCO34_RS00640;old_locus_tag=CCO34_00640 NZ_NPMD01000001.1 Protein Homology CDS 108023 111547 . - 0 ID=cds-WP_001193248.1;Parent=gene-CCO34_RS00640;Dbxref=GenBank:WP_001193248.1;Name=WP_001193248.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=CCO34_RS00640;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_001193248.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 111608 111907 . - . ID=gene-CCO34_RS00645;Name=CCO34_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00645;old_locus_tag=CCO34_00645 NZ_NPMD01000001.1 Protein Homology CDS 111608 111907 . - 0 ID=cds-WP_001137722.1;Parent=gene-CCO34_RS00645;Dbxref=GenBank:WP_001137722.1;Name=WP_001137722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=CCO34_RS00645;product=hypothetical protein;protein_id=WP_001137722.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 111823 112089 . + . ID=gene-CCO34_RS00650;Name=CCO34_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00650;old_locus_tag=CCO34_00650 NZ_NPMD01000001.1 Protein Homology CDS 111823 112089 . + 0 ID=cds-WP_001200680.1;Parent=gene-CCO34_RS00650;Dbxref=GenBank:WP_001200680.1;Name=WP_001200680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=CCO34_RS00650;product=putative hemolysin;protein_id=WP_001200680.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 112133 112543 . - . ID=gene-CCO34_RS00655;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=CCO34_RS00655;old_locus_tag=CCO34_00655 NZ_NPMD01000001.1 Protein Homology CDS 112133 112543 . - 0 ID=cds-WP_000725242.1;Parent=gene-CCO34_RS00655;Dbxref=GenBank:WP_000725242.1;Name=WP_000725242.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=CCO34_RS00655;product=heat shock protein HslJ;protein_id=WP_000725242.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 112654 113643 . - . ID=gene-CCO34_RS00660;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=CCO34_RS00660;old_locus_tag=CCO34_00660 NZ_NPMD01000001.1 Protein Homology CDS 112654 113643 . - 0 ID=cds-WP_000762206.1;Parent=gene-CCO34_RS00660;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=CCO34_RS00660;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 113883 116519 . + . ID=gene-CCO34_RS00665;Name=CCO34_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00665;old_locus_tag=CCO34_00665 NZ_NPMD01000001.1 Protein Homology CDS 113883 116519 . + 0 ID=cds-WP_000677016.1;Parent=gene-CCO34_RS00665;Dbxref=GenBank:WP_000677016.1;Name=WP_000677016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=CCO34_RS00665;product=YdbH family protein;protein_id=WP_000677016.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 116519 116710 . + . ID=gene-CCO34_RS00670;Name=CCO34_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00670;old_locus_tag=CCO34_00670 NZ_NPMD01000001.1 Protein Homology CDS 116519 116710 . + 0 ID=cds-WP_000784063.1;Parent=gene-CCO34_RS00670;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=CCO34_RS00670;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 116718 117041 . + . ID=gene-CCO34_RS00675;Name=CCO34_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00675;old_locus_tag=CCO34_00675 NZ_NPMD01000001.1 Protein Homology CDS 116718 117041 . + 0 ID=cds-WP_000760345.1;Parent=gene-CCO34_RS00675;Dbxref=GenBank:WP_000760345.1;Name=WP_000760345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=CCO34_RS00675;product=YdbL family protein;protein_id=WP_000760345.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 117184 117633 . + . ID=gene-CCO34_RS00680;Name=CCO34_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00680;old_locus_tag=CCO34_00680 NZ_NPMD01000001.1 Protein Homology CDS 117184 117633 . + 0 ID=cds-WP_001531579.1;Parent=gene-CCO34_RS00680;Dbxref=GenBank:WP_001531579.1;Name=WP_001531579.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=CCO34_RS00680;product=GFA family protein;protein_id=WP_001531579.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 117630 118235 . - . ID=gene-CCO34_RS00685;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=CCO34_RS00685;old_locus_tag=CCO34_00685 NZ_NPMD01000001.1 Protein Homology CDS 117630 118235 . - 0 ID=cds-WP_000048926.1;Parent=gene-CCO34_RS00685;Dbxref=GenBank:WP_000048926.1;Name=WP_000048926.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=CCO34_RS00685;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048926.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 118436 122338 . + . ID=gene-CCO34_RS00690;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=CCO34_RS00690;old_locus_tag=CCO34_00690 NZ_NPMD01000001.1 Protein Homology CDS 118436 122338 . + 0 ID=cds-WP_024133307.1;Parent=gene-CCO34_RS00690;Dbxref=GenBank:WP_024133307.1;Name=WP_024133307.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=CCO34_RS00690;product=ATP-dependent RNA helicase HrpA;protein_id=WP_024133307.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 122402 123202 . + . ID=gene-CCO34_RS00695;Name=CCO34_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00695;old_locus_tag=CCO34_00695 NZ_NPMD01000001.1 Protein Homology CDS 122402 123202 . + 0 ID=cds-WP_001098517.1;Parent=gene-CCO34_RS00695;Dbxref=GenBank:WP_001098517.1;Name=WP_001098517.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=CCO34_RS00695;product=YdcF family protein;protein_id=WP_001098517.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 123319 123849 . + . ID=gene-CCO34_RS00700;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=CCO34_RS00700;old_locus_tag=CCO34_00700 NZ_NPMD01000001.1 Protein Homology CDS 123319 123849 . + 0 ID=cds-WP_000527273.1;Parent=gene-CCO34_RS00700;Dbxref=GenBank:WP_000527273.1;Name=WP_000527273.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=CCO34_RS00700;product=cytochrome b561;protein_id=WP_000527273.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 124121 124783 . - . ID=gene-CCO34_RS00705;Name=CCO34_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00705;old_locus_tag=CCO34_00705 NZ_NPMD01000001.1 Protein Homology CDS 124121 124783 . - 0 ID=cds-WP_001520112.1;Parent=gene-CCO34_RS00705;Dbxref=GenBank:WP_001520112.1;Name=WP_001520112.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=CCO34_RS00705;product=class I SAM-dependent methyltransferase;protein_id=WP_001520112.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 125247 126797 . - . ID=gene-CCO34_RS00710;Name=CCO34_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00710;old_locus_tag=CCO34_00710 NZ_NPMD01000001.1 Protein Homology CDS 125247 126797 . - 0 ID=cds-WP_001535151.1;Parent=gene-CCO34_RS00710;Dbxref=GenBank:WP_001535151.1;Name=WP_001535151.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=CCO34_RS00710;product=glycosyltransferase family 39 protein;protein_id=WP_001535151.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 126934 127614 . - . ID=gene-CCO34_RS00715;Name=CCO34_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00715;old_locus_tag=CCO34_00715 NZ_NPMD01000001.1 Protein Homology CDS 126934 127614 . - 0 ID=cds-WP_000560166.1;Parent=gene-CCO34_RS00715;Dbxref=GenBank:WP_000560166.1;Name=WP_000560166.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=CCO34_RS00715;product=amino acid ABC transporter permease;protein_id=WP_000560166.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 127611 128342 . - . ID=gene-CCO34_RS00720;Name=CCO34_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00720;old_locus_tag=CCO34_00720 NZ_NPMD01000001.1 Protein Homology CDS 127611 128342 . - 0 ID=cds-WP_001196340.1;Parent=gene-CCO34_RS00720;Dbxref=GenBank:WP_001196340.1;Name=WP_001196340.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=CCO34_RS00720;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001196340.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 128367 129014 . - . ID=gene-CCO34_RS00725;Name=CCO34_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00725;old_locus_tag=CCO34_00725 NZ_NPMD01000001.1 Protein Homology CDS 128367 129014 . - 0 ID=cds-WP_000094446.1;Parent=gene-CCO34_RS00725;Dbxref=GenBank:WP_000094446.1;Name=WP_000094446.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=CCO34_RS00725;product=amino acid ABC transporter permease;protein_id=WP_000094446.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 129021 129782 . - . ID=gene-CCO34_RS00730;Name=CCO34_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00730;old_locus_tag=CCO34_00730 NZ_NPMD01000001.1 Protein Homology CDS 129021 129782 . - 0 ID=cds-WP_000949370.1;Parent=gene-CCO34_RS00730;Dbxref=GenBank:WP_000949370.1;Name=WP_000949370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=CCO34_RS00730;product=transporter substrate-binding domain-containing protein;protein_id=WP_000949370.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 130689 131033 . + . ID=gene-CCO34_RS00735;Name=CCO34_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00735;old_locus_tag=CCO34_00735 NZ_NPMD01000001.1 Protein Homology CDS 130689 131033 . + 0 ID=cds-WP_000281185.1;Parent=gene-CCO34_RS00735;Dbxref=GenBank:WP_000281185.1;Name=WP_000281185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=CCO34_RS00735;product=DUF1294 domain-containing protein;protein_id=WP_000281185.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 131154 132380 . - . ID=gene-CCO34_RS00740;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=CCO34_RS00740;old_locus_tag=CCO34_00740 NZ_NPMD01000001.1 Protein Homology CDS 131154 132380 . - 0 ID=cds-WP_001131425.1;Parent=gene-CCO34_RS00740;Dbxref=GenBank:WP_001131425.1;Name=WP_001131425.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=CCO34_RS00740;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_001131425.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 132806 133522 . + . ID=gene-CCO34_RS00745;Name=CCO34_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00745;old_locus_tag=CCO34_00745 NZ_NPMD01000001.1 Protein Homology CDS 132806 133522 . + 0 ID=cds-WP_000997196.1;Parent=gene-CCO34_RS00745;Dbxref=GenBank:WP_000997196.1;Name=WP_000997196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=CCO34_RS00745;product=membrane protein;protein_id=WP_000997196.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 133651 134052 . - . ID=gene-CCO34_RS00750;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=CCO34_RS00750;old_locus_tag=CCO34_00750 NZ_NPMD01000001.1 Protein Homology CDS 133651 134052 . - 0 ID=cds-WP_001540100.1;Parent=gene-CCO34_RS00750;Dbxref=GenBank:WP_001540100.1;Name=WP_001540100.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=CCO34_RS00750;product=type III secretion system effector SteB;protein_id=WP_001540100.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 134575 134850 . + . ID=gene-CCO34_RS00755;Name=CCO34_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00755;old_locus_tag=CCO34_00755 NZ_NPMD01000001.1 Protein Homology CDS 134575 134850 . + 0 ID=cds-WP_001120770.1;Parent=gene-CCO34_RS00755;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=CCO34_RS00755;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 134882 136000 . + . ID=gene-CCO34_RS00760;Name=CCO34_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00760;old_locus_tag=CCO34_00760 NZ_NPMD01000001.1 Protein Homology CDS 134882 136000 . + 0 ID=cds-WP_000842141.1;Parent=gene-CCO34_RS00760;Dbxref=GenBank:WP_000842141.1;Name=WP_000842141.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=CCO34_RS00760;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842141.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 136169 137794 . + . ID=gene-CCO34_RS00770;Name=CCO34_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00770;old_locus_tag=CCO34_00770 NZ_NPMD01000001.1 Protein Homology CDS 136169 137794 . + 0 ID=cds-WP_000528480.1;Parent=gene-CCO34_RS00770;Dbxref=GenBank:WP_000528480.1;Name=WP_000528480.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=CCO34_RS00770;product=methyl-accepting chemotaxis protein;protein_id=WP_000528480.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 137855 138778 . - . ID=gene-CCO34_RS00775;Name=CCO34_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00775;old_locus_tag=CCO34_00775 NZ_NPMD01000001.1 Protein Homology CDS 137855 138778 . - 0 ID=cds-WP_000414259.1;Parent=gene-CCO34_RS00775;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=CCO34_RS00775;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 139071 140414 . + . ID=gene-CCO34_RS00780;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=CCO34_RS00780;old_locus_tag=CCO34_00780 NZ_NPMD01000001.1 Protein Homology CDS 139071 140414 . + 0 ID=cds-WP_000024092.1;Parent=gene-CCO34_RS00780;Dbxref=GenBank:WP_000024092.1;Name=WP_000024092.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=CCO34_RS00780;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000024092.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 140463 141971 . + . ID=gene-CCO34_RS00785;Name=CCO34_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00785;old_locus_tag=CCO34_00785 NZ_NPMD01000001.1 Protein Homology CDS 140463 141971 . + 0 ID=cds-WP_000933978.1;Parent=gene-CCO34_RS00785;Dbxref=GenBank:WP_000933978.1;Name=WP_000933978.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=CCO34_RS00785;product=carboxylesterase/lipase family protein;protein_id=WP_000933978.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 142191 143846 . + . ID=gene-CCO34_RS00790;Name=CCO34_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00790;old_locus_tag=CCO34_00790 NZ_NPMD01000001.1 Protein Homology CDS 142191 143846 . + 0 ID=cds-WP_080180971.1;Parent=gene-CCO34_RS00790;Dbxref=GenBank:WP_080180971.1;Name=WP_080180971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=CCO34_RS00790;product=glucan biosynthesis protein D;protein_id=WP_080180971.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 144042 144617 . + . ID=gene-CCO34_RS00795;Name=CCO34_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00795;old_locus_tag=CCO34_00795 NZ_NPMD01000001.1 Protein Homology CDS 144042 144617 . + 0 ID=cds-WP_001024310.1;Parent=gene-CCO34_RS00795;Dbxref=GenBank:WP_001024310.1;Name=WP_001024310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=CCO34_RS00795;product=YceI family protein;protein_id=WP_001024310.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 144629 145831 . + . ID=gene-CCO34_RS00800;Name=CCO34_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00800;old_locus_tag=CCO34_00800 NZ_NPMD01000001.1 Protein Homology CDS 144629 145831 . + 0 ID=cds-WP_000848079.1;Parent=gene-CCO34_RS00800;Dbxref=GenBank:WP_000848079.1;Name=WP_000848079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=CCO34_RS00800;product=lactate oxidase;protein_id=WP_000848079.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 145878 146315 . - . ID=gene-CCO34_RS00805;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=CCO34_RS00805;old_locus_tag=CCO34_00805 NZ_NPMD01000001.1 Protein Homology CDS 145878 146315 . - 0 ID=cds-WP_000354853.1;Parent=gene-CCO34_RS00805;Dbxref=GenBank:WP_000354853.1;Name=WP_000354853.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=CCO34_RS00805;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_000354853.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 146315 147106 . - . ID=gene-CCO34_RS00810;Name=CCO34_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00810;old_locus_tag=CCO34_00810 NZ_NPMD01000001.1 Protein Homology CDS 146315 147106 . - 0 ID=cds-WP_001670738.1;Parent=gene-CCO34_RS00810;Dbxref=GenBank:WP_001670738.1;Name=WP_001670738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=CCO34_RS00810;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001670738.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 147122 147754 . - . ID=gene-CCO34_RS00815;Name=CCO34_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00815;old_locus_tag=CCO34_00815 NZ_NPMD01000001.1 Protein Homology CDS 147122 147754 . - 0 ID=cds-WP_000600596.1;Parent=gene-CCO34_RS00815;Dbxref=GenBank:WP_000600596.1;Name=WP_000600596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=CCO34_RS00815;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600596.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 147766 148203 . - . ID=gene-CCO34_RS00820;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=CCO34_RS00820;old_locus_tag=CCO34_00820 NZ_NPMD01000001.1 Protein Homology CDS 147766 148203 . - 0 ID=cds-WP_000606458.1;Parent=gene-CCO34_RS00820;Dbxref=GenBank:WP_000606458.1;Name=WP_000606458.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=CCO34_RS00820;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606458.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 148335 149141 . - . ID=gene-CCO34_RS00825;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=CCO34_RS00825;old_locus_tag=CCO34_00825 NZ_NPMD01000001.1 Protein Homology CDS 148335 149141 . - 0 ID=cds-WP_000118619.1;Parent=gene-CCO34_RS00825;Dbxref=GenBank:WP_000118619.1;Name=WP_000118619.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=CCO34_RS00825;product=BtpA family protein SgcQ;protein_id=WP_000118619.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 149155 150468 . - . ID=gene-CCO34_RS00830;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=CCO34_RS00830;old_locus_tag=CCO34_00830 NZ_NPMD01000001.1 Protein Homology CDS 149155 150468 . - 0 ID=cds-WP_000460835.1;Parent=gene-CCO34_RS00830;Dbxref=GenBank:WP_000460835.1;Name=WP_000460835.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=CCO34_RS00830;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_000460835.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 150479 150760 . - . ID=gene-CCO34_RS00835;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=CCO34_RS00835;old_locus_tag=CCO34_00835 NZ_NPMD01000001.1 Protein Homology CDS 150479 150760 . - 0 ID=cds-WP_000976132.1;Parent=gene-CCO34_RS00835;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=CCO34_RS00835;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 150757 151875 . - . ID=gene-CCO34_RS00840;Name=CCO34_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00840;old_locus_tag=CCO34_00840 NZ_NPMD01000001.1 Protein Homology CDS 150757 151875 . - 0 ID=cds-WP_000144629.1;Parent=gene-CCO34_RS00840;Dbxref=GenBank:WP_000144629.1;Name=WP_000144629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=CCO34_RS00840;product=M42 family metallopeptidase;protein_id=WP_000144629.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 152092 152631 . + . ID=gene-CCO34_RS00845;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=CCO34_RS00845;old_locus_tag=CCO34_00845 NZ_NPMD01000001.1 Protein Homology CDS 152092 152631 . + 0 ID=cds-WP_000229295.1;Parent=gene-CCO34_RS00845;Dbxref=GenBank:WP_000229295.1;Name=WP_000229295.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=CCO34_RS00845;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229295.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 152628 153608 . - . ID=gene-CCO34_RS00850;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=CCO34_RS00850;old_locus_tag=CCO34_00850 NZ_NPMD01000001.1 Protein Homology CDS 152628 153608 . - 0 ID=cds-WP_023228727.1;Parent=gene-CCO34_RS00850;Dbxref=GenBank:WP_023228727.1;Name=WP_023228727.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=CCO34_RS00850;product=YdcK family protein;protein_id=WP_023228727.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 153715 154728 . + . ID=gene-CCO34_RS00855;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=CCO34_RS00855;old_locus_tag=CCO34_00855 NZ_NPMD01000001.1 Protein Homology CDS 153715 154728 . + 0 ID=cds-WP_001244002.1;Parent=gene-CCO34_RS00855;Dbxref=GenBank:WP_001244002.1;Name=WP_001244002.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=CCO34_RS00855;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001244002.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 154715 155311 . + . ID=gene-CCO34_RS00860;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=CCO34_RS00860;old_locus_tag=CCO34_00860 NZ_NPMD01000001.1 Protein Homology CDS 154715 155311 . + 0 ID=cds-WP_000218280.1;Parent=gene-CCO34_RS00860;Dbxref=GenBank:WP_000218280.1;Name=WP_000218280.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=CCO34_RS00860;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218280.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 155467 156135 . + . ID=gene-CCO34_RS00865;Name=CCO34_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00865;old_locus_tag=CCO34_00865 NZ_NPMD01000001.1 Protein Homology CDS 155467 156135 . + 0 ID=cds-WP_001259023.1;Parent=gene-CCO34_RS00865;Dbxref=GenBank:WP_001259023.1;Name=WP_001259023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=CCO34_RS00865;product=DUF3313 domain-containing protein;protein_id=WP_001259023.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 156189 157367 . - . ID=gene-CCO34_RS00870;Name=CCO34_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00870;old_locus_tag=CCO34_00870 NZ_NPMD01000001.1 Protein Homology CDS 156189 157367 . - 0 ID=cds-WP_001238501.1;Parent=gene-CCO34_RS00870;Dbxref=GenBank:WP_001238501.1;Name=WP_001238501.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=CCO34_RS00870;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_001238501.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 157460 157996 . + . ID=gene-CCO34_RS00875;Name=CCO34_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00875;old_locus_tag=CCO34_00875 NZ_NPMD01000001.1 Protein Homology CDS 157460 157996 . + 0 ID=cds-WP_000369537.1;Parent=gene-CCO34_RS00875;Dbxref=GenBank:WP_000369537.1;Name=WP_000369537.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=CCO34_RS00875;product=helix-turn-helix domain-containing protein;protein_id=WP_000369537.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 158075 160039 . + . ID=gene-CCO34_RS00880;Name=CCO34_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00880;old_locus_tag=CCO34_00880 NZ_NPMD01000001.1 Protein Homology CDS 158075 160039 . + 0 ID=cds-WP_001249762.1;Parent=gene-CCO34_RS00880;Dbxref=GenBank:WP_001249762.1;Name=WP_001249762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=CCO34_RS00880;product=peptidase U32 family protein;protein_id=WP_001249762.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 160040 160270 . - . ID=gene-CCO34_RS00885;Name=CCO34_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00885;old_locus_tag=CCO34_00885 NZ_NPMD01000001.1 Protein Homology CDS 160040 160270 . - 0 ID=cds-WP_000956438.1;Parent=gene-CCO34_RS00885;Dbxref=GenBank:WP_000956438.1;Name=WP_000956438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=CCO34_RS00885;product=DUF2554 family protein;protein_id=WP_000956438.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 160544 161494 . - . ID=gene-CCO34_RS00890;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=CCO34_RS00890;old_locus_tag=CCO34_00890 NZ_NPMD01000001.1 Protein Homology CDS 160544 161494 . - 0 ID=cds-WP_001122922.1;Parent=gene-CCO34_RS00890;Dbxref=GenBank:WP_001122922.1;Name=WP_001122922.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=CCO34_RS00890;product=SPI-2 type III secretion system effector SifB;protein_id=WP_001122922.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 162031 162429 . + . ID=gene-CCO34_RS00895;Name=CCO34_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00895;old_locus_tag=CCO34_00895 NZ_NPMD01000001.1 Protein Homology CDS 162031 162429 . + 0 ID=cds-WP_000747895.1;Parent=gene-CCO34_RS00895;Dbxref=GenBank:WP_000747895.1;Name=WP_000747895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=CCO34_RS00895;product=hypothetical protein;protein_id=WP_000747895.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 162462 162692 . + . ID=gene-CCO34_RS00900;Name=CCO34_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00900;old_locus_tag=CCO34_00900 NZ_NPMD01000001.1 Protein Homology CDS 162462 162692 . + 0 ID=cds-WP_001597849.1;Parent=gene-CCO34_RS00900;Dbxref=GenBank:WP_001597849.1;Name=WP_001597849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=CCO34_RS00900;product=hypothetical protein;protein_id=WP_001597849.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 162951 163721 . + . ID=gene-CCO34_RS00905;Name=CCO34_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00905;old_locus_tag=CCO34_00905 NZ_NPMD01000001.1 Protein Homology CDS 162951 163721 . + 0 ID=cds-WP_000237714.1;Parent=gene-CCO34_RS00905;Dbxref=GenBank:WP_000237714.1;Name=WP_000237714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=CCO34_RS00905;product=M15 family metallopeptidase;protein_id=WP_000237714.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 163857 165281 . + . ID=gene-CCO34_RS00910;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=CCO34_RS00910;old_locus_tag=CCO34_00910 NZ_NPMD01000001.1 Protein Homology CDS 163857 165281 . + 0 ID=cds-WP_000760692.1;Parent=gene-CCO34_RS00910;Dbxref=GenBank:WP_000760692.1;Name=WP_000760692.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=CCO34_RS00910;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760692.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 165396 166841 . + . ID=gene-CCO34_RS00915;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=CCO34_RS00915;old_locus_tag=CCO34_00915 NZ_NPMD01000001.1 Protein Homology CDS 165396 166841 . + 0 ID=cds-WP_000158093.1;Parent=gene-CCO34_RS00915;Dbxref=GenBank:WP_000158093.1;Name=WP_000158093.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=CCO34_RS00915;product=aminobutyraldehyde dehydrogenase;protein_id=WP_000158093.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 166946 167041 . - . ID=gene-CCO34_RS00920;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=CCO34_RS00920;old_locus_tag=CCO34_00920 NZ_NPMD01000001.1 Protein Homology CDS 166946 167041 . - 0 ID=cds-WP_001103198.1;Parent=gene-CCO34_RS00920;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=CCO34_RS00920;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 167240 167413 . + . ID=gene-CCO34_RS00925;Name=CCO34_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00925;old_locus_tag=CCO34_00925 NZ_NPMD01000001.1 Protein Homology CDS 167240 167413 . + 0 ID=cds-WP_000171943.1;Parent=gene-CCO34_RS00925;Dbxref=GenBank:WP_000171943.1;Name=WP_000171943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=CCO34_RS00925;product=GhoT/OrtT family toxin;protein_id=WP_000171943.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 167458 169602 . - . ID=gene-CCO34_RS00930;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=CCO34_RS00930;old_locus_tag=CCO34_00930 NZ_NPMD01000001.1 Protein Homology CDS 167458 169602 . - 0 ID=cds-WP_000165616.1;Parent=gene-CCO34_RS00930;Dbxref=GenBank:WP_000165616.1;Name=WP_000165616.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=CCO34_RS00930;product=virulence-associated effector SrfC;protein_id=WP_000165616.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 169599 172580 . - . ID=gene-CCO34_RS00935;Name=CCO34_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00935;old_locus_tag=CCO34_00935 NZ_NPMD01000001.1 Protein Homology CDS 169599 172580 . - 0 ID=cds-WP_000960825.1;Parent=gene-CCO34_RS00935;Dbxref=GenBank:WP_000960825.1;Name=WP_000960825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=CCO34_RS00935;product=virulence factor SrfB;protein_id=WP_000960825.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 172585 173910 . - . ID=gene-CCO34_RS00940;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=CCO34_RS00940;old_locus_tag=CCO34_00940 NZ_NPMD01000001.1 Protein Homology CDS 172585 173910 . - 0 ID=cds-WP_001129962.1;Parent=gene-CCO34_RS00940;Dbxref=GenBank:WP_001129962.1;Name=WP_001129962.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=CCO34_RS00940;product=virulence-associated effector SrfA;protein_id=WP_001129962.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 174134 174367 . + . ID=gene-CCO34_RS00945;Name=CCO34_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00945;old_locus_tag=CCO34_00945 NZ_NPMD01000001.1 Protein Homology CDS 174134 174367 . + 0 ID=cds-WP_000018720.1;Parent=gene-CCO34_RS00945;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=CCO34_RS00945;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 174372 174821 . - . ID=gene-CCO34_RS00950;Name=CCO34_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00950;old_locus_tag=CCO34_00950 NZ_NPMD01000001.1 Protein Homology CDS 174372 174821 . - 0 ID=cds-WP_001076565.1;Parent=gene-CCO34_RS00950;Dbxref=GenBank:WP_001076565.1;Name=WP_001076565.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=CCO34_RS00950;product=DMT family transporter;protein_id=WP_001076565.1;transl_table=11 NZ_NPMD01000001.1 RefSeq pseudogene 174821 175319 . - . ID=gene-CCO34_RS00955;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=pseudogene;locus_tag=CCO34_RS00955;old_locus_tag=CCO34_00955;pseudo=true NZ_NPMD01000001.1 Protein Homology CDS 174821 175319 . - 0 ID=cds-CCO34_RS00955;Parent=gene-CCO34_RS00955;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol%3B frameshifted;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=CCO34_RS00955;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;pseudo=true;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 175531 176568 . + . ID=gene-CCO34_RS00960;Name=CCO34_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00960;old_locus_tag=CCO34_00960 NZ_NPMD01000001.1 Protein Homology CDS 175531 176568 . + 0 ID=cds-WP_001522633.1;Parent=gene-CCO34_RS00960;Dbxref=GenBank:WP_001522633.1;Name=WP_001522633.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=CCO34_RS00960;product=NADP-dependent oxidoreductase;protein_id=WP_001522633.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 176901 177566 . + . ID=gene-CCO34_RS00965;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=CCO34_RS00965;old_locus_tag=CCO34_00965 NZ_NPMD01000001.1 Protein Homology CDS 176901 177566 . + 0 ID=cds-WP_001119592.1;Parent=gene-CCO34_RS00965;Dbxref=GenBank:WP_001119592.1;Name=WP_001119592.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=CCO34_RS00965;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001119592.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 177622 179742 . - . ID=gene-CCO34_RS00970;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=CCO34_RS00970;old_locus_tag=CCO34_00970 NZ_NPMD01000001.1 Protein Homology CDS 177622 179742 . - 0 ID=cds-WP_023244162.1;Parent=gene-CCO34_RS00970;Dbxref=GenBank:WP_023244162.1;Name=WP_023244162.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=CCO34_RS00970;product=TonB-dependent receptor PqqU;protein_id=WP_023244162.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 180006 181067 . + . ID=gene-CCO34_RS00975;Name=CCO34_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00975;old_locus_tag=CCO34_00975 NZ_NPMD01000001.1 Protein Homology CDS 180006 181067 . + 0 ID=cds-WP_023243658.1;Parent=gene-CCO34_RS00975;Dbxref=GenBank:WP_023243658.1;Name=WP_023243658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=CCO34_RS00975;product=YncE family protein;protein_id=WP_023243658.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 181212 181433 . + . ID=gene-CCO34_RS00980;Name=CCO34_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS00980;old_locus_tag=CCO34_00980 NZ_NPMD01000001.1 Protein Homology CDS 181212 181433 . + 0 ID=cds-WP_000732362.1;Parent=gene-CCO34_RS00980;Dbxref=GenBank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=CCO34_RS00980;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 181510 183003 . - . ID=gene-CCO34_RS00985;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=CCO34_RS00985;old_locus_tag=CCO34_00985 NZ_NPMD01000001.1 Protein Homology CDS 181510 183003 . - 0 ID=cds-WP_000857111.1;Parent=gene-CCO34_RS00985;Dbxref=GenBank:WP_000857111.1;Name=WP_000857111.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=CCO34_RS00985;product=L-asparagine permease;protein_id=WP_000857111.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 183516 184148 . + . ID=gene-CCO34_RS00995;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=CCO34_RS00995;old_locus_tag=CCO34_00995 NZ_NPMD01000001.1 Protein Homology CDS 183516 184148 . + 0 ID=cds-WP_001147134.1;Parent=gene-CCO34_RS00995;Dbxref=GenBank:WP_001147134.1;Name=WP_001147134.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=CCO34_RS00995;product=type III secretion system effector SteA;protein_id=WP_001147134.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 184432 185277 . + . ID=gene-CCO34_RS01000;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=CCO34_RS01000;old_locus_tag=CCO34_01000 NZ_NPMD01000001.1 Protein Homology CDS 184432 185277 . + 0 ID=cds-WP_000200329.1;Parent=gene-CCO34_RS01000;Dbxref=GenBank:WP_000200329.1;Name=WP_000200329.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=CCO34_RS01000;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000200329.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 185313 186206 . - . ID=gene-CCO34_RS01005;Name=CCO34_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01005;old_locus_tag=CCO34_01005 NZ_NPMD01000001.1 Protein Homology CDS 185313 186206 . - 0 ID=cds-WP_000804283.1;Parent=gene-CCO34_RS01005;Dbxref=GenBank:WP_000804283.1;Name=WP_000804283.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=CCO34_RS01005;product=PhzF family isomerase;protein_id=WP_000804283.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 186312 186992 . - . ID=gene-CCO34_RS01010;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO34_RS01010;old_locus_tag=CCO34_01010 NZ_NPMD01000001.1 Protein Homology CDS 186312 186992 . - 0 ID=cds-WP_000617106.1;Parent=gene-CCO34_RS01010;Dbxref=GenBank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=CCO34_RS01010;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 186989 187684 . - . ID=gene-CCO34_RS01015;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=CCO34_RS01015;old_locus_tag=CCO34_01015 NZ_NPMD01000001.1 Protein Homology CDS 186989 187684 . - 0 ID=cds-WP_023200721.1;Parent=gene-CCO34_RS01015;Dbxref=GenBank:WP_023200721.1;Name=WP_023200721.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=CCO34_RS01015;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_023200721.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 187684 189228 . - . ID=gene-CCO34_RS01020;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO34_RS01020;old_locus_tag=CCO34_01020 NZ_NPMD01000001.1 Protein Homology CDS 187684 189228 . - 0 ID=cds-WP_000702595.1;Parent=gene-CCO34_RS01020;Dbxref=GenBank:WP_000702595.1;Name=WP_000702595.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=CCO34_RS01020;product=nitrate reductase subunit beta;protein_id=WP_000702595.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 189225 192965 . - . ID=gene-CCO34_RS01025;Name=CCO34_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01025;old_locus_tag=CCO34_01025 NZ_NPMD01000001.1 Protein Homology CDS 189225 192965 . - 0 ID=cds-WP_000040394.1;Parent=gene-CCO34_RS01025;Dbxref=GenBank:WP_000040394.1;Name=WP_000040394.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=CCO34_RS01025;product=nitrate reductase subunit alpha;protein_id=WP_000040394.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 193057 194445 . - . ID=gene-CCO34_RS01030;Name=CCO34_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01030;old_locus_tag=CCO34_01030 NZ_NPMD01000001.1 Protein Homology CDS 193057 194445 . - 0 ID=cds-WP_000198250.1;Parent=gene-CCO34_RS01030;Dbxref=GenBank:WP_000198250.1;Name=WP_000198250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=CCO34_RS01030;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_000198250.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 194659 195237 . - . ID=gene-CCO34_RS01035;Name=CCO34_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01035;old_locus_tag=CCO34_01035 NZ_NPMD01000001.1 Protein Homology CDS 194659 195237 . - 0 ID=cds-WP_000121038.1;Parent=gene-CCO34_RS01035;Dbxref=GenBank:WP_000121038.1;Name=WP_000121038.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=CCO34_RS01035;product=TetR family transcriptional regulator;protein_id=WP_000121038.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 195355 196842 . + . ID=gene-CCO34_RS01040;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=CCO34_RS01040;old_locus_tag=CCO34_01040 NZ_NPMD01000001.1 Protein Homology CDS 195355 196842 . + 0 ID=cds-WP_000489730.1;Parent=gene-CCO34_RS01040;Dbxref=GenBank:WP_000489730.1;Name=WP_000489730.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=CCO34_RS01040;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489730.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 196867 197247 . - . ID=gene-CCO34_RS01045;Name=CCO34_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01045;old_locus_tag=CCO34_01045 NZ_NPMD01000001.1 Protein Homology CDS 196867 197247 . - 0 ID=cds-WP_014343841.1;Parent=gene-CCO34_RS01045;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=CCO34_RS01045;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 197391 198473 . - . ID=gene-CCO34_RS01050;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=CCO34_RS01050;old_locus_tag=CCO34_01050 NZ_NPMD01000001.1 Protein Homology CDS 197391 198473 . - 0 ID=cds-WP_000769043.1;Parent=gene-CCO34_RS01050;Dbxref=GenBank:WP_000769043.1;Name=WP_000769043.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=CCO34_RS01050;product=porin OmpD;protein_id=WP_000769043.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 198998 199879 . - . ID=gene-CCO34_RS01060;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=CCO34_RS01060;old_locus_tag=CCO34_01060 NZ_NPMD01000001.1 Protein Homology CDS 198998 199879 . - 0 ID=cds-WP_000203799.1;Parent=gene-CCO34_RS01060;Dbxref=GenBank:WP_000203799.1;Name=WP_000203799.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=CCO34_RS01060;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000203799.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 200157 203204 . + . ID=gene-CCO34_RS01070;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO34_RS01070;old_locus_tag=CCO34_01070 NZ_NPMD01000001.1 Protein Homology CDS 200157 203204 . + 0 ID=cds-WP_001540039.1;Parent=gene-CCO34_RS01070;Dbxref=GenBank:WP_001540039.1;Name=WP_001540039.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=CCO34_RS01070;product=formate dehydrogenase-N subunit alpha;protein_id=WP_001540039.1;transl_except=(pos:200742..200744%2Caa:Sec);transl_table=11 NZ_NPMD01000001.1 RefSeq gene 203218 204102 . + . ID=gene-CCO34_RS01075;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO34_RS01075;old_locus_tag=CCO34_01075 NZ_NPMD01000001.1 Protein Homology CDS 203218 204102 . + 0 ID=cds-WP_000061599.1;Parent=gene-CCO34_RS01075;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=CCO34_RS01075;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 204095 204751 . + . ID=gene-CCO34_RS01080;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=CCO34_RS01080;old_locus_tag=CCO34_01080 NZ_NPMD01000001.1 Protein Homology CDS 204095 204751 . + 0 ID=cds-WP_023243600.1;Parent=gene-CCO34_RS01080;Dbxref=GenBank:WP_023243600.1;Name=WP_023243600.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=CCO34_RS01080;product=formate dehydrogenase-N subunit gamma;protein_id=WP_023243600.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 204842 205852 . - . ID=gene-CCO34_RS01085;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=CCO34_RS01085;old_locus_tag=CCO34_01085 NZ_NPMD01000001.1 Protein Homology CDS 204842 205852 . - 0 ID=cds-WP_000642447.1;Parent=gene-CCO34_RS01085;Dbxref=GenBank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=CCO34_RS01085;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 206138 207835 . - . ID=gene-CCO34_RS01090;Name=CCO34_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01090;old_locus_tag=CCO34_01090 NZ_NPMD01000001.1 Protein Homology CDS 206138 207835 . - 0 ID=cds-WP_000450511.1;Parent=gene-CCO34_RS01090;Dbxref=GenBank:WP_000450511.1;Name=WP_000450511.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=CCO34_RS01090;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 208012 208155 . - . ID=gene-CCO34_RS01095;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=CCO34_RS01095;old_locus_tag=CCO34_01095 NZ_NPMD01000001.1 Protein Homology CDS 208012 208155 . - 0 ID=cds-WP_000841559.1;Parent=gene-CCO34_RS01095;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=CCO34_RS01095;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 208250 208465 . - . ID=gene-CCO34_RS01100;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=CCO34_RS01100;old_locus_tag=CCO34_01100 NZ_NPMD01000001.1 Protein Homology CDS 208250 208465 . - 0 ID=cds-WP_000495700.1;Parent=gene-CCO34_RS01100;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=CCO34_RS01100;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 208977 209408 . + . ID=gene-CCO34_RS01105;Name=CCO34_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01105;old_locus_tag=CCO34_01105 NZ_NPMD01000001.1 Protein Homology CDS 208977 209408 . + 0 ID=cds-WP_000152297.1;Parent=gene-CCO34_RS01105;Dbxref=GenBank:WP_000152297.1;Name=WP_000152297.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=CCO34_RS01105;product=OsmC family protein;protein_id=WP_000152297.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 209758 210087 . + . ID=gene-CCO34_RS01110;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=CCO34_RS01110;old_locus_tag=CCO34_01110 NZ_NPMD01000001.1 Protein Homology CDS 209758 210087 . + 0 ID=cds-WP_001032161.1;Parent=gene-CCO34_RS01110;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=CCO34_RS01110;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 210230 211015 . + . ID=gene-CCO34_RS01115;Name=CCO34_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01115;old_locus_tag=CCO34_01115 NZ_NPMD01000001.1 Protein Homology CDS 210230 211015 . + 0 ID=cds-WP_000698598.1;Parent=gene-CCO34_RS01115;Dbxref=GenBank:WP_000698598.1;Name=WP_000698598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=CCO34_RS01115;product=OBAP family protein;protein_id=WP_000698598.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 211144 212928 . + . ID=gene-CCO34_RS01120;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=CCO34_RS01120;old_locus_tag=CCO34_01120 NZ_NPMD01000001.1 Protein Homology CDS 211144 212928 . + 0 ID=cds-WP_000095549.1;Parent=gene-CCO34_RS01120;Dbxref=GenBank:WP_000095549.1;Name=WP_000095549.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=CCO34_RS01120;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_000095549.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 212925 215453 . + . ID=gene-CCO34_RS01125;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=CCO34_RS01125;old_locus_tag=CCO34_01125 NZ_NPMD01000001.1 Protein Homology CDS 212925 215453 . + 0 ID=cds-WP_000613144.1;Parent=gene-CCO34_RS01125;Dbxref=GenBank:WP_000613144.1;Name=WP_000613144.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=CCO34_RS01125;product=malto-oligosyltrehalose synthase;protein_id=WP_000613144.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 215510 217585 . + . ID=gene-CCO34_RS01130;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO34_RS01130;old_locus_tag=CCO34_01130 NZ_NPMD01000001.1 Protein Homology CDS 215510 217585 . + 0 ID=cds-WP_000210584.1;Parent=gene-CCO34_RS01130;Dbxref=GenBank:WP_000210584.1;Name=WP_000210584.1;Ontology_term=GO:0005980,GO:0004133,GO:0004553;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=CCO34_RS01130;product=glycogen debranching protein GlgX;protein_id=WP_000210584.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 217698 218900 . - . ID=gene-CCO34_RS01135;Name=CCO34_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01135;old_locus_tag=CCO34_01135 NZ_NPMD01000001.1 Protein Homology CDS 217698 218900 . - 0 ID=cds-WP_000347149.1;Parent=gene-CCO34_RS01135;Dbxref=GenBank:WP_000347149.1;Name=WP_000347149.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=CCO34_RS01135;product=MalY/PatB family protein;protein_id=WP_000347149.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 218913 220364 . - . ID=gene-CCO34_RS01140;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CCO34_RS01140;old_locus_tag=CCO34_01140 NZ_NPMD01000001.1 Protein Homology CDS 218913 220364 . - 0 ID=cds-WP_001276623.1;Parent=gene-CCO34_RS01140;Dbxref=GenBank:WP_001276623.1;Name=WP_001276623.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=CCO34_RS01140;product=Na+/H+ antiporter NhaC;protein_id=WP_001276623.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 220508 221515 . - . ID=gene-CCO34_RS01145;Name=CCO34_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01145;old_locus_tag=CCO34_01145 NZ_NPMD01000001.1 Protein Homology CDS 220508 221515 . - 0 ID=cds-WP_000201074.1;Parent=gene-CCO34_RS01145;Dbxref=GenBank:WP_000201074.1;Name=WP_000201074.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=CCO34_RS01145;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000201074.1;transl_table=11 NZ_NPMD01000001.1 RefSeq pseudogene 221773 223238 . + . ID=gene-CCO34_RS01150;Name=CCO34_RS01150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS01150;old_locus_tag=CCO34_01150;pseudo=true NZ_NPMD01000001.1 Protein Homology CDS 221773 223238 . + 0 ID=cds-CCO34_RS01150;Parent=gene-CCO34_RS01150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=CCO34_RS01150;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 223540 223830 . + . ID=gene-CCO34_RS01155;Name=CCO34_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01155;old_locus_tag=CCO34_01155 NZ_NPMD01000001.1 Protein Homology CDS 223540 223830 . + 0 ID=cds-WP_000742001.1;Parent=gene-CCO34_RS01155;Dbxref=GenBank:WP_000742001.1;Name=WP_000742001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742001.1;locus_tag=CCO34_RS01155;product=hypothetical protein;protein_id=WP_000742001.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 224106 224438 . - . ID=gene-CCO34_RS01165;Name=CCO34_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01165;old_locus_tag=CCO34_01165 NZ_NPMD01000001.1 Protein Homology CDS 224106 224438 . - 0 ID=cds-WP_000253154.1;Parent=gene-CCO34_RS01165;Dbxref=GenBank:WP_000253154.1;Name=WP_000253154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=CCO34_RS01165;product=DUF1493 family protein;protein_id=WP_000253154.1;transl_table=11 NZ_NPMD01000001.1 RefSeq pseudogene 224432 224530 . - . ID=gene-CCO34_RS26130;Name=CCO34_RS26130;end_range=224530,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26130;partial=true;pseudo=true NZ_NPMD01000001.1 Protein Homology CDS 224432 224530 . - 0 ID=cds-CCO34_RS26130;Parent=gene-CCO34_RS26130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=224530,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_090138499.1;locus_tag=CCO34_RS26130;partial=true;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 224795 225043 . + . ID=gene-CCO34_RS01175;Name=CCO34_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01175;old_locus_tag=CCO34_01175 NZ_NPMD01000001.1 Protein Homology CDS 224795 225043 . + 0 ID=cds-WP_000885424.1;Parent=gene-CCO34_RS01175;Dbxref=GenBank:WP_000885424.1;Name=WP_000885424.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=CCO34_RS01175;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885424.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 225033 225317 . + . ID=gene-CCO34_RS01180;Name=CCO34_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01180;old_locus_tag=CCO34_01180 NZ_NPMD01000001.1 Protein Homology CDS 225033 225317 . + 0 ID=cds-WP_000221343.1;Parent=gene-CCO34_RS01180;Dbxref=GenBank:WP_000221343.1;Name=WP_000221343.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=CCO34_RS01180;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000221343.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 225488 225877 . + . ID=gene-CCO34_RS01185;Name=CCO34_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01185;old_locus_tag=CCO34_01185 NZ_NPMD01000001.1 Protein Homology CDS 225488 225877 . + 0 ID=cds-WP_000194089.1;Parent=gene-CCO34_RS01185;Dbxref=GenBank:WP_000194089.1;Name=WP_000194089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=CCO34_RS01185;product=RidA family protein;protein_id=WP_000194089.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 225929 227008 . - . ID=gene-CCO34_RS01190;Name=CCO34_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01190;old_locus_tag=CCO34_01190 NZ_NPMD01000001.1 Protein Homology CDS 225929 227008 . - 0 ID=cds-WP_000954691.1;Parent=gene-CCO34_RS01190;Dbxref=GenBank:WP_000954691.1;Name=WP_000954691.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=CCO34_RS01190;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_000954691.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 227201 227689 . - . ID=gene-CCO34_RS01195;Name=CCO34_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01195;old_locus_tag=CCO34_01195 NZ_NPMD01000001.1 Protein Homology CDS 227201 227689 . - 0 ID=cds-WP_001293638.1;Parent=gene-CCO34_RS01195;Dbxref=GenBank:WP_001293638.1;Name=WP_001293638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=CCO34_RS01195;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293638.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 227734 229242 . + . ID=gene-CCO34_RS01200;Name=CCO34_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01200;old_locus_tag=CCO34_01200 NZ_NPMD01000001.1 Protein Homology CDS 227734 229242 . + 0 ID=cds-WP_000199417.1;Parent=gene-CCO34_RS01200;Dbxref=GenBank:WP_000199417.1;Name=WP_000199417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=CCO34_RS01200;product=FAD-dependent oxidoreductase;protein_id=WP_000199417.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 229232 230473 . + . ID=gene-CCO34_RS01205;Name=CCO34_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01205;old_locus_tag=CCO34_01205 NZ_NPMD01000001.1 Protein Homology CDS 229232 230473 . + 0 ID=cds-WP_001095731.1;Parent=gene-CCO34_RS01205;Dbxref=GenBank:WP_001095731.1;Name=WP_001095731.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=CCO34_RS01205;product=MFS transporter;protein_id=WP_001095731.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 230543 232099 . + . ID=gene-CCO34_RS01210;Name=CCO34_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01210;old_locus_tag=CCO34_01210 NZ_NPMD01000001.1 Protein Homology CDS 230543 232099 . + 0 ID=cds-WP_000476913.1;Parent=gene-CCO34_RS01210;Dbxref=GenBank:WP_000476913.1;Name=WP_000476913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=CCO34_RS01210;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_000476913.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 232276 233562 . + . ID=gene-CCO34_RS01215;Name=CCO34_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01215;old_locus_tag=CCO34_01215 NZ_NPMD01000001.1 Protein Homology CDS 232276 233562 . + 0 ID=cds-WP_000824239.1;Parent=gene-CCO34_RS01215;Dbxref=GenBank:WP_000824239.1;Name=WP_000824239.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=CCO34_RS01215;product=MFS transporter;protein_id=WP_000824239.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 233537 234562 . + . ID=gene-CCO34_RS01220;Name=CCO34_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01220;old_locus_tag=CCO34_01220 NZ_NPMD01000001.1 Protein Homology CDS 233537 234562 . + 0 ID=cds-WP_000864928.1;Parent=gene-CCO34_RS01220;Dbxref=GenBank:WP_000864928.1;Name=WP_000864928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=CCO34_RS01220;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864928.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 234621 235412 . - . ID=gene-CCO34_RS01225;Name=CCO34_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01225;old_locus_tag=CCO34_01225 NZ_NPMD01000001.1 Protein Homology CDS 234621 235412 . - 0 ID=cds-WP_001518759.1;Parent=gene-CCO34_RS01225;Dbxref=GenBank:WP_001518759.1;Name=WP_001518759.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=CCO34_RS01225;product=FadR/GntR family transcriptional regulator;protein_id=WP_001518759.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 235458 236549 . - . ID=gene-CCO34_RS01230;Name=CCO34_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01230;old_locus_tag=CCO34_01230 NZ_NPMD01000001.1 Protein Homology CDS 235458 236549 . - 0 ID=cds-WP_000981375.1;Parent=gene-CCO34_RS01230;Dbxref=GenBank:WP_000981375.1;Name=WP_000981375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=CCO34_RS01230;product=choloylglycine hydrolase family protein;protein_id=WP_000981375.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 236978 238081 . + . ID=gene-CCO34_RS01235;Name=CCO34_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01235;old_locus_tag=CCO34_01235 NZ_NPMD01000001.1 Protein Homology CDS 236978 238081 . + 0 ID=cds-WP_001194448.1;Parent=gene-CCO34_RS01235;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=CCO34_RS01235;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 238084 239886 . + . ID=gene-CCO34_RS01240;Name=CCO34_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01240;old_locus_tag=CCO34_01240 NZ_NPMD01000001.1 Protein Homology CDS 238084 239886 . + 0 ID=cds-WP_000331200.1;Parent=gene-CCO34_RS01240;Dbxref=GenBank:WP_000331200.1;Name=WP_000331200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=CCO34_RS01240;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331200.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 239837 240580 . + . ID=gene-CCO34_RS01245;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=CCO34_RS01245;old_locus_tag=CCO34_01245 NZ_NPMD01000001.1 Protein Homology CDS 239837 240580 . + 0 ID=cds-WP_000924456.1;Parent=gene-CCO34_RS01245;Dbxref=GenBank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=CCO34_RS01245;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 240586 241194 . + . ID=gene-CCO34_RS01250;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=CCO34_RS01250;old_locus_tag=CCO34_01250 NZ_NPMD01000001.1 Protein Homology CDS 240586 241194 . + 0 ID=cds-WP_000852664.1;Parent=gene-CCO34_RS01250;Dbxref=GenBank:WP_000852664.1;Name=WP_000852664.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=CCO34_RS01250;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852664.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 241194 241493 . + . ID=gene-CCO34_RS01255;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO34_RS01255;old_locus_tag=CCO34_01255 NZ_NPMD01000001.1 Protein Homology CDS 241194 241493 . + 0 ID=cds-WP_000334910.1;Parent=gene-CCO34_RS01255;Dbxref=GenBank:WP_000334910.1;Name=WP_000334910.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=CCO34_RS01255;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334910.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 241490 241900 . + . ID=gene-CCO34_RS01260;Name=CCO34_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01260;old_locus_tag=CCO34_01260 NZ_NPMD01000001.1 Protein Homology CDS 241490 241900 . + 0 ID=cds-WP_000155990.1;Parent=gene-CCO34_RS01260;Dbxref=GenBank:WP_000155990.1;Name=WP_000155990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=CCO34_RS01260;product=hydrogenase;protein_id=WP_000155990.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 241918 242979 . + . ID=gene-CCO34_RS01265;Name=CCO34_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01265;old_locus_tag=CCO34_01265 NZ_NPMD01000001.1 Protein Homology CDS 241918 242979 . + 0 ID=cds-WP_001016746.1;Parent=gene-CCO34_RS01265;Dbxref=GenBank:WP_001016746.1;Name=WP_001016746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=CCO34_RS01265;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_001016746.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 242967 243854 . + . ID=gene-CCO34_RS01270;Name=CCO34_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01270;old_locus_tag=CCO34_01270 NZ_NPMD01000001.1 Protein Homology CDS 242967 243854 . + 0 ID=cds-WP_094965389.1;Parent=gene-CCO34_RS01270;Dbxref=GenBank:WP_094965389.1;Name=WP_094965389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=CCO34_RS01270;product=ATP/GTP-binding protein;protein_id=WP_094965389.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 243867 244208 . + . ID=gene-CCO34_RS01275;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO34_RS01275;old_locus_tag=CCO34_01275 NZ_NPMD01000001.1 Protein Homology CDS 243867 244208 . + 0 ID=cds-WP_000544772.1;Parent=gene-CCO34_RS01275;Dbxref=GenBank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=CCO34_RS01275;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 244349 245467 . - . ID=gene-CCO34_RS01280;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=CCO34_RS01280;old_locus_tag=CCO34_01280 NZ_NPMD01000001.1 Protein Homology CDS 244349 245467 . - 0 ID=cds-WP_000758335.1;Parent=gene-CCO34_RS01280;Dbxref=GenBank:WP_000758335.1;Name=WP_000758335.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=CCO34_RS01280;product=porin OmpC;protein_id=WP_000758335.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 246184 246726 . + . ID=gene-CCO34_RS01285;Name=CCO34_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01285;old_locus_tag=CCO34_01285 NZ_NPMD01000001.1 Protein Homology CDS 246184 246726 . + 0 ID=cds-WP_000513122.1;Parent=gene-CCO34_RS01285;Dbxref=GenBank:WP_000513122.1;Name=WP_000513122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=CCO34_RS01285;product=YybH family protein;protein_id=WP_000513122.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 246782 247696 . - . ID=gene-CCO34_RS01290;Name=CCO34_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01290;old_locus_tag=CCO34_01290 NZ_NPMD01000001.1 Protein Homology CDS 246782 247696 . - 0 ID=cds-WP_001675544.1;Parent=gene-CCO34_RS01290;Dbxref=GenBank:WP_001675544.1;Name=WP_001675544.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=CCO34_RS01290;product=bestrophin family protein;protein_id=WP_001675544.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 247952 248311 . - . ID=gene-CCO34_RS01295;Name=CCO34_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01295;old_locus_tag=CCO34_01295 NZ_NPMD01000001.1 Protein Homology CDS 247952 248311 . - 0 ID=cds-WP_000992449.1;Parent=gene-CCO34_RS01295;Dbxref=GenBank:WP_000992449.1;Name=WP_000992449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=CCO34_RS01295;product=DUF4186 domain-containing protein;protein_id=WP_000992449.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 248311 249237 . - . ID=gene-CCO34_RS01300;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=CCO34_RS01300;old_locus_tag=CCO34_01300 NZ_NPMD01000001.1 Protein Homology CDS 248311 249237 . - 0 ID=cds-WP_000090081.1;Parent=gene-CCO34_RS01300;Dbxref=GenBank:WP_000090081.1;Name=WP_000090081.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=CCO34_RS01300;product=glutaminase B;protein_id=WP_000090081.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 249310 250698 . - . ID=gene-CCO34_RS01305;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=CCO34_RS01305;old_locus_tag=CCO34_01305 NZ_NPMD01000001.1 Protein Homology CDS 249310 250698 . - 0 ID=cds-WP_000178403.1;Parent=gene-CCO34_RS01305;Dbxref=GenBank:WP_000178403.1;Name=WP_000178403.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=CCO34_RS01305;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000178403.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 250801 251673 . + . ID=gene-CCO34_RS01310;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=CCO34_RS01310;old_locus_tag=CCO34_01310 NZ_NPMD01000001.1 Protein Homology CDS 250801 251673 . + 0 ID=cds-WP_000366539.1;Parent=gene-CCO34_RS01310;Dbxref=GenBank:WP_000366539.1;Name=WP_000366539.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=CCO34_RS01310;product=putrescine utilization regulator PtrR;protein_id=WP_000366539.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 251789 252979 . + . ID=gene-CCO34_RS01315;Name=CCO34_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01315;old_locus_tag=CCO34_01315 NZ_NPMD01000001.1 Protein Homology CDS 251789 252979 . + 0 ID=cds-WP_000154621.1;Parent=gene-CCO34_RS01315;Dbxref=GenBank:WP_000154621.1;Name=WP_000154621.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=CCO34_RS01315;product=sugar transporter;protein_id=WP_000154621.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 253026 253691 . - . ID=gene-CCO34_RS01320;Name=CCO34_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01320;old_locus_tag=CCO34_01320 NZ_NPMD01000001.1 Protein Homology CDS 253026 253691 . - 0 ID=cds-WP_000968968.1;Parent=gene-CCO34_RS01320;Dbxref=GenBank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=CCO34_RS01320;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 253950 254384 . + . ID=gene-CCO34_RS01325;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=CCO34_RS01325;old_locus_tag=CCO34_01325 NZ_NPMD01000001.1 Protein Homology CDS 253950 254384 . + 0 ID=cds-WP_000843434.1;Parent=gene-CCO34_RS01325;Dbxref=GenBank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=CCO34_RS01325;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 254404 254787 . + . ID=gene-CCO34_RS01330;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=CCO34_RS01330;old_locus_tag=CCO34_01330 NZ_NPMD01000001.1 Protein Homology CDS 254404 254787 . + 0 ID=cds-WP_000091194.1;Parent=gene-CCO34_RS01330;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=CCO34_RS01330;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 254816 255031 . + . ID=gene-CCO34_RS01335;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=CCO34_RS01335;old_locus_tag=CCO34_01335 NZ_NPMD01000001.1 Protein Homology CDS 254816 255031 . + 0 ID=cds-WP_000783049.1;Parent=gene-CCO34_RS01335;Dbxref=GenBank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=CCO34_RS01335;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 255150 256052 . - . ID=gene-CCO34_RS01340;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=CCO34_RS01340;old_locus_tag=CCO34_01340 NZ_NPMD01000001.1 Protein Homology CDS 255150 256052 . - 0 ID=cds-WP_000987750.1;Parent=gene-CCO34_RS01340;Dbxref=GenBank:WP_000987750.1;Name=WP_000987750.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=CCO34_RS01340;product=O-acetylserine/cysteine exporter;protein_id=WP_000987750.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 256280 257467 . + . ID=gene-CCO34_RS01345;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=CCO34_RS01345;old_locus_tag=CCO34_01345 NZ_NPMD01000001.1 Protein Homology CDS 256280 257467 . + 0 ID=cds-WP_001068056.1;Parent=gene-CCO34_RS01345;Dbxref=GenBank:WP_001068056.1;Name=WP_001068056.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=CCO34_RS01345;product=efflux MFS transporter YdeE;protein_id=WP_001068056.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 257715 257810 . + . ID=gene-CCO34_RS01350;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=CCO34_RS01350;old_locus_tag=CCO34_01350 NZ_NPMD01000001.1 Protein Homology CDS 257715 257810 . + 0 ID=cds-WP_000901531.1;Parent=gene-CCO34_RS01350;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=CCO34_RS01350;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 258157 258549 . - . ID=gene-CCO34_RS01355;Name=CCO34_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01355;old_locus_tag=CCO34_01355 NZ_NPMD01000001.1 Protein Homology CDS 258157 258549 . - 0 ID=cds-WP_080180973.1;Parent=gene-CCO34_RS01355;Dbxref=GenBank:WP_080180973.1;Name=WP_080180973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=CCO34_RS01355;product=YdeI family stress tolerance OB fold protein;protein_id=WP_080180973.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 258976 259503 . + . ID=gene-CCO34_RS01360;Name=CCO34_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01360;old_locus_tag=CCO34_01360 NZ_NPMD01000001.1 Protein Homology CDS 258976 259503 . + 0 ID=cds-WP_001235357.1;Parent=gene-CCO34_RS01360;Dbxref=GenBank:WP_001235357.1;Name=WP_001235357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=CCO34_RS01360;product=2-oxo-tetronate isomerase;protein_id=WP_001235357.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 259623 259805 . - . ID=gene-CCO34_RS01365;Name=CCO34_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01365;old_locus_tag=CCO34_01365 NZ_NPMD01000001.1 Protein Homology CDS 259623 259805 . - 0 ID=cds-WP_000807642.1;Parent=gene-CCO34_RS01365;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=CCO34_RS01365;product=general stress protein;protein_id=WP_000807642.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 260149 262191 . - . ID=gene-CCO34_RS01370;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=CCO34_RS01370;old_locus_tag=CCO34_01370 NZ_NPMD01000001.1 Protein Homology CDS 260149 262191 . - 0 ID=cds-WP_000106261.1;Parent=gene-CCO34_RS01370;Dbxref=GenBank:WP_000106261.1;Name=WP_000106261.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=CCO34_RS01370;product=peptidyl-dipeptidase Dcp;protein_id=WP_000106261.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 262330 263076 . + . ID=gene-CCO34_RS01375;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=CCO34_RS01375;old_locus_tag=CCO34_01375 NZ_NPMD01000001.1 Protein Homology CDS 262330 263076 . + 0 ID=cds-WP_000636564.1;Parent=gene-CCO34_RS01375;Dbxref=GenBank:WP_000636564.1;Name=WP_000636564.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=CCO34_RS01375;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636564.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 263206 263892 . + . ID=gene-CCO34_RS01380;Name=CCO34_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01380;old_locus_tag=CCO34_01380 NZ_NPMD01000001.1 Protein Homology CDS 263206 263892 . + 0 ID=cds-WP_000215563.1;Parent=gene-CCO34_RS01380;Dbxref=GenBank:WP_000215563.1;Name=WP_000215563.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=CCO34_RS01380;product=GntR family transcriptional regulator;protein_id=WP_000215563.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 264073 264276 . + . ID=gene-CCO34_RS01385;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=CCO34_RS01385;old_locus_tag=CCO34_01385 NZ_NPMD01000001.1 Protein Homology CDS 264073 264276 . + 0 ID=cds-WP_000989267.1;Parent=gene-CCO34_RS01385;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=CCO34_RS01385;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 264343 265809 . - . ID=gene-CCO34_RS01390;Name=CCO34_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01390;old_locus_tag=CCO34_01390 NZ_NPMD01000001.1 Protein Homology CDS 264343 265809 . - 0 ID=cds-WP_079828531.1;Parent=gene-CCO34_RS01390;Dbxref=GenBank:WP_079828531.1;Name=WP_079828531.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=CCO34_RS01390;product=mannitol dehydrogenase family protein;protein_id=WP_079828531.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 265953 267332 . - . ID=gene-CCO34_RS01395;Name=CCO34_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01395;old_locus_tag=CCO34_01395 NZ_NPMD01000001.1 Protein Homology CDS 265953 267332 . - 0 ID=cds-WP_023221336.1;Parent=gene-CCO34_RS01395;Dbxref=GenBank:WP_023221336.1;Name=WP_023221336.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=CCO34_RS01395;product=MFS transporter;protein_id=WP_023221336.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 267386 268405 . - . ID=gene-CCO34_RS01400;Name=CCO34_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01400;old_locus_tag=CCO34_01400 NZ_NPMD01000001.1 Protein Homology CDS 267386 268405 . - 0 ID=cds-WP_000836499.1;Parent=gene-CCO34_RS01400;Dbxref=GenBank:WP_000836499.1;Name=WP_000836499.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=CCO34_RS01400;product=Zn-dependent oxidoreductase;protein_id=WP_000836499.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 268416 269630 . - . ID=gene-CCO34_RS01405;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=CCO34_RS01405;old_locus_tag=CCO34_01405 NZ_NPMD01000001.1 Protein Homology CDS 268416 269630 . - 0 ID=cds-WP_000706269.1;Parent=gene-CCO34_RS01405;Dbxref=GenBank:WP_000706269.1;Name=WP_000706269.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=CCO34_RS01405;product=starvation-sensing protein RspA;protein_id=WP_000706269.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 269752 270078 . - . ID=gene-CCO34_RS01410;Name=CCO34_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01410;old_locus_tag=CCO34_01410 NZ_NPMD01000001.1 Protein Homology CDS 269752 270078 . - 0 ID=cds-WP_000921389.1;Parent=gene-CCO34_RS01410;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=CCO34_RS01410;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 270231 270572 . + . ID=gene-CCO34_RS01415;Name=CCO34_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01415;old_locus_tag=CCO34_01415 NZ_NPMD01000001.1 Protein Homology CDS 270231 270572 . + 0 ID=cds-WP_001066440.1;Parent=gene-CCO34_RS01415;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=CCO34_RS01415;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 270608 271168 . + . ID=gene-CCO34_RS01420;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=CCO34_RS01420;old_locus_tag=CCO34_01420 NZ_NPMD01000001.1 Protein Homology CDS 270608 271168 . + 0 ID=cds-WP_000199997.1;Parent=gene-CCO34_RS01420;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=CCO34_RS01420;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 271209 271919 . - . ID=gene-CCO34_RS01425;Name=CCO34_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01425;old_locus_tag=CCO34_01425 NZ_NPMD01000001.1 Protein Homology CDS 271209 271919 . - 0 ID=cds-WP_000743124.1;Parent=gene-CCO34_RS01425;Dbxref=GenBank:WP_000743124.1;Name=WP_000743124.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=CCO34_RS01425;product=YnfC family lipoprotein;protein_id=WP_000743124.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 272023 272331 . + . ID=gene-CCO34_RS01430;Name=CCO34_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01430;old_locus_tag=CCO34_01430 NZ_NPMD01000001.1 Protein Homology CDS 272023 272331 . + 0 ID=cds-WP_000975516.1;Parent=gene-CCO34_RS01430;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=CCO34_RS01430;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 272488 274926 . + . ID=gene-CCO34_RS01435;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=CCO34_RS01435;old_locus_tag=CCO34_01435 NZ_NPMD01000001.1 Protein Homology CDS 272488 274926 . + 0 ID=cds-WP_001117604.1;Parent=gene-CCO34_RS01435;Dbxref=GenBank:WP_001117604.1;Name=WP_001117604.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=CCO34_RS01435;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_001117604.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 275025 277460 . + . ID=gene-CCO34_RS01440;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=CCO34_RS01440;old_locus_tag=CCO34_01440 NZ_NPMD01000001.1 Protein Homology CDS 275025 277460 . + 0 ID=cds-WP_000705276.1;Parent=gene-CCO34_RS01440;Dbxref=GenBank:WP_000705276.1;Name=WP_000705276.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=CCO34_RS01440;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_000705276.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 277471 278088 . + . ID=gene-CCO34_RS01445;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=CCO34_RS01445;old_locus_tag=CCO34_01445 NZ_NPMD01000001.1 Protein Homology CDS 277471 278088 . + 0 ID=cds-WP_000213069.1;Parent=gene-CCO34_RS01445;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO34_RS01445;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 278090 278947 . + . ID=gene-CCO34_RS01450;Name=CCO34_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01450;old_locus_tag=CCO34_01450 NZ_NPMD01000001.1 Protein Homology CDS 278090 278947 . + 0 ID=cds-WP_000534700.1;Parent=gene-CCO34_RS01450;Dbxref=GenBank:WP_000534700.1;Name=WP_000534700.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=CCO34_RS01450;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534700.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 278990 279604 . + . ID=gene-CCO34_RS01455;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=CCO34_RS01455;old_locus_tag=CCO34_01455 NZ_NPMD01000001.1 Protein Homology CDS 278990 279604 . + 0 ID=cds-WP_000206561.1;Parent=gene-CCO34_RS01455;Dbxref=GenBank:WP_000206561.1;Name=WP_000206561.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=CCO34_RS01455;product=Tat proofreading chaperone DmsD;protein_id=WP_000206561.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 279909 280619 . + . ID=gene-CCO34_RS01460;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO34_RS01460;old_locus_tag=CCO34_01460 NZ_NPMD01000001.1 Protein Homology CDS 279909 280619 . + 0 ID=cds-WP_000556891.1;Parent=gene-CCO34_RS01460;Dbxref=GenBank:WP_000556891.1;Name=WP_000556891.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=CCO34_RS01460;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000556891.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 280648 281550 . + . ID=gene-CCO34_RS01465;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=CCO34_RS01465;old_locus_tag=CCO34_01465 NZ_NPMD01000001.1 Protein Homology CDS 280648 281550 . + 0 ID=cds-WP_001211193.1;Parent=gene-CCO34_RS01465;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=CCO34_RS01465;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 281560 282207 . + . ID=gene-CCO34_RS01470;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=CCO34_RS01470;old_locus_tag=CCO34_01470 NZ_NPMD01000001.1 Protein Homology CDS 281560 282207 . + 0 ID=cds-WP_000379677.1;Parent=gene-CCO34_RS01470;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=CCO34_RS01470;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 282207 283355 . + . ID=gene-CCO34_RS01475;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=CCO34_RS01475;old_locus_tag=CCO34_01475 NZ_NPMD01000001.1 Protein Homology CDS 282207 283355 . + 0 ID=cds-WP_000593093.1;Parent=gene-CCO34_RS01475;Dbxref=GenBank:WP_000593093.1;Name=WP_000593093.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=CCO34_RS01475;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593093.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 283491 284780 . + . ID=gene-CCO34_RS01480;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=CCO34_RS01480;old_locus_tag=CCO34_01480 NZ_NPMD01000001.1 Protein Homology CDS 283491 284780 . + 0 ID=cds-WP_000554908.1;Parent=gene-CCO34_RS01480;Dbxref=GenBank:WP_000554908.1;Name=WP_000554908.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=CCO34_RS01480;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_000554908.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 284736 285431 . - . ID=gene-CCO34_RS01485;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO34_RS01485;old_locus_tag=CCO34_01485 NZ_NPMD01000001.1 Protein Homology CDS 284736 285431 . - 0 ID=cds-WP_000919233.1;Parent=gene-CCO34_RS01485;Dbxref=GenBank:WP_000919233.1;Name=WP_000919233.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=CCO34_RS01485;product=dethiobiotin synthase;protein_id=WP_000919233.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 285557 286777 . - . ID=gene-CCO34_RS01490;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=CCO34_RS01490;old_locus_tag=CCO34_01490 NZ_NPMD01000001.1 Protein Homology CDS 285557 286777 . - 0 ID=cds-WP_000225094.1;Parent=gene-CCO34_RS01490;Dbxref=GenBank:WP_000225094.1;Name=WP_000225094.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=CCO34_RS01490;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225094.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 286905 287804 . - . ID=gene-CCO34_RS01500;Name=CCO34_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01500;old_locus_tag=CCO34_01500 NZ_NPMD01000001.1 Protein Homology CDS 286905 287804 . - 0 ID=cds-WP_001019577.1;Parent=gene-CCO34_RS01500;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=CCO34_RS01500;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 287924 289177 . + . ID=gene-CCO34_RS01505;Name=CCO34_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01505;old_locus_tag=CCO34_01505 NZ_NPMD01000001.1 Protein Homology CDS 287924 289177 . + 0 ID=cds-WP_000091796.1;Parent=gene-CCO34_RS01505;Dbxref=GenBank:WP_000091796.1;Name=WP_000091796.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=CCO34_RS01505;product=MFS transporter;protein_id=WP_000091796.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 289244 289336 . - . ID=gene-CCO34_RS25735;Name=CCO34_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25735 NZ_NPMD01000001.1 Protein Homology CDS 289244 289336 . - 0 ID=cds-WP_001068154.1;Parent=gene-CCO34_RS25735;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=CCO34_RS25735;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 289572 289820 . + . ID=gene-CCO34_RS01510;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=CCO34_RS01510;old_locus_tag=CCO34_01510 NZ_NPMD01000001.1 Protein Homology CDS 289572 289820 . + 0 ID=cds-WP_000756314.1;Parent=gene-CCO34_RS01510;Dbxref=GenBank:WP_000756314.1;Name=WP_000756314.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=CCO34_RS01510;product=acid resistance repetitive basic protein Asr;protein_id=WP_000756314.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 290089 290910 . + . ID=gene-CCO34_RS01520;Name=CCO34_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01520;old_locus_tag=CCO34_01520 NZ_NPMD01000001.1 Protein Homology CDS 290089 290910 . + 0 ID=cds-WP_000549649.1;Parent=gene-CCO34_RS01520;Dbxref=GenBank:WP_000549649.1;Name=WP_000549649.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=CCO34_RS01520;product=trypsin-like serine peptidase;protein_id=WP_000549649.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 290950 291279 . - . ID=gene-CCO34_RS01525;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=CCO34_RS01525;old_locus_tag=CCO34_01525 NZ_NPMD01000001.1 Protein Homology CDS 290950 291279 . - 0 ID=cds-WP_001183821.1;Parent=gene-CCO34_RS01525;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=CCO34_RS01525;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 291266 291628 . - . ID=gene-CCO34_RS01530;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=CCO34_RS01530;old_locus_tag=CCO34_01530 NZ_NPMD01000001.1 Protein Homology CDS 291266 291628 . - 0 ID=cds-WP_000500278.1;Parent=gene-CCO34_RS01530;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=CCO34_RS01530;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 291740 291910 . - . ID=gene-CCO34_RS26135;Name=CCO34_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26135;old_locus_tag=CCO34_01535 NZ_NPMD01000001.1 Protein Homology CDS 291740 291910 . - 0 ID=cds-WP_001539987.1;Parent=gene-CCO34_RS26135;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=CCO34_RS26135;product=hypothetical protein;protein_id=WP_001539987.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 292046 293080 . + . ID=gene-CCO34_RS01540;Name=CCO34_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01540;old_locus_tag=CCO34_01540 NZ_NPMD01000001.1 Protein Homology CDS 292046 293080 . + 0 ID=cds-WP_001118268.1;Parent=gene-CCO34_RS01540;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=CCO34_RS01540;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 293255 294643 . - . ID=gene-CCO34_RS01545;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=CCO34_RS01545;old_locus_tag=CCO34_01545 NZ_NPMD01000001.1 Protein Homology CDS 293255 294643 . - 0 ID=cds-WP_000014056.1;Parent=gene-CCO34_RS01545;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=CCO34_RS01545;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 294654 296183 . - . ID=gene-CCO34_RS01550;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=CCO34_RS01550;old_locus_tag=CCO34_01550 NZ_NPMD01000001.1 Protein Homology CDS 294654 296183 . - 0 ID=cds-WP_001219360.1;Parent=gene-CCO34_RS01550;Dbxref=GenBank:WP_001219360.1;Name=WP_001219360.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=CCO34_RS01550;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219360.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 296710 297654 . + . ID=gene-CCO34_RS01555;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=CCO34_RS01555;old_locus_tag=CCO34_01555 NZ_NPMD01000001.1 Protein Homology CDS 296710 297654 . + 0 ID=cds-WP_000769294.1;Parent=gene-CCO34_RS01555;Dbxref=GenBank:WP_000769294.1;Name=WP_000769294.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=CCO34_RS01555;product=DUF1471 family protein YdgH;protein_id=WP_000769294.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 297953 299335 . + . ID=gene-CCO34_RS01560;Name=CCO34_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01560;old_locus_tag=CCO34_01560 NZ_NPMD01000001.1 Protein Homology CDS 297953 299335 . + 0 ID=cds-WP_000412353.1;Parent=gene-CCO34_RS01560;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=CCO34_RS01560;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 299397 299732 . - . ID=gene-CCO34_RS01565;Name=CCO34_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01565;old_locus_tag=CCO34_01565 NZ_NPMD01000001.1 Protein Homology CDS 299397 299732 . - 0 ID=cds-WP_000524877.1;Parent=gene-CCO34_RS01565;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=CCO34_RS01565;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 299859 300590 . + . ID=gene-CCO34_RS01570;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=CCO34_RS01570;old_locus_tag=CCO34_01570 NZ_NPMD01000001.1 Protein Homology CDS 299859 300590 . + 0 ID=cds-WP_001080048.1;Parent=gene-CCO34_RS01570;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=CCO34_RS01570;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 301070 302212 . + . ID=gene-CCO34_RS01580;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=CCO34_RS01580;old_locus_tag=CCO34_01580 NZ_NPMD01000001.1 Protein Homology CDS 301070 302212 . + 0 ID=cds-WP_023180972.1;Parent=gene-CCO34_RS01580;Dbxref=GenBank:WP_023180972.1;Name=WP_023180972.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=CCO34_RS01580;product=porin OmpC;protein_id=WP_023180972.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 302365 304071 . + . ID=gene-CCO34_RS01585;Name=CCO34_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01585;old_locus_tag=CCO34_01585 NZ_NPMD01000001.1 Protein Homology CDS 302365 304071 . + 0 ID=cds-WP_080180966.1;Parent=gene-CCO34_RS01585;Dbxref=GenBank:WP_080180966.1;Name=WP_080180966.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=CCO34_RS01585;product=amidohydrolase;protein_id=WP_080180966.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 304182 305483 . + . ID=gene-CCO34_RS01590;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=CCO34_RS01590;old_locus_tag=CCO34_01590 NZ_NPMD01000001.1 Protein Homology CDS 304182 305483 . + 0 ID=cds-WP_000732949.1;Parent=gene-CCO34_RS01590;Dbxref=GenBank:WP_000732949.1;Name=WP_000732949.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=CCO34_RS01590;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732949.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 305559 306488 . + . ID=gene-CCO34_RS01595;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=CCO34_RS01595;old_locus_tag=CCO34_01595 NZ_NPMD01000001.1 Protein Homology CDS 305559 306488 . + 0 ID=cds-WP_000092500.1;Parent=gene-CCO34_RS01595;Dbxref=GenBank:WP_000092500.1;Name=WP_000092500.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=CCO34_RS01595;product=DNA replication terminus site-binding protein;protein_id=WP_000092500.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 306485 307888 . - . ID=gene-CCO34_RS01600;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CCO34_RS01600;old_locus_tag=CCO34_01600 NZ_NPMD01000001.1 Protein Homology CDS 306485 307888 . - 0 ID=cds-WP_000259117.1;Parent=gene-CCO34_RS01600;Dbxref=GenBank:WP_000259117.1;Name=WP_000259117.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=CCO34_RS01600;product=class II fumarate hydratase;protein_id=WP_000259117.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 308056 309702 . - . ID=gene-CCO34_RS01605;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=CCO34_RS01605;old_locus_tag=CCO34_01605 NZ_NPMD01000001.1 Protein Homology CDS 308056 309702 . - 0 ID=cds-WP_000066611.1;Parent=gene-CCO34_RS01605;Dbxref=GenBank:WP_000066611.1;Name=WP_000066611.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=CCO34_RS01605;product=class I fumarate hydratase;protein_id=WP_000066611.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 309902 311077 . + . ID=gene-CCO34_RS01610;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CCO34_RS01610;old_locus_tag=CCO34_01610 NZ_NPMD01000001.1 Protein Homology CDS 309902 311077 . + 0 ID=cds-WP_001170618.1;Parent=gene-CCO34_RS01610;Dbxref=GenBank:WP_001170618.1;Name=WP_001170618.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=CCO34_RS01610;product=mannose-6-phosphate isomerase;protein_id=WP_001170618.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 311180 312688 . + . ID=gene-CCO34_RS01615;Name=CCO34_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01615;old_locus_tag=CCO34_01615 NZ_NPMD01000001.1 Protein Homology CDS 311180 312688 . + 0 ID=cds-WP_000753334.1;Parent=gene-CCO34_RS01615;Dbxref=GenBank:WP_000753334.1;Name=WP_000753334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=CCO34_RS01615;product=YdgA family protein;protein_id=WP_000753334.1;transl_table=11 NZ_NPMD01000001.1 RefSeq pseudogene 312807 313027 . + . ID=gene-CCO34_RS01620;Name=CCO34_RS01620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS01620;old_locus_tag=CCO34_01620;partial=true;pseudo=true;start_range=.,312807 NZ_NPMD01000001.1 Protein Homology CDS 312807 313027 . + 0 ID=cds-CCO34_RS01620;Parent=gene-CCO34_RS01620;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=CCO34_RS01620;partial=true;product=glucose PTS transporter subunit EIIB;pseudo=true;start_range=.,312807;transl_table=11 NZ_NPMD01000001.1 RefSeq pseudogene 313037 313168 . + . ID=gene-CCO34_RS01625;Name=CCO34_RS01625;end_range=313168,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS01625;old_locus_tag=CCO34_01625;partial=true;pseudo=true NZ_NPMD01000001.1 Protein Homology CDS 313037 313168 . + 0 ID=cds-CCO34_RS01625;Parent=gene-CCO34_RS01625;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=313168,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459379.1;locus_tag=CCO34_RS01625;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 313394 314395 . + . ID=gene-CCO34_RS01630;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CCO34_RS01630;old_locus_tag=CCO34_01630 NZ_NPMD01000001.1 Protein Homology CDS 313394 314395 . + 0 ID=cds-WP_000565564.1;Parent=gene-CCO34_RS01630;Dbxref=GenBank:WP_000565564.1;Name=WP_000565564.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=CCO34_RS01630;product=adenosine deaminase;protein_id=WP_000565564.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 314470 315510 . - . ID=gene-CCO34_RS01635;Name=CCO34_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01635;old_locus_tag=CCO34_01635 NZ_NPMD01000001.1 Protein Homology CDS 314470 315510 . - 0 ID=cds-WP_000998242.1;Parent=gene-CCO34_RS01635;Dbxref=GenBank:WP_000998242.1;Name=WP_000998242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=CCO34_RS01635;product=oxidoreductase;protein_id=WP_000998242.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 315718 315843 . + . ID=gene-CCO34_RS01640;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=CCO34_RS01640;old_locus_tag=CCO34_01640 NZ_NPMD01000001.1 Protein Homology CDS 315718 315843 . + 0 ID=cds-WP_001708800.1;Parent=gene-CCO34_RS01640;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=CCO34_RS01640;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 316144 316359 . + . ID=gene-CCO34_RS01645;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=CCO34_RS01645;old_locus_tag=CCO34_01645 NZ_NPMD01000001.1 Protein Homology CDS 316144 316359 . + 0 ID=cds-WP_000217946.1;Parent=gene-CCO34_RS01645;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=CCO34_RS01645;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 316448 316888 . + . ID=gene-CCO34_RS01650;Name=CCO34_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01650;old_locus_tag=CCO34_01650 NZ_NPMD01000001.1 Protein Homology CDS 316448 316888 . + 0 ID=cds-WP_000214061.1;Parent=gene-CCO34_RS01650;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=CCO34_RS01650;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 316965 317546 . + . ID=gene-CCO34_RS01655;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=CCO34_RS01655;old_locus_tag=CCO34_01655 NZ_NPMD01000001.1 Protein Homology CDS 316965 317546 . + 0 ID=cds-WP_000133179.1;Parent=gene-CCO34_RS01655;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=CCO34_RS01655;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 317546 318124 . + . ID=gene-CCO34_RS01660;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=CCO34_RS01660;old_locus_tag=CCO34_01660 NZ_NPMD01000001.1 Protein Homology CDS 317546 318124 . + 0 ID=cds-WP_001092597.1;Parent=gene-CCO34_RS01660;Dbxref=GenBank:WP_001092597.1;Name=WP_001092597.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=CCO34_RS01660;product=electron transport complex subunit RsxB;protein_id=WP_001092597.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 318117 320324 . + . ID=gene-CCO34_RS01665;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=CCO34_RS01665;old_locus_tag=CCO34_01665 NZ_NPMD01000001.1 Protein Homology CDS 318117 320324 . + 0 ID=cds-WP_094965390.1;Parent=gene-CCO34_RS01665;Dbxref=GenBank:WP_094965390.1;Name=WP_094965390.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=CCO34_RS01665;product=electron transport complex subunit RsxC;protein_id=WP_094965390.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 320325 321383 . + . ID=gene-CCO34_RS01670;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=CCO34_RS01670;old_locus_tag=CCO34_01670 NZ_NPMD01000001.1 Protein Homology CDS 320325 321383 . + 0 ID=cds-WP_000231891.1;Parent=gene-CCO34_RS01670;Dbxref=GenBank:WP_000231891.1;Name=WP_000231891.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=CCO34_RS01670;product=electron transport complex subunit RsxD;protein_id=WP_000231891.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 321387 322007 . + . ID=gene-CCO34_RS01675;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=CCO34_RS01675;old_locus_tag=CCO34_01675 NZ_NPMD01000001.1 Protein Homology CDS 321387 322007 . + 0 ID=cds-WP_000920822.1;Parent=gene-CCO34_RS01675;Dbxref=GenBank:WP_000920822.1;Name=WP_000920822.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=CCO34_RS01675;product=electron transport complex subunit RsxG;protein_id=WP_000920822.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 322010 322702 . + . ID=gene-CCO34_RS01680;Name=CCO34_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01680;old_locus_tag=CCO34_01680 NZ_NPMD01000001.1 Protein Homology CDS 322010 322702 . + 0 ID=cds-WP_001289628.1;Parent=gene-CCO34_RS01680;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=CCO34_RS01680;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 322702 323337 . + . ID=gene-CCO34_RS01685;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CCO34_RS01685;old_locus_tag=CCO34_01685 NZ_NPMD01000001.1 Protein Homology CDS 322702 323337 . + 0 ID=cds-WP_001030318.1;Parent=gene-CCO34_RS01685;Dbxref=GenBank:WP_001030318.1;Name=WP_001030318.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=CCO34_RS01685;product=endonuclease III;protein_id=WP_001030318.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 323939 325444 . + . ID=gene-CCO34_RS01690;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=CCO34_RS01690;old_locus_tag=CCO34_01690 NZ_NPMD01000001.1 Protein Homology CDS 323939 325444 . + 0 ID=cds-WP_023181093.1;Parent=gene-CCO34_RS01690;Dbxref=GenBank:WP_023181093.1;Name=WP_023181093.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=CCO34_RS01690;product=dipeptide/tripeptide permease DtpA;protein_id=WP_023181093.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 325549 326154 . + . ID=gene-CCO34_RS01695;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=CCO34_RS01695;old_locus_tag=CCO34_01695 NZ_NPMD01000001.1 Protein Homology CDS 325549 326154 . + 0 ID=cds-WP_000765720.1;Parent=gene-CCO34_RS01695;Dbxref=GenBank:WP_000765720.1;Name=WP_000765720.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=CCO34_RS01695;product=glutathione transferase GstA;protein_id=WP_000765720.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 326213 327073 . - . ID=gene-CCO34_RS01700;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=CCO34_RS01700;old_locus_tag=CCO34_01700 NZ_NPMD01000001.1 Protein Homology CDS 326213 327073 . - 0 ID=cds-WP_000789732.1;Parent=gene-CCO34_RS01700;Dbxref=GenBank:WP_000789732.1;Name=WP_000789732.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=CCO34_RS01700;product=pyridoxal kinase PdxY;protein_id=WP_000789732.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 327133 328407 . - . ID=gene-CCO34_RS01705;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CCO34_RS01705;old_locus_tag=CCO34_01705 NZ_NPMD01000001.1 Protein Homology CDS 327133 328407 . - 0 ID=cds-WP_000168626.1;Parent=gene-CCO34_RS01705;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=CCO34_RS01705;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 328534 329190 . - . ID=gene-CCO34_RS01710;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=CCO34_RS01710;old_locus_tag=CCO34_01710 NZ_NPMD01000001.1 Protein Homology CDS 328534 329190 . - 0 ID=cds-WP_001282334.1;Parent=gene-CCO34_RS01710;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=CCO34_RS01710;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 329249 329578 . - . ID=gene-CCO34_RS01715;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=CCO34_RS01715;old_locus_tag=CCO34_01715 NZ_NPMD01000001.1 Protein Homology CDS 329249 329578 . - 0 ID=cds-WP_001132086.1;Parent=gene-CCO34_RS01715;Dbxref=GenBank:WP_001132086.1;Name=WP_001132086.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=CCO34_RS01715;product=C-type lysozyme inhibitor;protein_id=WP_001132086.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 329666 330787 . - . ID=gene-CCO34_RS01720;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=CCO34_RS01720;old_locus_tag=CCO34_01720 NZ_NPMD01000001.1 Protein Homology CDS 329666 330787 . - 0 ID=cds-WP_000835021.1;Parent=gene-CCO34_RS01720;Dbxref=GenBank:WP_000835021.1;Name=WP_000835021.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=CCO34_RS01720;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835021.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 331059 331526 . + . ID=gene-CCO34_RS01725;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=CCO34_RS01725;old_locus_tag=CCO34_01725 NZ_NPMD01000001.1 Protein Homology CDS 331059 331526 . + 0 ID=cds-WP_000597179.1;Parent=gene-CCO34_RS01725;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=CCO34_RS01725;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 331574 332014 . - . ID=gene-CCO34_RS01730;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=CCO34_RS01730;old_locus_tag=CCO34_01730 NZ_NPMD01000001.1 Protein Homology CDS 331574 332014 . - 0 ID=cds-WP_000764554.1;Parent=gene-CCO34_RS01730;Dbxref=GenBank:WP_000764554.1;Name=WP_000764554.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=CCO34_RS01730;product=transcriptional regulator SlyA;protein_id=WP_000764554.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 332209 332445 . + . ID=gene-CCO34_RS01735;Name=CCO34_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01735;old_locus_tag=CCO34_01735 NZ_NPMD01000001.1 Protein Homology CDS 332209 332445 . + 0 ID=cds-WP_000649755.1;Parent=gene-CCO34_RS01735;Dbxref=GenBank:WP_000649755.1;Name=WP_000649755.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=CCO34_RS01735;product=DUF1656 domain-containing protein;protein_id=WP_000649755.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 332448 333308 . + . ID=gene-CCO34_RS01740;Name=CCO34_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01740;old_locus_tag=CCO34_01740 NZ_NPMD01000001.1 Protein Homology CDS 332448 333308 . + 0 ID=cds-WP_001520441.1;Parent=gene-CCO34_RS01740;Dbxref=GenBank:WP_001520441.1;Name=WP_001520441.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=CCO34_RS01740;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001520441.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 333308 335347 . + . ID=gene-CCO34_RS01745;Name=CCO34_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01745;old_locus_tag=CCO34_01745 NZ_NPMD01000001.1 Protein Homology CDS 333308 335347 . + 0 ID=cds-WP_000777625.1;Parent=gene-CCO34_RS01745;Dbxref=GenBank:WP_000777625.1;Name=WP_000777625.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=CCO34_RS01745;product=FUSC family protein;protein_id=WP_000777625.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 335323 335844 . - . ID=gene-CCO34_RS01750;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=CCO34_RS01750;old_locus_tag=CCO34_01750 NZ_NPMD01000001.1 Protein Homology CDS 335323 335844 . - 0 ID=cds-WP_000826822.1;Parent=gene-CCO34_RS01750;Dbxref=GenBank:WP_000826822.1;Name=WP_000826822.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=CCO34_RS01750;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826822.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 335924 336820 . - . ID=gene-CCO34_RS01755;Name=CCO34_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01755;old_locus_tag=CCO34_01755 NZ_NPMD01000001.1 Protein Homology CDS 335924 336820 . - 0 ID=cds-WP_000250721.1;Parent=gene-CCO34_RS01755;Dbxref=GenBank:WP_000250721.1;Name=WP_000250721.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=CCO34_RS01755;product=aldo/keto reductase;protein_id=WP_000250721.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 336871 337110 . - . ID=gene-CCO34_RS01760;Name=CCO34_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01760;old_locus_tag=CCO34_01760 NZ_NPMD01000001.1 Protein Homology CDS 336871 337110 . - 0 ID=cds-WP_001519323.1;Parent=gene-CCO34_RS01760;Dbxref=GenBank:WP_001519323.1;Name=WP_001519323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=CCO34_RS01760;product=DUF1289 domain-containing protein;protein_id=WP_001519323.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 337213 337812 . + . ID=gene-CCO34_RS01765;Name=CCO34_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01765;old_locus_tag=CCO34_01765 NZ_NPMD01000001.1 Protein Homology CDS 337213 337812 . + 0 ID=cds-WP_001041832.1;Parent=gene-CCO34_RS01765;Dbxref=GenBank:WP_001041832.1;Name=WP_001041832.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=CCO34_RS01765;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041832.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 337871 338968 . + . ID=gene-CCO34_RS01770;Name=CCO34_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01770;old_locus_tag=CCO34_01770 NZ_NPMD01000001.1 Protein Homology CDS 337871 338968 . + 0 ID=cds-WP_080180968.1;Parent=gene-CCO34_RS01770;Dbxref=GenBank:WP_080180968.1;Name=WP_080180968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=CCO34_RS01770;product=alkene reductase;protein_id=WP_080180968.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 339037 339444 . + . ID=gene-CCO34_RS01775;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=CCO34_RS01775;old_locus_tag=CCO34_01775 NZ_NPMD01000001.1 Protein Homology CDS 339037 339444 . + 0 ID=cds-WP_001237787.1;Parent=gene-CCO34_RS01775;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=CCO34_RS01775;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 339545 340192 . + . ID=gene-CCO34_RS01780;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=CCO34_RS01780;old_locus_tag=CCO34_01780 NZ_NPMD01000001.1 Protein Homology CDS 339545 340192 . + 0 ID=cds-WP_001282267.1;Parent=gene-CCO34_RS01780;Dbxref=GenBank:WP_001282267.1;Name=WP_001282267.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=CCO34_RS01780;product=ribonuclease T;protein_id=WP_001282267.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 340273 340620 . - . ID=gene-CCO34_RS01790;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=CCO34_RS01790;old_locus_tag=CCO34_01790 NZ_NPMD01000001.1 Protein Homology CDS 340273 340620 . - 0 ID=cds-WP_000108176.1;Parent=gene-CCO34_RS01790;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=CCO34_RS01790;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 340955 341776 . + . ID=gene-CCO34_RS01795;Name=CCO34_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01795;old_locus_tag=CCO34_01795 NZ_NPMD01000001.1 Protein Homology CDS 340955 341776 . + 0 ID=cds-WP_001537211.1;Parent=gene-CCO34_RS01795;Dbxref=GenBank:WP_001537211.1;Name=WP_001537211.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=CCO34_RS01795;product=C40 family peptidase;protein_id=WP_001537211.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 341903 342484 . + . ID=gene-CCO34_RS01800;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=CCO34_RS01800;old_locus_tag=CCO34_01800 NZ_NPMD01000001.1 Protein Homology CDS 341903 342484 . + 0 ID=cds-WP_000007299.1;Parent=gene-CCO34_RS01800;Dbxref=GenBank:WP_000007299.1;Name=WP_000007299.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=CCO34_RS01800;product=superoxide dismutase [Fe];protein_id=WP_000007299.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 342567 342656 . - . ID=gene-CCO34_RS01805;Name=CCO34_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01805;old_locus_tag=CCO34_01805 NZ_NPMD01000001.1 Protein Homology CDS 342567 342656 . - 0 ID=cds-WP_000102277.1;Parent=gene-CCO34_RS01805;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=CCO34_RS01805;product=YnhF family membrane protein;protein_id=WP_000102277.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 342952 343977 . + . ID=gene-CCO34_RS01815;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CCO34_RS01815;old_locus_tag=CCO34_01815 NZ_NPMD01000001.1 Protein Homology CDS 342952 343977 . + 0 ID=cds-WP_000190993.1;Parent=gene-CCO34_RS01815;Dbxref=GenBank:WP_000190993.1;Name=WP_000190993.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=CCO34_RS01815;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190993.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 343974 344906 . - . ID=gene-CCO34_RS01820;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=CCO34_RS01820;old_locus_tag=CCO34_01820 NZ_NPMD01000001.1 Protein Homology CDS 343974 344906 . - 0 ID=cds-WP_000269525.1;Parent=gene-CCO34_RS01820;Dbxref=GenBank:WP_000269525.1;Name=WP_000269525.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=CCO34_RS01820;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269525.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 345019 346224 . + . ID=gene-CCO34_RS01825;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=CCO34_RS01825;old_locus_tag=CCO34_01825 NZ_NPMD01000001.1 Protein Homology CDS 345019 346224 . + 0 ID=cds-WP_001182316.1;Parent=gene-CCO34_RS01825;Dbxref=GenBank:WP_001182316.1;Name=WP_001182316.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=CCO34_RS01825;product=purine nucleoside transporter PunC;protein_id=WP_001182316.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 346514 347662 . + . ID=gene-CCO34_RS01830;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=CCO34_RS01830;old_locus_tag=CCO34_01830 NZ_NPMD01000001.1 Protein Homology CDS 346514 347662 . + 0 ID=cds-WP_000098879.1;Parent=gene-CCO34_RS01830;Dbxref=GenBank:WP_000098879.1;Name=WP_000098879.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=CCO34_RS01830;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098879.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 347704 348345 . - . ID=gene-CCO34_RS01835;Name=CCO34_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01835;old_locus_tag=CCO34_01835 NZ_NPMD01000001.1 Protein Homology CDS 347704 348345 . - 0 ID=cds-WP_000493967.1;Parent=gene-CCO34_RS01835;Dbxref=GenBank:WP_000493967.1;Name=WP_000493967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=CCO34_RS01835;product=riboflavin synthase;protein_id=WP_000493967.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 348562 349935 . + . ID=gene-CCO34_RS01840;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=CCO34_RS01840;old_locus_tag=CCO34_01840 NZ_NPMD01000001.1 Protein Homology CDS 348562 349935 . + 0 ID=cds-WP_001175077.1;Parent=gene-CCO34_RS01840;Dbxref=GenBank:WP_001175077.1;Name=WP_001175077.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=CCO34_RS01840;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175077.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 350087 350163 . + . ID=gene-CCO34_RS01845;Name=CCO34_RS01845;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS01845;old_locus_tag=CCO34_01845 NZ_NPMD01000001.1 tRNAscan-SE tRNA 350087 350163 . + . ID=rna-CCO34_RS01845;Parent=gene-CCO34_RS01845;anticodon=(pos:350121..350123);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS01845;product=tRNA-Val NZ_NPMD01000001.1 tRNAscan-SE exon 350087 350163 . + . ID=exon-CCO34_RS01845-1;Parent=rna-CCO34_RS01845;anticodon=(pos:350121..350123);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS01845;product=tRNA-Val NZ_NPMD01000001.1 RefSeq gene 350174 350250 . + . ID=gene-CCO34_RS01850;Name=CCO34_RS01850;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS01850;old_locus_tag=CCO34_01850 NZ_NPMD01000001.1 tRNAscan-SE tRNA 350174 350250 . + . ID=rna-CCO34_RS01850;Parent=gene-CCO34_RS01850;anticodon=(pos:350208..350210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS01850;product=tRNA-Val NZ_NPMD01000001.1 tRNAscan-SE exon 350174 350250 . + . ID=exon-CCO34_RS01850-1;Parent=rna-CCO34_RS01850;anticodon=(pos:350208..350210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS01850;product=tRNA-Val NZ_NPMD01000001.1 RefSeq gene 350408 351466 . - . ID=gene-CCO34_RS01855;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=CCO34_RS01855;old_locus_tag=CCO34_01855 NZ_NPMD01000001.1 Protein Homology CDS 350408 351466 . - 0 ID=cds-WP_001291716.1;Parent=gene-CCO34_RS01855;Dbxref=GenBank:WP_001291716.1;Name=WP_001291716.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=CCO34_RS01855;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_001291716.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 351463 352242 . - . ID=gene-CCO34_RS01860;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=CCO34_RS01860;old_locus_tag=CCO34_01860 NZ_NPMD01000001.1 Protein Homology CDS 351463 352242 . - 0 ID=cds-WP_000068766.1;Parent=gene-CCO34_RS01860;Dbxref=GenBank:WP_000068766.1;Name=WP_000068766.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=CCO34_RS01860;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_000068766.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 352243 352509 . - . ID=gene-CCO34_RS01865;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=CCO34_RS01865;old_locus_tag=CCO34_01865 NZ_NPMD01000001.1 Protein Homology CDS 352243 352509 . - 0 ID=cds-WP_000999982.1;Parent=gene-CCO34_RS01865;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=CCO34_RS01865;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 352506 353153 . - . ID=gene-CCO34_RS01870;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=CCO34_RS01870;old_locus_tag=CCO34_01870 NZ_NPMD01000001.1 Protein Homology CDS 352506 353153 . - 0 ID=cds-WP_000056367.1;Parent=gene-CCO34_RS01870;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=CCO34_RS01870;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 353221 354189 . - . ID=gene-CCO34_RS01875;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=CCO34_RS01875;old_locus_tag=CCO34_01875 NZ_NPMD01000001.1 Protein Homology CDS 353221 354189 . - 0 ID=cds-WP_000944190.1;Parent=gene-CCO34_RS01875;Dbxref=GenBank:WP_000944190.1;Name=WP_000944190.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=CCO34_RS01875;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_000944190.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 354170 354544 . - . ID=gene-CCO34_RS01880;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=CCO34_RS01880;old_locus_tag=CCO34_01880 NZ_NPMD01000001.1 Protein Homology CDS 354170 354544 . - 0 ID=cds-WP_001223304.1;Parent=gene-CCO34_RS01880;Dbxref=GenBank:WP_001223304.1;Name=WP_001223304.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=CCO34_RS01880;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223304.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 354525 354902 . - . ID=gene-CCO34_RS01885;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=CCO34_RS01885;old_locus_tag=CCO34_01885 NZ_NPMD01000001.1 Protein Homology CDS 354525 354902 . - 0 ID=cds-WP_000449089.1;Parent=gene-CCO34_RS01885;Dbxref=GenBank:WP_000449089.1;Name=WP_000449089.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=CCO34_RS01885;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449089.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 354905 356206 . - . ID=gene-CCO34_RS01890;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=CCO34_RS01890;old_locus_tag=CCO34_01890 NZ_NPMD01000001.1 Protein Homology CDS 354905 356206 . - 0 ID=cds-WP_000787213.1;Parent=gene-CCO34_RS01890;Dbxref=GenBank:WP_000787213.1;Name=WP_000787213.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=CCO34_RS01890;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_000787213.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 356196 358241 . - . ID=gene-CCO34_RS01895;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=CCO34_RS01895;old_locus_tag=CCO34_01895 NZ_NPMD01000001.1 Protein Homology CDS 356196 358241 . - 0 ID=cds-WP_001258231.1;Parent=gene-CCO34_RS01895;Dbxref=GenBank:WP_001258231.1;Name=WP_001258231.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=CCO34_RS01895;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_001258231.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 358226 358594 . - . ID=gene-CCO34_RS01900;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=CCO34_RS01900;old_locus_tag=CCO34_01900 NZ_NPMD01000001.1 Protein Homology CDS 358226 358594 . - 0 ID=cds-WP_000383702.1;Parent=gene-CCO34_RS01900;Dbxref=GenBank:WP_000383702.1;Name=WP_000383702.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=CCO34_RS01900;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383702.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 358652 359668 . - . ID=gene-CCO34_RS01905;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=CCO34_RS01905;old_locus_tag=CCO34_01905 NZ_NPMD01000001.1 Protein Homology CDS 358652 359668 . - 0 ID=cds-WP_000238879.1;Parent=gene-CCO34_RS01905;Dbxref=GenBank:WP_000238879.1;Name=WP_000238879.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=CCO34_RS01905;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_000238879.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 359634 360308 . - . ID=gene-CCO34_RS01910;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=CCO34_RS01910;old_locus_tag=CCO34_01910 NZ_NPMD01000001.1 Protein Homology CDS 359634 360308 . - 0 ID=cds-WP_000011211.1;Parent=gene-CCO34_RS01910;Dbxref=GenBank:WP_000011211.1;Name=WP_000011211.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=CCO34_RS01910;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_000011211.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 360305 360853 . - . ID=gene-CCO34_RS01915;Name=CCO34_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01915;old_locus_tag=CCO34_01915 NZ_NPMD01000001.1 Protein Homology CDS 360305 360853 . - 0 ID=cds-WP_001535905.1;Parent=gene-CCO34_RS01915;Dbxref=GenBank:WP_001535905.1;Name=WP_001535905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=CCO34_RS01915;product=type III secretion system domain-containing protein;protein_id=WP_001535905.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 360871 361620 . - . ID=gene-CCO34_RS01920;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=CCO34_RS01920;old_locus_tag=CCO34_01920 NZ_NPMD01000001.1 Protein Homology CDS 360871 361620 . - 0 ID=cds-WP_000862878.1;Parent=gene-CCO34_RS01920;Dbxref=GenBank:WP_000862878.1;Name=WP_000862878.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=CCO34_RS01920;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_000862878.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 361617 361865 . - . ID=gene-CCO34_RS01925;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=CCO34_RS01925;old_locus_tag=CCO34_01925 NZ_NPMD01000001.1 Protein Homology CDS 361617 361865 . - 0 ID=cds-WP_001574409.1;Parent=gene-CCO34_RS01925;Dbxref=GenBank:WP_001574409.1;Name=WP_001574409.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460373.1;locus_tag=CCO34_RS01925;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_001574409.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 361877 362167 . - . ID=gene-CCO34_RS01930;Name=CCO34_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS01930;old_locus_tag=CCO34_01930 NZ_NPMD01000001.1 Protein Homology CDS 361877 362167 . - 0 ID=cds-WP_000444713.1;Parent=gene-CCO34_RS01930;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=CCO34_RS01930;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 362145 362360 . - . ID=gene-CCO34_RS01935;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=CCO34_RS01935;old_locus_tag=CCO34_01935 NZ_NPMD01000001.1 Protein Homology CDS 362145 362360 . - 0 ID=cds-WP_000350226.1;Parent=gene-CCO34_RS01935;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=CCO34_RS01935;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 362454 363143 . - . ID=gene-CCO34_RS01940;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=CCO34_RS01940;old_locus_tag=CCO34_01940 NZ_NPMD01000001.1 Protein Homology CDS 362454 363143 . - 0 ID=cds-WP_094965391.1;Parent=gene-CCO34_RS01940;Dbxref=GenBank:WP_094965391.1;Name=WP_094965391.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=CCO34_RS01940;product=pathogenicity island 2 effector protein SseG;protein_id=WP_094965391.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 363140 363922 . - . ID=gene-CCO34_RS01945;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=CCO34_RS01945;old_locus_tag=CCO34_01945 NZ_NPMD01000001.1 Protein Homology CDS 363140 363922 . - 0 ID=cds-WP_000690718.1;Parent=gene-CCO34_RS01945;Dbxref=GenBank:WP_000690718.1;Name=WP_000690718.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=CCO34_RS01945;product=type III secretion systems effector SseF;protein_id=WP_000690718.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 363938 364372 . - . ID=gene-CCO34_RS01950;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=CCO34_RS01950;old_locus_tag=CCO34_01950 NZ_NPMD01000001.1 Protein Homology CDS 363938 364372 . - 0 ID=cds-WP_000979963.1;Parent=gene-CCO34_RS01950;Dbxref=GenBank:WP_000979963.1;Name=WP_000979963.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=CCO34_RS01950;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979963.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 364424 364840 . - . ID=gene-CCO34_RS01955;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=CCO34_RS01955;old_locus_tag=CCO34_01955 NZ_NPMD01000001.1 Protein Homology CDS 364424 364840 . - 0 ID=cds-WP_000249606.1;Parent=gene-CCO34_RS01955;Dbxref=GenBank:WP_000249606.1;Name=WP_000249606.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=CCO34_RS01955;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_000249606.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 364843 365430 . - . ID=gene-CCO34_RS01960;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=CCO34_RS01960;old_locus_tag=CCO34_01960 NZ_NPMD01000001.1 Protein Homology CDS 364843 365430 . - 0 ID=cds-WP_000388323.1;Parent=gene-CCO34_RS01960;Dbxref=GenBank:WP_000388323.1;Name=WP_000388323.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=CCO34_RS01960;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_000388323.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 365446 366900 . - . ID=gene-CCO34_RS01965;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=CCO34_RS01965;old_locus_tag=CCO34_01965 NZ_NPMD01000001.1 Protein Homology CDS 365446 366900 . - 0 ID=cds-WP_001079772.1;Parent=gene-CCO34_RS01965;Dbxref=GenBank:WP_001079772.1;Name=WP_001079772.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=CCO34_RS01965;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WP_001079772.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 366903 367376 . - . ID=gene-CCO34_RS01970;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=CCO34_RS01970;old_locus_tag=CCO34_01970 NZ_NPMD01000001.1 Protein Homology CDS 366903 367376 . - 0 ID=cds-WP_000711024.1;Parent=gene-CCO34_RS01970;Dbxref=GenBank:WP_000711024.1;Name=WP_000711024.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=CCO34_RS01970;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_000711024.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 367373 367963 . - . ID=gene-CCO34_RS01975;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO34_RS01975;old_locus_tag=CCO34_01975 NZ_NPMD01000001.1 Protein Homology CDS 367373 367963 . - 0 ID=cds-WP_000094434.1;Parent=gene-CCO34_RS01975;Dbxref=GenBank:WP_000094434.1;Name=WP_000094434.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=CCO34_RS01975;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_000094434.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 367970 368296 . - . ID=gene-CCO34_RS01980;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO34_RS01980;old_locus_tag=CCO34_01980 NZ_NPMD01000001.1 Protein Homology CDS 367970 368296 . - 0 ID=cds-WP_000972855.1;Parent=gene-CCO34_RS01980;Dbxref=GenBank:WP_000972855.1;Name=WP_000972855.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=CCO34_RS01980;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972855.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 368560 368802 . - . ID=gene-CCO34_RS01985;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=CCO34_RS01985;old_locus_tag=CCO34_01985 NZ_NPMD01000001.1 Protein Homology CDS 368560 368802 . - 0 ID=cds-WP_000210202.1;Parent=gene-CCO34_RS01985;Dbxref=GenBank:WP_000210202.1;Name=WP_000210202.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=CCO34_RS01985;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_000210202.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 368810 370021 . - . ID=gene-CCO34_RS01990;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=CCO34_RS01990;old_locus_tag=CCO34_01990 NZ_NPMD01000001.1 Protein Homology CDS 368810 370021 . - 0 ID=cds-WP_000323791.1;Parent=gene-CCO34_RS01990;Dbxref=GenBank:WP_000323791.1;Name=WP_000323791.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=CCO34_RS01990;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_000323791.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 370002 371495 . - . ID=gene-CCO34_RS01995;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=CCO34_RS01995;old_locus_tag=CCO34_01995 NZ_NPMD01000001.1 Protein Homology CDS 370002 371495 . - 0 ID=cds-WP_000261279.1;Parent=gene-CCO34_RS01995;Dbxref=GenBank:WP_000261279.1;Name=WP_000261279.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=CCO34_RS01995;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261279.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 371497 371898 . - . ID=gene-CCO34_RS02000;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=CCO34_RS02000;old_locus_tag=CCO34_02000 NZ_NPMD01000001.1 Protein Homology CDS 371497 371898 . - 0 ID=cds-WP_001738217.1;Parent=gene-CCO34_RS02000;Dbxref=GenBank:WP_001738217.1;Name=WP_001738217.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=CCO34_RS02000;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001738217.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 372299 375061 . + . ID=gene-CCO34_RS02005;Name=CCO34_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02005;old_locus_tag=CCO34_02005 NZ_NPMD01000001.1 Protein Homology CDS 372299 375061 . + 0 ID=cds-WP_001050765.1;Parent=gene-CCO34_RS02005;Dbxref=GenBank:WP_001050765.1;Name=WP_001050765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=CCO34_RS02005;product=two component system sensor kinase;protein_id=WP_001050765.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 375092 375730 . + . ID=gene-CCO34_RS02010;Name=CCO34_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02010;old_locus_tag=CCO34_02010 NZ_NPMD01000001.1 Protein Homology CDS 375092 375730 . + 0 ID=cds-WP_000666335.1;Parent=gene-CCO34_RS02010;Dbxref=GenBank:WP_000666335.1;Name=WP_000666335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=CCO34_RS02010;product=two component system response regulator;protein_id=WP_000666335.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 375909 376637 . + . ID=gene-CCO34_RS02015;Name=CCO34_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02015;old_locus_tag=CCO34_02015 NZ_NPMD01000001.1 Protein Homology CDS 375909 376637 . + 0 ID=cds-WP_000122320.1;Parent=gene-CCO34_RS02015;Dbxref=GenBank:WP_000122320.1;Name=WP_000122320.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=CCO34_RS02015;product=MerR family transcriptional regulator;protein_id=WP_000122320.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 376809 377768 . + . ID=gene-CCO34_RS02020;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=CCO34_RS02020;old_locus_tag=CCO34_02020 NZ_NPMD01000001.1 Protein Homology CDS 376809 377768 . + 0 ID=cds-WP_001060714.1;Parent=gene-CCO34_RS02020;Dbxref=GenBank:WP_001060714.1;Name=WP_001060714.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=CCO34_RS02020;product=transcriptional regulator MlrB;protein_id=WP_001060714.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 377864 378076 . - . ID=gene-CCO34_RS02025;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=CCO34_RS02025;old_locus_tag=CCO34_02025 NZ_NPMD01000001.1 Protein Homology CDS 377864 378076 . - 0 ID=cds-WP_000164230.1;Parent=gene-CCO34_RS02025;Dbxref=GenBank:WP_000164230.1;Name=WP_000164230.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=CCO34_RS02025;product=fumarate hydratase FumD;protein_id=WP_000164230.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 378174 378794 . - . ID=gene-CCO34_RS02030;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=CCO34_RS02030;old_locus_tag=CCO34_02030 NZ_NPMD01000001.1 Protein Homology CDS 378174 378794 . - 0 ID=cds-WP_000190924.1;Parent=gene-CCO34_RS02030;Dbxref=GenBank:WP_000190924.1;Name=WP_000190924.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=CCO34_RS02030;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190924.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 378769 380547 . - . ID=gene-CCO34_RS02035;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=CCO34_RS02035;old_locus_tag=CCO34_02035 NZ_NPMD01000001.1 Protein Homology CDS 378769 380547 . - 0 ID=cds-WP_001214417.1;Parent=gene-CCO34_RS02035;Dbxref=GenBank:WP_001214417.1;Name=WP_001214417.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=CCO34_RS02035;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_001214417.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 380729 381463 . + . ID=gene-CCO34_RS02040;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=CCO34_RS02040;old_locus_tag=CCO34_02040 NZ_NPMD01000001.1 Protein Homology CDS 380729 381463 . + 0 ID=cds-WP_001520059.1;Parent=gene-CCO34_RS02040;Dbxref=GenBank:WP_001520059.1;Name=WP_001520059.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=CCO34_RS02040;product=tetrathionate reductase subunit TtrB;protein_id=WP_001520059.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 381464 382486 . + . ID=gene-CCO34_RS02045;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=CCO34_RS02045;old_locus_tag=CCO34_02045 NZ_NPMD01000001.1 Protein Homology CDS 381464 382486 . + 0 ID=cds-WP_000149776.1;Parent=gene-CCO34_RS02045;Dbxref=GenBank:WP_000149776.1;Name=WP_000149776.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=CCO34_RS02045;product=tetrathionate reductase subunit TtrC;protein_id=WP_000149776.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 382479 385541 . + . ID=gene-CCO34_RS02050;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=CCO34_RS02050;old_locus_tag=CCO34_02050 NZ_NPMD01000001.1 Protein Homology CDS 382479 385541 . + 0 ID=cds-WP_000002367.1;Parent=gene-CCO34_RS02050;Dbxref=GenBank:WP_000002367.1;Name=WP_000002367.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=CCO34_RS02050;product=tetrathionate reductase subunit TtrA;protein_id=WP_000002367.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 385864 387090 . + . ID=gene-CCO34_RS02055;Name=CCO34_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02055;old_locus_tag=CCO34_02055 NZ_NPMD01000001.1 Protein Homology CDS 385864 387090 . + 0 ID=cds-WP_000471815.1;Parent=gene-CCO34_RS02055;Dbxref=GenBank:WP_000471815.1;Name=WP_000471815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=CCO34_RS02055;product=PfkB family carbohydrate kinase;protein_id=WP_000471815.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 387102 387839 . + . ID=gene-CCO34_RS02060;Name=CCO34_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02060;old_locus_tag=CCO34_02060 NZ_NPMD01000001.1 Protein Homology CDS 387102 387839 . + 0 ID=cds-WP_000697187.1;Parent=gene-CCO34_RS02060;Dbxref=GenBank:WP_000697187.1;Name=WP_000697187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=CCO34_RS02060;product=glutamine amidotransferase;protein_id=WP_000697187.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 387898 388791 . + . ID=gene-CCO34_RS02065;Name=CCO34_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02065;old_locus_tag=CCO34_02065 NZ_NPMD01000001.1 Protein Homology CDS 387898 388791 . + 0 ID=cds-WP_001000508.1;Parent=gene-CCO34_RS02065;Dbxref=GenBank:WP_001000508.1;Name=WP_001000508.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=CCO34_RS02065;product=proline iminopeptidase-family hydrolase;protein_id=WP_001000508.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 388813 390156 . + . ID=gene-CCO34_RS02070;Name=CCO34_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02070;old_locus_tag=CCO34_02070 NZ_NPMD01000001.1 Protein Homology CDS 388813 390156 . + 0 ID=cds-WP_000756089.1;Parent=gene-CCO34_RS02070;Dbxref=GenBank:WP_000756089.1;Name=WP_000756089.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=CCO34_RS02070;product=APC family permease;protein_id=WP_000756089.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 390320 390550 . + . ID=gene-CCO34_RS26140;Name=CCO34_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26140 NZ_NPMD01000001.1 Protein Homology CDS 390320 390550 . + 0 ID=cds-WP_418143684.1;Parent=gene-CCO34_RS26140;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=CCO34_RS26140;product=hypothetical protein;protein_id=WP_418143684.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 390558 391970 . + . ID=gene-CCO34_RS02080;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=CCO34_RS02080;old_locus_tag=CCO34_02080 NZ_NPMD01000001.1 Protein Homology CDS 390558 391970 . + 0 ID=cds-WP_000751447.1;Parent=gene-CCO34_RS02080;Dbxref=GenBank:WP_000751447.1;Name=WP_000751447.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=CCO34_RS02080;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 392281 392517 . + . ID=gene-CCO34_RS02085;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=CCO34_RS02085;old_locus_tag=CCO34_02085 NZ_NPMD01000001.1 Protein Homology CDS 392281 392517 . + 0 ID=cds-WP_001082307.1;Parent=gene-CCO34_RS02085;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=CCO34_RS02085;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 392600 392842 . + . ID=gene-CCO34_RS02090;Name=CCO34_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02090;old_locus_tag=CCO34_02090 NZ_NPMD01000001.1 Protein Homology CDS 392600 392842 . + 0 ID=cds-WP_001521603.1;Parent=gene-CCO34_RS02090;Dbxref=GenBank:WP_001521603.1;Name=WP_001521603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082333.1;locus_tag=CCO34_RS02090;product=major outer membrane lipoprotein;protein_id=WP_001521603.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 392923 393162 . + . ID=gene-CCO34_RS02095;Name=CCO34_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02095;old_locus_tag=CCO34_02095 NZ_NPMD01000001.1 Protein Homology CDS 392923 393162 . + 0 ID=cds-WP_000198781.1;Parent=gene-CCO34_RS02095;Dbxref=GenBank:WP_000198781.1;Name=WP_000198781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=CCO34_RS02095;product=major outer membrane lipoprotein;protein_id=WP_000198781.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 393229 394230 . - . ID=gene-CCO34_RS02100;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=CCO34_RS02100;old_locus_tag=CCO34_02100 NZ_NPMD01000001.1 Protein Homology CDS 393229 394230 . - 0 ID=cds-WP_000817059.1;Parent=gene-CCO34_RS02100;Dbxref=GenBank:WP_000817059.1;Name=WP_000817059.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=CCO34_RS02100;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817059.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 394385 394801 . - . ID=gene-CCO34_RS02105;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=CCO34_RS02105;old_locus_tag=CCO34_02105 NZ_NPMD01000001.1 Protein Homology CDS 394385 394801 . - 0 ID=cds-WP_000729470.1;Parent=gene-CCO34_RS02105;Dbxref=GenBank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=CCO34_RS02105;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 394814 396034 . - . ID=gene-CCO34_RS02110;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=CCO34_RS02110;old_locus_tag=CCO34_02110 NZ_NPMD01000001.1 Protein Homology CDS 394814 396034 . - 0 ID=cds-WP_000143845.1;Parent=gene-CCO34_RS02110;Dbxref=GenBank:WP_000143845.1;Name=WP_000143845.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=CCO34_RS02110;product=cysteine desulfurase SufS;protein_id=WP_000143845.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 396031 397302 . - . ID=gene-CCO34_RS02115;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CCO34_RS02115;old_locus_tag=CCO34_02115 NZ_NPMD01000001.1 Protein Homology CDS 396031 397302 . - 0 ID=cds-WP_000907933.1;Parent=gene-CCO34_RS02115;Dbxref=GenBank:WP_000907933.1;Name=WP_000907933.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=CCO34_RS02115;product=Fe-S cluster assembly protein SufD;protein_id=WP_000907933.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 397277 398023 . - . ID=gene-CCO34_RS02120;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CCO34_RS02120;old_locus_tag=CCO34_02120 NZ_NPMD01000001.1 Protein Homology CDS 397277 398023 . - 0 ID=cds-WP_000948902.1;Parent=gene-CCO34_RS02120;Dbxref=GenBank:WP_000948902.1;Name=WP_000948902.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=CCO34_RS02120;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948902.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 398040 399527 . - . ID=gene-CCO34_RS02125;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CCO34_RS02125;old_locus_tag=CCO34_02125 NZ_NPMD01000001.1 Protein Homology CDS 398040 399527 . - 0 ID=cds-WP_000089383.1;Parent=gene-CCO34_RS02125;Dbxref=GenBank:WP_000089383.1;Name=WP_000089383.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=CCO34_RS02125;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089383.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 399536 399904 . - . ID=gene-CCO34_RS02130;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=CCO34_RS02130;old_locus_tag=CCO34_02130 NZ_NPMD01000001.1 Protein Homology CDS 399536 399904 . - 0 ID=cds-WP_000418970.1;Parent=gene-CCO34_RS02130;Dbxref=GenBank:WP_000418970.1;Name=WP_000418970.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=CCO34_RS02130;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418970.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 400331 401677 . + . ID=gene-CCO34_RS02135;Name=CCO34_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02135;old_locus_tag=CCO34_02135 NZ_NPMD01000001.1 Protein Homology CDS 400331 401677 . + 0 ID=cds-WP_080185544.1;Parent=gene-CCO34_RS02135;Dbxref=GenBank:WP_080185544.1;Name=WP_080185544.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=CCO34_RS02135;product=L-cystine transporter;protein_id=WP_080185544.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 401965 402153 . - . ID=gene-CCO34_RS02140;Name=CCO34_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02140;old_locus_tag=CCO34_02140 NZ_NPMD01000001.1 Protein Homology CDS 401965 402153 . - 0 ID=cds-WP_001537749.1;Parent=gene-CCO34_RS02140;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=CCO34_RS02140;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 402252 402662 . - . ID=gene-CCO34_RS02145;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CCO34_RS02145;old_locus_tag=CCO34_02145 NZ_NPMD01000001.1 Protein Homology CDS 402252 402662 . - 0 ID=cds-WP_000637930.1;Parent=gene-CCO34_RS02145;Dbxref=GenBank:WP_000637930.1;Name=WP_000637930.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=CCO34_RS02145;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637930.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 402659 405715 . - . ID=gene-CCO34_RS02150;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=CCO34_RS02150;old_locus_tag=CCO34_02150 NZ_NPMD01000001.1 Protein Homology CDS 402659 405715 . - 0 ID=cds-WP_000612914.1;Parent=gene-CCO34_RS02150;Dbxref=GenBank:WP_000612914.1;Name=WP_000612914.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=CCO34_RS02150;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_000612914.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 405980 407098 . + . ID=gene-CCO34_RS02155;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=CCO34_RS02155;old_locus_tag=CCO34_02155 NZ_NPMD01000001.1 Protein Homology CDS 405980 407098 . + 0 ID=cds-WP_000248615.1;Parent=gene-CCO34_RS02155;Dbxref=GenBank:WP_000248615.1;Name=WP_000248615.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=CCO34_RS02155;product=AI-2E family transporter YdiK;protein_id=WP_000248615.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 407281 407388 . + . ID=gene-CCO34_RS02160;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=CCO34_RS02160;old_locus_tag=CCO34_02160 NZ_NPMD01000001.1 cmsearch antisense_RNA 407281 407388 . + . ID=rna-CCO34_RS02160;Parent=gene-CCO34_RS02160;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS02160;product=antisense sRNA RprA NZ_NPMD01000001.1 cmsearch exon 407281 407388 . + . ID=exon-CCO34_RS02160-1;Parent=rna-CCO34_RS02160;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS02160;product=antisense sRNA RprA NZ_NPMD01000001.1 RefSeq gene 407556 407915 . + . ID=gene-CCO34_RS02165;Name=CCO34_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02165;old_locus_tag=CCO34_02165 NZ_NPMD01000001.1 Protein Homology CDS 407556 407915 . + 0 ID=cds-WP_000980459.1;Parent=gene-CCO34_RS02165;Dbxref=GenBank:WP_000980459.1;Name=WP_000980459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=CCO34_RS02165;product=YdiL family protein;protein_id=WP_000980459.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 408056 409267 . + . ID=gene-CCO34_RS02170;Name=CCO34_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02170;old_locus_tag=CCO34_02170 NZ_NPMD01000001.1 Protein Homology CDS 408056 409267 . + 0 ID=cds-WP_000797675.1;Parent=gene-CCO34_RS02170;Dbxref=GenBank:WP_000797675.1;Name=WP_000797675.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=CCO34_RS02170;product=MFS transporter;protein_id=WP_000797675.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 409631 410866 . + . ID=gene-CCO34_RS02175;Name=CCO34_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02175;old_locus_tag=CCO34_02175 NZ_NPMD01000001.1 Protein Homology CDS 409631 410866 . + 0 ID=cds-WP_000081209.1;Parent=gene-CCO34_RS02175;Dbxref=GenBank:WP_000081209.1;Name=WP_000081209.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=CCO34_RS02175;product=MFS transporter;protein_id=WP_000081209.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 410933 411799 . + . ID=gene-CCO34_RS02180;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=CCO34_RS02180;old_locus_tag=CCO34_02180 NZ_NPMD01000001.1 Protein Homology CDS 410933 411799 . + 0 ID=cds-WP_000383488.1;Parent=gene-CCO34_RS02180;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=CCO34_RS02180;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 411844 412602 . + . ID=gene-CCO34_RS02185;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CCO34_RS02185;old_locus_tag=CCO34_02185 NZ_NPMD01000001.1 Protein Homology CDS 411844 412602 . + 0 ID=cds-WP_000860221.1;Parent=gene-CCO34_RS02185;Dbxref=GenBank:WP_000860221.1;Name=WP_000860221.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=CCO34_RS02185;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860221.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 412756 414351 . + . ID=gene-CCO34_RS02190;Name=CCO34_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02190;old_locus_tag=CCO34_02190 NZ_NPMD01000001.1 Protein Homology CDS 412756 414351 . + 0 ID=cds-WP_000700599.1;Parent=gene-CCO34_RS02190;Dbxref=GenBank:WP_000700599.1;Name=WP_000700599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=CCO34_RS02190;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000700599.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 414365 415516 . + . ID=gene-CCO34_RS02195;Name=CCO34_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02195;old_locus_tag=CCO34_02195 NZ_NPMD01000001.1 Protein Homology CDS 414365 415516 . + 0 ID=cds-WP_000347819.1;Parent=gene-CCO34_RS02195;Dbxref=GenBank:WP_000347819.1;Name=WP_000347819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=CCO34_RS02195;product=acyl-CoA dehydrogenase;protein_id=WP_000347819.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 415592 416482 . - . ID=gene-CCO34_RS02200;Name=CCO34_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02200;old_locus_tag=CCO34_02200 NZ_NPMD01000001.1 Protein Homology CDS 415592 416482 . - 0 ID=cds-WP_000284836.1;Parent=gene-CCO34_RS02200;Dbxref=GenBank:WP_000284836.1;Name=WP_000284836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=CCO34_RS02200;product=AraC family transcriptional regulator;protein_id=WP_000284836.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 416945 417709 . + . ID=gene-CCO34_RS02205;Name=CCO34_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02205;old_locus_tag=CCO34_02205 NZ_NPMD01000001.1 Protein Homology CDS 416945 417709 . + 0 ID=cds-WP_000692096.1;Parent=gene-CCO34_RS02205;Dbxref=GenBank:WP_000692096.1;Name=WP_000692096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=CCO34_RS02205;product=electron transfer flavoprotein;protein_id=WP_000692096.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 417731 418666 . + . ID=gene-CCO34_RS02210;Name=CCO34_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02210;old_locus_tag=CCO34_02210 NZ_NPMD01000001.1 Protein Homology CDS 417731 418666 . + 0 ID=cds-WP_001015873.1;Parent=gene-CCO34_RS02210;Dbxref=GenBank:WP_001015873.1;Name=WP_001015873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=CCO34_RS02210;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015873.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 418723 420009 . + . ID=gene-CCO34_RS02215;Name=CCO34_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02215;old_locus_tag=CCO34_02215 NZ_NPMD01000001.1 Protein Homology CDS 418723 420009 . + 0 ID=cds-WP_001278555.1;Parent=gene-CCO34_RS02215;Dbxref=GenBank:WP_001278555.1;Name=WP_001278555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=CCO34_RS02215;product=FAD-dependent oxidoreductase;protein_id=WP_001278555.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 420006 420299 . + . ID=gene-CCO34_RS02220;Name=CCO34_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02220;old_locus_tag=CCO34_02220 NZ_NPMD01000001.1 Protein Homology CDS 420006 420299 . + 0 ID=cds-WP_000093362.1;Parent=gene-CCO34_RS02220;Dbxref=GenBank:WP_000093362.1;Name=WP_000093362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=CCO34_RS02220;product=ferredoxin family protein;protein_id=WP_000093362.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 420389 422029 . + . ID=gene-CCO34_RS02225;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=CCO34_RS02225;old_locus_tag=CCO34_02225 NZ_NPMD01000001.1 Protein Homology CDS 420389 422029 . + 0 ID=cds-WP_000117497.1;Parent=gene-CCO34_RS02225;Dbxref=GenBank:WP_000117497.1;Name=WP_000117497.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=CCO34_RS02225;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_000117497.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 422071 424449 . - . ID=gene-CCO34_RS02230;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=CCO34_RS02230;old_locus_tag=CCO34_02230 NZ_NPMD01000001.1 Protein Homology CDS 422071 424449 . - 0 ID=cds-WP_000069340.1;Parent=gene-CCO34_RS02230;Dbxref=GenBank:WP_000069340.1;Name=WP_000069340.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=CCO34_RS02230;product=phosphoenolpyruvate synthase;protein_id=WP_000069340.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 424786 425619 . + . ID=gene-CCO34_RS02235;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=CCO34_RS02235;old_locus_tag=CCO34_02235 NZ_NPMD01000001.1 Protein Homology CDS 424786 425619 . + 0 ID=cds-WP_000370992.1;Parent=gene-CCO34_RS02235;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=CCO34_RS02235;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 425775 426821 . + . ID=gene-CCO34_RS02240;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=CCO34_RS02240;old_locus_tag=CCO34_02240 NZ_NPMD01000001.1 Protein Homology CDS 425775 426821 . + 0 ID=cds-WP_001082196.1;Parent=gene-CCO34_RS02240;Dbxref=GenBank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=CCO34_RS02240;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 426978 427169 . + . ID=gene-CCO34_RS02245;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=CCO34_RS02245;old_locus_tag=CCO34_02245 NZ_NPMD01000001.1 Protein Homology CDS 426978 427169 . + 0 ID=cds-WP_000089115.1;Parent=gene-CCO34_RS02245;Dbxref=GenBank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=CCO34_RS02245;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 427204 428646 . - . ID=gene-CCO34_RS02250;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=CCO34_RS02250;old_locus_tag=CCO34_02250 NZ_NPMD01000001.1 Protein Homology CDS 427204 428646 . - 0 ID=cds-WP_000175680.1;Parent=gene-CCO34_RS02250;Dbxref=GenBank:WP_000175680.1;Name=WP_000175680.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=CCO34_RS02250;product=protein adenylyltransferase SelO;protein_id=WP_000175680.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 428708 429421 . - . ID=gene-CCO34_RS02255;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=CCO34_RS02255;old_locus_tag=CCO34_02255 NZ_NPMD01000001.1 Protein Homology CDS 428708 429421 . - 0 ID=cds-WP_000562003.1;Parent=gene-CCO34_RS02255;Dbxref=GenBank:WP_000562003.1;Name=WP_000562003.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=CCO34_RS02255;product=anti-FlhDC factor YdiV;protein_id=WP_000562003.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 429735 430199 . - . ID=gene-CCO34_RS02260;Name=CCO34_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02260;old_locus_tag=CCO34_02260 NZ_NPMD01000001.1 Protein Homology CDS 429735 430199 . - 0 ID=cds-WP_001213256.1;Parent=gene-CCO34_RS02260;Dbxref=GenBank:WP_001213256.1;Name=WP_001213256.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=CCO34_RS02260;product=C40 family peptidase;protein_id=WP_001213256.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 430276 431025 . - . ID=gene-CCO34_RS02265;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=CCO34_RS02265;old_locus_tag=CCO34_02265 NZ_NPMD01000001.1 Protein Homology CDS 430276 431025 . - 0 ID=cds-WP_000080607.1;Parent=gene-CCO34_RS02265;Dbxref=GenBank:WP_000080607.1;Name=WP_000080607.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=CCO34_RS02265;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000080607.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 431025 431576 . - . ID=gene-CCO34_RS02270;Name=CCO34_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02270;old_locus_tag=CCO34_02270 NZ_NPMD01000001.1 Protein Homology CDS 431025 431576 . - 0 ID=cds-WP_001181565.1;Parent=gene-CCO34_RS02270;Dbxref=GenBank:WP_001181565.1;Name=WP_001181565.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=CCO34_RS02270;product=glutathione peroxidase;protein_id=WP_001181565.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 431668 432648 . - . ID=gene-CCO34_RS02275;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=CCO34_RS02275;old_locus_tag=CCO34_02275 NZ_NPMD01000001.1 Protein Homology CDS 431668 432648 . - 0 ID=cds-WP_000954984.1;Parent=gene-CCO34_RS02275;Dbxref=GenBank:WP_000954984.1;Name=WP_000954984.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=CCO34_RS02275;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954984.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 432851 433150 . - . ID=gene-CCO34_RS02280;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=CCO34_RS02280;old_locus_tag=CCO34_02280 NZ_NPMD01000001.1 Protein Homology CDS 432851 433150 . - 0 ID=cds-WP_001229266.1;Parent=gene-CCO34_RS02280;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=CCO34_RS02280;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 433155 435542 . - . ID=gene-CCO34_RS02285;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CCO34_RS02285;old_locus_tag=CCO34_02285 NZ_NPMD01000001.1 Protein Homology CDS 433155 435542 . - 0 ID=cds-WP_000672402.1;Parent=gene-CCO34_RS02285;Dbxref=GenBank:WP_000672402.1;Name=WP_000672402.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=CCO34_RS02285;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672402.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 435558 436541 . - . ID=gene-CCO34_RS02290;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CCO34_RS02290;old_locus_tag=CCO34_02290 NZ_NPMD01000001.1 Protein Homology CDS 435558 436541 . - 0 ID=cds-WP_000018570.1;Parent=gene-CCO34_RS02290;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=CCO34_RS02290;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11 NZ_NPMD01000001.1 cmsearch sequence_feature 436604 436727 . - . ID=id-NZ_NPMD01000001.1:436604..436727;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMD01000001.1 RefSeq gene 436678 436722 . - . ID=gene-CCO34_RS25230;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=CCO34_RS25230 NZ_NPMD01000001.1 Protein Homology CDS 436678 436722 . - 0 ID=cds-WP_001386830.1;Parent=gene-CCO34_RS25230;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=CCO34_RS25230;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 436843 437199 . - . ID=gene-CCO34_RS02295;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CCO34_RS02295;old_locus_tag=CCO34_02295 NZ_NPMD01000001.1 Protein Homology CDS 436843 437199 . - 0 ID=cds-WP_000124850.1;Parent=gene-CCO34_RS02295;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=CCO34_RS02295;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 437250 437447 . - . ID=gene-CCO34_RS02300;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CCO34_RS02300;old_locus_tag=CCO34_02300 NZ_NPMD01000001.1 Protein Homology CDS 437250 437447 . - 0 ID=cds-WP_001124225.1;Parent=gene-CCO34_RS02300;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=CCO34_RS02300;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 437543 438085 . - . ID=gene-CCO34_RS02305;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CCO34_RS02305;old_locus_tag=CCO34_02305 NZ_NPMD01000001.1 Protein Homology CDS 437543 438085 . - 0 ID=cds-WP_001574431.1;Parent=gene-CCO34_RS02305;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=CCO34_RS02305;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 438089 440017 . - . ID=gene-CCO34_RS02310;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CCO34_RS02310;old_locus_tag=CCO34_02310 NZ_NPMD01000001.1 Protein Homology CDS 438089 440017 . - 0 ID=cds-WP_001144215.1;Parent=gene-CCO34_RS02310;Dbxref=GenBank:WP_001144215.1;Name=WP_001144215.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=CCO34_RS02310;product=threonine--tRNA ligase;protein_id=WP_001144215.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 440277 441131 . - . ID=gene-CCO34_RS02320;Name=CCO34_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02320;old_locus_tag=CCO34_02320 NZ_NPMD01000001.1 Protein Homology CDS 440277 441131 . - 0 ID=cds-WP_080181037.1;Parent=gene-CCO34_RS02320;Dbxref=GenBank:WP_080181037.1;Name=WP_080181037.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=CCO34_RS02320;product=DNA/RNA non-specific endonuclease;protein_id=WP_080181037.1;transl_table=11 NZ_NPMD01000001.1 RefSeq pseudogene 441152 441442 . - . ID=gene-CCO34_RS02325;Name=CCO34_RS02325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS02325;old_locus_tag=CCO34_02325;pseudo=true NZ_NPMD01000001.1 Protein Homology CDS 441152 441442 . - 0 ID=cds-CCO34_RS02325;Parent=gene-CCO34_RS02325;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=CCO34_RS02325;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 441585 442544 . + . ID=gene-CCO34_RS02330;Name=CCO34_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02330;old_locus_tag=CCO34_02330 NZ_NPMD01000001.1 Protein Homology CDS 441585 442544 . + 0 ID=cds-WP_001046438.1;Parent=gene-CCO34_RS02330;Dbxref=GenBank:WP_001046438.1;Name=WP_001046438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=CCO34_RS02330;product=lipid A deacylase LpxR family protein;protein_id=WP_001046438.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 442593 443351 . - . ID=gene-CCO34_RS02335;Name=CCO34_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02335;old_locus_tag=CCO34_02335 NZ_NPMD01000001.1 Protein Homology CDS 442593 443351 . - 0 ID=cds-WP_000770981.1;Parent=gene-CCO34_RS02335;Dbxref=GenBank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=CCO34_RS02335;product=DUF481 domain-containing protein;protein_id=WP_000770981.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 443640 444572 . + . ID=gene-CCO34_RS02340;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO34_RS02340;old_locus_tag=CCO34_02340 NZ_NPMD01000001.1 Protein Homology CDS 443640 444572 . + 0 ID=cds-WP_000251711.1;Parent=gene-CCO34_RS02340;Dbxref=GenBank:WP_000251711.1;Name=WP_000251711.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=CCO34_RS02340;product=6-phosphofructokinase II;protein_id=WP_000251711.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 444669 444959 . + . ID=gene-CCO34_RS02345;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=CCO34_RS02345;old_locus_tag=CCO34_02345 NZ_NPMD01000001.1 Protein Homology CDS 444669 444959 . + 0 ID=cds-WP_000146133.1;Parent=gene-CCO34_RS02345;Dbxref=GenBank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=CCO34_RS02345;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 445066 445926 . + . ID=gene-CCO34_RS02350;Name=CCO34_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02350;old_locus_tag=CCO34_02350 NZ_NPMD01000001.1 Protein Homology CDS 445066 445926 . + 0 ID=cds-WP_000267686.1;Parent=gene-CCO34_RS02350;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=CCO34_RS02350;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 445969 446505 . - . ID=gene-CCO34_RS02355;Name=CCO34_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02355;old_locus_tag=CCO34_02355 NZ_NPMD01000001.1 Protein Homology CDS 445969 446505 . - 0 ID=cds-WP_000222158.1;Parent=gene-CCO34_RS02355;Dbxref=GenBank:WP_000222158.1;Name=WP_000222158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=CCO34_RS02355;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 446654 447322 . + . ID=gene-CCO34_RS02360;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=CCO34_RS02360;old_locus_tag=CCO34_02360 NZ_NPMD01000001.1 Protein Homology CDS 446654 447322 . + 0 ID=cds-WP_000106856.1;Parent=gene-CCO34_RS02360;Dbxref=GenBank:WP_000106856.1;Name=WP_000106856.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=CCO34_RS02360;product=hexitol phosphatase HxpB;protein_id=WP_000106856.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 447460 448059 . + . ID=gene-CCO34_RS02365;Name=CCO34_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02365;old_locus_tag=CCO34_02365 NZ_NPMD01000001.1 Protein Homology CDS 447460 448059 . + 0 ID=cds-WP_000505804.1;Parent=gene-CCO34_RS02365;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=CCO34_RS02365;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 448196 449587 . + . ID=gene-CCO34_RS02370;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=CCO34_RS02370;old_locus_tag=CCO34_02370 NZ_NPMD01000001.1 Protein Homology CDS 448196 449587 . + 0 ID=cds-WP_001010662.1;Parent=gene-CCO34_RS02370;Dbxref=GenBank:WP_001010662.1;Name=WP_001010662.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=CCO34_RS02370;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010662.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 449690 449932 . - . ID=gene-CCO34_RS02375;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=CCO34_RS02375;old_locus_tag=CCO34_02375 NZ_NPMD01000001.1 Protein Homology CDS 449690 449932 . - 0 ID=cds-WP_000977510.1;Parent=gene-CCO34_RS02375;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=CCO34_RS02375;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 450297 452549 . + . ID=gene-CCO34_RS02385;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=CCO34_RS02385;old_locus_tag=CCO34_02385 NZ_NPMD01000001.1 Protein Homology CDS 450297 452549 . + 0 ID=cds-WP_000019102.1;Parent=gene-CCO34_RS02385;Dbxref=GenBank:WP_000019102.1;Name=WP_000019102.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=CCO34_RS02385;product=catalase HPII;protein_id=WP_000019102.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 452593 453351 . - . ID=gene-CCO34_RS02390;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=CCO34_RS02390;old_locus_tag=CCO34_02390 NZ_NPMD01000001.1 Protein Homology CDS 452593 453351 . - 0 ID=cds-WP_000442729.1;Parent=gene-CCO34_RS02390;Dbxref=GenBank:WP_000442729.1;Name=WP_000442729.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=CCO34_RS02390;product=chitin disaccharide deacetylase;protein_id=WP_000442729.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 453364 454719 . - . ID=gene-CCO34_RS02395;Name=CCO34_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02395;old_locus_tag=CCO34_02395 NZ_NPMD01000001.1 Protein Homology CDS 453364 454719 . - 0 ID=cds-WP_000078778.1;Parent=gene-CCO34_RS02395;Dbxref=GenBank:WP_000078778.1;Name=WP_000078778.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=CCO34_RS02395;product=6-phospho-beta-glucosidase;protein_id=WP_000078778.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 454844 455686 . - . ID=gene-CCO34_RS02400;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=CCO34_RS02400;old_locus_tag=CCO34_02400 NZ_NPMD01000001.1 Protein Homology CDS 454844 455686 . - 0 ID=cds-WP_000983393.1;Parent=gene-CCO34_RS02400;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=CCO34_RS02400;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 455697 456044 . - . ID=gene-CCO34_RS02405;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=CCO34_RS02405;old_locus_tag=CCO34_02405 NZ_NPMD01000001.1 Protein Homology CDS 455697 456044 . - 0 ID=cds-WP_000459883.1;Parent=gene-CCO34_RS02405;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=CCO34_RS02405;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 456095 457453 . - . ID=gene-CCO34_RS02410;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=CCO34_RS02410;old_locus_tag=CCO34_02410 NZ_NPMD01000001.1 Protein Homology CDS 456095 457453 . - 0 ID=cds-WP_000073067.1;Parent=gene-CCO34_RS02410;Dbxref=GenBank:WP_000073067.1;Name=WP_000073067.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=CCO34_RS02410;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073067.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 457536 457856 . - . ID=gene-CCO34_RS02415;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=CCO34_RS02415;old_locus_tag=CCO34_02415 NZ_NPMD01000001.1 Protein Homology CDS 457536 457856 . - 0 ID=cds-WP_000412161.1;Parent=gene-CCO34_RS02415;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=CCO34_RS02415;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 458157 458498 . - . ID=gene-CCO34_RS02425;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=CCO34_RS02425;old_locus_tag=CCO34_02425 NZ_NPMD01000001.1 Protein Homology CDS 458157 458498 . - 0 ID=cds-WP_001039301.1;Parent=gene-CCO34_RS02425;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=CCO34_RS02425;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 458717 459544 . + . ID=gene-CCO34_RS02430;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CCO34_RS02430;old_locus_tag=CCO34_02430 NZ_NPMD01000001.1 Protein Homology CDS 458717 459544 . + 0 ID=cds-WP_000174982.1;Parent=gene-CCO34_RS02430;Dbxref=GenBank:WP_000174982.1;Name=WP_000174982.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=CCO34_RS02430;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174982.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 459665 460546 . + . ID=gene-CCO34_RS02435;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=CCO34_RS02435;old_locus_tag=CCO34_02435 NZ_NPMD01000001.1 Protein Homology CDS 459665 460546 . + 0 ID=cds-WP_001518228.1;Parent=gene-CCO34_RS02435;Dbxref=GenBank:WP_001518228.1;Name=WP_001518228.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=CCO34_RS02435;product=excinuclease Cho;protein_id=WP_001518228.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 460621 461106 . - . ID=gene-CCO34_RS02440;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=CCO34_RS02440;old_locus_tag=CCO34_02440 NZ_NPMD01000001.1 Protein Homology CDS 460621 461106 . - 0 ID=cds-WP_001229001.1;Parent=gene-CCO34_RS02440;Dbxref=GenBank:WP_001229001.1;Name=WP_001229001.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=CCO34_RS02440;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001229001.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 461442 462410 . - . ID=gene-CCO34_RS02450;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=CCO34_RS02450;old_locus_tag=CCO34_02450 NZ_NPMD01000001.1 Protein Homology CDS 461442 462410 . - 0 ID=cds-WP_000368439.1;Parent=gene-CCO34_RS02450;Dbxref=GenBank:WP_000368439.1;Name=WP_000368439.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=CCO34_RS02450;product=succinylglutamate desuccinylase;protein_id=WP_000368439.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 462403 463746 . - . ID=gene-CCO34_RS02455;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=CCO34_RS02455;old_locus_tag=CCO34_02455 NZ_NPMD01000001.1 Protein Homology CDS 462403 463746 . - 0 ID=cds-WP_000123932.1;Parent=gene-CCO34_RS02455;Dbxref=GenBank:WP_000123932.1;Name=WP_000123932.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=CCO34_RS02455;product=N-succinylarginine dihydrolase;protein_id=WP_000123932.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 463743 465221 . - . ID=gene-CCO34_RS02460;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=CCO34_RS02460;old_locus_tag=CCO34_02460 NZ_NPMD01000001.1 Protein Homology CDS 463743 465221 . - 0 ID=cds-WP_000177260.1;Parent=gene-CCO34_RS02460;Dbxref=GenBank:WP_000177260.1;Name=WP_000177260.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=CCO34_RS02460;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177260.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 465218 466252 . - . ID=gene-CCO34_RS02465;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=CCO34_RS02465;old_locus_tag=CCO34_02465 NZ_NPMD01000001.1 Protein Homology CDS 465218 466252 . - 0 ID=cds-WP_001263889.1;Parent=gene-CCO34_RS02465;Dbxref=GenBank:WP_001263889.1;Name=WP_001263889.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=CCO34_RS02465;product=arginine N-succinyltransferase;protein_id=WP_001263889.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 466243 467469 . - . ID=gene-CCO34_RS02470;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=CCO34_RS02470;old_locus_tag=CCO34_02470 NZ_NPMD01000001.1 Protein Homology CDS 466243 467469 . - 0 ID=cds-WP_000059496.1;Parent=gene-CCO34_RS02470;Dbxref=GenBank:WP_000059496.1;Name=WP_000059496.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=CCO34_RS02470;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000059496.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 467915 468721 . + . ID=gene-CCO34_RS02480;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=CCO34_RS02480;old_locus_tag=CCO34_02480 NZ_NPMD01000001.1 Protein Homology CDS 467915 468721 . + 0 ID=cds-WP_000673954.1;Parent=gene-CCO34_RS02480;Dbxref=GenBank:WP_000673954.1;Name=WP_000673954.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=CCO34_RS02480;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 468794 469210 . + . ID=gene-CCO34_RS02485;Name=CCO34_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02485;old_locus_tag=CCO34_02485 NZ_NPMD01000001.1 Protein Homology CDS 468794 469210 . + 0 ID=cds-WP_000592146.1;Parent=gene-CCO34_RS02485;Dbxref=GenBank:WP_000592146.1;Name=WP_000592146.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=CCO34_RS02485;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592146.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 469170 469445 . - . ID=gene-CCO34_RS02490;Name=CCO34_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02490;old_locus_tag=CCO34_02490 NZ_NPMD01000001.1 Protein Homology CDS 469170 469445 . - 0 ID=cds-WP_001254682.1;Parent=gene-CCO34_RS02490;Dbxref=GenBank:WP_001254682.1;Name=WP_001254682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=CCO34_RS02490;product=YnjH family protein;protein_id=WP_001254682.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 469684 471027 . + . ID=gene-CCO34_RS02495;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=CCO34_RS02495;old_locus_tag=CCO34_02495 NZ_NPMD01000001.1 Protein Homology CDS 469684 471027 . + 0 ID=cds-WP_000372865.1;Parent=gene-CCO34_RS02495;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=CCO34_RS02495;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 471057 473006 . - . ID=gene-CCO34_RS02500;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=CCO34_RS02500;old_locus_tag=CCO34_02500 NZ_NPMD01000001.1 Protein Homology CDS 471057 473006 . - 0 ID=cds-WP_001235874.1;Parent=gene-CCO34_RS02500;Dbxref=GenBank:WP_001235874.1;Name=WP_001235874.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=CCO34_RS02500;product=DNA topoisomerase III;protein_id=WP_001235874.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 473011 474054 . - . ID=gene-CCO34_RS02505;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=CCO34_RS02505;old_locus_tag=CCO34_02505 NZ_NPMD01000001.1 Protein Homology CDS 473011 474054 . - 0 ID=cds-WP_001294903.1;Parent=gene-CCO34_RS02505;Dbxref=GenBank:WP_001294903.1;Name=WP_001294903.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=CCO34_RS02505;product=selenide%2C water dikinase SelD;protein_id=WP_001294903.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 474172 474723 . - . ID=gene-CCO34_RS02515;Name=CCO34_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02515;old_locus_tag=CCO34_02515 NZ_NPMD01000001.1 Protein Homology CDS 474172 474723 . - 0 ID=cds-WP_000339313.1;Parent=gene-CCO34_RS02515;Dbxref=GenBank:WP_000339313.1;Name=WP_000339313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=CCO34_RS02515;product=NAD(P)H nitroreductase;protein_id=WP_000339313.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 474897 476753 . + . ID=gene-CCO34_RS02525;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CCO34_RS02525;old_locus_tag=CCO34_02525 NZ_NPMD01000001.1 Protein Homology CDS 474897 476753 . + 0 ID=cds-WP_001259871.1;Parent=gene-CCO34_RS02525;Dbxref=GenBank:WP_001259871.1;Name=WP_001259871.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=CCO34_RS02525;product=signal peptide peptidase SppA;protein_id=WP_001259871.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 476849 477865 . + . ID=gene-CCO34_RS02530;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=CCO34_RS02530;old_locus_tag=CCO34_02530 NZ_NPMD01000001.1 Protein Homology CDS 476849 477865 . + 0 ID=cds-WP_001170134.1;Parent=gene-CCO34_RS02530;Dbxref=GenBank:WP_001170134.1;Name=WP_001170134.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=CCO34_RS02530;product=asparaginase;protein_id=WP_001170134.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 477892 478548 . + . ID=gene-CCO34_RS02535;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=CCO34_RS02535;old_locus_tag=CCO34_02535 NZ_NPMD01000001.1 Protein Homology CDS 477892 478548 . + 0 ID=cds-WP_000184707.1;Parent=gene-CCO34_RS02535;Dbxref=GenBank:WP_000184707.1;Name=WP_000184707.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=CCO34_RS02535;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184707.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 478651 480009 . - . ID=gene-CCO34_RS02540;Name=CCO34_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02540;old_locus_tag=CCO34_02540 NZ_NPMD01000001.1 Protein Homology CDS 478651 480009 . - 0 ID=cds-WP_000389927.1;Parent=gene-CCO34_RS02540;Dbxref=GenBank:WP_000389927.1;Name=WP_000389927.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389924.1;locus_tag=CCO34_RS02540;product=MFS transporter;protein_id=WP_000389927.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 480145 480903 . - . ID=gene-CCO34_RS02545;Name=CCO34_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02545;old_locus_tag=CCO34_02545 NZ_NPMD01000001.1 Protein Homology CDS 480145 480903 . - 0 ID=cds-WP_000719104.1;Parent=gene-CCO34_RS02545;Dbxref=GenBank:WP_000719104.1;Name=WP_000719104.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=CCO34_RS02545;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000719104.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 481033 482016 . - . ID=gene-CCO34_RS02550;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=CCO34_RS02550;old_locus_tag=CCO34_02550 NZ_NPMD01000001.1 Protein Homology CDS 481033 482016 . - 0 ID=cds-WP_000782142.1;Parent=gene-CCO34_RS02550;Dbxref=GenBank:WP_000782142.1;Name=WP_000782142.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=CCO34_RS02550;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000782142.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 482026 482973 . - . ID=gene-CCO34_RS02555;Name=CCO34_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02555;old_locus_tag=CCO34_02555 NZ_NPMD01000001.1 Protein Homology CDS 482026 482973 . - 0 ID=cds-WP_000343332.1;Parent=gene-CCO34_RS02555;Dbxref=GenBank:WP_000343332.1;Name=WP_000343332.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=CCO34_RS02555;product=sugar kinase;protein_id=WP_000343332.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 482978 483814 . - . ID=gene-CCO34_RS02560;Name=CCO34_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02560;old_locus_tag=CCO34_02560 NZ_NPMD01000001.1 Protein Homology CDS 482978 483814 . - 0 ID=cds-WP_000878865.1;Parent=gene-CCO34_RS02560;Dbxref=GenBank:WP_000878865.1;Name=WP_000878865.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=CCO34_RS02560;product=ketose-bisphosphate aldolase;protein_id=WP_000878865.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 483836 484879 . - . ID=gene-CCO34_RS02565;Name=CCO34_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02565;old_locus_tag=CCO34_02565 NZ_NPMD01000001.1 Protein Homology CDS 483836 484879 . - 0 ID=cds-WP_000798078.1;Parent=gene-CCO34_RS02565;Dbxref=GenBank:WP_000798078.1;Name=WP_000798078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=CCO34_RS02565;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_000798078.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 484890 486269 . - . ID=gene-CCO34_RS02570;Name=CCO34_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02570;old_locus_tag=CCO34_02570 NZ_NPMD01000001.1 Protein Homology CDS 484890 486269 . - 0 ID=cds-WP_000435325.1;Parent=gene-CCO34_RS02570;Dbxref=GenBank:WP_000435325.1;Name=WP_000435325.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=CCO34_RS02570;product=MFS transporter;protein_id=WP_000435325.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 486296 487372 . - . ID=gene-CCO34_RS02575;Name=CCO34_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02575;old_locus_tag=CCO34_02575 NZ_NPMD01000001.1 Protein Homology CDS 486296 487372 . - 0 ID=cds-WP_000645183.1;Parent=gene-CCO34_RS02575;Dbxref=GenBank:WP_000645183.1;Name=WP_000645183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=CCO34_RS02575;product=zinc-binding dehydrogenase;protein_id=WP_000645183.1;transl_table=11 NZ_NPMD01000001.1 RefSeq pseudogene 487665 488164 . + . ID=gene-CCO34_RS25745;Name=CCO34_RS25745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25745;partial=true;pseudo=true;start_range=.,487665 NZ_NPMD01000001.1 Protein Homology CDS 487665 488164 . + 0 ID=cds-CCO34_RS25745;Parent=gene-CCO34_RS25745;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228952.1;locus_tag=CCO34_RS25745;partial=true;product=glycosyl hydrolase family 18 protein;pseudo=true;start_range=.,487665;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 488274 488552 . - . ID=gene-CCO34_RS02580;Name=CCO34_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02580;old_locus_tag=CCO34_02580 NZ_NPMD01000001.1 Protein Homology CDS 488274 488552 . - 0 ID=cds-WP_001046865.1;Parent=gene-CCO34_RS02580;Dbxref=GenBank:WP_001046865.1;Name=WP_001046865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=CCO34_RS02580;product=YeaC family protein;protein_id=WP_001046865.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 488594 489007 . - . ID=gene-CCO34_RS02585;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CCO34_RS02585;old_locus_tag=CCO34_02585 NZ_NPMD01000001.1 Protein Homology CDS 488594 489007 . - 0 ID=cds-WP_001519539.1;Parent=gene-CCO34_RS02585;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=CCO34_RS02585;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 489349 490344 . + . ID=gene-CCO34_RS02590;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=CCO34_RS02590;old_locus_tag=CCO34_02590 NZ_NPMD01000001.1 Protein Homology CDS 489349 490344 . + 0 ID=cds-WP_000153505.1;Parent=gene-CCO34_RS02590;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=CCO34_RS02590;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 490678 491562 . + . ID=gene-CCO34_RS02600;Name=CCO34_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02600;old_locus_tag=CCO34_02600 NZ_NPMD01000001.1 Protein Homology CDS 490678 491562 . + 0 ID=cds-WP_000608652.1;Parent=gene-CCO34_RS02600;Dbxref=GenBank:WP_000608652.1;Name=WP_000608652.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=CCO34_RS02600;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000608652.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 491661 492518 . - . ID=gene-CCO34_RS02605;Name=CCO34_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02605;old_locus_tag=CCO34_02605 NZ_NPMD01000001.1 Protein Homology CDS 491661 492518 . - 0 ID=cds-WP_000843751.1;Parent=gene-CCO34_RS02605;Dbxref=GenBank:WP_000843751.1;Name=WP_000843751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=CCO34_RS02605;product=aldo/keto reductase;protein_id=WP_000843751.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 492616 493812 . - . ID=gene-CCO34_RS02610;Name=CCO34_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02610;old_locus_tag=CCO34_02610 NZ_NPMD01000001.1 Protein Homology CDS 492616 493812 . - 0 ID=cds-WP_000029233.1;Parent=gene-CCO34_RS02610;Dbxref=GenBank:WP_000029233.1;Name=WP_000029233.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=CCO34_RS02610;product=anaerobic sulfatase maturase;protein_id=WP_000029233.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 494102 494848 . - . ID=gene-CCO34_RS02615;Name=CCO34_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02615;old_locus_tag=CCO34_02615 NZ_NPMD01000001.1 Protein Homology CDS 494102 494848 . - 0 ID=cds-WP_000163762.1;Parent=gene-CCO34_RS02615;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=CCO34_RS02615;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 495275 497209 . + . ID=gene-CCO34_RS02620;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=CCO34_RS02620;old_locus_tag=CCO34_02620 NZ_NPMD01000001.1 Protein Homology CDS 495275 497209 . + 0 ID=cds-WP_001518010.1;Parent=gene-CCO34_RS02620;Dbxref=GenBank:WP_001518010.1;Name=WP_001518010.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=CCO34_RS02620;product=protein kinase YeaG;protein_id=WP_001518010.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 497332 498618 . + . ID=gene-CCO34_RS02625;Name=CCO34_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02625;old_locus_tag=CCO34_02625 NZ_NPMD01000001.1 Protein Homology CDS 497332 498618 . + 0 ID=cds-WP_000219714.1;Parent=gene-CCO34_RS02625;Dbxref=GenBank:WP_000219714.1;Name=WP_000219714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=CCO34_RS02625;product=YeaH/YhbH family protein;protein_id=WP_000219714.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 498768 498965 . - . ID=gene-CCO34_RS25520;Name=CCO34_RS25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25520 NZ_NPMD01000001.1 GeneMarkS-2+ CDS 498768 498965 . - 0 ID=cds-WP_012218875.1;Parent=gene-CCO34_RS25520;Dbxref=GenBank:WP_012218875.1;Name=WP_012218875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25520;product=hypothetical protein;protein_id=WP_012218875.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 499259 500752 . + . ID=gene-CCO34_RS02630;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=CCO34_RS02630;old_locus_tag=CCO34_02630 NZ_NPMD01000001.1 Protein Homology CDS 499259 500752 . + 0 ID=cds-WP_001048646.1;Parent=gene-CCO34_RS02630;Dbxref=GenBank:WP_001048646.1;Name=WP_001048646.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=CCO34_RS02630;product=diguanylate cyclase DgcJ;protein_id=WP_001048646.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 500802 501320 . + . ID=gene-CCO34_RS02635;Name=CCO34_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02635;old_locus_tag=CCO34_02635 NZ_NPMD01000001.1 Protein Homology CDS 500802 501320 . + 0 ID=cds-WP_162264798.1;Parent=gene-CCO34_RS02635;Dbxref=GenBank:WP_162264798.1;Name=WP_162264798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=CCO34_RS02635;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_162264798.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 501317 501418 . - . ID=gene-CCO34_RS02640;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=CCO34_RS02640;old_locus_tag=CCO34_02640 NZ_NPMD01000001.1 Protein Homology CDS 501317 501418 . - 0 ID=cds-WP_000272233.1;Parent=gene-CCO34_RS02640;Dbxref=GenBank:WP_000272233.1;Name=WP_000272233.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272238.1;locus_tag=CCO34_RS02640;product=small membrane protein YoaI;protein_id=WP_000272233.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 501624 502070 . + . ID=gene-CCO34_RS02645;Name=CCO34_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02645;old_locus_tag=CCO34_02645 NZ_NPMD01000001.1 Protein Homology CDS 501624 502070 . + 0 ID=cds-WP_000460698.1;Parent=gene-CCO34_RS02645;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=CCO34_RS02645;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 502050 502844 . - . ID=gene-CCO34_RS02650;Name=CCO34_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02650;old_locus_tag=CCO34_02650 NZ_NPMD01000001.1 Protein Homology CDS 502050 502844 . - 0 ID=cds-WP_000579798.1;Parent=gene-CCO34_RS02650;Dbxref=GenBank:WP_000579798.1;Name=WP_000579798.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=CCO34_RS02650;product=AraC family transcriptional regulator;protein_id=WP_000579798.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 502945 504129 . + . ID=gene-CCO34_RS02655;Name=CCO34_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02655;old_locus_tag=CCO34_02655 NZ_NPMD01000001.1 Protein Homology CDS 502945 504129 . + 0 ID=cds-WP_000205350.1;Parent=gene-CCO34_RS02655;Dbxref=GenBank:WP_000205350.1;Name=WP_000205350.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=CCO34_RS02655;product=CynX/NimT family MFS transporter;protein_id=WP_000205350.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 504248 504595 . + . ID=gene-CCO34_RS02660;Name=CCO34_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02660;old_locus_tag=CCO34_02660 NZ_NPMD01000001.1 Protein Homology CDS 504248 504595 . + 0 ID=cds-WP_001222527.1;Parent=gene-CCO34_RS02660;Dbxref=GenBank:WP_001222527.1;Name=WP_001222527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=CCO34_RS02660;product=DUF488 domain-containing protein;protein_id=WP_001222527.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 504581 504892 . - . ID=gene-CCO34_RS02665;Name=CCO34_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02665;old_locus_tag=CCO34_02665 NZ_NPMD01000001.1 Protein Homology CDS 504581 504892 . - 0 ID=cds-WP_000487129.1;Parent=gene-CCO34_RS02665;Dbxref=GenBank:WP_000487129.1;Name=WP_000487129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=CCO34_RS02665;product=hypothetical protein;protein_id=WP_000487129.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 504961 505212 . - . ID=gene-CCO34_RS02670;Name=CCO34_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02670;old_locus_tag=CCO34_02670 NZ_NPMD01000001.1 Protein Homology CDS 504961 505212 . - 0 ID=cds-WP_000673492.1;Parent=gene-CCO34_RS02670;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=CCO34_RS02670;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 505408 505506 . + . ID=gene-CCO34_RS02675;Name=CCO34_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02675;old_locus_tag=CCO34_02675 NZ_NPMD01000001.1 Protein Homology CDS 505408 505506 . + 0 ID=cds-WP_001589065.1;Parent=gene-CCO34_RS02675;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=CCO34_RS02675;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 505645 505893 . - . ID=gene-CCO34_RS02680;Name=CCO34_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02680;old_locus_tag=CCO34_02680 NZ_NPMD01000001.1 Protein Homology CDS 505645 505893 . - 0 ID=cds-WP_000512149.1;Parent=gene-CCO34_RS02680;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=CCO34_RS02680;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 506207 506848 . - . ID=gene-CCO34_RS02690;Name=CCO34_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02690;old_locus_tag=CCO34_02690 NZ_NPMD01000001.1 Protein Homology CDS 506207 506848 . - 0 ID=cds-WP_094965393.1;Parent=gene-CCO34_RS02690;Dbxref=GenBank:WP_094965393.1;Name=WP_094965393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=CCO34_RS02690;product=hypothetical protein;protein_id=WP_094965393.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 507078 507260 . - . ID=gene-CCO34_RS02695;Name=CCO34_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02695;old_locus_tag=CCO34_02695 NZ_NPMD01000001.1 Protein Homology CDS 507078 507260 . - 0 ID=cds-WP_000513733.1;Parent=gene-CCO34_RS02695;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=CCO34_RS02695;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 507263 507625 . - . ID=gene-CCO34_RS02700;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=CCO34_RS02700;old_locus_tag=CCO34_02700 NZ_NPMD01000001.1 Protein Homology CDS 507263 507625 . - 0 ID=cds-WP_001248993.1;Parent=gene-CCO34_RS02700;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=CCO34_RS02700;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 507798 508436 . - . ID=gene-CCO34_RS02710;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=CCO34_RS02710;old_locus_tag=CCO34_02710 NZ_NPMD01000001.1 Protein Homology CDS 507798 508436 . - 0 ID=cds-WP_000457190.1;Parent=gene-CCO34_RS02710;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=CCO34_RS02710;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 508633 509178 . - . ID=gene-CCO34_RS02715;Name=CCO34_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02715;old_locus_tag=CCO34_02715 NZ_NPMD01000001.1 Protein Homology CDS 508633 509178 . - 0 ID=cds-WP_000617990.1;Parent=gene-CCO34_RS02715;Dbxref=GenBank:WP_000617990.1;Name=WP_000617990.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=CCO34_RS02715;product=chorismate mutase;protein_id=WP_000617990.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 509261 509416 . + . ID=gene-CCO34_RS02720;Name=CCO34_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02720;old_locus_tag=CCO34_02720 NZ_NPMD01000001.1 Protein Homology CDS 509261 509416 . + 0 ID=cds-WP_000908466.1;Parent=gene-CCO34_RS02720;Dbxref=GenBank:WP_000908466.1;Name=WP_000908466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=CCO34_RS02720;product=hypothetical protein;protein_id=WP_000908466.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 509495 509743 . + . ID=gene-CCO34_RS02725;Name=CCO34_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02725;old_locus_tag=CCO34_02725 NZ_NPMD01000001.1 Protein Homology CDS 509495 509743 . + 0 ID=cds-WP_000208086.1;Parent=gene-CCO34_RS02725;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=CCO34_RS02725;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 509998 510846 . - . ID=gene-CCO34_RS02735;Name=CCO34_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02735;old_locus_tag=CCO34_02735 NZ_NPMD01000001.1 Protein Homology CDS 509998 510846 . - 0 ID=cds-WP_000190263.1;Parent=gene-CCO34_RS02735;Dbxref=GenBank:WP_000190263.1;Name=WP_000190263.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=CCO34_RS02735;product=MerR family transcriptional regulator;protein_id=WP_000190263.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 510915 511508 . - . ID=gene-CCO34_RS02740;Name=CCO34_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02740;old_locus_tag=CCO34_02740 NZ_NPMD01000001.1 Protein Homology CDS 510915 511508 . - 0 ID=cds-WP_023228788.1;Parent=gene-CCO34_RS02740;Dbxref=GenBank:WP_023228788.1;Name=WP_023228788.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=CCO34_RS02740;product=helix-turn-helix domain-containing protein;protein_id=WP_023228788.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 511653 512441 . - . ID=gene-CCO34_RS02745;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=CCO34_RS02745;old_locus_tag=CCO34_02745 NZ_NPMD01000001.1 Protein Homology CDS 511653 512441 . - 0 ID=cds-WP_000174556.1;Parent=gene-CCO34_RS02745;Dbxref=GenBank:WP_000174556.1;Name=WP_000174556.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=CCO34_RS02745;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_000174556.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 512549 513196 . - . ID=gene-CCO34_RS02750;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=CCO34_RS02750;old_locus_tag=CCO34_02750 NZ_NPMD01000001.1 Protein Homology CDS 512549 513196 . - 0 ID=cds-WP_023237048.1;Parent=gene-CCO34_RS02750;Dbxref=GenBank:WP_023237048.1;Name=WP_023237048.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=CCO34_RS02750;product=metal-binding protein ZinT;protein_id=WP_023237048.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 513308 513384 . - . ID=gene-CCO34_RS02755;Name=CCO34_RS02755;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS02755;old_locus_tag=CCO34_02755 NZ_NPMD01000001.1 tRNAscan-SE tRNA 513308 513384 . - . ID=rna-CCO34_RS02755;Parent=gene-CCO34_RS02755;anticodon=(pos:complement(513348..513350));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS02755;product=tRNA-Arg NZ_NPMD01000001.1 tRNAscan-SE exon 513308 513384 . - . ID=exon-CCO34_RS02755-1;Parent=rna-CCO34_RS02755;anticodon=(pos:complement(513348..513350));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS02755;product=tRNA-Arg NZ_NPMD01000001.1 RefSeq gene 513393 513719 . - . ID=gene-CCO34_RS02760;Name=CCO34_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02760;old_locus_tag=CCO34_02760 NZ_NPMD01000001.1 Protein Homology CDS 513393 513719 . - 0 ID=cds-WP_001183698.1;Parent=gene-CCO34_RS02760;Dbxref=GenBank:WP_001183698.1;Name=WP_001183698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=CCO34_RS02760;product=four-helix bundle copper-binding protein;protein_id=WP_001183698.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 513913 515046 . + . ID=gene-CCO34_RS02765;Name=CCO34_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02765;old_locus_tag=CCO34_02765 NZ_NPMD01000001.1 Protein Homology CDS 513913 515046 . + 0 ID=cds-WP_000456065.1;Parent=gene-CCO34_RS02765;Dbxref=GenBank:WP_000456065.1;Name=WP_000456065.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=CCO34_RS02765;product=mechanosensitive ion channel family protein;protein_id=WP_000456065.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 515128 515718 . - . ID=gene-CCO34_RS02770;Name=CCO34_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02770;old_locus_tag=CCO34_02770 NZ_NPMD01000001.1 Protein Homology CDS 515128 515718 . - 0 ID=cds-WP_000947455.1;Parent=gene-CCO34_RS02770;Dbxref=GenBank:WP_000947455.1;Name=WP_000947455.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=CCO34_RS02770;product=ABC transporter ATP-binding protein;protein_id=WP_000947455.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 515712 516509 . - . ID=gene-CCO34_RS02775;Name=CCO34_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02775;old_locus_tag=CCO34_02775 NZ_NPMD01000001.1 Protein Homology CDS 515712 516509 . - 0 ID=cds-WP_000950209.1;Parent=gene-CCO34_RS02775;Dbxref=GenBank:WP_000950209.1;Name=WP_000950209.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=CCO34_RS02775;product=ATP-binding cassette domain-containing protein;protein_id=WP_000950209.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 516503 517315 . - . ID=gene-CCO34_RS02780;Name=CCO34_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02780;old_locus_tag=CCO34_02780 NZ_NPMD01000001.1 Protein Homology CDS 516503 517315 . - 0 ID=cds-WP_000966644.1;Parent=gene-CCO34_RS02780;Dbxref=GenBank:WP_000966644.1;Name=WP_000966644.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=CCO34_RS02780;product=ABC transporter permease;protein_id=WP_000966644.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 517305 518279 . - . ID=gene-CCO34_RS02785;Name=CCO34_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02785;old_locus_tag=CCO34_02785 NZ_NPMD01000001.1 Protein Homology CDS 517305 518279 . - 0 ID=cds-WP_001520270.1;Parent=gene-CCO34_RS02785;Dbxref=GenBank:WP_001520270.1;Name=WP_001520270.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=CCO34_RS02785;product=ABC transporter permease;protein_id=WP_001520270.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 518279 519913 . - . ID=gene-CCO34_RS02790;Name=CCO34_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02790;old_locus_tag=CCO34_02790 NZ_NPMD01000001.1 Protein Homology CDS 518279 519913 . - 0 ID=cds-WP_000946093.1;Parent=gene-CCO34_RS02790;Dbxref=GenBank:WP_000946093.1;Name=WP_000946093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=CCO34_RS02790;product=ABC transporter substrate-binding protein;protein_id=WP_000946093.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 520595 520909 . + . ID=gene-CCO34_RS02795;Name=CCO34_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02795;old_locus_tag=CCO34_02795 NZ_NPMD01000001.1 Protein Homology CDS 520595 520909 . + 0 ID=cds-WP_000182479.1;Parent=gene-CCO34_RS02795;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=CCO34_RS02795;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 521058 521588 . + . ID=gene-CCO34_RS02800;Name=CCO34_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02800;old_locus_tag=CCO34_02800 NZ_NPMD01000001.1 Protein Homology CDS 521058 521588 . + 0 ID=cds-WP_000929980.1;Parent=gene-CCO34_RS02800;Dbxref=GenBank:WP_000929980.1;Name=WP_000929980.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=CCO34_RS02800;product=cytochrome b;protein_id=WP_000929980.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 521670 522713 . - . ID=gene-CCO34_RS02805;Name=CCO34_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02805;old_locus_tag=CCO34_02805 NZ_NPMD01000001.1 Protein Homology CDS 521670 522713 . - 0 ID=cds-WP_000761745.1;Parent=gene-CCO34_RS02805;Dbxref=GenBank:WP_000761745.1;Name=WP_000761745.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=CCO34_RS02805;product=sialidase family protein;protein_id=WP_000761745.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 523052 523519 . - . ID=gene-CCO34_RS02810;Name=CCO34_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02810;old_locus_tag=CCO34_02810 NZ_NPMD01000001.1 Protein Homology CDS 523052 523519 . - 0 ID=cds-WP_001218120.1;Parent=gene-CCO34_RS02810;Dbxref=GenBank:WP_001218120.1;Name=WP_001218120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=CCO34_RS02810;product=Hsp20 family protein;protein_id=WP_001218120.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 523671 523943 . - . ID=gene-CCO34_RS02815;Name=CCO34_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02815;old_locus_tag=CCO34_02815 NZ_NPMD01000001.1 Protein Homology CDS 523671 523943 . - 0 ID=cds-WP_000927827.1;Parent=gene-CCO34_RS02815;Dbxref=GenBank:WP_000927827.1;Name=WP_000927827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=CCO34_RS02815;product=hypothetical protein;protein_id=WP_000927827.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 524143 524268 . - . ID=gene-CCO34_RS02820;Name=CCO34_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02820;old_locus_tag=CCO34_02820 NZ_NPMD01000001.1 Protein Homology CDS 524143 524268 . - 0 ID=cds-WP_000758947.1;Parent=gene-CCO34_RS02820;Dbxref=GenBank:WP_000758947.1;Name=WP_000758947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748351.1;locus_tag=CCO34_RS02820;product=lipoprotein;protein_id=WP_000758947.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 524646 524990 . + . ID=gene-CCO34_RS02825;Name=CCO34_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02825;old_locus_tag=CCO34_02825 NZ_NPMD01000001.1 Protein Homology CDS 524646 524990 . + 0 ID=cds-WP_000977725.1;Parent=gene-CCO34_RS02825;Dbxref=GenBank:WP_000977725.1;Name=WP_000977725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=CCO34_RS02825;product=c-type lysozyme inhibitor;protein_id=WP_000977725.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 525745 525821 . - . ID=gene-CCO34_RS02830;Name=CCO34_RS02830;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS02830;old_locus_tag=CCO34_02830 NZ_NPMD01000001.1 tRNAscan-SE tRNA 525745 525821 . - . ID=rna-CCO34_RS02830;Parent=gene-CCO34_RS02830;anticodon=(pos:complement(525785..525787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS02830;product=tRNA-Arg NZ_NPMD01000001.1 tRNAscan-SE exon 525745 525821 . - . ID=exon-CCO34_RS02830-1;Parent=rna-CCO34_RS02830;anticodon=(pos:complement(525785..525787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS02830;product=tRNA-Arg NZ_NPMD01000001.1 RefSeq gene 526212 526769 . - . ID=gene-CCO34_RS02835;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=CCO34_RS02835;old_locus_tag=CCO34_02835 NZ_NPMD01000001.1 Protein Homology CDS 526212 526769 . - 0 ID=cds-WP_000789471.1;Parent=gene-CCO34_RS02835;Dbxref=GenBank:WP_000789471.1;Name=WP_000789471.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=CCO34_RS02835;product=virulence membrane protein PagC;protein_id=WP_000789471.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 527581 527844 . + . ID=gene-CCO34_RS02845;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=CCO34_RS02845;old_locus_tag=CCO34_02845 NZ_NPMD01000001.1 Protein Homology CDS 527581 527844 . + 0 ID=cds-WP_001535993.1;Parent=gene-CCO34_RS02845;Dbxref=GenBank:WP_001535993.1;Name=WP_001535993.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=CCO34_RS02845;product=virulence protein PagD;protein_id=WP_001535993.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 527976 528188 . + . ID=gene-CCO34_RS02850;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=CCO34_RS02850;old_locus_tag=CCO34_02850 NZ_NPMD01000001.1 Protein Homology CDS 527976 528188 . + 0 ID=cds-WP_001537306.1;Parent=gene-CCO34_RS02850;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=CCO34_RS02850;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 528604 529125 . + . ID=gene-CCO34_RS02855;Name=CCO34_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02855;old_locus_tag=CCO34_02855 NZ_NPMD01000001.1 Protein Homology CDS 528604 529125 . + 0 ID=cds-WP_001532066.1;Parent=gene-CCO34_RS02855;Dbxref=GenBank:WP_001532066.1;Name=WP_001532066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=CCO34_RS02855;product=RICIN domain-containing protein;protein_id=WP_001532066.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 529316 529555 . + . ID=gene-CCO34_RS02860;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=CCO34_RS02860;old_locus_tag=CCO34_02860 NZ_NPMD01000001.1 Protein Homology CDS 529316 529555 . + 0 ID=cds-WP_000289207.1;Parent=gene-CCO34_RS02860;Dbxref=GenBank:WP_000289207.1;Name=WP_000289207.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=CCO34_RS02860;product=virulence protein MsgA;protein_id=WP_000289207.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 530045 530833 . + . ID=gene-CCO34_RS02865;Name=envF;gbkey=Gene;gene=envF;gene_biotype=protein_coding;locus_tag=CCO34_RS02865;old_locus_tag=CCO34_02865 NZ_NPMD01000001.1 Protein Homology CDS 530045 530833 . + 0 ID=cds-WP_001033398.1;Parent=gene-CCO34_RS02865;Dbxref=GenBank:WP_001033398.1;Name=WP_001033398.1;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=CCO34_RS02865;product=putative envelope lipoprotein EnvF;protein_id=WP_001033398.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 531155 531361 . + . ID=gene-CCO34_RS26080;Name=CCO34_RS26080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26080;old_locus_tag=CCO34_02870 NZ_NPMD01000001.1 Protein Homology CDS 531155 531361 . + 0 ID=cds-WP_000787625.1;Parent=gene-CCO34_RS26080;Dbxref=GenBank:WP_000787625.1;Name=WP_000787625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787631.1;locus_tag=CCO34_RS26080;product=hypothetical protein;protein_id=WP_000787625.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 531819 532943 . - . ID=gene-CCO34_RS02880;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=CCO34_RS02880;old_locus_tag=CCO34_02880 NZ_NPMD01000001.1 Protein Homology CDS 531819 532943 . - 0 ID=cds-WP_000917258.1;Parent=gene-CCO34_RS02880;Dbxref=GenBank:WP_000917258.1;Name=WP_000917258.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=CCO34_RS02880;product=type III secretion system effector SopF;protein_id=WP_000917258.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 533391 534641 . - . ID=gene-CCO34_RS02885;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CCO34_RS02885;old_locus_tag=CCO34_02885 NZ_NPMD01000001.1 Protein Homology CDS 533391 534641 . - 0 ID=cds-WP_000444508.1;Parent=gene-CCO34_RS02885;Dbxref=GenBank:WP_000444508.1;Name=WP_000444508.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=CCO34_RS02885;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444508.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 534813 535478 . + . ID=gene-CCO34_RS02890;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=CCO34_RS02890;old_locus_tag=CCO34_02890 NZ_NPMD01000001.1 Protein Homology CDS 534813 535478 . + 0 ID=cds-WP_001249407.1;Parent=gene-CCO34_RS02890;Dbxref=GenBank:WP_001249407.1;Name=WP_001249407.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=CCO34_RS02890;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249407.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 535475 535804 . + . ID=gene-CCO34_RS02895;Name=CCO34_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02895;old_locus_tag=CCO34_02895 NZ_NPMD01000001.1 Protein Homology CDS 535475 535804 . + 0 ID=cds-WP_000825957.1;Parent=gene-CCO34_RS02895;Dbxref=GenBank:WP_000825957.1;Name=WP_000825957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=CCO34_RS02895;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825957.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 535816 536277 . + . ID=gene-CCO34_RS02900;Name=CCO34_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02900;old_locus_tag=CCO34_02900 NZ_NPMD01000001.1 Protein Homology CDS 535816 536277 . + 0 ID=cds-WP_000476070.1;Parent=gene-CCO34_RS02900;Dbxref=GenBank:WP_000476070.1;Name=WP_000476070.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=CCO34_RS02900;product=NUDIX hydrolase;protein_id=WP_000476070.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 536331 537437 . + . ID=gene-CCO34_RS02905;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=CCO34_RS02905;old_locus_tag=CCO34_02905 NZ_NPMD01000001.1 Protein Homology CDS 536331 537437 . + 0 ID=cds-WP_000004541.1;Parent=gene-CCO34_RS02905;Dbxref=GenBank:WP_000004541.1;Name=WP_000004541.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=CCO34_RS02905;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_000004541.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 537524 538165 . + . ID=gene-CCO34_RS02910;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=CCO34_RS02910;old_locus_tag=CCO34_02910 NZ_NPMD01000001.1 Protein Homology CDS 537524 538165 . + 0 ID=cds-WP_001519653.1;Parent=gene-CCO34_RS02910;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=CCO34_RS02910;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 538169 539539 . + . ID=gene-CCO34_RS02915;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CCO34_RS02915;old_locus_tag=CCO34_02915 NZ_NPMD01000001.1 Protein Homology CDS 538169 539539 . + 0 ID=cds-WP_000423763.1;Parent=gene-CCO34_RS02915;Dbxref=GenBank:WP_000423763.1;Name=WP_000423763.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=CCO34_RS02915;product=adenylosuccinate lyase;protein_id=WP_000423763.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 539666 540337 . + . ID=gene-CCO34_RS02920;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=CCO34_RS02920;old_locus_tag=CCO34_02920 NZ_NPMD01000001.1 Protein Homology CDS 539666 540337 . + 0 ID=cds-WP_001537766.1;Parent=gene-CCO34_RS02920;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=CCO34_RS02920;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 540337 541800 . + . ID=gene-CCO34_RS02925;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=CCO34_RS02925;old_locus_tag=CCO34_02925 NZ_NPMD01000001.1 Protein Homology CDS 540337 541800 . + 0 ID=cds-WP_001031687.1;Parent=gene-CCO34_RS02925;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=CCO34_RS02925;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 541881 543002 . + . ID=gene-CCO34_RS02930;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=CCO34_RS02930;old_locus_tag=CCO34_02930 NZ_NPMD01000001.1 Protein Homology CDS 541881 543002 . + 0 ID=cds-WP_000456527.1;Parent=gene-CCO34_RS02930;Dbxref=GenBank:WP_000456527.1;Name=WP_000456527.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=CCO34_RS02930;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_000456527.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 543042 544376 . - . ID=gene-CCO34_RS02935;Name=CCO34_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS02935;old_locus_tag=CCO34_02935 NZ_NPMD01000001.1 Protein Homology CDS 543042 544376 . - 0 ID=cds-WP_000944535.1;Parent=gene-CCO34_RS02935;Dbxref=GenBank:WP_000944535.1;Name=WP_000944535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=CCO34_RS02935;product=hypothetical protein;protein_id=WP_000944535.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 544380 545609 . - . ID=gene-CCO34_RS02940;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CCO34_RS02940;old_locus_tag=CCO34_02940 NZ_NPMD01000001.1 Protein Homology CDS 544380 545609 . - 0 ID=cds-WP_000359414.1;Parent=gene-CCO34_RS02940;Dbxref=GenBank:WP_000359414.1;Name=WP_000359414.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=CCO34_RS02940;product=peptidase T;protein_id=WP_000359414.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 545860 546996 . + . ID=gene-CCO34_RS02950;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=CCO34_RS02950;old_locus_tag=CCO34_02950 NZ_NPMD01000001.1 Protein Homology CDS 545860 546996 . + 0 ID=cds-WP_000531607.1;Parent=gene-CCO34_RS02950;Dbxref=GenBank:WP_000531607.1;Name=WP_000531607.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=CCO34_RS02950;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531607.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 546980 547843 . + . ID=gene-CCO34_RS02955;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=CCO34_RS02955;old_locus_tag=CCO34_02955 NZ_NPMD01000001.1 Protein Homology CDS 546980 547843 . + 0 ID=cds-WP_000799391.1;Parent=gene-CCO34_RS02955;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=CCO34_RS02955;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 548172 549182 . + . ID=gene-CCO34_RS02960;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=CCO34_RS02960;old_locus_tag=CCO34_02960 NZ_NPMD01000001.1 Protein Homology CDS 548172 549182 . + 0 ID=cds-WP_001533329.1;Parent=gene-CCO34_RS02960;Dbxref=GenBank:WP_001533329.1;Name=WP_001533329.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=CCO34_RS02960;product=SPI-2 type III secretion system effector SifA;protein_id=WP_001533329.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 549498 550277 . + . ID=gene-CCO34_RS02965;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=CCO34_RS02965;old_locus_tag=CCO34_02965 NZ_NPMD01000001.1 Protein Homology CDS 549498 550277 . + 0 ID=cds-WP_000580299.1;Parent=gene-CCO34_RS02965;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=CCO34_RS02965;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 550302 551348 . + . ID=gene-CCO34_RS02970;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=CCO34_RS02970;old_locus_tag=CCO34_02970 NZ_NPMD01000001.1 Protein Homology CDS 550302 551348 . + 0 ID=cds-WP_000759329.1;Parent=gene-CCO34_RS02970;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=CCO34_RS02970;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 551430 552251 . - . ID=gene-CCO34_RS02975;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=CCO34_RS02975;old_locus_tag=CCO34_02975 NZ_NPMD01000001.1 Protein Homology CDS 551430 552251 . - 0 ID=cds-WP_001191856.1;Parent=gene-CCO34_RS02975;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=CCO34_RS02975;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 552270 553181 . - . ID=gene-CCO34_RS02980;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=CCO34_RS02980;old_locus_tag=CCO34_02980 NZ_NPMD01000001.1 Protein Homology CDS 552270 553181 . - 0 ID=cds-WP_000291321.1;Parent=gene-CCO34_RS02980;Dbxref=GenBank:WP_000291321.1;Name=WP_000291321.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=CCO34_RS02980;product=N-acetylglucosamine kinase;protein_id=WP_000291321.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 553210 554454 . - . ID=gene-CCO34_RS02985;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=CCO34_RS02985;old_locus_tag=CCO34_02985 NZ_NPMD01000001.1 Protein Homology CDS 553210 554454 . - 0 ID=cds-WP_000168092.1;Parent=gene-CCO34_RS02985;Dbxref=GenBank:WP_000168092.1;Name=WP_000168092.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=CCO34_RS02985;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168092.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 554454 555155 . - . ID=gene-CCO34_RS02990;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=CCO34_RS02990;old_locus_tag=CCO34_02990 NZ_NPMD01000001.1 Protein Homology CDS 554454 555155 . - 0 ID=cds-WP_001033714.1;Parent=gene-CCO34_RS02990;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=CCO34_RS02990;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 555148 556347 . - . ID=gene-CCO34_RS02995;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=CCO34_RS02995;old_locus_tag=CCO34_02995 NZ_NPMD01000001.1 Protein Homology CDS 555148 556347 . - 0 ID=cds-WP_176452906.1;Parent=gene-CCO34_RS02995;Dbxref=GenBank:WP_176452906.1;Name=WP_176452906.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=CCO34_RS02995;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_176452906.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 556685 560131 . + . ID=gene-CCO34_RS03000;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CCO34_RS03000;old_locus_tag=CCO34_03000 NZ_NPMD01000001.1 Protein Homology CDS 556685 560131 . + 0 ID=cds-WP_001114323.1;Parent=gene-CCO34_RS03000;Dbxref=GenBank:WP_001114323.1;Name=WP_001114323.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=CCO34_RS03000;product=transcription-repair coupling factor;protein_id=WP_001114323.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 560279 561244 . + . ID=gene-CCO34_RS03005;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=CCO34_RS03005;old_locus_tag=CCO34_03005 NZ_NPMD01000001.1 Protein Homology CDS 560279 561244 . + 0 ID=cds-WP_000482969.1;Parent=gene-CCO34_RS03005;Dbxref=GenBank:WP_000482969.1;Name=WP_000482969.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=CCO34_RS03005;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482969.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 561341 561598 . - . ID=gene-CCO34_RS03010;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=CCO34_RS03010;old_locus_tag=CCO34_03010 NZ_NPMD01000001.1 Protein Homology CDS 561341 561598 . - 0 ID=cds-WP_000800134.1;Parent=gene-CCO34_RS03010;Dbxref=GenBank:WP_000800134.1;Name=WP_000800134.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=CCO34_RS03010;product=multiple stress resistance protein BhsA;protein_id=WP_000800134.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 561840 562475 . + . ID=gene-CCO34_RS03015;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=CCO34_RS03015;old_locus_tag=CCO34_03015 NZ_NPMD01000001.1 Protein Homology CDS 561840 562475 . + 0 ID=cds-WP_000205985.1;Parent=gene-CCO34_RS03015;Dbxref=GenBank:WP_000205985.1;Name=WP_000205985.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835112.1;locus_tag=CCO34_RS03015;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205985.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 562549 563088 . - . ID=gene-CCO34_RS03020;Name=CCO34_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03020;old_locus_tag=CCO34_03020 NZ_NPMD01000001.1 Protein Homology CDS 562549 563088 . - 0 ID=cds-WP_001043449.1;Parent=gene-CCO34_RS03020;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=CCO34_RS03020;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 563267 564571 . - . ID=gene-CCO34_RS03025;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=CCO34_RS03025;old_locus_tag=CCO34_03025 NZ_NPMD01000001.1 Protein Homology CDS 563267 564571 . - 0 ID=cds-WP_000211053.1;Parent=gene-CCO34_RS03025;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=CCO34_RS03025;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 564825 565367 . - . ID=gene-CCO34_RS03030;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=CCO34_RS03030;old_locus_tag=CCO34_03030 NZ_NPMD01000001.1 Protein Homology CDS 564825 565367 . - 0 ID=cds-WP_000587943.1;Parent=gene-CCO34_RS03030;Dbxref=GenBank:WP_000587943.1;Name=WP_000587943.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=CCO34_RS03030;product=alpha/beta hydrolase YcfP;protein_id=WP_000587943.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 565392 566417 . - . ID=gene-CCO34_RS03035;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=CCO34_RS03035;old_locus_tag=CCO34_03035 NZ_NPMD01000001.1 Protein Homology CDS 565392 566417 . - 0 ID=cds-WP_000529340.1;Parent=gene-CCO34_RS03035;Dbxref=GenBank:WP_000529340.1;Name=WP_000529340.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=CCO34_RS03035;product=beta-N-acetylhexosaminidase;protein_id=WP_000529340.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 566428 567252 . - . ID=gene-CCO34_RS03040;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=CCO34_RS03040;old_locus_tag=CCO34_03040 NZ_NPMD01000001.1 Protein Homology CDS 566428 567252 . - 0 ID=cds-WP_023209855.1;Parent=gene-CCO34_RS03040;Dbxref=GenBank:WP_023209855.1;Name=WP_023209855.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=CCO34_RS03040;product=thiamine kinase;protein_id=WP_023209855.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 567233 567871 . - . ID=gene-CCO34_RS03045;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=CCO34_RS03045;old_locus_tag=CCO34_03045 NZ_NPMD01000001.1 Protein Homology CDS 567233 567871 . - 0 ID=cds-WP_000164359.1;Parent=gene-CCO34_RS03045;Dbxref=GenBank:WP_000164359.1;Name=WP_000164359.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=CCO34_RS03045;product=penicillin-binding protein activator LpoB;protein_id=WP_000164359.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 567885 568259 . - . ID=gene-CCO34_RS03050;Name=CCO34_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03050;old_locus_tag=CCO34_03050 NZ_NPMD01000001.1 Protein Homology CDS 567885 568259 . - 0 ID=cds-WP_000589563.1;Parent=gene-CCO34_RS03050;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=CCO34_RS03050;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 568262 568621 . - . ID=gene-CCO34_RS03055;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=CCO34_RS03055;old_locus_tag=CCO34_03055 NZ_NPMD01000001.1 Protein Homology CDS 568262 568621 . - 0 ID=cds-WP_001532068.1;Parent=gene-CCO34_RS03055;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=CCO34_RS03055;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 568963 571137 . + . ID=gene-CCO34_RS03060;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=CCO34_RS03060;old_locus_tag=CCO34_03060 NZ_NPMD01000001.1 Protein Homology CDS 568963 571137 . + 0 ID=cds-WP_023209856.1;Parent=gene-CCO34_RS03060;Dbxref=GenBank:WP_023209856.1;Name=WP_023209856.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=CCO34_RS03060;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_023209856.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 571222 572655 . - . ID=gene-CCO34_RS03065;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CCO34_RS03065;old_locus_tag=CCO34_03065 NZ_NPMD01000001.1 Protein Homology CDS 571222 572655 . - 0 ID=cds-WP_094965395.1;Parent=gene-CCO34_RS03065;Dbxref=GenBank:WP_094965395.1;Name=WP_094965395.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=CCO34_RS03065;product=PTS glucose transporter subunit IIBC;protein_id=WP_094965395.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 572950 573747 . - . ID=gene-CCO34_RS03070;Name=CCO34_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03070;old_locus_tag=CCO34_03070 NZ_NPMD01000001.1 Protein Homology CDS 572950 573747 . - 0 ID=cds-WP_000480277.1;Parent=gene-CCO34_RS03070;Dbxref=GenBank:WP_000480277.1;Name=WP_000480277.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=CCO34_RS03070;product=metal-dependent hydrolase;protein_id=WP_000480277.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 573758 574762 . - . ID=gene-CCO34_RS03075;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=CCO34_RS03075;old_locus_tag=CCO34_03075 NZ_NPMD01000001.1 Protein Homology CDS 573758 574762 . - 0 ID=cds-WP_000872450.1;Parent=gene-CCO34_RS03075;Dbxref=GenBank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=CCO34_RS03075;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 574759 575400 . - . ID=gene-CCO34_RS03080;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CCO34_RS03080;old_locus_tag=CCO34_03080 NZ_NPMD01000001.1 Protein Homology CDS 574759 575400 . - 0 ID=cds-WP_000535396.1;Parent=gene-CCO34_RS03080;Dbxref=GenBank:WP_000535396.1;Name=WP_000535396.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=CCO34_RS03080;product=dTMP kinase;protein_id=WP_000535396.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 575390 576412 . - . ID=gene-CCO34_RS03085;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=CCO34_RS03085;old_locus_tag=CCO34_03085 NZ_NPMD01000001.1 Protein Homology CDS 575390 576412 . - 0 ID=cds-WP_000736459.1;Parent=gene-CCO34_RS03085;Dbxref=GenBank:WP_000736459.1;Name=WP_000736459.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=CCO34_RS03085;product=cell division protein YceG;protein_id=WP_000736459.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 576415 577224 . - . ID=gene-CCO34_RS03090;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=CCO34_RS03090;old_locus_tag=CCO34_03090 NZ_NPMD01000001.1 Protein Homology CDS 576415 577224 . - 0 ID=cds-WP_000478656.1;Parent=gene-CCO34_RS03090;Dbxref=GenBank:WP_000478656.1;Name=WP_000478656.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=CCO34_RS03090;product=aminodeoxychorismate lyase;protein_id=WP_000478656.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 577348 578589 . - . ID=gene-CCO34_RS03095;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CCO34_RS03095;old_locus_tag=CCO34_03095 NZ_NPMD01000001.1 Protein Homology CDS 577348 578589 . - 0 ID=cds-WP_000044664.1;Parent=gene-CCO34_RS03095;Dbxref=GenBank:WP_000044664.1;Name=WP_000044664.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=CCO34_RS03095;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044664.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 578675 578911 . - . ID=gene-CCO34_RS03100;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=CCO34_RS03100;old_locus_tag=CCO34_03100 NZ_NPMD01000001.1 Protein Homology CDS 578675 578911 . - 0 ID=cds-WP_000103754.1;Parent=gene-CCO34_RS03100;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=CCO34_RS03100;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 579067 579801 . - . ID=gene-CCO34_RS03105;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CCO34_RS03105;old_locus_tag=CCO34_03105 NZ_NPMD01000001.1 Protein Homology CDS 579067 579801 . - 0 ID=cds-WP_000007236.1;Parent=gene-CCO34_RS03105;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=CCO34_RS03105;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 579814 580743 . - . ID=gene-CCO34_RS03110;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CCO34_RS03110;old_locus_tag=CCO34_03110 NZ_NPMD01000001.1 Protein Homology CDS 579814 580743 . - 0 ID=cds-WP_000191343.1;Parent=gene-CCO34_RS03110;Dbxref=GenBank:WP_000191343.1;Name=WP_000191343.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=CCO34_RS03110;product=ACP S-malonyltransferase;protein_id=WP_000191343.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 580759 581712 . - . ID=gene-CCO34_RS03115;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=CCO34_RS03115;old_locus_tag=CCO34_03115 NZ_NPMD01000001.1 Protein Homology CDS 580759 581712 . - 0 ID=cds-WP_000288148.1;Parent=gene-CCO34_RS03115;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=CCO34_RS03115;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 581792 582871 . - . ID=gene-CCO34_RS03120;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CCO34_RS03120;old_locus_tag=CCO34_03120 NZ_NPMD01000001.1 Protein Homology CDS 581792 582871 . - 0 ID=cds-WP_001518286.1;Parent=gene-CCO34_RS03120;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=CCO34_RS03120;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 583005 583178 . - . ID=gene-CCO34_RS03125;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CCO34_RS03125;old_locus_tag=CCO34_03125 NZ_NPMD01000001.1 Protein Homology CDS 583005 583178 . - 0 ID=cds-WP_000290727.1;Parent=gene-CCO34_RS03125;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=CCO34_RS03125;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 583230 583751 . - . ID=gene-CCO34_RS03130;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=CCO34_RS03130;old_locus_tag=CCO34_03130 NZ_NPMD01000001.1 Protein Homology CDS 583230 583751 . - 0 ID=cds-WP_001174492.1;Parent=gene-CCO34_RS03130;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=CCO34_RS03130;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 583949 584533 . + . ID=gene-CCO34_RS03135;Name=CCO34_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03135;old_locus_tag=CCO34_03135 NZ_NPMD01000001.1 Protein Homology CDS 583949 584533 . + 0 ID=cds-WP_001137605.1;Parent=gene-CCO34_RS03135;Dbxref=GenBank:WP_001137605.1;Name=WP_001137605.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=CCO34_RS03135;product=Maf family protein;protein_id=WP_001137605.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 584605 584829 . - . ID=gene-CCO34_RS03140;Name=CCO34_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03140;old_locus_tag=CCO34_03140 NZ_NPMD01000001.1 GeneMarkS-2+ CDS 584605 584829 . - 0 ID=cds-WP_000528431.1;Parent=gene-CCO34_RS03140;Dbxref=GenBank:WP_000528431.1;Name=WP_000528431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS03140;product=hypothetical protein;protein_id=WP_000528431.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 585032 585775 . - . ID=gene-CCO34_RS03145;Name=CCO34_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03145;old_locus_tag=CCO34_03145 NZ_NPMD01000001.1 Protein Homology CDS 585032 585775 . - 0 ID=cds-WP_077905922.1;Parent=gene-CCO34_RS03145;Dbxref=GenBank:WP_077905922.1;Name=WP_077905922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=CCO34_RS03145;product=DUF3053 domain-containing protein;protein_id=WP_077905922.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 585931 586890 . - . ID=gene-CCO34_RS03150;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=CCO34_RS03150;old_locus_tag=CCO34_03150 NZ_NPMD01000001.1 Protein Homology CDS 585931 586890 . - 0 ID=cds-WP_000846325.1;Parent=gene-CCO34_RS03150;Dbxref=GenBank:WP_000846325.1;Name=WP_000846325.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=CCO34_RS03150;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846325.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 587464 590667 . + . ID=gene-CCO34_RS03160;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=CCO34_RS03160;old_locus_tag=CCO34_03160 NZ_NPMD01000001.1 Protein Homology CDS 587464 590667 . + 0 ID=cds-WP_023228783.1;Parent=gene-CCO34_RS03160;Dbxref=GenBank:WP_023228783.1;Name=WP_023228783.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=CCO34_RS03160;product=ribonuclease E;protein_id=WP_023228783.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 590924 591877 . - . ID=gene-CCO34_RS03170;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=CCO34_RS03170;old_locus_tag=CCO34_03170 NZ_NPMD01000001.1 Protein Homology CDS 590924 591877 . - 0 ID=cds-WP_001223032.1;Parent=gene-CCO34_RS03170;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=CCO34_RS03170;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 591892 593553 . - . ID=gene-CCO34_RS03175;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=CCO34_RS03175;old_locus_tag=CCO34_03175 NZ_NPMD01000001.1 Protein Homology CDS 591892 593553 . - 0 ID=cds-WP_000096425.1;Parent=gene-CCO34_RS03175;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=CCO34_RS03175;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 593618 594568 . - . ID=gene-CCO34_RS03180;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=CCO34_RS03180;old_locus_tag=CCO34_03180 NZ_NPMD01000001.1 Protein Homology CDS 593618 594568 . - 0 ID=cds-WP_000578678.1;Parent=gene-CCO34_RS03180;Dbxref=GenBank:WP_000578678.1;Name=WP_000578678.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=CCO34_RS03180;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578678.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 594568 595665 . - . ID=gene-CCO34_RS03185;Name=CCO34_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03185;old_locus_tag=CCO34_03185 NZ_NPMD01000001.1 Protein Homology CDS 594568 595665 . - 0 ID=cds-WP_001518955.1;Parent=gene-CCO34_RS03185;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=CCO34_RS03185;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 595677 596375 . - . ID=gene-CCO34_RS03190;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=CCO34_RS03190;old_locus_tag=CCO34_03190 NZ_NPMD01000001.1 Protein Homology CDS 595677 596375 . - 0 ID=cds-WP_001174897.1;Parent=gene-CCO34_RS03190;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=CCO34_RS03190;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 596430 597212 . - . ID=gene-CCO34_RS03195;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=CCO34_RS03195;old_locus_tag=CCO34_03195 NZ_NPMD01000001.1 Protein Homology CDS 596430 597212 . - 0 ID=cds-WP_000625851.1;Parent=gene-CCO34_RS03195;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=CCO34_RS03195;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 597226 597981 . - . ID=gene-CCO34_RS03200;Name=CCO34_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03200;old_locus_tag=CCO34_03200 NZ_NPMD01000001.1 Protein Homology CDS 597226 597981 . - 0 ID=cds-WP_000349278.1;Parent=gene-CCO34_RS03200;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=CCO34_RS03200;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 598002 599213 . - . ID=gene-CCO34_RS03205;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=CCO34_RS03205;old_locus_tag=CCO34_03205 NZ_NPMD01000001.1 Protein Homology CDS 598002 599213 . - 0 ID=cds-WP_094965396.1;Parent=gene-CCO34_RS03205;Dbxref=GenBank:WP_094965396.1;Name=WP_094965396.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=CCO34_RS03205;product=flagellar hook protein FlgE;protein_id=WP_094965396.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 599240 599938 . - . ID=gene-CCO34_RS03210;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=CCO34_RS03210;old_locus_tag=CCO34_03210 NZ_NPMD01000001.1 Protein Homology CDS 599240 599938 . - 0 ID=cds-WP_000020450.1;Parent=gene-CCO34_RS03210;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=CCO34_RS03210;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 599950 600354 . - . ID=gene-CCO34_RS03215;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=CCO34_RS03215;old_locus_tag=CCO34_03215 NZ_NPMD01000001.1 Protein Homology CDS 599950 600354 . - 0 ID=cds-WP_001196448.1;Parent=gene-CCO34_RS03215;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=CCO34_RS03215;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 600358 600774 . - . ID=gene-CCO34_RS03220;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=CCO34_RS03220;old_locus_tag=CCO34_03220 NZ_NPMD01000001.1 Protein Homology CDS 600358 600774 . - 0 ID=cds-WP_000887043.1;Parent=gene-CCO34_RS03220;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=CCO34_RS03220;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 600931 601590 . + . ID=gene-CCO34_RS03230;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=CCO34_RS03230;old_locus_tag=CCO34_03230 NZ_NPMD01000001.1 Protein Homology CDS 600931 601590 . + 0 ID=cds-WP_001194086.1;Parent=gene-CCO34_RS03230;Dbxref=GenBank:WP_001194086.1;Name=WP_001194086.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=CCO34_RS03230;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194086.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 601682 601975 . + . ID=gene-CCO34_RS03235;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=CCO34_RS03235;old_locus_tag=CCO34_03235 NZ_NPMD01000001.1 Protein Homology CDS 601682 601975 . + 0 ID=cds-WP_000020893.1;Parent=gene-CCO34_RS03235;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=CCO34_RS03235;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 601980 602402 . + . ID=gene-CCO34_RS03240;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=CCO34_RS03240;old_locus_tag=CCO34_03240 NZ_NPMD01000001.1 Protein Homology CDS 601980 602402 . + 0 ID=cds-WP_000197547.1;Parent=gene-CCO34_RS03240;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=CCO34_RS03240;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 602484 604019 . - . ID=gene-CCO34_RS03245;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=CCO34_RS03245;old_locus_tag=CCO34_03245 NZ_NPMD01000001.1 Protein Homology CDS 602484 604019 . - 0 ID=cds-WP_001537775.1;Parent=gene-CCO34_RS03245;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=CCO34_RS03245;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 604323 605246 . - . ID=gene-CCO34_RS03250;Name=CCO34_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03250;old_locus_tag=CCO34_03250 NZ_NPMD01000001.1 Protein Homology CDS 604323 605246 . - 0 ID=cds-WP_001259728.1;Parent=gene-CCO34_RS03250;Dbxref=GenBank:WP_001259728.1;Name=WP_001259728.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=CCO34_RS03250;product=Gfo/Idh/MocA family protein;protein_id=WP_001259728.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 605248 605895 . - . ID=gene-CCO34_RS03255;Name=CCO34_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03255;old_locus_tag=CCO34_03255 NZ_NPMD01000001.1 Protein Homology CDS 605248 605895 . - 0 ID=cds-WP_000873047.1;Parent=gene-CCO34_RS03255;Dbxref=GenBank:WP_000873047.1;Name=WP_000873047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=CCO34_RS03255;product=YceH family protein;protein_id=WP_000873047.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 605931 606515 . - . ID=gene-CCO34_RS03260;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=CCO34_RS03260;old_locus_tag=CCO34_03260 NZ_NPMD01000001.1 Protein Homology CDS 605931 606515 . - 0 ID=cds-WP_000468204.1;Parent=gene-CCO34_RS03260;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=CCO34_RS03260;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 606752 607960 . + . ID=gene-CCO34_RS03265;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=CCO34_RS03265;old_locus_tag=CCO34_03265 NZ_NPMD01000001.1 Protein Homology CDS 606752 607960 . + 0 ID=cds-WP_000092174.1;Parent=gene-CCO34_RS03265;Dbxref=GenBank:WP_000092174.1;Name=WP_000092174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=CCO34_RS03265;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092174.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 608024 608671 . + . ID=gene-CCO34_RS03270;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=CCO34_RS03270;old_locus_tag=CCO34_03270 NZ_NPMD01000001.1 Protein Homology CDS 608024 608671 . + 0 ID=cds-WP_000780893.1;Parent=gene-CCO34_RS03270;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=CCO34_RS03270;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 608796 609356 . + . ID=gene-CCO34_RS03275;Name=CCO34_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03275;old_locus_tag=CCO34_03275 NZ_NPMD01000001.1 Protein Homology CDS 608796 609356 . + 0 ID=cds-WP_000713054.1;Parent=gene-CCO34_RS03275;Dbxref=GenBank:WP_000713054.1;Name=WP_000713054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=CCO34_RS03275;product=lipoprotein;protein_id=WP_000713054.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 609460 610506 . + . ID=gene-CCO34_RS03280;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=CCO34_RS03280;old_locus_tag=CCO34_03280 NZ_NPMD01000001.1 Protein Homology CDS 609460 610506 . + 0 ID=cds-WP_000126587.1;Parent=gene-CCO34_RS03280;Dbxref=GenBank:WP_000126587.1;Name=WP_000126587.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=CCO34_RS03280;product=dihydroorotase;protein_id=WP_000126587.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 610580 610825 . + . ID=gene-CCO34_RS03285;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=CCO34_RS03285;old_locus_tag=CCO34_03285 NZ_NPMD01000001.1 Protein Homology CDS 610580 610825 . + 0 ID=cds-WP_001217763.1;Parent=gene-CCO34_RS03285;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=CCO34_RS03285;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 611115 611369 . + . ID=gene-CCO34_RS03290;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=CCO34_RS03290;old_locus_tag=CCO34_03290 NZ_NPMD01000001.1 Protein Homology CDS 611115 611369 . + 0 ID=cds-WP_000414441.1;Parent=gene-CCO34_RS03290;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=CCO34_RS03290;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 611482 612600 . + . ID=gene-CCO34_RS03295;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=CCO34_RS03295;old_locus_tag=CCO34_03295 NZ_NPMD01000001.1 Protein Homology CDS 611482 612600 . + 0 ID=cds-WP_000872778.1;Parent=gene-CCO34_RS03295;Dbxref=GenBank:WP_000872778.1;Name=WP_000872778.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=CCO34_RS03295;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872778.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 612641 612754 . + . ID=gene-CCO34_RS03300;Name=CCO34_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03300;old_locus_tag=CCO34_03300 NZ_NPMD01000001.1 Protein Homology CDS 612641 612754 . + 0 ID=cds-WP_001253282.1;Parent=gene-CCO34_RS03300;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=CCO34_RS03300;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 613017 613589 . + . ID=gene-CCO34_RS03310;Name=CCO34_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03310;old_locus_tag=CCO34_03310 NZ_NPMD01000001.1 Protein Homology CDS 613017 613589 . + 0 ID=cds-WP_001159791.1;Parent=gene-CCO34_RS03310;Dbxref=GenBank:WP_001159791.1;Name=WP_001159791.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=CCO34_RS03310;product=cytochrome b;protein_id=WP_001159791.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 613586 614161 . + . ID=gene-CCO34_RS03315;Name=CCO34_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03315;old_locus_tag=CCO34_03315 NZ_NPMD01000001.1 Protein Homology CDS 613586 614161 . + 0 ID=cds-WP_000739886.1;Parent=gene-CCO34_RS03315;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=CCO34_RS03315;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 614213 615265 . - . ID=gene-CCO34_RS03320;Name=CCO34_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03320;old_locus_tag=CCO34_03320 NZ_NPMD01000001.1 Protein Homology CDS 614213 615265 . - 0 ID=cds-WP_001144630.1;Parent=gene-CCO34_RS03320;Dbxref=GenBank:WP_001144630.1;Name=WP_001144630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=CCO34_RS03320;product=rhodanese-related sulfurtransferase;protein_id=WP_001144630.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 615485 616405 . + . ID=gene-CCO34_RS03325;Name=CCO34_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03325;old_locus_tag=CCO34_03325 NZ_NPMD01000001.1 Protein Homology CDS 615485 616405 . + 0 ID=cds-WP_000163977.1;Parent=gene-CCO34_RS03325;Dbxref=GenBank:WP_000163977.1;Name=WP_000163977.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=CCO34_RS03325;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163977.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 616560 617774 . + . ID=gene-CCO34_RS03335;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=CCO34_RS03335;old_locus_tag=CCO34_03335 NZ_NPMD01000001.1 Protein Homology CDS 616560 617774 . + 0 ID=cds-WP_080181016.1;Parent=gene-CCO34_RS03335;Dbxref=GenBank:WP_080181016.1;Name=WP_080181016.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=CCO34_RS03335;product=multidrug efflux MFS transporter MdtG;protein_id=WP_080181016.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 617856 618230 . + . ID=gene-CCO34_RS03340;Name=CCO34_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03340;old_locus_tag=CCO34_03340 NZ_NPMD01000001.1 Protein Homology CDS 617856 618230 . + 0 ID=cds-WP_000180050.1;Parent=gene-CCO34_RS03340;Dbxref=GenBank:WP_000180050.1;Name=WP_000180050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=CCO34_RS03340;product=MysB family protein;protein_id=WP_000180050.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 618231 618458 . - . ID=gene-CCO34_RS03345;Name=CCO34_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03345;old_locus_tag=CCO34_03345 NZ_NPMD01000001.1 Protein Homology CDS 618231 618458 . - 0 ID=cds-WP_001217832.1;Parent=gene-CCO34_RS03345;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=CCO34_RS03345;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 618532 621075 . - . ID=gene-CCO34_RS03350;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=CCO34_RS03350;old_locus_tag=CCO34_03350 NZ_NPMD01000001.1 Protein Homology CDS 618532 621075 . - 0 ID=cds-WP_001044609.1;Parent=gene-CCO34_RS03350;Dbxref=GenBank:WP_001044609.1;Name=WP_001044609.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=CCO34_RS03350;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001044609.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 621068 622603 . - . ID=gene-CCO34_RS03355;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=CCO34_RS03355;old_locus_tag=CCO34_03355 NZ_NPMD01000001.1 Protein Homology CDS 621068 622603 . - 0 ID=cds-WP_001562609.1;Parent=gene-CCO34_RS03355;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=CCO34_RS03355;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 622875 624029 . + . ID=gene-CCO34_RS03360;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=CCO34_RS03360;old_locus_tag=CCO34_03360 NZ_NPMD01000001.1 Protein Homology CDS 622875 624029 . + 0 ID=cds-WP_000100070.1;Parent=gene-CCO34_RS03360;Dbxref=GenBank:WP_000100070.1;Name=WP_000100070.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=CCO34_RS03360;product=glucans biosynthesis protein MdoC;protein_id=WP_000100070.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 624046 625533 . - . ID=gene-CCO34_RS03365;Name=CCO34_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03365;old_locus_tag=CCO34_03365 NZ_NPMD01000001.1 Protein Homology CDS 624046 625533 . - 0 ID=cds-WP_000976323.1;Parent=gene-CCO34_RS03365;Dbxref=GenBank:WP_000976323.1;Name=WP_000976323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=CCO34_RS03365;product=phospholipase D family protein;protein_id=WP_000976323.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 625469 626008 . - . ID=gene-CCO34_RS03370;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=CCO34_RS03370;old_locus_tag=CCO34_03370 NZ_NPMD01000001.1 Protein Homology CDS 625469 626008 . - 0 ID=cds-WP_000203941.1;Parent=gene-CCO34_RS03370;Dbxref=GenBank:WP_000203941.1;Name=WP_000203941.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=CCO34_RS03370;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203941.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 626096 626416 . - . ID=gene-CCO34_RS03375;Name=CCO34_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03375;old_locus_tag=CCO34_03375 NZ_NPMD01000001.1 Protein Homology CDS 626096 626416 . - 0 ID=cds-WP_000111254.1;Parent=gene-CCO34_RS03375;Dbxref=GenBank:WP_000111254.1;Name=WP_000111254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=CCO34_RS03375;product=type 1 fimbrial protein;protein_id=WP_000111254.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 626547 626873 . - . ID=gene-CCO34_RS03380;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=CCO34_RS03380;old_locus_tag=CCO34_03380 NZ_NPMD01000001.1 Protein Homology CDS 626547 626873 . - 0 ID=cds-WP_000557256.1;Parent=gene-CCO34_RS03380;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=CCO34_RS03380;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 626935 627390 . - . ID=gene-CCO34_RS03385;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=CCO34_RS03385;old_locus_tag=CCO34_03385 NZ_NPMD01000001.1 Protein Homology CDS 626935 627390 . - 0 ID=cds-WP_000771416.1;Parent=gene-CCO34_RS03385;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=CCO34_RS03385;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 627432 627887 . - . ID=gene-CCO34_RS03390;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=CCO34_RS03390;old_locus_tag=CCO34_03390 NZ_NPMD01000001.1 Protein Homology CDS 627432 627887 . - 0 ID=cds-WP_000791655.1;Parent=gene-CCO34_RS03390;Dbxref=GenBank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=CCO34_RS03390;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 628642 629292 . + . ID=gene-CCO34_RS03400;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=CCO34_RS03400;old_locus_tag=CCO34_03400 NZ_NPMD01000001.1 Protein Homology CDS 628642 629292 . + 0 ID=cds-WP_000481519.1;Parent=gene-CCO34_RS03400;Dbxref=GenBank:WP_000481519.1;Name=WP_000481519.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=CCO34_RS03400;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481519.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 629297 629692 . + . ID=gene-CCO34_RS03405;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=CCO34_RS03405;old_locus_tag=CCO34_03405 NZ_NPMD01000001.1 Protein Homology CDS 629297 629692 . + 0 ID=cds-WP_000833307.1;Parent=gene-CCO34_RS03405;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=CCO34_RS03405;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 629719 630135 . + . ID=gene-CCO34_RS03410;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=CCO34_RS03410;old_locus_tag=CCO34_03410 NZ_NPMD01000001.1 Protein Homology CDS 629719 630135 . + 0 ID=cds-WP_001264073.1;Parent=gene-CCO34_RS03410;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=CCO34_RS03410;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 630162 630995 . + . ID=gene-CCO34_RS03415;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=CCO34_RS03415;old_locus_tag=CCO34_03415 NZ_NPMD01000001.1 Protein Homology CDS 630162 630995 . + 0 ID=cds-WP_001137620.1;Parent=gene-CCO34_RS03415;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=CCO34_RS03415;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 631034 631516 . - . ID=gene-CCO34_RS03420;Name=CCO34_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03420;old_locus_tag=CCO34_03420 NZ_NPMD01000001.1 Protein Homology CDS 631034 631516 . - 0 ID=cds-WP_001546652.1;Parent=gene-CCO34_RS03420;Dbxref=GenBank:WP_001546652.1;Name=WP_001546652.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=CCO34_RS03420;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 631617 632171 . - . ID=gene-CCO34_RS03425;Name=CCO34_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03425;old_locus_tag=CCO34_03425 NZ_NPMD01000001.1 Protein Homology CDS 631617 632171 . - 0 ID=cds-WP_001001892.1;Parent=gene-CCO34_RS03425;Dbxref=GenBank:WP_001001892.1;Name=WP_001001892.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=CCO34_RS03425;product=TorD/DmsD family molecular chaperone;protein_id=WP_001001892.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 632195 632932 . - . ID=gene-CCO34_RS03430;Name=CCO34_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03430;old_locus_tag=CCO34_03430 NZ_NPMD01000001.1 Protein Homology CDS 632195 632932 . - 0 ID=cds-WP_000283643.1;Parent=gene-CCO34_RS03430;Dbxref=GenBank:WP_000283643.1;Name=WP_000283643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=CCO34_RS03430;product=phosphatase;protein_id=WP_000283643.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 633017 633955 . - . ID=gene-CCO34_RS03435;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=CCO34_RS03435;old_locus_tag=CCO34_03435 NZ_NPMD01000001.1 Protein Homology CDS 633017 633955 . - 0 ID=cds-WP_000402551.1;Parent=gene-CCO34_RS03435;Dbxref=GenBank:WP_000402551.1;Name=WP_000402551.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=CCO34_RS03435;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402551.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 634192 634279 . + . ID=gene-CCO34_RS03445;Name=CCO34_RS03445;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS03445;old_locus_tag=CCO34_03445 NZ_NPMD01000001.1 tRNAscan-SE tRNA 634192 634279 . + . ID=rna-CCO34_RS03445;Parent=gene-CCO34_RS03445;anticodon=(pos:634226..634228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS03445;product=tRNA-Ser NZ_NPMD01000001.1 tRNAscan-SE exon 634192 634279 . + . ID=exon-CCO34_RS03445-1;Parent=rna-CCO34_RS03445;anticodon=(pos:634226..634228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS03445;product=tRNA-Ser NZ_NPMD01000001.1 RefSeq gene 634328 634463 . + . ID=gene-CCO34_RS03450;Name=CCO34_RS03450;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS03450;old_locus_tag=CCO34_03450 NZ_NPMD01000001.1 cmsearch ncRNA 634328 634463 . + . ID=rna-CCO34_RS03450;Parent=gene-CCO34_RS03450;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS03450;product=RtT sRNA NZ_NPMD01000001.1 cmsearch exon 634328 634463 . + . ID=exon-CCO34_RS03450-1;Parent=rna-CCO34_RS03450;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS03450;product=RtT sRNA NZ_NPMD01000001.1 RefSeq gene 634615 635721 . - . ID=gene-CCO34_RS03455;Name=CCO34_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03455;old_locus_tag=CCO34_03455 NZ_NPMD01000001.1 Protein Homology CDS 634615 635721 . - 0 ID=cds-WP_000988585.1;Parent=gene-CCO34_RS03455;Dbxref=GenBank:WP_000988585.1;Name=WP_000988585.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=CCO34_RS03455;product=Gfo/Idh/MocA family protein;protein_id=WP_000988585.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 635732 637012 . - . ID=gene-CCO34_RS03460;Name=CCO34_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03460;old_locus_tag=CCO34_03460 NZ_NPMD01000001.1 Protein Homology CDS 635732 637012 . - 0 ID=cds-WP_000560758.1;Parent=gene-CCO34_RS03460;Dbxref=GenBank:WP_000560758.1;Name=WP_000560758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=CCO34_RS03460;product=MFS transporter;protein_id=WP_000560758.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 637295 637987 . - . ID=gene-CCO34_RS03465;Name=CCO34_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03465;old_locus_tag=CCO34_03465 NZ_NPMD01000001.1 Protein Homology CDS 637295 637987 . - 0 ID=cds-WP_000700610.1;Parent=gene-CCO34_RS03465;Dbxref=GenBank:WP_000700610.1;Name=WP_000700610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=CCO34_RS03465;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000700610.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 638033 639187 . - . ID=gene-CCO34_RS03470;Name=CCO34_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03470;old_locus_tag=CCO34_03470 NZ_NPMD01000001.1 Protein Homology CDS 638033 639187 . - 0 ID=cds-WP_000525761.1;Parent=gene-CCO34_RS03470;Dbxref=GenBank:WP_000525761.1;Name=WP_000525761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=CCO34_RS03470;product=N-acetylneuraminate epimerase;protein_id=WP_000525761.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 639693 640373 . + . ID=gene-CCO34_RS03475;Name=CCO34_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03475;old_locus_tag=CCO34_03475 NZ_NPMD01000001.1 Protein Homology CDS 639693 640373 . + 0 ID=cds-WP_001535983.1;Parent=gene-CCO34_RS03475;Dbxref=GenBank:WP_001535983.1;Name=WP_001535983.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=CCO34_RS03475;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_001535983.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 640702 642198 . + . ID=gene-CCO34_RS03485;Name=CCO34_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03485;old_locus_tag=CCO34_03485 NZ_NPMD01000001.1 Protein Homology CDS 640702 642198 . + 0 ID=cds-WP_000628086.1;Parent=gene-CCO34_RS03485;Dbxref=GenBank:WP_000628086.1;Name=WP_000628086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=CCO34_RS03485;product=sodium:solute symporter;protein_id=WP_000628086.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 642484 643365 . + . ID=gene-CCO34_RS03490;Name=CCO34_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03490;old_locus_tag=CCO34_03490 NZ_NPMD01000001.1 Protein Homology CDS 642484 643365 . + 0 ID=cds-WP_000433673.1;Parent=gene-CCO34_RS03490;Dbxref=GenBank:WP_000433673.1;Name=WP_000433673.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=CCO34_RS03490;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000433673.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 643470 644258 . - . ID=gene-CCO34_RS03495;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=CCO34_RS03495;old_locus_tag=CCO34_03495 NZ_NPMD01000001.1 Protein Homology CDS 643470 644258 . - 0 ID=cds-WP_000533527.1;Parent=gene-CCO34_RS03495;Dbxref=GenBank:WP_000533527.1;Name=WP_000533527.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=CCO34_RS03495;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533527.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 645151 646659 . - . ID=gene-CCO34_RS03505;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CCO34_RS03505;old_locus_tag=CCO34_03505 NZ_NPMD01000001.1 Protein Homology CDS 645151 646659 . - 0 ID=cds-WP_001018467.1;Parent=gene-CCO34_RS03505;Dbxref=GenBank:WP_001018467.1;Name=WP_001018467.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=CCO34_RS03505;product=sodium/proline symporter PutP;protein_id=WP_001018467.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 647081 651043 . + . ID=gene-CCO34_RS03510;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=CCO34_RS03510;old_locus_tag=CCO34_03510 NZ_NPMD01000001.1 Protein Homology CDS 647081 651043 . + 0 ID=cds-WP_080185553.1;Parent=gene-CCO34_RS03510;Dbxref=GenBank:WP_080185553.1;Name=WP_080185553.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=CCO34_RS03510;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_080185553.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 651102 651497 . + . ID=gene-CCO34_RS03515;Name=CCO34_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03515;old_locus_tag=CCO34_03515 NZ_NPMD01000001.1 Protein Homology CDS 651102 651497 . + 0 ID=cds-WP_023228600.1;Parent=gene-CCO34_RS03515;Dbxref=GenBank:WP_023228600.1;Name=WP_023228600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=CCO34_RS03515;product=lysozyme inhibitor LprI family protein;protein_id=WP_023228600.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 651494 652132 . - . ID=gene-CCO34_RS03520;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=CCO34_RS03520;old_locus_tag=CCO34_03520 NZ_NPMD01000001.1 Protein Homology CDS 651494 652132 . - 0 ID=cds-WP_000083130.1;Parent=gene-CCO34_RS03520;Dbxref=GenBank:WP_000083130.1;Name=WP_000083130.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=CCO34_RS03520;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083130.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 652269 652436 . - . ID=gene-CCO34_RS03525;Name=CCO34_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03525;old_locus_tag=CCO34_03525 NZ_NPMD01000001.1 Protein Homology CDS 652269 652436 . - 0 ID=cds-WP_001273663.1;Parent=gene-CCO34_RS03525;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=CCO34_RS03525;product=general stress protein;protein_id=WP_001273663.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 652821 653417 . + . ID=gene-CCO34_RS03535;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=CCO34_RS03535;old_locus_tag=CCO34_03535 NZ_NPMD01000001.1 Protein Homology CDS 652821 653417 . + 0 ID=cds-WP_001062898.1;Parent=gene-CCO34_RS03535;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=CCO34_RS03535;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 653438 653665 . + . ID=gene-CCO34_RS03540;Name=CCO34_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03540;old_locus_tag=CCO34_03540 NZ_NPMD01000001.1 Protein Homology CDS 653438 653665 . + 0 ID=cds-WP_001143125.1;Parent=gene-CCO34_RS03540;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=CCO34_RS03540;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 653699 654940 . - . ID=gene-CCO34_RS03545;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=CCO34_RS03545;old_locus_tag=CCO34_03545 NZ_NPMD01000001.1 Protein Homology CDS 653699 654940 . - 0 ID=cds-WP_023228599.1;Parent=gene-CCO34_RS03545;Dbxref=GenBank:WP_023228599.1;Name=WP_023228599.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=CCO34_RS03545;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_023228599.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 655073 655579 . - . ID=gene-CCO34_RS03550;Name=CCO34_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03550;old_locus_tag=CCO34_03550 NZ_NPMD01000001.1 Protein Homology CDS 655073 655579 . - 0 ID=cds-WP_000907534.1;Parent=gene-CCO34_RS03550;Dbxref=GenBank:WP_000907534.1;Name=WP_000907534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=CCO34_RS03550;product=protein disulfide oxidoreductase;protein_id=WP_000907534.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 655569 656192 . - . ID=gene-CCO34_RS03555;Name=CCO34_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03555;old_locus_tag=CCO34_03555 NZ_NPMD01000001.1 Protein Homology CDS 655569 656192 . - 0 ID=cds-WP_000876690.1;Parent=gene-CCO34_RS03555;Dbxref=GenBank:WP_000876690.1;Name=WP_000876690.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=CCO34_RS03555;product=DsbA family protein;protein_id=WP_000876690.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 656189 658075 . - . ID=gene-CCO34_RS03560;Name=CCO34_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03560;old_locus_tag=CCO34_03560 NZ_NPMD01000001.1 Protein Homology CDS 656189 658075 . - 0 ID=cds-WP_080181058.1;Parent=gene-CCO34_RS03560;Dbxref=GenBank:WP_080181058.1;Name=WP_080181058.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=CCO34_RS03560;product=protein-disulfide reductase DsbD family protein;protein_id=WP_080181058.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 658124 658486 . - . ID=gene-CCO34_RS03565;Name=CCO34_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03565;old_locus_tag=CCO34_03565 NZ_NPMD01000001.1 Protein Homology CDS 658124 658486 . - 0 ID=cds-WP_001118902.1;Parent=gene-CCO34_RS03565;Dbxref=GenBank:WP_001118902.1;Name=WP_001118902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=CCO34_RS03565;product=copper resistance protein;protein_id=WP_001118902.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 658722 659642 . + . ID=gene-CCO34_RS03575;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=CCO34_RS03575;old_locus_tag=CCO34_03575 NZ_NPMD01000001.1 Protein Homology CDS 658722 659642 . + 0 ID=cds-WP_000420603.1;Parent=gene-CCO34_RS03575;Dbxref=GenBank:WP_000420603.1;Name=WP_000420603.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=CCO34_RS03575;product=curved DNA-binding protein;protein_id=WP_000420603.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 659642 659947 . + . ID=gene-CCO34_RS03580;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=CCO34_RS03580;old_locus_tag=CCO34_03580 NZ_NPMD01000001.1 Protein Homology CDS 659642 659947 . + 0 ID=cds-WP_001284251.1;Parent=gene-CCO34_RS03580;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=CCO34_RS03580;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 660601 660963 . + . ID=gene-CCO34_RS03590;Name=CCO34_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03590;old_locus_tag=CCO34_03590 NZ_NPMD01000001.1 Protein Homology CDS 660601 660963 . + 0 ID=cds-WP_001537781.1;Parent=gene-CCO34_RS03590;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=CCO34_RS03590;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 661371 662309 . - . ID=gene-CCO34_RS03595;Name=CCO34_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03595;old_locus_tag=CCO34_03595 NZ_NPMD01000001.1 Protein Homology CDS 661371 662309 . - 0 ID=cds-WP_000976566.1;Parent=gene-CCO34_RS03595;Dbxref=GenBank:WP_000976566.1;Name=WP_000976566.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=CCO34_RS03595;product=MBL fold metallo-hydrolase;protein_id=WP_000976566.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 662323 663219 . - . ID=gene-CCO34_RS03600;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=CCO34_RS03600;old_locus_tag=CCO34_03600 NZ_NPMD01000001.1 Protein Homology CDS 662323 663219 . - 0 ID=cds-WP_000336602.1;Parent=gene-CCO34_RS03600;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=CCO34_RS03600;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 663229 664605 . - . ID=gene-CCO34_RS03605;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=CCO34_RS03605;old_locus_tag=CCO34_03605 NZ_NPMD01000001.1 Protein Homology CDS 663229 664605 . - 0 ID=cds-WP_001285795.1;Parent=gene-CCO34_RS03605;Dbxref=GenBank:WP_001285795.1;Name=WP_001285795.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=CCO34_RS03605;product=4-hydroxyphenylacetate permease;protein_id=WP_001285795.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 664677 665468 . - . ID=gene-CCO34_RS03610;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=CCO34_RS03610;old_locus_tag=CCO34_03610 NZ_NPMD01000001.1 Protein Homology CDS 664677 665468 . - 0 ID=cds-WP_000785064.1;Parent=gene-CCO34_RS03610;Dbxref=GenBank:WP_000785064.1;Name=WP_000785064.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=CCO34_RS03610;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000785064.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 665479 666282 . - . ID=gene-CCO34_RS03615;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=CCO34_RS03615;old_locus_tag=CCO34_03615 NZ_NPMD01000001.1 Protein Homology CDS 665479 666282 . - 0 ID=cds-WP_000884795.1;Parent=gene-CCO34_RS03615;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=CCO34_RS03615;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 666426 666806 . - . ID=gene-CCO34_RS03620;Name=CCO34_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03620;old_locus_tag=CCO34_03620 NZ_NPMD01000001.1 Protein Homology CDS 666426 666806 . - 0 ID=cds-WP_001119849.1;Parent=gene-CCO34_RS03620;Dbxref=GenBank:WP_001119849.1;Name=WP_001119849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=CCO34_RS03620;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119849.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 666816 667667 . - . ID=gene-CCO34_RS03625;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=CCO34_RS03625;old_locus_tag=CCO34_03625 NZ_NPMD01000001.1 Protein Homology CDS 666816 667667 . - 0 ID=cds-WP_000516978.1;Parent=gene-CCO34_RS03625;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=CCO34_RS03625;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 667669 669135 . - . ID=gene-CCO34_RS03630;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=CCO34_RS03630;old_locus_tag=CCO34_03630 NZ_NPMD01000001.1 Protein Homology CDS 667669 669135 . - 0 ID=cds-WP_000723529.1;Parent=gene-CCO34_RS03630;Dbxref=GenBank:WP_000723529.1;Name=WP_000723529.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=CCO34_RS03630;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723529.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 669132 670421 . - . ID=gene-CCO34_RS03635;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=CCO34_RS03635;old_locus_tag=CCO34_03635 NZ_NPMD01000001.1 Protein Homology CDS 669132 670421 . - 0 ID=cds-WP_000679210.1;Parent=gene-CCO34_RS03635;Dbxref=GenBank:WP_000679210.1;Name=WP_000679210.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=CCO34_RS03635;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679210.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 670696 671136 . + . ID=gene-CCO34_RS03640;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=CCO34_RS03640;old_locus_tag=CCO34_03640 NZ_NPMD01000001.1 Protein Homology CDS 670696 671136 . + 0 ID=cds-WP_000543922.1;Parent=gene-CCO34_RS03640;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=CCO34_RS03640;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 671354 672916 . + . ID=gene-CCO34_RS03645;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=CCO34_RS03645;old_locus_tag=CCO34_03645 NZ_NPMD01000001.1 Protein Homology CDS 671354 672916 . + 0 ID=cds-WP_000801496.1;Parent=gene-CCO34_RS03645;Dbxref=GenBank:WP_000801496.1;Name=WP_000801496.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=CCO34_RS03645;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 672934 673446 . + . ID=gene-CCO34_RS03650;Name=CCO34_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03650;old_locus_tag=CCO34_03650 NZ_NPMD01000001.1 Protein Homology CDS 672934 673446 . + 0 ID=cds-WP_001195556.1;Parent=gene-CCO34_RS03650;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=CCO34_RS03650;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 673779 674189 . - . ID=gene-CCO34_RS03660;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=CCO34_RS03660;old_locus_tag=CCO34_03660 NZ_NPMD01000001.1 Protein Homology CDS 673779 674189 . - 0 ID=cds-WP_000833188.1;Parent=gene-CCO34_RS03660;Dbxref=GenBank:WP_000833188.1;Name=WP_000833188.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=CCO34_RS03660;product=hydroxyisourate hydrolase;protein_id=WP_000833188.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 674325 675005 . + . ID=gene-CCO34_RS03665;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=CCO34_RS03665;old_locus_tag=CCO34_03665 NZ_NPMD01000001.1 Protein Homology CDS 674325 675005 . + 0 ID=cds-WP_000698205.1;Parent=gene-CCO34_RS03665;Dbxref=GenBank:WP_000698205.1;Name=WP_000698205.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=CCO34_RS03665;product=response regulator transcription factor HprR;protein_id=WP_000698205.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 674998 676362 . + . ID=gene-CCO34_RS03670;Name=CCO34_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03670;old_locus_tag=CCO34_03670 NZ_NPMD01000001.1 Protein Homology CDS 674998 676362 . + 0 ID=cds-WP_000240046.1;Parent=gene-CCO34_RS03670;Dbxref=GenBank:WP_000240046.1;Name=WP_000240046.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=CCO34_RS03670;product=heavy metal sensor histidine kinase;protein_id=WP_000240046.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 676535 678004 . + . ID=gene-CCO34_RS03675;Name=CCO34_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03675;old_locus_tag=CCO34_03675 NZ_NPMD01000001.1 Protein Homology CDS 676535 678004 . + 0 ID=cds-WP_000760228.1;Parent=gene-CCO34_RS03675;Dbxref=GenBank:WP_000760228.1;Name=WP_000760228.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=CCO34_RS03675;product=C69 family dipeptidase;protein_id=WP_000760228.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 678113 678223 . + . ID=gene-CCO34_RS03680;Name=CCO34_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03680;old_locus_tag=CCO34_03680 NZ_NPMD01000001.1 Protein Homology CDS 678113 678223 . + 0 ID=cds-WP_000174813.1;Parent=gene-CCO34_RS03680;Dbxref=GenBank:WP_000174813.1;Name=WP_000174813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=CCO34_RS03680;product=hypothetical protein;protein_id=WP_000174813.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 678224 678394 . - . ID=gene-CCO34_RS03685;Name=CCO34_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03685;old_locus_tag=CCO34_03685 NZ_NPMD01000001.1 Protein Homology CDS 678224 678394 . - 0 ID=cds-WP_001111006.1;Parent=gene-CCO34_RS03685;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=CCO34_RS03685;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 678726 680411 . + . ID=gene-CCO34_RS03690;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=CCO34_RS03690;old_locus_tag=CCO34_03690 NZ_NPMD01000001.1 Protein Homology CDS 678726 680411 . + 0 ID=cds-WP_001166946.1;Parent=gene-CCO34_RS03690;Dbxref=GenBank:WP_001166946.1;Name=WP_001166946.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=CCO34_RS03690;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_001166946.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 680428 680769 . + . ID=gene-CCO34_RS03695;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=CCO34_RS03695;old_locus_tag=CCO34_03695 NZ_NPMD01000001.1 Protein Homology CDS 680428 680769 . + 0 ID=cds-WP_000444724.1;Parent=gene-CCO34_RS03695;Dbxref=GenBank:WP_000444724.1;Name=WP_000444724.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=CCO34_RS03695;product=type III secretion system chaperone SigE;protein_id=WP_000444724.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 680779 681099 . - . ID=gene-CCO34_RS03700;Name=CCO34_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03700;old_locus_tag=CCO34_03700 NZ_NPMD01000001.1 Protein Homology CDS 680779 681099 . - 0 ID=cds-WP_010989012.1;Parent=gene-CCO34_RS03700;Dbxref=GenBank:WP_010989012.1;Name=WP_010989012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=CCO34_RS03700;product=membrane protein;protein_id=WP_010989012.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 681317 682192 . + . ID=gene-CCO34_RS03705;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=CCO34_RS03705;old_locus_tag=CCO34_03705 NZ_NPMD01000001.1 Protein Homology CDS 681317 682192 . + 0 ID=cds-WP_001123045.1;Parent=gene-CCO34_RS03705;Dbxref=GenBank:WP_001123045.1;Name=WP_001123045.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=CCO34_RS03705;product=SPI-2 type III secretion system effector PipB;protein_id=WP_001123045.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 682414 683094 . + . ID=gene-CCO34_RS03710;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=CCO34_RS03710;old_locus_tag=CCO34_03710 NZ_NPMD01000001.1 Protein Homology CDS 682414 683094 . + 0 ID=cds-WP_000938191.1;Parent=gene-CCO34_RS03710;Dbxref=GenBank:WP_000938191.1;Name=WP_000938191.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=CCO34_RS03710;product=type III secretion system effector protease PipA;protein_id=WP_000938191.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 683233 683320 . - . ID=gene-CCO34_RS03715;Name=CCO34_RS03715;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS03715;old_locus_tag=CCO34_03715 NZ_NPMD01000001.1 tRNAscan-SE tRNA 683233 683320 . - . ID=rna-CCO34_RS03715;Parent=gene-CCO34_RS03715;anticodon=(pos:complement(683284..683286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS03715;product=tRNA-Ser NZ_NPMD01000001.1 tRNAscan-SE exon 683233 683320 . - . ID=exon-CCO34_RS03715-1;Parent=rna-CCO34_RS03715;anticodon=(pos:complement(683284..683286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS03715;product=tRNA-Ser NZ_NPMD01000001.1 RefSeq gene 683715 684374 . + . ID=gene-CCO34_RS03725;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=CCO34_RS03725;old_locus_tag=CCO34_03725 NZ_NPMD01000001.1 Protein Homology CDS 683715 684374 . + 0 ID=cds-WP_000374046.1;Parent=gene-CCO34_RS03725;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=CCO34_RS03725;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 684461 684790 . + . ID=gene-CCO34_RS03730;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=CCO34_RS03730;old_locus_tag=CCO34_03730 NZ_NPMD01000001.1 Protein Homology CDS 684461 684790 . + 0 ID=cds-WP_000904446.1;Parent=gene-CCO34_RS03730;Dbxref=GenBank:WP_000904446.1;Name=WP_000904446.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=CCO34_RS03730;product=sulfurtransferase TusE;protein_id=WP_000904446.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 684787 685068 . - . ID=gene-CCO34_RS03735;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=CCO34_RS03735;old_locus_tag=CCO34_03735 NZ_NPMD01000001.1 Protein Homology CDS 684787 685068 . - 0 ID=cds-WP_000072884.1;Parent=gene-CCO34_RS03735;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=CCO34_RS03735;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 685117 685896 . - . ID=gene-CCO34_RS03740;Name=CCO34_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03740;old_locus_tag=CCO34_03740 NZ_NPMD01000001.1 Protein Homology CDS 685117 685896 . - 0 ID=cds-WP_000548082.1;Parent=gene-CCO34_RS03740;Dbxref=GenBank:WP_000548082.1;Name=WP_000548082.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=CCO34_RS03740;product=helix-turn-helix transcriptional regulator;protein_id=WP_000548082.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 685922 686470 . - . ID=gene-CCO34_RS03745;Name=CCO34_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03745;old_locus_tag=CCO34_03745 NZ_NPMD01000001.1 Protein Homology CDS 685922 686470 . - 0 ID=cds-WP_000859416.1;Parent=gene-CCO34_RS03745;Dbxref=GenBank:WP_000859416.1;Name=WP_000859416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=CCO34_RS03745;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_000859416.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 686685 687896 . + . ID=gene-CCO34_RS03750;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=CCO34_RS03750;old_locus_tag=CCO34_03750 NZ_NPMD01000001.1 Protein Homology CDS 686685 687896 . + 0 ID=cds-WP_000140480.1;Parent=gene-CCO34_RS03750;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=CCO34_RS03750;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 687954 688271 . + . ID=gene-CCO34_RS03755;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=CCO34_RS03755;old_locus_tag=CCO34_03755 NZ_NPMD01000001.1 Protein Homology CDS 687954 688271 . + 0 ID=cds-WP_000561983.1;Parent=gene-CCO34_RS03755;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=CCO34_RS03755;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 688316 688729 . - . ID=gene-CCO34_RS03760;Name=CCO34_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03760;old_locus_tag=CCO34_03760 NZ_NPMD01000001.1 Protein Homology CDS 688316 688729 . - 0 ID=cds-WP_001537782.1;Parent=gene-CCO34_RS03760;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=CCO34_RS03760;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 688903 689565 . + . ID=gene-CCO34_RS03765;Name=CCO34_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03765;old_locus_tag=CCO34_03765 NZ_NPMD01000001.1 Protein Homology CDS 688903 689565 . + 0 ID=cds-WP_000847719.1;Parent=gene-CCO34_RS03765;Dbxref=GenBank:WP_000847719.1;Name=WP_000847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=CCO34_RS03765;product=DUF2057 family protein;protein_id=WP_000847719.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 689660 690118 . + . ID=gene-CCO34_RS03770;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=CCO34_RS03770;old_locus_tag=CCO34_03770 NZ_NPMD01000001.1 Protein Homology CDS 689660 690118 . + 0 ID=cds-WP_000424187.1;Parent=gene-CCO34_RS03770;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=CCO34_RS03770;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 690154 692208 . - . ID=gene-CCO34_RS03775;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=CCO34_RS03775;old_locus_tag=CCO34_03775 NZ_NPMD01000001.1 Protein Homology CDS 690154 692208 . - 0 ID=cds-WP_000420506.1;Parent=gene-CCO34_RS03775;Dbxref=GenBank:WP_000420506.1;Name=WP_000420506.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=CCO34_RS03775;product=DNA helicase IV;protein_id=WP_000420506.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 692332 692778 . + . ID=gene-CCO34_RS03780;Name=CCO34_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03780;old_locus_tag=CCO34_03780 NZ_NPMD01000001.1 Protein Homology CDS 692332 692778 . + 0 ID=cds-WP_001261222.1;Parent=gene-CCO34_RS03780;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=CCO34_RS03780;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 692797 694950 . + . ID=gene-CCO34_RS03785;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=CCO34_RS03785;old_locus_tag=CCO34_03785 NZ_NPMD01000001.1 Protein Homology CDS 692797 694950 . + 0 ID=cds-WP_000950880.1;Parent=gene-CCO34_RS03785;Dbxref=GenBank:WP_000950880.1;Name=WP_000950880.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=CCO34_RS03785;product=YccS family putative transporter;protein_id=WP_000950880.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 694937 695542 . - . ID=gene-CCO34_RS03790;Name=CCO34_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03790;old_locus_tag=CCO34_03790 NZ_NPMD01000001.1 Protein Homology CDS 694937 695542 . - 0 ID=cds-WP_001202375.1;Parent=gene-CCO34_RS03790;Dbxref=GenBank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=CCO34_RS03790;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 695759 696268 . + . ID=gene-CCO34_RS03795;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=CCO34_RS03795;old_locus_tag=CCO34_03795 NZ_NPMD01000001.1 Protein Homology CDS 695759 696268 . + 0 ID=cds-WP_000288732.1;Parent=gene-CCO34_RS03795;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=CCO34_RS03795;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 696625 697677 . + . ID=gene-CCO34_RS03800;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=CCO34_RS03800;old_locus_tag=CCO34_03800 NZ_NPMD01000001.1 Protein Homology CDS 696625 697677 . + 0 ID=cds-WP_001674965.1;Parent=gene-CCO34_RS03800;Dbxref=GenBank:WP_001674965.1;Name=WP_001674965.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=CCO34_RS03800;product=porin OmpA;protein_id=WP_001674965.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 697749 698201 . - . ID=gene-CCO34_RS03805;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=CCO34_RS03805;old_locus_tag=CCO34_03805 NZ_NPMD01000001.1 Protein Homology CDS 697749 698201 . - 0 ID=cds-WP_000877172.1;Parent=gene-CCO34_RS03805;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=CCO34_RS03805;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 698387 700147 . + . ID=gene-CCO34_RS03810;Name=CCO34_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03810;old_locus_tag=CCO34_03810 NZ_NPMD01000001.1 Protein Homology CDS 698387 700147 . + 0 ID=cds-WP_000156459.1;Parent=gene-CCO34_RS03810;Dbxref=GenBank:WP_000156459.1;Name=WP_000156459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=CCO34_RS03810;product=AAA family ATPase;protein_id=WP_000156459.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 700216 700734 . + . ID=gene-CCO34_RS03815;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=CCO34_RS03815;old_locus_tag=CCO34_03815 NZ_NPMD01000001.1 Protein Homology CDS 700216 700734 . + 0 ID=cds-WP_000227928.1;Parent=gene-CCO34_RS03815;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=CCO34_RS03815;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 700834 701001 . - . ID=gene-CCO34_RS03820;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=CCO34_RS03820;old_locus_tag=CCO34_03820 NZ_NPMD01000001.1 Protein Homology CDS 700834 701001 . - 0 ID=cds-WP_001537784.1;Parent=gene-CCO34_RS03820;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=CCO34_RS03820;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 701257 701820 . - . ID=gene-CCO34_RS03825;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=CCO34_RS03825;old_locus_tag=CCO34_03825 NZ_NPMD01000001.1 Protein Homology CDS 701257 701820 . - 0 ID=cds-WP_000759136.1;Parent=gene-CCO34_RS03825;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=CCO34_RS03825;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 701817 703457 . - . ID=gene-CCO34_RS03830;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=CCO34_RS03830;old_locus_tag=CCO34_03830 NZ_NPMD01000001.1 Protein Homology CDS 701817 703457 . - 0 ID=cds-WP_000433416.1;Parent=gene-CCO34_RS03830;Dbxref=GenBank:WP_000433416.1;Name=WP_000433416.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=CCO34_RS03830;product=intermembrane transport protein PqiB;protein_id=WP_000433416.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 703462 704715 . - . ID=gene-CCO34_RS03835;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=CCO34_RS03835;old_locus_tag=CCO34_03835 NZ_NPMD01000001.1 Protein Homology CDS 703462 704715 . - 0 ID=cds-WP_000333152.1;Parent=gene-CCO34_RS03835;Dbxref=GenBank:WP_000333152.1;Name=WP_000333152.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=CCO34_RS03835;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333152.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 704730 706637 . - . ID=gene-CCO34_RS03840;Name=CCO34_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03840;old_locus_tag=CCO34_03840 NZ_NPMD01000001.1 Protein Homology CDS 704730 706637 . - 0 ID=cds-WP_000053044.1;Parent=gene-CCO34_RS03840;Dbxref=GenBank:WP_000053044.1;Name=WP_000053044.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=CCO34_RS03840;product=ABC transporter ATP-binding protein;protein_id=WP_000053044.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 706650 708758 . - . ID=gene-CCO34_RS03845;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=CCO34_RS03845;old_locus_tag=CCO34_03845 NZ_NPMD01000001.1 Protein Homology CDS 706650 708758 . - 0 ID=cds-WP_001086485.1;Parent=gene-CCO34_RS03845;Dbxref=GenBank:WP_001086485.1;Name=WP_001086485.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=CCO34_RS03845;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086485.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 708857 709966 . + . ID=gene-CCO34_RS03850;Name=CCO34_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03850;old_locus_tag=CCO34_03850 NZ_NPMD01000001.1 Protein Homology CDS 708857 709966 . + 0 ID=cds-WP_000224069.1;Parent=gene-CCO34_RS03850;Dbxref=GenBank:WP_000224069.1;Name=WP_000224069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=CCO34_RS03850;product=YcbX family protein;protein_id=WP_000224069.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 709963 710505 . - . ID=gene-CCO34_RS03855;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=CCO34_RS03855;old_locus_tag=CCO34_03855 NZ_NPMD01000001.1 Protein Homology CDS 709963 710505 . - 0 ID=cds-WP_001220671.1;Parent=gene-CCO34_RS03855;Dbxref=GenBank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=CCO34_RS03855;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 710671 711681 . - . ID=gene-CCO34_RS03860;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=CCO34_RS03860;old_locus_tag=CCO34_03860 NZ_NPMD01000001.1 Protein Homology CDS 710671 711681 . - 0 ID=cds-WP_000291723.1;Parent=gene-CCO34_RS03860;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=CCO34_RS03860;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 711889 714501 . - . ID=gene-CCO34_RS03865;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=CCO34_RS03865;old_locus_tag=CCO34_03865 NZ_NPMD01000001.1 Protein Homology CDS 711889 714501 . - 0 ID=cds-WP_000193784.1;Parent=gene-CCO34_RS03865;Dbxref=GenBank:WP_000193784.1;Name=WP_000193784.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=CCO34_RS03865;product=aminopeptidase N;protein_id=WP_000193784.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 714768 715970 . + . ID=gene-CCO34_RS03870;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=CCO34_RS03870;old_locus_tag=CCO34_03870 NZ_NPMD01000001.1 Protein Homology CDS 714768 715970 . + 0 ID=cds-WP_000191412.1;Parent=gene-CCO34_RS03870;Dbxref=GenBank:WP_000191412.1;Name=WP_000191412.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=CCO34_RS03870;product=nicotinate phosphoribosyltransferase;protein_id=WP_000191412.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 716051 717484 . - . ID=gene-CCO34_RS03875;Name=CCO34_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03875;old_locus_tag=CCO34_03875 NZ_NPMD01000001.1 Protein Homology CDS 716051 717484 . - 0 ID=cds-WP_000893196.1;Parent=gene-CCO34_RS03875;Dbxref=GenBank:WP_000893196.1;Name=WP_000893196.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=CCO34_RS03875;product=alanine/glycine:cation symporter family protein;protein_id=WP_000893196.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 717730 718944 . - . ID=gene-CCO34_RS03880;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=CCO34_RS03880;old_locus_tag=CCO34_03880 NZ_NPMD01000001.1 Protein Homology CDS 717730 718944 . - 0 ID=cds-WP_000544853.1;Parent=gene-CCO34_RS03880;Dbxref=GenBank:WP_000544853.1;Name=WP_000544853.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=CCO34_RS03880;product=diaminopropionate ammonia-lyase;protein_id=WP_000544853.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 719261 719722 . + . ID=gene-CCO34_RS03890;Name=CCO34_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03890;old_locus_tag=CCO34_03890 NZ_NPMD01000001.1 Protein Homology CDS 719261 719722 . + 0 ID=cds-WP_000762342.1;Parent=gene-CCO34_RS03890;Dbxref=GenBank:WP_000762342.1;Name=WP_000762342.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=CCO34_RS03890;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_000762342.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 719923 721323 . + . ID=gene-CCO34_RS03895;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CCO34_RS03895;old_locus_tag=CCO34_03895 NZ_NPMD01000001.1 Protein Homology CDS 719923 721323 . + 0 ID=cds-WP_000117870.1;Parent=gene-CCO34_RS03895;Dbxref=GenBank:WP_000117870.1;Name=WP_000117870.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=CCO34_RS03895;product=asparagine--tRNA ligase;protein_id=WP_000117870.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 721930 723021 . + . ID=gene-CCO34_RS03900;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=CCO34_RS03900;old_locus_tag=CCO34_03900 NZ_NPMD01000001.1 Protein Homology CDS 721930 723021 . + 0 ID=cds-WP_000977710.1;Parent=gene-CCO34_RS03900;Dbxref=GenBank:WP_000977710.1;Name=WP_000977710.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=CCO34_RS03900;product=porin OmpF;protein_id=WP_000977710.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 723206 724396 . + . ID=gene-CCO34_RS03905;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=CCO34_RS03905;old_locus_tag=CCO34_03905 NZ_NPMD01000001.1 Protein Homology CDS 723206 724396 . + 0 ID=cds-WP_000462653.1;Parent=gene-CCO34_RS03905;Dbxref=GenBank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=CCO34_RS03905;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 724458 725105 . - . ID=gene-CCO34_RS03910;Name=CCO34_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03910;old_locus_tag=CCO34_03910 NZ_NPMD01000001.1 Protein Homology CDS 724458 725105 . - 0 ID=cds-WP_080180989.1;Parent=gene-CCO34_RS03910;Dbxref=GenBank:WP_080180989.1;Name=WP_080180989.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=CCO34_RS03910;product=MBL fold metallo-hydrolase;protein_id=WP_080180989.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 725133 725681 . - . ID=gene-CCO34_RS03915;Name=CCO34_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03915;old_locus_tag=CCO34_03915 NZ_NPMD01000001.1 Protein Homology CDS 725133 725681 . - 0 ID=cds-WP_000357052.1;Parent=gene-CCO34_RS03915;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=CCO34_RS03915;product=YcbK family protein;protein_id=WP_000357052.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 725941 727791 . - . ID=gene-CCO34_RS03925;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=CCO34_RS03925;old_locus_tag=CCO34_03925 NZ_NPMD01000001.1 Protein Homology CDS 725941 727791 . - 0 ID=cds-WP_000925892.1;Parent=gene-CCO34_RS03925;Dbxref=GenBank:WP_000925892.1;Name=WP_000925892.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=CCO34_RS03925;product=L%2CD-transpeptidase;protein_id=WP_000925892.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 728136 732602 . - . ID=gene-CCO34_RS03930;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=CCO34_RS03930;old_locus_tag=CCO34_03930 NZ_NPMD01000001.1 Protein Homology CDS 728136 732602 . - 0 ID=cds-WP_000572740.1;Parent=gene-CCO34_RS03930;Dbxref=GenBank:WP_000572740.1;Name=WP_000572740.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=CCO34_RS03930;product=chromosome partition protein MukB;protein_id=WP_000572740.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 732602 733306 . - . ID=gene-CCO34_RS03935;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=CCO34_RS03935;old_locus_tag=CCO34_03935 NZ_NPMD01000001.1 Protein Homology CDS 732602 733306 . - 0 ID=cds-WP_000060025.1;Parent=gene-CCO34_RS03935;Dbxref=GenBank:WP_000060025.1;Name=WP_000060025.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=CCO34_RS03935;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 733287 734609 . - . ID=gene-CCO34_RS03940;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=CCO34_RS03940;old_locus_tag=CCO34_03940 NZ_NPMD01000001.1 Protein Homology CDS 733287 734609 . - 0 ID=cds-WP_001288828.1;Parent=gene-CCO34_RS03940;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=CCO34_RS03940;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 734602 735405 . - . ID=gene-CCO34_RS03945;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=CCO34_RS03945;old_locus_tag=CCO34_03945 NZ_NPMD01000001.1 Protein Homology CDS 734602 735405 . - 0 ID=cds-WP_001154025.1;Parent=gene-CCO34_RS03945;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=CCO34_RS03945;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 735541 736317 . + . ID=gene-CCO34_RS03950;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=CCO34_RS03950;old_locus_tag=CCO34_03950 NZ_NPMD01000001.1 Protein Homology CDS 735541 736317 . + 0 ID=cds-WP_000899563.1;Parent=gene-CCO34_RS03950;Dbxref=GenBank:WP_000899563.1;Name=WP_000899563.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=CCO34_RS03950;product=envelope biogenesis factor ElyC;protein_id=WP_000899563.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 736297 737190 . - . ID=gene-CCO34_RS03955;Name=CCO34_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03955;old_locus_tag=CCO34_03955 NZ_NPMD01000001.1 Protein Homology CDS 736297 737190 . - 0 ID=cds-WP_000436887.1;Parent=gene-CCO34_RS03955;Dbxref=GenBank:WP_000436887.1;Name=WP_000436887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=CCO34_RS03955;product=YcbJ family phosphotransferase;protein_id=WP_000436887.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 737401 738147 . - . ID=gene-CCO34_RS03960;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=CCO34_RS03960;old_locus_tag=CCO34_03960 NZ_NPMD01000001.1 Protein Homology CDS 737401 738147 . - 0 ID=cds-WP_000011576.1;Parent=gene-CCO34_RS03960;Dbxref=GenBank:WP_000011576.1;Name=WP_000011576.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=CCO34_RS03960;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011576.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 738144 738326 . - . ID=gene-CCO34_RS03965;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=CCO34_RS03965;old_locus_tag=CCO34_03965 NZ_NPMD01000001.1 Protein Homology CDS 738144 738326 . - 0 ID=cds-WP_000350061.1;Parent=gene-CCO34_RS03965;Dbxref=GenBank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=CCO34_RS03965;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 738378 739610 . - . ID=gene-CCO34_RS03970;Name=CCO34_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03970;old_locus_tag=CCO34_03970 NZ_NPMD01000001.1 Protein Homology CDS 738378 739610 . - 0 ID=cds-WP_000056931.1;Parent=gene-CCO34_RS03970;Dbxref=GenBank:WP_000056931.1;Name=WP_000056931.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=CCO34_RS03970;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000056931.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 739654 740631 . - . ID=gene-CCO34_RS03975;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=CCO34_RS03975;old_locus_tag=CCO34_03975 NZ_NPMD01000001.1 Protein Homology CDS 739654 740631 . - 0 ID=cds-WP_000561697.1;Parent=gene-CCO34_RS03975;Dbxref=GenBank:WP_000561697.1;Name=WP_000561697.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=CCO34_RS03975;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000561697.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 740628 742376 . - . ID=gene-CCO34_RS03980;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=CCO34_RS03980;old_locus_tag=CCO34_03980 NZ_NPMD01000001.1 Protein Homology CDS 740628 742376 . - 0 ID=cds-WP_000551246.1;Parent=gene-CCO34_RS03980;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=CCO34_RS03980;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 742413 744677 . - . ID=gene-CCO34_RS03985;Name=CCO34_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS03985;old_locus_tag=CCO34_03985 NZ_NPMD01000001.1 Protein Homology CDS 742413 744677 . - 0 ID=cds-WP_000705792.1;Parent=gene-CCO34_RS03985;Dbxref=GenBank:WP_000705792.1;Name=WP_000705792.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=CCO34_RS03985;product=ComEC family protein;protein_id=WP_000705792.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 744907 745191 . - . ID=gene-CCO34_RS03990;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=CCO34_RS03990;old_locus_tag=CCO34_03990 NZ_NPMD01000001.1 Protein Homology CDS 744907 745191 . - 0 ID=cds-WP_000167332.1;Parent=gene-CCO34_RS03990;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=CCO34_RS03990;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 745347 747020 . - . ID=gene-CCO34_RS03995;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CCO34_RS03995;old_locus_tag=CCO34_03995 NZ_NPMD01000001.1 Protein Homology CDS 745347 747020 . - 0 ID=cds-WP_000140324.1;Parent=gene-CCO34_RS03995;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=CCO34_RS03995;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 747134 747817 . - . ID=gene-CCO34_RS04000;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CCO34_RS04000;old_locus_tag=CCO34_04000 NZ_NPMD01000001.1 Protein Homology CDS 747134 747817 . - 0 ID=cds-WP_000125007.1;Parent=gene-CCO34_RS04000;Dbxref=GenBank:WP_000125007.1;Name=WP_000125007.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=CCO34_RS04000;product=(d)CMP kinase;protein_id=WP_000125007.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 747990 748751 . - . ID=gene-CCO34_RS04005;Name=CCO34_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04005;old_locus_tag=CCO34_04005 NZ_NPMD01000001.1 Protein Homology CDS 747990 748751 . - 0 ID=cds-WP_000792301.1;Parent=gene-CCO34_RS04005;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=CCO34_RS04005;product=M48 family metallopeptidase;protein_id=WP_000792301.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 748894 750177 . - . ID=gene-CCO34_RS04010;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CCO34_RS04010;old_locus_tag=CCO34_04010 NZ_NPMD01000001.1 Protein Homology CDS 748894 750177 . - 0 ID=cds-WP_000445191.1;Parent=gene-CCO34_RS04010;Dbxref=GenBank:WP_000445191.1;Name=WP_000445191.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=CCO34_RS04010;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445191.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 750248 751336 . - . ID=gene-CCO34_RS04015;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=CCO34_RS04015;old_locus_tag=CCO34_04015 NZ_NPMD01000001.1 Protein Homology CDS 750248 751336 . - 0 ID=cds-WP_000079590.1;Parent=gene-CCO34_RS04015;Dbxref=GenBank:WP_000079590.1;Name=WP_000079590.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=CCO34_RS04015;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000079590.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 751522 752214 . - . ID=gene-CCO34_RS04020;Name=CCO34_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04020;old_locus_tag=CCO34_04020 NZ_NPMD01000001.1 Protein Homology CDS 751522 752214 . - 0 ID=cds-WP_000642866.1;Parent=gene-CCO34_RS04020;Dbxref=GenBank:WP_000642866.1;Name=WP_000642866.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=CCO34_RS04020;product=DUF421 domain-containing protein;protein_id=WP_000642866.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 752351 754111 . + . ID=gene-CCO34_RS04025;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=CCO34_RS04025;old_locus_tag=CCO34_04025 NZ_NPMD01000001.1 Protein Homology CDS 752351 754111 . + 0 ID=cds-WP_000194822.1;Parent=gene-CCO34_RS04025;Dbxref=GenBank:WP_000194822.1;Name=WP_000194822.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=CCO34_RS04025;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_000194822.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 754517 755374 . + . ID=gene-CCO34_RS04030;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=CCO34_RS04030;old_locus_tag=CCO34_04030 NZ_NPMD01000001.1 Protein Homology CDS 754517 755374 . + 0 ID=cds-WP_000642539.1;Parent=gene-CCO34_RS04030;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=CCO34_RS04030;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 755434 757716 . + . ID=gene-CCO34_RS04035;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO34_RS04035;old_locus_tag=CCO34_04035 NZ_NPMD01000001.1 Protein Homology CDS 755434 757716 . + 0 ID=cds-WP_001292799.1;Parent=gene-CCO34_RS04035;Dbxref=GenBank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=CCO34_RS04035;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 757792 758751 . - . ID=gene-CCO34_RS04040;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=CCO34_RS04040;old_locus_tag=CCO34_04040 NZ_NPMD01000001.1 Protein Homology CDS 757792 758751 . - 0 ID=cds-WP_001145559.1;Parent=gene-CCO34_RS04040;Dbxref=GenBank:WP_001145559.1;Name=WP_001145559.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=CCO34_RS04040;product=SPI-2 type III secretion system effector SopD2;protein_id=WP_001145559.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 758882 759208 . + . ID=gene-CCO34_RS04045;Name=CCO34_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04045;old_locus_tag=CCO34_04045 NZ_NPMD01000001.1 Protein Homology CDS 758882 759208 . + 0 ID=cds-WP_010989001.1;Parent=gene-CCO34_RS04045;Dbxref=GenBank:WP_010989001.1;Name=WP_010989001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=CCO34_RS04045;product=hypothetical protein;protein_id=WP_010989001.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 759327 760124 . + . ID=gene-CCO34_RS04050;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CCO34_RS04050;old_locus_tag=CCO34_04050 NZ_NPMD01000001.1 Protein Homology CDS 759327 760124 . + 0 ID=cds-WP_000067928.1;Parent=gene-CCO34_RS04050;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=CCO34_RS04050;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 760425 761846 . - . ID=gene-CCO34_RS04055;Name=CCO34_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04055;old_locus_tag=CCO34_04055 NZ_NPMD01000001.1 Protein Homology CDS 760425 761846 . - 0 ID=cds-WP_001134264.1;Parent=gene-CCO34_RS04055;Dbxref=GenBank:WP_001134264.1;Name=WP_001134264.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=CCO34_RS04055;product=APC family permease;protein_id=WP_001134264.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 762064 763212 . - . ID=gene-CCO34_RS04060;Name=CCO34_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04060;old_locus_tag=CCO34_04060 NZ_NPMD01000001.1 Protein Homology CDS 762064 763212 . - 0 ID=cds-WP_000109274.1;Parent=gene-CCO34_RS04060;Dbxref=GenBank:WP_000109274.1;Name=WP_000109274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=CCO34_RS04060;product=MFS transporter;protein_id=WP_000109274.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 763562 764425 . - . ID=gene-CCO34_RS04065;Name=CCO34_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04065;old_locus_tag=CCO34_04065 NZ_NPMD01000001.1 Protein Homology CDS 763562 764425 . - 0 ID=cds-WP_000534681.1;Parent=gene-CCO34_RS04065;Dbxref=GenBank:WP_000534681.1;Name=WP_000534681.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=CCO34_RS04065;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534681.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 764427 765044 . - . ID=gene-CCO34_RS04070;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=CCO34_RS04070;old_locus_tag=CCO34_04070 NZ_NPMD01000001.1 Protein Homology CDS 764427 765044 . - 0 ID=cds-WP_000213069.1-2;Parent=gene-CCO34_RS04070;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO34_RS04070;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 765055 767499 . - . ID=gene-CCO34_RS04075;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=CCO34_RS04075;old_locus_tag=CCO34_04075 NZ_NPMD01000001.1 Protein Homology CDS 765055 767499 . - 0 ID=cds-WP_000850250.1;Parent=gene-CCO34_RS04075;Dbxref=GenBank:WP_000850250.1;Name=WP_000850250.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=CCO34_RS04075;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850250.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 767736 769028 . - . ID=gene-CCO34_RS04080;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CCO34_RS04080;old_locus_tag=CCO34_04080 NZ_NPMD01000001.1 Protein Homology CDS 767736 769028 . - 0 ID=cds-WP_000886697.1;Parent=gene-CCO34_RS04080;Dbxref=GenBank:WP_000886697.1;Name=WP_000886697.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=CCO34_RS04080;product=serine--tRNA ligase;protein_id=WP_000886697.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 769287 770630 . - . ID=gene-CCO34_RS04085;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=CCO34_RS04085;old_locus_tag=CCO34_04085 NZ_NPMD01000001.1 Protein Homology CDS 769287 770630 . - 0 ID=cds-WP_000067785.1;Parent=gene-CCO34_RS04085;Dbxref=GenBank:WP_000067785.1;Name=WP_000067785.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=CCO34_RS04085;product=replication-associated recombination protein RarA;protein_id=WP_000067785.1;transl_table=11 NZ_NPMD01000001.1 RefSeq gene 770640 771251 . - . ID=gene-CCO34_RS04090;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=CCO34_RS04090;old_locus_tag=CCO34_04090 NZ_NPMD01000001.1 Protein Homology CDS 770640 771251 . - 0 ID=cds-WP_001519746.1;Parent=gene-CCO34_RS04090;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=CCO34_RS04090;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001519746.1;transl_table=11 NZ_NPMD01000001.1 RefSeq pseudogene 771394 773191 . - . ID=gene-CCO34_RS04095;Name=ftsK;end_range=773191,.;gbkey=Gene;gene=ftsK;gene_biotype=pseudogene;locus_tag=CCO34_RS04095;old_locus_tag=CCO34_04095;partial=true;pseudo=true NZ_NPMD01000001.1 Protein Homology CDS 771394 773191 . - 1 ID=cds-CCO34_RS04095;Parent=gene-CCO34_RS04095;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=773191,.;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=CCO34_RS04095;partial=true;product=DNA translocase FtsK;pseudo=true;transl_table=11 ##sequence-region NZ_NPMD01000010.1 1 145670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000010.1 RefSeq region 1 145670 . + . ID=NZ_NPMD01000010.1:1..145670;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000010.1 RefSeq gene 429 1280 . - . ID=gene-CCO34_RS20090;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=CCO34_RS20090;old_locus_tag=CCO34_20085 NZ_NPMD01000010.1 Protein Homology CDS 429 1280 . - 0 ID=cds-WP_000201806.1;Parent=gene-CCO34_RS20090;Dbxref=GenBank:WP_000201806.1;Name=WP_000201806.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=CCO34_RS20090;product=glutamate racemase;protein_id=WP_000201806.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 1225 3069 . - . ID=gene-CCO34_RS20095;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=CCO34_RS20095;old_locus_tag=CCO34_20090 NZ_NPMD01000010.1 Protein Homology CDS 1225 3069 . - 0 ID=cds-WP_000591403.1;Parent=gene-CCO34_RS20095;Dbxref=GenBank:WP_000591403.1;Name=WP_000591403.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=CCO34_RS20095;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591403.1;transl_table=11 NZ_NPMD01000010.1 cmsearch riboswitch 3136 3328 . - . ID=id-NZ_NPMD01000010.1:3136..3328;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMD01000010.1 RefSeq gene 3443 4543 . + . ID=gene-CCO34_RS20100;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=CCO34_RS20100;old_locus_tag=CCO34_20095 NZ_NPMD01000010.1 Protein Homology CDS 3443 4543 . + 0 ID=cds-WP_000186980.1;Parent=gene-CCO34_RS20100;Dbxref=GenBank:WP_000186980.1;Name=WP_000186980.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=CCO34_RS20100;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000186980.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 4590 4949 . - . ID=gene-CCO34_RS20105;Name=CCO34_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20105;old_locus_tag=CCO34_20100 NZ_NPMD01000010.1 Protein Homology CDS 4590 4949 . - 0 ID=cds-WP_000813838.1;Parent=gene-CCO34_RS20105;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=CCO34_RS20105;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 4965 5600 . - . ID=gene-CCO34_RS20110;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=CCO34_RS20110;old_locus_tag=CCO34_20105 NZ_NPMD01000010.1 Protein Homology CDS 4965 5600 . - 0 ID=cds-WP_000971958.1;Parent=gene-CCO34_RS20110;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=CCO34_RS20110;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 5799 7199 . + . ID=gene-CCO34_RS20120;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO34_RS20120;old_locus_tag=CCO34_20115 NZ_NPMD01000010.1 Protein Homology CDS 5799 7199 . + 0 ID=cds-WP_001120791.1;Parent=gene-CCO34_RS20120;Dbxref=GenBank:WP_001120791.1;Name=WP_001120791.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=CCO34_RS20120;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120791.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 7182 8099 . - . ID=gene-CCO34_RS20125;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=CCO34_RS20125;old_locus_tag=CCO34_20120 NZ_NPMD01000010.1 Protein Homology CDS 7182 8099 . - 0 ID=cds-WP_001025919.1;Parent=gene-CCO34_RS20125;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=CCO34_RS20125;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 8383 9759 . - . ID=gene-CCO34_RS20135;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CCO34_RS20135;old_locus_tag=CCO34_20130 NZ_NPMD01000010.1 Protein Homology CDS 8383 9759 . - 0 ID=cds-WP_001230049.1;Parent=gene-CCO34_RS20135;Dbxref=GenBank:WP_001230049.1;Name=WP_001230049.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=CCO34_RS20135;product=argininosuccinate lyase;protein_id=WP_001230049.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 9877 10653 . - . ID=gene-CCO34_RS20140;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=CCO34_RS20140;old_locus_tag=CCO34_20135 NZ_NPMD01000010.1 Protein Homology CDS 9877 10653 . - 0 ID=cds-WP_001575262.1;Parent=gene-CCO34_RS20140;Dbxref=GenBank:WP_001575262.1;Name=WP_001575262.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=CCO34_RS20140;product=acetylglutamate kinase;protein_id=WP_001575262.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 10661 11665 . - . ID=gene-CCO34_RS20145;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=CCO34_RS20145;old_locus_tag=CCO34_20140 NZ_NPMD01000010.1 Protein Homology CDS 10661 11665 . - 0 ID=cds-WP_000935339.1;Parent=gene-CCO34_RS20145;Dbxref=GenBank:WP_000935339.1;Name=WP_000935339.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=CCO34_RS20145;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935339.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 11754 12905 . + . ID=gene-CCO34_RS20150;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=CCO34_RS20150;old_locus_tag=CCO34_20145 NZ_NPMD01000010.1 Protein Homology CDS 11754 12905 . + 0 ID=cds-WP_000800208.1;Parent=gene-CCO34_RS20150;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=CCO34_RS20150;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 13274 15925 . + . ID=gene-CCO34_RS20160;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=CCO34_RS20160;old_locus_tag=CCO34_20150 NZ_NPMD01000010.1 Protein Homology CDS 13274 15925 . + 0 ID=cds-WP_001005548.1;Parent=gene-CCO34_RS20160;Dbxref=GenBank:WP_001005548.1;Name=WP_001005548.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=CCO34_RS20160;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005548.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 16136 17869 . + . ID=gene-CCO34_RS20165;Name=CCO34_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20165;old_locus_tag=CCO34_20155 NZ_NPMD01000010.1 Protein Homology CDS 16136 17869 . + 0 ID=cds-WP_001192092.1;Parent=gene-CCO34_RS20165;Dbxref=GenBank:WP_001192092.1;Name=WP_001192092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=CCO34_RS20165;product=phosphoethanolamine transferase CptA;protein_id=WP_001192092.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 18030 18881 . + . ID=gene-CCO34_RS20170;Name=CCO34_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20170;old_locus_tag=CCO34_20160 NZ_NPMD01000010.1 Protein Homology CDS 18030 18881 . + 0 ID=cds-WP_000274596.1;Parent=gene-CCO34_RS20170;Dbxref=GenBank:WP_000274596.1;Name=WP_000274596.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=CCO34_RS20170;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274596.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 18868 19221 . - . ID=gene-CCO34_RS20175;Name=CCO34_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20175;old_locus_tag=CCO34_20165 NZ_NPMD01000010.1 Protein Homology CDS 18868 19221 . - 0 ID=cds-WP_000290522.1;Parent=gene-CCO34_RS20175;Dbxref=GenBank:WP_000290522.1;Name=WP_000290522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462996.1;locus_tag=CCO34_RS20175;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000290522.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 19223 20101 . - . ID=gene-CCO34_RS20180;Name=CCO34_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20180;old_locus_tag=CCO34_20170 NZ_NPMD01000010.1 Protein Homology CDS 19223 20101 . - 0 ID=cds-WP_000171724.1;Parent=gene-CCO34_RS20180;Dbxref=GenBank:WP_000171724.1;Name=WP_000171724.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=CCO34_RS20180;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000171724.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 20067 22364 . - . ID=gene-CCO34_RS20185;Name=CCO34_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20185;old_locus_tag=CCO34_20175 NZ_NPMD01000010.1 Protein Homology CDS 20067 22364 . - 0 ID=cds-WP_000149707.1;Parent=gene-CCO34_RS20185;Dbxref=GenBank:WP_000149707.1;Name=WP_000149707.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462994.1;locus_tag=CCO34_RS20185;product=formate C-acetyltransferase;protein_id=WP_000149707.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 22463 22783 . - . ID=gene-CCO34_RS20190;Name=CCO34_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20190;old_locus_tag=CCO34_20180 NZ_NPMD01000010.1 Protein Homology CDS 22463 22783 . - 0 ID=cds-WP_000161258.1;Parent=gene-CCO34_RS20190;Dbxref=GenBank:WP_000161258.1;Name=WP_000161258.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=CCO34_RS20190;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161258.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 22798 23877 . - . ID=gene-CCO34_RS20195;Name=CCO34_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20195;old_locus_tag=CCO34_20185 NZ_NPMD01000010.1 Protein Homology CDS 22798 23877 . - 0 ID=cds-WP_000661597.1;Parent=gene-CCO34_RS20195;Dbxref=GenBank:WP_000661597.1;Name=WP_000661597.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=CCO34_RS20195;product=PTS fructose transporter subunit EIIC;protein_id=WP_000661597.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 24186 26687 . + . ID=gene-CCO34_RS20200;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CCO34_RS20200;old_locus_tag=CCO34_20190 NZ_NPMD01000010.1 Protein Homology CDS 24186 26687 . + 0 ID=cds-WP_001128489.1;Parent=gene-CCO34_RS20200;Dbxref=GenBank:WP_001128489.1;Name=WP_001128489.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462991.1;locus_tag=CCO34_RS20200;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001128489.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 26698 27360 . + . ID=gene-CCO34_RS20205;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=CCO34_RS20205;old_locus_tag=CCO34_20195 NZ_NPMD01000010.1 Protein Homology CDS 26698 27360 . + 0 ID=cds-WP_000424866.1;Parent=gene-CCO34_RS20205;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=CCO34_RS20205;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 27372 28475 . + . ID=gene-CCO34_RS20210;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=CCO34_RS20210;old_locus_tag=CCO34_20200 NZ_NPMD01000010.1 Protein Homology CDS 27372 28475 . + 0 ID=cds-WP_000374031.1;Parent=gene-CCO34_RS20210;Dbxref=GenBank:WP_000374031.1;Name=WP_000374031.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=CCO34_RS20210;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374031.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 28734 29357 . + . ID=gene-CCO34_RS20215;Name=CCO34_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20215;old_locus_tag=CCO34_20205 NZ_NPMD01000010.1 Protein Homology CDS 28734 29357 . + 0 ID=cds-WP_000666688.1;Parent=gene-CCO34_RS20215;Dbxref=GenBank:WP_000666688.1;Name=WP_000666688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=CCO34_RS20215;product=DUF1287 domain-containing protein;protein_id=WP_000666688.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 29415 31595 . - . ID=gene-CCO34_RS20220;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=CCO34_RS20220;old_locus_tag=CCO34_20210 NZ_NPMD01000010.1 Protein Homology CDS 29415 31595 . - 0 ID=cds-WP_000108104.1;Parent=gene-CCO34_RS20220;Dbxref=GenBank:WP_000108104.1;Name=WP_000108104.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=CCO34_RS20220;product=catalase/peroxidase HPI;protein_id=WP_000108104.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 31760 32650 . - . ID=gene-CCO34_RS20225;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=CCO34_RS20225;old_locus_tag=CCO34_20215 NZ_NPMD01000010.1 Protein Homology CDS 31760 32650 . - 0 ID=cds-WP_000007507.1;Parent=gene-CCO34_RS20225;Dbxref=GenBank:WP_000007507.1;Name=WP_000007507.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=CCO34_RS20225;product=methylenetetrahydrofolate reductase;protein_id=WP_000007507.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 32845 34401 . - . ID=gene-CCO34_RS20230;Name=CCO34_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20230;old_locus_tag=CCO34_20220 NZ_NPMD01000010.1 Protein Homology CDS 32845 34401 . - 0 ID=cds-WP_000865260.1;Parent=gene-CCO34_RS20230;Dbxref=GenBank:WP_000865260.1;Name=WP_000865260.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=CCO34_RS20230;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000865260.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 34537 35661 . + . ID=gene-CCO34_RS20235;Name=CCO34_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20235;old_locus_tag=CCO34_20225 NZ_NPMD01000010.1 Protein Homology CDS 34537 35661 . + 0 ID=cds-WP_001134808.1;Parent=gene-CCO34_RS20235;Dbxref=GenBank:WP_001134808.1;Name=WP_001134808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=CCO34_RS20235;product=hypothetical protein;protein_id=WP_001134808.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 35896 36894 . + . ID=gene-CCO34_RS20240;Name=CCO34_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20240;old_locus_tag=CCO34_20230 NZ_NPMD01000010.1 Protein Homology CDS 35896 36894 . + 0 ID=cds-WP_000406821.1;Parent=gene-CCO34_RS20240;Dbxref=GenBank:WP_000406821.1;Name=WP_000406821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=CCO34_RS20240;product=hypothetical protein;protein_id=WP_000406821.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 36897 37754 . + . ID=gene-CCO34_RS20245;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=CCO34_RS20245;old_locus_tag=CCO34_20235 NZ_NPMD01000010.1 Protein Homology CDS 36897 37754 . + 0 ID=cds-WP_000398251.1;Parent=gene-CCO34_RS20245;Dbxref=GenBank:WP_000398251.1;Name=WP_000398251.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=CCO34_RS20245;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398251.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 37870 40302 . - . ID=gene-CCO34_RS20250;Name=CCO34_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20250;old_locus_tag=CCO34_20240 NZ_NPMD01000010.1 Protein Homology CDS 37870 40302 . - 0 ID=cds-WP_000110823.1;Parent=gene-CCO34_RS20250;Dbxref=GenBank:WP_000110823.1;Name=WP_000110823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=CCO34_RS20250;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110823.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 40305 41465 . - . ID=gene-CCO34_RS20255;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=CCO34_RS20255;old_locus_tag=CCO34_20245 NZ_NPMD01000010.1 Protein Homology CDS 40305 41465 . - 0 ID=cds-WP_000197223.1;Parent=gene-CCO34_RS20255;Dbxref=GenBank:WP_000197223.1;Name=WP_000197223.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=CCO34_RS20255;product=cystathionine gamma-synthase;protein_id=WP_000197223.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 41730 42047 . + . ID=gene-CCO34_RS20260;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=CCO34_RS20260;old_locus_tag=CCO34_20250 NZ_NPMD01000010.1 Protein Homology CDS 41730 42047 . + 0 ID=cds-WP_000852811.1;Parent=gene-CCO34_RS20260;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=CCO34_RS20260;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 42503 44293 . + . ID=gene-CCO34_RS20265;Name=CCO34_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20265;old_locus_tag=CCO34_20255 NZ_NPMD01000010.1 Protein Homology CDS 42503 44293 . + 0 ID=cds-WP_000899644.1;Parent=gene-CCO34_RS20265;Dbxref=GenBank:WP_000899644.1;Name=WP_000899644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=CCO34_RS20265;product=aryl-sulfate sulfotransferase;protein_id=WP_000899644.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 44494 45156 . + . ID=gene-CCO34_RS20270;Name=CCO34_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20270;old_locus_tag=CCO34_20260 NZ_NPMD01000010.1 Protein Homology CDS 44494 45156 . + 0 ID=cds-WP_000792803.1;Parent=gene-CCO34_RS20270;Dbxref=GenBank:WP_000792803.1;Name=WP_000792803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=CCO34_RS20270;product=TIGR02117 family protein;protein_id=WP_000792803.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 45202 45414 . - . ID=gene-CCO34_RS20275;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=CCO34_RS20275;old_locus_tag=CCO34_20265 NZ_NPMD01000010.1 Protein Homology CDS 45202 45414 . - 0 ID=cds-WP_000715284.1;Parent=gene-CCO34_RS20275;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=CCO34_RS20275;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 45618 47816 . + . ID=gene-CCO34_RS20280;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CCO34_RS20280;old_locus_tag=CCO34_20270 NZ_NPMD01000010.1 Protein Homology CDS 45618 47816 . + 0 ID=cds-WP_000109406.1;Parent=gene-CCO34_RS20280;Dbxref=GenBank:WP_000109406.1;Name=WP_000109406.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=CCO34_RS20280;product=primosomal protein N';protein_id=WP_000109406.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 47971 48996 . + . ID=gene-CCO34_RS20285;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=CCO34_RS20285;old_locus_tag=CCO34_20275 NZ_NPMD01000010.1 Protein Homology CDS 47971 48996 . + 0 ID=cds-WP_000841337.1;Parent=gene-CCO34_RS20285;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=CCO34_RS20285;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 49090 50070 . + . ID=gene-CCO34_RS20290;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=CCO34_RS20290;old_locus_tag=CCO34_20280 NZ_NPMD01000010.1 Protein Homology CDS 49090 50070 . + 0 ID=cds-WP_000068807.1;Parent=gene-CCO34_RS20290;Dbxref=GenBank:WP_000068807.1;Name=WP_000068807.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=CCO34_RS20290;product=cell division protein FtsN;protein_id=WP_000068807.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 50162 50692 . + . ID=gene-CCO34_RS20295;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CCO34_RS20295;old_locus_tag=CCO34_20285 NZ_NPMD01000010.1 Protein Homology CDS 50162 50692 . + 0 ID=cds-WP_000208240.1;Parent=gene-CCO34_RS20295;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=CCO34_RS20295;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 50702 52033 . + . ID=gene-CCO34_RS20300;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CCO34_RS20300;old_locus_tag=CCO34_20290 NZ_NPMD01000010.1 Protein Homology CDS 50702 52033 . + 0 ID=cds-WP_001293360.1;Parent=gene-CCO34_RS20300;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=CCO34_RS20300;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293360.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 52100 53029 . + . ID=gene-CCO34_RS20305;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=CCO34_RS20305;old_locus_tag=CCO34_20295 NZ_NPMD01000010.1 Protein Homology CDS 52100 53029 . + 0 ID=cds-WP_000139639.1;Parent=gene-CCO34_RS20305;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=CCO34_RS20305;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 53122 53607 . + . ID=gene-CCO34_RS20310;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=CCO34_RS20310;old_locus_tag=CCO34_20300 NZ_NPMD01000010.1 Protein Homology CDS 53122 53607 . + 0 ID=cds-WP_000872918.1;Parent=gene-CCO34_RS20310;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=CCO34_RS20310;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 53829 54068 . - . ID=gene-CCO34_RS20315;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=CCO34_RS20315;old_locus_tag=CCO34_20305 NZ_NPMD01000010.1 Protein Homology CDS 53829 54068 . - 0 ID=cds-WP_000051370.1;Parent=gene-CCO34_RS20315;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=CCO34_RS20315;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 54467 55312 . + . ID=gene-CCO34_RS20320;Name=CCO34_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20320;old_locus_tag=CCO34_20310 NZ_NPMD01000010.1 Protein Homology CDS 54467 55312 . + 0 ID=cds-WP_000084285.1;Parent=gene-CCO34_RS20320;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=CCO34_RS20320;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 55333 56841 . + . ID=gene-CCO34_RS20325;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CCO34_RS20325;old_locus_tag=CCO34_20315 NZ_NPMD01000010.1 Protein Homology CDS 55333 56841 . + 0 ID=cds-WP_000136808.1;Parent=gene-CCO34_RS20325;Dbxref=GenBank:WP_000136808.1;Name=WP_000136808.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=CCO34_RS20325;product=glycerol kinase GlpK;protein_id=WP_000136808.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 56953 57963 . + . ID=gene-CCO34_RS20330;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=CCO34_RS20330;old_locus_tag=CCO34_20320 NZ_NPMD01000010.1 Protein Homology CDS 56953 57963 . + 0 ID=cds-WP_001250624.1;Parent=gene-CCO34_RS20330;Dbxref=GenBank:WP_001250624.1;Name=WP_001250624.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=CCO34_RS20330;product=class II fructose-bisphosphatase;protein_id=WP_001250624.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 58060 58806 . + . ID=gene-CCO34_RS20335;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=CCO34_RS20335;old_locus_tag=CCO34_20325 NZ_NPMD01000010.1 Protein Homology CDS 58060 58806 . + 0 ID=cds-WP_000796303.1;Parent=gene-CCO34_RS20335;Dbxref=GenBank:WP_000796303.1;Name=WP_000796303.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=CCO34_RS20335;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796303.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 58913 59341 . - . ID=gene-CCO34_RS20340;Name=CCO34_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20340;old_locus_tag=CCO34_20330 NZ_NPMD01000010.1 Protein Homology CDS 58913 59341 . - 0 ID=cds-WP_000155237.1;Parent=gene-CCO34_RS20340;Dbxref=GenBank:WP_000155237.1;Name=WP_000155237.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=CCO34_RS20340;product=DUF805 domain-containing protein;protein_id=WP_000155237.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 59442 60038 . + . ID=gene-CCO34_RS20345;Name=CCO34_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20345;old_locus_tag=CCO34_20335 NZ_NPMD01000010.1 Protein Homology CDS 59442 60038 . + 0 ID=cds-WP_000802242.1;Parent=gene-CCO34_RS20345;Dbxref=GenBank:WP_000802242.1;Name=WP_000802242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=CCO34_RS20345;product=YiiQ family protein;protein_id=WP_000802242.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 60151 60918 . + . ID=gene-CCO34_RS20350;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CCO34_RS20350;old_locus_tag=CCO34_20340 NZ_NPMD01000010.1 Protein Homology CDS 60151 60918 . + 0 ID=cds-WP_001216339.1;Parent=gene-CCO34_RS20350;Dbxref=GenBank:WP_001216339.1;Name=WP_001216339.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=CCO34_RS20350;product=triose-phosphate isomerase;protein_id=WP_001216339.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 61010 61774 . - . ID=gene-CCO34_RS20355;Name=CCO34_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20355;old_locus_tag=CCO34_20345 NZ_NPMD01000010.1 Protein Homology CDS 61010 61774 . - 0 ID=cds-WP_001088046.1;Parent=gene-CCO34_RS20355;Dbxref=GenBank:WP_001088046.1;Name=WP_001088046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=CCO34_RS20355;product=epimerase;protein_id=WP_001088046.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 61784 62074 . - . ID=gene-CCO34_RS20360;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=CCO34_RS20360;old_locus_tag=CCO34_20350 NZ_NPMD01000010.1 Protein Homology CDS 61784 62074 . - 0 ID=cds-WP_023243535.1;Parent=gene-CCO34_RS20360;Dbxref=GenBank:WP_023243535.1;Name=WP_023243535.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=CCO34_RS20360;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_023243535.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 62157 63032 . - . ID=gene-CCO34_RS20365;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=CCO34_RS20365;old_locus_tag=CCO34_20355 NZ_NPMD01000010.1 Protein Homology CDS 62157 63032 . - 0 ID=cds-WP_000774146.1;Parent=gene-CCO34_RS20365;Dbxref=GenBank:WP_000774146.1;Name=WP_000774146.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=CCO34_RS20365;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=WP_000774146.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 63061 64083 . - . ID=gene-CCO34_RS20370;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=CCO34_RS20370;old_locus_tag=CCO34_20360 NZ_NPMD01000010.1 Protein Homology CDS 63061 64083 . - 0 ID=cds-WP_000090739.1;Parent=gene-CCO34_RS20370;Dbxref=GenBank:WP_000090739.1;Name=WP_000090739.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=CCO34_RS20370;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000090739.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 64112 65113 . - . ID=gene-CCO34_RS20375;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=CCO34_RS20375;old_locus_tag=CCO34_20365 NZ_NPMD01000010.1 Protein Homology CDS 64112 65113 . - 0 ID=cds-WP_000981831.1;Parent=gene-CCO34_RS20375;Dbxref=GenBank:WP_000981831.1;Name=WP_000981831.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=CCO34_RS20375;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_000981831.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 65110 66153 . - . ID=gene-CCO34_RS20380;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=CCO34_RS20380;old_locus_tag=CCO34_20370 NZ_NPMD01000010.1 Protein Homology CDS 65110 66153 . - 0 ID=cds-WP_000911132.1;Parent=gene-CCO34_RS20380;Dbxref=GenBank:WP_000911132.1;Name=WP_000911132.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=CCO34_RS20380;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911132.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 66147 67682 . - . ID=gene-CCO34_RS20385;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=CCO34_RS20385;old_locus_tag=CCO34_20375 NZ_NPMD01000010.1 Protein Homology CDS 66147 67682 . - 0 ID=cds-WP_001167248.1;Parent=gene-CCO34_RS20385;Dbxref=GenBank:WP_001167248.1;Name=WP_001167248.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=CCO34_RS20385;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001167248.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 67938 68897 . + . ID=gene-CCO34_RS20390;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=CCO34_RS20390;old_locus_tag=CCO34_20380 NZ_NPMD01000010.1 Protein Homology CDS 67938 68897 . + 0 ID=cds-WP_001283049.1;Parent=gene-CCO34_RS20390;Dbxref=GenBank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=CCO34_RS20390;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 68984 70576 . + . ID=gene-CCO34_RS20395;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=CCO34_RS20395;old_locus_tag=CCO34_20385 NZ_NPMD01000010.1 Protein Homology CDS 68984 70576 . + 0 ID=cds-WP_000113085.1;Parent=gene-CCO34_RS20395;Dbxref=GenBank:WP_000113085.1;Name=WP_000113085.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=CCO34_RS20395;product=autoinducer-2 kinase;protein_id=WP_000113085.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 70590 70940 . + . ID=gene-CCO34_RS20400;Name=CCO34_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20400;old_locus_tag=CCO34_20390 NZ_NPMD01000010.1 Protein Homology CDS 70590 70940 . + 0 ID=cds-WP_001173080.1;Parent=gene-CCO34_RS20400;Dbxref=GenBank:WP_001173080.1;Name=WP_001173080.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=CCO34_RS20400;product=cupin domain-containing protein;protein_id=WP_001173080.1;transl_table=11 NZ_NPMD01000010.1 RefSeq pseudogene 71030 71170 . - . ID=gene-CCO34_RS20405;Name=CCO34_RS20405;end_range=71170,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS20405;old_locus_tag=CCO34_20395;partial=true;pseudo=true NZ_NPMD01000010.1 Protein Homology CDS 71030 71170 . - 0 ID=cds-CCO34_RS20405;Parent=gene-CCO34_RS20405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;end_range=71170,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO34_RS20405;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 NZ_NPMD01000010.1 RefSeq pseudogene 71222 71347 . - . ID=gene-CCO34_RS20410;Name=CCO34_RS20410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS20410;old_locus_tag=CCO34_20400;partial=true;pseudo=true;start_range=.,71222 NZ_NPMD01000010.1 Protein Homology CDS 71222 71347 . - 0 ID=cds-CCO34_RS20410;Parent=gene-CCO34_RS20410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=CCO34_RS20410;partial=true;product=hypothetical protein;pseudo=true;start_range=.,71222;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 71445 72167 . - . ID=gene-CCO34_RS20415;Name=CCO34_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20415;old_locus_tag=CCO34_20405 NZ_NPMD01000010.1 Protein Homology CDS 71445 72167 . - 0 ID=cds-WP_001535809.1;Parent=gene-CCO34_RS20415;Dbxref=GenBank:WP_001535809.1;Name=WP_001535809.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=CCO34_RS20415;product=GntR family transcriptional regulator;protein_id=WP_001535809.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 72230 73270 . - . ID=gene-CCO34_RS20420;Name=CCO34_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20420;old_locus_tag=CCO34_20410 NZ_NPMD01000010.1 Protein Homology CDS 72230 73270 . - 0 ID=cds-WP_000557873.1;Parent=gene-CCO34_RS20420;Dbxref=GenBank:WP_000557873.1;Name=WP_000557873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=CCO34_RS20420;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557873.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 73280 74239 . - . ID=gene-CCO34_RS20425;Name=CCO34_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20425;old_locus_tag=CCO34_20415 NZ_NPMD01000010.1 Protein Homology CDS 73280 74239 . - 0 ID=cds-WP_080180964.1;Parent=gene-CCO34_RS20425;Dbxref=GenBank:WP_080180964.1;Name=WP_080180964.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=CCO34_RS20425;product=aminoimidazole riboside kinase;protein_id=WP_080180964.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 74250 75584 . - . ID=gene-CCO34_RS20430;Name=CCO34_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20430;old_locus_tag=CCO34_20420 NZ_NPMD01000010.1 Protein Homology CDS 74250 75584 . - 0 ID=cds-WP_000777323.1;Parent=gene-CCO34_RS20430;Dbxref=GenBank:WP_000777323.1;Name=WP_000777323.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=CCO34_RS20430;product=MFS transporter;protein_id=WP_000777323.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 75848 76603 . - . ID=gene-CCO34_RS20435;Name=CCO34_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20435;old_locus_tag=CCO34_20425 NZ_NPMD01000010.1 Protein Homology CDS 75848 76603 . - 0 ID=cds-WP_000750762.1;Parent=gene-CCO34_RS20435;Dbxref=GenBank:WP_000750762.1;Name=WP_000750762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO34_RS20435;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750762.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 76704 77693 . - . ID=gene-CCO34_RS20440;Name=CCO34_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20440;old_locus_tag=CCO34_20430 NZ_NPMD01000010.1 Protein Homology CDS 76704 77693 . - 0 ID=cds-WP_000758711.1;Parent=gene-CCO34_RS20440;Dbxref=GenBank:WP_000758711.1;Name=WP_000758711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=CCO34_RS20440;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758711.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 77897 78859 . - . ID=gene-CCO34_RS20445;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CCO34_RS20445;old_locus_tag=CCO34_20435 NZ_NPMD01000010.1 Protein Homology CDS 77897 78859 . - 0 ID=cds-WP_000591793.1;Parent=gene-CCO34_RS20445;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=CCO34_RS20445;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 79044 79946 . - . ID=gene-CCO34_RS20450;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=CCO34_RS20450;old_locus_tag=CCO34_20440 NZ_NPMD01000010.1 Protein Homology CDS 79044 79946 . - 0 ID=cds-WP_001077320.1;Parent=gene-CCO34_RS20450;Dbxref=GenBank:WP_001077320.1;Name=WP_001077320.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=CCO34_RS20450;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077320.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 80094 80594 . - . ID=gene-CCO34_RS20455;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=CCO34_RS20455;old_locus_tag=CCO34_20445 NZ_NPMD01000010.1 Protein Homology CDS 80094 80594 . - 0 ID=cds-WP_001523742.1;Parent=gene-CCO34_RS20455;Dbxref=GenBank:WP_001523742.1;Name=WP_001523742.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=CCO34_RS20455;product=cell-envelope stress modulator CpxP;protein_id=WP_001523742.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 80745 81443 . + . ID=gene-CCO34_RS20460;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=CCO34_RS20460;old_locus_tag=CCO34_20450 NZ_NPMD01000010.1 Protein Homology CDS 80745 81443 . + 0 ID=cds-WP_001033731.1;Parent=gene-CCO34_RS20460;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=CCO34_RS20460;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 81440 82813 . + . ID=gene-CCO34_RS20465;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=CCO34_RS20465;old_locus_tag=CCO34_20455 NZ_NPMD01000010.1 Protein Homology CDS 81440 82813 . + 0 ID=cds-WP_000580403.1;Parent=gene-CCO34_RS20465;Dbxref=GenBank:WP_000580403.1;Name=WP_000580403.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=CCO34_RS20465;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580403.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 82864 83259 . - . ID=gene-CCO34_RS20470;Name=CCO34_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20470;old_locus_tag=CCO34_20460 NZ_NPMD01000010.1 Protein Homology CDS 82864 83259 . - 0 ID=cds-WP_000133655.1;Parent=gene-CCO34_RS20470;Dbxref=GenBank:WP_000133655.1;Name=WP_000133655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=CCO34_RS20470;product=nuclear transport factor 2 family protein;protein_id=WP_000133655.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 83271 83960 . - . ID=gene-CCO34_RS20475;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=CCO34_RS20475;old_locus_tag=CCO34_20465 NZ_NPMD01000010.1 Protein Homology CDS 83271 83960 . - 0 ID=cds-WP_000559229.1;Parent=gene-CCO34_RS20475;Dbxref=GenBank:WP_000559229.1;Name=WP_000559229.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=CCO34_RS20475;product=6-hydroxyaminopurine reductase;protein_id=WP_000559229.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 84030 84650 . - . ID=gene-CCO34_RS20480;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=CCO34_RS20480;old_locus_tag=CCO34_20470 NZ_NPMD01000010.1 Protein Homology CDS 84030 84650 . - 0 ID=cds-WP_000122632.1;Parent=gene-CCO34_RS20480;Dbxref=GenBank:WP_000122632.1;Name=WP_000122632.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=CCO34_RS20480;product=superoxide dismutase [Mn];protein_id=WP_000122632.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 84979 85962 . + . ID=gene-CCO34_RS20485;Name=CCO34_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20485;old_locus_tag=CCO34_20475 NZ_NPMD01000010.1 Protein Homology CDS 84979 85962 . + 0 ID=cds-WP_000812822.1;Parent=gene-CCO34_RS20485;Dbxref=GenBank:WP_000812822.1;Name=WP_000812822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=CCO34_RS20485;product=TRAP transporter substrate-binding protein;protein_id=WP_000812822.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 85981 86496 . + . ID=gene-CCO34_RS20490;Name=CCO34_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20490;old_locus_tag=CCO34_20480 NZ_NPMD01000010.1 Protein Homology CDS 85981 86496 . + 0 ID=cds-WP_001091413.1;Parent=gene-CCO34_RS20490;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=CCO34_RS20490;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 86489 87796 . + . ID=gene-CCO34_RS20495;Name=CCO34_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20495;old_locus_tag=CCO34_20485 NZ_NPMD01000010.1 Protein Homology CDS 86489 87796 . + 0 ID=cds-WP_000566800.1;Parent=gene-CCO34_RS20495;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=CCO34_RS20495;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 87954 88637 . - . ID=gene-CCO34_RS20500;Name=CCO34_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20500;old_locus_tag=CCO34_20490 NZ_NPMD01000010.1 Protein Homology CDS 87954 88637 . - 0 ID=cds-WP_000378722.1;Parent=gene-CCO34_RS20500;Dbxref=GenBank:WP_000378722.1;Name=WP_000378722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=CCO34_RS20500;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378722.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 89256 90290 . + . ID=gene-CCO34_RS20505;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=CCO34_RS20505;old_locus_tag=CCO34_20495 NZ_NPMD01000010.1 Protein Homology CDS 89256 90290 . + 0 ID=cds-WP_000063541.1;Parent=gene-CCO34_RS20505;Dbxref=GenBank:WP_000063541.1;Name=WP_000063541.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=CCO34_RS20505;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063541.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 90287 91135 . - . ID=gene-CCO34_RS20510;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=CCO34_RS20510;old_locus_tag=CCO34_20500 NZ_NPMD01000010.1 Protein Homology CDS 90287 91135 . - 0 ID=cds-WP_000013290.1;Parent=gene-CCO34_RS20510;Dbxref=GenBank:WP_000013290.1;Name=WP_000013290.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=CCO34_RS20510;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013290.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 91288 92124 . - . ID=gene-CCO34_RS20515;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=CCO34_RS20515;old_locus_tag=CCO34_20505 NZ_NPMD01000010.1 Protein Homology CDS 91288 92124 . - 0 ID=cds-WP_000217112.1;Parent=gene-CCO34_RS20515;Dbxref=GenBank:WP_000217112.1;Name=WP_000217112.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=CCO34_RS20515;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217112.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 92412 93881 . + . ID=gene-CCO34_RS20520;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=CCO34_RS20520;old_locus_tag=CCO34_20510 NZ_NPMD01000010.1 Protein Homology CDS 92412 93881 . + 0 ID=cds-WP_000143970.1;Parent=gene-CCO34_RS20520;Dbxref=GenBank:WP_000143970.1;Name=WP_000143970.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=CCO34_RS20520;product=rhamnulokinase;protein_id=WP_000143970.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 93878 95137 . + . ID=gene-CCO34_RS20525;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=CCO34_RS20525;old_locus_tag=CCO34_20515 NZ_NPMD01000010.1 Protein Homology CDS 93878 95137 . + 0 ID=cds-WP_000211470.1;Parent=gene-CCO34_RS20525;Dbxref=GenBank:WP_000211470.1;Name=WP_000211470.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=CCO34_RS20525;product=L-rhamnose isomerase;protein_id=WP_000211470.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 95280 96107 . + . ID=gene-CCO34_RS20530;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=CCO34_RS20530;old_locus_tag=CCO34_20520 NZ_NPMD01000010.1 Protein Homology CDS 95280 96107 . + 0 ID=cds-WP_001179685.1;Parent=gene-CCO34_RS20530;Dbxref=GenBank:WP_001179685.1;Name=WP_001179685.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=CCO34_RS20530;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179685.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 96234 97382 . + . ID=gene-CCO34_RS20535;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO34_RS20535;old_locus_tag=CCO34_20525 NZ_NPMD01000010.1 Protein Homology CDS 96234 97382 . + 0 ID=cds-WP_001627376.1;Parent=gene-CCO34_RS20535;Dbxref=GenBank:WP_001627376.1;Name=WP_001627376.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=CCO34_RS20535;product=lactaldehyde reductase;protein_id=WP_001627376.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 97379 97693 . + . ID=gene-CCO34_RS20540;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=CCO34_RS20540;old_locus_tag=CCO34_20530 NZ_NPMD01000010.1 Protein Homology CDS 97379 97693 . + 0 ID=cds-WP_000619475.1;Parent=gene-CCO34_RS20540;Dbxref=GenBank:WP_000619475.1;Name=WP_000619475.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=CCO34_RS20540;product=L-rhamnose mutarotase;protein_id=WP_000619475.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 97782 98330 . - . ID=gene-CCO34_RS20545;Name=CCO34_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20545;old_locus_tag=CCO34_20535 NZ_NPMD01000010.1 Protein Homology CDS 97782 98330 . - 0 ID=cds-WP_001517951.1;Parent=gene-CCO34_RS20545;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=CCO34_RS20545;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 98431 99090 . + . ID=gene-CCO34_RS20550;Name=CCO34_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20550;old_locus_tag=CCO34_20540 NZ_NPMD01000010.1 Protein Homology CDS 98431 99090 . + 0 ID=cds-WP_000683586.1;Parent=gene-CCO34_RS20550;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=CCO34_RS20550;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 99090 99413 . + . ID=gene-CCO34_RS20555;Name=CCO34_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20555;old_locus_tag=CCO34_20545 NZ_NPMD01000010.1 Protein Homology CDS 99090 99413 . + 0 ID=cds-WP_000527677.1;Parent=gene-CCO34_RS20555;Dbxref=GenBank:WP_000527677.1;Name=WP_000527677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=CCO34_RS20555;product=AzlD domain-containing protein;protein_id=WP_000527677.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 99768 100868 . - . ID=gene-CCO34_RS20560;Name=CCO34_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20560;old_locus_tag=CCO34_20550 NZ_NPMD01000010.1 Protein Homology CDS 99768 100868 . - 0 ID=cds-WP_000828039.1;Parent=gene-CCO34_RS20560;Dbxref=GenBank:WP_000828039.1;Name=WP_000828039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=CCO34_RS20560;product=YiiG family protein;protein_id=WP_000828039.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 101051 102082 . + . ID=gene-CCO34_RS20565;Name=CCO34_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20565;old_locus_tag=CCO34_20555 NZ_NPMD01000010.1 Protein Homology CDS 101051 102082 . + 0 ID=cds-WP_000710966.1;Parent=gene-CCO34_RS20565;Dbxref=GenBank:WP_000710966.1;Name=WP_000710966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=CCO34_RS20565;product=YiiG family protein;protein_id=WP_000710966.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 102350 103186 . - . ID=gene-CCO34_RS20570;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CCO34_RS20570;old_locus_tag=CCO34_20560 NZ_NPMD01000010.1 Protein Homology CDS 102350 103186 . - 0 ID=cds-WP_001059740.1;Parent=gene-CCO34_RS20570;Dbxref=GenBank:WP_001059740.1;Name=WP_001059740.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=CCO34_RS20570;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059740.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 103381 106431 . + . ID=gene-CCO34_RS20580;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO34_RS20580;old_locus_tag=CCO34_20570 NZ_NPMD01000010.1 Protein Homology CDS 103381 106431 . + 0 ID=cds-WP_077248424.1;Parent=gene-CCO34_RS20580;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=CCO34_RS20580;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:103966..103968%2Caa:Sec);transl_table=11 NZ_NPMD01000010.1 RefSeq gene 106444 107346 . + . ID=gene-CCO34_RS20585;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO34_RS20585;old_locus_tag=CCO34_20575 NZ_NPMD01000010.1 Protein Homology CDS 106444 107346 . + 0 ID=cds-WP_000331364.1;Parent=gene-CCO34_RS20585;Dbxref=GenBank:WP_000331364.1;Name=WP_000331364.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=CCO34_RS20585;product=formate dehydrogenase subunit beta;protein_id=WP_000331364.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 107343 107978 . + . ID=gene-CCO34_RS20590;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=CCO34_RS20590;old_locus_tag=CCO34_20580 NZ_NPMD01000010.1 Protein Homology CDS 107343 107978 . + 0 ID=cds-WP_000829025.1;Parent=gene-CCO34_RS20590;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=CCO34_RS20590;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 107975 108904 . + . ID=gene-CCO34_RS20595;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=CCO34_RS20595;old_locus_tag=CCO34_20585 NZ_NPMD01000010.1 Protein Homology CDS 107975 108904 . + 0 ID=cds-WP_000027730.1;Parent=gene-CCO34_RS20595;Dbxref=GenBank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=CCO34_RS20595;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 108951 109241 . - . ID=gene-CCO34_RS20600;Name=CCO34_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20600;old_locus_tag=CCO34_20590 NZ_NPMD01000010.1 Protein Homology CDS 108951 109241 . - 0 ID=cds-WP_000362050.1;Parent=gene-CCO34_RS20600;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=CCO34_RS20600;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 109242 109553 . - . ID=gene-CCO34_RS20605;Name=CCO34_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20605;old_locus_tag=CCO34_20595 NZ_NPMD01000010.1 Protein Homology CDS 109242 109553 . - 0 ID=cds-WP_001159635.1;Parent=gene-CCO34_RS20605;Dbxref=GenBank:WP_001159635.1;Name=WP_001159635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=CCO34_RS20605;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159635.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 109771 110700 . + . ID=gene-CCO34_RS20610;Name=CCO34_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20610;old_locus_tag=CCO34_20600 NZ_NPMD01000010.1 Protein Homology CDS 109771 110700 . + 0 ID=cds-WP_001127705.1;Parent=gene-CCO34_RS20610;Dbxref=GenBank:WP_001127705.1;Name=WP_001127705.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=CCO34_RS20610;product=alpha/beta hydrolase;protein_id=WP_001127705.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 110786 111097 . + . ID=gene-CCO34_RS20615;Name=CCO34_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20615;old_locus_tag=CCO34_20605 NZ_NPMD01000010.1 Protein Homology CDS 110786 111097 . + 0 ID=cds-WP_000558163.1;Parent=gene-CCO34_RS20615;Dbxref=GenBank:WP_000558163.1;Name=WP_000558163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=CCO34_RS20615;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558163.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 111094 111540 . + . ID=gene-CCO34_RS20620;Name=CCO34_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20620;old_locus_tag=CCO34_20610 NZ_NPMD01000010.1 Protein Homology CDS 111094 111540 . + 0 ID=cds-WP_001259012.1;Parent=gene-CCO34_RS20620;Dbxref=GenBank:WP_001259012.1;Name=WP_001259012.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=CCO34_RS20620;product=helix-turn-helix domain-containing protein;protein_id=WP_001259012.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 111555 112496 . - . ID=gene-CCO34_RS20625;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=CCO34_RS20625;old_locus_tag=CCO34_20615 NZ_NPMD01000010.1 Protein Homology CDS 111555 112496 . - 0 ID=cds-WP_001518251.1;Parent=gene-CCO34_RS20625;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=CCO34_RS20625;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 112541 112978 . - . ID=gene-CCO34_RS20630;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CCO34_RS20630;old_locus_tag=CCO34_20620 NZ_NPMD01000010.1 Protein Homology CDS 112541 112978 . - 0 ID=cds-WP_000560969.1;Parent=gene-CCO34_RS20630;Dbxref=GenBank:WP_000560969.1;Name=WP_000560969.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=CCO34_RS20630;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560969.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 112975 113847 . - . ID=gene-CCO34_RS20635;Name=CCO34_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20635;old_locus_tag=CCO34_20625 NZ_NPMD01000010.1 Protein Homology CDS 112975 113847 . - 0 ID=cds-WP_000921423.1;Parent=gene-CCO34_RS20635;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=CCO34_RS20635;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 113841 114440 . - . ID=gene-CCO34_RS20640;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=CCO34_RS20640;old_locus_tag=CCO34_20630 NZ_NPMD01000010.1 Protein Homology CDS 113841 114440 . - 0 ID=cds-WP_000965695.1;Parent=gene-CCO34_RS20640;Dbxref=GenBank:WP_000965695.1;Name=WP_000965695.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=CCO34_RS20640;product=glucose-1-phosphatase;protein_id=WP_000965695.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 114631 115434 . - . ID=gene-CCO34_RS20645;Name=CCO34_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20645;old_locus_tag=CCO34_20635 NZ_NPMD01000010.1 Protein Homology CDS 114631 115434 . - 0 ID=cds-WP_000059693.1;Parent=gene-CCO34_RS20645;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=CCO34_RS20645;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 115468 116364 . - . ID=gene-CCO34_RS20650;Name=CCO34_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20650;old_locus_tag=CCO34_20640 NZ_NPMD01000010.1 Protein Homology CDS 115468 116364 . - 0 ID=cds-WP_001520529.1;Parent=gene-CCO34_RS20650;Dbxref=GenBank:WP_001520529.1;Name=WP_001520529.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=CCO34_RS20650;product=sugar kinase;protein_id=WP_001520529.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 116529 117425 . + . ID=gene-CCO34_RS20655;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=CCO34_RS20655;old_locus_tag=CCO34_20645 NZ_NPMD01000010.1 Protein Homology CDS 116529 117425 . + 0 ID=cds-WP_094965516.1;Parent=gene-CCO34_RS20655;Dbxref=GenBank:WP_094965516.1;Name=WP_094965516.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=CCO34_RS20655;product=sulfolactaldehyde 3-reductase;protein_id=WP_094965516.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 117448 118326 . + . ID=gene-CCO34_RS20660;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=CCO34_RS20660;old_locus_tag=CCO34_20650 NZ_NPMD01000010.1 Protein Homology CDS 117448 118326 . + 0 ID=cds-WP_001067412.1;Parent=gene-CCO34_RS20660;Dbxref=GenBank:WP_001067412.1;Name=WP_001067412.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=CCO34_RS20660;product=sulfofructosephosphate aldolase;protein_id=WP_001067412.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 118342 119583 . + . ID=gene-CCO34_RS20665;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=CCO34_RS20665;old_locus_tag=CCO34_20655 NZ_NPMD01000010.1 Protein Homology CDS 118342 119583 . + 0 ID=cds-WP_000870940.1;Parent=gene-CCO34_RS20665;Dbxref=GenBank:WP_000870940.1;Name=WP_000870940.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312830.1;locus_tag=CCO34_RS20665;product=sulfoquinovose isomerase;protein_id=WP_000870940.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 119655 120557 . + . ID=gene-CCO34_RS20670;Name=CCO34_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20670;old_locus_tag=CCO34_20660 NZ_NPMD01000010.1 Protein Homology CDS 119655 120557 . + 0 ID=cds-WP_024131638.1;Parent=gene-CCO34_RS20670;Dbxref=GenBank:WP_024131638.1;Name=WP_024131638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611165.1;locus_tag=CCO34_RS20670;product=aldose-1-epimerase;protein_id=WP_024131638.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 120646 121521 . + . ID=gene-CCO34_RS20675;Name=CCO34_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20675;old_locus_tag=CCO34_20665 NZ_NPMD01000010.1 Protein Homology CDS 120646 121521 . + 0 ID=cds-WP_000345334.1;Parent=gene-CCO34_RS20675;Dbxref=GenBank:WP_000345334.1;Name=WP_000345334.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312828.1;locus_tag=CCO34_RS20675;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000345334.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 121645 123681 . + . ID=gene-CCO34_RS20680;Name=CCO34_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20680;old_locus_tag=CCO34_20670 NZ_NPMD01000010.1 Protein Homology CDS 121645 123681 . + 0 ID=cds-WP_023228752.1;Parent=gene-CCO34_RS20680;Dbxref=GenBank:WP_023228752.1;Name=WP_023228752.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523759.1;locus_tag=CCO34_RS20680;product=alpha-glucosidase;protein_id=WP_023228752.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 123727 125109 . + . ID=gene-CCO34_RS20685;Name=CCO34_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20685;old_locus_tag=CCO34_20675 NZ_NPMD01000010.1 Protein Homology CDS 123727 125109 . + 0 ID=cds-WP_000084232.1;Parent=gene-CCO34_RS20685;Dbxref=GenBank:WP_000084232.1;Name=WP_000084232.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084232.1;locus_tag=CCO34_RS20685;product=MFS transporter;protein_id=WP_000084232.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 125155 126573 . + . ID=gene-CCO34_RS20690;Name=CCO34_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20690;old_locus_tag=CCO34_20680 NZ_NPMD01000010.1 Protein Homology CDS 125155 126573 . + 0 ID=cds-WP_001112785.1;Parent=gene-CCO34_RS20690;Dbxref=GenBank:WP_001112785.1;Name=WP_001112785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=CCO34_RS20690;product=MFS transporter;protein_id=WP_001112785.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 126641 127333 . + . ID=gene-CCO34_RS20695;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=CCO34_RS20695;old_locus_tag=CCO34_20685 NZ_NPMD01000010.1 Protein Homology CDS 126641 127333 . + 0 ID=cds-WP_000838828.1;Parent=gene-CCO34_RS20695;Dbxref=GenBank:WP_000838828.1;Name=WP_000838828.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=CCO34_RS20695;product=porin OmpL;protein_id=WP_000838828.1;transl_table=11 NZ_NPMD01000010.1 RefSeq pseudogene 127490 127597 . + . ID=gene-CCO34_RS25585;Name=CCO34_RS25585;end_range=127597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25585;partial=true;pseudo=true NZ_NPMD01000010.1 Protein Homology CDS 127490 127597 . + 0 ID=cds-CCO34_RS25585;Parent=gene-CCO34_RS25585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=127597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=CCO34_RS25585;partial=true;product=STM4015 family protein;pseudo=true;transl_table=11 NZ_NPMD01000010.1 RefSeq pseudogene 127598 127669 . + . ID=gene-CCO34_RS25890;Name=CCO34_RS25890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25890;partial=true;pseudo=true;start_range=.,127598 NZ_NPMD01000010.1 Protein Homology CDS 127598 127669 . + 0 ID=cds-CCO34_RS25890;Parent=gene-CCO34_RS25890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=CCO34_RS25890;partial=true;product=hypothetical protein;pseudo=true;start_range=.,127598;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 127724 129547 . - . ID=gene-CCO34_RS20705;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CCO34_RS20705;old_locus_tag=CCO34_20695 NZ_NPMD01000010.1 Protein Homology CDS 127724 129547 . - 0 ID=cds-WP_000572064.1;Parent=gene-CCO34_RS20705;Dbxref=GenBank:WP_000572064.1;Name=WP_000572064.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=CCO34_RS20705;product=ribosome-dependent GTPase TypA;protein_id=WP_000572064.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 129923 131332 . + . ID=gene-CCO34_RS20715;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CCO34_RS20715;old_locus_tag=CCO34_20705 NZ_NPMD01000010.1 Protein Homology CDS 129923 131332 . + 0 ID=cds-WP_001271699.1;Parent=gene-CCO34_RS20715;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=CCO34_RS20715;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 131607 132656 . + . ID=gene-CCO34_RS20725;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=CCO34_RS20725;old_locus_tag=CCO34_20715 NZ_NPMD01000010.1 Protein Homology CDS 131607 132656 . + 0 ID=cds-WP_000146194.1;Parent=gene-CCO34_RS20725;Dbxref=GenBank:WP_000146194.1;Name=WP_000146194.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=CCO34_RS20725;product=nitrogen regulation protein NR(II);protein_id=WP_000146194.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 132665 134074 . + . ID=gene-CCO34_RS20730;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=CCO34_RS20730;old_locus_tag=CCO34_20720 NZ_NPMD01000010.1 Protein Homology CDS 132665 134074 . + 0 ID=cds-WP_001188782.1;Parent=gene-CCO34_RS20730;Dbxref=GenBank:WP_001188782.1;Name=WP_001188782.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=CCO34_RS20730;product=nitrogen regulation protein NR(I);protein_id=WP_001188782.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 134187 134297 . + . ID=gene-CCO34_RS20735;Name=CCO34_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20735;old_locus_tag=CCO34_20725 NZ_NPMD01000010.1 Protein Homology CDS 134187 134297 . + 0 ID=cds-WP_001578131.1;Parent=gene-CCO34_RS20735;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=CCO34_RS20735;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 134387 135760 . - . ID=gene-CCO34_RS20740;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=CCO34_RS20740;old_locus_tag=CCO34_20730 NZ_NPMD01000010.1 Protein Homology CDS 134387 135760 . - 0 ID=cds-WP_000003520.1;Parent=gene-CCO34_RS20740;Dbxref=GenBank:WP_000003520.1;Name=WP_000003520.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=CCO34_RS20740;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003520.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 135949 136464 . - . ID=gene-CCO34_RS20745;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=CCO34_RS20745;old_locus_tag=CCO34_20735 NZ_NPMD01000010.1 Protein Homology CDS 135949 136464 . - 0 ID=cds-WP_000743292.1;Parent=gene-CCO34_RS20745;Dbxref=GenBank:WP_000743292.1;Name=WP_000743292.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=CCO34_RS20745;product=Der GTPase-activating protein YihI;protein_id=WP_000743292.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 136583 136807 . - . ID=gene-CCO34_RS20750;Name=CCO34_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20750;old_locus_tag=CCO34_20740 NZ_NPMD01000010.1 Protein Homology CDS 136583 136807 . - 0 ID=cds-WP_001541209.1;Parent=gene-CCO34_RS20750;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=CCO34_RS20750;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 137047 137679 . + . ID=gene-CCO34_RS20755;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CCO34_RS20755;old_locus_tag=CCO34_20745 NZ_NPMD01000010.1 Protein Homology CDS 137047 137679 . + 0 ID=cds-WP_000183327.1;Parent=gene-CCO34_RS20755;Dbxref=GenBank:WP_000183327.1;Name=WP_000183327.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=CCO34_RS20755;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183327.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 138014 140800 . - . ID=gene-CCO34_RS20760;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CCO34_RS20760;old_locus_tag=CCO34_20750 NZ_NPMD01000010.1 Protein Homology CDS 138014 140800 . - 0 ID=cds-WP_000249976.1;Parent=gene-CCO34_RS20760;Dbxref=GenBank:WP_000249976.1;Name=WP_000249976.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=CCO34_RS20760;product=DNA polymerase I;protein_id=WP_000249976.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 141188 142096 . + . ID=gene-CCO34_RS20770;Name=CCO34_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20770;old_locus_tag=CCO34_20760 NZ_NPMD01000010.1 Protein Homology CDS 141188 142096 . + 0 ID=cds-WP_000196894.1;Parent=gene-CCO34_RS20770;Dbxref=GenBank:WP_000196894.1;Name=WP_000196894.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=CCO34_RS20770;product=acyltransferase;protein_id=WP_000196894.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 142109 142732 . - . ID=gene-CCO34_RS20775;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=CCO34_RS20775;old_locus_tag=CCO34_20765 NZ_NPMD01000010.1 Protein Homology CDS 142109 142732 . - 0 ID=cds-WP_000725364.1;Parent=gene-CCO34_RS20775;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=CCO34_RS20775;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 142749 143735 . - . ID=gene-CCO34_RS20780;Name=CCO34_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20780;old_locus_tag=CCO34_20770 NZ_NPMD01000010.1 Protein Homology CDS 142749 143735 . - 0 ID=cds-WP_000999251.1;Parent=gene-CCO34_RS20780;Dbxref=GenBank:WP_000999251.1;Name=WP_000999251.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=CCO34_RS20780;product=serine/threonine protein kinase;protein_id=WP_000999251.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 143812 144081 . - . ID=gene-CCO34_RS20785;Name=CCO34_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20785;old_locus_tag=CCO34_20775 NZ_NPMD01000010.1 Protein Homology CDS 143812 144081 . - 0 ID=cds-WP_000649858.1;Parent=gene-CCO34_RS20785;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=CCO34_RS20785;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 144151 144735 . + . ID=gene-CCO34_RS20790;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CCO34_RS20790;old_locus_tag=CCO34_20780 NZ_NPMD01000010.1 Protein Homology CDS 144151 144735 . + 0 ID=cds-WP_001046889.1;Parent=gene-CCO34_RS20790;Dbxref=GenBank:WP_001046889.1;Name=WP_001046889.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=CCO34_RS20790;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001046889.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 144732 145247 . + . ID=gene-CCO34_RS20795;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CCO34_RS20795;old_locus_tag=CCO34_20785 NZ_NPMD01000010.1 Protein Homology CDS 144732 145247 . + 0 ID=cds-WP_023602563.1;Parent=gene-CCO34_RS20795;Dbxref=GenBank:WP_023602563.1;Name=WP_023602563.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=CCO34_RS20795;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_023602563.1;transl_table=11 NZ_NPMD01000010.1 RefSeq gene 145551 145666 . - . ID=gene-CCO34_RS20800;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO34_RS20800;old_locus_tag=CCO34_20790 NZ_NPMD01000010.1 cmsearch rRNA 145551 145666 . - . ID=rna-CCO34_RS20800;Parent=gene-CCO34_RS20800;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS20800;product=5S ribosomal RNA NZ_NPMD01000010.1 cmsearch exon 145551 145666 . - . ID=exon-CCO34_RS20800-1;Parent=rna-CCO34_RS20800;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS20800;product=5S ribosomal RNA ##sequence-region NZ_NPMD01000011.1 1 135284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000011.1 RefSeq region 1 135284 . + . ID=NZ_NPMD01000011.1:1..135284;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000011.1 RefSeq gene 617 907 . + . ID=gene-CCO34_RS20805;Name=CCO34_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20805;old_locus_tag=CCO34_20795 NZ_NPMD01000011.1 Protein Homology CDS 617 907 . + 0 ID=cds-WP_094965519.1;Parent=gene-CCO34_RS20805;Dbxref=GenBank:WP_094965519.1;Name=WP_094965519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000538310.1;locus_tag=CCO34_RS20805;product=hypothetical protein;protein_id=WP_094965519.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 897 1796 . + . ID=gene-CCO34_RS20810;Name=CCO34_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20810;old_locus_tag=CCO34_20800 NZ_NPMD01000011.1 Protein Homology CDS 897 1796 . + 0 ID=cds-WP_094965521.1;Parent=gene-CCO34_RS20810;Dbxref=GenBank:WP_094965521.1;Name=WP_094965521.1;Ontology_term=GO:0050135;gbkey=CDS;go_function=NADP+ nucleosidase activity|0050135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004225022.1;locus_tag=CCO34_RS20810;product=TIR domain-containing protein;protein_id=WP_094965521.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 1920 4163 . - . ID=gene-CCO34_RS20815;Name=CCO34_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20815;old_locus_tag=CCO34_20805 NZ_NPMD01000011.1 Protein Homology CDS 1920 4163 . - 0 ID=cds-WP_094965523.1;Parent=gene-CCO34_RS20815;Dbxref=GenBank:WP_094965523.1;Name=WP_094965523.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019313.6;locus_tag=CCO34_RS20815;product=KAP family P-loop NTPase fold protein;protein_id=WP_094965523.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 4165 5253 . - . ID=gene-CCO34_RS20820;Name=CCO34_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20820;old_locus_tag=CCO34_20810 NZ_NPMD01000011.1 Protein Homology CDS 4165 5253 . - 0 ID=cds-WP_094965525.1;Parent=gene-CCO34_RS20820;Dbxref=GenBank:WP_094965525.1;Name=WP_094965525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952219.1;locus_tag=CCO34_RS20820;product=transcriptional regulator;protein_id=WP_094965525.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 5824 6786 . + . ID=gene-CCO34_RS20825;Name=CCO34_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20825;old_locus_tag=CCO34_20815 NZ_NPMD01000011.1 Protein Homology CDS 5824 6786 . + 0 ID=cds-WP_094965526.1;Parent=gene-CCO34_RS20825;Dbxref=GenBank:WP_094965526.1;Name=WP_094965526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801688.1;locus_tag=CCO34_RS20825;product=hypothetical protein;protein_id=WP_094965526.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 6787 7077 . + . ID=gene-CCO34_RS20830;Name=CCO34_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20830;old_locus_tag=CCO34_20820 NZ_NPMD01000011.1 Protein Homology CDS 6787 7077 . + 0 ID=cds-WP_094965528.1;Parent=gene-CCO34_RS20830;Dbxref=GenBank:WP_094965528.1;Name=WP_094965528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490519.1;locus_tag=CCO34_RS20830;product=cytoplasmic protein;protein_id=WP_094965528.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 7074 7508 . + . ID=gene-CCO34_RS20835;Name=CCO34_RS20835;end_range=7508,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS20835;old_locus_tag=CCO34_20825;partial=true;pseudo=true NZ_NPMD01000011.1 Protein Homology CDS 7074 7508 . + 0 ID=cds-CCO34_RS20835;Parent=gene-CCO34_RS20835;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490520.1;locus_tag=CCO34_RS20835;partial=true;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 7492 7938 . + . ID=gene-CCO34_RS20840;Name=CCO34_RS20840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS20840;old_locus_tag=CCO34_20830;partial=true;pseudo=true;start_range=.,7492 NZ_NPMD01000011.1 Protein Homology CDS 7492 7938 . + 0 ID=cds-CCO34_RS20840;Parent=gene-CCO34_RS20840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000082220.1;locus_tag=CCO34_RS20840;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,7492;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 8153 9016 . - . ID=gene-CCO34_RS20845;Name=CCO34_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20845;old_locus_tag=CCO34_20835 NZ_NPMD01000011.1 Protein Homology CDS 8153 9016 . - 0 ID=cds-WP_000074442.1;Parent=gene-CCO34_RS20845;Dbxref=GenBank:WP_000074442.1;Name=WP_000074442.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074442.1;locus_tag=CCO34_RS20845;product=RepB family plasmid replication initiator protein;protein_id=WP_000074442.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 9554 10195 . + . ID=gene-CCO34_RS20850;Name=CCO34_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20850;old_locus_tag=CCO34_20840 NZ_NPMD01000011.1 Protein Homology CDS 9554 10195 . + 0 ID=cds-WP_000511282.1;Parent=gene-CCO34_RS20850;Dbxref=GenBank:WP_000511282.1;Name=WP_000511282.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511282.1;locus_tag=CCO34_RS20850;product=ParA family protein;protein_id=WP_000511282.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 10287 10625 . + . ID=gene-CCO34_RS20855;Name=CCO34_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20855;old_locus_tag=CCO34_20845 NZ_NPMD01000011.1 Protein Homology CDS 10287 10625 . + 0 ID=cds-WP_024136783.1;Parent=gene-CCO34_RS20855;Dbxref=GenBank:WP_024136783.1;Name=WP_024136783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001838487.1;locus_tag=CCO34_RS20855;product=hypothetical protein;protein_id=WP_024136783.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 10840 11893 . - . ID=gene-CCO34_RS20860;Name=umuC;end_range=11893,.;gbkey=Gene;gene=umuC;gene_biotype=pseudogene;locus_tag=CCO34_RS20860;old_locus_tag=CCO34_20850;partial=true;pseudo=true NZ_NPMD01000011.1 Protein Homology CDS 10840 11893 . - 0 ID=cds-CCO34_RS20860;Parent=gene-CCO34_RS20860;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006281,GO:0003684;end_range=11893,.;gbkey=CDS;gene=umuC;go_function=damaged DNA binding|0003684||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490544.1;locus_tag=CCO34_RS20860;partial=true;product=translesion error-prone DNA polymerase V subunit UmuC;pseudo=true;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 11950 12954 . + . ID=gene-CCO34_RS20865;Name=CCO34_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20865;old_locus_tag=CCO34_20855 NZ_NPMD01000011.1 Protein Homology CDS 11950 12954 . + 0 ID=cds-WP_094965530.1;Parent=gene-CCO34_RS20865;Dbxref=GenBank:WP_094965530.1;Name=WP_094965530.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594566.1;locus_tag=CCO34_RS20865;product=tyrosine-type recombinase/integrase;protein_id=WP_094965530.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 12938 14482 . + . ID=gene-CCO34_RS20870;Name=CCO34_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20870;old_locus_tag=CCO34_20860 NZ_NPMD01000011.1 GeneMarkS-2+ CDS 12938 14482 . + 0 ID=cds-WP_201792799.1;Parent=gene-CCO34_RS20870;Dbxref=GenBank:WP_201792799.1;Name=WP_201792799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS20870;product=integrase;protein_id=WP_201792799.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 14430 15065 . + . ID=gene-CCO34_RS25690;Name=CCO34_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25690 NZ_NPMD01000011.1 Protein Homology CDS 14430 15065 . + 0 ID=cds-WP_237585409.1;Parent=gene-CCO34_RS25690;Dbxref=GenBank:WP_237585409.1;Name=WP_237585409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839924.1;locus_tag=CCO34_RS25690;product=integrase;protein_id=WP_237585409.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 15202 16410 . + . ID=gene-CCO34_RS20875;Name=CCO34_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20875;old_locus_tag=CCO34_20865 NZ_NPMD01000011.1 Protein Homology CDS 15202 16410 . + 0 ID=cds-WP_094965532.1;Parent=gene-CCO34_RS20875;Dbxref=GenBank:WP_094965532.1;Name=WP_094965532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110237.1;locus_tag=CCO34_RS20875;product=type II site-specific deoxyribonuclease;protein_id=WP_094965532.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 16444 17877 . - . ID=gene-CCO34_RS20880;Name=CCO34_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20880;old_locus_tag=CCO34_20870 NZ_NPMD01000011.1 Protein Homology CDS 16444 17877 . - 0 ID=cds-WP_094965533.1;Parent=gene-CCO34_RS20880;Dbxref=GenBank:WP_094965533.1;Name=WP_094965533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288433.1;locus_tag=CCO34_RS20880;product=DNA cytosine methyltransferase;protein_id=WP_094965533.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 18180 20318 . - . ID=gene-CCO34_RS20885;Name=CCO34_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20885;old_locus_tag=CCO34_20875 NZ_NPMD01000011.1 Protein Homology CDS 18180 20318 . - 0 ID=cds-WP_094965535.1;Parent=gene-CCO34_RS20885;Dbxref=GenBank:WP_094965535.1;Name=WP_094965535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350636.1;locus_tag=CCO34_RS20885;product=AAA family ATPase;protein_id=WP_094965535.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 20555 20803 . - . ID=gene-CCO34_RS20890;Name=CCO34_RS20890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS20890;old_locus_tag=CCO34_20880;partial=true;pseudo=true;start_range=.,20555 NZ_NPMD01000011.1 Protein Homology CDS 20555 20803 . - 0 ID=cds-CCO34_RS20890;Parent=gene-CCO34_RS20890;Note=binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490544.1;locus_tag=CCO34_RS20890;partial=true;product=DNA polymerase V subunit UmuC;pseudo=true;start_range=.,20555;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 20787 21230 . - . ID=gene-CCO34_RS20895;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=CCO34_RS20895;old_locus_tag=CCO34_20885 NZ_NPMD01000011.1 Protein Homology CDS 20787 21230 . - 0 ID=cds-WP_094965539.1;Parent=gene-CCO34_RS20895;Dbxref=GenBank:WP_094965539.1;Name=WP_094965539.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000945338.1;locus_tag=CCO34_RS20895;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_094965539.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 21533 22501 . + . ID=gene-CCO34_RS20900;Name=parM;gbkey=Gene;gene=parM;gene_biotype=protein_coding;locus_tag=CCO34_RS20900;old_locus_tag=CCO34_20890 NZ_NPMD01000011.1 Protein Homology CDS 21533 22501 . + 0 ID=cds-WP_024134920.1;Parent=gene-CCO34_RS20900;Dbxref=GenBank:WP_024134920.1;Name=WP_024134920.1;gbkey=CDS;gene=parM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229768.1;locus_tag=CCO34_RS20900;product=plasmid segregation protein ParM domain-containing protein;protein_id=WP_024134920.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 22504 23148 . + . ID=gene-CCO34_RS20905;Name=CCO34_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20905;old_locus_tag=CCO34_20895 NZ_NPMD01000011.1 Protein Homology CDS 22504 23148 . + 0 ID=cds-WP_058108382.1;Parent=gene-CCO34_RS20905;Dbxref=GenBank:WP_058108382.1;Name=WP_058108382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272525.1;locus_tag=CCO34_RS20905;product=plasmid partitioning/stability family protein;protein_id=WP_058108382.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 23235 23534 . + . ID=gene-CCO34_RS20910;Name=CCO34_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20910;old_locus_tag=CCO34_20900 NZ_NPMD01000011.1 GeneMarkS-2+ CDS 23235 23534 . + 0 ID=cds-WP_237585410.1;Parent=gene-CCO34_RS20910;Dbxref=GenBank:WP_237585410.1;Name=WP_237585410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS20910;product=hypothetical protein;protein_id=WP_237585410.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 23987 24919 . + . ID=gene-CCO34_RS20915;Name=CCO34_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20915;old_locus_tag=CCO34_20905 NZ_NPMD01000011.1 Protein Homology CDS 23987 24919 . + 0 ID=cds-WP_094965541.1;Parent=gene-CCO34_RS20915;Dbxref=GenBank:WP_094965541.1;Name=WP_094965541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001134314.1;locus_tag=CCO34_RS20915;product=DUF1281 domain-containing protein;protein_id=WP_094965541.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 24949 25089 . + . ID=gene-CCO34_RS25590;Name=CCO34_RS25590;end_range=25089,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25590;partial=true;pseudo=true;start_range=.,24949 NZ_NPMD01000011.1 Protein Homology CDS 24949 25089 . + 0 ID=cds-CCO34_RS25590;Parent=gene-CCO34_RS25590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=25089,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490546.1;locus_tag=CCO34_RS25590;partial=true;product=hypothetical protein;pseudo=true;start_range=.,24949;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 25103 25453 . + . ID=gene-CCO34_RS20920;Name=CCO34_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20920;old_locus_tag=CCO34_20910 NZ_NPMD01000011.1 Protein Homology CDS 25103 25453 . + 0 ID=cds-WP_000063343.1;Parent=gene-CCO34_RS20920;Dbxref=GenBank:WP_000063343.1;Name=WP_000063343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063343.1;locus_tag=CCO34_RS20920;product=hypothetical protein;protein_id=WP_000063343.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 25391 25635 . - . ID=gene-CCO34_RS26255;Name=CCO34_RS26255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26255;pseudo=true NZ_NPMD01000011.1 Protein Homology CDS 25391 25635 . - 0 ID=cds-CCO34_RS26255;Parent=gene-CCO34_RS26255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368853.1;locus_tag=CCO34_RS26255;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 25786 26718 . + . ID=gene-CCO34_RS20930;Name=CCO34_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20930;old_locus_tag=CCO34_20920 NZ_NPMD01000011.1 Protein Homology CDS 25786 26718 . + 0 ID=cds-WP_094965542.1;Parent=gene-CCO34_RS20930;Dbxref=GenBank:WP_094965542.1;Name=WP_094965542.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219394.1;locus_tag=CCO34_RS20930;product=IS110 family transposase;protein_id=WP_094965542.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 27264 27338 . + . ID=gene-CCO34_RS25895;Name=CCO34_RS25895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25895;partial=true;pseudo=true;start_range=.,27264 NZ_NPMD01000011.1 Protein Homology CDS 27264 27338 . + 0 ID=cds-CCO34_RS25895;Parent=gene-CCO34_RS25895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052644.1;locus_tag=CCO34_RS25895;partial=true;product=hypothetical protein;pseudo=true;start_range=.,27264;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 27394 27903 . + . ID=gene-CCO34_RS20940;Name=CCO34_RS20940;end_range=27903,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS20940;old_locus_tag=CCO34_20930;partial=true;pseudo=true NZ_NPMD01000011.1 Protein Homology CDS 27394 27903 . + 0 ID=cds-CCO34_RS20940;Parent=gene-CCO34_RS20940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=27903,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858331.2;locus_tag=CCO34_RS20940;partial=true;product=DNA methyltransferase;pseudo=true;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 28418 28843 . + . ID=gene-CCO34_RS20950;Name=CCO34_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20950;old_locus_tag=CCO34_20940 NZ_NPMD01000011.1 Protein Homology CDS 28418 28843 . + 0 ID=cds-WP_094965545.1;Parent=gene-CCO34_RS20950;Dbxref=GenBank:WP_094965545.1;Name=WP_094965545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=CCO34_RS20950;product=antirestriction protein;protein_id=WP_094965545.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 28890 29300 . + . ID=gene-CCO34_RS20955;Name=CCO34_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20955;old_locus_tag=CCO34_20945 NZ_NPMD01000011.1 Protein Homology CDS 28890 29300 . + 0 ID=cds-WP_094965547.1;Parent=gene-CCO34_RS20955;Dbxref=GenBank:WP_094965547.1;Name=WP_094965547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=CCO34_RS20955;product=DUF1380 family protein;protein_id=WP_094965547.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 29297 29488 . + . ID=gene-CCO34_RS20960;Name=CCO34_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20960;old_locus_tag=CCO34_20950 NZ_NPMD01000011.1 Protein Homology CDS 29297 29488 . + 0 ID=cds-WP_080172031.1;Parent=gene-CCO34_RS20960;Dbxref=GenBank:WP_080172031.1;Name=WP_080172031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=CCO34_RS20960;product=hypothetical protein;protein_id=WP_080172031.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 29502 29816 . + . ID=gene-CCO34_RS25900;Name=CCO34_RS25900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25900;old_locus_tag=CCO34_20955 NZ_NPMD01000011.1 Protein Homology CDS 29502 29816 . + 0 ID=cds-WP_235614408.1;Parent=gene-CCO34_RS25900;Dbxref=GenBank:WP_235614408.1;Name=WP_235614408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000386902.1;locus_tag=CCO34_RS25900;product=hypothetical protein;protein_id=WP_235614408.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 29816 29967 . - . ID=gene-CCO34_RS25905;Name=CCO34_RS25905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25905;partial=true;pseudo=true;start_range=.,29816 NZ_NPMD01000011.1 Protein Homology CDS 29816 29967 . - 0 ID=cds-CCO34_RS25905;Parent=gene-CCO34_RS25905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311849.1;locus_tag=CCO34_RS25905;partial=true;product=hypothetical protein;pseudo=true;start_range=.,29816;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 30482 30712 . + . ID=gene-CCO34_RS20975;Name=CCO34_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20975;old_locus_tag=CCO34_20965 NZ_NPMD01000011.1 Protein Homology CDS 30482 30712 . + 0 ID=cds-WP_058108854.1;Parent=gene-CCO34_RS20975;Dbxref=GenBank:WP_058108854.1;Name=WP_058108854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052652.1;locus_tag=CCO34_RS20975;product=hypothetical protein;protein_id=WP_058108854.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 30754 30987 . + . ID=gene-CCO34_RS20980;Name=CCO34_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20980;old_locus_tag=CCO34_20970 NZ_NPMD01000011.1 Protein Homology CDS 30754 30987 . + 0 ID=cds-WP_031570398.1;Parent=gene-CCO34_RS20980;Dbxref=GenBank:WP_031570398.1;Name=WP_031570398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654057.1;locus_tag=CCO34_RS20980;product=DUF905 domain-containing protein;protein_id=WP_031570398.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 31056 31502 . + . ID=gene-CCO34_RS20985;Name=CCO34_RS20985;end_range=31502,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS20985;old_locus_tag=CCO34_20975;partial=true;pseudo=true NZ_NPMD01000011.1 Protein Homology CDS 31056 31502 . + 0 ID=cds-CCO34_RS20985;Parent=gene-CCO34_RS20985;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=31502,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052657.1;locus_tag=CCO34_RS20985;partial=true;product=ParB/Srx family N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 31573 32778 . - . ID=gene-CCO34_RS20990;Name=CCO34_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20990;old_locus_tag=CCO34_20980 NZ_NPMD01000011.1 Protein Homology CDS 31573 32778 . - 0 ID=cds-WP_176452914.1;Parent=gene-CCO34_RS20990;Dbxref=GenBank:WP_176452914.1;Name=WP_176452914.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669153.1;locus_tag=CCO34_RS20990;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_176452914.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 32837 33241 . + . ID=gene-CCO34_RS20995;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=CCO34_RS20995;old_locus_tag=CCO34_20985 NZ_NPMD01000011.1 Protein Homology CDS 32837 33241 . + 0 ID=cds-WP_071055695.1;Parent=gene-CCO34_RS20995;Dbxref=GenBank:WP_071055695.1;Name=WP_071055695.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1;locus_tag=CCO34_RS20995;product=IS200/IS605 family transposase;protein_id=WP_071055695.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 33318 34832 . + . ID=gene-CCO34_RS25695;Name=CCO34_RS25695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25695;partial=true;pseudo=true;start_range=.,33318 NZ_NPMD01000011.1 Protein Homology CDS 33318 34832 . + 0 ID=cds-CCO34_RS25695;Parent=gene-CCO34_RS25695;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052657.1;locus_tag=CCO34_RS25695;partial=true;product=ParB/RepB/Spo0J family partition protein;pseudo=true;start_range=.,33318;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 34887 35321 . + . ID=gene-CCO34_RS21015;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=CCO34_RS21015;old_locus_tag=CCO34_21005 NZ_NPMD01000011.1 Protein Homology CDS 34887 35321 . + 0 ID=cds-WP_058108853.1;Parent=gene-CCO34_RS21015;Dbxref=GenBank:WP_058108853.1;Name=WP_058108853.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=CCO34_RS21015;product=conjugation system SOS inhibitor PsiB;protein_id=WP_058108853.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 35318 36037 . + . ID=gene-CCO34_RS21020;Name=CCO34_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21020;old_locus_tag=CCO34_21010 NZ_NPMD01000011.1 Protein Homology CDS 35318 36037 . + 0 ID=cds-WP_080172028.1;Parent=gene-CCO34_RS21020;Dbxref=GenBank:WP_080172028.1;Name=WP_080172028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001763821.1;locus_tag=CCO34_RS21020;product=plasmid SOS inhibition protein A;protein_id=WP_080172028.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 36253 36405 . + . ID=gene-CCO34_RS25910;Name=CCO34_RS25910;end_range=36405,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25910;partial=true;pseudo=true NZ_NPMD01000011.1 Protein Homology CDS 36253 36405 . + 0 ID=cds-CCO34_RS25910;Parent=gene-CCO34_RS25910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=36405,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=CCO34_RS25910;partial=true;product=DUF5431 family protein;pseudo=true;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 36350 36472 . + . ID=gene-CCO34_RS21025;Name=CCO34_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21025;old_locus_tag=CCO34_21015 NZ_NPMD01000011.1 Protein Homology CDS 36350 36472 . + 0 ID=cds-WP_272897162.1;Parent=gene-CCO34_RS21025;Dbxref=GenBank:WP_272897162.1;Name=WP_272897162.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118124.1;locus_tag=CCO34_RS21025;product=Hok/Gef family protein;protein_id=WP_272897162.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 36748 37036 . - . ID=gene-CCO34_RS25600;Name=CCO34_RS25600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25600;partial=true;pseudo=true;start_range=.,36748 NZ_NPMD01000011.1 Protein Homology CDS 36748 37036 . - 0 ID=cds-CCO34_RS25600;Parent=gene-CCO34_RS25600;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358895.1;locus_tag=CCO34_RS25600;partial=true;product=hypothetical protein;pseudo=true;start_range=.,36748;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 37123 37329 . + . ID=gene-CCO34_RS25915;Name=CCO34_RS25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25915;old_locus_tag=CCO34_21025 NZ_NPMD01000011.1 Protein Homology CDS 37123 37329 . + 0 ID=cds-WP_094965549.1;Parent=gene-CCO34_RS25915;Dbxref=GenBank:WP_094965549.1;Name=WP_094965549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=CCO34_RS25915;product=single-stranded DNA-binding protein;protein_id=WP_094965549.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 37354 37641 . + . ID=gene-CCO34_RS21040;Name=CCO34_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21040;old_locus_tag=CCO34_21030 NZ_NPMD01000011.1 Protein Homology CDS 37354 37641 . + 0 ID=cds-WP_094965551.1;Parent=gene-CCO34_RS21040;Dbxref=GenBank:WP_094965551.1;Name=WP_094965551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825190.1;locus_tag=CCO34_RS21040;product=hypothetical protein;protein_id=WP_094965551.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 37760 38581 . + . ID=gene-CCO34_RS21045;Name=CCO34_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21045;old_locus_tag=CCO34_21035 NZ_NPMD01000011.1 Protein Homology CDS 37760 38581 . + 0 ID=cds-WP_140428479.1;Parent=gene-CCO34_RS21045;Dbxref=GenBank:WP_140428479.1;Name=WP_140428479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=CCO34_RS21045;product=DUF932 domain-containing protein;protein_id=WP_140428479.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 38859 39311 . - . ID=gene-CCO34_RS21050;Name=CCO34_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21050;old_locus_tag=CCO34_21040 NZ_NPMD01000011.1 Protein Homology CDS 38859 39311 . - 0 ID=cds-WP_058108535.1;Parent=gene-CCO34_RS21050;Dbxref=GenBank:WP_058108535.1;Name=WP_058108535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469955.1;locus_tag=CCO34_RS21050;product=transglycosylase SLT domain-containing protein;protein_id=WP_058108535.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 39823 40218 . + . ID=gene-CCO34_RS21060;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=CCO34_RS21060;old_locus_tag=CCO34_21050 NZ_NPMD01000011.1 Protein Homology CDS 39823 40218 . + 0 ID=cds-WP_001558305.1;Parent=gene-CCO34_RS21060;Dbxref=GenBank:WP_001558305.1;Name=WP_001558305.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137963.1;locus_tag=CCO34_RS21060;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_001558305.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 40379 41143 . + . ID=gene-CCO34_RS21065;Name=CCO34_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21065;old_locus_tag=CCO34_21055 NZ_NPMD01000011.1 Protein Homology CDS 40379 41143 . + 0 ID=cds-WP_094965553.1;Parent=gene-CCO34_RS21065;Dbxref=GenBank:WP_094965553.1;Name=WP_094965553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001558304.1;locus_tag=CCO34_RS21065;product=hypothetical protein;protein_id=WP_094965553.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 41283 41432 . + . ID=gene-CCO34_RS21070;Name=CCO34_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21070;old_locus_tag=CCO34_21060 NZ_NPMD01000011.1 Protein Homology CDS 41283 41432 . + 0 ID=cds-WP_001401982.1;Parent=gene-CCO34_RS21070;Dbxref=GenBank:WP_001401982.1;Name=WP_001401982.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF017333.6;locus_tag=CCO34_RS21070;product=TraY domain-containing protein;protein_id=WP_001401982.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 41730 42101 . + . ID=gene-CCO34_RS21075;Name=CCO34_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21075;old_locus_tag=CCO34_21065 NZ_NPMD01000011.1 Protein Homology CDS 41730 42101 . + 0 ID=cds-WP_094965554.1;Parent=gene-CCO34_RS21075;Dbxref=GenBank:WP_094965554.1;Name=WP_094965554.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744146.1;locus_tag=CCO34_RS21075;product=type IV conjugative transfer system pilin TraA;protein_id=WP_094965554.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 42132 42431 . + . ID=gene-CCO34_RS21080;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=CCO34_RS21080;old_locus_tag=CCO34_21070 NZ_NPMD01000011.1 Protein Homology CDS 42132 42431 . + 0 ID=cds-WP_044127995.1;Parent=gene-CCO34_RS21080;Dbxref=GenBank:WP_044127995.1;Name=WP_044127995.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204091.1;locus_tag=CCO34_RS21080;product=type IV conjugative transfer system protein TraL;protein_id=WP_044127995.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 42442 43020 . + . ID=gene-CCO34_RS21085;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=CCO34_RS21085;old_locus_tag=CCO34_21075 NZ_NPMD01000011.1 Protein Homology CDS 42442 43020 . + 0 ID=cds-WP_033549278.1;Parent=gene-CCO34_RS21085;Dbxref=GenBank:WP_033549278.1;Name=WP_033549278.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365871.1;locus_tag=CCO34_RS21085;product=type IV conjugative transfer system protein TraE;protein_id=WP_033549278.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 42995 43774 . + . ID=gene-CCO34_RS21090;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=CCO34_RS21090;old_locus_tag=CCO34_21080 NZ_NPMD01000011.1 Protein Homology CDS 42995 43774 . + 0 ID=cds-WP_094965555.1;Parent=gene-CCO34_RS21090;Dbxref=GenBank:WP_094965555.1;Name=WP_094965555.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227817.1;locus_tag=CCO34_RS21090;product=F-type conjugal transfer protein TraK;protein_id=WP_094965555.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 43767 45101 . + . ID=gene-CCO34_RS21095;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=CCO34_RS21095;old_locus_tag=CCO34_21085 NZ_NPMD01000011.1 Protein Homology CDS 43767 45101 . + 0 ID=cds-WP_094965556.1;Parent=gene-CCO34_RS21095;Dbxref=GenBank:WP_094965556.1;Name=WP_094965556.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401978.1;locus_tag=CCO34_RS21095;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_094965556.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 45112 45624 . + . ID=gene-CCO34_RS21100;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=CCO34_RS21100;old_locus_tag=CCO34_21090 NZ_NPMD01000011.1 Protein Homology CDS 45112 45624 . + 0 ID=cds-WP_094965558.1;Parent=gene-CCO34_RS21100;Dbxref=GenBank:WP_094965558.1;Name=WP_094965558.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000699800.1;locus_tag=CCO34_RS21100;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_094965558.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 45621 48260 . + . ID=gene-CCO34_RS21105;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=CCO34_RS21105;old_locus_tag=CCO34_21095 NZ_NPMD01000011.1 Protein Homology CDS 45621 48260 . + 0 ID=cds-WP_094965559.1;Parent=gene-CCO34_RS21105;Dbxref=GenBank:WP_094965559.1;Name=WP_094965559.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000085829.1;locus_tag=CCO34_RS21105;product=type IV secretion system protein TraC;protein_id=WP_094965559.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 48239 48658 . + . ID=gene-CCO34_RS21110;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=CCO34_RS21110;old_locus_tag=CCO34_21100 NZ_NPMD01000011.1 Protein Homology CDS 48239 48658 . + 0 ID=cds-WP_073998963.1;Parent=gene-CCO34_RS21110;Dbxref=GenBank:WP_073998963.1;Name=WP_073998963.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744139.1;locus_tag=CCO34_RS21110;product=type-F conjugative transfer system protein TrbI;protein_id=WP_073998963.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 48661 48885 . + . ID=gene-CCO34_RS21115;Name=CCO34_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21115;old_locus_tag=CCO34_21105 NZ_NPMD01000011.1 Protein Homology CDS 48661 48885 . + 0 ID=cds-WP_094965560.1;Parent=gene-CCO34_RS21115;Dbxref=GenBank:WP_094965560.1;Name=WP_094965560.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000752802.1;locus_tag=CCO34_RS21115;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_094965560.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 48882 49499 . + . ID=gene-CCO34_RS21120;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=CCO34_RS21120;old_locus_tag=CCO34_21110 NZ_NPMD01000011.1 Protein Homology CDS 48882 49499 . + 0 ID=cds-WP_094965561.1;Parent=gene-CCO34_RS21120;Dbxref=GenBank:WP_094965561.1;Name=WP_094965561.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871842.1;locus_tag=CCO34_RS21120;product=type-F conjugative transfer system protein TraW;protein_id=WP_094965561.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 49523 50494 . + . ID=gene-CCO34_RS21125;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=CCO34_RS21125;old_locus_tag=CCO34_21115 NZ_NPMD01000011.1 Protein Homology CDS 49523 50494 . + 0 ID=cds-WP_423825526.1;Parent=gene-CCO34_RS21125;Dbxref=GenBank:WP_423825526.1;Name=WP_423825526.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000832919.1;locus_tag=CCO34_RS21125;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_423825526.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 50864 51976 . - . ID=gene-CCO34_RS21135;Name=CCO34_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21135;old_locus_tag=CCO34_21125 NZ_NPMD01000011.1 Protein Homology CDS 50864 51976 . - 0 ID=cds-WP_237585411.1;Parent=gene-CCO34_RS21135;Dbxref=GenBank:WP_237585411.1;Name=WP_237585411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000898915.1;locus_tag=CCO34_RS21135;product=hypothetical protein;protein_id=WP_237585411.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 52058 52663 . + . ID=gene-CCO34_RS21140;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=CCO34_RS21140;old_locus_tag=CCO34_21130 NZ_NPMD01000011.1 Protein Homology CDS 52058 52663 . + 0 ID=cds-WP_237585412.1;Parent=gene-CCO34_RS21140;Dbxref=GenBank:WP_237585412.1;Name=WP_237585412.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000265504.1;locus_tag=CCO34_RS21140;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_237585412.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 52660 54480 . + . ID=gene-CCO34_RS21145;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=CCO34_RS21145;old_locus_tag=CCO34_21135 NZ_NPMD01000011.1 Protein Homology CDS 52660 54480 . + 0 ID=cds-WP_094965565.1;Parent=gene-CCO34_RS21145;Dbxref=GenBank:WP_094965565.1;Name=WP_094965565.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744129.1;locus_tag=CCO34_RS21145;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_094965565.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 54482 55267 . + . ID=gene-CCO34_RS21150;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=CCO34_RS21150;old_locus_tag=CCO34_21140 NZ_NPMD01000011.1 Protein Homology CDS 54482 55267 . + 0 ID=cds-WP_094965567.1;Parent=gene-CCO34_RS21150;Dbxref=GenBank:WP_094965567.1;Name=WP_094965567.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247977.1;locus_tag=CCO34_RS21150;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_094965567.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 55285 55557 . + . ID=gene-CCO34_RS21155;Name=CCO34_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21155;old_locus_tag=CCO34_21145 NZ_NPMD01000011.1 Protein Homology CDS 55285 55557 . + 0 ID=cds-WP_080171895.1;Parent=gene-CCO34_RS21155;Dbxref=GenBank:WP_080171895.1;Name=WP_080171895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196431.1;locus_tag=CCO34_RS21155;product=hypothetical protein;protein_id=WP_080171895.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 55559 56137 . + . ID=gene-CCO34_RS21160;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=CCO34_RS21160;old_locus_tag=CCO34_21150 NZ_NPMD01000011.1 Protein Homology CDS 55559 56137 . + 0 ID=cds-WP_094965569.1;Parent=gene-CCO34_RS21160;Dbxref=GenBank:WP_094965569.1;Name=WP_094965569.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000265824.1;locus_tag=CCO34_RS21160;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_094965569.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 56134 56523 . + . ID=gene-CCO34_RS21165;Name=CCO34_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21165;old_locus_tag=CCO34_21155 NZ_NPMD01000011.1 Protein Homology CDS 56134 56523 . + 0 ID=cds-WP_094965571.1;Parent=gene-CCO34_RS21165;Dbxref=GenBank:WP_094965571.1;Name=WP_094965571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001202475.1;locus_tag=CCO34_RS21165;product=hypothetical protein;protein_id=WP_094965571.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 56774 57271 . + . ID=gene-CCO34_RS21170;Name=CCO34_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21170;old_locus_tag=CCO34_21160 NZ_NPMD01000011.1 GeneMarkS-2+ CDS 56774 57271 . + 0 ID=cds-WP_094965572.1;Parent=gene-CCO34_RS21170;Dbxref=GenBank:WP_094965572.1;Name=WP_094965572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS21170;product=hypothetical protein;protein_id=WP_094965572.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 57737 59101 . + . ID=gene-CCO34_RS21180;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=CCO34_RS21180;old_locus_tag=CCO34_21170 NZ_NPMD01000011.1 Protein Homology CDS 57737 59101 . + 0 ID=cds-WP_094965628.1;Parent=gene-CCO34_RS21180;Dbxref=GenBank:WP_094965628.1;Name=WP_094965628.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012564993.1;locus_tag=CCO34_RS21180;product=conjugal transfer pilus assembly protein TraH;protein_id=WP_094965628.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 59101 62010 . + . ID=gene-CCO34_RS21185;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=CCO34_RS21185;old_locus_tag=CCO34_21175 NZ_NPMD01000011.1 Protein Homology CDS 59101 62010 . + 0 ID=cds-WP_094965575.1;Parent=gene-CCO34_RS21185;Dbxref=GenBank:WP_094965575.1;Name=WP_094965575.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001473129.1;locus_tag=CCO34_RS21185;product=conjugal transfer mating-pair stabilization protein TraG;protein_id=WP_094965575.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 62025 62672 . + . ID=gene-CCO34_RS21190;Name=CCO34_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21190;old_locus_tag=CCO34_21180 NZ_NPMD01000011.1 Protein Homology CDS 62025 62672 . + 0 ID=cds-WP_094965577.1;Parent=gene-CCO34_RS21190;Dbxref=GenBank:WP_094965577.1;Name=WP_094965577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401960.1;locus_tag=CCO34_RS21190;product=hypothetical protein;protein_id=WP_094965577.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 62744 63481 . + . ID=gene-CCO34_RS21195;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=CCO34_RS21195;old_locus_tag=CCO34_21185 NZ_NPMD01000011.1 Protein Homology CDS 62744 63481 . + 0 ID=cds-WP_094965578.1;Parent=gene-CCO34_RS21195;Dbxref=GenBank:WP_094965578.1;Name=WP_094965578.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926073.1;locus_tag=CCO34_RS21195;product=conjugal transfer complement resistance protein TraT;protein_id=WP_094965578.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 63952 64320 . + . ID=gene-CCO34_RS21200;Name=CCO34_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21200;old_locus_tag=CCO34_21190 NZ_NPMD01000011.1 Protein Homology CDS 63952 64320 . + 0 ID=cds-WP_228395591.1;Parent=gene-CCO34_RS21200;Dbxref=GenBank:WP_228395591.1;Name=WP_228395591.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022337.6;locus_tag=CCO34_RS21200;product=DUF2726 domain-containing protein;protein_id=WP_228395591.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 64362 66548 . + . ID=gene-CCO34_RS21205;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=CCO34_RS21205;old_locus_tag=CCO34_21195 NZ_NPMD01000011.1 Protein Homology CDS 64362 66548 . + 0 ID=cds-WP_094965581.1;Parent=gene-CCO34_RS21205;Dbxref=GenBank:WP_094965581.1;Name=WP_094965581.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001558279.1;locus_tag=CCO34_RS21205;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_094965581.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 66548 71764 . + . ID=gene-CCO34_RS21210;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=CCO34_RS21210;old_locus_tag=CCO34_21200 NZ_NPMD01000011.1 Protein Homology CDS 66548 71764 . + 0 ID=cds-WP_094965582.1;Parent=gene-CCO34_RS21210;Dbxref=GenBank:WP_094965582.1;Name=WP_094965582.1;gbkey=CDS;gene=traI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001481149.1;locus_tag=CCO34_RS21210;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_094965582.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 71912 72475 . + . ID=gene-CCO34_RS21215;Name=CCO34_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21215;old_locus_tag=CCO34_21205 NZ_NPMD01000011.1 Protein Homology CDS 71912 72475 . + 0 ID=cds-WP_044128031.1;Parent=gene-CCO34_RS21215;Dbxref=GenBank:WP_044128031.1;Name=WP_044128031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000139375.1;locus_tag=CCO34_RS21215;product=fertility inhibition protein FinO;protein_id=WP_044128031.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 72971 73915 . + . ID=gene-CCO34_RS21220;Name=CCO34_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21220;old_locus_tag=CCO34_21210 NZ_NPMD01000011.1 Protein Homology CDS 72971 73915 . + 0 ID=cds-WP_237585413.1;Parent=gene-CCO34_RS21220;Dbxref=GenBank:WP_237585413.1;Name=WP_237585413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308024.1;locus_tag=CCO34_RS21220;product=hypothetical protein;protein_id=WP_237585413.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 74298 74447 . + . ID=gene-CCO34_RS21230;Name=CCO34_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21230;old_locus_tag=CCO34_21220 NZ_NPMD01000011.1 Protein Homology CDS 74298 74447 . + 0 ID=cds-WP_114064529.1;Parent=gene-CCO34_RS21230;Dbxref=GenBank:WP_114064529.1;Name=WP_114064529.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013968.6;locus_tag=CCO34_RS21230;product=Hok/Gef family protein;protein_id=WP_114064529.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 74777 75067 . + . ID=gene-CCO34_RS21235;Name=CCO34_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21235;old_locus_tag=CCO34_21225 NZ_NPMD01000011.1 Protein Homology CDS 74777 75067 . + 0 ID=cds-WP_044128035.1;Parent=gene-CCO34_RS21235;Dbxref=GenBank:WP_044128035.1;Name=WP_044128035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100678.1;locus_tag=CCO34_RS21235;product=DUF1778 domain-containing protein;protein_id=WP_044128035.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 75058 75540 . + . ID=gene-CCO34_RS21240;Name=CCO34_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21240;old_locus_tag=CCO34_21230 NZ_NPMD01000011.1 Protein Homology CDS 75058 75540 . + 0 ID=cds-WP_080171907.1;Parent=gene-CCO34_RS21240;Dbxref=GenBank:WP_080171907.1;Name=WP_080171907.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858192.1;locus_tag=CCO34_RS21240;product=GNAT family N-acetyltransferase;protein_id=WP_080171907.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 75823 76080 . + . ID=gene-CCO34_RS21245;Name=CCO34_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21245;old_locus_tag=CCO34_21235 NZ_NPMD01000011.1 Protein Homology CDS 75823 76080 . + 0 ID=cds-WP_044128039.1;Parent=gene-CCO34_RS21245;Dbxref=GenBank:WP_044128039.1;Name=WP_044128039.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083824.1;locus_tag=CCO34_RS21245;product=replication regulatory protein RepA;protein_id=WP_044128039.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 76312 76386 . + . ID=gene-CCO34_RS21255;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=CCO34_RS21255;old_locus_tag=CCO34_21245 NZ_NPMD01000011.1 Protein Homology CDS 76312 76386 . + 0 ID=cds-WP_073998968.1;Parent=gene-CCO34_RS21255;Dbxref=GenBank:WP_073998968.1;Name=WP_073998968.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370046.1;locus_tag=CCO34_RS21255;product=RepA leader peptide Tap;protein_id=WP_073998968.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 76379 77236 . + . ID=gene-CCO34_RS21260;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=CCO34_RS21260;old_locus_tag=CCO34_21250 NZ_NPMD01000011.1 Protein Homology CDS 76379 77236 . + 0 ID=cds-WP_139782334.1;Parent=gene-CCO34_RS21260;Dbxref=GenBank:WP_139782334.1;Name=WP_139782334.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=CCO34_RS21260;product=incFII family plasmid replication initiator RepA;protein_id=WP_139782334.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 78450 79089 . + . ID=gene-CCO34_RS21270;Name=CCO34_RS21270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS21270;old_locus_tag=CCO34_21260;pseudo=true NZ_NPMD01000011.1 Protein Homology CDS 78450 79089 . + 0 ID=cds-CCO34_RS21270;Parent=gene-CCO34_RS21270;Note=frameshifted;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470632.1;locus_tag=CCO34_RS21270;product=recombinase family protein;pseudo=true;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 79364 80800 . + . ID=gene-CCO34_RS21275;Name=CCO34_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21275;old_locus_tag=CCO34_21265 NZ_NPMD01000011.1 Protein Homology CDS 79364 80800 . + 0 ID=cds-WP_094965584.1;Parent=gene-CCO34_RS21275;Dbxref=GenBank:WP_094965584.1;Name=WP_094965584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000291498.1;locus_tag=CCO34_RS21275;product=radical SAM/SPASM domain-containing protein;protein_id=WP_094965584.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 80988 81350 . + . ID=gene-CCO34_RS21280;Name=CCO34_RS21280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS21280;old_locus_tag=CCO34_21270;partial=true;pseudo=true;start_range=.,80988 NZ_NPMD01000011.1 Protein Homology CDS 80988 81350 . + 0 ID=cds-CCO34_RS21280;Parent=gene-CCO34_RS21280;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722340.1;locus_tag=CCO34_RS21280;partial=true;product=recombinase family protein;pseudo=true;start_range=.,80988;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 81854 82513 . + . ID=gene-CCO34_RS21285;Name=CCO34_RS21285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS21285;old_locus_tag=CCO34_21275;partial=true;pseudo=true;start_range=.,81854 NZ_NPMD01000011.1 Protein Homology CDS 81854 82513 . + 0 ID=cds-CCO34_RS21285;Parent=gene-CCO34_RS21285;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=CCO34_RS21285;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,81854;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 82695 83351 . - . ID=gene-CCO34_RS21290;Name=CCO34_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21290;old_locus_tag=CCO34_21280 NZ_NPMD01000011.1 Protein Homology CDS 82695 83351 . - 0 ID=cds-WP_094965585.1;Parent=gene-CCO34_RS21290;Dbxref=GenBank:WP_094965585.1;Name=WP_094965585.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015250.6;locus_tag=CCO34_RS21290;product=hypothetical protein;protein_id=WP_094965585.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 84162 84278 . + . ID=gene-CCO34_RS21295;Name=CCO34_RS21295;end_range=84278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS21295;old_locus_tag=CCO34_21285;partial=true;pseudo=true NZ_NPMD01000011.1 Protein Homology CDS 84162 84278 . + 0 ID=cds-CCO34_RS21295;Parent=gene-CCO34_RS21295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=84278,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=CCO34_RS21295;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 84504 85520 . - . ID=gene-CCO34_RS21300;Name=CCO34_RS21300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS21300;old_locus_tag=CCO34_21290;pseudo=true NZ_NPMD01000011.1 Protein Homology CDS 84504 85520 . - 0 ID=cds-CCO34_RS21300;Parent=gene-CCO34_RS21300;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032444102.1;locus_tag=CCO34_RS21300;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 85587 86267 . + . ID=gene-CCO34_RS21305;Name=CCO34_RS21305;end_range=86267,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS21305;old_locus_tag=CCO34_21295;partial=true;pseudo=true;start_range=.,85587 NZ_NPMD01000011.1 Protein Homology CDS 85587 86267 . + 0 ID=cds-CCO34_RS21305;Parent=gene-CCO34_RS21305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=86267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=CCO34_RS21305;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,85587;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 86312 86965 . - . ID=gene-CCO34_RS21310;Name=CCO34_RS21310;end_range=86965,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS21310;old_locus_tag=CCO34_21300;partial=true;pseudo=true;start_range=.,86312 NZ_NPMD01000011.1 Protein Homology CDS 86312 86965 . - 0 ID=cds-CCO34_RS21310;Parent=gene-CCO34_RS21310;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=86965,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=CCO34_RS21310;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,86312;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 86932 87150 . - . ID=gene-CCO34_RS26260;Name=CCO34_RS26260;end_range=87150,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26260;partial=true;pseudo=true NZ_NPMD01000011.1 Protein Homology CDS 86932 87150 . - 0 ID=cds-CCO34_RS26260;Parent=gene-CCO34_RS26260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=87150,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=CCO34_RS26260;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 87166 87428 . - . ID=gene-CCO34_RS21320;Name=CCO34_RS21320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS21320;old_locus_tag=CCO34_21310;partial=true;pseudo=true;start_range=.,87166 NZ_NPMD01000011.1 Protein Homology CDS 87166 87428 . - 0 ID=cds-CCO34_RS21320;Parent=gene-CCO34_RS21320;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO34_RS21320;partial=true;product=transposase;pseudo=true;start_range=.,87166;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 88298 88633 . + . ID=gene-CCO34_RS21330;Name=CCO34_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21330;old_locus_tag=CCO34_21320 NZ_NPMD01000011.1 Protein Homology CDS 88298 88633 . + 0 ID=cds-WP_080171867.1;Parent=gene-CCO34_RS21330;Dbxref=GenBank:WP_080171867.1;Name=WP_080171867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001558345.1;locus_tag=CCO34_RS21330;product=adhesin biosynthesis transcription regulatory family protein;protein_id=WP_080171867.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 88630 89163 . + . ID=gene-CCO34_RS21335;Name=CCO34_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21335;old_locus_tag=CCO34_21325 NZ_NPMD01000011.1 Protein Homology CDS 88630 89163 . + 0 ID=cds-WP_094965590.1;Parent=gene-CCO34_RS21335;Dbxref=GenBank:WP_094965590.1;Name=WP_094965590.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000721294.1;locus_tag=CCO34_RS21335;product=fimbrial protein;protein_id=WP_094965590.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 89172 91622 . + . ID=gene-CCO34_RS21340;Name=faeD;gbkey=Gene;gene=faeD;gene_biotype=protein_coding;locus_tag=CCO34_RS21340;old_locus_tag=CCO34_21330 NZ_NPMD01000011.1 Protein Homology CDS 89172 91622 . + 0 ID=cds-WP_094965591.1;Parent=gene-CCO34_RS21340;Dbxref=GenBank:WP_094965591.1;Name=WP_094965591.1;gbkey=CDS;gene=faeD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000761061.1;locus_tag=CCO34_RS21340;product=F4 (K88) fimbrial usher FaeD;protein_id=WP_094965591.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 91645 92433 . + . ID=gene-CCO34_RS21345;Name=CCO34_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21345;old_locus_tag=CCO34_21335 NZ_NPMD01000011.1 Protein Homology CDS 91645 92433 . + 0 ID=cds-WP_094965630.1;Parent=gene-CCO34_RS21345;Dbxref=GenBank:WP_094965630.1;Name=WP_094965630.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988789.1;locus_tag=CCO34_RS21345;product=fimbria/pilus periplasmic chaperone;protein_id=WP_094965630.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 92461 92955 . + . ID=gene-CCO34_RS21350;Name=CCO34_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21350;old_locus_tag=CCO34_21340 NZ_NPMD01000011.1 Protein Homology CDS 92461 92955 . + 0 ID=cds-WP_094965592.1;Parent=gene-CCO34_RS21350;Dbxref=GenBank:WP_094965592.1;Name=WP_094965592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543288.1;locus_tag=CCO34_RS21350;product=DUF5462 family protein;protein_id=WP_094965592.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 93189 93956 . + . ID=gene-CCO34_RS21355;Name=CCO34_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21355;old_locus_tag=CCO34_21345 NZ_NPMD01000011.1 Protein Homology CDS 93189 93956 . + 0 ID=cds-WP_094965594.1;Parent=gene-CCO34_RS21355;Dbxref=GenBank:WP_094965594.1;Name=WP_094965594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543287.1;locus_tag=CCO34_RS21355;product=hypothetical protein;protein_id=WP_094965594.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 94191 94988 . + . ID=gene-CCO34_RS21360;Name=faeH;gbkey=Gene;gene=faeH;gene_biotype=protein_coding;locus_tag=CCO34_RS21360;old_locus_tag=CCO34_21350 NZ_NPMD01000011.1 Protein Homology CDS 94191 94988 . + 0 ID=cds-WP_094965596.1;Parent=gene-CCO34_RS21360;Dbxref=GenBank:WP_094965596.1;Name=WP_094965596.1;gbkey=CDS;gene=faeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704720.1;locus_tag=CCO34_RS21360;product=F4 (K88) fimbria minor subunit FaeH;protein_id=WP_094965596.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 95016 95780 . + . ID=gene-CCO34_RS21365;Name=CCO34_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21365;old_locus_tag=CCO34_21355 NZ_NPMD01000011.1 Protein Homology CDS 95016 95780 . + 0 ID=cds-WP_058108432.1;Parent=gene-CCO34_RS21365;Dbxref=GenBank:WP_058108432.1;Name=WP_058108432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001377907.1;locus_tag=CCO34_RS21365;product=fimbrial protein;protein_id=WP_058108432.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 95767 96156 . + . ID=gene-CCO34_RS25925;Name=CCO34_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25925 NZ_NPMD01000011.1 GeneMarkS-2+ CDS 95767 96156 . + 0 ID=cds-WP_237585414.1;Parent=gene-CCO34_RS25925;Dbxref=GenBank:WP_237585414.1;Name=WP_237585414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25925;product=hypothetical protein;protein_id=WP_237585414.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 96071 96790 . + . ID=gene-CCO34_RS21375;Name=CCO34_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21375;old_locus_tag=CCO34_21365 NZ_NPMD01000011.1 Protein Homology CDS 96071 96790 . + 0 ID=cds-WP_094965597.1;Parent=gene-CCO34_RS21375;Dbxref=GenBank:WP_094965597.1;Name=WP_094965597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001558333.1;locus_tag=CCO34_RS21375;product=fimbrial protein;protein_id=WP_094965597.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 96911 97474 . + . ID=gene-CCO34_RS21380;Name=CCO34_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21380;old_locus_tag=CCO34_21370 NZ_NPMD01000011.1 Protein Homology CDS 96911 97474 . + 0 ID=cds-WP_237585415.1;Parent=gene-CCO34_RS21380;Dbxref=GenBank:WP_237585415.1;Name=WP_237585415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=CCO34_RS21380;product=hypothetical protein;protein_id=WP_237585415.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 97615 98478 . + . ID=gene-CCO34_RS21385;Name=CCO34_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21385;old_locus_tag=CCO34_21375 NZ_NPMD01000011.1 Protein Homology CDS 97615 98478 . + 0 ID=cds-WP_140428480.1;Parent=gene-CCO34_RS21385;Dbxref=GenBank:WP_140428480.1;Name=WP_140428480.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014485.6;locus_tag=CCO34_RS21385;product=fimbrial;protein_id=WP_140428480.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 98520 102467 . + . ID=gene-CCO34_RS21390;Name=CCO34_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21390;old_locus_tag=CCO34_21380 NZ_NPMD01000011.1 Protein Homology CDS 98520 102467 . + 0 ID=cds-WP_094965600.1;Parent=gene-CCO34_RS21390;Dbxref=GenBank:WP_094965600.1;Name=WP_094965600.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001627241.1;locus_tag=CCO34_RS21390;product=S6 family peptidase;protein_id=WP_094965600.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 102514 102690 . + . ID=gene-CCO34_RS21395;Name=CCO34_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21395;old_locus_tag=CCO34_21385 NZ_NPMD01000011.1 Protein Homology CDS 102514 102690 . + 0 ID=cds-WP_237585421.1;Parent=gene-CCO34_RS21395;Dbxref=GenBank:WP_237585421.1;Name=WP_237585421.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF016581.6;locus_tag=CCO34_RS21395;product=FaeA/PapI family transcriptional regulator;protein_id=WP_237585421.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 102953 104662 . + . ID=gene-CCO34_RS21400;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=CCO34_RS21400;old_locus_tag=CCO34_21390 NZ_NPMD01000011.1 Protein Homology CDS 102953 104662 . + 0 ID=cds-WP_094965602.1;Parent=gene-CCO34_RS21400;Dbxref=GenBank:WP_094965602.1;Name=WP_094965602.1;Ontology_term=GO:0009306;gbkey=CDS;gene=sctC;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000848100.1;locus_tag=CCO34_RS21400;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_094965602.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 104652 105782 . + . ID=gene-CCO34_RS21405;Name=sctW;gbkey=Gene;gene=sctW;gene_biotype=protein_coding;locus_tag=CCO34_RS21405;old_locus_tag=CCO34_21395 NZ_NPMD01000011.1 Protein Homology CDS 104652 105782 . + 0 ID=cds-WP_077917404.1;Parent=gene-CCO34_RS21405;Dbxref=GenBank:WP_077917404.1;Name=WP_077917404.1;Ontology_term=GO:0030254,GO:0050709,GO:0009986;gbkey=CDS;gene=sctW;go_component=cell surface|0009986||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA,negative regulation of protein secretion|0050709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429757.1;locus_tag=CCO34_RS21405;product=type III secretion system gatekeeper subunit SctW;protein_id=WP_077917404.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 105776 107842 . + . ID=gene-CCO34_RS21410;Name=CCO34_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21410;old_locus_tag=CCO34_21400 NZ_NPMD01000011.1 Protein Homology CDS 105776 107842 . + 0 ID=cds-WP_094965603.1;Parent=gene-CCO34_RS21410;Dbxref=GenBank:WP_094965603.1;Name=WP_094965603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001603412.1;locus_tag=CCO34_RS21410;product=EscV/YscV/HrcV family type III secretion system export apparatus protein;protein_id=WP_094965603.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 107879 109171 . + . ID=gene-CCO34_RS21415;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=protein_coding;locus_tag=CCO34_RS21415;old_locus_tag=CCO34_21405 NZ_NPMD01000011.1 Protein Homology CDS 107879 109171 . + 0 ID=cds-WP_044126678.1;Parent=gene-CCO34_RS21415;Dbxref=GenBank:WP_044126678.1;Name=WP_044126678.1;gbkey=CDS;gene=sctN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001603411.1;locus_tag=CCO34_RS21415;product=type III secretion system ATPase SctN;protein_id=WP_044126678.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 109155 109622 . + . ID=gene-CCO34_RS21420;Name=CCO34_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21420;old_locus_tag=CCO34_21410 NZ_NPMD01000011.1 Protein Homology CDS 109155 109622 . + 0 ID=cds-WP_044126676.1;Parent=gene-CCO34_RS21420;Dbxref=GenBank:WP_044126676.1;Name=WP_044126676.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014181.6;locus_tag=CCO34_RS21420;product=hypothetical protein;protein_id=WP_044126676.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 109597 110418 . + . ID=gene-CCO34_RS21425;Name=CCO34_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21425;old_locus_tag=CCO34_21415 NZ_NPMD01000011.1 Protein Homology CDS 109597 110418 . + 0 ID=cds-WP_237585416.1;Parent=gene-CCO34_RS21425;Dbxref=GenBank:WP_237585416.1;Name=WP_237585416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000443822.1;locus_tag=CCO34_RS21425;product=type III secretion system needle length determinant%2C SpaN/EivJ family;protein_id=WP_237585416.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 110418 111317 . + . ID=gene-CCO34_RS21430;Name=CCO34_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21430;old_locus_tag=CCO34_21420 NZ_NPMD01000011.1 Protein Homology CDS 110418 111317 . + 0 ID=cds-WP_080171854.1;Parent=gene-CCO34_RS21430;Dbxref=GenBank:WP_080171854.1;Name=WP_080171854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050398.1;locus_tag=CCO34_RS21430;product=YscQ/HrcQ family type III secretion apparatus protein;protein_id=WP_080171854.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 111307 111972 . + . ID=gene-CCO34_RS21435;Name=CCO34_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21435;old_locus_tag=CCO34_21425 NZ_NPMD01000011.1 Protein Homology CDS 111307 111972 . + 0 ID=cds-WP_080171853.1;Parent=gene-CCO34_RS21435;Dbxref=GenBank:WP_080171853.1;Name=WP_080171853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000426583.1;locus_tag=CCO34_RS21435;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=WP_080171853.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 112003 112263 . + . ID=gene-CCO34_RS21440;Name=CCO34_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21440;old_locus_tag=CCO34_21430 NZ_NPMD01000011.1 Protein Homology CDS 112003 112263 . + 0 ID=cds-WP_031570176.1;Parent=gene-CCO34_RS21440;Dbxref=GenBank:WP_031570176.1;Name=WP_031570176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=CCO34_RS21440;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=WP_031570176.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 112268 113041 . + . ID=gene-CCO34_RS21445;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=CCO34_RS21445;old_locus_tag=CCO34_21435 NZ_NPMD01000011.1 Protein Homology CDS 112268 113041 . + 0 ID=cds-WP_031570179.1;Parent=gene-CCO34_RS21445;Dbxref=GenBank:WP_031570179.1;Name=WP_031570179.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331169.1;locus_tag=CCO34_RS21445;product=type III secretion system export apparatus subunit SctT;protein_id=WP_031570179.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 113048 114136 . + . ID=gene-CCO34_RS21450;Name=CCO34_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21450;old_locus_tag=CCO34_21440 NZ_NPMD01000011.1 Protein Homology CDS 113048 114136 . + 0 ID=cds-WP_058108441.1;Parent=gene-CCO34_RS21450;Dbxref=GenBank:WP_058108441.1;Name=WP_058108441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000016402.1;locus_tag=CCO34_RS21450;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_058108441.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 114187 114687 . + . ID=gene-CCO34_RS21455;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=CCO34_RS21455;old_locus_tag=CCO34_21445 NZ_NPMD01000011.1 Protein Homology CDS 114187 114687 . + 0 ID=cds-WP_044128150.1;Parent=gene-CCO34_RS21455;Dbxref=GenBank:WP_044128150.1;Name=WP_044128150.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368102.1;locus_tag=CCO34_RS21455;product=type III secretion system translocator chaperone SicA;protein_id=WP_044128150.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 114680 116407 . + . ID=gene-CCO34_RS21460;Name=sctE;gbkey=Gene;gene=sctE;gene_biotype=protein_coding;locus_tag=CCO34_RS21460;old_locus_tag=CCO34_21450 NZ_NPMD01000011.1 Protein Homology CDS 114680 116407 . + 0 ID=cds-WP_094965605.1;Parent=gene-CCO34_RS21460;Dbxref=GenBank:WP_094965605.1;Name=WP_094965605.1;gbkey=CDS;gene=sctE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283332.1;locus_tag=CCO34_RS21460;product=type III secretion system translocon subunit SctE;protein_id=WP_094965605.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 116437 117420 . + . ID=gene-CCO34_RS21465;Name=CCO34_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21465;old_locus_tag=CCO34_21455 NZ_NPMD01000011.1 Protein Homology CDS 116437 117420 . + 0 ID=cds-WP_140428485.1;Parent=gene-CCO34_RS21465;Dbxref=GenBank:WP_140428485.1;Name=WP_140428485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000909022.1;locus_tag=CCO34_RS21465;product=IpaC/SipC family type III secretion system effector;protein_id=WP_140428485.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 117479 118462 . + . ID=gene-CCO34_RS21470;Name=sctA;gbkey=Gene;gene=sctA;gene_biotype=protein_coding;locus_tag=CCO34_RS21470;old_locus_tag=CCO34_21460 NZ_NPMD01000011.1 Protein Homology CDS 117479 118462 . + 0 ID=cds-WP_031615763.1;Parent=gene-CCO34_RS21470;Dbxref=GenBank:WP_031615763.1;Name=WP_031615763.1;gbkey=CDS;gene=sctA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000495570.1;locus_tag=CCO34_RS21470;product=type III secretion system needle tip protein SctA;protein_id=WP_031615763.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 118543 119724 . + . ID=gene-CCO34_RS21475;Name=CCO34_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21475;old_locus_tag=CCO34_21465 NZ_NPMD01000011.1 Protein Homology CDS 118543 119724 . + 0 ID=cds-WP_094965609.1;Parent=gene-CCO34_RS21475;Dbxref=GenBank:WP_094965609.1;Name=WP_094965609.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308046.1;locus_tag=CCO34_RS21475;product=PrgH/EprH family type III secretion apparatus protein;protein_id=WP_094965609.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 119743 119991 . + . ID=gene-CCO34_RS21480;Name=CCO34_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21480;old_locus_tag=CCO34_21470 NZ_NPMD01000011.1 Protein Homology CDS 119743 119991 . + 0 ID=cds-WP_031570197.1;Parent=gene-CCO34_RS21480;Dbxref=GenBank:WP_031570197.1;Name=WP_031570197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179682.1;locus_tag=CCO34_RS21480;product=type III secretion system needle complex protein;protein_id=WP_031570197.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 120010 120309 . + . ID=gene-CCO34_RS21485;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=CCO34_RS21485;old_locus_tag=CCO34_21475 NZ_NPMD01000011.1 Protein Homology CDS 120010 120309 . + 0 ID=cds-WP_049828546.1;Parent=gene-CCO34_RS21485;Dbxref=GenBank:WP_049828546.1;Name=WP_049828546.1;gbkey=CDS;gene=sctI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606230.1;locus_tag=CCO34_RS21485;product=type III secretion system inner rod subunit SctI;protein_id=WP_049828546.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 120306 121058 . + . ID=gene-CCO34_RS21490;Name=CCO34_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21490;old_locus_tag=CCO34_21480 NZ_NPMD01000011.1 Protein Homology CDS 120306 121058 . + 0 ID=cds-WP_094965611.1;Parent=gene-CCO34_RS21490;Dbxref=GenBank:WP_094965611.1;Name=WP_094965611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603487.1;locus_tag=CCO34_RS21490;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein;protein_id=WP_094965611.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 121051 121647 . + . ID=gene-CCO34_RS21495;Name=CCO34_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21495;old_locus_tag=CCO34_21485 NZ_NPMD01000011.1 Protein Homology CDS 121051 121647 . + 0 ID=cds-WP_080171848.1;Parent=gene-CCO34_RS21495;Dbxref=GenBank:WP_080171848.1;Name=WP_080171848.1;Note=oxygen regulated%3B required for internalization into the host cell;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021031.6;locus_tag=CCO34_RS21495;product=hypothetical protein;protein_id=WP_080171848.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 121586 122284 . + . ID=gene-CCO34_RS21500;Name=CCO34_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21500;old_locus_tag=CCO34_21490 NZ_NPMD01000011.1 GeneMarkS-2+ CDS 121586 122284 . + 0 ID=cds-WP_080171847.1;Parent=gene-CCO34_RS21500;Dbxref=GenBank:WP_080171847.1;Name=WP_080171847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS21500;product=hypothetical protein;protein_id=WP_080171847.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 122376 123278 . + . ID=gene-CCO34_RS21505;Name=CCO34_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21505;old_locus_tag=CCO34_21495 NZ_NPMD01000011.1 Protein Homology CDS 122376 123278 . + 0 ID=cds-WP_094965612.1;Parent=gene-CCO34_RS21505;Dbxref=GenBank:WP_094965612.1;Name=WP_094965612.1;Ontology_term=GO:0005615;gbkey=CDS;go_component=extracellular space|0005615||IEA;inference=COORDINATES: protein motif:HMM:NF020684.6;locus_tag=CCO34_RS21505;product=type III secretion system effector BopA family protein;protein_id=WP_094965612.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 123475 125172 . + . ID=gene-CCO34_RS25415;Name=CCO34_RS25415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25415 NZ_NPMD01000011.1 Protein Homology CDS 123475 125172 . + 0 ID=cds-WP_140428481.1;Parent=gene-CCO34_RS25415;Dbxref=GenBank:WP_140428481.1;Name=WP_140428481.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: protein motif:HMM:NF012330.6;locus_tag=CCO34_RS25415;product=protein-tyrosine phosphatase family protein;protein_id=WP_140428481.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 125230 125613 . + . ID=gene-CCO34_RS21515;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=CCO34_RS21515;old_locus_tag=CCO34_21505 NZ_NPMD01000011.1 Protein Homology CDS 125230 125613 . + 0 ID=cds-WP_094965613.1;Parent=gene-CCO34_RS21515;Dbxref=GenBank:WP_094965613.1;Name=WP_094965613.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000284258.1;locus_tag=CCO34_RS21515;product=chaperone SicP;protein_id=WP_094965613.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 126003 126239 . + . ID=gene-CCO34_RS25420;Name=CCO34_RS25420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25420 NZ_NPMD01000011.1 GeneMarkS-2+ CDS 126003 126239 . + 0 ID=cds-WP_140428482.1;Parent=gene-CCO34_RS25420;Dbxref=GenBank:WP_140428482.1;Name=WP_140428482.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25420;product=hypothetical protein;protein_id=WP_140428482.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 126308 126745 . - . ID=gene-CCO34_RS21525;Name=CCO34_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21525;old_locus_tag=CCO34_21515 NZ_NPMD01000011.1 Protein Homology CDS 126308 126745 . - 0 ID=cds-WP_140428483.1;Parent=gene-CCO34_RS21525;Dbxref=GenBank:WP_140428483.1;Name=WP_140428483.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016618.6;locus_tag=CCO34_RS21525;product=hypothetical protein;protein_id=WP_140428483.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 127415 128431 . + . ID=gene-CCO34_RS21530;Name=CCO34_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21530;old_locus_tag=CCO34_21520 NZ_NPMD01000011.1 Protein Homology CDS 127415 128431 . + 0 ID=cds-WP_094965615.1;Parent=gene-CCO34_RS21530;Dbxref=GenBank:WP_094965615.1;Name=WP_094965615.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: protein motif:HMM:NF015461.6;locus_tag=CCO34_RS21530;product=ADP-ribosyltransferase;protein_id=WP_094965615.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 128846 129298 . + . ID=gene-CCO34_RS21535;Name=CCO34_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21535;old_locus_tag=CCO34_21525 NZ_NPMD01000011.1 Protein Homology CDS 128846 129298 . + 0 ID=cds-WP_336603336.1;Parent=gene-CCO34_RS21535;Dbxref=GenBank:WP_336603336.1;Name=WP_336603336.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045398.3;locus_tag=CCO34_RS21535;product=putative adhesin;protein_id=WP_336603336.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 129323 130468 . + . ID=gene-CCO34_RS21540;Name=CCO34_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21540;old_locus_tag=CCO34_21530 NZ_NPMD01000011.1 Protein Homology CDS 129323 130468 . + 0 ID=cds-WP_237585418.1;Parent=gene-CCO34_RS21540;Dbxref=GenBank:WP_237585418.1;Name=WP_237585418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308051.1;locus_tag=CCO34_RS21540;product=hypothetical protein;protein_id=WP_237585418.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 130478 130957 . + . ID=gene-CCO34_RS21545;Name=CCO34_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21545;old_locus_tag=CCO34_21535 NZ_NPMD01000011.1 Protein Homology CDS 130478 130957 . + 0 ID=cds-WP_080171839.1;Parent=gene-CCO34_RS21545;Dbxref=GenBank:WP_080171839.1;Name=WP_080171839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000980427.1;locus_tag=CCO34_RS21545;product=type III secretion system chaperone;protein_id=WP_080171839.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 130945 131358 . + . ID=gene-CCO34_RS21550;Name=CCO34_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21550;old_locus_tag=CCO34_21540 NZ_NPMD01000011.1 Protein Homology CDS 130945 131358 . + 0 ID=cds-WP_094965619.1;Parent=gene-CCO34_RS21550;Dbxref=GenBank:WP_094965619.1;Name=WP_094965619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449599.1;locus_tag=CCO34_RS21550;product=type III secretion system chaperone;protein_id=WP_094965619.1;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 131716 132228 . - . ID=gene-CCO34_RS25425;Name=CCO34_RS25425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25425 NZ_NPMD01000011.1 GeneMarkS-2+ CDS 131716 132228 . - 0 ID=cds-WP_140428484.1;Parent=gene-CCO34_RS25425;Dbxref=GenBank:WP_140428484.1;Name=WP_140428484.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25425;product=hypothetical protein;protein_id=WP_140428484.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 132532 134067 . - . ID=gene-CCO34_RS21565;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=CCO34_RS21565;old_locus_tag=CCO34_21555;pseudo=true NZ_NPMD01000011.1 Protein Homology CDS 132532 134067 . - 0 ID=cds-CCO34_RS21565;Parent=gene-CCO34_RS21565;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=CCO34_RS21565;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_NPMD01000011.1 RefSeq gene 134087 134380 . - . ID=gene-CCO34_RS21570;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=CCO34_RS21570;old_locus_tag=CCO34_21560 NZ_NPMD01000011.1 Protein Homology CDS 134087 134380 . - 0 ID=cds-WP_094965622.1;Parent=gene-CCO34_RS21570;Dbxref=GenBank:WP_094965622.1;Name=WP_094965622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835132.1;locus_tag=CCO34_RS21570;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_094965622.1;transl_table=11 NZ_NPMD01000011.1 RefSeq pseudogene 134428 135072 . - . ID=gene-CCO34_RS21575;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=CCO34_RS21575;old_locus_tag=CCO34_21565;partial=true;pseudo=true;start_range=.,134428 NZ_NPMD01000011.1 Protein Homology CDS 134428 135072 . - 0 ID=cds-CCO34_RS21575;Parent=gene-CCO34_RS21575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001690050.1;locus_tag=CCO34_RS21575;partial=true;product=IS66-like element accessory protein TnpA;pseudo=true;start_range=.,134428;transl_table=11 ##sequence-region NZ_NPMD01000012.1 1 123994 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000012.1 RefSeq region 1 123994 . + . ID=NZ_NPMD01000012.1:1..123994;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000012.1 RefSeq gene 92 222 . + . ID=gene-CCO34_RS21580;Name=CCO34_RS21580;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS21580;old_locus_tag=CCO34_21570 NZ_NPMD01000012.1 cmsearch ncRNA 92 222 . + . ID=rna-CCO34_RS21580;Parent=gene-CCO34_RS21580;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS21580;product=RtT sRNA NZ_NPMD01000012.1 cmsearch exon 92 222 . + . ID=exon-CCO34_RS21580-1;Parent=rna-CCO34_RS21580;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS21580;product=RtT sRNA NZ_NPMD01000012.1 RefSeq gene 325 1854 . - . ID=gene-CCO34_RS21585;Name=CCO34_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21585;old_locus_tag=CCO34_21575 NZ_NPMD01000012.1 Protein Homology CDS 325 1854 . - 0 ID=cds-WP_001212569.1;Parent=gene-CCO34_RS21585;Dbxref=GenBank:WP_001212569.1;Name=WP_001212569.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=CCO34_RS21585;product=tetratricopeptide repeat protein;protein_id=WP_001212569.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 2095 2772 . - . ID=gene-CCO34_RS21595;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO34_RS21595;old_locus_tag=CCO34_21585 NZ_NPMD01000012.1 Protein Homology CDS 2095 2772 . - 0 ID=cds-WP_000545597.1;Parent=gene-CCO34_RS21595;Dbxref=GenBank:WP_000545597.1;Name=WP_000545597.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=CCO34_RS21595;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545597.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 2772 3482 . - . ID=gene-CCO34_RS21600;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=CCO34_RS21600;old_locus_tag=CCO34_21590 NZ_NPMD01000012.1 Protein Homology CDS 2772 3482 . - 0 ID=cds-WP_000571668.1;Parent=gene-CCO34_RS21600;Dbxref=GenBank:WP_000571668.1;Name=WP_000571668.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=CCO34_RS21600;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571668.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 3479 5014 . - . ID=gene-CCO34_RS21605;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO34_RS21605;old_locus_tag=CCO34_21595 NZ_NPMD01000012.1 Protein Homology CDS 3479 5014 . - 0 ID=cds-WP_000702629.1;Parent=gene-CCO34_RS21605;Dbxref=GenBank:WP_000702629.1;Name=WP_000702629.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=CCO34_RS21605;product=nitrate reductase subunit beta;protein_id=WP_000702629.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 5011 8754 . - . ID=gene-CCO34_RS21610;Name=CCO34_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21610;old_locus_tag=CCO34_21600 NZ_NPMD01000012.1 Protein Homology CDS 5011 8754 . - 0 ID=cds-WP_000032893.1;Parent=gene-CCO34_RS21610;Dbxref=GenBank:WP_000032893.1;Name=WP_000032893.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=CCO34_RS21610;product=nitrate reductase subunit alpha;protein_id=WP_000032893.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 9142 10539 . - . ID=gene-CCO34_RS21615;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=CCO34_RS21615;old_locus_tag=CCO34_21605 NZ_NPMD01000012.1 Protein Homology CDS 9142 10539 . - 0 ID=cds-WP_000019848.1;Parent=gene-CCO34_RS21615;Dbxref=GenBank:WP_000019848.1;Name=WP_000019848.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=CCO34_RS21615;product=nitrate transporter NarK;protein_id=WP_000019848.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 10880 12676 . + . ID=gene-CCO34_RS21625;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=CCO34_RS21625;old_locus_tag=CCO34_21615 NZ_NPMD01000012.1 Protein Homology CDS 10880 12676 . + 0 ID=cds-WP_000476251.1;Parent=gene-CCO34_RS21625;Dbxref=GenBank:WP_000476251.1;Name=WP_000476251.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=CCO34_RS21625;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000476251.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 12669 13319 . + . ID=gene-CCO34_RS21630;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=CCO34_RS21630;old_locus_tag=CCO34_21620 NZ_NPMD01000012.1 Protein Homology CDS 12669 13319 . + 0 ID=cds-WP_001064598.1;Parent=gene-CCO34_RS21630;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=CCO34_RS21630;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 13320 14744 . - . ID=gene-CCO34_RS21635;Name=CCO34_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21635;old_locus_tag=CCO34_21625 NZ_NPMD01000012.1 Protein Homology CDS 13320 14744 . - 0 ID=cds-WP_001116350.1;Parent=gene-CCO34_RS21635;Dbxref=GenBank:WP_001116350.1;Name=WP_001116350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=CCO34_RS21635;product=YchO/YchP family invasin;protein_id=WP_001116350.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 14921 15274 . + . ID=gene-CCO34_RS21640;Name=CCO34_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21640;old_locus_tag=CCO34_21630 NZ_NPMD01000012.1 Protein Homology CDS 14921 15274 . + 0 ID=cds-WP_001179794.1;Parent=gene-CCO34_RS21640;Dbxref=GenBank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=CCO34_RS21640;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179794.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 15354 15584 . - . ID=gene-CCO34_RS21645;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=CCO34_RS21645;old_locus_tag=CCO34_21635 NZ_NPMD01000012.1 Protein Homology CDS 15354 15584 . - 0 ID=cds-WP_001519701.1;Parent=gene-CCO34_RS21645;Dbxref=GenBank:WP_001519701.1;Name=WP_001519701.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=CCO34_RS21645;product=putative cation transport regulator ChaB;protein_id=WP_001519701.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 15851 16951 . + . ID=gene-CCO34_RS21650;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=CCO34_RS21650;old_locus_tag=CCO34_21640 NZ_NPMD01000012.1 Protein Homology CDS 15851 16951 . + 0 ID=cds-WP_000148418.1;Parent=gene-CCO34_RS21650;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=CCO34_RS21650;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 17005 17859 . - . ID=gene-CCO34_RS21655;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=CCO34_RS21655;old_locus_tag=CCO34_21645 NZ_NPMD01000012.1 Protein Homology CDS 17005 17859 . - 0 ID=cds-WP_000811046.1;Parent=gene-CCO34_RS21655;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=CCO34_RS21655;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 17897 18706 . - . ID=gene-CCO34_RS21660;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=CCO34_RS21660;old_locus_tag=CCO34_21650 NZ_NPMD01000012.1 Protein Homology CDS 17897 18706 . - 0 ID=cds-WP_001257065.1;Parent=gene-CCO34_RS21660;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=CCO34_RS21660;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 18710 19099 . - . ID=gene-CCO34_RS21665;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=CCO34_RS21665;old_locus_tag=CCO34_21655 NZ_NPMD01000012.1 Protein Homology CDS 18710 19099 . - 0 ID=cds-WP_080181044.1;Parent=gene-CCO34_RS21665;Dbxref=GenBank:WP_080181044.1;Name=WP_080181044.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=CCO34_RS21665;product=invasion regulator SirB2;protein_id=WP_080181044.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 19096 19929 . - . ID=gene-CCO34_RS21670;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CCO34_RS21670;old_locus_tag=CCO34_21660 NZ_NPMD01000012.1 Protein Homology CDS 19096 19929 . - 0 ID=cds-WP_000347308.1;Parent=gene-CCO34_RS21670;Dbxref=GenBank:WP_000347308.1;Name=WP_000347308.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=CCO34_RS21670;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000347308.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 19929 21011 . - . ID=gene-CCO34_RS21675;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CCO34_RS21675;old_locus_tag=CCO34_21665 NZ_NPMD01000012.1 Protein Homology CDS 19929 21011 . - 0 ID=cds-WP_000804703.1;Parent=gene-CCO34_RS21675;Dbxref=GenBank:WP_000804703.1;Name=WP_000804703.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=CCO34_RS21675;product=peptide chain release factor 1;protein_id=WP_000804703.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 21052 22308 . - . ID=gene-CCO34_RS21680;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CCO34_RS21680;old_locus_tag=CCO34_21670 NZ_NPMD01000012.1 Protein Homology CDS 21052 22308 . - 0 ID=cds-WP_000173208.1;Parent=gene-CCO34_RS21680;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=CCO34_RS21680;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 22622 23245 . + . ID=gene-CCO34_RS21685;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=CCO34_RS21685;old_locus_tag=CCO34_21675 NZ_NPMD01000012.1 Protein Homology CDS 22622 23245 . + 0 ID=cds-WP_000174484.1;Parent=gene-CCO34_RS21685;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=CCO34_RS21685;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 23242 24093 . + . ID=gene-CCO34_RS21690;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CCO34_RS21690;old_locus_tag=CCO34_21680 NZ_NPMD01000012.1 Protein Homology CDS 23242 24093 . + 0 ID=cds-WP_000988253.1;Parent=gene-CCO34_RS21690;Dbxref=GenBank:WP_000988253.1;Name=WP_000988253.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=CCO34_RS21690;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988253.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 24359 25306 . + . ID=gene-CCO34_RS21695;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=CCO34_RS21695;old_locus_tag=CCO34_21685 NZ_NPMD01000012.1 Protein Homology CDS 24359 25306 . + 0 ID=cds-WP_001518537.1;Parent=gene-CCO34_RS21695;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=CCO34_RS21695;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 25431 27116 . + . ID=gene-CCO34_RS21700;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=CCO34_RS21700;old_locus_tag=CCO34_21690 NZ_NPMD01000012.1 Protein Homology CDS 25431 27116 . + 0 ID=cds-WP_001037188.1;Parent=gene-CCO34_RS21700;Dbxref=GenBank:WP_001037188.1;Name=WP_001037188.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=CCO34_RS21700;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037188.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 27161 27439 . - . ID=gene-CCO34_RS21705;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=CCO34_RS21705;old_locus_tag=CCO34_21695 NZ_NPMD01000012.1 Protein Homology CDS 27161 27439 . - 0 ID=cds-WP_000823878.1;Parent=gene-CCO34_RS21705;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=CCO34_RS21705;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 27715 28299 . + . ID=gene-CCO34_RS21710;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CCO34_RS21710;old_locus_tag=CCO34_21700 NZ_NPMD01000012.1 Protein Homology CDS 27715 28299 . + 0 ID=cds-WP_000985595.1;Parent=gene-CCO34_RS21710;Dbxref=GenBank:WP_000985595.1;Name=WP_000985595.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=CCO34_RS21710;product=aminoacyl-tRNA hydrolase;protein_id=WP_000985595.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 28416 29507 . + . ID=gene-CCO34_RS21715;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CCO34_RS21715;old_locus_tag=CCO34_21705 NZ_NPMD01000012.1 Protein Homology CDS 28416 29507 . + 0 ID=cds-WP_000505850.1;Parent=gene-CCO34_RS21715;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=CCO34_RS21715;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 29666 30931 . - . ID=gene-CCO34_RS21720;Name=CCO34_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21720;old_locus_tag=CCO34_21710 NZ_NPMD01000012.1 Protein Homology CDS 29666 30931 . - 0 ID=cds-WP_094965633.1;Parent=gene-CCO34_RS21720;Dbxref=GenBank:WP_094965633.1;Name=WP_094965633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=CCO34_RS21720;product=DUF4427 domain-containing protein;protein_id=WP_094965633.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 31426 32544 . + . ID=gene-CCO34_RS21725;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=CCO34_RS21725;old_locus_tag=CCO34_21715 NZ_NPMD01000012.1 Protein Homology CDS 31426 32544 . + 0 ID=cds-WP_001058308.1;Parent=gene-CCO34_RS21725;Dbxref=GenBank:WP_001058308.1;Name=WP_001058308.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=CCO34_RS21725;product=hydrogenase 1 small subunit;protein_id=WP_001058308.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 32541 34334 . + . ID=gene-CCO34_RS21730;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=CCO34_RS21730;old_locus_tag=CCO34_21720 NZ_NPMD01000012.1 Protein Homology CDS 32541 34334 . + 0 ID=cds-WP_000070982.1;Parent=gene-CCO34_RS21730;Dbxref=GenBank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=CCO34_RS21730;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 34353 35084 . + . ID=gene-CCO34_RS21735;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=CCO34_RS21735;old_locus_tag=CCO34_21725 NZ_NPMD01000012.1 Protein Homology CDS 34353 35084 . + 0 ID=cds-WP_000147031.1;Parent=gene-CCO34_RS21735;Dbxref=GenBank:WP_000147031.1;Name=WP_000147031.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=CCO34_RS21735;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147031.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 35081 35677 . + . ID=gene-CCO34_RS21740;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=CCO34_RS21740;old_locus_tag=CCO34_21730 NZ_NPMD01000012.1 Protein Homology CDS 35081 35677 . + 0 ID=cds-WP_000993810.1;Parent=gene-CCO34_RS21740;Dbxref=GenBank:WP_000993810.1;Name=WP_000993810.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=CCO34_RS21740;product=hydrogenase 1 maturation protease;protein_id=WP_000993810.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 35667 36071 . + . ID=gene-CCO34_RS21745;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=CCO34_RS21745;old_locus_tag=CCO34_21735 NZ_NPMD01000012.1 Protein Homology CDS 35667 36071 . + 0 ID=cds-WP_001262580.1;Parent=gene-CCO34_RS21745;Dbxref=GenBank:WP_001262580.1;Name=WP_001262580.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=CCO34_RS21745;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262580.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 36068 36916 . + . ID=gene-CCO34_RS21750;Name=CCO34_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21750;old_locus_tag=CCO34_21740 NZ_NPMD01000012.1 Protein Homology CDS 36068 36916 . + 0 ID=cds-WP_000063377.1;Parent=gene-CCO34_RS21750;Dbxref=GenBank:WP_000063377.1;Name=WP_000063377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=CCO34_RS21750;product=hydrogenase expression/formation protein;protein_id=WP_000063377.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 36991 38535 . + . ID=gene-CCO34_RS21755;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=CCO34_RS21755;old_locus_tag=CCO34_21745 NZ_NPMD01000012.1 Protein Homology CDS 36991 38535 . + 0 ID=cds-WP_000263613.1;Parent=gene-CCO34_RS21755;Dbxref=GenBank:WP_000263613.1;Name=WP_000263613.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=CCO34_RS21755;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263613.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 38547 39683 . + . ID=gene-CCO34_RS21760;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=CCO34_RS21760;old_locus_tag=CCO34_21750 NZ_NPMD01000012.1 Protein Homology CDS 38547 39683 . + 0 ID=cds-WP_000888117.1;Parent=gene-CCO34_RS21760;Dbxref=GenBank:WP_000888117.1;Name=WP_000888117.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=CCO34_RS21760;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888117.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 39696 39785 . + . ID=gene-CCO34_RS21765;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=CCO34_RS21765;old_locus_tag=CCO34_21755 NZ_NPMD01000012.1 Protein Homology CDS 39696 39785 . + 0 ID=cds-WP_000270301.1;Parent=gene-CCO34_RS21765;Dbxref=GenBank:WP_000270301.1;Name=WP_000270301.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=CCO34_RS21765;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270301.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 40180 41454 . + . ID=gene-CCO34_RS21770;Name=CCO34_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21770;old_locus_tag=CCO34_21760 NZ_NPMD01000012.1 Protein Homology CDS 40180 41454 . + 0 ID=cds-WP_001526439.1;Parent=gene-CCO34_RS21770;Dbxref=GenBank:WP_001526439.1;Name=WP_001526439.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=CCO34_RS21770;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001526439.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 41668 43380 . + . ID=gene-CCO34_RS21775;Name=CCO34_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21775;old_locus_tag=CCO34_21765 NZ_NPMD01000012.1 Protein Homology CDS 41668 43380 . + 0 ID=cds-WP_000612831.1;Parent=gene-CCO34_RS21775;Dbxref=GenBank:WP_000612831.1;Name=WP_000612831.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=CCO34_RS21775;product=alpha%2Calpha-trehalase;protein_id=WP_000612831.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 43443 43697 . - . ID=gene-CCO34_RS21780;Name=CCO34_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21780;old_locus_tag=CCO34_21770 NZ_NPMD01000012.1 Protein Homology CDS 43443 43697 . - 0 ID=cds-WP_000511323.1;Parent=gene-CCO34_RS21780;Dbxref=GenBank:WP_000511323.1;Name=WP_000511323.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=CCO34_RS21780;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511323.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 43866 44600 . + . ID=gene-CCO34_RS21785;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=CCO34_RS21785;old_locus_tag=CCO34_21775 NZ_NPMD01000012.1 Protein Homology CDS 43866 44600 . + 0 ID=cds-WP_000017426.1;Parent=gene-CCO34_RS21785;Dbxref=GenBank:WP_000017426.1;Name=WP_000017426.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=CCO34_RS21785;product=flagellar brake protein YcgR;protein_id=WP_000017426.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 44614 45225 . - . ID=gene-CCO34_RS21790;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=CCO34_RS21790;old_locus_tag=CCO34_21780 NZ_NPMD01000012.1 Protein Homology CDS 44614 45225 . - 0 ID=cds-WP_000776974.1;Parent=gene-CCO34_RS21790;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=CCO34_RS21790;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 45396 46310 . + . ID=gene-CCO34_RS21795;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=CCO34_RS21795;old_locus_tag=CCO34_21785 NZ_NPMD01000012.1 Protein Homology CDS 45396 46310 . + 0 ID=cds-WP_000051613.1;Parent=gene-CCO34_RS21795;Dbxref=GenBank:WP_000051613.1;Name=WP_000051613.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=CCO34_RS21795;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051613.1;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 46407 48122 . + . ID=gene-CCO34_RS21800;Name=CCO34_RS21800;end_range=48122,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS21800;old_locus_tag=CCO34_21790;partial=true;pseudo=true NZ_NPMD01000012.1 Protein Homology CDS 46407 48122 . + 0 ID=cds-CCO34_RS21800;Parent=gene-CCO34_RS21800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;end_range=48122,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=CCO34_RS21800;partial=true;product=potassium/proton antiporter;pseudo=true;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 48078 48200 . - . ID=gene-CCO34_RS26265;Name=CCO34_RS26265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26265;partial=true;pseudo=true;start_range=.,48078 NZ_NPMD01000012.1 Protein Homology CDS 48078 48200 . - 0 ID=cds-CCO34_RS26265;Parent=gene-CCO34_RS26265;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=CCO34_RS26265;partial=true;product=hypothetical protein;pseudo=true;start_range=.,48078;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 48202 49272 . - . ID=gene-CCO34_RS21805;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=CCO34_RS21805;old_locus_tag=CCO34_21795 NZ_NPMD01000012.1 Protein Homology CDS 48202 49272 . - 0 ID=cds-WP_000197903.1;Parent=gene-CCO34_RS21805;Dbxref=GenBank:WP_000197903.1;Name=WP_000197903.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=CCO34_RS21805;product=catabolic alanine racemase DadX;protein_id=WP_000197903.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 49286 50584 . - . ID=gene-CCO34_RS21810;Name=CCO34_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21810;old_locus_tag=CCO34_21800 NZ_NPMD01000012.1 Protein Homology CDS 49286 50584 . - 0 ID=cds-WP_001266938.1;Parent=gene-CCO34_RS21810;Dbxref=GenBank:WP_001266938.1;Name=WP_001266938.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=CCO34_RS21810;product=D-amino acid dehydrogenase;protein_id=WP_001266938.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 50907 52439 . + . ID=gene-CCO34_RS21815;Name=CCO34_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21815;old_locus_tag=CCO34_21805 NZ_NPMD01000012.1 Protein Homology CDS 50907 52439 . + 0 ID=cds-WP_000190831.1;Parent=gene-CCO34_RS21815;Dbxref=GenBank:WP_000190831.1;Name=WP_000190831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=CCO34_RS21815;product=SpoVR family protein;protein_id=WP_000190831.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 52486 53205 . - . ID=gene-CCO34_RS21820;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=CCO34_RS21820;old_locus_tag=CCO34_21810 NZ_NPMD01000012.1 Protein Homology CDS 52486 53205 . - 0 ID=cds-WP_000234826.1;Parent=gene-CCO34_RS21820;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=CCO34_RS21820;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 53425 54969 . + . ID=gene-CCO34_RS21825;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=CCO34_RS21825;old_locus_tag=CCO34_21815 NZ_NPMD01000012.1 Protein Homology CDS 53425 54969 . + 0 ID=cds-WP_000406438.1;Parent=gene-CCO34_RS21825;Dbxref=GenBank:WP_000406438.1;Name=WP_000406438.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=CCO34_RS21825;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406438.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 55111 55641 . + . ID=gene-CCO34_RS21830;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=CCO34_RS21830;old_locus_tag=CCO34_21820 NZ_NPMD01000012.1 Protein Homology CDS 55111 55641 . + 0 ID=cds-WP_000943475.1;Parent=gene-CCO34_RS21830;Dbxref=GenBank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=CCO34_RS21830;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 55750 56091 . + . ID=gene-CCO34_RS21835;Name=CCO34_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21835;old_locus_tag=CCO34_21825 NZ_NPMD01000012.1 Protein Homology CDS 55750 56091 . + 0 ID=cds-WP_000018967.1;Parent=gene-CCO34_RS21835;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=CCO34_RS21835;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 56162 56335 . - . ID=gene-CCO34_RS21840;Name=CCO34_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21840;old_locus_tag=CCO34_21830 NZ_NPMD01000012.1 Protein Homology CDS 56162 56335 . - 0 ID=cds-WP_001083582.1;Parent=gene-CCO34_RS21840;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=CCO34_RS21840;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 56527 56664 . - . ID=gene-CCO34_RS21845;Name=CCO34_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21845;old_locus_tag=CCO34_21835 NZ_NPMD01000012.1 Protein Homology CDS 56527 56664 . - 0 ID=cds-WP_001519337.1;Parent=gene-CCO34_RS21845;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=CCO34_RS21845;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 57016 57462 . - . ID=gene-CCO34_RS21850;Name=CCO34_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21850;old_locus_tag=CCO34_21840 NZ_NPMD01000012.1 Protein Homology CDS 57016 57462 . - 0 ID=cds-WP_001285703.1;Parent=gene-CCO34_RS21850;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=CCO34_RS21850;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 57555 58214 . - . ID=gene-CCO34_RS21855;Name=CCO34_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21855;old_locus_tag=CCO34_21845 NZ_NPMD01000012.1 Protein Homology CDS 57555 58214 . - 0 ID=cds-WP_001519895.1;Parent=gene-CCO34_RS21855;Dbxref=GenBank:WP_001519895.1;Name=WP_001519895.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=CCO34_RS21855;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001519895.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 58264 58557 . - . ID=gene-CCO34_RS21860;Name=CCO34_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21860;old_locus_tag=CCO34_21850 NZ_NPMD01000012.1 Protein Homology CDS 58264 58557 . - 0 ID=cds-WP_001537109.1;Parent=gene-CCO34_RS21860;Dbxref=GenBank:WP_001537109.1;Name=WP_001537109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=CCO34_RS21860;product=YcgL domain-containing protein;protein_id=WP_001537109.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 58683 59390 . + . ID=gene-CCO34_RS21865;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=CCO34_RS21865;old_locus_tag=CCO34_21855 NZ_NPMD01000012.1 Protein Homology CDS 58683 59390 . + 0 ID=cds-WP_000072527.1;Parent=gene-CCO34_RS21865;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=CCO34_RS21865;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 59414 60226 . + . ID=gene-CCO34_RS21870;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=CCO34_RS21870;old_locus_tag=CCO34_21860 NZ_NPMD01000012.1 Protein Homology CDS 59414 60226 . + 0 ID=cds-WP_000101047.1;Parent=gene-CCO34_RS21870;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=CCO34_RS21870;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 60230 60496 . + . ID=gene-CCO34_RS21875;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=CCO34_RS21875;old_locus_tag=CCO34_21865 NZ_NPMD01000012.1 Protein Homology CDS 60230 60496 . + 0 ID=cds-WP_001185666.1;Parent=gene-CCO34_RS21875;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=CCO34_RS21875;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 60618 61745 . - . ID=gene-CCO34_RS21880;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=CCO34_RS21880;old_locus_tag=CCO34_21870 NZ_NPMD01000012.1 Protein Homology CDS 60618 61745 . - 0 ID=cds-WP_001109124.1;Parent=gene-CCO34_RS21880;Dbxref=GenBank:WP_001109124.1;Name=WP_001109124.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=CCO34_RS21880;product=ribonuclease D;protein_id=WP_001109124.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 61818 63503 . - . ID=gene-CCO34_RS21885;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CCO34_RS21885;old_locus_tag=CCO34_21875 NZ_NPMD01000012.1 Protein Homology CDS 61818 63503 . - 0 ID=cds-WP_000758418.1;Parent=gene-CCO34_RS21885;Dbxref=GenBank:WP_000758418.1;Name=WP_000758418.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=CCO34_RS21885;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758418.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 63708 64289 . - . ID=gene-CCO34_RS21895;Name=CCO34_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21895;old_locus_tag=CCO34_21885 NZ_NPMD01000012.1 Protein Homology CDS 63708 64289 . - 0 ID=cds-WP_000290594.1;Parent=gene-CCO34_RS21895;Dbxref=GenBank:WP_000290594.1;Name=WP_000290594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=CCO34_RS21895;product=Slp family lipoprotein;protein_id=WP_000290594.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 64361 65056 . - . ID=gene-CCO34_RS21900;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CCO34_RS21900;old_locus_tag=CCO34_21890 NZ_NPMD01000012.1 Protein Homology CDS 64361 65056 . - 0 ID=cds-WP_001221014.1;Parent=gene-CCO34_RS21900;Dbxref=GenBank:WP_001221014.1;Name=WP_001221014.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=CCO34_RS21900;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221014.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 65114 67024 . - . ID=gene-CCO34_RS21905;Name=CCO34_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21905;old_locus_tag=CCO34_21895 NZ_NPMD01000012.1 Protein Homology CDS 65114 67024 . - 0 ID=cds-WP_000128807.1;Parent=gene-CCO34_RS21905;Dbxref=GenBank:WP_000128807.1;Name=WP_000128807.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=CCO34_RS21905;product=ATP-dependent DNA helicase;protein_id=WP_000128807.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 67155 67499 . + . ID=gene-CCO34_RS21910;Name=CCO34_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21910;old_locus_tag=CCO34_21900 NZ_NPMD01000012.1 Protein Homology CDS 67155 67499 . + 0 ID=cds-WP_000029548.1;Parent=gene-CCO34_RS21910;Dbxref=GenBank:WP_000029548.1;Name=WP_000029548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=CCO34_RS21910;product=RidA family protein;protein_id=WP_000029548.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 67505 67684 . - . ID=gene-CCO34_RS21915;Name=CCO34_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21915;old_locus_tag=CCO34_21905 NZ_NPMD01000012.1 Protein Homology CDS 67505 67684 . - 0 ID=cds-WP_000457328.1;Parent=gene-CCO34_RS21915;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=CCO34_RS21915;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 67765 69129 . + . ID=gene-CCO34_RS21920;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=CCO34_RS21920;old_locus_tag=CCO34_21910 NZ_NPMD01000012.1 Protein Homology CDS 67765 69129 . + 0 ID=cds-WP_000978454.1;Parent=gene-CCO34_RS21920;Dbxref=GenBank:WP_000978454.1;Name=WP_000978454.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=CCO34_RS21920;product=aminodeoxychorismate synthase component 1;protein_id=WP_000978454.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 69133 69711 . + . ID=gene-CCO34_RS21925;Name=CCO34_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21925;old_locus_tag=CCO34_21915 NZ_NPMD01000012.1 Protein Homology CDS 69133 69711 . + 0 ID=cds-WP_000381544.1;Parent=gene-CCO34_RS21925;Dbxref=GenBank:WP_000381544.1;Name=WP_000381544.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=CCO34_RS21925;product=CoA pyrophosphatase;protein_id=WP_000381544.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 69975 71339 . + . ID=gene-CCO34_RS21930;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=CCO34_RS21930;old_locus_tag=CCO34_21920 NZ_NPMD01000012.1 Protein Homology CDS 69975 71339 . + 0 ID=cds-WP_000624277.1;Parent=gene-CCO34_RS21930;Dbxref=GenBank:WP_000624277.1;Name=WP_000624277.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=CCO34_RS21930;product=L-serine ammonia-lyase;protein_id=WP_000624277.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 71477 73078 . + . ID=gene-CCO34_RS21935;Name=CCO34_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21935;old_locus_tag=CCO34_21925 NZ_NPMD01000012.1 Protein Homology CDS 71477 73078 . + 0 ID=cds-WP_001192519.1;Parent=gene-CCO34_RS21935;Dbxref=GenBank:WP_001192519.1;Name=WP_001192519.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=CCO34_RS21935;product=EAL domain-containing protein;protein_id=WP_001192519.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 73100 74659 . - . ID=gene-CCO34_RS21940;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=CCO34_RS21940;old_locus_tag=CCO34_21930 NZ_NPMD01000012.1 Protein Homology CDS 73100 74659 . - 0 ID=cds-WP_000421820.1;Parent=gene-CCO34_RS21940;Dbxref=GenBank:WP_000421820.1;Name=WP_000421820.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=CCO34_RS21940;product=CNNM family cation transport protein YoaE;protein_id=WP_000421820.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 74647 74979 . - . ID=gene-CCO34_RS26270;Name=CCO34_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26270;old_locus_tag=CCO34_21935 NZ_NPMD01000012.1 Protein Homology CDS 74647 74979 . - 0 ID=cds-WP_392451743.1;Parent=gene-CCO34_RS26270;Dbxref=GenBank:WP_392451743.1;Name=WP_392451743.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=CCO34_RS26270;product=protein YoaL;protein_id=WP_392451743.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 75132 76100 . + . ID=gene-CCO34_RS21950;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=CCO34_RS21950;old_locus_tag=CCO34_21940 NZ_NPMD01000012.1 Protein Homology CDS 75132 76100 . + 0 ID=cds-WP_000150521.1;Parent=gene-CCO34_RS21950;Dbxref=GenBank:WP_000150521.1;Name=WP_000150521.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=CCO34_RS21950;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150521.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 76153 76953 . + . ID=gene-CCO34_RS21955;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=CCO34_RS21955;old_locus_tag=CCO34_21945 NZ_NPMD01000012.1 Protein Homology CDS 76153 76953 . + 0 ID=cds-WP_000406920.1;Parent=gene-CCO34_RS21955;Dbxref=GenBank:WP_000406920.1;Name=WP_000406920.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=CCO34_RS21955;product=PTS mannose transporter subunit IIC;protein_id=WP_000406920.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 76966 77817 . + . ID=gene-CCO34_RS21960;Name=CCO34_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21960;old_locus_tag=CCO34_21950 NZ_NPMD01000012.1 Protein Homology CDS 76966 77817 . + 0 ID=cds-WP_001518647.1;Parent=gene-CCO34_RS21960;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=CCO34_RS21960;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 77875 78333 . + . ID=gene-CCO34_RS21965;Name=CCO34_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21965;old_locus_tag=CCO34_21955 NZ_NPMD01000012.1 Protein Homology CDS 77875 78333 . + 0 ID=cds-WP_000156280.1;Parent=gene-CCO34_RS21965;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=CCO34_RS21965;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11 NZ_NPMD01000012.1 cmsearch riboswitch 78530 78631 . + . ID=id-NZ_NPMD01000012.1:78530..78631;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMD01000012.1 RefSeq gene 78743 79309 . + . ID=gene-CCO34_RS21975;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=CCO34_RS21975;old_locus_tag=CCO34_21965 NZ_NPMD01000012.1 Protein Homology CDS 78743 79309 . + 0 ID=cds-WP_001518359.1;Parent=gene-CCO34_RS21975;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=CCO34_RS21975;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 79306 80115 . - . ID=gene-CCO34_RS21980;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=CCO34_RS21980;old_locus_tag=CCO34_21970 NZ_NPMD01000012.1 Protein Homology CDS 79306 80115 . - 0 ID=cds-WP_000010924.1;Parent=gene-CCO34_RS21980;Dbxref=GenBank:WP_000010924.1;Name=WP_000010924.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=CCO34_RS21980;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010924.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 80181 81926 . - . ID=gene-CCO34_RS21985;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO34_RS21985;old_locus_tag=CCO34_21975 NZ_NPMD01000012.1 Protein Homology CDS 80181 81926 . - 0 ID=cds-WP_080180944.1;Parent=gene-CCO34_RS21985;Dbxref=GenBank:WP_080180944.1;Name=WP_080180944.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=CCO34_RS21985;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_080180944.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 82146 82355 . - . ID=gene-CCO34_RS21990;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO34_RS21990;old_locus_tag=CCO34_21980 NZ_NPMD01000012.1 Protein Homology CDS 82146 82355 . - 0 ID=cds-WP_001062678.1;Parent=gene-CCO34_RS21990;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=CCO34_RS21990;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 82368 82511 . - . ID=gene-CCO34_RS21995;Name=CCO34_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS21995;old_locus_tag=CCO34_21985 NZ_NPMD01000012.1 Protein Homology CDS 82368 82511 . - 0 ID=cds-WP_001537930.1;Parent=gene-CCO34_RS21995;Dbxref=GenBank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=CCO34_RS21995;product=DUF2627 domain-containing protein;protein_id=WP_001537930.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 83160 83447 . - . ID=gene-CCO34_RS22000;Name=CCO34_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22000;old_locus_tag=CCO34_21990 NZ_NPMD01000012.1 Protein Homology CDS 83160 83447 . - 0 ID=cds-WP_001000660.1;Parent=gene-CCO34_RS22000;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=CCO34_RS22000;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 83518 83661 . - . ID=gene-CCO34_RS22005;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=CCO34_RS22005;old_locus_tag=CCO34_21995 NZ_NPMD01000012.1 Protein Homology CDS 83518 83661 . - 0 ID=cds-WP_000714547.1;Parent=gene-CCO34_RS22005;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=CCO34_RS22005;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 83819 84058 . + . ID=gene-CCO34_RS22010;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=CCO34_RS22010;old_locus_tag=CCO34_22000 NZ_NPMD01000012.1 Protein Homology CDS 83819 84058 . + 0 ID=cds-WP_001236776.1;Parent=gene-CCO34_RS22010;Dbxref=GenBank:WP_001236776.1;Name=WP_001236776.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=CCO34_RS22010;product=invasion protein YobH;protein_id=WP_001236776.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 84270 85061 . - . ID=gene-CCO34_RS22015;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=CCO34_RS22015;old_locus_tag=CCO34_22005 NZ_NPMD01000012.1 Protein Homology CDS 84270 85061 . - 0 ID=cds-WP_001262195.1;Parent=gene-CCO34_RS22015;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=CCO34_RS22015;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 85237 86610 . + . ID=gene-CCO34_RS22020;Name=CCO34_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22020;old_locus_tag=CCO34_22010 NZ_NPMD01000012.1 Protein Homology CDS 85237 86610 . + 0 ID=cds-WP_000416130.1;Parent=gene-CCO34_RS22020;Dbxref=GenBank:WP_000416130.1;Name=WP_000416130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=CCO34_RS22020;product=MFS transporter;protein_id=WP_000416130.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 86658 87539 . - . ID=gene-CCO34_RS22025;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=CCO34_RS22025;old_locus_tag=CCO34_22015 NZ_NPMD01000012.1 Protein Homology CDS 86658 87539 . - 0 ID=cds-WP_000984498.1;Parent=gene-CCO34_RS22025;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=CCO34_RS22025;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 87733 89781 . - . ID=gene-CCO34_RS22030;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=CCO34_RS22030;old_locus_tag=CCO34_22020 NZ_NPMD01000012.1 Protein Homology CDS 87733 89781 . - 0 ID=cds-WP_001091237.1;Parent=gene-CCO34_RS22030;Dbxref=GenBank:WP_001091237.1;Name=WP_001091237.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=CCO34_RS22030;product=carboxy terminal-processing peptidase;protein_id=WP_001091237.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 89801 90487 . - . ID=gene-CCO34_RS22035;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=CCO34_RS22035;old_locus_tag=CCO34_22025 NZ_NPMD01000012.1 Protein Homology CDS 89801 90487 . - 0 ID=cds-WP_000431401.1;Parent=gene-CCO34_RS22035;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=CCO34_RS22035;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 90585 91082 . - . ID=gene-CCO34_RS22040;Name=CCO34_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22040;old_locus_tag=CCO34_22030 NZ_NPMD01000012.1 Protein Homology CDS 90585 91082 . - 0 ID=cds-WP_001518229.1;Parent=gene-CCO34_RS22040;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=CCO34_RS22040;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 91211 92494 . + . ID=gene-CCO34_RS22045;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=CCO34_RS22045;old_locus_tag=CCO34_22035 NZ_NPMD01000012.1 Protein Homology CDS 91211 92494 . + 0 ID=cds-WP_001207294.1;Parent=gene-CCO34_RS22045;Dbxref=GenBank:WP_001207294.1;Name=WP_001207294.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=CCO34_RS22045;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207294.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 92463 95096 . + . ID=gene-CCO34_RS22050;Name=CCO34_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22050;old_locus_tag=CCO34_22040 NZ_NPMD01000012.1 Protein Homology CDS 92463 95096 . + 0 ID=cds-WP_001535256.1;Parent=gene-CCO34_RS22050;Dbxref=GenBank:WP_001535256.1;Name=WP_001535256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=CCO34_RS22050;product=PqiB family protein;protein_id=WP_001535256.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 95174 96613 . + . ID=gene-CCO34_RS22055;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=CCO34_RS22055;old_locus_tag=CCO34_22045 NZ_NPMD01000012.1 Protein Homology CDS 95174 96613 . + 0 ID=cds-WP_001535247.1;Parent=gene-CCO34_RS22055;Dbxref=GenBank:WP_001535247.1;Name=WP_001535247.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=CCO34_RS22055;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_001535247.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 96731 96967 . + . ID=gene-CCO34_RS22060;Name=CCO34_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22060;old_locus_tag=CCO34_22050 NZ_NPMD01000012.1 Protein Homology CDS 96731 96967 . + 0 ID=cds-WP_024131167.1;Parent=gene-CCO34_RS22060;Dbxref=GenBank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=CCO34_RS22060;product=YebV family protein;protein_id=WP_024131167.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 97078 97269 . + . ID=gene-CCO34_RS22065;Name=CCO34_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22065;old_locus_tag=CCO34_22055 NZ_NPMD01000012.1 Protein Homology CDS 97078 97269 . + 0 ID=cds-WP_000457838.1;Parent=gene-CCO34_RS22065;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=CCO34_RS22065;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 97288 97938 . - . ID=gene-CCO34_RS22070;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=CCO34_RS22070;old_locus_tag=CCO34_22060 NZ_NPMD01000012.1 Protein Homology CDS 97288 97938 . - 0 ID=cds-WP_000986168.1;Parent=gene-CCO34_RS22070;Dbxref=GenBank:WP_000986168.1;Name=WP_000986168.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=CCO34_RS22070;product=protein-serine/threonine phosphatase;protein_id=WP_000986168.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 97955 98170 . - . ID=gene-CCO34_RS26110;Name=CCO34_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26110;old_locus_tag=CCO34_22065 NZ_NPMD01000012.1 Protein Homology CDS 97955 98170 . - 0 ID=cds-WP_001574231.1;Parent=gene-CCO34_RS26110;Dbxref=GenBank:WP_001574231.1;Name=WP_001574231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529227.1;locus_tag=CCO34_RS26110;product=hypothetical protein;protein_id=WP_001574231.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 98161 98325 . - . ID=gene-CCO34_RS22080;Name=CCO34_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22080;old_locus_tag=CCO34_22070 NZ_NPMD01000012.1 Protein Homology CDS 98161 98325 . - 0 ID=cds-WP_001134856.1;Parent=gene-CCO34_RS22080;Dbxref=GenBank:WP_001134856.1;Name=WP_001134856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=CCO34_RS22080;product=membrane protein;protein_id=WP_001134856.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 98610 99332 . - . ID=gene-CCO34_RS22085;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=CCO34_RS22085;old_locus_tag=CCO34_22075 NZ_NPMD01000012.1 Protein Homology CDS 98610 99332 . - 0 ID=cds-WP_000182072.1;Parent=gene-CCO34_RS22085;Dbxref=GenBank:WP_000182072.1;Name=WP_000182072.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=CCO34_RS22085;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_000182072.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 100016 100411 . + . ID=gene-CCO34_RS22090;Name=CCO34_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22090;old_locus_tag=CCO34_22080 NZ_NPMD01000012.1 Protein Homology CDS 100016 100411 . + 0 ID=cds-WP_000422890.1;Parent=gene-CCO34_RS22090;Dbxref=GenBank:WP_000422890.1;Name=WP_000422890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=CCO34_RS22090;product=DUF1398 domain-containing protein;protein_id=WP_000422890.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 100741 101217 . + . ID=gene-CCO34_RS22095;Name=CCO34_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22095;old_locus_tag=CCO34_22085 NZ_NPMD01000012.1 Protein Homology CDS 100741 101217 . + 0 ID=cds-WP_000030942.1;Parent=gene-CCO34_RS22095;Dbxref=GenBank:WP_000030942.1;Name=WP_000030942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=CCO34_RS22095;product=hypothetical protein;protein_id=WP_000030942.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 101480 101653 . - . ID=gene-CCO34_RS22100;Name=CCO34_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22100;old_locus_tag=CCO34_22090 NZ_NPMD01000012.1 Protein Homology CDS 101480 101653 . - 0 ID=cds-WP_079838199.1;Parent=gene-CCO34_RS22100;Dbxref=GenBank:WP_079838199.1;Name=WP_079838199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025062.6;locus_tag=CCO34_RS22100;product=CZB domain-containing protein;protein_id=WP_079838199.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 102852 103097 . + . ID=gene-CCO34_RS22105;Name=CCO34_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22105;old_locus_tag=CCO34_22095 NZ_NPMD01000012.1 Protein Homology CDS 102852 103097 . + 0 ID=cds-WP_001051755.1;Parent=gene-CCO34_RS22105;Dbxref=GenBank:WP_001051755.1;Name=WP_001051755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143844.1;locus_tag=CCO34_RS22105;product=hypothetical protein;protein_id=WP_001051755.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 103281 103484 . + . ID=gene-CCO34_RS22110;Name=CCO34_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22110;old_locus_tag=CCO34_22100 NZ_NPMD01000012.1 Protein Homology CDS 103281 103484 . + 0 ID=cds-WP_000774038.1;Parent=gene-CCO34_RS22110;Dbxref=GenBank:WP_000774038.1;Name=WP_000774038.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774038.1;locus_tag=CCO34_RS22110;product=FimD/PapC N-terminal domain-containing protein;protein_id=WP_000774038.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 104097 105194 . + . ID=gene-CCO34_RS22115;Name=CCO34_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22115;old_locus_tag=CCO34_22105 NZ_NPMD01000012.1 Protein Homology CDS 104097 105194 . + 0 ID=cds-WP_020924196.1;Parent=gene-CCO34_RS22115;Dbxref=GenBank:WP_020924196.1;Name=WP_020924196.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.6;locus_tag=CCO34_RS22115;product=acyltransferase family protein;protein_id=WP_020924196.1;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 105313 106051 . + . ID=gene-CCO34_RS25430;Name=CCO34_RS25430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25430;partial=true;pseudo=true;start_range=.,105313 NZ_NPMD01000012.1 Protein Homology CDS 105313 106051 . + 0 ID=cds-CCO34_RS25430;Parent=gene-CCO34_RS25430;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=CCO34_RS25430;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,105313;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 106941 108032 . + . ID=gene-CCO34_RS22130;Name=CCO34_RS22130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS22130;old_locus_tag=CCO34_22120;pseudo=true NZ_NPMD01000012.1 Protein Homology CDS 106941 108032 . + 0 ID=cds-CCO34_RS22130;Parent=gene-CCO34_RS22130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227815.1;locus_tag=CCO34_RS22130;product=lipopolysaccharide N-acetylglucosaminyltransferase;pseudo=true;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 108267 108686 . - . ID=gene-CCO34_RS22135;Name=CCO34_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22135;old_locus_tag=CCO34_22125 NZ_NPMD01000012.1 Protein Homology CDS 108267 108686 . - 0 ID=cds-WP_001025517.1;Parent=gene-CCO34_RS22135;Dbxref=GenBank:WP_001025517.1;Name=WP_001025517.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=CCO34_RS22135;product=GNAT family N-acetyltransferase;protein_id=WP_001025517.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 109059 109328 . + . ID=gene-CCO34_RS22145;Name=CCO34_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22145;old_locus_tag=CCO34_22135 NZ_NPMD01000012.1 Protein Homology CDS 109059 109328 . + 0 ID=cds-WP_001576019.1;Parent=gene-CCO34_RS22145;Dbxref=GenBank:WP_001576019.1;Name=WP_001576019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=CCO34_RS22145;product=hypothetical protein;protein_id=WP_001576019.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 109494 109634 . + . ID=gene-CCO34_RS22150;Name=CCO34_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22150;old_locus_tag=CCO34_22140 NZ_NPMD01000012.1 Protein Homology CDS 109494 109634 . + 0 ID=cds-WP_001576018.1;Parent=gene-CCO34_RS22150;Dbxref=GenBank:WP_001576018.1;Name=WP_001576018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=CCO34_RS22150;product=hypothetical protein;protein_id=WP_001576018.1;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 109906 110328 . - . ID=gene-CCO34_RS22155;Name=CCO34_RS22155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS22155;old_locus_tag=CCO34_22145;partial=true;pseudo=true;start_range=.,109906 NZ_NPMD01000012.1 Protein Homology CDS 109906 110328 . - 0 ID=cds-CCO34_RS22155;Parent=gene-CCO34_RS22155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO34_RS22155;partial=true;product=transposase;pseudo=true;start_range=.,109906;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 110425 110820 . + . ID=gene-CCO34_RS22160;Name=CCO34_RS22160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS22160;old_locus_tag=CCO34_22150;partial=true;pseudo=true;start_range=.,110425 NZ_NPMD01000012.1 Protein Homology CDS 110425 110820 . + 0 ID=cds-CCO34_RS22160;Parent=gene-CCO34_RS22160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078710.1;locus_tag=CCO34_RS22160;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,110425;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 111236 111412 . - . ID=gene-CCO34_RS25930;Name=CCO34_RS25930;end_range=111412,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25930;partial=true;pseudo=true;start_range=.,111236 NZ_NPMD01000012.1 Protein Homology CDS 111236 111412 . - 0 ID=cds-CCO34_RS25930;Parent=gene-CCO34_RS25930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=111412,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO34_RS25930;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,111236;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 111402 111965 . + . ID=gene-CCO34_RS22170;Name=CCO34_RS22170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS22170;old_locus_tag=CCO34_22160;partial=true;pseudo=true;start_range=.,111402 NZ_NPMD01000012.1 Protein Homology CDS 111402 111965 . + 0 ID=cds-CCO34_RS22170;Parent=gene-CCO34_RS22170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO34_RS22170;partial=true;product=fimbrial protein;pseudo=true;start_range=.,111402;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 112756 113670 . + . ID=gene-CCO34_RS22175;Name=CCO34_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22175;old_locus_tag=CCO34_22165 NZ_NPMD01000012.1 Protein Homology CDS 112756 113670 . + 0 ID=cds-WP_001233445.1;Parent=gene-CCO34_RS22175;Dbxref=GenBank:WP_001233445.1;Name=WP_001233445.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=CCO34_RS22175;product=DMT family transporter;protein_id=WP_001233445.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 113803 113961 . + . ID=gene-CCO34_RS22180;Name=CCO34_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22180;old_locus_tag=CCO34_22170 NZ_NPMD01000012.1 Protein Homology CDS 113803 113961 . + 0 ID=cds-WP_000480735.1;Parent=gene-CCO34_RS22180;Dbxref=GenBank:WP_000480735.1;Name=WP_000480735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=CCO34_RS22180;product=DUF5993 family protein;protein_id=WP_000480735.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 113971 114585 . + . ID=gene-CCO34_RS22185;Name=CCO34_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22185;old_locus_tag=CCO34_22175 NZ_NPMD01000012.1 Protein Homology CDS 113971 114585 . + 0 ID=cds-WP_000848068.1;Parent=gene-CCO34_RS22185;Dbxref=GenBank:WP_000848068.1;Name=WP_000848068.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=CCO34_RS22185;product=disulfide bond formation protein B;protein_id=WP_000848068.1;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 114912 115058 . - . ID=gene-CCO34_RS26275;Name=CCO34_RS26275;end_range=115058,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26275;partial=true;pseudo=true NZ_NPMD01000012.1 Protein Homology CDS 114912 115058 . - 0 ID=cds-CCO34_RS26275;Parent=gene-CCO34_RS26275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=115058,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219268.1;locus_tag=CCO34_RS26275;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 115073 115219 . + . ID=gene-CCO34_RS26280;Name=CCO34_RS26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26280 NZ_NPMD01000012.1 GeneMarkS-2+ CDS 115073 115219 . + 0 ID=cds-WP_000951652.1;Parent=gene-CCO34_RS26280;Dbxref=GenBank:WP_000951652.1;Name=WP_000951652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS26280;product=hypothetical protein;protein_id=WP_000951652.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 115733 115858 . - . ID=gene-CCO34_RS22200;Name=CCO34_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22200;old_locus_tag=CCO34_22190 NZ_NPMD01000012.1 Protein Homology CDS 115733 115858 . - 0 ID=cds-WP_000457876.1;Parent=gene-CCO34_RS22200;Dbxref=GenBank:WP_000457876.1;Name=WP_000457876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=CCO34_RS22200;product=hypothetical protein;protein_id=WP_000457876.1;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 115849 116050 . + . ID=gene-CCO34_RS25940;Name=CCO34_RS25940;end_range=116050,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25940;partial=true;pseudo=true;start_range=.,115849 NZ_NPMD01000012.1 Protein Homology CDS 115849 116050 . + 0 ID=cds-CCO34_RS25940;Parent=gene-CCO34_RS25940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=116050,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=CCO34_RS25940;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,115849;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 116429 116629 . + . ID=gene-CCO34_RS22210;Name=CCO34_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22210;old_locus_tag=CCO34_22200 NZ_NPMD01000012.1 Protein Homology CDS 116429 116629 . + 0 ID=cds-WP_012543349.1;Parent=gene-CCO34_RS22210;Dbxref=GenBank:WP_012543349.1;Name=WP_012543349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=CCO34_RS22210;product=PagK family vesicle-borne virulence factor;protein_id=WP_012543349.1;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 116726 117214 . - . ID=gene-CCO34_RS25945;Name=CCO34_RS25945;end_range=117214,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25945;partial=true;pseudo=true NZ_NPMD01000012.1 Protein Homology CDS 116726 117214 . - 0 ID=cds-CCO34_RS25945;Parent=gene-CCO34_RS25945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0098004;end_range=117214,.;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=CCO34_RS25945;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 117181 117555 . - . ID=gene-CCO34_RS25950;Name=CCO34_RS25950;end_range=117555,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25950;partial=true;pseudo=true;start_range=.,117181 NZ_NPMD01000012.1 Protein Homology CDS 117181 117555 . - 0 ID=cds-CCO34_RS25950;Parent=gene-CCO34_RS25950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=117555,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461523.1;locus_tag=CCO34_RS25950;partial=true;product=macro domain-containing protein;pseudo=true;start_range=.,117181;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 117547 118779 . - . ID=gene-CCO34_RS22215;Name=CCO34_RS22215;end_range=118779,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS22215;old_locus_tag=CCO34_22205;partial=true;pseudo=true;start_range=.,117547 NZ_NPMD01000012.1 Protein Homology CDS 117547 118779 . - 0 ID=cds-CCO34_RS22215;Parent=gene-CCO34_RS22215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=118779,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459903.1;locus_tag=CCO34_RS22215;partial=true;product=phage tail protein;pseudo=true;start_range=.,117547;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 118742 119345 . - . ID=gene-CCO34_RS22220;Name=CCO34_RS22220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS22220;old_locus_tag=CCO34_22210;partial=true;pseudo=true;start_range=.,118742 NZ_NPMD01000012.1 Protein Homology CDS 118742 119345 . - 0 ID=cds-CCO34_RS22220;Parent=gene-CCO34_RS22220;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459887.1;locus_tag=CCO34_RS22220;partial=true;product=phage terminase large subunit family protein;pseudo=true;start_range=.,118742;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 119332 119823 . - . ID=gene-CCO34_RS22225;Name=CCO34_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22225;old_locus_tag=CCO34_22215 NZ_NPMD01000012.1 Protein Homology CDS 119332 119823 . - 0 ID=cds-WP_000348535.1;Parent=gene-CCO34_RS22225;Dbxref=GenBank:WP_000348535.1;Name=WP_000348535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=CCO34_RS22225;product=DUF1441 family protein;protein_id=WP_000348535.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 119878 120069 . + . ID=gene-CCO34_RS22230;Name=CCO34_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22230;old_locus_tag=CCO34_22220 NZ_NPMD01000012.1 Protein Homology CDS 119878 120069 . + 0 ID=cds-WP_001034750.1;Parent=gene-CCO34_RS22230;Dbxref=GenBank:WP_001034750.1;Name=WP_001034750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537366.1;locus_tag=CCO34_RS22230;product=hypothetical protein;protein_id=WP_001034750.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 120134 120301 . + . ID=gene-CCO34_RS22235;Name=CCO34_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22235;old_locus_tag=CCO34_22225 NZ_NPMD01000012.1 Protein Homology CDS 120134 120301 . + 0 ID=cds-WP_000789530.1;Parent=gene-CCO34_RS22235;Dbxref=GenBank:WP_000789530.1;Name=WP_000789530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=CCO34_RS22235;product=lytic enzyme;protein_id=WP_000789530.1;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 120558 121091 . - . ID=gene-CCO34_RS22240;Name=CCO34_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22240;old_locus_tag=CCO34_22230 NZ_NPMD01000012.1 Protein Homology CDS 120558 121091 . - 0 ID=cds-WP_001050883.1;Parent=gene-CCO34_RS22240;Dbxref=GenBank:WP_001050883.1;Name=WP_001050883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=CCO34_RS22240;product=DUF2514 domain-containing protein;protein_id=WP_001050883.1;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 121145 121336 . - . ID=gene-CCO34_RS22245;Name=CCO34_RS22245;end_range=121336,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS22245;old_locus_tag=CCO34_22235;partial=true;pseudo=true NZ_NPMD01000012.1 Protein Homology CDS 121145 121336 . - 0 ID=cds-CCO34_RS22245;Parent=gene-CCO34_RS22245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=121336,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=CCO34_RS22245;partial=true;product=glycoside hydrolase family 19 protein;pseudo=true;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 121325 122051 . + . ID=gene-CCO34_RS22250;Name=CCO34_RS22250;end_range=122051,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS22250;old_locus_tag=CCO34_22240;partial=true;pseudo=true;start_range=.,121325 NZ_NPMD01000012.1 Protein Homology CDS 121325 122051 . + 0 ID=cds-CCO34_RS22250;Parent=gene-CCO34_RS22250;Note=The RecE (also known as exonuclease VIII) pathway is an alternative pathway for the initiation of homologous recombination in Escherichia coli. The RecE pathway is activated in recB%2C recC sbcA (suppressors of recB and recC) mutants. Activation of the RecE pathway results in the production of at least two phage proteins relevant for recombinational repair. RecE is a duplex DNA-specific exonuclease which produces 3' overhangs in duplex DNA by preferentially degrading the 5'-ending strands. Recombinational repair of E.coli chromosomal DNA involves as well other proteins: RecA%2C RecF%2C RecJ%2C RecO%2C RecR%2C and RuvC.%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=122051,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=CCO34_RS22250;partial=true;product=exonuclease VIII;pseudo=true;start_range=.,121325;transl_table=11 NZ_NPMD01000012.1 RefSeq pseudogene 122051 122973 . + . ID=gene-CCO34_RS25705;Name=CCO34_RS25705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25705;partial=true;pseudo=true;start_range=.,122051 NZ_NPMD01000012.1 Protein Homology CDS 122051 122973 . + 0 ID=cds-CCO34_RS25705;Parent=gene-CCO34_RS25705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=CCO34_RS25705;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,122051;transl_table=11 NZ_NPMD01000012.1 RefSeq gene 123394 123966 . - . ID=gene-CCO34_RS22260;Name=CCO34_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22260;old_locus_tag=CCO34_22250 NZ_NPMD01000012.1 Protein Homology CDS 123394 123966 . - 0 ID=cds-WP_094965635.1;Parent=gene-CCO34_RS22260;Dbxref=GenBank:WP_094965635.1;Name=WP_094965635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001678699.1;locus_tag=CCO34_RS22260;product=DUF4376 domain-containing protein;protein_id=WP_094965635.1;transl_table=11 ##sequence-region NZ_NPMD01000013.1 1 89495 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000013.1 RefSeq region 1 89495 . + . ID=NZ_NPMD01000013.1:1..89495;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000013.1 RefSeq gene 4 119 . + . ID=gene-CCO34_RS22265;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO34_RS22265;old_locus_tag=CCO34_22255 NZ_NPMD01000013.1 cmsearch rRNA 4 119 . + . ID=rna-CCO34_RS22265;Parent=gene-CCO34_RS22265;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS22265;product=5S ribosomal RNA NZ_NPMD01000013.1 cmsearch exon 4 119 . + . ID=exon-CCO34_RS22265-1;Parent=rna-CCO34_RS22265;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS22265;product=5S ribosomal RNA NZ_NPMD01000013.1 RefSeq gene 174 250 . + . ID=gene-CCO34_RS22270;Name=CCO34_RS22270;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS22270;old_locus_tag=CCO34_22260 NZ_NPMD01000013.1 tRNAscan-SE tRNA 174 250 . + . ID=rna-CCO34_RS22270;Parent=gene-CCO34_RS22270;anticodon=(pos:208..210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22270;product=tRNA-Asp NZ_NPMD01000013.1 tRNAscan-SE exon 174 250 . + . ID=exon-CCO34_RS22270-1;Parent=rna-CCO34_RS22270;anticodon=(pos:208..210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22270;product=tRNA-Asp NZ_NPMD01000013.1 RefSeq gene 259 334 . + . ID=gene-CCO34_RS22275;Name=CCO34_RS22275;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS22275;old_locus_tag=CCO34_22265 NZ_NPMD01000013.1 tRNAscan-SE tRNA 259 334 . + . ID=rna-CCO34_RS22275;Parent=gene-CCO34_RS22275;anticodon=(pos:292..294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22275;product=tRNA-Trp NZ_NPMD01000013.1 tRNAscan-SE exon 259 334 . + . ID=exon-CCO34_RS22275-1;Parent=rna-CCO34_RS22275;anticodon=(pos:292..294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22275;product=tRNA-Trp NZ_NPMD01000013.1 RefSeq gene 436 1284 . - . ID=gene-CCO34_RS22280;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=CCO34_RS22280;old_locus_tag=CCO34_22270 NZ_NPMD01000013.1 Protein Homology CDS 436 1284 . - 0 ID=cds-WP_001541181.1;Parent=gene-CCO34_RS22280;Dbxref=GenBank:WP_001541181.1;Name=WP_001541181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=CCO34_RS22280;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 1391 1729 . + . ID=gene-CCO34_RS22285;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=CCO34_RS22285;old_locus_tag=CCO34_22275 NZ_NPMD01000013.1 Protein Homology CDS 1391 1729 . + 0 ID=cds-WP_000840996.1;Parent=gene-CCO34_RS22285;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=CCO34_RS22285;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 1754 3274 . - . ID=gene-CCO34_RS22290;Name=CCO34_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22290;old_locus_tag=CCO34_22280 NZ_NPMD01000013.1 Protein Homology CDS 1754 3274 . - 0 ID=cds-WP_000050209.1;Parent=gene-CCO34_RS22290;Dbxref=GenBank:WP_000050209.1;Name=WP_000050209.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=CCO34_RS22290;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000050209.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 3626 3724 . + . ID=gene-CCO34_RS22295;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=CCO34_RS22295;old_locus_tag=CCO34_22285 NZ_NPMD01000013.1 Protein Homology CDS 3626 3724 . + 0 ID=cds-WP_001311244.1;Parent=gene-CCO34_RS22295;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=CCO34_RS22295;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 3811 3861 . + . ID=gene-CCO34_RS25710;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=CCO34_RS25710 NZ_NPMD01000013.1 Protein Homology CDS 3811 3861 . + 0 ID=cds-WP_192930503.1;Parent=gene-CCO34_RS25710;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=CCO34_RS25710;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 3864 5552 . + . ID=gene-CCO34_RS22300;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=CCO34_RS22300;old_locus_tag=CCO34_22290 NZ_NPMD01000013.1 Protein Homology CDS 3864 5552 . + 0 ID=cds-WP_001012568.1;Parent=gene-CCO34_RS22300;Dbxref=GenBank:WP_001012568.1;Name=WP_001012568.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=CCO34_RS22300;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012568.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 5549 5812 . + . ID=gene-CCO34_RS22305;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=CCO34_RS22305;old_locus_tag=CCO34_22295 NZ_NPMD01000013.1 Protein Homology CDS 5549 5812 . + 0 ID=cds-WP_000983260.1;Parent=gene-CCO34_RS22305;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=CCO34_RS22305;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 5830 6759 . + . ID=gene-CCO34_RS22310;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=CCO34_RS22310;old_locus_tag=CCO34_22300 NZ_NPMD01000013.1 Protein Homology CDS 5830 6759 . + 0 ID=cds-WP_000208532.1;Parent=gene-CCO34_RS22310;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=CCO34_RS22310;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 6920 8770 . + . ID=gene-CCO34_RS22315;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CCO34_RS22315;old_locus_tag=CCO34_22305 NZ_NPMD01000013.1 Protein Homology CDS 6920 8770 . + 0 ID=cds-WP_001127429.1;Parent=gene-CCO34_RS22315;Dbxref=GenBank:WP_001127429.1;Name=WP_001127429.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=CCO34_RS22315;product=dihydroxy-acid dehydratase;protein_id=WP_001127429.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 8773 10317 . + . ID=gene-CCO34_RS22320;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CCO34_RS22320;old_locus_tag=CCO34_22310 NZ_NPMD01000013.1 Protein Homology CDS 8773 10317 . + 0 ID=cds-WP_001518457.1;Parent=gene-CCO34_RS22320;Dbxref=GenBank:WP_001518457.1;Name=WP_001518457.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=CCO34_RS22320;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001518457.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 10600 10917 . + . ID=gene-CCO34_RS22325;Name=CCO34_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22325;old_locus_tag=CCO34_22315 NZ_NPMD01000013.1 Protein Homology CDS 10600 10917 . + 0 ID=cds-WP_023196385.1;Parent=gene-CCO34_RS22325;Dbxref=GenBank:WP_023196385.1;Name=WP_023196385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=CCO34_RS22325;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_023196385.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 10914 11255 . + . ID=gene-CCO34_RS22330;Name=CCO34_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22330;old_locus_tag=CCO34_22320 NZ_NPMD01000013.1 Protein Homology CDS 10914 11255 . + 0 ID=cds-WP_000560822.1;Parent=gene-CCO34_RS22330;Dbxref=GenBank:WP_000560822.1;Name=WP_000560822.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=CCO34_RS22330;product=helix-turn-helix domain-containing protein;protein_id=WP_000560822.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 11258 12145 . - . ID=gene-CCO34_RS22335;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=CCO34_RS22335;old_locus_tag=CCO34_22325 NZ_NPMD01000013.1 Protein Homology CDS 11258 12145 . - 0 ID=cds-WP_000365798.1;Parent=gene-CCO34_RS22335;Dbxref=GenBank:WP_000365798.1;Name=WP_000365798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=CCO34_RS22335;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365798.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 12310 13785 . + . ID=gene-CCO34_RS22340;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CCO34_RS22340;old_locus_tag=CCO34_22330 NZ_NPMD01000013.1 Protein Homology CDS 12310 13785 . + 0 ID=cds-WP_000024932.1;Parent=gene-CCO34_RS22340;Dbxref=GenBank:WP_000024932.1;Name=WP_000024932.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=CCO34_RS22340;product=ketol-acid reductoisomerase;protein_id=WP_000024932.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 13877 14158 . - . ID=gene-CCO34_RS22345;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=CCO34_RS22345;old_locus_tag=CCO34_22335 NZ_NPMD01000013.1 Protein Homology CDS 13877 14158 . - 0 ID=cds-WP_001096806.1;Parent=gene-CCO34_RS22345;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=CCO34_RS22345;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11 NZ_NPMD01000013.1 RefSeq pseudogene 14352 14507 . + . ID=gene-CCO34_RS26115;Name=CCO34_RS26115;end_range=14507,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26115;partial=true;pseudo=true NZ_NPMD01000013.1 Protein Homology CDS 14352 14507 . + 0 ID=cds-CCO34_RS26115;Parent=gene-CCO34_RS26115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14507,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=CCO34_RS26115;partial=true;product=Crp/Fnr family transcriptional regulator;pseudo=true;transl_table=11 NZ_NPMD01000013.1 RefSeq pseudogene 14459 14596 . + . ID=gene-CCO34_RS22355;Name=CCO34_RS22355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS22355;old_locus_tag=CCO34_22345;partial=true;pseudo=true;start_range=.,14459 NZ_NPMD01000013.1 Protein Homology CDS 14459 14596 . + 0 ID=cds-CCO34_RS22355;Parent=gene-CCO34_RS22355;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=CCO34_RS22355;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;start_range=.,14459;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 14696 16720 . + . ID=gene-CCO34_RS22360;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=CCO34_RS22360;old_locus_tag=CCO34_22350 NZ_NPMD01000013.1 Protein Homology CDS 14696 16720 . + 0 ID=cds-WP_001238842.1;Parent=gene-CCO34_RS22360;Dbxref=GenBank:WP_001238842.1;Name=WP_001238842.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=CCO34_RS22360;product=DNA helicase Rep;protein_id=WP_001238842.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 16760 18241 . - . ID=gene-CCO34_RS22365;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=CCO34_RS22365;old_locus_tag=CCO34_22355 NZ_NPMD01000013.1 Protein Homology CDS 16760 18241 . - 0 ID=cds-WP_001089451.1;Parent=gene-CCO34_RS22365;Dbxref=GenBank:WP_001089451.1;Name=WP_001089451.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=CCO34_RS22365;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089451.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 18378 19643 . - . ID=gene-CCO34_RS22375;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=CCO34_RS22375;old_locus_tag=CCO34_22365 NZ_NPMD01000013.1 Protein Homology CDS 18378 19643 . - 0 ID=cds-WP_000047525.1;Parent=gene-CCO34_RS22375;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=CCO34_RS22375;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 19787 20116 . + . ID=gene-CCO34_RS22380;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CCO34_RS22380;old_locus_tag=CCO34_22370 NZ_NPMD01000013.1 Protein Homology CDS 19787 20116 . + 0 ID=cds-WP_001280776.1;Parent=gene-CCO34_RS22380;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=CCO34_RS22380;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 20364 20447 . + . ID=gene-CCO34_RS25955;Name=CCO34_RS25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25955 NZ_NPMD01000013.1 Protein Homology CDS 20364 20447 . + 0 ID=cds-WP_134820045.1;Parent=gene-CCO34_RS25955;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=CCO34_RS25955;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 20535 21794 . + . ID=gene-CCO34_RS22385;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CCO34_RS22385;old_locus_tag=CCO34_22375 NZ_NPMD01000013.1 Protein Homology CDS 20535 21794 . + 0 ID=cds-WP_001054532.1;Parent=gene-CCO34_RS22385;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=CCO34_RS22385;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 22024 23127 . + . ID=gene-CCO34_RS22390;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=CCO34_RS22390;old_locus_tag=CCO34_22380 NZ_NPMD01000013.1 Protein Homology CDS 22024 23127 . + 0 ID=cds-WP_000771937.1;Parent=gene-CCO34_RS22390;Dbxref=GenBank:WP_000771937.1;Name=WP_000771937.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=CCO34_RS22390;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771937.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 23139 24185 . + . ID=gene-CCO34_RS22395;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=CCO34_RS22395;old_locus_tag=CCO34_22385 NZ_NPMD01000013.1 Protein Homology CDS 23139 24185 . + 0 ID=cds-WP_000193413.1;Parent=gene-CCO34_RS22395;Dbxref=GenBank:WP_000193413.1;Name=WP_000193413.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=CCO34_RS22395;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193413.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 24241 25371 . + . ID=gene-CCO34_RS22400;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CCO34_RS22400;old_locus_tag=CCO34_22390 NZ_NPMD01000013.1 Protein Homology CDS 24241 25371 . + 0 ID=cds-WP_000866685.1;Parent=gene-CCO34_RS22400;Dbxref=GenBank:WP_000866685.1;Name=WP_000866685.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=CCO34_RS22400;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866685.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 25368 26630 . + . ID=gene-CCO34_RS22405;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=CCO34_RS22405;old_locus_tag=CCO34_22395 NZ_NPMD01000013.1 Protein Homology CDS 25368 26630 . + 0 ID=cds-WP_000011236.1;Parent=gene-CCO34_RS22405;Dbxref=GenBank:WP_000011236.1;Name=WP_000011236.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=CCO34_RS22405;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000011236.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 26630 27697 . + . ID=gene-CCO34_RS22410;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=CCO34_RS22410;old_locus_tag=CCO34_22400 NZ_NPMD01000013.1 Protein Homology CDS 26630 27697 . + 0 ID=cds-WP_000822143.1;Parent=gene-CCO34_RS22410;Dbxref=GenBank:WP_000822143.1;Name=WP_000822143.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=CCO34_RS22410;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822143.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 27640 27954 . + . ID=gene-CCO34_RS26065;Name=CCO34_RS26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26065;old_locus_tag=CCO34_22405 NZ_NPMD01000013.1 Protein Homology CDS 27640 27954 . + 0 ID=cds-WP_223151143.1;Parent=gene-CCO34_RS26065;Dbxref=GenBank:WP_223151143.1;Name=WP_223151143.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=CCO34_RS26065;product=sugar phosphate nucleotidyltransferase;protein_id=WP_223151143.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 27932 28609 . + . ID=gene-CCO34_RS22420;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=CCO34_RS22420;old_locus_tag=CCO34_22410 NZ_NPMD01000013.1 Protein Homology CDS 27932 28609 . + 0 ID=cds-WP_001145156.1;Parent=gene-CCO34_RS22420;Dbxref=GenBank:WP_001145156.1;Name=WP_001145156.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=CCO34_RS22420;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145156.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 28614 29744 . + . ID=gene-CCO34_RS22425;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=CCO34_RS22425;old_locus_tag=CCO34_22415 NZ_NPMD01000013.1 Protein Homology CDS 28614 29744 . + 0 ID=cds-WP_000612076.1;Parent=gene-CCO34_RS22425;Dbxref=GenBank:WP_000612076.1;Name=WP_000612076.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=CCO34_RS22425;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612076.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 29746 30996 . + . ID=gene-CCO34_RS22430;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=CCO34_RS22430;old_locus_tag=CCO34_22420 NZ_NPMD01000013.1 Protein Homology CDS 29746 30996 . + 0 ID=cds-WP_023218508.1;Parent=gene-CCO34_RS22430;Dbxref=GenBank:WP_023218508.1;Name=WP_023218508.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=CCO34_RS22430;product=lipid III flippase WzxE;protein_id=WP_023218508.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 30993 32072 . + . ID=gene-CCO34_RS22435;Name=CCO34_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22435;old_locus_tag=CCO34_22425 NZ_NPMD01000013.1 Protein Homology CDS 30993 32072 . + 0 ID=cds-WP_021000943.1;Parent=gene-CCO34_RS22435;Dbxref=GenBank:WP_021000943.1;Name=WP_021000943.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=CCO34_RS22435;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_021000943.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 32069 33427 . + . ID=gene-CCO34_RS22440;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=CCO34_RS22440;old_locus_tag=CCO34_22430 NZ_NPMD01000013.1 Protein Homology CDS 32069 33427 . + 0 ID=cds-WP_000055605.1;Parent=gene-CCO34_RS22440;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=CCO34_RS22440;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 33424 34164 . + . ID=gene-CCO34_RS22445;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=CCO34_RS22445;old_locus_tag=CCO34_22435 NZ_NPMD01000013.1 Protein Homology CDS 33424 34164 . + 0 ID=cds-WP_000183617.1;Parent=gene-CCO34_RS22445;Dbxref=GenBank:WP_000183617.1;Name=WP_000183617.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=CCO34_RS22445;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183617.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 34371 35756 . + . ID=gene-CCO34_RS22450;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=CCO34_RS22450;old_locus_tag=CCO34_22440 NZ_NPMD01000013.1 Protein Homology CDS 34371 35756 . + 0 ID=cds-WP_000818376.1;Parent=gene-CCO34_RS22450;Dbxref=GenBank:WP_000818376.1;Name=WP_000818376.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=CCO34_RS22450;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818376.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 35859 35935 . + . ID=gene-CCO34_RS22455;Name=CCO34_RS22455;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS22455;old_locus_tag=CCO34_22445 NZ_NPMD01000013.1 tRNAscan-SE tRNA 35859 35935 . + . ID=rna-CCO34_RS22455;Parent=gene-CCO34_RS22455;anticodon=(pos:35893..35895);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22455;product=tRNA-Arg NZ_NPMD01000013.1 tRNAscan-SE exon 35859 35935 . + . ID=exon-CCO34_RS22455-1;Parent=rna-CCO34_RS22455;anticodon=(pos:35893..35895);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22455;product=tRNA-Arg NZ_NPMD01000013.1 RefSeq gene 35990 36065 . + . ID=gene-CCO34_RS22460;Name=CCO34_RS22460;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS22460;old_locus_tag=CCO34_22450 NZ_NPMD01000013.1 tRNAscan-SE tRNA 35990 36065 . + . ID=rna-CCO34_RS22460;Parent=gene-CCO34_RS22460;anticodon=(pos:36023..36025);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22460;product=tRNA-His NZ_NPMD01000013.1 tRNAscan-SE exon 35990 36065 . + . ID=exon-CCO34_RS22460-1;Parent=rna-CCO34_RS22460;anticodon=(pos:36023..36025);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22460;product=tRNA-His NZ_NPMD01000013.1 RefSeq gene 36086 36172 . + . ID=gene-CCO34_RS22465;Name=CCO34_RS22465;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS22465;old_locus_tag=CCO34_22455 NZ_NPMD01000013.1 tRNAscan-SE tRNA 36086 36172 . + . ID=rna-CCO34_RS22465;Parent=gene-CCO34_RS22465;anticodon=(pos:36120..36122);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22465;product=tRNA-Leu NZ_NPMD01000013.1 tRNAscan-SE exon 36086 36172 . + . ID=exon-CCO34_RS22465-1;Parent=rna-CCO34_RS22465;anticodon=(pos:36120..36122);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22465;product=tRNA-Leu NZ_NPMD01000013.1 RefSeq gene 36215 36291 . + . ID=gene-CCO34_RS22470;Name=CCO34_RS22470;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS22470;old_locus_tag=CCO34_22460 NZ_NPMD01000013.1 tRNAscan-SE tRNA 36215 36291 . + . ID=rna-CCO34_RS22470;Parent=gene-CCO34_RS22470;anticodon=(pos:36249..36251);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22470;product=tRNA-Pro NZ_NPMD01000013.1 tRNAscan-SE exon 36215 36291 . + . ID=exon-CCO34_RS22470-1;Parent=rna-CCO34_RS22470;anticodon=(pos:36249..36251);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS22470;product=tRNA-Pro NZ_NPMD01000013.1 RefSeq gene 36873 38069 . - . ID=gene-CCO34_RS22475;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CCO34_RS22475;old_locus_tag=CCO34_22465 NZ_NPMD01000013.1 Protein Homology CDS 36873 38069 . - 0 ID=cds-WP_001546072.1;Parent=gene-CCO34_RS22475;Dbxref=GenBank:WP_001546072.1;Name=WP_001546072.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=CCO34_RS22475;product=protoheme IX biogenesis protein HemY;protein_id=WP_001546072.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 38072 39241 . - . ID=gene-CCO34_RS22480;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=CCO34_RS22480;old_locus_tag=CCO34_22470 NZ_NPMD01000013.1 Protein Homology CDS 38072 39241 . - 0 ID=cds-WP_023228595.1;Parent=gene-CCO34_RS22480;Dbxref=GenBank:WP_023228595.1;Name=WP_023228595.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=CCO34_RS22480;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_023228595.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 39263 40003 . - . ID=gene-CCO34_RS22485;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=CCO34_RS22485;old_locus_tag=CCO34_22475 NZ_NPMD01000013.1 Protein Homology CDS 39263 40003 . - 0 ID=cds-WP_023228594.1;Parent=gene-CCO34_RS22485;Dbxref=GenBank:WP_023228594.1;Name=WP_023228594.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=CCO34_RS22485;product=uroporphyrinogen-III synthase;protein_id=WP_023228594.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 40000 40941 . - . ID=gene-CCO34_RS22490;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CCO34_RS22490;old_locus_tag=CCO34_22480 NZ_NPMD01000013.1 Protein Homology CDS 40000 40941 . - 0 ID=cds-WP_001521319.1;Parent=gene-CCO34_RS22490;Dbxref=GenBank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=CCO34_RS22490;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 41318 43864 . + . ID=gene-CCO34_RS22495;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=CCO34_RS22495;old_locus_tag=CCO34_22485 NZ_NPMD01000013.1 Protein Homology CDS 41318 43864 . + 0 ID=cds-WP_000281718.1;Parent=gene-CCO34_RS22495;Dbxref=GenBank:WP_000281718.1;Name=WP_000281718.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=CCO34_RS22495;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 43942 44262 . - . ID=gene-CCO34_RS22500;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=CCO34_RS22500;old_locus_tag=CCO34_22490 NZ_NPMD01000013.1 Protein Homology CDS 43942 44262 . - 0 ID=cds-WP_000999919.1;Parent=gene-CCO34_RS22500;Dbxref=GenBank:WP_000999919.1;Name=WP_000999919.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=CCO34_RS22500;product=iron donor protein CyaY;protein_id=WP_000999919.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 44332 44721 . - . ID=gene-CCO34_RS22505;Name=CCO34_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22505;old_locus_tag=CCO34_22495 NZ_NPMD01000013.1 Protein Homology CDS 44332 44721 . - 0 ID=cds-WP_001124436.1;Parent=gene-CCO34_RS22505;Dbxref=GenBank:WP_001124436.1;Name=WP_001124436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=CCO34_RS22505;product=DUF3021 family protein;protein_id=WP_001124436.1;transl_table=11 NZ_NPMD01000013.1 RefSeq pseudogene 44700 45008 . - . ID=gene-CCO34_RS22510;Name=CCO34_RS22510;end_range=45008,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS22510;old_locus_tag=CCO34_22500;partial=true;pseudo=true NZ_NPMD01000013.1 Protein Homology CDS 44700 45008 . - 0 ID=cds-CCO34_RS22510;Parent=gene-CCO34_RS22510;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=45008,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=CCO34_RS22510;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 44978 45229 . - . ID=gene-CCO34_RS25625;Name=CCO34_RS25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25625;old_locus_tag=CCO34_22505 NZ_NPMD01000013.1 GeneMarkS-2+ CDS 44978 45229 . - 0 ID=cds-WP_001594384.1;Parent=gene-CCO34_RS25625;Dbxref=GenBank:WP_001594384.1;Name=WP_001594384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25625;product=hypothetical protein;protein_id=WP_001594384.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 45415 45618 . + . ID=gene-CCO34_RS22520;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=CCO34_RS22520;old_locus_tag=CCO34_22510 NZ_NPMD01000013.1 Protein Homology CDS 45415 45618 . + 0 ID=cds-WP_000799903.1;Parent=gene-CCO34_RS22520;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=CCO34_RS22520;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 45655 46479 . + . ID=gene-CCO34_RS22525;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=CCO34_RS22525;old_locus_tag=CCO34_22515 NZ_NPMD01000013.1 Protein Homology CDS 45655 46479 . + 0 ID=cds-WP_001160671.1;Parent=gene-CCO34_RS22525;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=CCO34_RS22525;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 46476 47183 . + . ID=gene-CCO34_RS22530;Name=CCO34_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22530;old_locus_tag=CCO34_22520 NZ_NPMD01000013.1 Protein Homology CDS 46476 47183 . + 0 ID=cds-WP_000812763.1;Parent=gene-CCO34_RS22530;Dbxref=GenBank:WP_000812763.1;Name=WP_000812763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=CCO34_RS22530;product=DUF484 domain-containing protein;protein_id=WP_000812763.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 47180 48082 . + . ID=gene-CCO34_RS22535;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CCO34_RS22535;old_locus_tag=CCO34_22525 NZ_NPMD01000013.1 Protein Homology CDS 47180 48082 . + 0 ID=cds-WP_000132868.1;Parent=gene-CCO34_RS22535;Dbxref=GenBank:WP_000132868.1;Name=WP_000132868.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=CCO34_RS22535;product=tyrosine recombinase XerC;protein_id=WP_000132868.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 48082 48798 . + . ID=gene-CCO34_RS22540;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=CCO34_RS22540;old_locus_tag=CCO34_22530 NZ_NPMD01000013.1 Protein Homology CDS 48082 48798 . + 0 ID=cds-WP_001213560.1;Parent=gene-CCO34_RS22540;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=CCO34_RS22540;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 48934 51096 . + . ID=gene-CCO34_RS22545;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=CCO34_RS22545;old_locus_tag=CCO34_22535 NZ_NPMD01000013.1 Protein Homology CDS 48934 51096 . + 0 ID=cds-WP_000383436.1;Parent=gene-CCO34_RS22545;Dbxref=GenBank:WP_000383436.1;Name=WP_000383436.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=CCO34_RS22545;product=DNA helicase II;protein_id=WP_000383436.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 51356 51412 . + . ID=gene-CCO34_RS25965;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=CCO34_RS25965 NZ_NPMD01000013.1 Protein Homology CDS 51356 51412 . + 0 ID=cds-WP_212723238.1;Parent=gene-CCO34_RS25965;Dbxref=GenBank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=CCO34_RS25965;product=YsgD/CorL family protein;protein_id=WP_212723238.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 51568 52518 . + . ID=gene-CCO34_RS22555;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=CCO34_RS22555;old_locus_tag=CCO34_22545 NZ_NPMD01000013.1 Protein Homology CDS 51568 52518 . + 0 ID=cds-WP_000947139.1;Parent=gene-CCO34_RS22555;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=CCO34_RS22555;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 52566 52946 . - . ID=gene-CCO34_RS22560;Name=CCO34_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22560;old_locus_tag=CCO34_22550 NZ_NPMD01000013.1 Protein Homology CDS 52566 52946 . - 0 ID=cds-WP_000619297.1;Parent=gene-CCO34_RS22560;Dbxref=GenBank:WP_000619297.1;Name=WP_000619297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727015.1;locus_tag=CCO34_RS22560;product=hypothetical protein;protein_id=WP_000619297.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 53121 53417 . + . ID=gene-CCO34_RS22565;Name=CCO34_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22565;old_locus_tag=CCO34_22555 NZ_NPMD01000013.1 Protein Homology CDS 53121 53417 . + 0 ID=cds-WP_001170054.1;Parent=gene-CCO34_RS22565;Dbxref=GenBank:WP_001170054.1;Name=WP_001170054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=CCO34_RS22565;product=hypothetical protein;protein_id=WP_001170054.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 53457 54344 . - . ID=gene-CCO34_RS22570;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO34_RS22570;old_locus_tag=CCO34_22560 NZ_NPMD01000013.1 Protein Homology CDS 53457 54344 . - 0 ID=cds-WP_000339081.1;Parent=gene-CCO34_RS22570;Dbxref=GenBank:WP_000339081.1;Name=WP_000339081.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=CCO34_RS22570;product=EamA family transporter RarD;protein_id=WP_000339081.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 54388 54855 . - . ID=gene-CCO34_RS22575;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=CCO34_RS22575;old_locus_tag=CCO34_22565 NZ_NPMD01000013.1 Protein Homology CDS 54388 54855 . - 0 ID=cds-WP_001277136.1;Parent=gene-CCO34_RS22575;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=CCO34_RS22575;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 55020 55889 . + . ID=gene-CCO34_RS22580;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=CCO34_RS22580;old_locus_tag=CCO34_22570 NZ_NPMD01000013.1 Protein Homology CDS 55020 55889 . + 0 ID=cds-WP_001201692.1;Parent=gene-CCO34_RS22580;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=CCO34_RS22580;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 55973 57802 . + . ID=gene-CCO34_RS22585;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CCO34_RS22585;old_locus_tag=CCO34_22575 NZ_NPMD01000013.1 Protein Homology CDS 55973 57802 . + 0 ID=cds-WP_001533487.1;Parent=gene-CCO34_RS22585;Dbxref=GenBank:WP_001533487.1;Name=WP_001533487.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=CCO34_RS22585;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001533487.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 57866 58486 . + . ID=gene-CCO34_RS22590;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=CCO34_RS22590;old_locus_tag=CCO34_22580 NZ_NPMD01000013.1 Protein Homology CDS 57866 58486 . + 0 ID=cds-WP_000980081.1;Parent=gene-CCO34_RS22590;Dbxref=GenBank:WP_000980081.1;Name=WP_000980081.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=CCO34_RS22590;product=threonine export protein RhtC;protein_id=WP_000980081.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 58526 59146 . - . ID=gene-CCO34_RS22595;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=CCO34_RS22595;old_locus_tag=CCO34_22585 NZ_NPMD01000013.1 Protein Homology CDS 58526 59146 . - 0 ID=cds-WP_000142521.1;Parent=gene-CCO34_RS22595;Dbxref=GenBank:WP_000142521.1;Name=WP_000142521.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=CCO34_RS22595;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142521.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 59257 60273 . + . ID=gene-CCO34_RS22600;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=CCO34_RS22600;old_locus_tag=CCO34_22590 NZ_NPMD01000013.1 Protein Homology CDS 59257 60273 . + 0 ID=cds-WP_000487685.1;Parent=gene-CCO34_RS22600;Dbxref=GenBank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=CCO34_RS22600;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 60289 61089 . + . ID=gene-CCO34_RS22605;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=CCO34_RS22605;old_locus_tag=CCO34_22595 NZ_NPMD01000013.1 Protein Homology CDS 60289 61089 . + 0 ID=cds-WP_000285336.1;Parent=gene-CCO34_RS22605;Dbxref=GenBank:WP_000285336.1;Name=WP_000285336.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=CCO34_RS22605;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285336.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 61170 62069 . + . ID=gene-CCO34_RS22610;Name=CCO34_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22610;old_locus_tag=CCO34_22600 NZ_NPMD01000013.1 Protein Homology CDS 61170 62069 . + 0 ID=cds-WP_001196254.1;Parent=gene-CCO34_RS22610;Dbxref=GenBank:WP_001196254.1;Name=WP_001196254.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=CCO34_RS22610;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196254.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 61957 62910 . - . ID=gene-CCO34_RS22615;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=CCO34_RS22615;old_locus_tag=CCO34_22605 NZ_NPMD01000013.1 Protein Homology CDS 61957 62910 . - 0 ID=cds-WP_000569786.1;Parent=gene-CCO34_RS22615;Dbxref=GenBank:WP_000569786.1;Name=WP_000569786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=CCO34_RS22615;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 63159 65423 . + . ID=gene-CCO34_RS22620;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CCO34_RS22620;old_locus_tag=CCO34_22610 NZ_NPMD01000013.1 Protein Homology CDS 63159 65423 . + 0 ID=cds-WP_000154175.1;Parent=gene-CCO34_RS22620;Dbxref=GenBank:WP_000154175.1;Name=WP_000154175.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=CCO34_RS22620;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154175.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 65758 67101 . + . ID=gene-CCO34_RS22625;Name=CCO34_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22625;old_locus_tag=CCO34_22615 NZ_NPMD01000013.1 Protein Homology CDS 65758 67101 . + 0 ID=cds-WP_000017948.1;Parent=gene-CCO34_RS22625;Dbxref=GenBank:WP_000017948.1;Name=WP_000017948.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=CCO34_RS22625;product=anaerobic sulfatase maturase;protein_id=WP_000017948.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 67181 67993 . - . ID=gene-CCO34_RS22630;Name=CCO34_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22630;old_locus_tag=CCO34_22620 NZ_NPMD01000013.1 Protein Homology CDS 67181 67993 . - 0 ID=cds-WP_000213959.1;Parent=gene-CCO34_RS22630;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=CCO34_RS22630;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 68252 69013 . + . ID=gene-CCO34_RS22635;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=CCO34_RS22635;old_locus_tag=CCO34_22625 NZ_NPMD01000013.1 Protein Homology CDS 68252 69013 . + 0 ID=cds-WP_000045169.1;Parent=gene-CCO34_RS22635;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=CCO34_RS22635;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 69153 70583 . + . ID=gene-CCO34_RS22640;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=CCO34_RS22640;old_locus_tag=CCO34_22630 NZ_NPMD01000013.1 Protein Homology CDS 69153 70583 . + 0 ID=cds-WP_000355562.1;Parent=gene-CCO34_RS22640;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=CCO34_RS22640;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 70679 71434 . + . ID=gene-CCO34_RS22645;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=CCO34_RS22645;old_locus_tag=CCO34_22635 NZ_NPMD01000013.1 Protein Homology CDS 70679 71434 . + 0 ID=cds-WP_000229009.1;Parent=gene-CCO34_RS22645;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=CCO34_RS22645;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 71444 72049 . + . ID=gene-CCO34_RS22650;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=CCO34_RS22650;old_locus_tag=CCO34_22640 NZ_NPMD01000013.1 Protein Homology CDS 71444 72049 . + 0 ID=cds-WP_001116088.1;Parent=gene-CCO34_RS22650;Dbxref=GenBank:WP_001116088.1;Name=WP_001116088.1;Ontology_term=GO:0032150;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process from chorismate|0032150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=CCO34_RS22650;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116088.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 72046 73686 . + . ID=gene-CCO34_RS22655;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=CCO34_RS22655;old_locus_tag=CCO34_22645 NZ_NPMD01000013.1 Protein Homology CDS 72046 73686 . + 0 ID=cds-WP_000187559.1;Parent=gene-CCO34_RS22655;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=CCO34_RS22655;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 73892 74146 . + . ID=gene-CCO34_RS22660;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=CCO34_RS22660;old_locus_tag=CCO34_22650 NZ_NPMD01000013.1 Protein Homology CDS 73892 74146 . + 0 ID=cds-WP_000508972.1;Parent=gene-CCO34_RS22660;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=CCO34_RS22660;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 74150 74698 . + . ID=gene-CCO34_RS22665;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=CCO34_RS22665;old_locus_tag=CCO34_22655 NZ_NPMD01000013.1 Protein Homology CDS 74150 74698 . + 0 ID=cds-WP_000459612.1;Parent=gene-CCO34_RS22665;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=CCO34_RS22665;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 74701 75480 . + . ID=gene-CCO34_RS22670;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=CCO34_RS22670;old_locus_tag=CCO34_22660 NZ_NPMD01000013.1 Protein Homology CDS 74701 75480 . + 0 ID=cds-WP_000257554.1;Parent=gene-CCO34_RS22670;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=CCO34_RS22670;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 75522 76304 . + . ID=gene-CCO34_RS22675;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=CCO34_RS22675;old_locus_tag=CCO34_22665 NZ_NPMD01000013.1 Protein Homology CDS 75522 76304 . + 0 ID=cds-WP_000459642.1;Parent=gene-CCO34_RS22675;Dbxref=GenBank:WP_000459642.1;Name=WP_000459642.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=CCO34_RS22675;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459642.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 76312 76800 . - . ID=gene-CCO34_RS22680;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=CCO34_RS22680;old_locus_tag=CCO34_22670 NZ_NPMD01000013.1 Protein Homology CDS 76312 76800 . - 0 ID=cds-WP_001192410.1;Parent=gene-CCO34_RS22680;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=CCO34_RS22680;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 76986 78464 . + . ID=gene-CCO34_RS22685;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=CCO34_RS22685;old_locus_tag=CCO34_22675 NZ_NPMD01000013.1 Protein Homology CDS 76986 78464 . + 0 ID=cds-WP_000339760.1;Parent=gene-CCO34_RS22685;Dbxref=GenBank:WP_000339760.1;Name=WP_000339760.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=CCO34_RS22685;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339760.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 78550 79251 . + . ID=gene-CCO34_RS22690;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=CCO34_RS22690;old_locus_tag=CCO34_22680 NZ_NPMD01000013.1 Protein Homology CDS 78550 79251 . + 0 ID=cds-WP_000209837.1;Parent=gene-CCO34_RS22690;Dbxref=GenBank:WP_000209837.1;Name=WP_000209837.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=CCO34_RS22690;product=NAD(P)H-flavin reductase;protein_id=WP_000209837.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 79505 81328 . + . ID=gene-CCO34_RS22695;Name=CCO34_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22695;old_locus_tag=CCO34_22685 NZ_NPMD01000013.1 Protein Homology CDS 79505 81328 . + 0 ID=cds-WP_000669902.1;Parent=gene-CCO34_RS22695;Dbxref=GenBank:WP_000669902.1;Name=WP_000669902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=CCO34_RS22695;product=aryl-sulfate sulfotransferase;protein_id=WP_000669902.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 81525 82688 . - . ID=gene-CCO34_RS22700;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=CCO34_RS22700;old_locus_tag=CCO34_22690 NZ_NPMD01000013.1 Protein Homology CDS 81525 82688 . - 0 ID=cds-WP_000438778.1;Parent=gene-CCO34_RS22700;Dbxref=GenBank:WP_000438778.1;Name=WP_000438778.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=CCO34_RS22700;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438778.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 82698 84887 . - . ID=gene-CCO34_RS22705;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CCO34_RS22705;old_locus_tag=CCO34_22695 NZ_NPMD01000013.1 Protein Homology CDS 82698 84887 . - 0 ID=cds-WP_000966008.1;Parent=gene-CCO34_RS22705;Dbxref=GenBank:WP_000966008.1;Name=WP_000966008.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=CCO34_RS22705;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000966008.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 85077 86408 . + . ID=gene-CCO34_RS22710;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=CCO34_RS22710;old_locus_tag=CCO34_22700 NZ_NPMD01000013.1 Protein Homology CDS 85077 86408 . + 0 ID=cds-WP_000444529.1;Parent=gene-CCO34_RS22710;Dbxref=GenBank:WP_000444529.1;Name=WP_000444529.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=CCO34_RS22710;product=Xaa-Pro dipeptidase;protein_id=WP_000444529.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 86408 87022 . + . ID=gene-CCO34_RS22715;Name=CCO34_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22715;old_locus_tag=CCO34_22705 NZ_NPMD01000013.1 Protein Homology CDS 86408 87022 . + 0 ID=cds-WP_000378897.1;Parent=gene-CCO34_RS22715;Dbxref=GenBank:WP_000378897.1;Name=WP_000378897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=CCO34_RS22715;product=IMPACT family protein;protein_id=WP_000378897.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 87061 88512 . + . ID=gene-CCO34_RS22720;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=CCO34_RS22720;old_locus_tag=CCO34_22710 NZ_NPMD01000013.1 Protein Homology CDS 87061 88512 . + 0 ID=cds-WP_000545688.1;Parent=gene-CCO34_RS22720;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=CCO34_RS22720;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11 NZ_NPMD01000013.1 RefSeq gene 88524 89069 . + . ID=gene-CCO34_RS22725;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=CCO34_RS22725;old_locus_tag=CCO34_22715 NZ_NPMD01000013.1 Protein Homology CDS 88524 89069 . + 0 ID=cds-WP_000853982.1;Parent=gene-CCO34_RS22725;Dbxref=GenBank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=CCO34_RS22725;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11 ##sequence-region NZ_NPMD01000014.1 1 77240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000014.1 RefSeq region 1 77240 . + . ID=NZ_NPMD01000014.1:1..77240;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000014.1 RefSeq gene 1 127 . - . ID=gene-CCO34_RS22735;Name=CCO34_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22735;old_locus_tag=CCO34_22725;partial=true;start_range=.,1 NZ_NPMD01000014.1 Protein Homology CDS 1 127 . - 0 ID=cds-WP_116781764.1;Parent=gene-CCO34_RS22735;Dbxref=GenBank:WP_116781764.1;Name=WP_116781764.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO34_RS22735;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_116781764.1;start_range=.,1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 133 1533 . - . ID=gene-CCO34_RS22740;Name=CCO34_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22740;old_locus_tag=CCO34_22730 NZ_NPMD01000014.1 Protein Homology CDS 133 1533 . - 0 ID=cds-WP_000724469.1;Parent=gene-CCO34_RS22740;Dbxref=GenBank:WP_000724469.1;Name=WP_000724469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=CCO34_RS22740;product=cytochrome-c peroxidase;protein_id=WP_000724469.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 1723 2355 . - . ID=gene-CCO34_RS22745;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=CCO34_RS22745;old_locus_tag=CCO34_22735 NZ_NPMD01000014.1 Protein Homology CDS 1723 2355 . - 0 ID=cds-WP_000595422.1;Parent=gene-CCO34_RS22745;Dbxref=GenBank:WP_000595422.1;Name=WP_000595422.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=CCO34_RS22745;product=molecular chaperone TorD;protein_id=WP_000595422.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 2348 4900 . - . ID=gene-CCO34_RS22750;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=CCO34_RS22750;old_locus_tag=CCO34_22740 NZ_NPMD01000014.1 Protein Homology CDS 2348 4900 . - 0 ID=cds-WP_000790671.1;Parent=gene-CCO34_RS22750;Dbxref=GenBank:WP_000790671.1;Name=WP_000790671.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=CCO34_RS22750;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_000790671.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 4890 6074 . - . ID=gene-CCO34_RS22755;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=CCO34_RS22755;old_locus_tag=CCO34_22745 NZ_NPMD01000014.1 Protein Homology CDS 4890 6074 . - 0 ID=cds-WP_001230254.1;Parent=gene-CCO34_RS22755;Dbxref=GenBank:WP_001230254.1;Name=WP_001230254.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=CCO34_RS22755;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230254.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 6204 6896 . + . ID=gene-CCO34_RS22760;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=CCO34_RS22760;old_locus_tag=CCO34_22750 NZ_NPMD01000014.1 Protein Homology CDS 6204 6896 . + 0 ID=cds-WP_001562512.1;Parent=gene-CCO34_RS22760;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=CCO34_RS22760;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 6869 7909 . - . ID=gene-CCO34_RS22765;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=CCO34_RS22765;old_locus_tag=CCO34_22755 NZ_NPMD01000014.1 Protein Homology CDS 6869 7909 . - 0 ID=cds-WP_001202040.1;Parent=gene-CCO34_RS22765;Dbxref=GenBank:WP_001202040.1;Name=WP_001202040.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=CCO34_RS22765;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001202040.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 7989 10724 . + . ID=gene-CCO34_RS22770;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=CCO34_RS22770;old_locus_tag=CCO34_22760 NZ_NPMD01000014.1 Protein Homology CDS 7989 10724 . + 0 ID=cds-WP_000106944.1;Parent=gene-CCO34_RS22770;Dbxref=GenBank:WP_000106944.1;Name=WP_000106944.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=CCO34_RS22770;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_000106944.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 10750 12087 . - . ID=gene-CCO34_RS22775;Name=CCO34_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22775;old_locus_tag=CCO34_22765 NZ_NPMD01000014.1 Protein Homology CDS 10750 12087 . - 0 ID=cds-WP_000253524.1;Parent=gene-CCO34_RS22775;Dbxref=GenBank:WP_000253524.1;Name=WP_000253524.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=CCO34_RS22775;product=MFS transporter;protein_id=WP_000253524.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 12172 13320 . - . ID=gene-CCO34_RS22780;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=CCO34_RS22780;old_locus_tag=CCO34_22770 NZ_NPMD01000014.1 Protein Homology CDS 12172 13320 . - 0 ID=cds-WP_000704735.1;Parent=gene-CCO34_RS22780;Dbxref=GenBank:WP_000704735.1;Name=WP_000704735.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=CCO34_RS22780;product=galactonate dehydratase;protein_id=WP_000704735.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 13317 13934 . - . ID=gene-CCO34_RS22785;Name=CCO34_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22785;old_locus_tag=CCO34_22775 NZ_NPMD01000014.1 Protein Homology CDS 13317 13934 . - 0 ID=cds-WP_001198739.1;Parent=gene-CCO34_RS22785;Dbxref=GenBank:WP_001198739.1;Name=WP_001198739.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=CCO34_RS22785;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198739.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 13918 14796 . - . ID=gene-CCO34_RS22790;Name=CCO34_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22790;old_locus_tag=CCO34_22780 NZ_NPMD01000014.1 Protein Homology CDS 13918 14796 . - 0 ID=cds-WP_000127129.1;Parent=gene-CCO34_RS22790;Dbxref=GenBank:WP_000127129.1;Name=WP_000127129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=CCO34_RS22790;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127129.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 14793 15482 . - . ID=gene-CCO34_RS22795;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=CCO34_RS22795;old_locus_tag=CCO34_22785 NZ_NPMD01000014.1 Protein Homology CDS 14793 15482 . - 0 ID=cds-WP_000174317.1;Parent=gene-CCO34_RS22795;Dbxref=GenBank:WP_000174317.1;Name=WP_000174317.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=CCO34_RS22795;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174317.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 15743 16588 . - . ID=gene-CCO34_RS22800;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=CCO34_RS22800;old_locus_tag=CCO34_22790 NZ_NPMD01000014.1 Protein Homology CDS 15743 16588 . - 0 ID=cds-WP_000985570.1;Parent=gene-CCO34_RS22800;Dbxref=GenBank:WP_000985570.1;Name=WP_000985570.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=CCO34_RS22800;product=sugar-phosphatase;protein_id=WP_000985570.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 16893 18155 . + . ID=gene-CCO34_RS22805;Name=CCO34_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22805;old_locus_tag=CCO34_22795 NZ_NPMD01000014.1 Protein Homology CDS 16893 18155 . + 0 ID=cds-WP_000061257.1;Parent=gene-CCO34_RS22805;Dbxref=GenBank:WP_000061257.1;Name=WP_000061257.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=CCO34_RS22805;product=MFS transporter;protein_id=WP_000061257.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 18169 19362 . + . ID=gene-CCO34_RS22810;Name=CCO34_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22810;old_locus_tag=CCO34_22800 NZ_NPMD01000014.1 Protein Homology CDS 18169 19362 . + 0 ID=cds-WP_001736637.1;Parent=gene-CCO34_RS22810;Dbxref=GenBank:WP_001736637.1;Name=WP_001736637.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=CCO34_RS22810;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_001736637.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 19477 20373 . + . ID=gene-CCO34_RS22815;Name=CCO34_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22815;old_locus_tag=CCO34_22805 NZ_NPMD01000014.1 Protein Homology CDS 19477 20373 . + 0 ID=cds-WP_001054597.1;Parent=gene-CCO34_RS22815;Dbxref=GenBank:WP_001054597.1;Name=WP_001054597.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=CCO34_RS22815;product=LysR family transcriptional regulator;protein_id=WP_001054597.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 20392 22806 . - . ID=gene-CCO34_RS22820;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CCO34_RS22820;old_locus_tag=CCO34_22810 NZ_NPMD01000014.1 Protein Homology CDS 20392 22806 . - 0 ID=cds-WP_000072047.1;Parent=gene-CCO34_RS22820;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=CCO34_RS22820;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 22835 23908 . - . ID=gene-CCO34_RS22825;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CCO34_RS22825;old_locus_tag=CCO34_22815 NZ_NPMD01000014.1 Protein Homology CDS 22835 23908 . - 0 ID=cds-WP_000060081.1;Parent=gene-CCO34_RS22825;Dbxref=GenBank:WP_000060081.1;Name=WP_000060081.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=CCO34_RS22825;product=DNA replication/repair protein RecF;protein_id=WP_000060081.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 24056 25156 . - . ID=gene-CCO34_RS22830;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CCO34_RS22830;old_locus_tag=CCO34_22820 NZ_NPMD01000014.1 Protein Homology CDS 24056 25156 . - 0 ID=cds-WP_000673474.1;Parent=gene-CCO34_RS22830;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=CCO34_RS22830;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 25161 26561 . - . ID=gene-CCO34_RS22835;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CCO34_RS22835;old_locus_tag=CCO34_22825 NZ_NPMD01000014.1 Protein Homology CDS 25161 26561 . - 0 ID=cds-WP_000059093.1;Parent=gene-CCO34_RS22835;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=CCO34_RS22835;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 26901 26993 . + . ID=gene-CCO34_RS26285;Name=CCO34_RS26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26285 NZ_NPMD01000014.1 Protein Homology CDS 26901 26993 . + 0 ID=cds-WP_418142141.1;Parent=gene-CCO34_RS26285;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=CCO34_RS26285;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 27222 27362 . + . ID=gene-CCO34_RS22840;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CCO34_RS22840;old_locus_tag=CCO34_22830 NZ_NPMD01000014.1 Protein Homology CDS 27222 27362 . + 0 ID=cds-WP_000831330.1;Parent=gene-CCO34_RS22840;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=CCO34_RS22840;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 27379 27738 . + . ID=gene-CCO34_RS22845;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CCO34_RS22845;old_locus_tag=CCO34_22835 NZ_NPMD01000014.1 Protein Homology CDS 27379 27738 . + 0 ID=cds-WP_000239725.1;Parent=gene-CCO34_RS22845;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=CCO34_RS22845;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 27702 27959 . + . ID=gene-CCO34_RS22850;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CCO34_RS22850;old_locus_tag=CCO34_22840 NZ_NPMD01000014.1 Protein Homology CDS 27702 27959 . + 0 ID=cds-WP_001307474.1;Parent=gene-CCO34_RS22850;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=CCO34_RS22850;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 27962 29608 . + . ID=gene-CCO34_RS22855;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CCO34_RS22855;old_locus_tag=CCO34_22845 NZ_NPMD01000014.1 Protein Homology CDS 27962 29608 . + 0 ID=cds-WP_000378281.1;Parent=gene-CCO34_RS22855;Dbxref=GenBank:WP_000378281.1;Name=WP_000378281.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=CCO34_RS22855;product=membrane protein insertase YidC;protein_id=WP_000378281.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 29750 31114 . + . ID=gene-CCO34_RS22860;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CCO34_RS22860;old_locus_tag=CCO34_22850 NZ_NPMD01000014.1 Protein Homology CDS 29750 31114 . + 0 ID=cds-WP_000019081.1;Parent=gene-CCO34_RS22860;Dbxref=GenBank:WP_000019081.1;Name=WP_000019081.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=CCO34_RS22860;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000019081.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 31297 32484 . + . ID=gene-CCO34_RS22865;Name=CCO34_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22865;old_locus_tag=CCO34_22855 NZ_NPMD01000014.1 Protein Homology CDS 31297 32484 . + 0 ID=cds-WP_000819626.1;Parent=gene-CCO34_RS22865;Dbxref=GenBank:WP_000819626.1;Name=WP_000819626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608974.1;locus_tag=CCO34_RS22865;product=MFS transporter;protein_id=WP_000819626.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 32453 33412 . + . ID=gene-CCO34_RS22870;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=CCO34_RS22870;old_locus_tag=CCO34_22860 NZ_NPMD01000014.1 Protein Homology CDS 32453 33412 . + 0 ID=cds-WP_000749365.1;Parent=gene-CCO34_RS22870;Dbxref=GenBank:WP_000749365.1;Name=WP_000749365.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=CCO34_RS22870;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000749365.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 33570 34325 . + . ID=gene-CCO34_RS22875;Name=CCO34_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22875;old_locus_tag=CCO34_22865 NZ_NPMD01000014.1 Protein Homology CDS 33570 34325 . + 0 ID=cds-WP_000190678.1;Parent=gene-CCO34_RS22875;Dbxref=GenBank:WP_000190678.1;Name=WP_000190678.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=CCO34_RS22875;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190678.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 34325 34909 . + . ID=gene-CCO34_RS22880;Name=CCO34_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22880;old_locus_tag=CCO34_22870 NZ_NPMD01000014.1 Protein Homology CDS 34325 34909 . + 0 ID=cds-WP_001575173.1;Parent=gene-CCO34_RS22880;Dbxref=GenBank:WP_001575173.1;Name=WP_001575173.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=CCO34_RS22880;product=NADPH-dependent FMN reductase;protein_id=WP_001575173.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 34954 36291 . - . ID=gene-CCO34_RS22885;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=CCO34_RS22885;old_locus_tag=CCO34_22875 NZ_NPMD01000014.1 Protein Homology CDS 34954 36291 . - 0 ID=cds-WP_001519317.1;Parent=gene-CCO34_RS22885;Dbxref=GenBank:WP_001519317.1;Name=WP_001519317.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=CCO34_RS22885;product=adenine permease AdeP;protein_id=WP_001519317.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 36460 37125 . + . ID=gene-CCO34_RS22890;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=CCO34_RS22890;old_locus_tag=CCO34_22880 NZ_NPMD01000014.1 Protein Homology CDS 36460 37125 . + 0 ID=cds-WP_000078039.1;Parent=gene-CCO34_RS22890;Dbxref=GenBank:WP_000078039.1;Name=WP_000078039.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=CCO34_RS22890;product=6-phosphogluconate phosphatase;protein_id=WP_000078039.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 37220 37945 . - . ID=gene-CCO34_RS22895;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CCO34_RS22895;old_locus_tag=CCO34_22885 NZ_NPMD01000014.1 Protein Homology CDS 37220 37945 . - 0 ID=cds-WP_000377800.1;Parent=gene-CCO34_RS22895;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=CCO34_RS22895;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 37960 38733 . - . ID=gene-CCO34_RS22900;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CCO34_RS22900;old_locus_tag=CCO34_22890 NZ_NPMD01000014.1 Protein Homology CDS 37960 38733 . - 0 ID=cds-WP_000063118.1;Parent=gene-CCO34_RS22900;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=CCO34_RS22900;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 38820 39710 . - . ID=gene-CCO34_RS22905;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CCO34_RS22905;old_locus_tag=CCO34_22895 NZ_NPMD01000014.1 Protein Homology CDS 38820 39710 . - 0 ID=cds-WP_000212197.1;Parent=gene-CCO34_RS22905;Dbxref=GenBank:WP_000212197.1;Name=WP_000212197.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=CCO34_RS22905;product=phosphate ABC transporter permease PstA;protein_id=WP_000212197.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 39710 40669 . - . ID=gene-CCO34_RS22910;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CCO34_RS22910;old_locus_tag=CCO34_22900 NZ_NPMD01000014.1 Protein Homology CDS 39710 40669 . - 0 ID=cds-WP_000741630.1;Parent=gene-CCO34_RS22910;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=CCO34_RS22910;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 40805 41845 . - . ID=gene-CCO34_RS22915;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=CCO34_RS22915;old_locus_tag=CCO34_22905 NZ_NPMD01000014.1 Protein Homology CDS 40805 41845 . - 0 ID=cds-WP_000867131.1;Parent=gene-CCO34_RS22915;Dbxref=GenBank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=CCO34_RS22915;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 42011 43384 . - . ID=gene-CCO34_RS22920;Name=CCO34_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22920;old_locus_tag=CCO34_22910 NZ_NPMD01000014.1 Protein Homology CDS 42011 43384 . - 0 ID=cds-WP_000162552.1;Parent=gene-CCO34_RS22920;Dbxref=GenBank:WP_000162552.1;Name=WP_000162552.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=CCO34_RS22920;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_000162552.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 43433 44251 . - . ID=gene-CCO34_RS22925;Name=CCO34_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22925;old_locus_tag=CCO34_22915 NZ_NPMD01000014.1 Protein Homology CDS 43433 44251 . - 0 ID=cds-WP_000166709.1;Parent=gene-CCO34_RS22925;Dbxref=GenBank:WP_000166709.1;Name=WP_000166709.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=CCO34_RS22925;product=shikimate 5-dehydrogenase;protein_id=WP_000166709.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 44346 46103 . + . ID=gene-CCO34_RS22930;Name=CCO34_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22930;old_locus_tag=CCO34_22920 NZ_NPMD01000014.1 Protein Homology CDS 44346 46103 . + 0 ID=cds-WP_000213168.1;Parent=gene-CCO34_RS22930;Dbxref=GenBank:WP_000213168.1;Name=WP_000213168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=CCO34_RS22930;product=SgrR family transcriptional regulator;protein_id=WP_000213168.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 46254 48083 . - . ID=gene-CCO34_RS22935;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CCO34_RS22935;old_locus_tag=CCO34_22925 NZ_NPMD01000014.1 Protein Homology CDS 46254 48083 . - 0 ID=cds-WP_000334060.1;Parent=gene-CCO34_RS22935;Dbxref=GenBank:WP_000334060.1;Name=WP_000334060.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=CCO34_RS22935;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334060.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 48272 49642 . - . ID=gene-CCO34_RS22940;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CCO34_RS22940;old_locus_tag=CCO34_22930 NZ_NPMD01000014.1 Protein Homology CDS 48272 49642 . - 0 ID=cds-WP_000934851.1;Parent=gene-CCO34_RS22940;Dbxref=GenBank:WP_000934851.1;Name=WP_000934851.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=CCO34_RS22940;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934851.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 49962 50660 . - . ID=gene-CCO34_RS22950;Name=CCO34_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22950;old_locus_tag=CCO34_22940 NZ_NPMD01000014.1 Protein Homology CDS 49962 50660 . - 0 ID=cds-WP_000009904.1;Parent=gene-CCO34_RS22950;Dbxref=GenBank:WP_000009904.1;Name=WP_000009904.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=CCO34_RS22950;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000009904.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 50890 51309 . - . ID=gene-CCO34_RS22955;Name=CCO34_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS22955;old_locus_tag=CCO34_22945 NZ_NPMD01000014.1 Protein Homology CDS 50890 51309 . - 0 ID=cds-WP_001251971.1;Parent=gene-CCO34_RS22955;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=CCO34_RS22955;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 51330 52712 . - . ID=gene-CCO34_RS22960;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CCO34_RS22960;old_locus_tag=CCO34_22950 NZ_NPMD01000014.1 Protein Homology CDS 51330 52712 . - 0 ID=cds-WP_000190499.1;Parent=gene-CCO34_RS22960;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=CCO34_RS22960;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 52739 53602 . - . ID=gene-CCO34_RS22965;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CCO34_RS22965;old_locus_tag=CCO34_22955 NZ_NPMD01000014.1 Protein Homology CDS 52739 53602 . - 0 ID=cds-WP_000896506.1;Parent=gene-CCO34_RS22965;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=CCO34_RS22965;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 53653 55194 . - . ID=gene-CCO34_RS22970;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CCO34_RS22970;old_locus_tag=CCO34_22960 NZ_NPMD01000014.1 Protein Homology CDS 53653 55194 . - 0 ID=cds-WP_001176751.1;Parent=gene-CCO34_RS22970;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=CCO34_RS22970;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 55207 55740 . - . ID=gene-CCO34_RS22975;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=CCO34_RS22975;old_locus_tag=CCO34_22965 NZ_NPMD01000014.1 Protein Homology CDS 55207 55740 . - 0 ID=cds-WP_001288957.1;Parent=gene-CCO34_RS22975;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=CCO34_RS22975;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 55755 56225 . - . ID=gene-CCO34_RS22980;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=CCO34_RS22980;old_locus_tag=CCO34_22970 NZ_NPMD01000014.1 Protein Homology CDS 55755 56225 . - 0 ID=cds-WP_001052212.1;Parent=gene-CCO34_RS22980;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=CCO34_RS22980;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 56285 56524 . - . ID=gene-CCO34_RS22985;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CCO34_RS22985;old_locus_tag=CCO34_22975 NZ_NPMD01000014.1 Protein Homology CDS 56285 56524 . - 0 ID=cds-WP_000429386.1;Parent=gene-CCO34_RS22985;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=CCO34_RS22985;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 56571 57386 . - . ID=gene-CCO34_RS22990;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CCO34_RS22990;old_locus_tag=CCO34_22980 NZ_NPMD01000014.1 Protein Homology CDS 56571 57386 . - 0 ID=cds-WP_000135632.1;Parent=gene-CCO34_RS22990;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=CCO34_RS22990;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 57395 57775 . - . ID=gene-CCO34_RS22995;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=CCO34_RS22995;old_locus_tag=CCO34_22985 NZ_NPMD01000014.1 Protein Homology CDS 57395 57775 . - 0 ID=cds-WP_000116685.1;Parent=gene-CCO34_RS22995;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=CCO34_RS22995;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 58391 59014 . - . ID=gene-CCO34_RS23000;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CCO34_RS23000;old_locus_tag=CCO34_22990 NZ_NPMD01000014.1 Protein Homology CDS 58391 59014 . - 0 ID=cds-WP_001535796.1;Parent=gene-CCO34_RS23000;Dbxref=GenBank:WP_001535796.1;Name=WP_001535796.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=CCO34_RS23000;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001535796.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 59117 61006 . - . ID=gene-CCO34_RS23005;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CCO34_RS23005;old_locus_tag=CCO34_22995 NZ_NPMD01000014.1 Protein Homology CDS 59117 61006 . - 0 ID=cds-WP_000499872.1;Parent=gene-CCO34_RS23005;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=CCO34_RS23005;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 61385 61828 . - . ID=gene-CCO34_RS23015;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=CCO34_RS23015;old_locus_tag=CCO34_23005 NZ_NPMD01000014.1 Protein Homology CDS 61385 61828 . - 0 ID=cds-WP_000763722.1;Parent=gene-CCO34_RS23015;Dbxref=GenBank:WP_000763722.1;Name=WP_000763722.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=CCO34_RS23015;product=FMN-binding protein MioC;protein_id=WP_000763722.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 61918 62376 . - . ID=gene-CCO34_RS23020;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=CCO34_RS23020;old_locus_tag=CCO34_23010 NZ_NPMD01000014.1 Protein Homology CDS 61918 62376 . - 0 ID=cds-WP_000433018.1;Parent=gene-CCO34_RS23020;Dbxref=GenBank:WP_000433018.1;Name=WP_000433018.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=CCO34_RS23020;product=transcriptional regulator AsnC;protein_id=WP_000433018.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 62527 63519 . + . ID=gene-CCO34_RS23025;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=CCO34_RS23025;old_locus_tag=CCO34_23015 NZ_NPMD01000014.1 Protein Homology CDS 62527 63519 . + 0 ID=cds-WP_000845123.1;Parent=gene-CCO34_RS23025;Dbxref=GenBank:WP_000845123.1;Name=WP_000845123.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=CCO34_RS23025;product=aspartate--ammonia ligase;protein_id=WP_000845123.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 63524 64975 . - . ID=gene-CCO34_RS23030;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=CCO34_RS23030;old_locus_tag=CCO34_23020 NZ_NPMD01000014.1 Protein Homology CDS 63524 64975 . - 0 ID=cds-WP_000956592.1;Parent=gene-CCO34_RS23030;Dbxref=GenBank:WP_000956592.1;Name=WP_000956592.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=CCO34_RS23030;product=ATPase RavA stimulator ViaA;protein_id=WP_000956592.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 64969 66465 . - . ID=gene-CCO34_RS23035;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=CCO34_RS23035;old_locus_tag=CCO34_23025 NZ_NPMD01000014.1 Protein Homology CDS 64969 66465 . - 0 ID=cds-WP_000940987.1;Parent=gene-CCO34_RS23035;Dbxref=GenBank:WP_000940987.1;Name=WP_000940987.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=CCO34_RS23035;product=ATPase RavA;protein_id=WP_000940987.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 66813 68681 . + . ID=gene-CCO34_RS23040;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=CCO34_RS23040;old_locus_tag=CCO34_23030 NZ_NPMD01000014.1 Protein Homology CDS 66813 68681 . + 0 ID=cds-WP_000102338.1;Parent=gene-CCO34_RS23040;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=CCO34_RS23040;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 68898 69317 . + . ID=gene-CCO34_RS23045;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CCO34_RS23045;old_locus_tag=CCO34_23035 NZ_NPMD01000014.1 Protein Homology CDS 68898 69317 . + 0 ID=cds-WP_000715944.1;Parent=gene-CCO34_RS23045;Dbxref=GenBank:WP_000715944.1;Name=WP_000715944.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=CCO34_RS23045;product=D-ribose pyranase;protein_id=WP_000715944.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 69325 70830 . + . ID=gene-CCO34_RS23050;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=CCO34_RS23050;old_locus_tag=CCO34_23040 NZ_NPMD01000014.1 Protein Homology CDS 69325 70830 . + 0 ID=cds-WP_000339359.1;Parent=gene-CCO34_RS23050;Dbxref=GenBank:WP_000339359.1;Name=WP_000339359.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=CCO34_RS23050;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339359.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 70836 71801 . + . ID=gene-CCO34_RS23055;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=CCO34_RS23055;old_locus_tag=CCO34_23045 NZ_NPMD01000014.1 Protein Homology CDS 70836 71801 . + 0 ID=cds-WP_000211345.1;Parent=gene-CCO34_RS23055;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=CCO34_RS23055;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 71826 72716 . + . ID=gene-CCO34_RS23060;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=CCO34_RS23060;old_locus_tag=CCO34_23050 NZ_NPMD01000014.1 Protein Homology CDS 71826 72716 . + 0 ID=cds-WP_001056260.1;Parent=gene-CCO34_RS23060;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=CCO34_RS23060;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 72849 73778 . + . ID=gene-CCO34_RS23065;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO34_RS23065;old_locus_tag=CCO34_23055 NZ_NPMD01000014.1 Protein Homology CDS 72849 73778 . + 0 ID=cds-WP_000844728.1;Parent=gene-CCO34_RS23065;Dbxref=GenBank:WP_000844728.1;Name=WP_000844728.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=CCO34_RS23065;product=ribokinase;protein_id=WP_000844728.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 73782 74780 . + . ID=gene-CCO34_RS23070;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=CCO34_RS23070;old_locus_tag=CCO34_23060 NZ_NPMD01000014.1 Protein Homology CDS 73782 74780 . + 0 ID=cds-WP_000224491.1;Parent=gene-CCO34_RS23070;Dbxref=GenBank:WP_000224491.1;Name=WP_000224491.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=CCO34_RS23070;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224491.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 74746 76173 . - . ID=gene-CCO34_RS23075;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=CCO34_RS23075;old_locus_tag=CCO34_23065 NZ_NPMD01000014.1 Protein Homology CDS 74746 76173 . - 0 ID=cds-WP_000202071.1;Parent=gene-CCO34_RS23075;Dbxref=GenBank:WP_000202071.1;Name=WP_000202071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=CCO34_RS23075;product=multidrug transporter subunit MdtD;protein_id=WP_000202071.1;transl_table=11 NZ_NPMD01000014.1 RefSeq gene 76185 76889 . - . ID=gene-CCO34_RS23080;Name=CCO34_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23080;old_locus_tag=CCO34_23070 NZ_NPMD01000014.1 Protein Homology CDS 76185 76889 . - 0 ID=cds-WP_001131144.1;Parent=gene-CCO34_RS23080;Dbxref=GenBank:WP_001131144.1;Name=WP_001131144.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=CCO34_RS23080;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131144.1;transl_table=11 ##sequence-region NZ_NPMD01000015.1 1 55710 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000015.1 RefSeq region 1 55710 . + . ID=NZ_NPMD01000015.1:1..55710;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000015.1 RefSeq pseudogene 1 289 . - . ID=gene-CCO34_RS23085;Name=CCO34_RS23085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS23085;old_locus_tag=CCO34_23075;partial=true;pseudo=true;start_range=.,1 NZ_NPMD01000015.1 Protein Homology CDS 1 289 . - 0 ID=cds-CCO34_RS23085;Parent=gene-CCO34_RS23085;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=CCO34_RS23085;partial=true;product=flagellin FliC;pseudo=true;start_range=.,1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 653 1225 . - . ID=gene-CCO34_RS23090;Name=hin;gbkey=Gene;gene=hin;gene_biotype=protein_coding;locus_tag=CCO34_RS23090;old_locus_tag=CCO34_23080 NZ_NPMD01000015.1 Protein Homology CDS 653 1225 . - 0 ID=cds-WP_000190914.1;Parent=gene-CCO34_RS23090;Dbxref=GenBank:WP_000190914.1;Name=WP_000190914.1;gbkey=CDS;gene=hin;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461699.1;locus_tag=CCO34_RS23090;product=flagellar phase variation DNA invertase Hin;protein_id=WP_000190914.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 1916 3031 . + . ID=gene-CCO34_RS23100;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=CCO34_RS23100;old_locus_tag=CCO34_23090 NZ_NPMD01000015.1 Protein Homology CDS 1916 3031 . + 0 ID=cds-WP_001221110.1;Parent=gene-CCO34_RS23100;Dbxref=GenBank:WP_001221110.1;Name=WP_001221110.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=CCO34_RS23100;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_001221110.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 3112 6768 . + . ID=gene-CCO34_RS23105;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=CCO34_RS23105;old_locus_tag=CCO34_23095 NZ_NPMD01000015.1 Protein Homology CDS 3112 6768 . + 0 ID=cds-WP_001111830.1;Parent=gene-CCO34_RS23105;Dbxref=GenBank:WP_001111830.1;Name=WP_001111830.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=CCO34_RS23105;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_001111830.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 6878 8122 . + . ID=gene-CCO34_RS23110;Name=CCO34_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23110;old_locus_tag=CCO34_23100 NZ_NPMD01000015.1 Protein Homology CDS 6878 8122 . + 0 ID=cds-WP_001239925.1;Parent=gene-CCO34_RS23110;Dbxref=GenBank:WP_001239925.1;Name=WP_001239925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=CCO34_RS23110;product=esterase family protein;protein_id=WP_001239925.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 8154 9089 . + . ID=gene-CCO34_RS23115;Name=CCO34_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23115;old_locus_tag=CCO34_23105 NZ_NPMD01000015.1 Protein Homology CDS 8154 9089 . + 0 ID=cds-WP_080181065.1;Parent=gene-CCO34_RS23115;Dbxref=GenBank:WP_080181065.1;Name=WP_080181065.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=CCO34_RS23115;product=alpha/beta hydrolase;protein_id=WP_080181065.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 9131 11305 . - . ID=gene-CCO34_RS23120;Name=CCO34_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23120;old_locus_tag=CCO34_23110 NZ_NPMD01000015.1 Protein Homology CDS 9131 11305 . - 0 ID=cds-WP_272897163.1;Parent=gene-CCO34_RS23120;Dbxref=GenBank:WP_272897163.1;Name=WP_272897163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=CCO34_RS23120;product=TonB-dependent siderophore receptor;protein_id=WP_272897163.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 11837 12169 . - . ID=gene-CCO34_RS23125;Name=CCO34_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23125;old_locus_tag=CCO34_23115 NZ_NPMD01000015.1 Protein Homology CDS 11837 12169 . - 0 ID=cds-WP_077463764.1;Parent=gene-CCO34_RS23125;Dbxref=GenBank:WP_077463764.1;Name=WP_077463764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=CCO34_RS23125;product=hypothetical protein;protein_id=WP_077463764.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 12344 13396 . - . ID=gene-CCO34_RS23130;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=CCO34_RS23130;old_locus_tag=CCO34_23120 NZ_NPMD01000015.1 Protein Homology CDS 12344 13396 . - 0 ID=cds-WP_001667622.1;Parent=gene-CCO34_RS23130;Dbxref=GenBank:WP_001667622.1;Name=WP_001667622.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=CCO34_RS23130;product=SPI-2 type III secretion system effector PipB2;protein_id=WP_001667622.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 13915 14844 . + . ID=gene-CCO34_RS23140;Name=CCO34_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23140;old_locus_tag=CCO34_23130 NZ_NPMD01000015.1 Protein Homology CDS 13915 14844 . + 0 ID=cds-WP_001749420.1;Parent=gene-CCO34_RS23140;Dbxref=GenBank:WP_001749420.1;Name=WP_001749420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=CCO34_RS23140;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_001749420.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 15138 16034 . + . ID=gene-CCO34_RS23150;Name=CCO34_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23150;old_locus_tag=CCO34_23140 NZ_NPMD01000015.1 Protein Homology CDS 15138 16034 . + 0 ID=cds-WP_064047140.1;Parent=gene-CCO34_RS23150;Dbxref=GenBank:WP_064047140.1;Name=WP_064047140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=CCO34_RS23150;product=antimicrobial resistance protein Mig-14;protein_id=WP_064047140.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 16756 17769 . - . ID=gene-CCO34_RS23155;Name=CCO34_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23155;old_locus_tag=CCO34_23145 NZ_NPMD01000015.1 Protein Homology CDS 16756 17769 . - 0 ID=cds-WP_001059351.1;Parent=gene-CCO34_RS23155;Dbxref=GenBank:WP_001059351.1;Name=WP_001059351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=CCO34_RS23155;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_001059351.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 17902 19317 . - . ID=gene-CCO34_RS23160;Name=CCO34_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23160;old_locus_tag=CCO34_23150 NZ_NPMD01000015.1 Protein Homology CDS 17902 19317 . - 0 ID=cds-WP_024797805.1;Parent=gene-CCO34_RS23160;Dbxref=GenBank:WP_024797805.1;Name=WP_024797805.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=CCO34_RS23160;product=sensor histidine kinase;protein_id=WP_024797805.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 19304 19978 . - . ID=gene-CCO34_RS23165;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=CCO34_RS23165;old_locus_tag=CCO34_23155 NZ_NPMD01000015.1 Protein Homology CDS 19304 19978 . - 0 ID=cds-WP_001237934.1;Parent=gene-CCO34_RS23165;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=CCO34_RS23165;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 20133 21110 . + . ID=gene-CCO34_RS23170;Name=CCO34_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23170;old_locus_tag=CCO34_23160 NZ_NPMD01000015.1 Protein Homology CDS 20133 21110 . + 0 ID=cds-WP_000744416.1;Parent=gene-CCO34_RS23170;Dbxref=GenBank:WP_000744416.1;Name=WP_000744416.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=CCO34_RS23170;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744416.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 21122 21556 . + . ID=gene-CCO34_RS23175;Name=CCO34_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23175;old_locus_tag=CCO34_23165 NZ_NPMD01000015.1 Protein Homology CDS 21122 21556 . + 0 ID=cds-WP_001574835.1;Parent=gene-CCO34_RS23175;Dbxref=GenBank:WP_001574835.1;Name=WP_001574835.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=CCO34_RS23175;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 21567 23081 . + . ID=gene-CCO34_RS23180;Name=CCO34_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23180;old_locus_tag=CCO34_23170 NZ_NPMD01000015.1 Protein Homology CDS 21567 23081 . + 0 ID=cds-WP_000382035.1;Parent=gene-CCO34_RS23180;Dbxref=GenBank:WP_000382035.1;Name=WP_000382035.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=CCO34_RS23180;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382035.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 23385 24362 . + . ID=gene-CCO34_RS23185;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=CCO34_RS23185;old_locus_tag=CCO34_23175 NZ_NPMD01000015.1 Protein Homology CDS 23385 24362 . + 0 ID=cds-WP_000993100.1;Parent=gene-CCO34_RS23185;Dbxref=GenBank:WP_000993100.1;Name=WP_000993100.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=CCO34_RS23185;product=glutarate dioxygenase GlaH;protein_id=WP_000993100.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 24388 25656 . + . ID=gene-CCO34_RS23190;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=CCO34_RS23190;old_locus_tag=CCO34_23180 NZ_NPMD01000015.1 Protein Homology CDS 24388 25656 . + 0 ID=cds-WP_000271912.1;Parent=gene-CCO34_RS23190;Dbxref=GenBank:WP_000271912.1;Name=WP_000271912.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=CCO34_RS23190;product=L-2-hydroxyglutarate oxidase;protein_id=WP_000271912.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 25678 27126 . + . ID=gene-CCO34_RS23195;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=CCO34_RS23195;old_locus_tag=CCO34_23185 NZ_NPMD01000015.1 Protein Homology CDS 25678 27126 . + 0 ID=cds-WP_001176523.1;Parent=gene-CCO34_RS23195;Dbxref=GenBank:WP_001176523.1;Name=WP_001176523.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=CCO34_RS23195;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_001176523.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 27141 28424 . + . ID=gene-CCO34_RS23200;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=CCO34_RS23200;old_locus_tag=CCO34_23190 NZ_NPMD01000015.1 Protein Homology CDS 27141 28424 . + 0 ID=cds-WP_080181046.1;Parent=gene-CCO34_RS23200;Dbxref=GenBank:WP_080181046.1;Name=WP_080181046.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=CCO34_RS23200;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_080181046.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 28554 29954 . + . ID=gene-CCO34_RS23205;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=CCO34_RS23205;old_locus_tag=CCO34_23195 NZ_NPMD01000015.1 Protein Homology CDS 28554 29954 . + 0 ID=cds-WP_000531282.1;Parent=gene-CCO34_RS23205;Dbxref=GenBank:WP_000531282.1;Name=WP_000531282.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=CCO34_RS23205;product=GABA permease;protein_id=WP_000531282.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 29996 30673 . + . ID=gene-CCO34_RS23210;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=CCO34_RS23210;old_locus_tag=CCO34_23200 NZ_NPMD01000015.1 Protein Homology CDS 29996 30673 . + 0 ID=cds-WP_000126152.1;Parent=gene-CCO34_RS23210;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=CCO34_RS23210;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 30695 31144 . - . ID=gene-CCO34_RS23215;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=CCO34_RS23215;old_locus_tag=CCO34_23205 NZ_NPMD01000015.1 Protein Homology CDS 30695 31144 . - 0 ID=cds-WP_000522406.1;Parent=gene-CCO34_RS23215;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=CCO34_RS23215;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 31244 31402 . - . ID=gene-CCO34_RS23225;Name=CCO34_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23225;old_locus_tag=CCO34_23210 NZ_NPMD01000015.1 Protein Homology CDS 31244 31402 . - 0 ID=cds-WP_000508175.1;Parent=gene-CCO34_RS23225;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=CCO34_RS23225;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 31585 31884 . + . ID=gene-CCO34_RS23230;Name=CCO34_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23230;old_locus_tag=CCO34_23215 NZ_NPMD01000015.1 Protein Homology CDS 31585 31884 . + 0 ID=cds-WP_000137432.1;Parent=gene-CCO34_RS23230;Dbxref=GenBank:WP_000137432.1;Name=WP_000137432.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=CCO34_RS23230;product=ArsR/SmtB family transcription factor;protein_id=WP_000137432.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 31894 32421 . + . ID=gene-CCO34_RS23235;Name=CCO34_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23235;old_locus_tag=CCO34_23220 NZ_NPMD01000015.1 Protein Homology CDS 31894 32421 . + 0 ID=cds-WP_000022011.1;Parent=gene-CCO34_RS23235;Dbxref=GenBank:WP_000022011.1;Name=WP_000022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=CCO34_RS23235;product=rhodanese family protein;protein_id=WP_000022011.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 32500 32679 . + . ID=gene-CCO34_RS23240;Name=CCO34_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23240;old_locus_tag=CCO34_23225 NZ_NPMD01000015.1 Protein Homology CDS 32500 32679 . + 0 ID=cds-WP_000494940.1;Parent=gene-CCO34_RS23240;Dbxref=GenBank:WP_000494940.1;Name=WP_000494940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=CCO34_RS23240;product=hypothetical protein;protein_id=WP_000494940.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 32769 33170 . - . ID=gene-CCO34_RS23245;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=CCO34_RS23245;old_locus_tag=CCO34_23230 NZ_NPMD01000015.1 Protein Homology CDS 32769 33170 . - 0 ID=cds-WP_001051100.1;Parent=gene-CCO34_RS23245;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=CCO34_RS23245;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 33868 34317 . + . ID=gene-CCO34_RS23255;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=CCO34_RS23255;old_locus_tag=CCO34_23240 NZ_NPMD01000015.1 Protein Homology CDS 33868 34317 . + 0 ID=cds-WP_000492669.1;Parent=gene-CCO34_RS23255;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=CCO34_RS23255;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 34352 34702 . - . ID=gene-CCO34_RS23260;Name=CCO34_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23260;old_locus_tag=CCO34_23245 NZ_NPMD01000015.1 Protein Homology CDS 34352 34702 . - 0 ID=cds-WP_000281304.1;Parent=gene-CCO34_RS23260;Dbxref=GenBank:WP_000281304.1;Name=WP_000281304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=CCO34_RS23260;product=DUF2002 family protein;protein_id=WP_000281304.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 34864 35190 . + . ID=gene-CCO34_RS23265;Name=CCO34_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23265;old_locus_tag=CCO34_23250 NZ_NPMD01000015.1 Protein Homology CDS 34864 35190 . + 0 ID=cds-WP_001519557.1;Parent=gene-CCO34_RS23265;Dbxref=GenBank:WP_001519557.1;Name=WP_001519557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=CCO34_RS23265;product=DUF883 domain-containing protein;protein_id=WP_001519557.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 35274 36608 . - . ID=gene-CCO34_RS23270;Name=CCO34_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23270;old_locus_tag=CCO34_23255 NZ_NPMD01000015.1 Protein Homology CDS 35274 36608 . - 0 ID=cds-WP_001138468.1;Parent=gene-CCO34_RS23270;Dbxref=GenBank:WP_001138468.1;Name=WP_001138468.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=CCO34_RS23270;product=PLP-dependent aminotransferase family protein;protein_id=WP_001138468.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 36697 37128 . + . ID=gene-CCO34_RS23275;Name=CCO34_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23275;old_locus_tag=CCO34_23260 NZ_NPMD01000015.1 Protein Homology CDS 36697 37128 . + 0 ID=cds-WP_000209819.1;Parent=gene-CCO34_RS23275;Dbxref=GenBank:WP_000209819.1;Name=WP_000209819.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=CCO34_RS23275;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209819.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 37400 37645 . + . ID=gene-CCO34_RS23285;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=CCO34_RS23285;old_locus_tag=CCO34_23270 NZ_NPMD01000015.1 Protein Homology CDS 37400 37645 . + 0 ID=cds-WP_000028870.1;Parent=gene-CCO34_RS23285;Dbxref=GenBank:WP_000028870.1;Name=WP_000028870.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=CCO34_RS23285;product=glutaredoxin-like protein NrdH;protein_id=WP_000028870.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 37642 38052 . + . ID=gene-CCO34_RS23290;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CCO34_RS23290;old_locus_tag=CCO34_23275 NZ_NPMD01000015.1 Protein Homology CDS 37642 38052 . + 0 ID=cds-WP_001275409.1;Parent=gene-CCO34_RS23290;Dbxref=GenBank:WP_001275409.1;Name=WP_001275409.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=CCO34_RS23290;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275409.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 38025 40169 . + . ID=gene-CCO34_RS23295;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CCO34_RS23295;old_locus_tag=CCO34_23280 NZ_NPMD01000015.1 Protein Homology CDS 38025 40169 . + 0 ID=cds-WP_000246617.1;Parent=gene-CCO34_RS23295;Dbxref=GenBank:WP_000246617.1;Name=WP_000246617.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=CCO34_RS23295;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000246617.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 40180 41139 . + . ID=gene-CCO34_RS23300;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CCO34_RS23300;old_locus_tag=CCO34_23285 NZ_NPMD01000015.1 Protein Homology CDS 40180 41139 . + 0 ID=cds-WP_000777906.1;Parent=gene-CCO34_RS23300;Dbxref=GenBank:WP_000777906.1;Name=WP_000777906.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=CCO34_RS23300;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777906.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 41494 42696 . + . ID=gene-CCO34_RS23310;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=CCO34_RS23310;old_locus_tag=CCO34_23295 NZ_NPMD01000015.1 Protein Homology CDS 41494 42696 . + 0 ID=cds-WP_000985529.1;Parent=gene-CCO34_RS23310;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=CCO34_RS23310;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 42689 43753 . + . ID=gene-CCO34_RS23315;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=CCO34_RS23315;old_locus_tag=CCO34_23300 NZ_NPMD01000015.1 Protein Homology CDS 42689 43753 . + 0 ID=cds-WP_000775022.1;Parent=gene-CCO34_RS23315;Dbxref=GenBank:WP_000775022.1;Name=WP_000775022.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=CCO34_RS23315;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775022.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 43823 44818 . + . ID=gene-CCO34_RS23320;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=CCO34_RS23320;old_locus_tag=CCO34_23305 NZ_NPMD01000015.1 Protein Homology CDS 43823 44818 . + 0 ID=cds-WP_001216622.1;Parent=gene-CCO34_RS23320;Dbxref=GenBank:WP_001216622.1;Name=WP_001216622.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=CCO34_RS23320;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216622.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 44983 46167 . + . ID=gene-CCO34_RS23325;Name=CCO34_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23325;old_locus_tag=CCO34_23310 NZ_NPMD01000015.1 Protein Homology CDS 44983 46167 . + 0 ID=cds-WP_000165769.1;Parent=gene-CCO34_RS23325;Dbxref=GenBank:WP_000165769.1;Name=WP_000165769.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=CCO34_RS23325;product=MFS transporter;protein_id=WP_000165769.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 46664 47194 . + . ID=gene-CCO34_RS23330;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=CCO34_RS23330;old_locus_tag=CCO34_23315 NZ_NPMD01000015.1 Protein Homology CDS 46664 47194 . + 0 ID=cds-WP_000378431.1;Parent=gene-CCO34_RS23330;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=CCO34_RS23330;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 47321 48493 . + . ID=gene-CCO34_RS23335;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=CCO34_RS23335;old_locus_tag=CCO34_23320 NZ_NPMD01000015.1 Protein Homology CDS 47321 48493 . + 0 ID=cds-WP_001275606.1;Parent=gene-CCO34_RS23335;Dbxref=GenBank:WP_001275606.1;Name=WP_001275606.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=CCO34_RS23335;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275606.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 48510 50048 . + . ID=gene-CCO34_RS23340;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=CCO34_RS23340;old_locus_tag=CCO34_23325 NZ_NPMD01000015.1 Protein Homology CDS 48510 50048 . + 0 ID=cds-WP_001187297.1;Parent=gene-CCO34_RS23340;Dbxref=GenBank:WP_001187297.1;Name=WP_001187297.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=CCO34_RS23340;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187297.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 50097 51467 . - . ID=gene-CCO34_RS23345;Name=CCO34_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23345;old_locus_tag=CCO34_23330 NZ_NPMD01000015.1 Protein Homology CDS 50097 51467 . - 0 ID=cds-WP_023228855.1;Parent=gene-CCO34_RS23345;Dbxref=GenBank:WP_023228855.1;Name=WP_023228855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=CCO34_RS23345;product=carbohydrate porin;protein_id=WP_023228855.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 51813 52328 . - . ID=gene-CCO34_RS23350;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=CCO34_RS23350;old_locus_tag=CCO34_23335 NZ_NPMD01000015.1 Protein Homology CDS 51813 52328 . - 0 ID=cds-WP_001130193.1;Parent=gene-CCO34_RS23350;Dbxref=GenBank:WP_001130193.1;Name=WP_001130193.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=CCO34_RS23350;product=S-ribosylhomocysteine lyase;protein_id=WP_001130193.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 52478 54034 . - . ID=gene-CCO34_RS23355;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=CCO34_RS23355;old_locus_tag=CCO34_23340 NZ_NPMD01000015.1 Protein Homology CDS 52478 54034 . - 0 ID=cds-WP_000611821.1;Parent=gene-CCO34_RS23355;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=CCO34_RS23355;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 54111 54536 . - . ID=gene-CCO34_RS23360;Name=CCO34_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23360;old_locus_tag=CCO34_23345 NZ_NPMD01000015.1 Protein Homology CDS 54111 54536 . - 0 ID=cds-WP_001279499.1;Parent=gene-CCO34_RS23360;Dbxref=GenBank:WP_001279499.1;Name=WP_001279499.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=CCO34_RS23360;product=YqaA family protein;protein_id=WP_001279499.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 54533 55099 . - . ID=gene-CCO34_RS23365;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=CCO34_RS23365;old_locus_tag=CCO34_23350 NZ_NPMD01000015.1 Protein Homology CDS 54533 55099 . - 0 ID=cds-WP_000271291.1;Parent=gene-CCO34_RS23365;Dbxref=GenBank:WP_000271291.1;Name=WP_000271291.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=CCO34_RS23365;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271291.1;transl_table=11 NZ_NPMD01000015.1 RefSeq gene 55329 55405 . - . ID=gene-CCO34_RS23370;Name=CCO34_RS23370;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS23370;old_locus_tag=CCO34_23355 NZ_NPMD01000015.1 tRNAscan-SE tRNA 55329 55405 . - . ID=rna-CCO34_RS23370;Parent=gene-CCO34_RS23370;anticodon=(pos:complement(55369..55371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS23370;product=tRNA-Arg NZ_NPMD01000015.1 tRNAscan-SE exon 55329 55405 . - . ID=exon-CCO34_RS23370-1;Parent=rna-CCO34_RS23370;anticodon=(pos:complement(55369..55371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS23370;product=tRNA-Arg NZ_NPMD01000015.1 RefSeq gene 55602 55678 . - . ID=gene-CCO34_RS23375;Name=CCO34_RS23375;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS23375;old_locus_tag=CCO34_23360 NZ_NPMD01000015.1 tRNAscan-SE tRNA 55602 55678 . - . ID=rna-CCO34_RS23375;Parent=gene-CCO34_RS23375;anticodon=(pos:complement(55642..55644));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS23375;product=tRNA-Arg NZ_NPMD01000015.1 tRNAscan-SE exon 55602 55678 . - . ID=exon-CCO34_RS23375-1;Parent=rna-CCO34_RS23375;anticodon=(pos:complement(55642..55644));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS23375;product=tRNA-Arg ##sequence-region NZ_NPMD01000016.1 1 49217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000016.1 RefSeq region 1 49217 . + . ID=NZ_NPMD01000016.1:1..49217;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000016.1 RefSeq gene 1 160 . - . ID=gene-CCO34_RS23380;Name=CCO34_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23380;old_locus_tag=CCO34_23365;partial=true;start_range=.,1 NZ_NPMD01000016.1 Protein Homology CDS 1 160 . - 0 ID=cds-WP_130587684.1;Parent=gene-CCO34_RS23380;Dbxref=GenBank:WP_130587684.1;Name=WP_130587684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO34_RS23380;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_130587684.1;start_range=.,1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 250 2802 . - . ID=gene-CCO34_RS23385;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=CCO34_RS23385;old_locus_tag=CCO34_23370 NZ_NPMD01000016.1 Protein Homology CDS 250 2802 . - 0 ID=cds-WP_000673820.1;Parent=gene-CCO34_RS23385;Dbxref=GenBank:WP_000673820.1;Name=WP_000673820.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=CCO34_RS23385;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_000673820.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 2923 3702 . + . ID=gene-CCO34_RS23390;Name=CCO34_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23390;old_locus_tag=CCO34_23375 NZ_NPMD01000016.1 Protein Homology CDS 2923 3702 . + 0 ID=cds-WP_000874739.1;Parent=gene-CCO34_RS23390;Dbxref=GenBank:WP_000874739.1;Name=WP_000874739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=CCO34_RS23390;product=hypothetical protein;protein_id=WP_000874739.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 3702 4241 . + . ID=gene-CCO34_RS23395;Name=CCO34_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23395;old_locus_tag=CCO34_23380 NZ_NPMD01000016.1 Protein Homology CDS 3702 4241 . + 0 ID=cds-WP_000951390.1;Parent=gene-CCO34_RS23395;Dbxref=GenBank:WP_000951390.1;Name=WP_000951390.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=CCO34_RS23395;product=PilN domain-containing protein;protein_id=WP_000951390.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 4225 4698 . + . ID=gene-CCO34_RS23400;Name=CCO34_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23400;old_locus_tag=CCO34_23385 NZ_NPMD01000016.1 Protein Homology CDS 4225 4698 . + 0 ID=cds-WP_000992487.1;Parent=gene-CCO34_RS23400;Dbxref=GenBank:WP_000992487.1;Name=WP_000992487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=CCO34_RS23400;product=hypothetical protein;protein_id=WP_000992487.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 4688 5089 . + . ID=gene-CCO34_RS23405;Name=CCO34_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23405;old_locus_tag=CCO34_23390 NZ_NPMD01000016.1 Protein Homology CDS 4688 5089 . + 0 ID=cds-WP_000648115.1;Parent=gene-CCO34_RS23405;Dbxref=GenBank:WP_000648115.1;Name=WP_000648115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=CCO34_RS23405;product=HofP DNA utilization family protein;protein_id=WP_000648115.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 5004 6242 . + . ID=gene-CCO34_RS23410;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=CCO34_RS23410;old_locus_tag=CCO34_23395 NZ_NPMD01000016.1 Protein Homology CDS 5004 6242 . + 0 ID=cds-WP_000832815.1;Parent=gene-CCO34_RS23410;Dbxref=GenBank:WP_000832815.1;Name=WP_000832815.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=CCO34_RS23410;product=DNA uptake porin HofQ;protein_id=WP_000832815.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 6707 7228 . + . ID=gene-CCO34_RS23420;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=CCO34_RS23420;old_locus_tag=CCO34_23405 NZ_NPMD01000016.1 Protein Homology CDS 6707 7228 . + 0 ID=cds-WP_000818621.1;Parent=gene-CCO34_RS23420;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=CCO34_RS23420;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 7285 8373 . + . ID=gene-CCO34_RS23425;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CCO34_RS23425;old_locus_tag=CCO34_23410 NZ_NPMD01000016.1 Protein Homology CDS 7285 8373 . + 0 ID=cds-WP_000439822.1;Parent=gene-CCO34_RS23425;Dbxref=GenBank:WP_000439822.1;Name=WP_000439822.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=CCO34_RS23425;product=3-dehydroquinate synthase;protein_id=WP_000439822.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 8471 9748 . + . ID=gene-CCO34_RS23430;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=CCO34_RS23430;old_locus_tag=CCO34_23415 NZ_NPMD01000016.1 Protein Homology CDS 8471 9748 . + 0 ID=cds-WP_000343155.1;Parent=gene-CCO34_RS23430;Dbxref=GenBank:WP_000343155.1;Name=WP_000343155.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=CCO34_RS23430;product=cell division protein DamX;protein_id=WP_000343155.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 9929 10765 . + . ID=gene-CCO34_RS23435;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=CCO34_RS23435;old_locus_tag=CCO34_23420 NZ_NPMD01000016.1 Protein Homology CDS 9929 10765 . + 0 ID=cds-WP_000742132.1;Parent=gene-CCO34_RS23435;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=CCO34_RS23435;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 10783 11460 . + . ID=gene-CCO34_RS23440;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CCO34_RS23440;old_locus_tag=CCO34_23425 NZ_NPMD01000016.1 Protein Homology CDS 10783 11460 . + 0 ID=cds-WP_023228923.1;Parent=gene-CCO34_RS23440;Dbxref=GenBank:WP_023228923.1;Name=WP_023228923.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312255.1;locus_tag=CCO34_RS23440;product=ribulose-phosphate 3-epimerase;protein_id=WP_023228923.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 11453 12211 . + . ID=gene-CCO34_RS23445;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=CCO34_RS23445;old_locus_tag=CCO34_23430 NZ_NPMD01000016.1 Protein Homology CDS 11453 12211 . + 0 ID=cds-WP_001038038.1;Parent=gene-CCO34_RS23445;Dbxref=GenBank:WP_001038038.1;Name=WP_001038038.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=CCO34_RS23445;product=phosphoglycolate phosphatase;protein_id=WP_001038038.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 12204 13208 . + . ID=gene-CCO34_RS23450;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO34_RS23450;old_locus_tag=CCO34_23435 NZ_NPMD01000016.1 Protein Homology CDS 12204 13208 . + 0 ID=cds-WP_000165562.1;Parent=gene-CCO34_RS23450;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=CCO34_RS23450;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 13353 13523 . - . ID=gene-CCO34_RS23455;Name=CCO34_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23455;old_locus_tag=CCO34_23440 NZ_NPMD01000016.1 Protein Homology CDS 13353 13523 . - 0 ID=cds-WP_000472323.1;Parent=gene-CCO34_RS23455;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=CCO34_RS23455;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 13716 19373 . - . ID=gene-CCO34_RS23460;Name=CCO34_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23460;old_locus_tag=CCO34_23445 NZ_NPMD01000016.1 Protein Homology CDS 13716 19373 . - 0 ID=cds-WP_094965638.1;Parent=gene-CCO34_RS23460;Dbxref=GenBank:WP_094965638.1;Name=WP_094965638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663097.1;locus_tag=CCO34_RS23460;product=autotransporter domain-containing protein;protein_id=WP_094965638.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 19702 21075 . - . ID=gene-CCO34_RS23465;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=CCO34_RS23465;old_locus_tag=CCO34_23450 NZ_NPMD01000016.1 Protein Homology CDS 19702 21075 . - 0 ID=cds-WP_023243451.1;Parent=gene-CCO34_RS23465;Dbxref=GenBank:WP_023243451.1;Name=WP_023243451.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=CCO34_RS23465;product=siroheme synthase CysG;protein_id=WP_023243451.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 21087 21896 . - . ID=gene-CCO34_RS23470;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=CCO34_RS23470;old_locus_tag=CCO34_23455 NZ_NPMD01000016.1 Protein Homology CDS 21087 21896 . - 0 ID=cds-WP_000493576.1;Parent=gene-CCO34_RS23470;Dbxref=GenBank:WP_000493576.1;Name=WP_000493576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=CCO34_RS23470;product=nitrite transporter NirC;protein_id=WP_000493576.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 22161 22487 . - . ID=gene-CCO34_RS23475;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CCO34_RS23475;old_locus_tag=CCO34_23460 NZ_NPMD01000016.1 Protein Homology CDS 22161 22487 . - 0 ID=cds-WP_000084813.1;Parent=gene-CCO34_RS23475;Dbxref=GenBank:WP_000084813.1;Name=WP_000084813.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=CCO34_RS23475;product=nitrite reductase small subunit NirD;protein_id=WP_000084813.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 22484 25027 . - . ID=gene-CCO34_RS23480;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CCO34_RS23480;old_locus_tag=CCO34_23465 NZ_NPMD01000016.1 Protein Homology CDS 22484 25027 . - 0 ID=cds-WP_000049250.1;Parent=gene-CCO34_RS23480;Dbxref=GenBank:WP_000049250.1;Name=WP_000049250.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=CCO34_RS23480;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049250.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 25288 26469 . - . ID=gene-CCO34_RS23485;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=CCO34_RS23485;old_locus_tag=CCO34_23470 NZ_NPMD01000016.1 Protein Homology CDS 25288 26469 . - 0 ID=cds-WP_000185218.1;Parent=gene-CCO34_RS23485;Dbxref=GenBank:WP_000185218.1;Name=WP_000185218.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=CCO34_RS23485;product=MFS transporter TsgA;protein_id=WP_000185218.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 26746 27318 . + . ID=gene-CCO34_RS23490;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=CCO34_RS23490;old_locus_tag=CCO34_23475 NZ_NPMD01000016.1 Protein Homology CDS 26746 27318 . + 0 ID=cds-WP_000920481.1;Parent=gene-CCO34_RS23490;Dbxref=GenBank:WP_000920481.1;Name=WP_000920481.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=CCO34_RS23490;product=peptidylprolyl isomerase A;protein_id=WP_000920481.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 27427 27594 . + . ID=gene-CCO34_RS23495;Name=CCO34_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23495;old_locus_tag=CCO34_23480 NZ_NPMD01000016.1 Protein Homology CDS 27427 27594 . + 0 ID=cds-WP_001519136.1;Parent=gene-CCO34_RS23495;Dbxref=GenBank:WP_001519136.1;Name=WP_001519136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=CCO34_RS23495;product=YhfG family protein;protein_id=WP_001519136.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 27584 28186 . + . ID=gene-CCO34_RS23500;Name=CCO34_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23500;old_locus_tag=CCO34_23485 NZ_NPMD01000016.1 Protein Homology CDS 27584 28186 . + 0 ID=cds-WP_001280665.1;Parent=gene-CCO34_RS23500;Dbxref=GenBank:WP_001280665.1;Name=WP_001280665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=CCO34_RS23500;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280665.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 28218 28781 . + . ID=gene-CCO34_RS23505;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=CCO34_RS23505;old_locus_tag=CCO34_23490 NZ_NPMD01000016.1 Protein Homology CDS 28218 28781 . + 0 ID=cds-WP_000601878.1;Parent=gene-CCO34_RS23505;Dbxref=GenBank:WP_000601878.1;Name=WP_000601878.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=CCO34_RS23505;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601878.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 28867 30084 . + . ID=gene-CCO34_RS23510;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=CCO34_RS23510;old_locus_tag=CCO34_23495 NZ_NPMD01000016.1 Protein Homology CDS 28867 30084 . + 0 ID=cds-WP_000190024.1;Parent=gene-CCO34_RS23510;Dbxref=GenBank:WP_000190024.1;Name=WP_000190024.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=CCO34_RS23510;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000190024.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 30127 32214 . - . ID=gene-CCO34_RS23515;Name=CCO34_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23515;old_locus_tag=CCO34_23500 NZ_NPMD01000016.1 Protein Homology CDS 30127 32214 . - 0 ID=cds-WP_000269312.1;Parent=gene-CCO34_RS23515;Dbxref=GenBank:WP_000269312.1;Name=WP_000269312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=CCO34_RS23515;product=YccS/YhfK family putative transporter;protein_id=WP_000269312.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 32263 32895 . - . ID=gene-CCO34_RS23520;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=CCO34_RS23520;old_locus_tag=CCO34_23505 NZ_NPMD01000016.1 Protein Homology CDS 32263 32895 . - 0 ID=cds-WP_000242758.1;Parent=gene-CCO34_RS23520;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=CCO34_RS23520;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 33203 33607 . + . ID=gene-CCO34_RS23525;Name=CCO34_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23525;old_locus_tag=CCO34_23510 NZ_NPMD01000016.1 Protein Homology CDS 33203 33607 . + 0 ID=cds-WP_001148919.1;Parent=gene-CCO34_RS23525;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=CCO34_RS23525;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 33703 34572 . - . ID=gene-CCO34_RS23530;Name=CCO34_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23530;old_locus_tag=CCO34_23515 NZ_NPMD01000016.1 Protein Homology CDS 33703 34572 . - 0 ID=cds-WP_001274690.1;Parent=gene-CCO34_RS23530;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=CCO34_RS23530;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 34624 34842 . - . ID=gene-CCO34_RS23535;Name=CCO34_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23535;old_locus_tag=CCO34_23520 NZ_NPMD01000016.1 Protein Homology CDS 34624 34842 . - 0 ID=cds-WP_000586568.1;Parent=gene-CCO34_RS23535;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=CCO34_RS23535;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 34839 35906 . - . ID=gene-CCO34_RS23540;Name=CCO34_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23540;old_locus_tag=CCO34_23525 NZ_NPMD01000016.1 Protein Homology CDS 34839 35906 . - 0 ID=cds-WP_001214109.1;Parent=gene-CCO34_RS23540;Dbxref=GenBank:WP_001214109.1;Name=WP_001214109.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=CCO34_RS23540;product=hydrolase;protein_id=WP_001214109.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 36104 36415 . + . ID=gene-CCO34_RS23545;Name=CCO34_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23545;old_locus_tag=CCO34_23530 NZ_NPMD01000016.1 Protein Homology CDS 36104 36415 . + 0 ID=cds-WP_000047689.1;Parent=gene-CCO34_RS23545;Dbxref=GenBank:WP_000047689.1;Name=WP_000047689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=CCO34_RS23545;product=monooxygenase;protein_id=WP_000047689.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 36417 36638 . - . ID=gene-CCO34_RS23550;Name=CCO34_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23550;old_locus_tag=CCO34_23535 NZ_NPMD01000016.1 Protein Homology CDS 36417 36638 . - 0 ID=cds-WP_001054033.1;Parent=gene-CCO34_RS23550;Dbxref=GenBank:WP_001054033.1;Name=WP_001054033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=CCO34_RS23550;product=LysR family transcriptional regulator;protein_id=WP_001054033.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 36677 38584 . - . ID=gene-CCO34_RS23555;Name=CCO34_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23555;old_locus_tag=CCO34_23540 NZ_NPMD01000016.1 Protein Homology CDS 36677 38584 . - 0 ID=cds-WP_000634756.1;Parent=gene-CCO34_RS23555;Dbxref=GenBank:WP_000634756.1;Name=WP_000634756.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=CCO34_RS23555;product=ABC transporter ATP-binding protein;protein_id=WP_000634756.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 38850 39401 . + . ID=gene-CCO34_RS23560;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=CCO34_RS23560;old_locus_tag=CCO34_23545 NZ_NPMD01000016.1 Protein Homology CDS 38850 39401 . + 0 ID=cds-WP_000081820.1;Parent=gene-CCO34_RS23560;Dbxref=GenBank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=CCO34_RS23560;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 39401 41206 . + . ID=gene-CCO34_RS23565;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=CCO34_RS23565;old_locus_tag=CCO34_23550 NZ_NPMD01000016.1 Protein Homology CDS 39401 41206 . + 0 ID=cds-WP_000398139.1;Parent=gene-CCO34_RS23565;Dbxref=GenBank:WP_000398139.1;Name=WP_000398139.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=CCO34_RS23565;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000398139.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 41217 41417 . + . ID=gene-CCO34_RS23570;Name=CCO34_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23570;old_locus_tag=CCO34_23555 NZ_NPMD01000016.1 Protein Homology CDS 41217 41417 . + 0 ID=cds-WP_001007735.1;Parent=gene-CCO34_RS23570;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=CCO34_RS23570;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 41512 42102 . + . ID=gene-CCO34_RS23575;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=CCO34_RS23575;old_locus_tag=CCO34_23560 NZ_NPMD01000016.1 Protein Homology CDS 41512 42102 . + 0 ID=cds-WP_000861341.1;Parent=gene-CCO34_RS23575;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=CCO34_RS23575;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 42291 42509 . - . ID=gene-CCO34_RS23580;Name=CCO34_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23580;old_locus_tag=CCO34_23565 NZ_NPMD01000016.1 Protein Homology CDS 42291 42509 . - 0 ID=cds-WP_001152701.1;Parent=gene-CCO34_RS23580;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=CCO34_RS23580;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 42729 43547 . + . ID=gene-CCO34_RS23585;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=CCO34_RS23585;old_locus_tag=CCO34_23570 NZ_NPMD01000016.1 Protein Homology CDS 42729 43547 . + 0 ID=cds-WP_000838222.1;Parent=gene-CCO34_RS23585;Dbxref=GenBank:WP_000838222.1;Name=WP_000838222.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=CCO34_RS23585;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838222.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 43824 44546 . + . ID=gene-CCO34_RS23590;Name=CCO34_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23590;old_locus_tag=CCO34_23575 NZ_NPMD01000016.1 Protein Homology CDS 43824 44546 . + 0 ID=cds-WP_000091471.1;Parent=gene-CCO34_RS23590;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=CCO34_RS23590;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 44546 44932 . + . ID=gene-CCO34_RS23595;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=CCO34_RS23595;old_locus_tag=CCO34_23580 NZ_NPMD01000016.1 Protein Homology CDS 44546 44932 . + 0 ID=cds-WP_001268010.1;Parent=gene-CCO34_RS23595;Dbxref=GenBank:WP_001268010.1;Name=WP_001268010.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=CCO34_RS23595;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268010.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 44932 45288 . + . ID=gene-CCO34_RS23600;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=CCO34_RS23600;old_locus_tag=CCO34_23585 NZ_NPMD01000016.1 Protein Homology CDS 44932 45288 . + 0 ID=cds-WP_000820705.1;Parent=gene-CCO34_RS23600;Dbxref=GenBank:WP_000820705.1;Name=WP_000820705.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=CCO34_RS23600;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820705.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 45296 45583 . + . ID=gene-CCO34_RS23605;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=CCO34_RS23605;old_locus_tag=CCO34_23590 NZ_NPMD01000016.1 Protein Homology CDS 45296 45583 . + 0 ID=cds-WP_000903398.1;Parent=gene-CCO34_RS23605;Dbxref=GenBank:WP_000903398.1;Name=WP_000903398.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=CCO34_RS23605;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903398.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 45709 46083 . + . ID=gene-CCO34_RS23610;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CCO34_RS23610;old_locus_tag=CCO34_23595 NZ_NPMD01000016.1 Protein Homology CDS 45709 46083 . + 0 ID=cds-WP_000246815.1;Parent=gene-CCO34_RS23610;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=CCO34_RS23610;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 46179 46649 . + . ID=gene-CCO34_RS23615;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CCO34_RS23615;old_locus_tag=CCO34_23600 NZ_NPMD01000016.1 Protein Homology CDS 46179 46649 . + 0 ID=cds-WP_001138043.1;Parent=gene-CCO34_RS23615;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=CCO34_RS23615;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 46746 48860 . + . ID=gene-CCO34_RS23620;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CCO34_RS23620;old_locus_tag=CCO34_23605 NZ_NPMD01000016.1 Protein Homology CDS 46746 48860 . + 0 ID=cds-WP_000124693.1;Parent=gene-CCO34_RS23620;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=CCO34_RS23620;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11 NZ_NPMD01000016.1 RefSeq gene 48932 49217 . + . ID=gene-CCO34_RS23625;Name=CCO34_RS23625;end_range=49217,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23625;old_locus_tag=CCO34_23610;partial=true NZ_NPMD01000016.1 Protein Homology CDS 48932 49217 . + 0 ID=cds-WP_000031682.1;Parent=gene-CCO34_RS23625;Dbxref=GenBank:WP_000031682.1;Name=WP_000031682.1;Ontology_term=GO:0003924,GO:0005525;end_range=49217,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO34_RS23625;partial=true;product=GTP-binding protein;protein_id=WP_000031682.1;transl_table=11 ##sequence-region NZ_NPMD01000017.1 1 44896 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000017.1 RefSeq region 1 44896 . + . ID=NZ_NPMD01000017.1:1..44896;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000017.1 RefSeq gene 1 1120 . + . ID=gene-CCO34_RS23630;Name=CCO34_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23630;old_locus_tag=CCO34_23615;partial=true;start_range=.,1 NZ_NPMD01000017.1 Protein Homology CDS 1 1120 . + 1 ID=cds-WP_094965640.1;Parent=gene-CCO34_RS23630;Dbxref=GenBank:WP_094965640.1;Name=WP_094965640.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=CCO34_RS23630;partial=true;product=flagellin;protein_id=WP_094965640.1;start_range=.,1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 1188 1727 . + . ID=gene-CCO34_RS23635;Name=fljA;gbkey=Gene;gene=fljA;gene_biotype=protein_coding;locus_tag=CCO34_RS23635;old_locus_tag=CCO34_23620 NZ_NPMD01000017.1 Protein Homology CDS 1188 1727 . + 0 ID=cds-WP_024148352.1;Parent=gene-CCO34_RS23635;Dbxref=GenBank:WP_024148352.1;Name=WP_024148352.1;gbkey=CDS;gene=fljA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461697.1;locus_tag=CCO34_RS23635;product=phase 1 flagellin gene repressor FljA;protein_id=WP_024148352.1;transl_table=11 NZ_NPMD01000017.1 RefSeq pseudogene 1755 1977 . + . ID=gene-CCO34_RS25970;Name=CCO34_RS25970;end_range=1977,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25970;old_locus_tag=CCO34_23625;partial=true;pseudo=true;start_range=.,1755 NZ_NPMD01000017.1 Protein Homology CDS 1755 1977 . + 0 ID=cds-CCO34_RS25970;Parent=gene-CCO34_RS25970;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1977,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784655.1;locus_tag=CCO34_RS25970;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1755;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 2252 2614 . - . ID=gene-CCO34_RS23645;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CCO34_RS23645;old_locus_tag=CCO34_23630 NZ_NPMD01000017.1 cmsearch tmRNA 2252 2614 . - . ID=rna-CCO34_RS23645;Parent=gene-CCO34_RS23645;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS23645;product=transfer-messenger RNA NZ_NPMD01000017.1 cmsearch exon 2252 2614 . - . ID=exon-CCO34_RS23645-1;Parent=rna-CCO34_RS23645;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS23645;product=transfer-messenger RNA NZ_NPMD01000017.1 RefSeq gene 2686 3849 . - . ID=gene-CCO34_RS23650;Name=CCO34_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23650;old_locus_tag=CCO34_23635 NZ_NPMD01000017.1 Protein Homology CDS 2686 3849 . - 0 ID=cds-WP_072101041.1;Parent=gene-CCO34_RS23650;Dbxref=GenBank:WP_072101041.1;Name=WP_072101041.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=CCO34_RS23650;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_072101041.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 3857 6037 . - . ID=gene-CCO34_RS23655;Name=CCO34_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23655;old_locus_tag=CCO34_23640 NZ_NPMD01000017.1 Protein Homology CDS 3857 6037 . - 0 ID=cds-WP_000196142.1;Parent=gene-CCO34_RS23655;Dbxref=GenBank:WP_000196142.1;Name=WP_000196142.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=CCO34_RS23655;product=type I secretion system permease/ATPase;protein_id=WP_000196142.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 6034 7443 . - . ID=gene-CCO34_RS23660;Name=CCO34_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23660;old_locus_tag=CCO34_23645 NZ_NPMD01000017.1 Protein Homology CDS 6034 7443 . - 0 ID=cds-WP_000533864.1;Parent=gene-CCO34_RS23660;Dbxref=GenBank:WP_000533864.1;Name=WP_000533864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=CCO34_RS23660;product=TolC family outer membrane protein;protein_id=WP_000533864.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 7508 18982 . - . ID=gene-CCO34_RS23665;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=CCO34_RS23665;old_locus_tag=CCO34_23650 NZ_NPMD01000017.1 Protein Homology CDS 7508 18982 . - 0 ID=cds-WP_001237685.1;Parent=gene-CCO34_RS23665;Dbxref=GenBank:WP_001237685.1;Name=WP_001237685.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=CCO34_RS23665;product=biofilm-associated protein BapA;protein_id=WP_001237685.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 19602 20084 . - . ID=gene-CCO34_RS23670;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CCO34_RS23670;old_locus_tag=CCO34_23655 NZ_NPMD01000017.1 Protein Homology CDS 19602 20084 . - 0 ID=cds-WP_001518569.1;Parent=gene-CCO34_RS23670;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=CCO34_RS23670;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 20273 20710 . + . ID=gene-CCO34_RS23675;Name=CCO34_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23675;old_locus_tag=CCO34_23660 NZ_NPMD01000017.1 Protein Homology CDS 20273 20710 . + 0 ID=cds-WP_001537508.1;Parent=gene-CCO34_RS23675;Dbxref=GenBank:WP_001537508.1;Name=WP_001537508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=CCO34_RS23675;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001537508.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 20700 20990 . + . ID=gene-CCO34_RS23680;Name=CCO34_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23680;old_locus_tag=CCO34_23665 NZ_NPMD01000017.1 Protein Homology CDS 20700 20990 . + 0 ID=cds-WP_001112990.1;Parent=gene-CCO34_RS23680;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=CCO34_RS23680;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 21156 21494 . - . ID=gene-CCO34_RS23685;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=CCO34_RS23685;old_locus_tag=CCO34_23670 NZ_NPMD01000017.1 Protein Homology CDS 21156 21494 . - 0 ID=cds-WP_001203445.1;Parent=gene-CCO34_RS23685;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=CCO34_RS23685;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 21643 23304 . - . ID=gene-CCO34_RS23690;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CCO34_RS23690;old_locus_tag=CCO34_23675 NZ_NPMD01000017.1 Protein Homology CDS 21643 23304 . - 0 ID=cds-WP_000880965.1;Parent=gene-CCO34_RS23690;Dbxref=GenBank:WP_000880965.1;Name=WP_000880965.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=CCO34_RS23690;product=DNA repair protein RecN;protein_id=WP_000880965.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 23390 24268 . - . ID=gene-CCO34_RS23695;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=CCO34_RS23695;old_locus_tag=CCO34_23680 NZ_NPMD01000017.1 Protein Homology CDS 23390 24268 . - 0 ID=cds-WP_001059160.1;Parent=gene-CCO34_RS23695;Dbxref=GenBank:WP_001059160.1;Name=WP_001059160.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=CCO34_RS23695;product=NAD(+) kinase;protein_id=WP_001059160.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 24391 24981 . + . ID=gene-CCO34_RS23705;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CCO34_RS23705;old_locus_tag=CCO34_23690 NZ_NPMD01000017.1 Protein Homology CDS 24391 24981 . + 0 ID=cds-WP_001518875.1;Parent=gene-CCO34_RS23705;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=CCO34_RS23705;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 25016 25621 . - . ID=gene-CCO34_RS23710;Name=CCO34_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23710;old_locus_tag=CCO34_23695 NZ_NPMD01000017.1 Protein Homology CDS 25016 25621 . - 0 ID=cds-WP_001287923.1;Parent=gene-CCO34_RS23710;Dbxref=GenBank:WP_001287923.1;Name=WP_001287923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=CCO34_RS23710;product=DUF6630 family protein;protein_id=WP_001287923.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 25742 27028 . - . ID=gene-CCO34_RS23715;Name=CCO34_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23715;old_locus_tag=CCO34_23700 NZ_NPMD01000017.1 Protein Homology CDS 25742 27028 . - 0 ID=cds-WP_127172650.1;Parent=gene-CCO34_RS23715;Dbxref=GenBank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=CCO34_RS23715;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 27048 27839 . - . ID=gene-CCO34_RS23720;Name=CCO34_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23720;old_locus_tag=CCO34_23705 NZ_NPMD01000017.1 Protein Homology CDS 27048 27839 . - 0 ID=cds-WP_001537507.1;Parent=gene-CCO34_RS23720;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=CCO34_RS23720;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 28005 29366 . + . ID=gene-CCO34_RS23730;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CCO34_RS23730;old_locus_tag=CCO34_23715 NZ_NPMD01000017.1 Protein Homology CDS 28005 29366 . + 0 ID=cds-WP_000460052.1;Parent=gene-CCO34_RS23730;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=CCO34_RS23730;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 29619 29867 . + . ID=gene-CCO34_RS23735;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CCO34_RS23735;old_locus_tag=CCO34_23720 NZ_NPMD01000017.1 Protein Homology CDS 29619 29867 . + 0 ID=cds-WP_000256453.1;Parent=gene-CCO34_RS23735;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=CCO34_RS23735;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 29886 30434 . + . ID=gene-CCO34_RS23740;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CCO34_RS23740;old_locus_tag=CCO34_23725 NZ_NPMD01000017.1 Protein Homology CDS 29886 30434 . + 0 ID=cds-WP_000043266.1;Parent=gene-CCO34_RS23740;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=CCO34_RS23740;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 30479 31246 . + . ID=gene-CCO34_RS23745;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CCO34_RS23745;old_locus_tag=CCO34_23730 NZ_NPMD01000017.1 Protein Homology CDS 30479 31246 . + 0 ID=cds-WP_000469813.1;Parent=gene-CCO34_RS23745;Dbxref=GenBank:WP_000469813.1;Name=WP_000469813.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=CCO34_RS23745;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469813.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 31287 31634 . + . ID=gene-CCO34_RS23750;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CCO34_RS23750;old_locus_tag=CCO34_23735 NZ_NPMD01000017.1 Protein Homology CDS 31287 31634 . + 0 ID=cds-WP_000065257.1;Parent=gene-CCO34_RS23750;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=CCO34_RS23750;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 31791 33011 . - . ID=gene-CCO34_RS23755;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=CCO34_RS23755;old_locus_tag=CCO34_23740 NZ_NPMD01000017.1 Protein Homology CDS 31791 33011 . - 0 ID=cds-WP_001030985.1;Parent=gene-CCO34_RS23755;Dbxref=GenBank:WP_001030985.1;Name=WP_001030985.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=CCO34_RS23755;product=diguanylate cyclase DgcN;protein_id=WP_001030985.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 33004 33522 . - . ID=gene-CCO34_RS23760;Name=CCO34_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23760;old_locus_tag=CCO34_23745 NZ_NPMD01000017.1 Protein Homology CDS 33004 33522 . - 0 ID=cds-WP_001212380.1;Parent=gene-CCO34_RS23760;Dbxref=GenBank:WP_001212380.1;Name=WP_001212380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=CCO34_RS23760;product=YfiR family protein;protein_id=WP_001212380.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 33963 35033 . + . ID=gene-CCO34_RS23765;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=CCO34_RS23765;old_locus_tag=CCO34_23750 NZ_NPMD01000017.1 Protein Homology CDS 33963 35033 . + 0 ID=cds-WP_001168062.1;Parent=gene-CCO34_RS23765;Dbxref=GenBank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=CCO34_RS23765;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 35043 36164 . + . ID=gene-CCO34_RS23770;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=CCO34_RS23770;old_locus_tag=CCO34_23755 NZ_NPMD01000017.1 Protein Homology CDS 35043 36164 . + 0 ID=cds-WP_000225191.1;Parent=gene-CCO34_RS23770;Dbxref=GenBank:WP_000225191.1;Name=WP_000225191.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=CCO34_RS23770;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225191.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 36222 37130 . + . ID=gene-CCO34_RS23775;Name=CCO34_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23775;old_locus_tag=CCO34_23760 NZ_NPMD01000017.1 Protein Homology CDS 36222 37130 . + 0 ID=cds-WP_000210991.1;Parent=gene-CCO34_RS23775;Dbxref=GenBank:WP_000210991.1;Name=WP_000210991.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=CCO34_RS23775;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_000210991.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 37091 38251 . - . ID=gene-CCO34_RS23780;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=CCO34_RS23780;old_locus_tag=CCO34_23765 NZ_NPMD01000017.1 Protein Homology CDS 37091 38251 . - 0 ID=cds-WP_000200083.1;Parent=gene-CCO34_RS23780;Dbxref=GenBank:WP_000200083.1;Name=WP_000200083.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=CCO34_RS23780;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200083.1;transl_table=11 NZ_NPMD01000017.1 cmsearch sequence_feature 38274 38399 . - . ID=id-NZ_NPMD01000017.1:38274..38399;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMD01000017.1 RefSeq gene 38351 38398 . - . ID=gene-CCO34_RS25460;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=CCO34_RS25460 NZ_NPMD01000017.1 Protein Homology CDS 38351 38398 . - 0 ID=cds-WP_010989056.1;Parent=gene-CCO34_RS25460;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=CCO34_RS25460;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 38502 38840 . - . ID=gene-CCO34_RS23785;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CCO34_RS23785;old_locus_tag=CCO34_23770 NZ_NPMD01000017.1 Protein Homology CDS 38502 38840 . - 0 ID=cds-WP_000178449.1;Parent=gene-CCO34_RS23785;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=CCO34_RS23785;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 39112 39849 . - . ID=gene-CCO34_RS23790;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=CCO34_RS23790;old_locus_tag=CCO34_23775 NZ_NPMD01000017.1 Protein Homology CDS 39112 39849 . - 0 ID=cds-WP_000197660.1;Parent=gene-CCO34_RS23790;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=CCO34_RS23790;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 39981 40961 . + . ID=gene-CCO34_RS23795;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=CCO34_RS23795;old_locus_tag=CCO34_23780 NZ_NPMD01000017.1 Protein Homology CDS 39981 40961 . + 0 ID=cds-WP_000079130.1;Parent=gene-CCO34_RS23795;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=CCO34_RS23795;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 40958 41689 . + . ID=gene-CCO34_RS23800;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=CCO34_RS23800;old_locus_tag=CCO34_23785 NZ_NPMD01000017.1 Protein Homology CDS 40958 41689 . + 0 ID=cds-WP_000992639.1;Parent=gene-CCO34_RS23800;Dbxref=GenBank:WP_000992639.1;Name=WP_000992639.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=CCO34_RS23800;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992639.1;transl_table=11 NZ_NPMD01000017.1 RefSeq gene 41819 44392 . + . ID=gene-CCO34_RS23805;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CCO34_RS23805;old_locus_tag=CCO34_23790 NZ_NPMD01000017.1 Protein Homology CDS 41819 44392 . + 0 ID=cds-WP_001235092.1;Parent=gene-CCO34_RS23805;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=CCO34_RS23805;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11 ##sequence-region NZ_NPMD01000018.1 1 41517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000018.1 RefSeq region 1 41517 . + . ID=NZ_NPMD01000018.1:1..41517;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000018.1 RefSeq pseudogene 1 167 . - . ID=gene-CCO34_RS23810;Name=CCO34_RS23810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS23810;old_locus_tag=CCO34_23795;partial=true;pseudo=true;start_range=.,1 NZ_NPMD01000018.1 Protein Homology CDS 1 167 . - 0 ID=cds-CCO34_RS23810;Parent=gene-CCO34_RS23810;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO34_RS23810;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 273 4160 . - . ID=gene-CCO34_RS23815;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=CCO34_RS23815;old_locus_tag=CCO34_23800 NZ_NPMD01000018.1 Protein Homology CDS 273 4160 . - 0 ID=cds-WP_000970047.1;Parent=gene-CCO34_RS23815;Dbxref=GenBank:WP_000970047.1;Name=WP_000970047.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=CCO34_RS23815;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970047.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 4185 4415 . + . ID=gene-CCO34_RS23820;Name=CCO34_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23820;old_locus_tag=CCO34_23805 NZ_NPMD01000018.1 Protein Homology CDS 4185 4415 . + 0 ID=cds-WP_001669324.1;Parent=gene-CCO34_RS23820;Dbxref=GenBank:WP_001669324.1;Name=WP_001669324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669324.1;locus_tag=CCO34_RS23820;product=hypothetical protein;protein_id=WP_001669324.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 4416 5960 . + . ID=gene-CCO34_RS23825;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=CCO34_RS23825;old_locus_tag=CCO34_23810 NZ_NPMD01000018.1 Protein Homology CDS 4416 5960 . + 0 ID=cds-WP_000734248.1;Parent=gene-CCO34_RS23825;Dbxref=GenBank:WP_000734248.1;Name=WP_000734248.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=CCO34_RS23825;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734248.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 6011 6562 . - . ID=gene-CCO34_RS23830;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CCO34_RS23830;old_locus_tag=CCO34_23815 NZ_NPMD01000018.1 Protein Homology CDS 6011 6562 . - 0 ID=cds-WP_001134566.1;Parent=gene-CCO34_RS23830;Dbxref=GenBank:WP_001134566.1;Name=WP_001134566.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=CCO34_RS23830;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134566.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 6587 7222 . - . ID=gene-CCO34_RS23835;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=CCO34_RS23835;old_locus_tag=CCO34_23820 NZ_NPMD01000018.1 Protein Homology CDS 6587 7222 . - 0 ID=cds-WP_000253558.1;Parent=gene-CCO34_RS23835;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=CCO34_RS23835;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 7226 8587 . - . ID=gene-CCO34_RS23840;Name=CCO34_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23840;old_locus_tag=CCO34_23825 NZ_NPMD01000018.1 Protein Homology CDS 7226 8587 . - 0 ID=cds-WP_023228738.1;Parent=gene-CCO34_RS23840;Dbxref=GenBank:WP_023228738.1;Name=WP_023228738.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=CCO34_RS23840;product=PTS transporter subunit EIIC;protein_id=WP_023228738.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 8598 9491 . - . ID=gene-CCO34_RS23845;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CCO34_RS23845;old_locus_tag=CCO34_23830 NZ_NPMD01000018.1 Protein Homology CDS 8598 9491 . - 0 ID=cds-WP_023228737.1;Parent=gene-CCO34_RS23845;Dbxref=GenBank:WP_023228737.1;Name=WP_023228737.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=CCO34_RS23845;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_023228737.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 9607 10455 . + . ID=gene-CCO34_RS23850;Name=CCO34_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23850;old_locus_tag=CCO34_23835 NZ_NPMD01000018.1 Protein Homology CDS 9607 10455 . + 0 ID=cds-WP_000995703.1;Parent=gene-CCO34_RS23850;Dbxref=GenBank:WP_000995703.1;Name=WP_000995703.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=CCO34_RS23850;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995703.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 10494 11411 . - . ID=gene-CCO34_RS23855;Name=CCO34_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23855;old_locus_tag=CCO34_23840 NZ_NPMD01000018.1 Protein Homology CDS 10494 11411 . - 0 ID=cds-WP_000684022.1;Parent=gene-CCO34_RS23855;Dbxref=GenBank:WP_000684022.1;Name=WP_000684022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=CCO34_RS23855;product=oxidoreductase;protein_id=WP_000684022.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 11433 12629 . - . ID=gene-CCO34_RS23860;Name=CCO34_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23860;old_locus_tag=CCO34_23845 NZ_NPMD01000018.1 Protein Homology CDS 11433 12629 . - 0 ID=cds-WP_001276364.1;Parent=gene-CCO34_RS23860;Dbxref=GenBank:WP_001276364.1;Name=WP_001276364.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=CCO34_RS23860;product=L-lactate MFS transporter;protein_id=WP_001276364.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 12745 13656 . + . ID=gene-CCO34_RS23865;Name=CCO34_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23865;old_locus_tag=CCO34_23850 NZ_NPMD01000018.1 Protein Homology CDS 12745 13656 . + 0 ID=cds-WP_001581956.1;Parent=gene-CCO34_RS23865;Dbxref=GenBank:WP_001581956.1;Name=WP_001581956.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001581956.1;locus_tag=CCO34_RS23865;product=LysR family transcriptional regulator;protein_id=WP_001581956.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 13709 13969 . + . ID=gene-CCO34_RS23870;Name=CCO34_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23870;old_locus_tag=CCO34_23855 NZ_NPMD01000018.1 Protein Homology CDS 13709 13969 . + 0 ID=cds-WP_001196290.1;Parent=gene-CCO34_RS23870;Dbxref=GenBank:WP_001196290.1;Name=WP_001196290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=CCO34_RS23870;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196290.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 14081 14461 . - . ID=gene-CCO34_RS23875;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CCO34_RS23875;old_locus_tag=CCO34_23860 NZ_NPMD01000018.1 Protein Homology CDS 14081 14461 . - 0 ID=cds-WP_000986041.1;Parent=gene-CCO34_RS23875;Dbxref=GenBank:WP_000986041.1;Name=WP_000986041.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=CCO34_RS23875;product=holo-ACP synthase;protein_id=WP_000986041.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 14461 15192 . - . ID=gene-CCO34_RS23880;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=CCO34_RS23880;old_locus_tag=CCO34_23865 NZ_NPMD01000018.1 Protein Homology CDS 14461 15192 . - 0 ID=cds-WP_000818964.1;Parent=gene-CCO34_RS23880;Dbxref=GenBank:WP_000818964.1;Name=WP_000818964.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=CCO34_RS23880;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818964.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 15204 15932 . - . ID=gene-CCO34_RS23885;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CCO34_RS23885;old_locus_tag=CCO34_23870 NZ_NPMD01000018.1 Protein Homology CDS 15204 15932 . - 0 ID=cds-WP_023228736.1;Parent=gene-CCO34_RS23885;Dbxref=GenBank:WP_023228736.1;Name=WP_023228736.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=CCO34_RS23885;product=DNA repair protein RecO;protein_id=WP_023228736.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 15944 16849 . - . ID=gene-CCO34_RS23890;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CCO34_RS23890;old_locus_tag=CCO34_23875 NZ_NPMD01000018.1 Protein Homology CDS 15944 16849 . - 0 ID=cds-WP_000102230.1;Parent=gene-CCO34_RS23890;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=CCO34_RS23890;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 16846 17526 . - . ID=gene-CCO34_RS23895;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CCO34_RS23895;old_locus_tag=CCO34_23880 NZ_NPMD01000018.1 Protein Homology CDS 16846 17526 . - 0 ID=cds-WP_001068341.1;Parent=gene-CCO34_RS23895;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=CCO34_RS23895;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 17800 18774 . - . ID=gene-CCO34_RS23905;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CCO34_RS23905;old_locus_tag=CCO34_23890 NZ_NPMD01000018.1 Protein Homology CDS 17800 18774 . - 0 ID=cds-WP_000002559.1;Parent=gene-CCO34_RS23905;Dbxref=GenBank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=CCO34_RS23905;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 18791 20590 . - . ID=gene-CCO34_RS23910;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CCO34_RS23910;old_locus_tag=CCO34_23895 NZ_NPMD01000018.1 Protein Homology CDS 18791 20590 . - 0 ID=cds-WP_000790154.1;Parent=gene-CCO34_RS23910;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=CCO34_RS23910;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 20842 21321 . - . ID=gene-CCO34_RS23920;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=CCO34_RS23920;old_locus_tag=CCO34_23905 NZ_NPMD01000018.1 Protein Homology CDS 20842 21321 . - 0 ID=cds-WP_000589087.1;Parent=gene-CCO34_RS23920;Dbxref=GenBank:WP_000589087.1;Name=WP_000589087.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=CCO34_RS23920;product=SoxR-reducing system protein RseC;protein_id=WP_000589087.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 21318 22274 . - . ID=gene-CCO34_RS23925;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=CCO34_RS23925;old_locus_tag=CCO34_23910 NZ_NPMD01000018.1 Protein Homology CDS 21318 22274 . - 0 ID=cds-WP_000812019.1;Parent=gene-CCO34_RS23925;Dbxref=GenBank:WP_000812019.1;Name=WP_000812019.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=CCO34_RS23925;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812019.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 22274 22924 . - . ID=gene-CCO34_RS23930;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=CCO34_RS23930;old_locus_tag=CCO34_23915 NZ_NPMD01000018.1 Protein Homology CDS 22274 22924 . - 0 ID=cds-WP_001168374.1;Parent=gene-CCO34_RS23930;Dbxref=GenBank:WP_001168374.1;Name=WP_001168374.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=CCO34_RS23930;product=anti-sigma-E factor RseA;protein_id=WP_001168374.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 22956 23531 . - . ID=gene-CCO34_RS23935;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CCO34_RS23935;old_locus_tag=CCO34_23920 NZ_NPMD01000018.1 Protein Homology CDS 22956 23531 . - 0 ID=cds-WP_000003307.1;Parent=gene-CCO34_RS23935;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=CCO34_RS23935;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 23528 23692 . - . ID=gene-CCO34_RS25470;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=CCO34_RS25470 NZ_NPMD01000018.1 Protein Homology CDS 23528 23692 . - 0 ID=cds-WP_014344135.1;Parent=gene-CCO34_RS25470;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=CCO34_RS25470;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 23956 25578 . + . ID=gene-CCO34_RS23945;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=CCO34_RS23945;old_locus_tag=CCO34_23930 NZ_NPMD01000018.1 Protein Homology CDS 23956 25578 . + 0 ID=cds-WP_000989164.1;Parent=gene-CCO34_RS23945;Dbxref=GenBank:WP_000989164.1;Name=WP_000989164.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=CCO34_RS23945;product=L-aspartate oxidase;protein_id=WP_000989164.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 25563 26300 . - . ID=gene-CCO34_RS23950;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=CCO34_RS23950;old_locus_tag=CCO34_23935 NZ_NPMD01000018.1 Protein Homology CDS 25563 26300 . - 0 ID=cds-WP_000083339.1;Parent=gene-CCO34_RS23950;Dbxref=GenBank:WP_000083339.1;Name=WP_000083339.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=CCO34_RS23950;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_000083339.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 26430 27764 . + . ID=gene-CCO34_RS23955;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=CCO34_RS23955;old_locus_tag=CCO34_23940 NZ_NPMD01000018.1 Protein Homology CDS 26430 27764 . + 0 ID=cds-WP_000219174.1;Parent=gene-CCO34_RS23955;Dbxref=GenBank:WP_000219174.1;Name=WP_000219174.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=CCO34_RS23955;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219174.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 27782 28681 . - . ID=gene-CCO34_RS23960;Name=CCO34_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23960;old_locus_tag=CCO34_23945 NZ_NPMD01000018.1 Protein Homology CDS 27782 28681 . - 0 ID=cds-WP_001521114.1;Parent=gene-CCO34_RS23960;Dbxref=GenBank:WP_001521114.1;Name=WP_001521114.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=CCO34_RS23960;product=LysR family transcriptional regulator;protein_id=WP_001521114.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 28784 29371 . + . ID=gene-CCO34_RS23965;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=CCO34_RS23965;old_locus_tag=CCO34_23950 NZ_NPMD01000018.1 Protein Homology CDS 28784 29371 . + 0 ID=cds-WP_000188414.1;Parent=gene-CCO34_RS23965;Dbxref=GenBank:WP_000188414.1;Name=WP_000188414.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=CCO34_RS23965;product=cysteine/O-acetylserine transporter;protein_id=WP_000188414.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 29433 29816 . - . ID=gene-CCO34_RS23970;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=CCO34_RS23970;old_locus_tag=CCO34_23955 NZ_NPMD01000018.1 Protein Homology CDS 29433 29816 . - 0 ID=cds-WP_000627811.1;Parent=gene-CCO34_RS23970;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=CCO34_RS23970;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 30135 30824 . + . ID=gene-CCO34_RS23975;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=CCO34_RS23975;old_locus_tag=CCO34_23960 NZ_NPMD01000018.1 Protein Homology CDS 30135 30824 . + 0 ID=cds-WP_000179978.1;Parent=gene-CCO34_RS23975;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=CCO34_RS23975;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 30940 31977 . - . ID=gene-CCO34_RS23980;Name=CCO34_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS23980;old_locus_tag=CCO34_23965 NZ_NPMD01000018.1 Protein Homology CDS 30940 31977 . - 0 ID=cds-WP_000997368.1;Parent=gene-CCO34_RS23980;Dbxref=GenBank:WP_000997368.1;Name=WP_000997368.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=CCO34_RS23980;product=tRNA/rRNA methyltransferase;protein_id=WP_000997368.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 32181 32600 . + . ID=gene-CCO34_RS23990;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=CCO34_RS23990;old_locus_tag=CCO34_23975 NZ_NPMD01000018.1 Protein Homology CDS 32181 32600 . + 0 ID=cds-WP_001098732.1;Parent=gene-CCO34_RS23990;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=CCO34_RS23990;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 32673 33353 . + . ID=gene-CCO34_RS23995;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=CCO34_RS23995;old_locus_tag=CCO34_23980 NZ_NPMD01000018.1 Protein Homology CDS 32673 33353 . + 0 ID=cds-WP_000183642.1;Parent=gene-CCO34_RS23995;Dbxref=GenBank:WP_000183642.1;Name=WP_000183642.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=CCO34_RS23995;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000183642.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 33407 36067 . + . ID=gene-CCO34_RS24000;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=CCO34_RS24000;old_locus_tag=CCO34_23985 NZ_NPMD01000018.1 Protein Homology CDS 33407 36067 . + 0 ID=cds-WP_000082650.1;Parent=gene-CCO34_RS24000;Dbxref=GenBank:WP_000082650.1;Name=WP_000082650.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=CCO34_RS24000;product=protein lysine acetyltransferase;protein_id=WP_000082650.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 36182 37537 . + . ID=gene-CCO34_RS24005;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=CCO34_RS24005;old_locus_tag=CCO34_23990 NZ_NPMD01000018.1 Protein Homology CDS 36182 37537 . + 0 ID=cds-WP_000949286.1;Parent=gene-CCO34_RS24005;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=CCO34_RS24005;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 37582 37905 . + . ID=gene-CCO34_RS24010;Name=CCO34_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24010;old_locus_tag=CCO34_23995 NZ_NPMD01000018.1 Protein Homology CDS 37582 37905 . + 0 ID=cds-WP_001264473.1;Parent=gene-CCO34_RS24010;Dbxref=GenBank:WP_001264473.1;Name=WP_001264473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=CCO34_RS24010;product=YfiM family lipoprotein;protein_id=WP_001264473.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 37902 39203 . - . ID=gene-CCO34_RS24015;Name=CCO34_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24015;old_locus_tag=CCO34_24000 NZ_NPMD01000018.1 Protein Homology CDS 37902 39203 . - 0 ID=cds-WP_000807819.1;Parent=gene-CCO34_RS24015;Dbxref=GenBank:WP_000807819.1;Name=WP_000807819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=CCO34_RS24015;product=MFS transporter;protein_id=WP_000807819.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 39307 39762 . - . ID=gene-CCO34_RS24020;Name=CCO34_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24020;old_locus_tag=CCO34_24005 NZ_NPMD01000018.1 Protein Homology CDS 39307 39762 . - 0 ID=cds-WP_000985651.1;Parent=gene-CCO34_RS24020;Dbxref=GenBank:WP_000985651.1;Name=WP_000985651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=CCO34_RS24020;product=DUF4385 domain-containing protein;protein_id=WP_000985651.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 39900 40886 . - . ID=gene-CCO34_RS24025;Name=CCO34_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24025;old_locus_tag=CCO34_24010 NZ_NPMD01000018.1 Protein Homology CDS 39900 40886 . - 0 ID=cds-WP_000337540.1;Parent=gene-CCO34_RS24025;Dbxref=GenBank:WP_000337540.1;Name=WP_000337540.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337539.1;locus_tag=CCO34_RS24025;product=IS110 family transposase;protein_id=WP_000337540.1;transl_table=11 NZ_NPMD01000018.1 RefSeq gene 41398 41513 . - . ID=gene-CCO34_RS24030;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO34_RS24030;old_locus_tag=CCO34_24015 NZ_NPMD01000018.1 cmsearch rRNA 41398 41513 . - . ID=rna-CCO34_RS24030;Parent=gene-CCO34_RS24030;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS24030;product=5S ribosomal RNA NZ_NPMD01000018.1 cmsearch exon 41398 41513 . - . ID=exon-CCO34_RS24030-1;Parent=rna-CCO34_RS24030;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS24030;product=5S ribosomal RNA ##sequence-region NZ_NPMD01000019.1 1 35583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000019.1 RefSeq region 1 35583 . + . ID=NZ_NPMD01000019.1:1..35583;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000019.1 RefSeq gene 3 548 . + . ID=gene-CCO34_RS24035;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=CCO34_RS24035;old_locus_tag=CCO34_24020 NZ_NPMD01000019.1 Protein Homology CDS 3 548 . + 0 ID=cds-WP_094965642.1;Parent=gene-CCO34_RS24035;Dbxref=GenBank:WP_094965642.1;Name=WP_094965642.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490568.1;locus_tag=CCO34_RS24035;product=conjugal transfer pilus-stabilizing protein TraP;protein_id=WP_094965642.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 526 771 . + . ID=gene-CCO34_RS24040;Name=CCO34_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24040;old_locus_tag=CCO34_24025 NZ_NPMD01000019.1 Protein Homology CDS 526 771 . + 0 ID=cds-WP_077906723.1;Parent=gene-CCO34_RS24040;Dbxref=GenBank:WP_077906723.1;Name=WP_077906723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490569.1;locus_tag=CCO34_RS24040;product=DUF2689 domain-containing protein;protein_id=WP_077906723.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 768 1283 . + . ID=gene-CCO34_RS24045;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=CCO34_RS24045;old_locus_tag=CCO34_24030 NZ_NPMD01000019.1 Protein Homology CDS 768 1283 . + 0 ID=cds-WP_094965643.1;Parent=gene-CCO34_RS24045;Dbxref=GenBank:WP_094965643.1;Name=WP_094965643.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490570.1;locus_tag=CCO34_RS24045;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_094965643.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 1418 1639 . + . ID=gene-CCO34_RS24050;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=CCO34_RS24050;old_locus_tag=CCO34_24035 NZ_NPMD01000019.1 Protein Homology CDS 1418 1639 . + 0 ID=cds-WP_001278699.1;Parent=gene-CCO34_RS24050;Dbxref=GenBank:WP_001278699.1;Name=WP_001278699.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=CCO34_RS24050;product=conjugal transfer protein TraR;protein_id=WP_001278699.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 1632 2099 . + . ID=gene-CCO34_RS24055;Name=CCO34_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24055;old_locus_tag=CCO34_24040 NZ_NPMD01000019.1 Protein Homology CDS 1632 2099 . + 0 ID=cds-WP_094965645.1;Parent=gene-CCO34_RS24055;Dbxref=GenBank:WP_094965645.1;Name=WP_094965645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490572.1;locus_tag=CCO34_RS24055;product=hypothetical protein;protein_id=WP_094965645.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 2096 2479 . + . ID=gene-CCO34_RS24060;Name=CCO34_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24060;old_locus_tag=CCO34_24045 NZ_NPMD01000019.1 Protein Homology CDS 2096 2479 . + 0 ID=cds-WP_094965646.1;Parent=gene-CCO34_RS24060;Dbxref=GenBank:WP_094965646.1;Name=WP_094965646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000870327.1;locus_tag=CCO34_RS24060;product=hypothetical protein;protein_id=WP_094965646.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 2495 5143 . + . ID=gene-CCO34_RS24065;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=CCO34_RS24065;old_locus_tag=CCO34_24050 NZ_NPMD01000019.1 Protein Homology CDS 2495 5143 . + 0 ID=cds-WP_094965648.1;Parent=gene-CCO34_RS24065;Dbxref=GenBank:WP_094965648.1;Name=WP_094965648.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490573.1;locus_tag=CCO34_RS24065;product=type IV secretion system protein TraC;protein_id=WP_094965648.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 5118 5504 . + . ID=gene-CCO34_RS24070;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=CCO34_RS24070;old_locus_tag=CCO34_24055 NZ_NPMD01000019.1 Protein Homology CDS 5118 5504 . + 0 ID=cds-WP_094965649.1;Parent=gene-CCO34_RS24070;Dbxref=GenBank:WP_094965649.1;Name=WP_094965649.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=CCO34_RS24070;product=type-F conjugative transfer system protein TrbI;protein_id=WP_094965649.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 5501 6133 . + . ID=gene-CCO34_RS24075;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=CCO34_RS24075;old_locus_tag=CCO34_24060 NZ_NPMD01000019.1 Protein Homology CDS 5501 6133 . + 0 ID=cds-WP_094965651.1;Parent=gene-CCO34_RS24075;Dbxref=GenBank:WP_094965651.1;Name=WP_094965651.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=CCO34_RS24075;product=type-F conjugative transfer system protein TraW;protein_id=WP_094965651.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 6130 7116 . + . ID=gene-CCO34_RS24080;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=CCO34_RS24080;old_locus_tag=CCO34_24065 NZ_NPMD01000019.1 Protein Homology CDS 6130 7116 . + 0 ID=cds-WP_094965652.1;Parent=gene-CCO34_RS24080;Dbxref=GenBank:WP_094965652.1;Name=WP_094965652.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=CCO34_RS24080;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_094965652.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 7135 7443 . + . ID=gene-CCO34_RS24085;Name=CCO34_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24085;old_locus_tag=CCO34_24070 NZ_NPMD01000019.1 Protein Homology CDS 7135 7443 . + 0 ID=cds-WP_001576663.1;Parent=gene-CCO34_RS24085;Dbxref=GenBank:WP_001576663.1;Name=WP_001576663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490577.1;locus_tag=CCO34_RS24085;product=hypothetical protein;protein_id=WP_001576663.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 7428 8066 . + . ID=gene-CCO34_RS24090;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=CCO34_RS24090;old_locus_tag=CCO34_24075 NZ_NPMD01000019.1 Protein Homology CDS 7428 8066 . + 0 ID=cds-WP_094965653.1;Parent=gene-CCO34_RS24090;Dbxref=GenBank:WP_094965653.1;Name=WP_094965653.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490578.1;locus_tag=CCO34_RS24090;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_094965653.1;transl_table=11 NZ_NPMD01000019.1 RefSeq pseudogene 8103 8522 . + . ID=gene-CCO34_RS24095;Name=CCO34_RS24095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS24095;old_locus_tag=CCO34_24080;pseudo=true NZ_NPMD01000019.1 Protein Homology CDS 8103 8522 . + 0 ID=cds-CCO34_RS24095;Parent=gene-CCO34_RS24095;Note=internal stop;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229397.1;locus_tag=CCO34_RS24095;product=HNH endonuclease;pseudo=true;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 8519 10345 . + . ID=gene-CCO34_RS24100;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=CCO34_RS24100;old_locus_tag=CCO34_24085 NZ_NPMD01000019.1 Protein Homology CDS 8519 10345 . + 0 ID=cds-WP_094965654.1;Parent=gene-CCO34_RS24100;Dbxref=GenBank:WP_094965654.1;Name=WP_094965654.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490579.1;locus_tag=CCO34_RS24100;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_094965654.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 10356 10571 . + . ID=gene-CCO34_RS24105;Name=trbE;gbkey=Gene;gene=trbE;gene_biotype=protein_coding;locus_tag=CCO34_RS24105;old_locus_tag=CCO34_24090 NZ_NPMD01000019.1 Protein Homology CDS 10356 10571 . + 0 ID=cds-WP_094965655.1;Parent=gene-CCO34_RS24105;Dbxref=GenBank:WP_094965655.1;Name=WP_094965655.1;gbkey=CDS;gene=trbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490580.1;locus_tag=CCO34_RS24105;product=conjugal transfer protein TrbE;protein_id=WP_094965655.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 10583 11332 . + . ID=gene-CCO34_RS24110;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=CCO34_RS24110;old_locus_tag=CCO34_24095 NZ_NPMD01000019.1 Protein Homology CDS 10583 11332 . + 0 ID=cds-WP_094965656.1;Parent=gene-CCO34_RS24110;Dbxref=GenBank:WP_094965656.1;Name=WP_094965656.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490581.1;locus_tag=CCO34_RS24110;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_094965656.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 11545 11838 . + . ID=gene-CCO34_RS24115;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=CCO34_RS24115;old_locus_tag=CCO34_24100 NZ_NPMD01000019.1 Protein Homology CDS 11545 11838 . + 0 ID=cds-WP_094965657.1;Parent=gene-CCO34_RS24115;Dbxref=GenBank:WP_094965657.1;Name=WP_094965657.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490582.1;locus_tag=CCO34_RS24115;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WP_094965657.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 11825 12373 . + . ID=gene-CCO34_RS24120;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=CCO34_RS24120;old_locus_tag=CCO34_24105 NZ_NPMD01000019.1 Protein Homology CDS 11825 12373 . + 0 ID=cds-WP_094965658.1;Parent=gene-CCO34_RS24120;Dbxref=GenBank:WP_094965658.1;Name=WP_094965658.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490583.1;locus_tag=CCO34_RS24120;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_094965658.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 12363 13745 . + . ID=gene-CCO34_RS24125;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=CCO34_RS24125;old_locus_tag=CCO34_24110 NZ_NPMD01000019.1 Protein Homology CDS 12363 13745 . + 0 ID=cds-WP_011282398.1;Parent=gene-CCO34_RS24125;Dbxref=GenBank:WP_011282398.1;Name=WP_011282398.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490584.1;locus_tag=CCO34_RS24125;product=conjugal transfer pilus assembly protein TraH;protein_id=WP_011282398.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 13742 16564 . + . ID=gene-CCO34_RS24130;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=CCO34_RS24130;old_locus_tag=CCO34_24115 NZ_NPMD01000019.1 Protein Homology CDS 13742 16564 . + 0 ID=cds-WP_094965660.1;Parent=gene-CCO34_RS24130;Dbxref=GenBank:WP_094965660.1;Name=WP_094965660.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774307.1;locus_tag=CCO34_RS24130;product=conjugal transfer mating-pair stabilization protein TraG;protein_id=WP_094965660.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 16586 17068 . + . ID=gene-CCO34_RS24135;Name=CCO34_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24135;old_locus_tag=CCO34_24120 NZ_NPMD01000019.1 Protein Homology CDS 16586 17068 . + 0 ID=cds-WP_094965662.1;Parent=gene-CCO34_RS24135;Dbxref=GenBank:WP_094965662.1;Name=WP_094965662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787664.1;locus_tag=CCO34_RS24135;product=surface exclusion protein;protein_id=WP_094965662.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 17314 18045 . + . ID=gene-CCO34_RS24140;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=CCO34_RS24140;old_locus_tag=CCO34_24125 NZ_NPMD01000019.1 Protein Homology CDS 17314 18045 . + 0 ID=cds-WP_094965664.1;Parent=gene-CCO34_RS24140;Dbxref=GenBank:WP_094965664.1;Name=WP_094965664.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=CCO34_RS24140;product=conjugal transfer complement resistance protein TraT;protein_id=WP_094965664.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 18422 20647 . + . ID=gene-CCO34_RS24145;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=CCO34_RS24145;old_locus_tag=CCO34_24130 NZ_NPMD01000019.1 Protein Homology CDS 18422 20647 . + 0 ID=cds-WP_094965665.1;Parent=gene-CCO34_RS24145;Dbxref=GenBank:WP_094965665.1;Name=WP_094965665.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490588.1;locus_tag=CCO34_RS24145;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_094965665.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 20647 25905 . + . ID=gene-CCO34_RS24150;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=CCO34_RS24150;old_locus_tag=CCO34_24135 NZ_NPMD01000019.1 Protein Homology CDS 20647 25905 . + 0 ID=cds-WP_094965666.1;Parent=gene-CCO34_RS24150;Dbxref=GenBank:WP_094965666.1;Name=WP_094965666.1;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=CCO34_RS24150;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_094965666.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 25925 26665 . + . ID=gene-CCO34_RS24155;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=CCO34_RS24155;old_locus_tag=CCO34_24140 NZ_NPMD01000019.1 Protein Homology CDS 25925 26665 . + 0 ID=cds-WP_094965668.1;Parent=gene-CCO34_RS24155;Dbxref=GenBank:WP_094965668.1;Name=WP_094965668.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490593.1;locus_tag=CCO34_RS24155;product=conjugal transfer pilus acetylase TraX;protein_id=WP_094965668.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 26720 27283 . + . ID=gene-CCO34_RS24160;Name=CCO34_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24160;old_locus_tag=CCO34_24145 NZ_NPMD01000019.1 Protein Homology CDS 26720 27283 . + 0 ID=cds-WP_080235949.1;Parent=gene-CCO34_RS24160;Dbxref=GenBank:WP_080235949.1;Name=WP_080235949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490594.1;locus_tag=CCO34_RS24160;product=fertility inhibition protein FinO;protein_id=WP_080235949.1;transl_table=11 NZ_NPMD01000019.1 RefSeq pseudogene 27400 27677 . + . ID=gene-CCO34_RS24165;Name=CCO34_RS24165;end_range=27677,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS24165;old_locus_tag=CCO34_24150;partial=true;pseudo=true NZ_NPMD01000019.1 Protein Homology CDS 27400 27677 . + 0 ID=cds-CCO34_RS24165;Parent=gene-CCO34_RS24165;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=27677,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490493.1;locus_tag=CCO34_RS24165;partial=true;product=disulfide bond formation protein DsbA;pseudo=true;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 27693 27833 . + . ID=gene-CCO34_RS24170;Name=CCO34_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24170;old_locus_tag=CCO34_24155 NZ_NPMD01000019.1 Protein Homology CDS 27693 27833 . + 0 ID=cds-WP_079964405.1;Parent=gene-CCO34_RS24170;Dbxref=GenBank:WP_079964405.1;Name=WP_079964405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001719547.1;locus_tag=CCO34_RS24170;product=disulfide bond formation protein DsbA;protein_id=WP_079964405.1;transl_table=11 NZ_NPMD01000019.1 RefSeq pseudogene 27955 28508 . + . ID=gene-CCO34_RS24175;Name=CCO34_RS24175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS24175;old_locus_tag=CCO34_24160;pseudo=true NZ_NPMD01000019.1 Protein Homology CDS 27955 28508 . + 0 ID=cds-CCO34_RS24175;Parent=gene-CCO34_RS24175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001239601.1;locus_tag=CCO34_RS24175;product=phospholipase D family protein;pseudo=true;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 28640 28885 . + . ID=gene-CCO34_RS24185;Name=CCO34_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24185;old_locus_tag=CCO34_24170 NZ_NPMD01000019.1 Protein Homology CDS 28640 28885 . + 0 ID=cds-WP_000078116.1;Parent=gene-CCO34_RS24185;Dbxref=GenBank:WP_000078116.1;Name=WP_000078116.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078117.1;locus_tag=CCO34_RS24185;product=replication regulatory protein RepA;protein_id=WP_000078116.1;transl_table=11 NZ_NPMD01000019.1 RefSeq pseudogene 28924 29073 . - . ID=gene-CCO34_RS26120;Name=CCO34_RS26120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26120;pseudo=true NZ_NPMD01000019.1 Protein Homology CDS 28924 29073 . - 0 ID=cds-CCO34_RS26120;Parent=gene-CCO34_RS26120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001584988.1;locus_tag=CCO34_RS26120;product=replication protein RepA;pseudo=true;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 29133 29210 . + . ID=gene-CCO34_RS24195;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=CCO34_RS24195;old_locus_tag=CCO34_24180 NZ_NPMD01000019.1 Protein Homology CDS 29133 29210 . + 0 ID=cds-WP_001541552.1;Parent=gene-CCO34_RS24195;Dbxref=GenBank:WP_001541552.1;Name=WP_001541552.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490497.1;locus_tag=CCO34_RS24195;product=RepA leader peptide Tap;protein_id=WP_001541552.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 29191 30072 . + . ID=gene-CCO34_RS24200;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=CCO34_RS24200;old_locus_tag=CCO34_24185 NZ_NPMD01000019.1 Protein Homology CDS 29191 30072 . + 0 ID=cds-WP_094965670.1;Parent=gene-CCO34_RS24200;Dbxref=GenBank:WP_094965670.1;Name=WP_094965670.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490498.3;locus_tag=CCO34_RS24200;product=incFII family plasmid replication initiator RepA;protein_id=WP_094965670.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 30651 30776 . + . ID=gene-CCO34_RS26070;Name=CCO34_RS26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26070 NZ_NPMD01000019.1 GeneMarkS-2+ CDS 30651 30776 . + 0 ID=cds-WP_254893364.1;Parent=gene-CCO34_RS26070;Dbxref=GenBank:WP_254893364.1;Name=WP_254893364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS26070;product=hypothetical protein;protein_id=WP_254893364.1;transl_table=11 NZ_NPMD01000019.1 RefSeq pseudogene 30875 31452 . + . ID=gene-CCO34_RS25980;Name=CCO34_RS25980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25980;old_locus_tag=CCO34_24200;pseudo=true NZ_NPMD01000019.1 Protein Homology CDS 30875 31452 . + 0 ID=cds-CCO34_RS25980;Parent=gene-CCO34_RS25980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000718782.1;locus_tag=CCO34_RS25980;product=ProQ/FINO family protein;pseudo=true;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 32448 33317 . + . ID=gene-CCO34_RS24220;Name=CCO34_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24220;old_locus_tag=CCO34_24205 NZ_NPMD01000019.1 Protein Homology CDS 32448 33317 . + 0 ID=cds-WP_140428487.1;Parent=gene-CCO34_RS24220;Dbxref=GenBank:WP_140428487.1;Name=WP_140428487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000490324.1;locus_tag=CCO34_RS24220;product=SdiA-regulated domain-containing protein;protein_id=WP_140428487.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 34745 35050 . + . ID=gene-CCO34_RS24225;Name=CCO34_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24225;old_locus_tag=CCO34_24210 NZ_NPMD01000019.1 Protein Homology CDS 34745 35050 . + 0 ID=cds-WP_044127393.1;Parent=gene-CCO34_RS24225;Dbxref=GenBank:WP_044127393.1;Name=WP_044127393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056608.1;locus_tag=CCO34_RS24225;product=adhesin biosynthesis transcription regulatory family protein;protein_id=WP_044127393.1;transl_table=11 NZ_NPMD01000019.1 RefSeq gene 35089 35583 . + . ID=gene-CCO34_RS24230;Name=CCO34_RS24230;end_range=35583,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24230;old_locus_tag=CCO34_24215;partial=true NZ_NPMD01000019.1 Protein Homology CDS 35089 35583 . + 0 ID=cds-WP_094965673.1;Parent=gene-CCO34_RS24230;Dbxref=GenBank:WP_094965673.1;Name=WP_094965673.1;end_range=35583,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350006.1;locus_tag=CCO34_RS24230;partial=true;product=fimbrial protein;protein_id=WP_094965673.1;transl_table=11 ##sequence-region NZ_NPMD01000002.1 1 689109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000002.1 RefSeq region 1 689109 . + . ID=NZ_NPMD01000002.1:1..689109;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000002.1 RefSeq gene 1 105 . + . ID=gene-CCO34_RS04100;Name=CCO34_RS04100;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO34_RS04100;old_locus_tag=CCO34_04100;partial=true;start_range=.,1 NZ_NPMD01000002.1 cmsearch rRNA 1 105 . + . ID=rna-CCO34_RS04100;Parent=gene-CCO34_RS04100;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS04100;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMD01000002.1 cmsearch exon 1 105 . + . ID=exon-CCO34_RS04100-1;Parent=rna-CCO34_RS04100;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS04100;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMD01000002.1 RefSeq gene 302 417 . + . ID=gene-CCO34_RS04105;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO34_RS04105;old_locus_tag=CCO34_04105 NZ_NPMD01000002.1 cmsearch rRNA 302 417 . + . ID=rna-CCO34_RS04105;Parent=gene-CCO34_RS04105;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS04105;product=5S ribosomal RNA NZ_NPMD01000002.1 cmsearch exon 302 417 . + . ID=exon-CCO34_RS04105-1;Parent=rna-CCO34_RS04105;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS04105;product=5S ribosomal RNA NZ_NPMD01000002.1 RefSeq gene 609 685 . + . ID=gene-CCO34_RS04110;Name=CCO34_RS04110;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS04110;old_locus_tag=CCO34_04110 NZ_NPMD01000002.1 tRNAscan-SE tRNA 609 685 . + . ID=rna-CCO34_RS04110;Parent=gene-CCO34_RS04110;anticodon=(pos:643..645);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS04110;product=tRNA-Asp NZ_NPMD01000002.1 tRNAscan-SE exon 609 685 . + . ID=exon-CCO34_RS04110-1;Parent=rna-CCO34_RS04110;anticodon=(pos:643..645);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS04110;product=tRNA-Asp NZ_NPMD01000002.1 RefSeq gene 850 1653 . + . ID=gene-CCO34_RS04115;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=CCO34_RS04115;old_locus_tag=CCO34_04115 NZ_NPMD01000002.1 Protein Homology CDS 850 1653 . + 0 ID=cds-WP_000586372.1;Parent=gene-CCO34_RS04115;Dbxref=GenBank:WP_000586372.1;Name=WP_000586372.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=CCO34_RS04115;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000586372.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 1674 2588 . - . ID=gene-CCO34_RS04120;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=CCO34_RS04120;old_locus_tag=CCO34_04120 NZ_NPMD01000002.1 Protein Homology CDS 1674 2588 . - 0 ID=cds-WP_000648534.1;Parent=gene-CCO34_RS04120;Dbxref=GenBank:WP_000648534.1;Name=WP_000648534.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=CCO34_RS04120;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648534.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 2693 3868 . + . ID=gene-CCO34_RS04125;Name=CCO34_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04125;old_locus_tag=CCO34_04125 NZ_NPMD01000002.1 Protein Homology CDS 2693 3868 . + 0 ID=cds-WP_001127538.1;Parent=gene-CCO34_RS04125;Dbxref=GenBank:WP_001127538.1;Name=WP_001127538.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=CCO34_RS04125;product=MFS transporter;protein_id=WP_001127538.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 4000 4800 . + . ID=gene-CCO34_RS04130;Name=CCO34_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04130;old_locus_tag=CCO34_04130 NZ_NPMD01000002.1 Protein Homology CDS 4000 4800 . + 0 ID=cds-WP_001230970.1;Parent=gene-CCO34_RS04130;Dbxref=GenBank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=CCO34_RS04130;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 4878 5648 . + . ID=gene-CCO34_RS04135;Name=CCO34_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04135;old_locus_tag=CCO34_04135 NZ_NPMD01000002.1 Protein Homology CDS 4878 5648 . + 0 ID=cds-WP_000207226.1;Parent=gene-CCO34_RS04135;Dbxref=GenBank:WP_000207226.1;Name=WP_000207226.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=CCO34_RS04135;product=class I SAM-dependent methyltransferase;protein_id=WP_000207226.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 5704 7071 . - . ID=gene-CCO34_RS04140;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=CCO34_RS04140;old_locus_tag=CCO34_04140 NZ_NPMD01000002.1 Protein Homology CDS 5704 7071 . - 0 ID=cds-WP_000644706.1;Parent=gene-CCO34_RS04140;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=CCO34_RS04140;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 7143 7898 . - . ID=gene-CCO34_RS04145;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=CCO34_RS04145;old_locus_tag=CCO34_04145 NZ_NPMD01000002.1 Protein Homology CDS 7143 7898 . - 0 ID=cds-WP_001052773.1;Parent=gene-CCO34_RS04145;Dbxref=GenBank:WP_001052773.1;Name=WP_001052773.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=CCO34_RS04145;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052773.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 7933 8655 . + . ID=gene-CCO34_RS04150;Name=CCO34_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04150;old_locus_tag=CCO34_04150 NZ_NPMD01000002.1 Protein Homology CDS 7933 8655 . + 0 ID=cds-WP_000801242.1;Parent=gene-CCO34_RS04150;Dbxref=GenBank:WP_000801242.1;Name=WP_000801242.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=CCO34_RS04150;product=class I SAM-dependent methyltransferase;protein_id=WP_000801242.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 8652 9119 . - . ID=gene-CCO34_RS04155;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=CCO34_RS04155;old_locus_tag=CCO34_04155 NZ_NPMD01000002.1 Protein Homology CDS 8652 9119 . - 0 ID=cds-WP_000917874.1;Parent=gene-CCO34_RS04155;Dbxref=GenBank:WP_000917874.1;Name=WP_000917874.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=CCO34_RS04155;product=ribonuclease HI;protein_id=WP_000917874.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 9183 9914 . + . ID=gene-CCO34_RS04160;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=CCO34_RS04160;old_locus_tag=CCO34_04160 NZ_NPMD01000002.1 Protein Homology CDS 9183 9914 . + 0 ID=cds-WP_001670675.1;Parent=gene-CCO34_RS04160;Dbxref=GenBank:WP_001670675.1;Name=WP_001670675.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=CCO34_RS04160;product=DNA polymerase III subunit epsilon;protein_id=WP_001670675.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 10048 10124 . + . ID=gene-CCO34_RS04165;Name=CCO34_RS04165;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS04165;old_locus_tag=CCO34_04165 NZ_NPMD01000002.1 tRNAscan-SE tRNA 10048 10124 . + . ID=rna-CCO34_RS04165;Parent=gene-CCO34_RS04165;anticodon=(pos:10082..10084);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS04165;product=tRNA-Asp NZ_NPMD01000002.1 tRNAscan-SE exon 10048 10124 . + . ID=exon-CCO34_RS04165-1;Parent=rna-CCO34_RS04165;anticodon=(pos:10082..10084);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS04165;product=tRNA-Asp NZ_NPMD01000002.1 RefSeq gene 10445 11500 . - . ID=gene-CCO34_RS04170;Name=CCO34_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04170;old_locus_tag=CCO34_04170 NZ_NPMD01000002.1 Protein Homology CDS 10445 11500 . - 0 ID=cds-WP_000367626.1;Parent=gene-CCO34_RS04170;Dbxref=GenBank:WP_000367626.1;Name=WP_000367626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=CCO34_RS04170;product=ImpA family type VI secretion system protein;protein_id=WP_000367626.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 11511 12506 . - . ID=gene-CCO34_RS04175;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=CCO34_RS04175;old_locus_tag=CCO34_04175 NZ_NPMD01000002.1 Protein Homology CDS 11511 12506 . - 0 ID=cds-WP_000145239.1;Parent=gene-CCO34_RS04175;Dbxref=GenBank:WP_000145239.1;Name=WP_000145239.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=CCO34_RS04175;product=type VI secretion system baseplate subunit TssG;protein_id=WP_000145239.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 12503 14386 . - . ID=gene-CCO34_RS04180;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=CCO34_RS04180;old_locus_tag=CCO34_04180 NZ_NPMD01000002.1 Protein Homology CDS 12503 14386 . - 0 ID=cds-WP_000371508.1;Parent=gene-CCO34_RS04180;Dbxref=GenBank:WP_000371508.1;Name=WP_000371508.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=CCO34_RS04180;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000371508.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 14402 14896 . - . ID=gene-CCO34_RS04185;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=CCO34_RS04185;old_locus_tag=CCO34_04185 NZ_NPMD01000002.1 Protein Homology CDS 14402 14896 . - 0 ID=cds-WP_000108009.1;Parent=gene-CCO34_RS04185;Dbxref=GenBank:WP_000108009.1;Name=WP_000108009.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=CCO34_RS04185;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108009.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 14893 15717 . - . ID=gene-CCO34_RS04190;Name=CCO34_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04190;old_locus_tag=CCO34_04190 NZ_NPMD01000002.1 Protein Homology CDS 14893 15717 . - 0 ID=cds-WP_080181060.1;Parent=gene-CCO34_RS04190;Dbxref=GenBank:WP_080181060.1;Name=WP_080181060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=CCO34_RS04190;product=type VI secretion system accessory protein TagJ;protein_id=WP_080181060.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 15704 16606 . - . ID=gene-CCO34_RS04195;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=CCO34_RS04195;old_locus_tag=CCO34_04195 NZ_NPMD01000002.1 Protein Homology CDS 15704 16606 . - 0 ID=cds-WP_000806679.1;Parent=gene-CCO34_RS04195;Dbxref=GenBank:WP_000806679.1;Name=WP_000806679.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=CCO34_RS04195;product=type VI secretion system-associated protein TagK;protein_id=WP_000806679.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 16974 19613 . + . ID=gene-CCO34_RS04200;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=CCO34_RS04200;old_locus_tag=CCO34_04200 NZ_NPMD01000002.1 Protein Homology CDS 16974 19613 . + 0 ID=cds-WP_000449778.1;Parent=gene-CCO34_RS04200;Dbxref=GenBank:WP_000449778.1;Name=WP_000449778.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=CCO34_RS04200;product=type VI secretion system ATPase TssH;protein_id=WP_000449778.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 19713 20255 . + . ID=gene-CCO34_RS04205;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=CCO34_RS04205;old_locus_tag=CCO34_04205 NZ_NPMD01000002.1 Protein Homology CDS 19713 20255 . + 0 ID=cds-WP_000996815.1;Parent=gene-CCO34_RS04205;Dbxref=GenBank:WP_000996815.1;Name=WP_000996815.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=CCO34_RS04205;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996815.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 20279 21787 . + . ID=gene-CCO34_RS04210;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=CCO34_RS04210;old_locus_tag=CCO34_04210 NZ_NPMD01000002.1 Protein Homology CDS 20279 21787 . + 0 ID=cds-WP_000013884.1;Parent=gene-CCO34_RS04210;Dbxref=GenBank:WP_000013884.1;Name=WP_000013884.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=CCO34_RS04210;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013884.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 21802 21960 . + . ID=gene-CCO34_RS04215;Name=CCO34_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04215;old_locus_tag=CCO34_04215 NZ_NPMD01000002.1 Protein Homology CDS 21802 21960 . + 0 ID=cds-WP_272897160.1;Parent=gene-CCO34_RS04215;Dbxref=GenBank:WP_272897160.1;Name=WP_272897160.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033857.1;locus_tag=CCO34_RS04215;product=BPSL0067 family protein;protein_id=WP_272897160.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 21973 22419 . + . ID=gene-CCO34_RS04220;Name=CCO34_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04220;old_locus_tag=CCO34_04220 NZ_NPMD01000002.1 Protein Homology CDS 21973 22419 . + 0 ID=cds-WP_020437319.1;Parent=gene-CCO34_RS04220;Dbxref=GenBank:WP_020437319.1;Name=WP_020437319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535435.1;locus_tag=CCO34_RS04220;product=STY0301 family protein;protein_id=WP_020437319.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 22673 23158 . + . ID=gene-CCO34_RS04225;Name=CCO34_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04225;old_locus_tag=CCO34_04225 NZ_NPMD01000002.1 Protein Homology CDS 22673 23158 . + 0 ID=cds-WP_000312802.1;Parent=gene-CCO34_RS04225;Dbxref=GenBank:WP_000312802.1;Name=WP_000312802.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=CCO34_RS04225;product=Hcp family type VI secretion system effector;protein_id=WP_000312802.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 23226 23418 . + . ID=gene-CCO34_RS26145;Name=CCO34_RS26145;end_range=23418,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26145;partial=true;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 23226 23418 . + 0 ID=cds-CCO34_RS26145;Parent=gene-CCO34_RS26145;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23418,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO34_RS26145;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 23461 23946 . + . ID=gene-CCO34_RS04235;Name=CCO34_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04235;old_locus_tag=CCO34_04235 NZ_NPMD01000002.1 Protein Homology CDS 23461 23946 . + 0 ID=cds-WP_001081550.1;Parent=gene-CCO34_RS04235;Dbxref=GenBank:WP_001081550.1;Name=WP_001081550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=CCO34_RS04235;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081550.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 23931 24314 . + . ID=gene-CCO34_RS04240;Name=CCO34_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04240;old_locus_tag=CCO34_04240 NZ_NPMD01000002.1 Protein Homology CDS 23931 24314 . + 0 ID=cds-WP_000379146.1;Parent=gene-CCO34_RS04240;Dbxref=GenBank:WP_000379146.1;Name=WP_000379146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=CCO34_RS04240;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379146.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 24457 24942 . + . ID=gene-CCO34_RS04245;Name=CCO34_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04245;old_locus_tag=CCO34_04245 NZ_NPMD01000002.1 Protein Homology CDS 24457 24942 . + 0 ID=cds-WP_000119443.1;Parent=gene-CCO34_RS04245;Dbxref=GenBank:WP_000119443.1;Name=WP_000119443.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=CCO34_RS04245;product=Hcp family type VI secretion system effector;protein_id=WP_000119443.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 25009 25545 . + . ID=gene-CCO34_RS04250;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=CCO34_RS04250;old_locus_tag=CCO34_04250 NZ_NPMD01000002.1 Protein Homology CDS 25009 25545 . + 0 ID=cds-WP_001007105.1;Parent=gene-CCO34_RS04250;Dbxref=GenBank:WP_001007105.1;Name=WP_001007105.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO34_RS04250;product=type VI secretion system lipoprotein TssJ;protein_id=WP_001007105.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 25549 26892 . + . ID=gene-CCO34_RS04255;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=CCO34_RS04255;old_locus_tag=CCO34_04255 NZ_NPMD01000002.1 Protein Homology CDS 25549 26892 . + 0 ID=cds-WP_000118729.1;Parent=gene-CCO34_RS04255;Dbxref=GenBank:WP_000118729.1;Name=WP_000118729.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=CCO34_RS04255;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118729.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 26889 28193 . + . ID=gene-CCO34_RS04260;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=CCO34_RS04260;old_locus_tag=CCO34_04260 NZ_NPMD01000002.1 Protein Homology CDS 26889 28193 . + 0 ID=cds-WP_000132483.1;Parent=gene-CCO34_RS04260;Dbxref=GenBank:WP_000132483.1;Name=WP_000132483.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=CCO34_RS04260;product=type VI secretion system protein TssL%2C long form;protein_id=WP_000132483.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 28198 28971 . + . ID=gene-CCO34_RS04265;Name=CCO34_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04265;old_locus_tag=CCO34_04265 NZ_NPMD01000002.1 Protein Homology CDS 28198 28971 . + 0 ID=cds-WP_000976549.1;Parent=gene-CCO34_RS04265;Dbxref=GenBank:WP_000976549.1;Name=WP_000976549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=CCO34_RS04265;product=Rap1a/Tai family immunity protein;protein_id=WP_000976549.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 29174 29605 . + . ID=gene-CCO34_RS04270;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=CCO34_RS04270;old_locus_tag=CCO34_04270 NZ_NPMD01000002.1 Protein Homology CDS 29174 29605 . + 0 ID=cds-WP_000227044.1;Parent=gene-CCO34_RS04270;Dbxref=GenBank:WP_000227044.1;Name=WP_000227044.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=CCO34_RS04270;product=Shiga-like toxin A subunit SciR;protein_id=WP_000227044.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 29639 33508 . + . ID=gene-CCO34_RS04275;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=CCO34_RS04275;old_locus_tag=CCO34_04275 NZ_NPMD01000002.1 Protein Homology CDS 29639 33508 . + 0 ID=cds-WP_094965397.1;Parent=gene-CCO34_RS04275;Dbxref=GenBank:WP_094965397.1;Name=WP_094965397.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=CCO34_RS04275;product=Type VI secretion protein IcmF;protein_id=WP_094965397.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 33508 34296 . + . ID=gene-CCO34_RS04280;Name=CCO34_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04280;old_locus_tag=CCO34_04280 NZ_NPMD01000002.1 Protein Homology CDS 33508 34296 . + 0 ID=cds-WP_064000715.1;Parent=gene-CCO34_RS04280;Dbxref=GenBank:WP_064000715.1;Name=WP_064000715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459284.1;locus_tag=CCO34_RS04280;product=TagF domain-containing protein;protein_id=WP_064000715.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 34293 34709 . + . ID=gene-CCO34_RS04285;Name=CCO34_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04285;old_locus_tag=CCO34_04285 NZ_NPMD01000002.1 Protein Homology CDS 34293 34709 . + 0 ID=cds-WP_001596567.1;Parent=gene-CCO34_RS04285;Dbxref=GenBank:WP_001596567.1;Name=WP_001596567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=CCO34_RS04285;product=DUF2195 family protein;protein_id=WP_001596567.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 34733 35254 . + . ID=gene-CCO34_RS04290;Name=CCO34_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04290;old_locus_tag=CCO34_04290 NZ_NPMD01000002.1 Protein Homology CDS 34733 35254 . + 0 ID=cds-WP_000968384.1;Parent=gene-CCO34_RS04290;Dbxref=GenBank:WP_000968384.1;Name=WP_000968384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=CCO34_RS04290;product=DUF2778 domain-containing protein;protein_id=WP_000968384.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 35651 37882 . + . ID=gene-CCO34_RS04300;Name=CCO34_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04300;old_locus_tag=CCO34_04300 NZ_NPMD01000002.1 Protein Homology CDS 35651 37882 . + 0 ID=cds-WP_094965398.1;Parent=gene-CCO34_RS04300;Dbxref=GenBank:WP_094965398.1;Name=WP_094965398.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505545.1;locus_tag=CCO34_RS04300;product=type VI secretion system Vgr family protein;protein_id=WP_094965398.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 37942 38400 . + . ID=gene-CCO34_RS04305;Name=CCO34_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04305;old_locus_tag=CCO34_04305 NZ_NPMD01000002.1 Protein Homology CDS 37942 38400 . + 0 ID=cds-WP_000186513.1;Parent=gene-CCO34_RS04305;Dbxref=GenBank:WP_000186513.1;Name=WP_000186513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186512.1;locus_tag=CCO34_RS04305;product=DcrB-related protein;protein_id=WP_000186513.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 38416 43119 . + . ID=gene-CCO34_RS25525;Name=CCO34_RS25525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25525 NZ_NPMD01000002.1 Protein Homology CDS 38416 43119 . + 0 ID=cds-WP_176452907.1;Parent=gene-CCO34_RS25525;Dbxref=GenBank:WP_176452907.1;Name=WP_176452907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503220.1;locus_tag=CCO34_RS25525;product=RHS repeat-associated core domain-containing protein;protein_id=WP_176452907.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 43094 43519 . + . ID=gene-CCO34_RS04315;Name=CCO34_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04315;old_locus_tag=CCO34_04315 NZ_NPMD01000002.1 Protein Homology CDS 43094 43519 . + 0 ID=cds-WP_001805083.1;Parent=gene-CCO34_RS04315;Dbxref=GenBank:WP_001805083.1;Name=WP_001805083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805083.1;locus_tag=CCO34_RS04315;product=hypothetical protein;protein_id=WP_001805083.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 43591 43848 . - . ID=gene-CCO34_RS04320;Name=CCO34_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04320;old_locus_tag=CCO34_04320 NZ_NPMD01000002.1 Protein Homology CDS 43591 43848 . - 0 ID=cds-WP_080091383.1;Parent=gene-CCO34_RS04320;Dbxref=GenBank:WP_080091383.1;Name=WP_080091383.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=CCO34_RS04320;product=SymE family type I addiction module toxin;protein_id=WP_080091383.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 43985 44158 . + . ID=gene-CCO34_RS26150;Name=CCO34_RS26150;end_range=44158,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26150;partial=true;pseudo=true;start_range=.,43985 NZ_NPMD01000002.1 Protein Homology CDS 43985 44158 . + 0 ID=cds-CCO34_RS26150;Parent=gene-CCO34_RS26150;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=44158,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO34_RS26150;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,43985;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 45293 45760 . + . ID=gene-CCO34_RS04335;Name=CCO34_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04335;old_locus_tag=CCO34_04335 NZ_NPMD01000002.1 Protein Homology CDS 45293 45760 . + 0 ID=cds-WP_045900899.1;Parent=gene-CCO34_RS04335;Dbxref=GenBank:WP_045900899.1;Name=WP_045900899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=CCO34_RS04335;product=sugar tyrosine-protein kinase;protein_id=WP_045900899.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 45790 45946 . + . ID=gene-CCO34_RS26155;Name=CCO34_RS26155;end_range=45946,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26155;old_locus_tag=CCO34_04340;partial=true;pseudo=true;start_range=.,45790 NZ_NPMD01000002.1 Protein Homology CDS 45790 45946 . + 0 ID=cds-CCO34_RS26155;Parent=gene-CCO34_RS26155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=45946,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238642.1;locus_tag=CCO34_RS26155;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,45790;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 46077 46355 . + . ID=gene-CCO34_RS04345;Name=CCO34_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04345;old_locus_tag=CCO34_04345 NZ_NPMD01000002.1 Protein Homology CDS 46077 46355 . + 0 ID=cds-WP_077921584.1;Parent=gene-CCO34_RS04345;Dbxref=GenBank:WP_077921584.1;Name=WP_077921584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=CCO34_RS04345;product=hypothetical protein;protein_id=WP_077921584.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 46422 46736 . - . ID=gene-CCO34_RS04350;Name=CCO34_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04350;old_locus_tag=CCO34_04350 NZ_NPMD01000002.1 Protein Homology CDS 46422 46736 . - 0 ID=cds-WP_077916130.1;Parent=gene-CCO34_RS04350;Dbxref=GenBank:WP_077916130.1;Name=WP_077916130.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=CCO34_RS04350;product=SymE family type I addiction module toxin;protein_id=WP_077916130.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 46828 46986 . + . ID=gene-CCO34_RS26160;Name=CCO34_RS26160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26160 NZ_NPMD01000002.1 Protein Homology CDS 46828 46986 . + 0 ID=cds-WP_217805114.1;Parent=gene-CCO34_RS26160;Dbxref=GenBank:WP_217805114.1;Name=WP_217805114.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=CCO34_RS26160;product=transposase;protein_id=WP_217805114.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 46920 47489 . + . ID=gene-CCO34_RS04355;Name=CCO34_RS04355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS04355;old_locus_tag=CCO34_04355;partial=true;pseudo=true;start_range=.,46920 NZ_NPMD01000002.1 Protein Homology CDS 46920 47489 . + 0 ID=cds-CCO34_RS04355;Parent=gene-CCO34_RS04355;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=CCO34_RS04355;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,46920;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 48249 48743 . + . ID=gene-CCO34_RS04360;Name=CCO34_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04360;old_locus_tag=CCO34_04360 NZ_NPMD01000002.1 Protein Homology CDS 48249 48743 . + 0 ID=cds-WP_000789624.1;Parent=gene-CCO34_RS04360;Dbxref=GenBank:WP_000789624.1;Name=WP_000789624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789624.1;locus_tag=CCO34_RS04360;product=hypothetical protein;protein_id=WP_000789624.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 48876 49373 . + . ID=gene-CCO34_RS04365;Name=CCO34_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04365;old_locus_tag=CCO34_04365 NZ_NPMD01000002.1 Protein Homology CDS 48876 49373 . + 0 ID=cds-WP_094965399.1;Parent=gene-CCO34_RS04365;Dbxref=GenBank:WP_094965399.1;Name=WP_094965399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789627.1;locus_tag=CCO34_RS04365;product=Saf-pilin pilus formation protein SafA;protein_id=WP_094965399.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 49450 50187 . + . ID=gene-CCO34_RS04370;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=CCO34_RS04370;old_locus_tag=CCO34_04370 NZ_NPMD01000002.1 Protein Homology CDS 49450 50187 . + 0 ID=cds-WP_094965414.1;Parent=gene-CCO34_RS04370;Dbxref=GenBank:WP_094965414.1;Name=WP_094965414.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=CCO34_RS04370;product=pili assembly chaperone SafB;protein_id=WP_094965414.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 50211 52721 . + . ID=gene-CCO34_RS04375;Name=CCO34_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04375;old_locus_tag=CCO34_04375 NZ_NPMD01000002.1 Protein Homology CDS 50211 52721 . + 0 ID=cds-WP_094965400.1;Parent=gene-CCO34_RS04375;Dbxref=GenBank:WP_094965400.1;Name=WP_094965400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=CCO34_RS04375;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_094965400.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 52743 53213 . + . ID=gene-CCO34_RS04380;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=CCO34_RS04380;old_locus_tag=CCO34_04380 NZ_NPMD01000002.1 Protein Homology CDS 52743 53213 . + 0 ID=cds-WP_080195877.1;Parent=gene-CCO34_RS04380;Dbxref=GenBank:WP_080195877.1;Name=WP_080195877.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=CCO34_RS04380;product=AfaD family invasin;protein_id=WP_080195877.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 53619 54440 . + . ID=gene-CCO34_RS04385;Name=CCO34_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04385;old_locus_tag=CCO34_04385 NZ_NPMD01000002.1 Protein Homology CDS 53619 54440 . + 0 ID=cds-WP_094965401.1;Parent=gene-CCO34_RS04385;Dbxref=GenBank:WP_094965401.1;Name=WP_094965401.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=CCO34_RS04385;product=polysaccharide deacetylase family protein;protein_id=WP_094965401.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 54523 54760 . + . ID=gene-CCO34_RS04390;Name=CCO34_RS04390;end_range=54760,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS04390;old_locus_tag=CCO34_04390;partial=true;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 54523 54760 . + 0 ID=cds-CCO34_RS04390;Parent=gene-CCO34_RS04390;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=54760,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=CCO34_RS04390;partial=true;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 55255 56202 . + . ID=gene-CCO34_RS04395;Name=CCO34_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04395;old_locus_tag=CCO34_04395 NZ_NPMD01000002.1 Protein Homology CDS 55255 56202 . + 0 ID=cds-WP_000970302.1;Parent=gene-CCO34_RS04395;Dbxref=GenBank:WP_000970302.1;Name=WP_000970302.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=CCO34_RS04395;product=LysR family transcriptional regulator;protein_id=WP_000970302.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 56322 56537 . + . ID=gene-CCO34_RS04400;Name=CCO34_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04400;old_locus_tag=CCO34_04400 NZ_NPMD01000002.1 Protein Homology CDS 56322 56537 . + 0 ID=cds-WP_001532956.1;Parent=gene-CCO34_RS04400;Dbxref=GenBank:WP_001532956.1;Name=WP_001532956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=CCO34_RS04400;product=hypothetical protein;protein_id=WP_001532956.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 56541 57260 . - . ID=gene-CCO34_RS04405;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=CCO34_RS04405;old_locus_tag=CCO34_04405 NZ_NPMD01000002.1 Protein Homology CDS 56541 57260 . - 0 ID=cds-WP_000787601.1;Parent=gene-CCO34_RS04405;Dbxref=GenBank:WP_000787601.1;Name=WP_000787601.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=CCO34_RS04405;product=adhesin/invasin protein PagN;protein_id=WP_000787601.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 57591 57998 . - . ID=gene-CCO34_RS04410;Name=CCO34_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04410;old_locus_tag=CCO34_04410 NZ_NPMD01000002.1 Protein Homology CDS 57591 57998 . - 0 ID=cds-WP_000788200.1;Parent=gene-CCO34_RS04410;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0061077,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=CCO34_RS04410;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 58369 59136 . - . ID=gene-CCO34_RS04415;Name=CCO34_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04415;old_locus_tag=CCO34_04415 NZ_NPMD01000002.1 Protein Homology CDS 58369 59136 . - 0 ID=cds-WP_000015789.1;Parent=gene-CCO34_RS04415;Dbxref=GenBank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=CCO34_RS04415;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 59245 61689 . - . ID=gene-CCO34_RS04420;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=CCO34_RS04420;old_locus_tag=CCO34_04420 NZ_NPMD01000002.1 Protein Homology CDS 59245 61689 . - 0 ID=cds-WP_094965402.1;Parent=gene-CCO34_RS04420;Dbxref=GenBank:WP_094965402.1;Name=WP_094965402.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=CCO34_RS04420;product=acyl-CoA dehydrogenase FadE;protein_id=WP_094965402.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 61929 62507 . + . ID=gene-CCO34_RS04425;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=CCO34_RS04425;old_locus_tag=CCO34_04425 NZ_NPMD01000002.1 Protein Homology CDS 61929 62507 . + 0 ID=cds-WP_000284051.1;Parent=gene-CCO34_RS04425;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=CCO34_RS04425;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 62720 63487 . + . ID=gene-CCO34_RS04430;Name=CCO34_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04430;old_locus_tag=CCO34_04430 NZ_NPMD01000002.1 Protein Homology CDS 62720 63487 . + 0 ID=cds-WP_000333387.1;Parent=gene-CCO34_RS04430;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=CCO34_RS04430;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 63458 64198 . - . ID=gene-CCO34_RS04435;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=CCO34_RS04435;old_locus_tag=CCO34_04435 NZ_NPMD01000002.1 Protein Homology CDS 63458 64198 . - 0 ID=cds-WP_001225658.1;Parent=gene-CCO34_RS04435;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=CCO34_RS04435;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 64448 65503 . + . ID=gene-CCO34_RS04440;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CCO34_RS04440;old_locus_tag=CCO34_04440 NZ_NPMD01000002.1 Protein Homology CDS 64448 65503 . + 0 ID=cds-WP_001226204.1;Parent=gene-CCO34_RS04440;Dbxref=GenBank:WP_001226204.1;Name=WP_001226204.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=CCO34_RS04440;product=DNA polymerase IV;protein_id=WP_001226204.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 65722 66861 . + . ID=gene-CCO34_RS04445;Name=CCO34_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04445;old_locus_tag=CCO34_04445 NZ_NPMD01000002.1 Protein Homology CDS 65722 66861 . + 0 ID=cds-WP_024156818.1;Parent=gene-CCO34_RS04445;Dbxref=GenBank:WP_024156818.1;Name=WP_024156818.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=CCO34_RS04445;product=RNA ligase RtcB family protein;protein_id=WP_024156818.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 66858 67472 . + . ID=gene-CCO34_RS04450;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=CCO34_RS04450;old_locus_tag=CCO34_04450 NZ_NPMD01000002.1 Protein Homology CDS 66858 67472 . + 0 ID=cds-WP_000602086.1;Parent=gene-CCO34_RS04450;Dbxref=GenBank:WP_000602086.1;Name=WP_000602086.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=CCO34_RS04450;product=peptide chain release factor H;protein_id=WP_000602086.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 67628 69085 . - . ID=gene-CCO34_RS04455;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=CCO34_RS04455;old_locus_tag=CCO34_04455 NZ_NPMD01000002.1 Protein Homology CDS 67628 69085 . - 0 ID=cds-WP_001292979.1;Parent=gene-CCO34_RS04455;Dbxref=GenBank:WP_001292979.1;Name=WP_001292979.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=CCO34_RS04455;product=cytosol nonspecific dipeptidase;protein_id=WP_001292979.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 69334 69792 . + . ID=gene-CCO34_RS04460;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=CCO34_RS04460;old_locus_tag=CCO34_04460 NZ_NPMD01000002.1 Protein Homology CDS 69334 69792 . + 0 ID=cds-WP_001292018.1;Parent=gene-CCO34_RS04460;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=CCO34_RS04460;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 69881 71125 . + . ID=gene-CCO34_RS04465;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=CCO34_RS04465;old_locus_tag=CCO34_04465 NZ_NPMD01000002.1 Protein Homology CDS 69881 71125 . + 0 ID=cds-WP_000189586.1;Parent=gene-CCO34_RS04465;Dbxref=GenBank:WP_000189586.1;Name=WP_000189586.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=CCO34_RS04465;product=esterase FrsA;protein_id=WP_000189586.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 71183 71584 . + . ID=gene-CCO34_RS04470;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=CCO34_RS04470;old_locus_tag=CCO34_04470 NZ_NPMD01000002.1 Protein Homology CDS 71183 71584 . + 0 ID=cds-WP_000174693.1;Parent=gene-CCO34_RS04470;Dbxref=GenBank:WP_000174693.1;Name=WP_000174693.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=CCO34_RS04470;product=sigma factor-binding protein Crl;protein_id=WP_000174693.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 71635 72687 . - . ID=gene-CCO34_RS04475;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=CCO34_RS04475;old_locus_tag=CCO34_04475 NZ_NPMD01000002.1 Protein Homology CDS 71635 72687 . - 0 ID=cds-WP_094965403.1;Parent=gene-CCO34_RS04475;Dbxref=GenBank:WP_094965403.1;Name=WP_094965403.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=CCO34_RS04475;product=phosphoporin PhoE;protein_id=WP_094965403.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 72970 74073 . + . ID=gene-CCO34_RS04480;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=CCO34_RS04480;old_locus_tag=CCO34_04480 NZ_NPMD01000002.1 Protein Homology CDS 72970 74073 . + 0 ID=cds-WP_001285275.1;Parent=gene-CCO34_RS04480;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=CCO34_RS04480;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 74085 75335 . + . ID=gene-CCO34_RS04485;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=CCO34_RS04485;old_locus_tag=CCO34_04485 NZ_NPMD01000002.1 Protein Homology CDS 74085 75335 . + 0 ID=cds-WP_000893225.1;Parent=gene-CCO34_RS04485;Dbxref=GenBank:WP_000893225.1;Name=WP_000893225.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=CCO34_RS04485;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893225.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 75451 75526 . + . ID=gene-CCO34_RS04490;Name=CCO34_RS04490;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS04490;old_locus_tag=CCO34_04490 NZ_NPMD01000002.1 tRNAscan-SE tRNA 75451 75526 . + . ID=rna-CCO34_RS04490;Parent=gene-CCO34_RS04490;anticodon=(pos:75484..75486);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS04490;product=tRNA-Thr NZ_NPMD01000002.1 tRNAscan-SE exon 75451 75526 . + . ID=exon-CCO34_RS04490-1;Parent=rna-CCO34_RS04490;anticodon=(pos:75484..75486);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS04490;product=tRNA-Thr NZ_NPMD01000002.1 RefSeq pseudogene 75690 75914 . + . ID=gene-CCO34_RS04495;Name=CCO34_RS04495;end_range=75914,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS04495;old_locus_tag=CCO34_04495;partial=true;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 75690 75914 . + 0 ID=cds-CCO34_RS04495;Parent=gene-CCO34_RS04495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=75914,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=CCO34_RS04495;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 75879 76597 . - . ID=gene-CCO34_RS04500;Name=CCO34_RS04500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS04500;old_locus_tag=CCO34_04500;partial=true;pseudo=true;start_range=.,75879 NZ_NPMD01000002.1 Protein Homology CDS 75879 76597 . - 0 ID=cds-CCO34_RS04500;Parent=gene-CCO34_RS04500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO34_RS04500;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,75879;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 76664 77029 . + . ID=gene-CCO34_RS04505;Name=CCO34_RS04505;end_range=77029,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS04505;old_locus_tag=CCO34_04505;partial=true;pseudo=true;start_range=.,76664 NZ_NPMD01000002.1 Protein Homology CDS 76664 77029 . + 0 ID=cds-CCO34_RS04505;Parent=gene-CCO34_RS04505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=77029,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=CCO34_RS04505;partial=true;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;start_range=.,76664;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 76998 77105 . + . ID=gene-CCO34_RS04510;Name=CCO34_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04510;old_locus_tag=CCO34_04510 NZ_NPMD01000002.1 Protein Homology CDS 76998 77105 . + 0 ID=cds-WP_021294037.1;Parent=gene-CCO34_RS04510;Dbxref=GenBank:WP_021294037.1;Name=WP_021294037.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.6;locus_tag=CCO34_RS04510;product=diol dehydratase reactivase ATPase-like domain-containing protein;protein_id=WP_021294037.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 77215 77538 . + . ID=gene-CCO34_RS04515;Name=CCO34_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04515;old_locus_tag=CCO34_04515 NZ_NPMD01000002.1 Protein Homology CDS 77215 77538 . + 0 ID=cds-WP_001573898.1;Parent=gene-CCO34_RS04515;Dbxref=GenBank:WP_001573898.1;Name=WP_001573898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=CCO34_RS04515;product=DUF1889 family protein;protein_id=WP_001573898.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 77880 79126 . + . ID=gene-CCO34_RS04520;Name=CCO34_RS04520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS04520;old_locus_tag=CCO34_04520;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 77880 79126 . + 0 ID=cds-CCO34_RS04520;Parent=gene-CCO34_RS04520;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=CCO34_RS04520;product=MFS transporter;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 79258 80679 . + . ID=gene-CCO34_RS04525;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CCO34_RS04525;old_locus_tag=CCO34_04525 NZ_NPMD01000002.1 Protein Homology CDS 79258 80679 . + 0 ID=cds-WP_001274861.1;Parent=gene-CCO34_RS04525;Dbxref=GenBank:WP_001274861.1;Name=WP_001274861.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=CCO34_RS04525;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001274861.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 80681 81307 . + . ID=gene-CCO34_RS04530;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CCO34_RS04530;old_locus_tag=CCO34_04530 NZ_NPMD01000002.1 Protein Homology CDS 80681 81307 . + 0 ID=cds-WP_000379346.1;Parent=gene-CCO34_RS04530;Dbxref=GenBank:WP_000379346.1;Name=WP_000379346.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=CCO34_RS04530;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000379346.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 81322 82200 . + . ID=gene-CCO34_RS04535;Name=CCO34_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04535;old_locus_tag=CCO34_04535 NZ_NPMD01000002.1 Protein Homology CDS 81322 82200 . + 0 ID=cds-WP_000780213.1;Parent=gene-CCO34_RS04535;Dbxref=GenBank:WP_000780213.1;Name=WP_000780213.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=CCO34_RS04535;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000780213.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 82200 83114 . + . ID=gene-CCO34_RS04540;Name=CCO34_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04540;old_locus_tag=CCO34_04540 NZ_NPMD01000002.1 Protein Homology CDS 82200 83114 . + 0 ID=cds-WP_000105592.1;Parent=gene-CCO34_RS04540;Dbxref=GenBank:WP_000105592.1;Name=WP_000105592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=CCO34_RS04540;product=alpha/beta fold hydrolase;protein_id=WP_000105592.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 83148 84113 . + . ID=gene-CCO34_RS04545;Name=CCO34_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04545;old_locus_tag=CCO34_04545 NZ_NPMD01000002.1 Protein Homology CDS 83148 84113 . + 0 ID=cds-WP_000859020.1;Parent=gene-CCO34_RS04545;Dbxref=GenBank:WP_000859020.1;Name=WP_000859020.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=CCO34_RS04545;product=LysR family transcriptional regulator;protein_id=WP_000859020.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 84058 84330 . - . ID=gene-CCO34_RS04550;Name=CCO34_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04550;old_locus_tag=CCO34_04550 NZ_NPMD01000002.1 Protein Homology CDS 84058 84330 . - 0 ID=cds-WP_001675688.1;Parent=gene-CCO34_RS04550;Dbxref=GenBank:WP_001675688.1;Name=WP_001675688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=CCO34_RS04550;product=hypothetical protein;protein_id=WP_001675688.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 85021 85419 . + . ID=gene-CCO34_RS04555;Name=CCO34_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04555;old_locus_tag=CCO34_04555 NZ_NPMD01000002.1 Protein Homology CDS 85021 85419 . + 0 ID=cds-WP_000766833.1;Parent=gene-CCO34_RS04555;Dbxref=GenBank:WP_000766833.1;Name=WP_000766833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=CCO34_RS04555;product=hypothetical protein;protein_id=WP_000766833.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 85466 86224 . - . ID=gene-CCO34_RS04560;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=CCO34_RS04560;old_locus_tag=CCO34_04560 NZ_NPMD01000002.1 Protein Homology CDS 85466 86224 . - 0 ID=cds-WP_001247035.1;Parent=gene-CCO34_RS04560;Dbxref=GenBank:WP_001247035.1;Name=WP_001247035.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=CCO34_RS04560;product=fimbrial biogenesis chaperone StbE;protein_id=WP_001247035.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 86190 87515 . - . ID=gene-CCO34_RS04565;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=CCO34_RS04565;old_locus_tag=CCO34_04565 NZ_NPMD01000002.1 Protein Homology CDS 86190 87515 . - 0 ID=cds-WP_023221527.1;Parent=gene-CCO34_RS04565;Dbxref=GenBank:WP_023221527.1;Name=WP_023221527.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO34_RS04565;product=fimbrial usher protein StbD;protein_id=WP_023221527.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 87520 90081 . - . ID=gene-CCO34_RS04570;Name=CCO34_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04570;old_locus_tag=CCO34_04570 NZ_NPMD01000002.1 Protein Homology CDS 87520 90081 . - 0 ID=cds-WP_000075322.1;Parent=gene-CCO34_RS04570;Dbxref=GenBank:WP_000075322.1;Name=WP_000075322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=CCO34_RS04570;product=fimbrial outer membrane usher protein;protein_id=WP_000075322.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 90065 90826 . - . ID=gene-CCO34_RS04575;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=CCO34_RS04575;old_locus_tag=CCO34_04575 NZ_NPMD01000002.1 Protein Homology CDS 90065 90826 . - 0 ID=cds-WP_000781495.1;Parent=gene-CCO34_RS04575;Dbxref=GenBank:WP_000781495.1;Name=WP_000781495.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=CCO34_RS04575;product=fimbrial biogenesis chaperone StbB;protein_id=WP_000781495.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 90888 91424 . - . ID=gene-CCO34_RS04580;Name=CCO34_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04580;old_locus_tag=CCO34_04580 NZ_NPMD01000002.1 Protein Homology CDS 90888 91424 . - 0 ID=cds-WP_000062036.1;Parent=gene-CCO34_RS04580;Dbxref=GenBank:WP_000062036.1;Name=WP_000062036.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=CCO34_RS04580;product=fimbrial protein;protein_id=WP_000062036.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 92087 92821 . + . ID=gene-CCO34_RS04590;Name=CCO34_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04590;old_locus_tag=CCO34_04590 NZ_NPMD01000002.1 Protein Homology CDS 92087 92821 . + 0 ID=cds-WP_001005858.1;Parent=gene-CCO34_RS04590;Dbxref=GenBank:WP_001005858.1;Name=WP_001005858.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=CCO34_RS04590;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001005858.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 92794 93094 . + . ID=gene-CCO34_RS04595;Name=CCO34_RS04595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS04595;old_locus_tag=CCO34_04595;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 92794 93094 . + 0 ID=cds-CCO34_RS04595;Parent=gene-CCO34_RS04595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=CCO34_RS04595;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 93594 95168 . + . ID=gene-CCO34_RS04605;Name=CCO34_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04605;old_locus_tag=CCO34_04605 NZ_NPMD01000002.1 Protein Homology CDS 93594 95168 . + 0 ID=cds-WP_000868303.1;Parent=gene-CCO34_RS04605;Dbxref=GenBank:WP_000868303.1;Name=WP_000868303.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=CCO34_RS04605;product=EAL domain-containing protein;protein_id=WP_000868303.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 95268 96011 . + . ID=gene-CCO34_RS04610;Name=CCO34_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04610;old_locus_tag=CCO34_04610 NZ_NPMD01000002.1 Protein Homology CDS 95268 96011 . + 0 ID=cds-WP_000081368.1;Parent=gene-CCO34_RS04610;Dbxref=GenBank:WP_000081368.1;Name=WP_000081368.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=CCO34_RS04610;product=transcriptional regulator;protein_id=WP_000081368.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 95984 96472 . + . ID=gene-CCO34_RS04615;Name=CCO34_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04615;old_locus_tag=CCO34_04615 NZ_NPMD01000002.1 Protein Homology CDS 95984 96472 . + 0 ID=cds-WP_000545419.1;Parent=gene-CCO34_RS04615;Dbxref=GenBank:WP_000545419.1;Name=WP_000545419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=CCO34_RS04615;product=hypothetical protein;protein_id=WP_000545419.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 96874 97398 . + . ID=gene-CCO34_RS04620;Name=CCO34_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04620;old_locus_tag=CCO34_04620 NZ_NPMD01000002.1 Protein Homology CDS 96874 97398 . + 0 ID=cds-WP_000830237.1;Parent=gene-CCO34_RS04620;Dbxref=GenBank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=CCO34_RS04620;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 97542 98183 . + . ID=gene-CCO34_RS04625;Name=CCO34_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04625;old_locus_tag=CCO34_04625 NZ_NPMD01000002.1 Protein Homology CDS 97542 98183 . + 0 ID=cds-WP_000610824.1;Parent=gene-CCO34_RS04625;Dbxref=GenBank:WP_000610824.1;Name=WP_000610824.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=CCO34_RS04625;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610824.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 98194 98418 . + . ID=gene-CCO34_RS04630;Name=CCO34_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04630;old_locus_tag=CCO34_04630 NZ_NPMD01000002.1 Protein Homology CDS 98194 98418 . + 0 ID=cds-WP_000737125.1;Parent=gene-CCO34_RS04630;Dbxref=GenBank:WP_000737125.1;Name=WP_000737125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=CCO34_RS04630;product=membrane protein;protein_id=WP_000737125.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 98476 98835 . + . ID=gene-CCO34_RS04635;Name=CCO34_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04635;old_locus_tag=CCO34_04635 NZ_NPMD01000002.1 Protein Homology CDS 98476 98835 . + 0 ID=cds-WP_000722978.1;Parent=gene-CCO34_RS04635;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=CCO34_RS04635;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 98905 100362 . - . ID=gene-CCO34_RS04640;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=CCO34_RS04640;old_locus_tag=CCO34_04640 NZ_NPMD01000002.1 Protein Homology CDS 98905 100362 . - 0 ID=cds-WP_023228798.1;Parent=gene-CCO34_RS04640;Dbxref=GenBank:WP_023228798.1;Name=WP_023228798.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=CCO34_RS04640;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_023228798.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 100379 103546 . - . ID=gene-CCO34_RS04645;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=CCO34_RS04645;old_locus_tag=CCO34_04645 NZ_NPMD01000002.1 Protein Homology CDS 100379 103546 . - 0 ID=cds-WP_000673146.1;Parent=gene-CCO34_RS04645;Dbxref=GenBank:WP_000673146.1;Name=WP_000673146.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=CCO34_RS04645;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_000673146.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 103543 104769 . - . ID=gene-CCO34_RS04650;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=CCO34_RS04650;old_locus_tag=CCO34_04650 NZ_NPMD01000002.1 Protein Homology CDS 103543 104769 . - 0 ID=cds-WP_094965404.1;Parent=gene-CCO34_RS04650;Dbxref=GenBank:WP_094965404.1;Name=WP_094965404.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=CCO34_RS04650;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_094965404.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 105046 107334 . + . ID=gene-CCO34_RS04655;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=CCO34_RS04655;old_locus_tag=CCO34_04655 NZ_NPMD01000002.1 Protein Homology CDS 105046 107334 . + 0 ID=cds-WP_000083323.1;Parent=gene-CCO34_RS04655;Dbxref=GenBank:WP_000083323.1;Name=WP_000083323.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=CCO34_RS04655;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_000083323.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 107346 107810 . + . ID=gene-CCO34_RS04660;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=CCO34_RS04660;old_locus_tag=CCO34_04660 NZ_NPMD01000002.1 Protein Homology CDS 107346 107810 . + 0 ID=cds-WP_001020584.1;Parent=gene-CCO34_RS04660;Dbxref=GenBank:WP_001020584.1;Name=WP_001020584.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=CCO34_RS04660;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020584.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 107888 108082 . + . ID=gene-CCO34_RS04665;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=CCO34_RS04665;old_locus_tag=CCO34_04665 NZ_NPMD01000002.1 Protein Homology CDS 107888 108082 . + 0 ID=cds-WP_001159470.1;Parent=gene-CCO34_RS04665;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=CCO34_RS04665;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 108375 109628 . + . ID=gene-CCO34_RS04670;Name=CCO34_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04670;old_locus_tag=CCO34_04670 NZ_NPMD01000002.1 Protein Homology CDS 108375 109628 . + 0 ID=cds-WP_000288502.1;Parent=gene-CCO34_RS04670;Dbxref=GenBank:WP_000288502.1;Name=WP_000288502.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=CCO34_RS04670;product=MFS transporter;protein_id=WP_000288502.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 109817 111775 . + . ID=gene-CCO34_RS04675;Name=CCO34_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04675;old_locus_tag=CCO34_04675 NZ_NPMD01000002.1 Protein Homology CDS 109817 111775 . + 0 ID=cds-WP_000910353.1;Parent=gene-CCO34_RS04675;Dbxref=GenBank:WP_000910353.1;Name=WP_000910353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=CCO34_RS04675;product=site-specific DNA-methyltransferase;protein_id=WP_000910353.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 111785 114757 . + . ID=gene-CCO34_RS04680;Name=CCO34_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04680;old_locus_tag=CCO34_04680 NZ_NPMD01000002.1 Protein Homology CDS 111785 114757 . + 0 ID=cds-WP_077906050.1;Parent=gene-CCO34_RS04680;Dbxref=GenBank:WP_077906050.1;Name=WP_077906050.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=CCO34_RS04680;product=type III restriction-modification system endonuclease;protein_id=WP_077906050.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 115034 115135 . + . ID=gene-CCO34_RS04685;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=CCO34_RS04685;old_locus_tag=CCO34_04685 NZ_NPMD01000002.1 Protein Homology CDS 115034 115135 . + 0 ID=cds-WP_000934834.1;Parent=gene-CCO34_RS04685;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=CCO34_RS04685;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 115252 116655 . + . ID=gene-CCO34_RS04690;Name=CCO34_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04690;old_locus_tag=CCO34_04690 NZ_NPMD01000002.1 Protein Homology CDS 115252 116655 . + 0 ID=cds-WP_000393709.1;Parent=gene-CCO34_RS04690;Dbxref=GenBank:WP_000393709.1;Name=WP_000393709.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=CCO34_RS04690;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393709.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 116652 117662 . + . ID=gene-CCO34_RS04695;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO34_RS04695;old_locus_tag=CCO34_04695 NZ_NPMD01000002.1 Protein Homology CDS 116652 117662 . + 0 ID=cds-WP_000151045.1;Parent=gene-CCO34_RS04695;Dbxref=GenBank:WP_000151045.1;Name=WP_000151045.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=CCO34_RS04695;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151045.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 117608 117793 . + . ID=gene-CCO34_RS04700;Name=CCO34_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04700;old_locus_tag=CCO34_04700 NZ_NPMD01000002.1 Protein Homology CDS 117608 117793 . + 0 ID=cds-WP_306292668.1;Parent=gene-CCO34_RS04700;Dbxref=GenBank:WP_306292668.1;Name=WP_306292668.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=CCO34_RS04700;product=DUF2474 domain-containing protein;protein_id=WP_306292668.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 117712 117904 . + . ID=gene-CCO34_RS26085;Name=CCO34_RS26085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26085;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 117712 117904 . + 0 ID=cds-CCO34_RS26085;Parent=gene-CCO34_RS26085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=CCO34_RS26085;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 118000 119004 . + . ID=gene-CCO34_RS04705;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=CCO34_RS04705;old_locus_tag=CCO34_04705 NZ_NPMD01000002.1 Protein Homology CDS 118000 119004 . + 0 ID=cds-WP_000074605.1;Parent=gene-CCO34_RS04705;Dbxref=GenBank:WP_000074605.1;Name=WP_000074605.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=CCO34_RS04705;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074605.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 119150 121258 . + . ID=gene-CCO34_RS04710;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=CCO34_RS04710;old_locus_tag=CCO34_04710 NZ_NPMD01000002.1 Protein Homology CDS 119150 121258 . + 0 ID=cds-WP_001127731.1;Parent=gene-CCO34_RS04710;Dbxref=GenBank:WP_001127731.1;Name=WP_001127731.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=CCO34_RS04710;product=ferrioxamine B receptor FoxA;protein_id=WP_001127731.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 121299 121931 . - . ID=gene-CCO34_RS04715;Name=CCO34_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04715;old_locus_tag=CCO34_04715 NZ_NPMD01000002.1 Protein Homology CDS 121299 121931 . - 0 ID=cds-WP_000433131.1;Parent=gene-CCO34_RS04715;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=CCO34_RS04715;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 122163 122438 . + . ID=gene-CCO34_RS04720;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=CCO34_RS04720;old_locus_tag=CCO34_04720 NZ_NPMD01000002.1 Protein Homology CDS 122163 122438 . + 0 ID=cds-WP_000848026.1;Parent=gene-CCO34_RS04720;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=CCO34_RS04720;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 122574 124199 . - . ID=gene-CCO34_RS04725;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=CCO34_RS04725;old_locus_tag=CCO34_04725 NZ_NPMD01000002.1 Protein Homology CDS 122574 124199 . - 0 ID=cds-WP_000205268.1;Parent=gene-CCO34_RS04725;Dbxref=GenBank:WP_000205268.1;Name=WP_000205268.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=CCO34_RS04725;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000205268.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 124465 125352 . + . ID=gene-CCO34_RS04730;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=CCO34_RS04730;old_locus_tag=CCO34_04730 NZ_NPMD01000002.1 Protein Homology CDS 124465 125352 . + 0 ID=cds-WP_000052223.1;Parent=gene-CCO34_RS04730;Dbxref=GenBank:WP_000052223.1;Name=WP_000052223.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=CCO34_RS04730;product=methylisocitrate lyase;protein_id=WP_000052223.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 125475 126644 . + . ID=gene-CCO34_RS04735;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=CCO34_RS04735;old_locus_tag=CCO34_04735 NZ_NPMD01000002.1 Protein Homology CDS 125475 126644 . + 0 ID=cds-WP_000132748.1;Parent=gene-CCO34_RS04735;Dbxref=GenBank:WP_000132748.1;Name=WP_000132748.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=CCO34_RS04735;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_000132748.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 126682 128133 . + . ID=gene-CCO34_RS04740;Name=CCO34_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04740;old_locus_tag=CCO34_04740 NZ_NPMD01000002.1 Protein Homology CDS 126682 128133 . + 0 ID=cds-WP_001272706.1;Parent=gene-CCO34_RS04740;Dbxref=GenBank:WP_001272706.1;Name=WP_001272706.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=CCO34_RS04740;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_001272706.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 128174 130060 . + . ID=gene-CCO34_RS04745;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=CCO34_RS04745;old_locus_tag=CCO34_04745 NZ_NPMD01000002.1 Protein Homology CDS 128174 130060 . + 0 ID=cds-WP_000010210.1;Parent=gene-CCO34_RS04745;Dbxref=GenBank:WP_000010210.1;Name=WP_000010210.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=CCO34_RS04745;product=propionate--CoA ligase;protein_id=WP_000010210.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 130167 131141 . - . ID=gene-CCO34_RS04750;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CCO34_RS04750;old_locus_tag=CCO34_04750 NZ_NPMD01000002.1 Protein Homology CDS 130167 131141 . - 0 ID=cds-WP_000130725.1;Parent=gene-CCO34_RS04750;Dbxref=GenBank:WP_000130725.1;Name=WP_000130725.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=CCO34_RS04750;product=porphobilinogen synthase;protein_id=WP_000130725.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 131654 134590 . + . ID=gene-CCO34_RS04755;Name=CCO34_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04755;old_locus_tag=CCO34_04755 NZ_NPMD01000002.1 Protein Homology CDS 131654 134590 . + 0 ID=cds-WP_000556518.1;Parent=gene-CCO34_RS04755;Dbxref=GenBank:WP_000556518.1;Name=WP_000556518.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=CCO34_RS04755;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000556518.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 134676 135299 . + . ID=gene-CCO34_RS04760;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=CCO34_RS04760;old_locus_tag=CCO34_04760 NZ_NPMD01000002.1 Protein Homology CDS 134676 135299 . + 0 ID=cds-WP_000950242.1;Parent=gene-CCO34_RS04760;Dbxref=GenBank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=CCO34_RS04760;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 135344 136501 . - . ID=gene-CCO34_RS04765;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=CCO34_RS04765;old_locus_tag=CCO34_04765 NZ_NPMD01000002.1 Protein Homology CDS 135344 136501 . - 0 ID=cds-WP_000830776.1;Parent=gene-CCO34_RS04765;Dbxref=GenBank:WP_000830776.1;Name=WP_000830776.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=CCO34_RS04765;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830776.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 136848 138068 . + . ID=gene-CCO34_RS04775;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=CCO34_RS04775;old_locus_tag=CCO34_04775 NZ_NPMD01000002.1 Protein Homology CDS 136848 138068 . + 0 ID=cds-WP_000477024.1;Parent=gene-CCO34_RS04775;Dbxref=GenBank:WP_000477024.1;Name=WP_000477024.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=CCO34_RS04775;product=peptide antibiotic transporter SbmA;protein_id=WP_000477024.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 138083 139177 . + . ID=gene-CCO34_RS04780;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=CCO34_RS04780;old_locus_tag=CCO34_04780 NZ_NPMD01000002.1 Protein Homology CDS 138083 139177 . + 0 ID=cds-WP_001271421.1;Parent=gene-CCO34_RS04780;Dbxref=GenBank:WP_001271421.1;Name=WP_001271421.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=CCO34_RS04780;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271421.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 139215 139523 . - . ID=gene-CCO34_RS04785;Name=CCO34_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04785;old_locus_tag=CCO34_04785 NZ_NPMD01000002.1 Protein Homology CDS 139215 139523 . - 0 ID=cds-WP_000763139.1;Parent=gene-CCO34_RS04785;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=CCO34_RS04785;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 139791 140006 . + . ID=gene-CCO34_RS04790;Name=CCO34_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04790;old_locus_tag=CCO34_04790 NZ_NPMD01000002.1 Protein Homology CDS 139791 140006 . + 0 ID=cds-WP_001239242.1;Parent=gene-CCO34_RS04790;Dbxref=GenBank:WP_001239242.1;Name=WP_001239242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=CCO34_RS04790;product=DUF2754 family protein;protein_id=WP_001239242.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 140032 141126 . - . ID=gene-CCO34_RS04795;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=CCO34_RS04795;old_locus_tag=CCO34_04795 NZ_NPMD01000002.1 Protein Homology CDS 140032 141126 . - 0 ID=cds-WP_001096588.1;Parent=gene-CCO34_RS04795;Dbxref=GenBank:WP_001096588.1;Name=WP_001096588.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=CCO34_RS04795;product=D-alanine--D-alanine ligase;protein_id=WP_001096588.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 141204 141917 . + . ID=gene-CCO34_RS04800;Name=CCO34_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04800;old_locus_tag=CCO34_04800 NZ_NPMD01000002.1 Protein Homology CDS 141204 141917 . + 0 ID=cds-WP_000480787.1;Parent=gene-CCO34_RS04800;Dbxref=GenBank:WP_000480787.1;Name=WP_000480787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=CCO34_RS04800;product=extensin family protein;protein_id=WP_000480787.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 142086 143297 . + . ID=gene-CCO34_RS04805;Name=CCO34_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04805;old_locus_tag=CCO34_04805 NZ_NPMD01000002.1 Protein Homology CDS 142086 143297 . + 0 ID=cds-WP_000446764.1;Parent=gene-CCO34_RS04805;Dbxref=GenBank:WP_000446764.1;Name=WP_000446764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=CCO34_RS04805;product=multidrug efflux MFS transporter;protein_id=WP_000446764.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 143594 143854 . + . ID=gene-CCO34_RS04810;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=CCO34_RS04810;old_locus_tag=CCO34_04810 NZ_NPMD01000002.1 Protein Homology CDS 143594 143854 . + 0 ID=cds-WP_001518423.1;Parent=gene-CCO34_RS04810;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=CCO34_RS04810;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 144203 144523 . + . ID=gene-CCO34_RS04815;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=CCO34_RS04815;old_locus_tag=CCO34_04815 NZ_NPMD01000002.1 Protein Homology CDS 144203 144523 . + 0 ID=cds-WP_000705165.1;Parent=gene-CCO34_RS04815;Dbxref=GenBank:WP_000705165.1;Name=WP_000705165.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=CCO34_RS04815;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705165.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 144615 145727 . + . ID=gene-CCO34_RS04820;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=CCO34_RS04820;old_locus_tag=CCO34_04820 NZ_NPMD01000002.1 Protein Homology CDS 144615 145727 . + 0 ID=cds-WP_000484083.1;Parent=gene-CCO34_RS04820;Dbxref=GenBank:WP_000484083.1;Name=WP_000484083.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=CCO34_RS04820;product=diguanylate cyclase AdrA;protein_id=WP_000484083.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 145742 146551 . - . ID=gene-CCO34_RS04825;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CCO34_RS04825;old_locus_tag=CCO34_04825 NZ_NPMD01000002.1 Protein Homology CDS 145742 146551 . - 0 ID=cds-WP_000412193.1;Parent=gene-CCO34_RS04825;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=CCO34_RS04825;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 146691 147146 . + . ID=gene-CCO34_RS04830;Name=CCO34_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04830;old_locus_tag=CCO34_04830 NZ_NPMD01000002.1 Protein Homology CDS 146691 147146 . + 0 ID=cds-WP_000158137.1;Parent=gene-CCO34_RS04830;Dbxref=GenBank:WP_000158137.1;Name=WP_000158137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=CCO34_RS04830;product=YaiI/YqxD family protein;protein_id=WP_000158137.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 147331 147876 . + . ID=gene-CCO34_RS04835;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=CCO34_RS04835;old_locus_tag=CCO34_04835 NZ_NPMD01000002.1 Protein Homology CDS 147331 147876 . + 0 ID=cds-WP_000983569.1;Parent=gene-CCO34_RS04835;Dbxref=GenBank:WP_000983569.1;Name=WP_000983569.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=CCO34_RS04835;product=shikimate kinase AroL;protein_id=WP_000983569.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 147903 148094 . + . ID=gene-CCO34_RS04840;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=CCO34_RS04840;old_locus_tag=CCO34_04840 NZ_NPMD01000002.1 Protein Homology CDS 147903 148094 . + 0 ID=cds-WP_001143161.1;Parent=gene-CCO34_RS04840;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=CCO34_RS04840;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 148345 149022 . + . ID=gene-CCO34_RS04845;Name=CCO34_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04845;old_locus_tag=CCO34_04845 NZ_NPMD01000002.1 Protein Homology CDS 148345 149022 . + 0 ID=cds-WP_001276437.1;Parent=gene-CCO34_RS04845;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=CCO34_RS04845;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 149093 149377 . + . ID=gene-CCO34_RS04850;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=CCO34_RS04850;old_locus_tag=CCO34_04850 NZ_NPMD01000002.1 Protein Homology CDS 149093 149377 . + 0 ID=cds-WP_000941953.1;Parent=gene-CCO34_RS04850;Dbxref=GenBank:WP_000941953.1;Name=WP_000941953.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=CCO34_RS04850;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941953.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 149420 150331 . - . ID=gene-CCO34_RS04855;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=CCO34_RS04855;old_locus_tag=CCO34_04855 NZ_NPMD01000002.1 Protein Homology CDS 149420 150331 . - 0 ID=cds-WP_000964305.1;Parent=gene-CCO34_RS04855;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=CCO34_RS04855;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 150457 151365 . + . ID=gene-CCO34_RS04860;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=CCO34_RS04860;old_locus_tag=CCO34_04860 NZ_NPMD01000002.1 Protein Homology CDS 150457 151365 . + 0 ID=cds-WP_001219270.1;Parent=gene-CCO34_RS04860;Dbxref=GenBank:WP_001219270.1;Name=WP_001219270.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=CCO34_RS04860;product=fructokinase;protein_id=WP_001219270.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 151387 152559 . - . ID=gene-CCO34_RS04865;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=CCO34_RS04865;old_locus_tag=CCO34_04865 NZ_NPMD01000002.1 Protein Homology CDS 151387 152559 . - 0 ID=cds-WP_000755630.1;Parent=gene-CCO34_RS04865;Dbxref=GenBank:WP_000755630.1;Name=WP_000755630.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=CCO34_RS04865;product=MFS transporter AraJ;protein_id=WP_000755630.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 152732 155872 . - . ID=gene-CCO34_RS04870;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CCO34_RS04870;old_locus_tag=CCO34_04870 NZ_NPMD01000002.1 Protein Homology CDS 152732 155872 . - 0 ID=cds-WP_001535487.1;Parent=gene-CCO34_RS04870;Dbxref=GenBank:WP_001535487.1;Name=WP_001535487.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=CCO34_RS04870;product=exonuclease subunit SbcC;protein_id=WP_001535487.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 155869 157071 . - . ID=gene-CCO34_RS04875;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CCO34_RS04875;old_locus_tag=CCO34_04875 NZ_NPMD01000002.1 Protein Homology CDS 155869 157071 . - 0 ID=cds-WP_001221269.1;Parent=gene-CCO34_RS04875;Dbxref=GenBank:WP_001221269.1;Name=WP_001221269.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=CCO34_RS04875;product=exonuclease subunit SbcD;protein_id=WP_001221269.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 157285 157974 . + . ID=gene-CCO34_RS04880;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=CCO34_RS04880;old_locus_tag=CCO34_04880 NZ_NPMD01000002.1 Protein Homology CDS 157285 157974 . + 0 ID=cds-WP_000113921.1;Parent=gene-CCO34_RS04880;Dbxref=GenBank:WP_000113921.1;Name=WP_000113921.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=CCO34_RS04880;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113921.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 158044 159339 . + . ID=gene-CCO34_RS04885;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=CCO34_RS04885;old_locus_tag=CCO34_04885 NZ_NPMD01000002.1 Protein Homology CDS 158044 159339 . + 0 ID=cds-WP_000893642.1;Parent=gene-CCO34_RS04885;Dbxref=GenBank:WP_000893642.1;Name=WP_000893642.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=CCO34_RS04885;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893642.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 159748 161067 . + . ID=gene-CCO34_RS04890;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=CCO34_RS04890;old_locus_tag=CCO34_04890 NZ_NPMD01000002.1 Protein Homology CDS 159748 161067 . + 0 ID=cds-WP_000149625.1;Parent=gene-CCO34_RS04890;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=CCO34_RS04890;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 161142 162512 . + . ID=gene-CCO34_RS04895;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=CCO34_RS04895;old_locus_tag=CCO34_04895 NZ_NPMD01000002.1 Protein Homology CDS 161142 162512 . + 0 ID=cds-WP_000445556.1;Parent=gene-CCO34_RS04895;Dbxref=GenBank:WP_000445556.1;Name=WP_000445556.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=CCO34_RS04895;product=proline-specific permease ProY;protein_id=WP_000445556.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 162674 164491 . + . ID=gene-CCO34_RS04900;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=CCO34_RS04900;old_locus_tag=CCO34_04900 NZ_NPMD01000002.1 Protein Homology CDS 162674 164491 . + 0 ID=cds-WP_000930697.1;Parent=gene-CCO34_RS04900;Dbxref=GenBank:WP_000930697.1;Name=WP_000930697.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=CCO34_RS04900;product=maltodextrin glucosidase;protein_id=WP_000930697.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 164563 165165 . - . ID=gene-CCO34_RS04905;Name=CCO34_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04905;old_locus_tag=CCO34_04905 NZ_NPMD01000002.1 Protein Homology CDS 164563 165165 . - 0 ID=cds-WP_000244731.1;Parent=gene-CCO34_RS04905;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=CCO34_RS04905;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 165375 165956 . - . ID=gene-CCO34_RS04910;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=CCO34_RS04910;old_locus_tag=CCO34_04910 NZ_NPMD01000002.1 Protein Homology CDS 165375 165956 . - 0 ID=cds-WP_001009858.1;Parent=gene-CCO34_RS04910;Dbxref=GenBank:WP_001009858.1;Name=WP_001009858.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=CCO34_RS04910;product=ACP phosphodiesterase;protein_id=WP_001009858.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 166050 167114 . + . ID=gene-CCO34_RS04915;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CCO34_RS04915;old_locus_tag=CCO34_04915 NZ_NPMD01000002.1 Protein Homology CDS 166050 167114 . + 0 ID=cds-WP_001266526.1;Parent=gene-CCO34_RS04915;Dbxref=GenBank:WP_001266526.1;Name=WP_001266526.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=CCO34_RS04915;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266526.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 167311 168438 . + . ID=gene-CCO34_RS04925;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CCO34_RS04925;old_locus_tag=CCO34_04925 NZ_NPMD01000002.1 Protein Homology CDS 167311 168438 . + 0 ID=cds-WP_000667305.1;Parent=gene-CCO34_RS04925;Dbxref=GenBank:WP_000667305.1;Name=WP_000667305.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=CCO34_RS04925;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667305.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 168461 168793 . + . ID=gene-CCO34_RS04930;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CCO34_RS04930;old_locus_tag=CCO34_04930 NZ_NPMD01000002.1 Protein Homology CDS 168461 168793 . + 0 ID=cds-WP_000007628.1;Parent=gene-CCO34_RS04930;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=CCO34_RS04930;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 168821 170668 . + . ID=gene-CCO34_RS04935;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=CCO34_RS04935;old_locus_tag=CCO34_04935 NZ_NPMD01000002.1 Protein Homology CDS 168821 170668 . + 0 ID=cds-WP_000934808.1;Parent=gene-CCO34_RS04935;Dbxref=GenBank:WP_000934808.1;Name=WP_000934808.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=CCO34_RS04935;product=protein translocase subunit SecD;protein_id=WP_000934808.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 170679 171650 . + . ID=gene-CCO34_RS04940;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=CCO34_RS04940;old_locus_tag=CCO34_04940 NZ_NPMD01000002.1 Protein Homology CDS 170679 171650 . + 0 ID=cds-WP_000046629.1;Parent=gene-CCO34_RS04940;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=CCO34_RS04940;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 171795 172160 . + . ID=gene-CCO34_RS04945;Name=CCO34_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04945;old_locus_tag=CCO34_04945 NZ_NPMD01000002.1 Protein Homology CDS 171795 172160 . + 0 ID=cds-WP_000793035.1;Parent=gene-CCO34_RS04945;Dbxref=GenBank:WP_000793035.1;Name=WP_000793035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=CCO34_RS04945;product=VOC family protein;protein_id=WP_000793035.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 172186 172878 . + . ID=gene-CCO34_RS04950;Name=CCO34_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04950;old_locus_tag=CCO34_04950 NZ_NPMD01000002.1 Protein Homology CDS 172186 172878 . + 0 ID=cds-WP_000198318.1;Parent=gene-CCO34_RS04950;Dbxref=GenBank:WP_000198318.1;Name=WP_000198318.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=CCO34_RS04950;product=helix-turn-helix transcriptional regulator;protein_id=WP_000198318.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 173048 173395 . + . ID=gene-CCO34_RS04955;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=CCO34_RS04955;old_locus_tag=CCO34_04955 NZ_NPMD01000002.1 Protein Homology CDS 173048 173395 . + 0 ID=cds-WP_000974818.1;Parent=gene-CCO34_RS04955;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=CCO34_RS04955;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 173833 173940 . + . ID=gene-CCO34_RS25235;Name=CCO34_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25235 NZ_NPMD01000002.1 Protein Homology CDS 173833 173940 . + 0 ID=cds-WP_000176312.1;Parent=gene-CCO34_RS25235;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=CCO34_RS25235;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 174024 174887 . - . ID=gene-CCO34_RS04970;Name=CCO34_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04970;old_locus_tag=CCO34_04970 NZ_NPMD01000002.1 Protein Homology CDS 174024 174887 . - 0 ID=cds-WP_000752021.1;Parent=gene-CCO34_RS04970;Dbxref=GenBank:WP_000752021.1;Name=WP_000752021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=CCO34_RS04970;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 175187 175726 . - . ID=gene-CCO34_RS04975;Name=CCO34_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS04975;old_locus_tag=CCO34_04975 NZ_NPMD01000002.1 Protein Homology CDS 175187 175726 . - 0 ID=cds-WP_000198484.1;Parent=gene-CCO34_RS04975;Dbxref=GenBank:WP_000198484.1;Name=WP_000198484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=CCO34_RS04975;product=DUF3251 domain-containing protein;protein_id=WP_000198484.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 175878 176327 . + . ID=gene-CCO34_RS04980;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CCO34_RS04980;old_locus_tag=CCO34_04980 NZ_NPMD01000002.1 Protein Homology CDS 175878 176327 . + 0 ID=cds-WP_000543533.1;Parent=gene-CCO34_RS04980;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=CCO34_RS04980;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 176331 177434 . + . ID=gene-CCO34_RS04985;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CCO34_RS04985;old_locus_tag=CCO34_04985 NZ_NPMD01000002.1 Protein Homology CDS 176331 177434 . + 0 ID=cds-WP_001150217.1;Parent=gene-CCO34_RS04985;Dbxref=GenBank:WP_001150217.1;Name=WP_001150217.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=CCO34_RS04985;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150217.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 177523 177993 . + . ID=gene-CCO34_RS04990;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=CCO34_RS04990;old_locus_tag=CCO34_04990 NZ_NPMD01000002.1 Protein Homology CDS 177523 177993 . + 0 ID=cds-WP_001021372.1;Parent=gene-CCO34_RS04990;Dbxref=GenBank:WP_001021372.1;Name=WP_001021372.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=CCO34_RS04990;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021372.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 178014 178433 . + . ID=gene-CCO34_RS04995;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CCO34_RS04995;old_locus_tag=CCO34_04995 NZ_NPMD01000002.1 Protein Homology CDS 178014 178433 . + 0 ID=cds-WP_000801129.1;Parent=gene-CCO34_RS04995;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=CCO34_RS04995;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 178512 179492 . + . ID=gene-CCO34_RS05000;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=CCO34_RS05000;old_locus_tag=CCO34_05000 NZ_NPMD01000002.1 Protein Homology CDS 178512 179492 . + 0 ID=cds-WP_000752134.1;Parent=gene-CCO34_RS05000;Dbxref=GenBank:WP_000752134.1;Name=WP_000752134.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=CCO34_RS05000;product=thiamine-phosphate kinase;protein_id=WP_000752134.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 179470 179985 . + . ID=gene-CCO34_RS05005;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=CCO34_RS05005;old_locus_tag=CCO34_05005 NZ_NPMD01000002.1 Protein Homology CDS 179470 179985 . + 0 ID=cds-WP_000154063.1;Parent=gene-CCO34_RS05005;Dbxref=GenBank:WP_000154063.1;Name=WP_000154063.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=CCO34_RS05005;product=phosphatidylglycerophosphatase A;protein_id=WP_000154063.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 180089 181063 . - . ID=gene-CCO34_RS05010;Name=CCO34_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05010;old_locus_tag=CCO34_05010 NZ_NPMD01000002.1 Protein Homology CDS 180089 181063 . - 0 ID=cds-WP_001199870.1;Parent=gene-CCO34_RS05010;Dbxref=GenBank:WP_001199870.1;Name=WP_001199870.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=CCO34_RS05010;product=aldo/keto reductase;protein_id=WP_001199870.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 181120 182982 . - . ID=gene-CCO34_RS05015;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CCO34_RS05015;old_locus_tag=CCO34_05015 NZ_NPMD01000002.1 Protein Homology CDS 181120 182982 . - 0 ID=cds-WP_000006777.1;Parent=gene-CCO34_RS05015;Dbxref=GenBank:WP_000006777.1;Name=WP_000006777.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=CCO34_RS05015;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006777.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 183006 183905 . - . ID=gene-CCO34_RS05020;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=CCO34_RS05020;old_locus_tag=CCO34_05020 NZ_NPMD01000002.1 Protein Homology CDS 183006 183905 . - 0 ID=cds-WP_000348074.1;Parent=gene-CCO34_RS05020;Dbxref=GenBank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=CCO34_RS05020;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 183906 184148 . - . ID=gene-CCO34_RS05025;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=CCO34_RS05025;old_locus_tag=CCO34_05025 NZ_NPMD01000002.1 Protein Homology CDS 183906 184148 . - 0 ID=cds-WP_001124944.1;Parent=gene-CCO34_RS05025;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=CCO34_RS05025;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 184358 185806 . + . ID=gene-CCO34_RS05030;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CCO34_RS05030;old_locus_tag=CCO34_05030 NZ_NPMD01000002.1 Protein Homology CDS 184358 185806 . + 0 ID=cds-WP_000668652.1;Parent=gene-CCO34_RS05030;Dbxref=GenBank:WP_000668652.1;Name=WP_000668652.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=CCO34_RS05030;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668652.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 185850 186647 . - . ID=gene-CCO34_RS05035;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=CCO34_RS05035;old_locus_tag=CCO34_05035 NZ_NPMD01000002.1 Protein Homology CDS 185850 186647 . - 0 ID=cds-WP_000909793.1;Parent=gene-CCO34_RS05035;Dbxref=GenBank:WP_000909793.1;Name=WP_000909793.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=CCO34_RS05035;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909793.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 186650 187510 . - . ID=gene-CCO34_RS05040;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=CCO34_RS05040;old_locus_tag=CCO34_05040 NZ_NPMD01000002.1 Protein Homology CDS 186650 187510 . - 0 ID=cds-WP_000052713.1;Parent=gene-CCO34_RS05040;Dbxref=GenBank:WP_000052713.1;Name=WP_000052713.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=CCO34_RS05040;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_000052713.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 187513 188622 . - . ID=gene-CCO34_RS05045;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=CCO34_RS05045;old_locus_tag=CCO34_05045 NZ_NPMD01000002.1 Protein Homology CDS 187513 188622 . - 0 ID=cds-WP_000928801.1;Parent=gene-CCO34_RS05045;Dbxref=GenBank:WP_000928801.1;Name=WP_000928801.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=CCO34_RS05045;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_000928801.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 188628 189641 . - . ID=gene-CCO34_RS05050;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=CCO34_RS05050;old_locus_tag=CCO34_05050 NZ_NPMD01000002.1 Protein Homology CDS 188628 189641 . - 0 ID=cds-WP_000778008.1;Parent=gene-CCO34_RS05050;Dbxref=GenBank:WP_000778008.1;Name=WP_000778008.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=CCO34_RS05050;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_000778008.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 189839 190558 . - . ID=gene-CCO34_RS05055;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=CCO34_RS05055;old_locus_tag=CCO34_05055 NZ_NPMD01000002.1 Protein Homology CDS 189839 190558 . - 0 ID=cds-WP_000836268.1;Parent=gene-CCO34_RS05055;Dbxref=GenBank:WP_000836268.1;Name=WP_000836268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=CCO34_RS05055;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_000836268.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 190698 191801 . + . ID=gene-CCO34_RS05060;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=CCO34_RS05060;old_locus_tag=CCO34_05060 NZ_NPMD01000002.1 Protein Homology CDS 190698 191801 . + 0 ID=cds-WP_000203972.1;Parent=gene-CCO34_RS05060;Dbxref=GenBank:WP_000203972.1;Name=WP_000203972.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=CCO34_RS05060;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_000203972.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 191811 192620 . + . ID=gene-CCO34_RS05065;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=CCO34_RS05065;old_locus_tag=CCO34_05065 NZ_NPMD01000002.1 Protein Homology CDS 191811 192620 . + 0 ID=cds-WP_001535488.1;Parent=gene-CCO34_RS05065;Dbxref=GenBank:WP_001535488.1;Name=WP_001535488.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=CCO34_RS05065;product=phosphonoacetaldehyde hydrolase;protein_id=WP_001535488.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 192626 192708 . + . ID=gene-CCO34_RS26165;Name=CCO34_RS26165;end_range=192708,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26165;partial=true;pseudo=true;start_range=.,192626 NZ_NPMD01000002.1 Protein Homology CDS 192626 192708 . + 0 ID=cds-CCO34_RS26165;Parent=gene-CCO34_RS26165;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=192708,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO34_RS26165;partial=true;product=hypothetical protein;pseudo=true;start_range=.,192626;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 192717 193307 . - . ID=gene-CCO34_RS05070;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=CCO34_RS05070;old_locus_tag=CCO34_05070 NZ_NPMD01000002.1 Protein Homology CDS 192717 193307 . - 0 ID=cds-WP_001275807.1;Parent=gene-CCO34_RS05070;Dbxref=GenBank:WP_001275807.1;Name=WP_001275807.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=CCO34_RS05070;product=protein deglycase YajL;protein_id=WP_001275807.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 193270 194181 . - . ID=gene-CCO34_RS05075;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=CCO34_RS05075;old_locus_tag=CCO34_05075 NZ_NPMD01000002.1 Protein Homology CDS 193270 194181 . - 0 ID=cds-WP_000705816.1;Parent=gene-CCO34_RS05075;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=CCO34_RS05075;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 194307 194798 . + . ID=gene-CCO34_RS05080;Name=CCO34_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05080;old_locus_tag=CCO34_05080 NZ_NPMD01000002.1 Protein Homology CDS 194307 194798 . + 0 ID=cds-WP_001138913.1;Parent=gene-CCO34_RS05080;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=CCO34_RS05080;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 194845 196209 . - . ID=gene-CCO34_RS05085;Name=CCO34_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05085;old_locus_tag=CCO34_05085 NZ_NPMD01000002.1 Protein Homology CDS 194845 196209 . - 0 ID=cds-WP_001000938.1;Parent=gene-CCO34_RS05085;Dbxref=GenBank:WP_001000938.1;Name=WP_001000938.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=CCO34_RS05085;product=MFS transporter;protein_id=WP_001000938.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 196734 198245 . + . ID=gene-CCO34_RS05090;Name=CCO34_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05090;old_locus_tag=CCO34_05090 NZ_NPMD01000002.1 Protein Homology CDS 196734 198245 . + 0 ID=cds-WP_023228769.1;Parent=gene-CCO34_RS05090;Dbxref=GenBank:WP_023228769.1;Name=WP_023228769.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=CCO34_RS05090;product=SEL1-like repeat protein;protein_id=WP_023228769.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 198257 199750 . + . ID=gene-CCO34_RS05095;Name=CCO34_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05095;old_locus_tag=CCO34_05095 NZ_NPMD01000002.1 Protein Homology CDS 198257 199750 . + 0 ID=cds-WP_000595936.1;Parent=gene-CCO34_RS05095;Dbxref=GenBank:WP_000595936.1;Name=WP_000595936.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=CCO34_RS05095;product=tetratricopeptide repeat protein;protein_id=WP_000595936.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 199832 200722 . - . ID=gene-CCO34_RS05100;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CCO34_RS05100;old_locus_tag=CCO34_05100 NZ_NPMD01000002.1 Protein Homology CDS 199832 200722 . - 0 ID=cds-WP_000971352.1;Parent=gene-CCO34_RS05100;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=CCO34_RS05100;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 200734 201063 . - . ID=gene-CCO34_RS05105;Name=CCO34_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05105;old_locus_tag=CCO34_05105 NZ_NPMD01000002.1 Protein Homology CDS 200734 201063 . - 0 ID=cds-WP_000019878.1;Parent=gene-CCO34_RS05105;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=CCO34_RS05105;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 201063 201677 . - . ID=gene-CCO34_RS05110;Name=CCO34_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05110;old_locus_tag=CCO34_05110 NZ_NPMD01000002.1 Protein Homology CDS 201063 201677 . - 0 ID=cds-WP_000179833.1;Parent=gene-CCO34_RS05110;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=CCO34_RS05110;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 201667 203658 . - . ID=gene-CCO34_RS05115;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=CCO34_RS05115;old_locus_tag=CCO34_05115 NZ_NPMD01000002.1 Protein Homology CDS 201667 203658 . - 0 ID=cds-WP_000467158.1;Parent=gene-CCO34_RS05115;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=CCO34_RS05115;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 203669 204625 . - . ID=gene-CCO34_RS05120;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=CCO34_RS05120;old_locus_tag=CCO34_05120 NZ_NPMD01000002.1 Protein Homology CDS 203669 204625 . - 0 ID=cds-WP_001239449.1;Parent=gene-CCO34_RS05120;Dbxref=GenBank:WP_001239449.1;Name=WP_001239449.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=CCO34_RS05120;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239449.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 205078 206553 . - . ID=gene-CCO34_RS05125;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=CCO34_RS05125;old_locus_tag=CCO34_05125 NZ_NPMD01000002.1 Protein Homology CDS 205078 206553 . - 0 ID=cds-WP_000098477.1;Parent=gene-CCO34_RS05125;Dbxref=GenBank:WP_000098477.1;Name=WP_000098477.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=CCO34_RS05125;product=muropeptide MFS transporter AmpG;protein_id=WP_000098477.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 206597 207175 . - . ID=gene-CCO34_RS05130;Name=CCO34_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05130;old_locus_tag=CCO34_05130 NZ_NPMD01000002.1 Protein Homology CDS 206597 207175 . - 0 ID=cds-WP_001537832.1;Parent=gene-CCO34_RS05130;Dbxref=GenBank:WP_001537832.1;Name=WP_001537832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=CCO34_RS05130;product=lipoprotein;protein_id=WP_001537832.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 207479 207796 . + . ID=gene-CCO34_RS05140;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=CCO34_RS05140;old_locus_tag=CCO34_05140 NZ_NPMD01000002.1 Protein Homology CDS 207479 207796 . + 0 ID=cds-WP_000973433.1;Parent=gene-CCO34_RS05140;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=CCO34_RS05140;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 208143 209441 . + . ID=gene-CCO34_RS05150;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CCO34_RS05150;old_locus_tag=CCO34_05150 NZ_NPMD01000002.1 Protein Homology CDS 208143 209441 . + 0 ID=cds-WP_001198403.1;Parent=gene-CCO34_RS05150;Dbxref=GenBank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=CCO34_RS05150;product=trigger factor;protein_id=WP_001198403.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 209688 210311 . + . ID=gene-CCO34_RS05155;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CCO34_RS05155;old_locus_tag=CCO34_05155 NZ_NPMD01000002.1 Protein Homology CDS 209688 210311 . + 0 ID=cds-WP_000122257.1;Parent=gene-CCO34_RS05155;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=CCO34_RS05155;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 210563 211834 . + . ID=gene-CCO34_RS05160;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CCO34_RS05160;old_locus_tag=CCO34_05160 NZ_NPMD01000002.1 Protein Homology CDS 210563 211834 . + 0 ID=cds-WP_000130314.1;Parent=gene-CCO34_RS05160;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=CCO34_RS05160;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 212020 214374 . + . ID=gene-CCO34_RS05165;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=CCO34_RS05165;old_locus_tag=CCO34_05165 NZ_NPMD01000002.1 Protein Homology CDS 212020 214374 . + 0 ID=cds-WP_001067723.1;Parent=gene-CCO34_RS05165;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=CCO34_RS05165;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 214565 214855 . + . ID=gene-CCO34_RS05170;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=CCO34_RS05170;old_locus_tag=CCO34_05170 NZ_NPMD01000002.1 Protein Homology CDS 214565 214855 . + 0 ID=cds-WP_254888479.1;Parent=gene-CCO34_RS05170;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=CCO34_RS05170;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 215146 217017 . + . ID=gene-CCO34_RS05175;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=CCO34_RS05175;old_locus_tag=CCO34_05175 NZ_NPMD01000002.1 Protein Homology CDS 215146 217017 . + 0 ID=cds-WP_000969434.1;Parent=gene-CCO34_RS05175;Dbxref=GenBank:WP_000969434.1;Name=WP_000969434.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=CCO34_RS05175;product=peptidylprolyl isomerase;protein_id=WP_000969434.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 217167 217541 . + . ID=gene-CCO34_RS05180;Name=CCO34_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05180;old_locus_tag=CCO34_05180 NZ_NPMD01000002.1 Protein Homology CDS 217167 217541 . + 0 ID=cds-WP_000680322.1;Parent=gene-CCO34_RS05180;Dbxref=GenBank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=CCO34_RS05180;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 217645 218043 . + . ID=gene-CCO34_RS05185;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=CCO34_RS05185;old_locus_tag=CCO34_05185 NZ_NPMD01000002.1 Protein Homology CDS 217645 218043 . + 0 ID=cds-WP_001194543.1;Parent=gene-CCO34_RS05185;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=CCO34_RS05185;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 218149 218844 . - . ID=gene-CCO34_RS05190;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CCO34_RS05190;old_locus_tag=CCO34_05190 NZ_NPMD01000002.1 Protein Homology CDS 218149 218844 . - 0 ID=cds-WP_000817204.1;Parent=gene-CCO34_RS05190;Dbxref=GenBank:WP_000817204.1;Name=WP_000817204.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=CCO34_RS05190;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817204.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 218909 220609 . - . ID=gene-CCO34_RS05195;Name=CCO34_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05195;old_locus_tag=CCO34_05195 NZ_NPMD01000002.1 Protein Homology CDS 218909 220609 . - 0 ID=cds-WP_001238177.1;Parent=gene-CCO34_RS05195;Dbxref=GenBank:WP_001238177.1;Name=WP_001238177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=CCO34_RS05195;product=SgrR family transcriptional regulator;protein_id=WP_001238177.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 220710 221528 . + . ID=gene-CCO34_RS05200;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=CCO34_RS05200;old_locus_tag=CCO34_05200 NZ_NPMD01000002.1 Protein Homology CDS 220710 221528 . + 0 ID=cds-WP_000113035.1;Parent=gene-CCO34_RS05200;Dbxref=GenBank:WP_000113035.1;Name=WP_000113035.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=CCO34_RS05200;product=HMP-PP phosphatase;protein_id=WP_000113035.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 221578 222633 . - . ID=gene-CCO34_RS05205;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=CCO34_RS05205;old_locus_tag=CCO34_05205 NZ_NPMD01000002.1 Protein Homology CDS 221578 222633 . - 0 ID=cds-WP_094965405.1;Parent=gene-CCO34_RS05205;Dbxref=GenBank:WP_094965405.1;Name=WP_094965405.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=CCO34_RS05205;product=cysteine desulfhydrase;protein_id=WP_094965405.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 222746 223204 . + . ID=gene-CCO34_RS05210;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=CCO34_RS05210;old_locus_tag=CCO34_05210 NZ_NPMD01000002.1 Protein Homology CDS 222746 223204 . + 0 ID=cds-WP_000884593.1;Parent=gene-CCO34_RS05210;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=CCO34_RS05210;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 223245 225017 . + . ID=gene-CCO34_RS05215;Name=CCO34_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05215;old_locus_tag=CCO34_05215 NZ_NPMD01000002.1 Protein Homology CDS 223245 225017 . + 0 ID=cds-WP_001235573.1;Parent=gene-CCO34_RS05215;Dbxref=GenBank:WP_001235573.1;Name=WP_001235573.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=CCO34_RS05215;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235573.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 225010 226791 . + . ID=gene-CCO34_RS05220;Name=CCO34_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05220;old_locus_tag=CCO34_05220 NZ_NPMD01000002.1 Protein Homology CDS 225010 226791 . + 0 ID=cds-WP_001256063.1;Parent=gene-CCO34_RS05220;Dbxref=GenBank:WP_001256063.1;Name=WP_001256063.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=CCO34_RS05220;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256063.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 226823 226948 . - . ID=gene-CCO34_RS26020;Name=CCO34_RS26020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26020 NZ_NPMD01000002.1 GeneMarkS-2+ CDS 226823 226948 . - 0 ID=cds-WP_016712120.1;Parent=gene-CCO34_RS26020;Dbxref=GenBank:WP_016712120.1;Name=WP_016712120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS26020;product=hypothetical protein;protein_id=WP_016712120.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 227004 227342 . + . ID=gene-CCO34_RS05225;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=CCO34_RS05225;old_locus_tag=CCO34_05225 NZ_NPMD01000002.1 Protein Homology CDS 227004 227342 . + 0 ID=cds-WP_000780341.1;Parent=gene-CCO34_RS05225;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=CCO34_RS05225;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 227374 228660 . + . ID=gene-CCO34_RS05230;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=CCO34_RS05230;old_locus_tag=CCO34_05230 NZ_NPMD01000002.1 Protein Homology CDS 227374 228660 . + 0 ID=cds-WP_000684912.1;Parent=gene-CCO34_RS05230;Dbxref=GenBank:WP_000684912.1;Name=WP_000684912.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=CCO34_RS05230;product=ammonium transporter AmtB;protein_id=WP_000684912.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 228760 229620 . - . ID=gene-CCO34_RS05235;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=CCO34_RS05235;old_locus_tag=CCO34_05235 NZ_NPMD01000002.1 Protein Homology CDS 228760 229620 . - 0 ID=cds-WP_000084176.1;Parent=gene-CCO34_RS05235;Dbxref=GenBank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=CCO34_RS05235;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 229835 230404 . + . ID=gene-CCO34_RS05240;Name=CCO34_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05240;old_locus_tag=CCO34_05240 NZ_NPMD01000002.1 Protein Homology CDS 229835 230404 . + 0 ID=cds-WP_000779802.1;Parent=gene-CCO34_RS05240;Dbxref=GenBank:WP_000779802.1;Name=WP_000779802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=CCO34_RS05240;product=YbaY family lipoprotein;protein_id=WP_000779802.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 230437 230826 . - . ID=gene-CCO34_RS05245;Name=CCO34_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05245;old_locus_tag=CCO34_05245 NZ_NPMD01000002.1 Protein Homology CDS 230437 230826 . - 0 ID=cds-WP_000961285.1;Parent=gene-CCO34_RS05245;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=CCO34_RS05245;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 230911 231007 . + . ID=gene-CCO34_RS05250;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CCO34_RS05250;old_locus_tag=CCO34_05250 NZ_NPMD01000002.1 cmsearch SRP_RNA 230911 231007 . + . ID=rna-CCO34_RS05250;Parent=gene-CCO34_RS05250;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS05250;product=signal recognition particle sRNA small type NZ_NPMD01000002.1 cmsearch exon 230911 231007 . + . ID=exon-CCO34_RS05250-1;Parent=rna-CCO34_RS05250;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS05250;product=signal recognition particle sRNA small type NZ_NPMD01000002.1 RefSeq gene 231057 232607 . - . ID=gene-CCO34_RS05255;Name=CCO34_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05255;old_locus_tag=CCO34_05255 NZ_NPMD01000002.1 Protein Homology CDS 231057 232607 . - 0 ID=cds-WP_000213142.1;Parent=gene-CCO34_RS05255;Dbxref=GenBank:WP_000213142.1;Name=WP_000213142.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=CCO34_RS05255;product=EAL domain-containing protein;protein_id=WP_000213142.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 232832 233092 . + . ID=gene-CCO34_RS05260;Name=CCO34_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05260;old_locus_tag=CCO34_05260 NZ_NPMD01000002.1 Protein Homology CDS 232832 233092 . + 0 ID=cds-WP_000801415.1;Parent=gene-CCO34_RS05260;Dbxref=GenBank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=CCO34_RS05260;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 233098 233238 . + . ID=gene-CCO34_RS05265;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=CCO34_RS05265;old_locus_tag=CCO34_05265 NZ_NPMD01000002.1 Protein Homology CDS 233098 233238 . + 0 ID=cds-WP_001197749.1;Parent=gene-CCO34_RS05265;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=CCO34_RS05265;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 233294 233764 . - . ID=gene-CCO34_RS05270;Name=CCO34_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05270;old_locus_tag=CCO34_05270 NZ_NPMD01000002.1 Protein Homology CDS 233294 233764 . - 0 ID=cds-WP_000136181.1;Parent=gene-CCO34_RS05270;Dbxref=GenBank:WP_000136181.1;Name=WP_000136181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=CCO34_RS05270;product=YlaC family protein;protein_id=WP_000136181.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 233881 234432 . - . ID=gene-CCO34_RS05275;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=CCO34_RS05275;old_locus_tag=CCO34_05275 NZ_NPMD01000002.1 Protein Homology CDS 233881 234432 . - 0 ID=cds-WP_001278792.1;Parent=gene-CCO34_RS05275;Dbxref=GenBank:WP_001278792.1;Name=WP_001278792.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=CCO34_RS05275;product=maltose O-acetyltransferase;protein_id=WP_001278792.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 234611 234829 . - . ID=gene-CCO34_RS05280;Name=CCO34_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05280;old_locus_tag=CCO34_05280 NZ_NPMD01000002.1 Protein Homology CDS 234611 234829 . - 0 ID=cds-WP_001280991.1;Parent=gene-CCO34_RS05280;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=CCO34_RS05280;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 234857 235231 . - . ID=gene-CCO34_RS05285;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=CCO34_RS05285;old_locus_tag=CCO34_05285 NZ_NPMD01000002.1 Protein Homology CDS 234857 235231 . - 0 ID=cds-WP_000344807.1;Parent=gene-CCO34_RS05285;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=CCO34_RS05285;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 235727 238876 . - . ID=gene-CCO34_RS05290;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=CCO34_RS05290;old_locus_tag=CCO34_05290 NZ_NPMD01000002.1 Protein Homology CDS 235727 238876 . - 0 ID=cds-WP_001132508.1;Parent=gene-CCO34_RS05290;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=CCO34_RS05290;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 238899 240092 . - . ID=gene-CCO34_RS05295;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=CCO34_RS05295;old_locus_tag=CCO34_05295 NZ_NPMD01000002.1 Protein Homology CDS 238899 240092 . - 0 ID=cds-WP_001039202.1;Parent=gene-CCO34_RS05295;Dbxref=GenBank:WP_001039202.1;Name=WP_001039202.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=CCO34_RS05295;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039202.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 240234 240887 . + . ID=gene-CCO34_RS05300;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=CCO34_RS05300;old_locus_tag=CCO34_05300 NZ_NPMD01000002.1 Protein Homology CDS 240234 240887 . + 0 ID=cds-WP_000101755.1;Parent=gene-CCO34_RS05300;Dbxref=GenBank:WP_000101755.1;Name=WP_000101755.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=CCO34_RS05300;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101755.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 241006 244368 . + . ID=gene-CCO34_RS05305;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=CCO34_RS05305;old_locus_tag=CCO34_05305 NZ_NPMD01000002.1 Protein Homology CDS 241006 244368 . + 0 ID=cds-WP_000178234.1;Parent=gene-CCO34_RS05305;Dbxref=GenBank:WP_000178234.1;Name=WP_000178234.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=CCO34_RS05305;product=mechanosensitive channel MscK;protein_id=WP_000178234.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 244410 245333 . - . ID=gene-CCO34_RS05310;Name=CCO34_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05310;old_locus_tag=CCO34_05310 NZ_NPMD01000002.1 Protein Homology CDS 244410 245333 . - 0 ID=cds-WP_000440527.1;Parent=gene-CCO34_RS05310;Dbxref=GenBank:WP_000440527.1;Name=WP_000440527.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=CCO34_RS05310;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000440527.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 245403 245570 . - . ID=gene-CCO34_RS05315;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=CCO34_RS05315;old_locus_tag=CCO34_05315 NZ_NPMD01000002.1 Protein Homology CDS 245403 245570 . - 0 ID=cds-WP_000051161.1;Parent=gene-CCO34_RS05315;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=CCO34_RS05315;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 245584 246111 . - . ID=gene-CCO34_RS05320;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=CCO34_RS05320;old_locus_tag=CCO34_05320 NZ_NPMD01000002.1 Protein Homology CDS 245584 246111 . - 0 ID=cds-WP_023228612.1;Parent=gene-CCO34_RS05320;Dbxref=GenBank:WP_023228612.1;Name=WP_023228612.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=CCO34_RS05320;product=primosomal replication protein N'';protein_id=WP_023228612.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 246180 246557 . + . ID=gene-CCO34_RS05325;Name=CCO34_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05325;old_locus_tag=CCO34_05325 NZ_NPMD01000002.1 Protein Homology CDS 246180 246557 . + 0 ID=cds-WP_001189860.1;Parent=gene-CCO34_RS05325;Dbxref=GenBank:WP_001189860.1;Name=WP_001189860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=CCO34_RS05325;product=DUF454 family protein;protein_id=WP_001189860.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 246710 247261 . + . ID=gene-CCO34_RS05335;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=CCO34_RS05335;old_locus_tag=CCO34_05335 NZ_NPMD01000002.1 Protein Homology CDS 246710 247261 . + 0 ID=cds-WP_000127350.1;Parent=gene-CCO34_RS05335;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=CCO34_RS05335;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 247375 249303 . + . ID=gene-CCO34_RS05340;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CCO34_RS05340;old_locus_tag=CCO34_05340 NZ_NPMD01000002.1 Protein Homology CDS 247375 249303 . + 0 ID=cds-WP_000121967.1;Parent=gene-CCO34_RS05340;Dbxref=GenBank:WP_000121967.1;Name=WP_000121967.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=CCO34_RS05340;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121967.1;transl_table=11 NZ_NPMD01000002.1 cmsearch sequence_feature 248636 248700 . + . ID=id-CCO34_RS05340;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS05340 NZ_NPMD01000002.1 RefSeq gene 249349 249678 . + . ID=gene-CCO34_RS05345;Name=CCO34_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05345;old_locus_tag=CCO34_05345 NZ_NPMD01000002.1 Protein Homology CDS 249349 249678 . + 0 ID=cds-WP_000467098.1;Parent=gene-CCO34_RS05345;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=CCO34_RS05345;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 249678 250283 . + . ID=gene-CCO34_RS05350;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CCO34_RS05350;old_locus_tag=CCO34_05350 NZ_NPMD01000002.1 Protein Homology CDS 249678 250283 . + 0 ID=cds-WP_001195023.1;Parent=gene-CCO34_RS05350;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=CCO34_RS05350;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 250394 252268 . + . ID=gene-CCO34_RS05355;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=CCO34_RS05355;old_locus_tag=CCO34_05355 NZ_NPMD01000002.1 Protein Homology CDS 250394 252268 . + 0 ID=cds-WP_001523272.1;Parent=gene-CCO34_RS05355;Dbxref=GenBank:WP_001523272.1;Name=WP_001523272.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=CCO34_RS05355;product=molecular chaperone HtpG;protein_id=WP_001523272.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 252510 253154 . + . ID=gene-CCO34_RS05365;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=CCO34_RS05365;old_locus_tag=CCO34_05365 NZ_NPMD01000002.1 Protein Homology CDS 252510 253154 . + 0 ID=cds-WP_001220237.1;Parent=gene-CCO34_RS05365;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=CCO34_RS05365;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 253383 254345 . + . ID=gene-CCO34_RS05375;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CCO34_RS05375;old_locus_tag=CCO34_05375 NZ_NPMD01000002.1 Protein Homology CDS 253383 254345 . + 0 ID=cds-WP_001250074.1;Parent=gene-CCO34_RS05375;Dbxref=GenBank:WP_001250074.1;Name=WP_001250074.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=CCO34_RS05375;product=ferrochelatase;protein_id=WP_001250074.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 254342 255313 . - . ID=gene-CCO34_RS05380;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=CCO34_RS05380;old_locus_tag=CCO34_05380 NZ_NPMD01000002.1 Protein Homology CDS 254342 255313 . - 0 ID=cds-WP_000801779.1;Parent=gene-CCO34_RS05380;Dbxref=GenBank:WP_000801779.1;Name=WP_000801779.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=CCO34_RS05380;product=acetyl esterase;protein_id=WP_000801779.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 255466 256770 . + . ID=gene-CCO34_RS05385;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=CCO34_RS05385;old_locus_tag=CCO34_05385 NZ_NPMD01000002.1 Protein Homology CDS 255466 256770 . + 0 ID=cds-WP_000671592.1;Parent=gene-CCO34_RS05385;Dbxref=GenBank:WP_000671592.1;Name=WP_000671592.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=CCO34_RS05385;product=inosine/guanosine kinase;protein_id=WP_000671592.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 256819 258495 . - . ID=gene-CCO34_RS05390;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=CCO34_RS05390;old_locus_tag=CCO34_05390 NZ_NPMD01000002.1 Protein Homology CDS 256819 258495 . - 0 ID=cds-WP_000546202.1;Parent=gene-CCO34_RS05390;Dbxref=GenBank:WP_000546202.1;Name=WP_000546202.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=CCO34_RS05390;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546202.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 258710 259930 . - . ID=gene-CCO34_RS05395;Name=CCO34_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05395;old_locus_tag=CCO34_05395 NZ_NPMD01000002.1 Protein Homology CDS 258710 259930 . - 0 ID=cds-WP_001251593.1;Parent=gene-CCO34_RS05395;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=CCO34_RS05395;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 260103 261755 . + . ID=gene-CCO34_RS05400;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=CCO34_RS05400;old_locus_tag=CCO34_05400 NZ_NPMD01000002.1 Protein Homology CDS 260103 261755 . + 0 ID=cds-WP_000670398.1;Parent=gene-CCO34_RS05400;Dbxref=GenBank:WP_000670398.1;Name=WP_000670398.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=CCO34_RS05400;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670398.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 261872 262351 . - . ID=gene-CCO34_RS05405;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CCO34_RS05405;old_locus_tag=CCO34_05405 NZ_NPMD01000002.1 Protein Homology CDS 261872 262351 . - 0 ID=cds-WP_000186617.1;Parent=gene-CCO34_RS05405;Dbxref=GenBank:WP_000186617.1;Name=WP_000186617.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=CCO34_RS05405;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186617.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 262553 263347 . - . ID=gene-CCO34_RS05410;Name=CCO34_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05410;old_locus_tag=CCO34_05410 NZ_NPMD01000002.1 Protein Homology CDS 262553 263347 . - 0 ID=cds-WP_000771536.1;Parent=gene-CCO34_RS05410;Dbxref=GenBank:WP_000771536.1;Name=WP_000771536.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=CCO34_RS05410;product=TraB/GumN family protein;protein_id=WP_000771536.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 263433 264260 . - . ID=gene-CCO34_RS05415;Name=CCO34_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05415;old_locus_tag=CCO34_05415 NZ_NPMD01000002.1 Protein Homology CDS 263433 264260 . - 0 ID=cds-WP_000488553.1;Parent=gene-CCO34_RS05415;Dbxref=GenBank:WP_000488553.1;Name=WP_000488553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=CCO34_RS05415;product=lysozyme inhibitor LprI family protein;protein_id=WP_000488553.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 264414 266915 . - . ID=gene-CCO34_RS05420;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=CCO34_RS05420;old_locus_tag=CCO34_05420 NZ_NPMD01000002.1 Protein Homology CDS 264414 266915 . - 0 ID=cds-WP_000083913.1;Parent=gene-CCO34_RS05420;Dbxref=GenBank:WP_000083913.1;Name=WP_000083913.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=CCO34_RS05420;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083913.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 267025 267441 . + . ID=gene-CCO34_RS05425;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=CCO34_RS05425;old_locus_tag=CCO34_05425 NZ_NPMD01000002.1 Protein Homology CDS 267025 267441 . + 0 ID=cds-WP_001026760.1;Parent=gene-CCO34_RS05425;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=CCO34_RS05425;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 267442 267894 . - . ID=gene-CCO34_RS05430;Name=CCO34_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05430;old_locus_tag=CCO34_05430 NZ_NPMD01000002.1 Protein Homology CDS 267442 267894 . - 0 ID=cds-WP_000561177.1;Parent=gene-CCO34_RS05430;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=CCO34_RS05430;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 267891 268808 . - . ID=gene-CCO34_RS05435;Name=CCO34_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05435;old_locus_tag=CCO34_05435 NZ_NPMD01000002.1 Protein Homology CDS 267891 268808 . - 0 ID=cds-WP_000906146.1;Parent=gene-CCO34_RS05435;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=CCO34_RS05435;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 268955 269632 . + . ID=gene-CCO34_RS05440;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=CCO34_RS05440;old_locus_tag=CCO34_05440 NZ_NPMD01000002.1 Protein Homology CDS 268955 269632 . + 0 ID=cds-WP_000140189.1;Parent=gene-CCO34_RS05440;Dbxref=GenBank:WP_000140189.1;Name=WP_000140189.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=CCO34_RS05440;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_000140189.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 269619 270398 . + . ID=gene-CCO34_RS05445;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=CCO34_RS05445;old_locus_tag=CCO34_05445 NZ_NPMD01000002.1 Protein Homology CDS 269619 270398 . + 0 ID=cds-WP_001002130.1;Parent=gene-CCO34_RS05445;Dbxref=GenBank:WP_001002130.1;Name=WP_001002130.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=CCO34_RS05445;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 270484 271338 . - . ID=gene-CCO34_RS05450;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=CCO34_RS05450;old_locus_tag=CCO34_05450 NZ_NPMD01000002.1 Protein Homology CDS 270484 271338 . - 0 ID=cds-WP_000116049.1;Parent=gene-CCO34_RS05450;Dbxref=GenBank:WP_000116049.1;Name=WP_000116049.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=CCO34_RS05450;product=chaperedoxin;protein_id=WP_000116049.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 271398 272168 . - . ID=gene-CCO34_RS05455;Name=CCO34_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05455;old_locus_tag=CCO34_05455 NZ_NPMD01000002.1 Protein Homology CDS 271398 272168 . - 0 ID=cds-WP_001172804.1;Parent=gene-CCO34_RS05455;Dbxref=GenBank:WP_001172804.1;Name=WP_001172804.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=CCO34_RS05455;product=SDR family oxidoreductase;protein_id=WP_001172804.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 272323 272937 . - . ID=gene-CCO34_RS05460;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=CCO34_RS05460;old_locus_tag=CCO34_05460 NZ_NPMD01000002.1 Protein Homology CDS 272323 272937 . - 0 ID=cds-WP_001010576.1;Parent=gene-CCO34_RS05460;Dbxref=GenBank:WP_001010576.1;Name=WP_001010576.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=CCO34_RS05460;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010576.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 272908 273594 . + . ID=gene-CCO34_RS05465;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=CCO34_RS05465;old_locus_tag=CCO34_05465 NZ_NPMD01000002.1 Protein Homology CDS 272908 273594 . + 0 ID=cds-WP_001110590.1;Parent=gene-CCO34_RS05465;Dbxref=GenBank:WP_001110590.1;Name=WP_001110590.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904898.1;locus_tag=CCO34_RS05465;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110590.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 273591 276005 . + . ID=gene-CCO34_RS05470;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=CCO34_RS05470;old_locus_tag=CCO34_05470 NZ_NPMD01000002.1 Protein Homology CDS 273591 276005 . + 0 ID=cds-WP_000561765.1;Parent=gene-CCO34_RS05470;Dbxref=GenBank:WP_000561765.1;Name=WP_000561765.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=CCO34_RS05470;product=putative ABC transporter permease subunit YbbP;protein_id=WP_000561765.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 276191 277324 . + . ID=gene-CCO34_RS05475;Name=CCO34_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05475;old_locus_tag=CCO34_05475 NZ_NPMD01000002.1 Protein Homology CDS 276191 277324 . + 0 ID=cds-WP_000152869.1;Parent=gene-CCO34_RS05475;Dbxref=GenBank:WP_000152869.1;Name=WP_000152869.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=CCO34_RS05475;product=porin;protein_id=WP_000152869.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 277581 278411 . + . ID=gene-CCO34_RS05480;Name=CCO34_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05480;old_locus_tag=CCO34_05480 NZ_NPMD01000002.1 Protein Homology CDS 277581 278411 . + 0 ID=cds-WP_000524317.1;Parent=gene-CCO34_RS05480;Dbxref=GenBank:WP_000524317.1;Name=WP_000524317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=CCO34_RS05480;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000524317.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 278448 279464 . + . ID=gene-CCO34_RS05485;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=CCO34_RS05485;old_locus_tag=CCO34_05485 NZ_NPMD01000002.1 Protein Homology CDS 278448 279464 . + 0 ID=cds-WP_000569660.1;Parent=gene-CCO34_RS05485;Dbxref=GenBank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=CCO34_RS05485;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 279457 280116 . + . ID=gene-CCO34_RS05490;Name=CCO34_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05490;old_locus_tag=CCO34_05490 NZ_NPMD01000002.1 Protein Homology CDS 279457 280116 . + 0 ID=cds-WP_000342247.1;Parent=gene-CCO34_RS05490;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=CCO34_RS05490;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 280145 281239 . - . ID=gene-CCO34_RS05495;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=CCO34_RS05495;old_locus_tag=CCO34_05495 NZ_NPMD01000002.1 Protein Homology CDS 280145 281239 . - 0 ID=cds-WP_001154060.1;Parent=gene-CCO34_RS05495;Dbxref=GenBank:WP_001154060.1;Name=WP_001154060.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=CCO34_RS05495;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001154060.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 281309 282235 . - . ID=gene-CCO34_RS05500;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=CCO34_RS05500;old_locus_tag=CCO34_05500 NZ_NPMD01000002.1 Protein Homology CDS 281309 282235 . - 0 ID=cds-WP_000460169.1;Parent=gene-CCO34_RS05500;Dbxref=GenBank:WP_000460169.1;Name=WP_000460169.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=CCO34_RS05500;product=HTH-type transcriptional activator AllS;protein_id=WP_000460169.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 282462 282944 . + . ID=gene-CCO34_RS05505;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=CCO34_RS05505;old_locus_tag=CCO34_05505 NZ_NPMD01000002.1 Protein Homology CDS 282462 282944 . + 0 ID=cds-WP_000764659.1;Parent=gene-CCO34_RS05505;Dbxref=GenBank:WP_000764659.1;Name=WP_000764659.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=CCO34_RS05505;product=ureidoglycolate lyase;protein_id=WP_000764659.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 283023 283841 . + . ID=gene-CCO34_RS05510;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=CCO34_RS05510;old_locus_tag=CCO34_05510 NZ_NPMD01000002.1 Protein Homology CDS 283023 283841 . + 0 ID=cds-WP_000141265.1;Parent=gene-CCO34_RS05510;Dbxref=GenBank:WP_000141265.1;Name=WP_000141265.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=CCO34_RS05510;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141265.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 283926 285707 . + . ID=gene-CCO34_RS05515;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=CCO34_RS05515;old_locus_tag=CCO34_05515 NZ_NPMD01000002.1 Protein Homology CDS 283926 285707 . + 0 ID=cds-WP_001096865.1;Parent=gene-CCO34_RS05515;Dbxref=GenBank:WP_001096865.1;Name=WP_001096865.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=CCO34_RS05515;product=glyoxylate carboligase;protein_id=WP_001096865.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 285720 286496 . + . ID=gene-CCO34_RS05520;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=CCO34_RS05520;old_locus_tag=CCO34_05520 NZ_NPMD01000002.1 Protein Homology CDS 285720 286496 . + 0 ID=cds-WP_000943591.1;Parent=gene-CCO34_RS05520;Dbxref=GenBank:WP_000943591.1;Name=WP_000943591.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=CCO34_RS05520;product=hydroxypyruvate isomerase Gip;protein_id=WP_000943591.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 286596 287474 . + . ID=gene-CCO34_RS05525;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=CCO34_RS05525;old_locus_tag=CCO34_05525 NZ_NPMD01000002.1 Protein Homology CDS 286596 287474 . + 0 ID=cds-WP_000765811.1;Parent=gene-CCO34_RS05525;Dbxref=GenBank:WP_000765811.1;Name=WP_000765811.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=CCO34_RS05525;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765811.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 287540 288787 . + . ID=gene-CCO34_RS05530;Name=CCO34_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05530;old_locus_tag=CCO34_05530 NZ_NPMD01000002.1 Protein Homology CDS 287540 288787 . + 0 ID=cds-WP_000005063.1;Parent=gene-CCO34_RS05530;Dbxref=GenBank:WP_000005063.1;Name=WP_000005063.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=CCO34_RS05530;product=MFS transporter;protein_id=WP_000005063.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 288883 290337 . + . ID=gene-CCO34_RS05535;Name=CCO34_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05535;old_locus_tag=CCO34_05535 NZ_NPMD01000002.1 Protein Homology CDS 288883 290337 . + 0 ID=cds-WP_000401064.1;Parent=gene-CCO34_RS05535;Dbxref=GenBank:WP_000401064.1;Name=WP_000401064.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=CCO34_RS05535;product=allantoin transporter;protein_id=WP_000401064.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 290416 291777 . + . ID=gene-CCO34_RS05540;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=CCO34_RS05540;old_locus_tag=CCO34_05540 NZ_NPMD01000002.1 Protein Homology CDS 290416 291777 . + 0 ID=cds-WP_000006865.1;Parent=gene-CCO34_RS05540;Dbxref=GenBank:WP_000006865.1;Name=WP_000006865.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=CCO34_RS05540;product=allantoinase AllB;protein_id=WP_000006865.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 291836 293134 . + . ID=gene-CCO34_RS05545;Name=CCO34_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05545;old_locus_tag=CCO34_05545 NZ_NPMD01000002.1 Protein Homology CDS 291836 293134 . + 0 ID=cds-WP_094965406.1;Parent=gene-CCO34_RS05545;Dbxref=GenBank:WP_094965406.1;Name=WP_094965406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=CCO34_RS05545;product=uracil/xanthine transporter;protein_id=WP_094965406.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 293157 294305 . + . ID=gene-CCO34_RS05550;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=CCO34_RS05550;old_locus_tag=CCO34_05550 NZ_NPMD01000002.1 Protein Homology CDS 293157 294305 . + 0 ID=cds-WP_000706331.1;Parent=gene-CCO34_RS05550;Dbxref=GenBank:WP_000706331.1;Name=WP_000706331.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=CCO34_RS05550;product=glycerate 3-kinase;protein_id=WP_000706331.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 294385 295170 . - . ID=gene-CCO34_RS05555;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=CCO34_RS05555;old_locus_tag=CCO34_05555 NZ_NPMD01000002.1 Protein Homology CDS 294385 295170 . - 0 ID=cds-WP_000540981.1;Parent=gene-CCO34_RS05555;Dbxref=GenBank:WP_000540981.1;Name=WP_000540981.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=CCO34_RS05555;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540981.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 295181 296416 . - . ID=gene-CCO34_RS05560;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=CCO34_RS05560;old_locus_tag=CCO34_05560 NZ_NPMD01000002.1 Protein Homology CDS 295181 296416 . - 0 ID=cds-WP_000589769.1;Parent=gene-CCO34_RS05560;Dbxref=GenBank:WP_000589769.1;Name=WP_000589769.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=CCO34_RS05560;product=allantoate deiminase;protein_id=WP_000589769.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 296438 297487 . - . ID=gene-CCO34_RS05565;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=CCO34_RS05565;old_locus_tag=CCO34_05565 NZ_NPMD01000002.1 Protein Homology CDS 296438 297487 . - 0 ID=cds-WP_000703943.1;Parent=gene-CCO34_RS05565;Dbxref=GenBank:WP_000703943.1;Name=WP_000703943.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=CCO34_RS05565;product=ureidoglycolate dehydrogenase AllD;protein_id=WP_000703943.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 297803 299467 . + . ID=gene-CCO34_RS05570;Name=CCO34_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05570;old_locus_tag=CCO34_05570 NZ_NPMD01000002.1 Protein Homology CDS 297803 299467 . + 0 ID=cds-WP_000580906.1;Parent=gene-CCO34_RS05570;Dbxref=GenBank:WP_000580906.1;Name=WP_000580906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=CCO34_RS05570;product=acyl-CoA synthetase FdrA;protein_id=WP_000580906.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 299477 300736 . + . ID=gene-CCO34_RS05575;Name=CCO34_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05575;old_locus_tag=CCO34_05575 NZ_NPMD01000002.1 Protein Homology CDS 299477 300736 . + 0 ID=cds-WP_000495323.1;Parent=gene-CCO34_RS05575;Dbxref=GenBank:WP_000495323.1;Name=WP_000495323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=CCO34_RS05575;product=DUF1116 domain-containing protein;protein_id=WP_000495323.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 300748 301557 . + . ID=gene-CCO34_RS05580;Name=CCO34_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05580;old_locus_tag=CCO34_05580 NZ_NPMD01000002.1 Protein Homology CDS 300748 301557 . + 0 ID=cds-WP_000821191.1;Parent=gene-CCO34_RS05580;Dbxref=GenBank:WP_000821191.1;Name=WP_000821191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=CCO34_RS05580;product=DUF2877 domain-containing protein;protein_id=WP_000821191.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 301561 302454 . + . ID=gene-CCO34_RS05585;Name=CCO34_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05585;old_locus_tag=CCO34_05585 NZ_NPMD01000002.1 Protein Homology CDS 301561 302454 . + 0 ID=cds-WP_000855344.1;Parent=gene-CCO34_RS05585;Dbxref=GenBank:WP_000855344.1;Name=WP_000855344.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=CCO34_RS05585;product=carbamate kinase;protein_id=WP_000855344.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 302495 303562 . - . ID=gene-CCO34_RS05590;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CCO34_RS05590;old_locus_tag=CCO34_05590 NZ_NPMD01000002.1 Protein Homology CDS 302495 303562 . - 0 ID=cds-WP_000815601.1;Parent=gene-CCO34_RS05590;Dbxref=GenBank:WP_000815601.1;Name=WP_000815601.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=CCO34_RS05590;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815601.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 303559 304068 . - . ID=gene-CCO34_RS05595;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CCO34_RS05595;old_locus_tag=CCO34_05595 NZ_NPMD01000002.1 Protein Homology CDS 303559 304068 . - 0 ID=cds-WP_000098736.1;Parent=gene-CCO34_RS05595;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=CCO34_RS05595;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 304186 304908 . - . ID=gene-CCO34_RS05605;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=CCO34_RS05605;old_locus_tag=CCO34_05605 NZ_NPMD01000002.1 Protein Homology CDS 304186 304908 . - 0 ID=cds-WP_000212284.1;Parent=gene-CCO34_RS05605;Dbxref=GenBank:WP_000212284.1;Name=WP_000212284.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=CCO34_RS05605;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212284.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 304911 305405 . - . ID=gene-CCO34_RS05610;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=CCO34_RS05610;old_locus_tag=CCO34_05610 NZ_NPMD01000002.1 Protein Homology CDS 304911 305405 . - 0 ID=cds-WP_000255991.1;Parent=gene-CCO34_RS05610;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=CCO34_RS05610;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 305578 306963 . + . ID=gene-CCO34_RS05615;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CCO34_RS05615;old_locus_tag=CCO34_05615 NZ_NPMD01000002.1 Protein Homology CDS 305578 306963 . + 0 ID=cds-WP_000912376.1;Parent=gene-CCO34_RS05615;Dbxref=GenBank:WP_000912376.1;Name=WP_000912376.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=CCO34_RS05615;product=cysteine--tRNA ligase;protein_id=WP_000912376.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 307007 307831 . - . ID=gene-CCO34_RS05620;Name=CCO34_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05620;old_locus_tag=CCO34_05620 NZ_NPMD01000002.1 Protein Homology CDS 307007 307831 . - 0 ID=cds-WP_000818108.1;Parent=gene-CCO34_RS05620;Dbxref=GenBank:WP_000818108.1;Name=WP_000818108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=CCO34_RS05620;product=DUF2145 domain-containing protein;protein_id=WP_000818108.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 307828 308265 . - . ID=gene-CCO34_RS05625;Name=CCO34_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05625;old_locus_tag=CCO34_05625 NZ_NPMD01000002.1 Protein Homology CDS 307828 308265 . - 0 ID=cds-WP_001038582.1;Parent=gene-CCO34_RS05625;Dbxref=GenBank:WP_001038582.1;Name=WP_001038582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=CCO34_RS05625;product=STM0539 family protein;protein_id=WP_001038582.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 308258 308803 . - . ID=gene-CCO34_RS05630;Name=CCO34_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05630;old_locus_tag=CCO34_05630 NZ_NPMD01000002.1 Protein Homology CDS 308258 308803 . - 0 ID=cds-WP_001143507.1;Parent=gene-CCO34_RS05630;Dbxref=GenBank:WP_001143507.1;Name=WP_001143507.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=CCO34_RS05630;product=metal-dependent hydrolase;protein_id=WP_001143507.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 308930 309142 . - . ID=gene-CCO34_RS05635;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=CCO34_RS05635;old_locus_tag=CCO34_05635 NZ_NPMD01000002.1 Protein Homology CDS 308930 309142 . - 0 ID=cds-WP_000190278.1;Parent=gene-CCO34_RS05635;Dbxref=GenBank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=CCO34_RS05635;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 309144 310010 . - . ID=gene-CCO34_RS05640;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CCO34_RS05640;old_locus_tag=CCO34_05640 NZ_NPMD01000002.1 Protein Homology CDS 309144 310010 . - 0 ID=cds-WP_000729165.1;Parent=gene-CCO34_RS05640;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=CCO34_RS05640;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 310557 311114 . + . ID=gene-CCO34_RS05650;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=CCO34_RS05650;old_locus_tag=CCO34_05650 NZ_NPMD01000002.1 Protein Homology CDS 310557 311114 . + 0 ID=cds-WP_000875671.1;Parent=gene-CCO34_RS05650;Dbxref=GenBank:WP_000875671.1;Name=WP_000875671.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=CCO34_RS05650;product=type 1 fimbrial protein subunit FimA;protein_id=WP_000875671.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 311189 311722 . + . ID=gene-CCO34_RS05655;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=CCO34_RS05655;old_locus_tag=CCO34_05655 NZ_NPMD01000002.1 Protein Homology CDS 311189 311722 . + 0 ID=cds-WP_000619624.1;Parent=gene-CCO34_RS05655;Dbxref=GenBank:WP_000619624.1;Name=WP_000619624.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=CCO34_RS05655;product=type 1 fimbrial protein subunit FimI;protein_id=WP_000619624.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 311766 312458 . + . ID=gene-CCO34_RS05660;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=CCO34_RS05660;old_locus_tag=CCO34_05660 NZ_NPMD01000002.1 Protein Homology CDS 311766 312458 . + 0 ID=cds-WP_023228626.1;Parent=gene-CCO34_RS05660;Dbxref=GenBank:WP_023228626.1;Name=WP_023228626.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=CCO34_RS05660;product=type 1 fimbria chaperone FimC;protein_id=WP_023228626.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 312489 315101 . + . ID=gene-CCO34_RS05665;Name=CCO34_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05665;old_locus_tag=CCO34_05665 NZ_NPMD01000002.1 Protein Homology CDS 312489 315101 . + 0 ID=cds-WP_000754213.1;Parent=gene-CCO34_RS05665;Dbxref=GenBank:WP_000754213.1;Name=WP_000754213.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=CCO34_RS05665;product=fimbrial biogenesis usher protein;protein_id=WP_000754213.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 315116 316123 . + . ID=gene-CCO34_RS05670;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=CCO34_RS05670;old_locus_tag=CCO34_05670 NZ_NPMD01000002.1 Protein Homology CDS 315116 316123 . + 0 ID=cds-WP_000708669.1;Parent=gene-CCO34_RS05670;Dbxref=GenBank:WP_000708669.1;Name=WP_000708669.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=CCO34_RS05670;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000708669.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 316133 316651 . + . ID=gene-CCO34_RS05675;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=CCO34_RS05675;old_locus_tag=CCO34_05675 NZ_NPMD01000002.1 Protein Homology CDS 316133 316651 . + 0 ID=cds-WP_000577505.1;Parent=gene-CCO34_RS05675;Dbxref=GenBank:WP_000577505.1;Name=WP_000577505.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=CCO34_RS05675;product=fimbria assembly protein;protein_id=WP_000577505.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 316697 317329 . - . ID=gene-CCO34_RS05680;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=CCO34_RS05680;old_locus_tag=CCO34_05680 NZ_NPMD01000002.1 Protein Homology CDS 316697 317329 . - 0 ID=cds-WP_000801272.1;Parent=gene-CCO34_RS05680;Dbxref=GenBank:WP_000801272.1;Name=WP_000801272.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=CCO34_RS05680;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801272.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 317933 318655 . - . ID=gene-CCO34_RS05685;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=CCO34_RS05685;old_locus_tag=CCO34_05685 NZ_NPMD01000002.1 Protein Homology CDS 317933 318655 . - 0 ID=cds-WP_001258125.1;Parent=gene-CCO34_RS05685;Dbxref=GenBank:WP_001258125.1;Name=WP_001258125.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=CCO34_RS05685;product=fimbria biosynthesis regulator FimY;protein_id=WP_001258125.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 318674 318985 . - . ID=gene-CCO34_RS05690;Name=CCO34_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05690;old_locus_tag=CCO34_05690 NZ_NPMD01000002.1 Protein Homology CDS 318674 318985 . - 0 ID=cds-WP_000226492.1;Parent=gene-CCO34_RS05690;Dbxref=GenBank:WP_000226492.1;Name=WP_000226492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=CCO34_RS05690;product=hypothetical protein;protein_id=WP_000226492.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 319147 319743 . - . ID=gene-CCO34_RS05695;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=CCO34_RS05695;old_locus_tag=CCO34_05695 NZ_NPMD01000002.1 Protein Homology CDS 319147 319743 . - 0 ID=cds-WP_000948629.1;Parent=gene-CCO34_RS05695;Dbxref=GenBank:WP_000948629.1;Name=WP_000948629.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=CCO34_RS05695;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_000948629.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 319998 320074 . + . ID=gene-CCO34_RS05705;Name=CCO34_RS05705;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS05705;old_locus_tag=CCO34_05705 NZ_NPMD01000002.1 tRNAscan-SE tRNA 319998 320074 . + . ID=rna-CCO34_RS05705;Parent=gene-CCO34_RS05705;anticodon=(pos:320032..320034);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS05705;product=tRNA-Arg NZ_NPMD01000002.1 tRNAscan-SE exon 319998 320074 . + . ID=exon-CCO34_RS05705-1;Parent=rna-CCO34_RS05705;anticodon=(pos:320032..320034);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS05705;product=tRNA-Arg NZ_NPMD01000002.1 RefSeq pseudogene 320235 320333 . - . ID=gene-CCO34_RS25750;Name=CCO34_RS25750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25750;partial=true;pseudo=true;start_range=.,320235 NZ_NPMD01000002.1 Protein Homology CDS 320235 320333 . - 0 ID=cds-CCO34_RS25750;Parent=gene-CCO34_RS25750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920046.1;locus_tag=CCO34_RS25750;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,320235;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 320355 320669 . - . ID=gene-CCO34_RS26170;Name=CCO34_RS26170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26170;old_locus_tag=CCO34_05710;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 320355 320669 . - 0 ID=cds-CCO34_RS26170;Parent=gene-CCO34_RS26170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248831.1;locus_tag=CCO34_RS26170;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 321105 322916 . - . ID=gene-CCO34_RS05715;Name=CCO34_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05715;old_locus_tag=CCO34_05715 NZ_NPMD01000002.1 Protein Homology CDS 321105 322916 . - 0 ID=cds-WP_000162128.1;Parent=gene-CCO34_RS05715;Dbxref=GenBank:WP_000162128.1;Name=WP_000162128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162125.1;locus_tag=CCO34_RS05715;product=hypothetical protein;protein_id=WP_000162128.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 322913 323833 . - . ID=gene-CCO34_RS05720;Name=CCO34_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05720;old_locus_tag=CCO34_05720 NZ_NPMD01000002.1 Protein Homology CDS 322913 323833 . - 0 ID=cds-WP_000703643.1;Parent=gene-CCO34_RS05720;Dbxref=GenBank:WP_000703643.1;Name=WP_000703643.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=CCO34_RS05720;product=glycosyltransferase family 2 protein;protein_id=WP_000703643.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 323830 324192 . - . ID=gene-CCO34_RS05725;Name=CCO34_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05725;old_locus_tag=CCO34_05725 NZ_NPMD01000002.1 Protein Homology CDS 323830 324192 . - 0 ID=cds-WP_000915520.1;Parent=gene-CCO34_RS05725;Dbxref=GenBank:WP_000915520.1;Name=WP_000915520.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=CCO34_RS05725;product=GtrA family protein;protein_id=WP_000915520.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 325062 325436 . - . ID=gene-CCO34_RS05735;Name=CCO34_RS05735;end_range=325436,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS05735;old_locus_tag=CCO34_05735;partial=true;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 325062 325436 . - 0 ID=cds-CCO34_RS05735;Parent=gene-CCO34_RS05735;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=325436,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=CCO34_RS05735;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 325440 325679 . + . ID=gene-CCO34_RS05740;Name=CCO34_RS05740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS05740;old_locus_tag=CCO34_05740;partial=true;pseudo=true;start_range=.,325440 NZ_NPMD01000002.1 Protein Homology CDS 325440 325679 . + 0 ID=cds-CCO34_RS05740;Parent=gene-CCO34_RS05740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=CCO34_RS05740;partial=true;product=efflux RND transporter permease subunit;pseudo=true;start_range=.,325440;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 325730 326584 . - . ID=gene-CCO34_RS05745;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=CCO34_RS05745;old_locus_tag=CCO34_05745 NZ_NPMD01000002.1 Protein Homology CDS 325730 326584 . - 0 ID=cds-WP_000339626.1;Parent=gene-CCO34_RS05745;Dbxref=GenBank:WP_000339626.1;Name=WP_000339626.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=CCO34_RS05745;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339626.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 326800 328125 . + . ID=gene-CCO34_RS05750;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=CCO34_RS05750;old_locus_tag=CCO34_05750 NZ_NPMD01000002.1 Protein Homology CDS 326800 328125 . + 0 ID=cds-WP_000195929.1;Parent=gene-CCO34_RS05750;Dbxref=GenBank:WP_000195929.1;Name=WP_000195929.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=CCO34_RS05750;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_000195929.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 328282 328518 . + . ID=gene-CCO34_RS05755;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=CCO34_RS05755;old_locus_tag=CCO34_05755 NZ_NPMD01000002.1 Protein Homology CDS 328282 328518 . + 0 ID=cds-WP_000922170.1;Parent=gene-CCO34_RS05755;Dbxref=GenBank:WP_000922170.1;Name=WP_000922170.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=CCO34_RS05755;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922170.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 328531 329091 . + . ID=gene-CCO34_RS05760;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=CCO34_RS05760;old_locus_tag=CCO34_05760 NZ_NPMD01000002.1 Protein Homology CDS 328531 329091 . + 0 ID=cds-WP_000362181.1;Parent=gene-CCO34_RS05760;Dbxref=GenBank:WP_000362181.1;Name=WP_000362181.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=CCO34_RS05760;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362181.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 329170 330345 . - . ID=gene-CCO34_RS05765;Name=CCO34_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05765;old_locus_tag=CCO34_05765 NZ_NPMD01000002.1 Protein Homology CDS 329170 330345 . - 0 ID=cds-WP_001033457.1;Parent=gene-CCO34_RS05765;Dbxref=GenBank:WP_001033457.1;Name=WP_001033457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=CCO34_RS05765;product=DnaJ family molecular chaperone;protein_id=WP_001033457.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 330671 332065 . + . ID=gene-CCO34_RS05770;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=CCO34_RS05770;old_locus_tag=CCO34_05770 NZ_NPMD01000002.1 Protein Homology CDS 330671 332065 . + 0 ID=cds-WP_000786296.1;Parent=gene-CCO34_RS05770;Dbxref=GenBank:WP_000786296.1;Name=WP_000786296.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=CCO34_RS05770;product=phenylalanine transporter;protein_id=WP_000786296.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 332107 333354 . - . ID=gene-CCO34_RS05775;Name=CCO34_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05775;old_locus_tag=CCO34_05775 NZ_NPMD01000002.1 Protein Homology CDS 332107 333354 . - 0 ID=cds-WP_001156971.1;Parent=gene-CCO34_RS05775;Dbxref=GenBank:WP_001156971.1;Name=WP_001156971.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=CCO34_RS05775;product=mechanosensitive ion channel family protein;protein_id=WP_001156971.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 333665 335635 . + . ID=gene-CCO34_RS05785;Name=CCO34_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05785;old_locus_tag=CCO34_05785 NZ_NPMD01000002.1 Protein Homology CDS 333665 335635 . + 0 ID=cds-WP_000192425.1;Parent=gene-CCO34_RS05785;Dbxref=GenBank:WP_000192425.1;Name=WP_000192425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=CCO34_RS05785;product=autotransporter domain-containing esterase;protein_id=WP_000192425.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 335802 338531 . + . ID=gene-CCO34_RS05790;Name=CCO34_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05790;old_locus_tag=CCO34_05790 NZ_NPMD01000002.1 Protein Homology CDS 335802 338531 . + 0 ID=cds-WP_001031460.1;Parent=gene-CCO34_RS05790;Dbxref=GenBank:WP_001031460.1;Name=WP_001031460.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=CCO34_RS05790;product=sigma 54-interacting transcriptional regulator;protein_id=WP_001031460.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 338659 339645 . - . ID=gene-CCO34_RS05795;Name=CCO34_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05795;old_locus_tag=CCO34_05795 NZ_NPMD01000002.1 Protein Homology CDS 338659 339645 . - 0 ID=cds-WP_000109360.1;Parent=gene-CCO34_RS05795;Dbxref=GenBank:WP_000109360.1;Name=WP_000109360.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459564.1;locus_tag=CCO34_RS05795;product=SIS domain-containing protein;protein_id=WP_000109360.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 339712 340755 . - . ID=gene-CCO34_RS05800;Name=CCO34_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05800;old_locus_tag=CCO34_05800 NZ_NPMD01000002.1 Protein Homology CDS 339712 340755 . - 0 ID=cds-WP_010988979.1;Parent=gene-CCO34_RS05800;Dbxref=GenBank:WP_010988979.1;Name=WP_010988979.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459565.1;locus_tag=CCO34_RS05800;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=WP_010988979.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 340788 341642 . - . ID=gene-CCO34_RS05805;Name=CCO34_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05805;old_locus_tag=CCO34_05805 NZ_NPMD01000002.1 Protein Homology CDS 340788 341642 . - 0 ID=cds-WP_000005803.1;Parent=gene-CCO34_RS05805;Dbxref=GenBank:WP_000005803.1;Name=WP_000005803.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459566.1;locus_tag=CCO34_RS05805;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000005803.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 341645 342388 . - . ID=gene-CCO34_RS05810;Name=CCO34_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05810;old_locus_tag=CCO34_05810 NZ_NPMD01000002.1 Protein Homology CDS 341645 342388 . - 0 ID=cds-WP_094965407.1;Parent=gene-CCO34_RS05810;Dbxref=GenBank:WP_094965407.1;Name=WP_094965407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459567.1;locus_tag=CCO34_RS05810;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_094965407.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 342403 342873 . - . ID=gene-CCO34_RS05815;Name=CCO34_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05815;old_locus_tag=CCO34_05815 NZ_NPMD01000002.1 Protein Homology CDS 342403 342873 . - 0 ID=cds-WP_000594178.1;Parent=gene-CCO34_RS05815;Dbxref=GenBank:WP_000594178.1;Name=WP_000594178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459568.1;locus_tag=CCO34_RS05815;product=PTS sugar transporter subunit IIB;protein_id=WP_000594178.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 342851 343300 . - . ID=gene-CCO34_RS05820;Name=CCO34_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05820;old_locus_tag=CCO34_05820 NZ_NPMD01000002.1 Protein Homology CDS 342851 343300 . - 0 ID=cds-WP_001216659.1;Parent=gene-CCO34_RS05820;Dbxref=GenBank:WP_001216659.1;Name=WP_001216659.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459569.1;locus_tag=CCO34_RS05820;product=PTS sugar transporter subunit IIA;protein_id=WP_001216659.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 343500 344153 . - . ID=gene-CCO34_RS05825;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=CCO34_RS05825;old_locus_tag=CCO34_05825 NZ_NPMD01000002.1 Protein Homology CDS 343500 344153 . - 0 ID=cds-WP_000355879.1;Parent=gene-CCO34_RS05825;Dbxref=GenBank:WP_000355879.1;Name=WP_000355879.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=CCO34_RS05825;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000355879.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 344250 344618 . - . ID=gene-CCO34_RS05830;Name=CCO34_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05830;old_locus_tag=CCO34_05830 NZ_NPMD01000002.1 Protein Homology CDS 344250 344618 . - 0 ID=cds-WP_000348999.1;Parent=gene-CCO34_RS05830;Dbxref=GenBank:WP_000348999.1;Name=WP_000348999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=CCO34_RS05830;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348999.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 344618 345199 . - . ID=gene-CCO34_RS05835;Name=CCO34_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05835;old_locus_tag=CCO34_05835 NZ_NPMD01000002.1 Protein Homology CDS 344618 345199 . - 0 ID=cds-WP_000113609.1;Parent=gene-CCO34_RS05835;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=CCO34_RS05835;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 345488 345829 . + . ID=gene-CCO34_RS05840;Name=CCO34_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05840;old_locus_tag=CCO34_05840 NZ_NPMD01000002.1 Protein Homology CDS 345488 345829 . + 0 ID=cds-WP_000155633.1;Parent=gene-CCO34_RS05840;Dbxref=GenBank:WP_000155633.1;Name=WP_000155633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=CCO34_RS05840;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155633.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 345835 346083 . - . ID=gene-CCO34_RS05845;Name=CCO34_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05845;old_locus_tag=CCO34_05845 NZ_NPMD01000002.1 Protein Homology CDS 345835 346083 . - 0 ID=cds-WP_000682497.1;Parent=gene-CCO34_RS05845;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=CCO34_RS05845;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 346150 347268 . - . ID=gene-CCO34_RS05850;Name=CCO34_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05850;old_locus_tag=CCO34_05850 NZ_NPMD01000002.1 Protein Homology CDS 346150 347268 . - 0 ID=cds-WP_001196908.1;Parent=gene-CCO34_RS05850;Dbxref=GenBank:WP_001196908.1;Name=WP_001196908.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=CCO34_RS05850;product=YbdK family carboxylate-amine ligase;protein_id=WP_001196908.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 347280 347984 . - . ID=gene-CCO34_RS05855;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=CCO34_RS05855;old_locus_tag=CCO34_05855 NZ_NPMD01000002.1 Protein Homology CDS 347280 347984 . - 0 ID=cds-WP_001260572.1;Parent=gene-CCO34_RS05855;Dbxref=GenBank:WP_001260572.1;Name=WP_001260572.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=CCO34_RS05855;product=enterobactin synthase subunit EntD;protein_id=WP_001260572.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 348031 350286 . - . ID=gene-CCO34_RS05860;Name=CCO34_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05860;old_locus_tag=CCO34_05860 NZ_NPMD01000002.1 Protein Homology CDS 348031 350286 . - 0 ID=cds-WP_001034965.1;Parent=gene-CCO34_RS05860;Dbxref=GenBank:WP_001034965.1;Name=WP_001034965.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=CCO34_RS05860;product=TonB-dependent siderophore receptor;protein_id=WP_001034965.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 350475 351689 . + . ID=gene-CCO34_RS05865;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=CCO34_RS05865;old_locus_tag=CCO34_05865 NZ_NPMD01000002.1 Protein Homology CDS 350475 351689 . + 0 ID=cds-WP_000656596.1;Parent=gene-CCO34_RS05865;Dbxref=GenBank:WP_000656596.1;Name=WP_000656596.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=CCO34_RS05865;product=enterochelin esterase;protein_id=WP_000656596.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 351720 351938 . + . ID=gene-CCO34_RS05870;Name=CCO34_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05870;old_locus_tag=CCO34_05870 NZ_NPMD01000002.1 Protein Homology CDS 351720 351938 . + 0 ID=cds-WP_000396014.1;Parent=gene-CCO34_RS05870;Dbxref=GenBank:WP_000396014.1;Name=WP_000396014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=CCO34_RS05870;product=MbtH family protein;protein_id=WP_000396014.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 351935 355819 . + . ID=gene-CCO34_RS05875;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=CCO34_RS05875;old_locus_tag=CCO34_05875 NZ_NPMD01000002.1 Protein Homology CDS 351935 355819 . + 0 ID=cds-WP_023228679.1;Parent=gene-CCO34_RS05875;Dbxref=GenBank:WP_023228679.1;Name=WP_023228679.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=CCO34_RS05875;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_023228679.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 356069 357205 . + . ID=gene-CCO34_RS05880;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=CCO34_RS05880;old_locus_tag=CCO34_05880 NZ_NPMD01000002.1 Protein Homology CDS 356069 357205 . + 0 ID=cds-WP_001139585.1;Parent=gene-CCO34_RS05880;Dbxref=GenBank:WP_001139585.1;Name=WP_001139585.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=CCO34_RS05880;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_001139585.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 357258 358052 . - . ID=gene-CCO34_RS05885;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=CCO34_RS05885;old_locus_tag=CCO34_05885 NZ_NPMD01000002.1 Protein Homology CDS 357258 358052 . - 0 ID=cds-WP_000140620.1;Parent=gene-CCO34_RS05885;Dbxref=GenBank:WP_000140620.1;Name=WP_000140620.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=CCO34_RS05885;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140620.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 358049 359038 . - . ID=gene-CCO34_RS05890;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=CCO34_RS05890;old_locus_tag=CCO34_05890 NZ_NPMD01000002.1 Protein Homology CDS 358049 359038 . - 0 ID=cds-WP_000480064.1;Parent=gene-CCO34_RS05890;Dbxref=GenBank:WP_000480064.1;Name=WP_000480064.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=CCO34_RS05890;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480064.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 359038 360045 . - . ID=gene-CCO34_RS05895;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=CCO34_RS05895;old_locus_tag=CCO34_05895 NZ_NPMD01000002.1 Protein Homology CDS 359038 360045 . - 0 ID=cds-WP_001277879.1;Parent=gene-CCO34_RS05895;Dbxref=GenBank:WP_001277879.1;Name=WP_001277879.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=CCO34_RS05895;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277879.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 360156 361400 . + . ID=gene-CCO34_RS05900;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=CCO34_RS05900;old_locus_tag=CCO34_05900 NZ_NPMD01000002.1 Protein Homology CDS 360156 361400 . + 0 ID=cds-WP_094965408.1;Parent=gene-CCO34_RS05900;Dbxref=GenBank:WP_094965408.1;Name=WP_094965408.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=CCO34_RS05900;product=enterobactin transporter EntS;protein_id=WP_094965408.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 361463 362419 . - . ID=gene-CCO34_RS05905;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=CCO34_RS05905;old_locus_tag=CCO34_05905 NZ_NPMD01000002.1 Protein Homology CDS 361463 362419 . - 0 ID=cds-WP_001238983.1;Parent=gene-CCO34_RS05905;Dbxref=GenBank:WP_001238983.1;Name=WP_001238983.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=CCO34_RS05905;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001238983.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 362728 363903 . + . ID=gene-CCO34_RS05910;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=CCO34_RS05910;old_locus_tag=CCO34_05910 NZ_NPMD01000002.1 Protein Homology CDS 362728 363903 . + 0 ID=cds-WP_000367594.1;Parent=gene-CCO34_RS05910;Dbxref=GenBank:WP_000367594.1;Name=WP_000367594.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=CCO34_RS05910;product=isochorismate synthase EntC;protein_id=WP_000367594.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 363913 365523 . + . ID=gene-CCO34_RS05915;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=CCO34_RS05915;old_locus_tag=CCO34_05915 NZ_NPMD01000002.1 Protein Homology CDS 363913 365523 . + 0 ID=cds-WP_001222447.1;Parent=gene-CCO34_RS05915;Dbxref=GenBank:WP_001222447.1;Name=WP_001222447.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=CCO34_RS05915;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_001222447.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 365537 366394 . + . ID=gene-CCO34_RS05920;Name=CCO34_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05920;old_locus_tag=CCO34_05920 NZ_NPMD01000002.1 Protein Homology CDS 365537 366394 . + 0 ID=cds-WP_001007166.1;Parent=gene-CCO34_RS05920;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=CCO34_RS05920;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 366394 367149 . + . ID=gene-CCO34_RS05925;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=CCO34_RS05925;old_locus_tag=CCO34_05925 NZ_NPMD01000002.1 Protein Homology CDS 366394 367149 . + 0 ID=cds-WP_001112171.1;Parent=gene-CCO34_RS05925;Dbxref=GenBank:WP_001112171.1;Name=WP_001112171.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=CCO34_RS05925;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_001112171.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 367152 367565 . + . ID=gene-CCO34_RS05930;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=CCO34_RS05930;old_locus_tag=CCO34_05930 NZ_NPMD01000002.1 Protein Homology CDS 367152 367565 . + 0 ID=cds-WP_000637966.1;Parent=gene-CCO34_RS05930;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=CCO34_RS05930;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 367747 369852 . + . ID=gene-CCO34_RS05935;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=CCO34_RS05935;old_locus_tag=CCO34_05935 NZ_NPMD01000002.1 Protein Homology CDS 367747 369852 . + 0 ID=cds-WP_001043108.1;Parent=gene-CCO34_RS05935;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=CCO34_RS05935;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 369916 370113 . + . ID=gene-CCO34_RS05940;Name=CCO34_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05940;old_locus_tag=CCO34_05940 NZ_NPMD01000002.1 Protein Homology CDS 369916 370113 . + 0 ID=cds-WP_094965409.1;Parent=gene-CCO34_RS05940;Dbxref=GenBank:WP_094965409.1;Name=WP_094965409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=CCO34_RS05940;product=YbdD/YjiX family protein;protein_id=WP_094965409.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 370149 371237 . - . ID=gene-CCO34_RS05945;Name=CCO34_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05945;old_locus_tag=CCO34_05945 NZ_NPMD01000002.1 Protein Homology CDS 370149 371237 . - 0 ID=cds-WP_001016849.1;Parent=gene-CCO34_RS05945;Dbxref=GenBank:WP_001016849.1;Name=WP_001016849.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=CCO34_RS05945;product=oxidoreductase;protein_id=WP_001016849.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 371364 372524 . + . ID=gene-CCO34_RS05950;Name=CCO34_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05950;old_locus_tag=CCO34_05950 NZ_NPMD01000002.1 Protein Homology CDS 371364 372524 . + 0 ID=cds-WP_001245595.1;Parent=gene-CCO34_RS05950;Dbxref=GenBank:WP_001245595.1;Name=WP_001245595.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=CCO34_RS05950;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_001245595.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 372525 373142 . - . ID=gene-CCO34_RS05955;Name=CCO34_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05955;old_locus_tag=CCO34_05955 NZ_NPMD01000002.1 Protein Homology CDS 372525 373142 . - 0 ID=cds-WP_001164756.1;Parent=gene-CCO34_RS05955;Dbxref=GenBank:WP_001164756.1;Name=WP_001164756.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=CCO34_RS05955;product=IbrB-like domain-containing protein;protein_id=WP_001164756.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 373115 374350 . - . ID=gene-CCO34_RS05960;Name=CCO34_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05960;old_locus_tag=CCO34_05960 NZ_NPMD01000002.1 Protein Homology CDS 373115 374350 . - 0 ID=cds-WP_000118144.1;Parent=gene-CCO34_RS05960;Dbxref=GenBank:WP_000118144.1;Name=WP_000118144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=CCO34_RS05960;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118144.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 374516 375418 . - . ID=gene-CCO34_RS05965;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;locus_tag=CCO34_RS05965;old_locus_tag=CCO34_05965 NZ_NPMD01000002.1 Protein Homology CDS 374516 375418 . - 0 ID=cds-WP_094965410.1;Parent=gene-CCO34_RS05965;Dbxref=GenBank:WP_094965410.1;Name=WP_094965410.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=CCO34_RS05965;product=DNA-binding transcriptional repressor CitR;protein_id=WP_094965410.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 375735 376481 . - . ID=gene-CCO34_RS05975;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=CCO34_RS05975;old_locus_tag=CCO34_05975 NZ_NPMD01000002.1 Protein Homology CDS 375735 376481 . - 0 ID=cds-WP_000597122.1;Parent=gene-CCO34_RS05975;Dbxref=GenBank:WP_000597122.1;Name=WP_000597122.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=CCO34_RS05975;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000597122.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 376922 377485 . + . ID=gene-CCO34_RS05980;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CCO34_RS05980;old_locus_tag=CCO34_05980 NZ_NPMD01000002.1 Protein Homology CDS 376922 377485 . + 0 ID=cds-WP_000052802.1;Parent=gene-CCO34_RS05980;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=CCO34_RS05980;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 377727 379292 . + . ID=gene-CCO34_RS05985;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CCO34_RS05985;old_locus_tag=CCO34_05985 NZ_NPMD01000002.1 Protein Homology CDS 377727 379292 . + 0 ID=cds-WP_000887634.1;Parent=gene-CCO34_RS05985;Dbxref=GenBank:WP_000887634.1;Name=WP_000887634.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=CCO34_RS05985;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887634.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 379625 380185 . + . ID=gene-CCO34_RS05990;Name=CCO34_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05990;old_locus_tag=CCO34_05990 NZ_NPMD01000002.1 Protein Homology CDS 379625 380185 . + 0 ID=cds-WP_000377433.1;Parent=gene-CCO34_RS05990;Dbxref=GenBank:WP_000377433.1;Name=WP_000377433.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=CCO34_RS05990;product=TorD/DmsD family molecular chaperone;protein_id=WP_000377433.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 380178 382457 . + . ID=gene-CCO34_RS05995;Name=CCO34_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS05995;old_locus_tag=CCO34_05995 NZ_NPMD01000002.1 Protein Homology CDS 380178 382457 . + 0 ID=cds-WP_000064332.1;Parent=gene-CCO34_RS05995;Dbxref=GenBank:WP_000064332.1;Name=WP_000064332.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=CCO34_RS05995;product=molybdopterin-dependent oxidoreductase;protein_id=WP_000064332.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 382454 383011 . + . ID=gene-CCO34_RS06000;Name=CCO34_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06000;old_locus_tag=CCO34_06000 NZ_NPMD01000002.1 Protein Homology CDS 382454 383011 . + 0 ID=cds-WP_001250381.1;Parent=gene-CCO34_RS06000;Dbxref=GenBank:WP_001250381.1;Name=WP_001250381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=CCO34_RS06000;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250381.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 383011 383778 . + . ID=gene-CCO34_RS06005;Name=CCO34_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06005;old_locus_tag=CCO34_06005 NZ_NPMD01000002.1 Protein Homology CDS 383011 383778 . + 0 ID=cds-WP_000417092.1;Parent=gene-CCO34_RS06005;Dbxref=GenBank:WP_000417092.1;Name=WP_000417092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=CCO34_RS06005;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000417092.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 383846 384274 . - . ID=gene-CCO34_RS06010;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=CCO34_RS06010;old_locus_tag=CCO34_06010 NZ_NPMD01000002.1 Protein Homology CDS 383846 384274 . - 0 ID=cds-WP_000278499.1;Parent=gene-CCO34_RS06010;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=CCO34_RS06010;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 384497 385735 . + . ID=gene-CCO34_RS06015;Name=CCO34_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06015;old_locus_tag=CCO34_06015 NZ_NPMD01000002.1 Protein Homology CDS 384497 385735 . + 0 ID=cds-WP_000646110.1;Parent=gene-CCO34_RS06015;Dbxref=GenBank:WP_000646110.1;Name=WP_000646110.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=CCO34_RS06015;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646110.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 385820 386230 . - . ID=gene-CCO34_RS06020;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=CCO34_RS06020;old_locus_tag=CCO34_06020 NZ_NPMD01000002.1 Protein Homology CDS 385820 386230 . - 0 ID=cds-WP_000089748.1;Parent=gene-CCO34_RS06020;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=CCO34_RS06020;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 386465 387271 . - . ID=gene-CCO34_RS06030;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=CCO34_RS06030;old_locus_tag=CCO34_06030 NZ_NPMD01000002.1 Protein Homology CDS 386465 387271 . - 0 ID=cds-WP_001092581.1;Parent=gene-CCO34_RS06030;Dbxref=GenBank:WP_001092581.1;Name=WP_001092581.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=CCO34_RS06030;product=ribonuclease I;protein_id=WP_001092581.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 387381 388844 . - . ID=gene-CCO34_RS06035;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=CCO34_RS06035;old_locus_tag=CCO34_06035 NZ_NPMD01000002.1 Protein Homology CDS 387381 388844 . - 0 ID=cds-WP_000059029.1;Parent=gene-CCO34_RS06035;Dbxref=GenBank:WP_000059029.1;Name=WP_000059029.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=CCO34_RS06035;product=citrate/succinate antiporter CitT;protein_id=WP_000059029.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 388882 389778 . - . ID=gene-CCO34_RS06040;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO34_RS06040;old_locus_tag=CCO34_06040 NZ_NPMD01000002.1 Protein Homology CDS 388882 389778 . - 0 ID=cds-WP_000982661.1;Parent=gene-CCO34_RS06040;Dbxref=GenBank:WP_000982661.1;Name=WP_000982661.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=CCO34_RS06040;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982661.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 389750 390301 . - . ID=gene-CCO34_RS06045;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO34_RS06045;old_locus_tag=CCO34_06045 NZ_NPMD01000002.1 Protein Homology CDS 389750 390301 . - 0 ID=cds-WP_001236063.1;Parent=gene-CCO34_RS06045;Dbxref=GenBank:WP_001236063.1;Name=WP_001236063.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=CCO34_RS06045;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_001236063.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 390305 391834 . - . ID=gene-CCO34_RS06050;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO34_RS06050;old_locus_tag=CCO34_06050 NZ_NPMD01000002.1 Protein Homology CDS 390305 391834 . - 0 ID=cds-WP_020438214.1;Parent=gene-CCO34_RS06050;Dbxref=GenBank:WP_020438214.1;Name=WP_020438214.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=CCO34_RS06050;product=citrate lyase subunit alpha;protein_id=WP_020438214.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 391844 392752 . - . ID=gene-CCO34_RS06055;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO34_RS06055;old_locus_tag=CCO34_06055 NZ_NPMD01000002.1 Protein Homology CDS 391844 392752 . - 0 ID=cds-WP_000622342.1;Parent=gene-CCO34_RS06055;Dbxref=GenBank:WP_000622342.1;Name=WP_000622342.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=CCO34_RS06055;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622342.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 392749 393045 . - . ID=gene-CCO34_RS06060;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO34_RS06060;old_locus_tag=CCO34_06060 NZ_NPMD01000002.1 Protein Homology CDS 392749 393045 . - 0 ID=cds-WP_000700679.1;Parent=gene-CCO34_RS06060;Dbxref=GenBank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=CCO34_RS06060;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 393042 394118 . - . ID=gene-CCO34_RS06065;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO34_RS06065;old_locus_tag=CCO34_06065 NZ_NPMD01000002.1 Protein Homology CDS 393042 394118 . - 0 ID=cds-WP_000467872.1;Parent=gene-CCO34_RS06065;Dbxref=GenBank:WP_000467872.1;Name=WP_000467872.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=CCO34_RS06065;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467872.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 394503 396164 . + . ID=gene-CCO34_RS06070;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=CCO34_RS06070;old_locus_tag=CCO34_06070 NZ_NPMD01000002.1 Protein Homology CDS 394503 396164 . + 0 ID=cds-WP_076741467.1;Parent=gene-CCO34_RS06070;Dbxref=GenBank:WP_076741467.1;Name=WP_076741467.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=CCO34_RS06070;product=sensor histidine kinase DpiB;protein_id=WP_076741467.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 396133 396813 . + . ID=gene-CCO34_RS06075;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=CCO34_RS06075;old_locus_tag=CCO34_06075 NZ_NPMD01000002.1 Protein Homology CDS 396133 396813 . + 0 ID=cds-WP_000138778.1;Parent=gene-CCO34_RS06075;Dbxref=GenBank:WP_000138778.1;Name=WP_000138778.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=CCO34_RS06075;product=two-component response regulator DpiA;protein_id=WP_000138778.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 396867 398252 . - . ID=gene-CCO34_RS06080;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=CCO34_RS06080;old_locus_tag=CCO34_06080 NZ_NPMD01000002.1 Protein Homology CDS 396867 398252 . - 0 ID=cds-WP_000958619.1;Parent=gene-CCO34_RS06080;Dbxref=GenBank:WP_000958619.1;Name=WP_000958619.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=CCO34_RS06080;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000958619.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 398629 399201 . + . ID=gene-CCO34_RS06085;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=CCO34_RS06085;old_locus_tag=CCO34_06085 NZ_NPMD01000002.1 Protein Homology CDS 398629 399201 . + 0 ID=cds-WP_001623090.1;Parent=gene-CCO34_RS06085;Dbxref=GenBank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=CCO34_RS06085;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 399389 399598 . + . ID=gene-CCO34_RS06090;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO34_RS06090;old_locus_tag=CCO34_06090 NZ_NPMD01000002.1 Protein Homology CDS 399389 399598 . + 0 ID=cds-WP_000034826.1;Parent=gene-CCO34_RS06090;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=CCO34_RS06090;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 399656 400039 . - . ID=gene-CCO34_RS06095;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CCO34_RS06095;old_locus_tag=CCO34_06095 NZ_NPMD01000002.1 Protein Homology CDS 399656 400039 . - 0 ID=cds-WP_000939753.1;Parent=gene-CCO34_RS06095;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=CCO34_RS06095;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 400130 400918 . + . ID=gene-CCO34_RS06100;Name=CCO34_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06100;old_locus_tag=CCO34_06100 NZ_NPMD01000002.1 Protein Homology CDS 400130 400918 . + 0 ID=cds-WP_000495791.1;Parent=gene-CCO34_RS06100;Dbxref=GenBank:WP_000495791.1;Name=WP_000495791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=CCO34_RS06100;product=deaminated glutathione amidase;protein_id=WP_000495791.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 401047 401250 . + . ID=gene-CCO34_RS06105;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=CCO34_RS06105;old_locus_tag=CCO34_06105 NZ_NPMD01000002.1 Protein Homology CDS 401047 401250 . + 0 ID=cds-WP_000503938.1;Parent=gene-CCO34_RS06105;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=CCO34_RS06105;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 401336 402301 . - . ID=gene-CCO34_RS06110;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CCO34_RS06110;old_locus_tag=CCO34_06110 NZ_NPMD01000002.1 Protein Homology CDS 401336 402301 . - 0 ID=cds-WP_000042640.1;Parent=gene-CCO34_RS06110;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=CCO34_RS06110;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 402507 403460 . - . ID=gene-CCO34_RS06115;Name=CCO34_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06115;old_locus_tag=CCO34_06115 NZ_NPMD01000002.1 Protein Homology CDS 402507 403460 . - 0 ID=cds-WP_001282817.1;Parent=gene-CCO34_RS06115;Dbxref=GenBank:WP_001282817.1;Name=WP_001282817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=CCO34_RS06115;product=YbeF family transcriptional regulator;protein_id=WP_001282817.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 403762 404403 . - . ID=gene-CCO34_RS06120;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=CCO34_RS06120;old_locus_tag=CCO34_06120 NZ_NPMD01000002.1 Protein Homology CDS 403762 404403 . - 0 ID=cds-WP_000284005.1;Parent=gene-CCO34_RS06120;Dbxref=GenBank:WP_000284005.1;Name=WP_000284005.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=CCO34_RS06120;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284005.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 404503 404766 . - . ID=gene-CCO34_RS06125;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=CCO34_RS06125;old_locus_tag=CCO34_06125 NZ_NPMD01000002.1 Protein Homology CDS 404503 404766 . - 0 ID=cds-WP_000850547.1;Parent=gene-CCO34_RS06125;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=CCO34_RS06125;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 404874 406085 . - . ID=gene-CCO34_RS06130;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=CCO34_RS06130;old_locus_tag=CCO34_06130 NZ_NPMD01000002.1 Protein Homology CDS 404874 406085 . - 0 ID=cds-WP_000858711.1;Parent=gene-CCO34_RS06130;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=CCO34_RS06130;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 406225 407358 . - . ID=gene-CCO34_RS06135;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=CCO34_RS06135;old_locus_tag=CCO34_06135 NZ_NPMD01000002.1 Protein Homology CDS 406225 407358 . - 0 ID=cds-WP_094965411.1;Parent=gene-CCO34_RS06135;Dbxref=GenBank:WP_094965411.1;Name=WP_094965411.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=CCO34_RS06135;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_094965411.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 407369 408481 . - . ID=gene-CCO34_RS06140;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=CCO34_RS06140;old_locus_tag=CCO34_06140 NZ_NPMD01000002.1 Protein Homology CDS 407369 408481 . - 0 ID=cds-WP_000131713.1;Parent=gene-CCO34_RS06140;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=CCO34_RS06140;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 408484 410385 . - . ID=gene-CCO34_RS06145;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO34_RS06145;old_locus_tag=CCO34_06145 NZ_NPMD01000002.1 Protein Homology CDS 408484 410385 . - 0 ID=cds-WP_000828700.1;Parent=gene-CCO34_RS06145;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=CCO34_RS06145;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 410416 410883 . - . ID=gene-CCO34_RS06150;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CCO34_RS06150;old_locus_tag=CCO34_06150 NZ_NPMD01000002.1 Protein Homology CDS 410416 410883 . - 0 ID=cds-WP_000776107.1;Parent=gene-CCO34_RS06150;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=CCO34_RS06150;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 410887 411204 . - . ID=gene-CCO34_RS06155;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CCO34_RS06155;old_locus_tag=CCO34_06155 NZ_NPMD01000002.1 Protein Homology CDS 410887 411204 . - 0 ID=cds-WP_001161670.1;Parent=gene-CCO34_RS06155;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=CCO34_RS06155;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 411533 412141 . - . ID=gene-CCO34_RS06160;Name=CCO34_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06160;old_locus_tag=CCO34_06160 NZ_NPMD01000002.1 Protein Homology CDS 411533 412141 . - 0 ID=cds-WP_001241918.1;Parent=gene-CCO34_RS06160;Dbxref=GenBank:WP_001241918.1;Name=WP_001241918.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=CCO34_RS06160;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241918.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 412238 413332 . + . ID=gene-CCO34_RS06165;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=CCO34_RS06165;old_locus_tag=CCO34_06165 NZ_NPMD01000002.1 Protein Homology CDS 412238 413332 . + 0 ID=cds-WP_001173260.1;Parent=gene-CCO34_RS06165;Dbxref=GenBank:WP_001173260.1;Name=WP_001173260.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=CCO34_RS06165;product=threonine-phosphate decarboxylase CobD;protein_id=WP_001173260.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 413307 413948 . - . ID=gene-CCO34_RS06170;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CCO34_RS06170;old_locus_tag=CCO34_06170 NZ_NPMD01000002.1 Protein Homology CDS 413307 413948 . - 0 ID=cds-WP_001518902.1;Parent=gene-CCO34_RS06170;Dbxref=GenBank:WP_001518902.1;Name=WP_001518902.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=CCO34_RS06170;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001518902.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 413950 414981 . - . ID=gene-CCO34_RS06175;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CCO34_RS06175;old_locus_tag=CCO34_06175 NZ_NPMD01000002.1 Protein Homology CDS 413950 414981 . - 0 ID=cds-WP_000620494.1;Parent=gene-CCO34_RS06175;Dbxref=GenBank:WP_000620494.1;Name=WP_000620494.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=CCO34_RS06175;product=DNA polymerase III subunit delta;protein_id=WP_000620494.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 414981 415571 . - . ID=gene-CCO34_RS06180;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=CCO34_RS06180;old_locus_tag=CCO34_06180 NZ_NPMD01000002.1 Protein Homology CDS 414981 415571 . - 0 ID=cds-WP_001269950.1;Parent=gene-CCO34_RS06180;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=CCO34_RS06180;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 415586 418168 . - . ID=gene-CCO34_RS06185;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CCO34_RS06185;old_locus_tag=CCO34_06185 NZ_NPMD01000002.1 Protein Homology CDS 415586 418168 . - 0 ID=cds-WP_001157919.1;Parent=gene-CCO34_RS06185;Dbxref=GenBank:WP_001157919.1;Name=WP_001157919.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=CCO34_RS06185;product=leucine--tRNA ligase;protein_id=WP_001157919.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 418405 418746 . + . ID=gene-CCO34_RS06190;Name=CCO34_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06190;old_locus_tag=CCO34_06190 NZ_NPMD01000002.1 Protein Homology CDS 418405 418746 . + 0 ID=cds-WP_001574029.1;Parent=gene-CCO34_RS06190;Dbxref=GenBank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=CCO34_RS06190;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 418763 419935 . + . ID=gene-CCO34_RS06195;Name=CCO34_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06195;old_locus_tag=CCO34_06195 NZ_NPMD01000002.1 Protein Homology CDS 418763 419935 . + 0 ID=cds-WP_001670689.1;Parent=gene-CCO34_RS06195;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=CCO34_RS06195;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 419985 420938 . + . ID=gene-CCO34_RS06200;Name=CCO34_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06200;old_locus_tag=CCO34_06200 NZ_NPMD01000002.1 Protein Homology CDS 419985 420938 . + 0 ID=cds-WP_000694477.1;Parent=gene-CCO34_RS06200;Dbxref=GenBank:WP_000694477.1;Name=WP_000694477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=CCO34_RS06200;product=2-keto-3-deoxygluconate permease;protein_id=WP_000694477.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 421006 422934 . + . ID=gene-CCO34_RS06205;Name=CCO34_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06205;old_locus_tag=CCO34_06205 NZ_NPMD01000002.1 Protein Homology CDS 421006 422934 . + 0 ID=cds-WP_001044184.1;Parent=gene-CCO34_RS06205;Dbxref=GenBank:WP_001044184.1;Name=WP_001044184.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=CCO34_RS06205;product=sigma-54 interaction domain-containing protein;protein_id=WP_001044184.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 423027 423500 . + . ID=gene-CCO34_RS06210;Name=CCO34_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06210;old_locus_tag=CCO34_06210 NZ_NPMD01000002.1 Protein Homology CDS 423027 423500 . + 0 ID=cds-WP_001044884.1;Parent=gene-CCO34_RS06210;Dbxref=GenBank:WP_001044884.1;Name=WP_001044884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=CCO34_RS06210;product=zinc ribbon-containing protein;protein_id=WP_001044884.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 423539 424534 . - . ID=gene-CCO34_RS06215;Name=CCO34_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06215;old_locus_tag=CCO34_06215 NZ_NPMD01000002.1 Protein Homology CDS 423539 424534 . - 0 ID=cds-WP_001016628.1;Parent=gene-CCO34_RS06215;Dbxref=GenBank:WP_001016628.1;Name=WP_001016628.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=CCO34_RS06215;product=tetratricopeptide repeat protein;protein_id=WP_001016628.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 424659 425366 . + . ID=gene-CCO34_RS06220;Name=CCO34_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06220;old_locus_tag=CCO34_06220 NZ_NPMD01000002.1 Protein Homology CDS 424659 425366 . + 0 ID=cds-WP_001531467.1;Parent=gene-CCO34_RS06220;Dbxref=GenBank:WP_001531467.1;Name=WP_001531467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=CCO34_RS06220;product=DUF1266 domain-containing protein;protein_id=WP_001531467.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 425363 426796 . + . ID=gene-CCO34_RS06225;Name=CCO34_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06225;old_locus_tag=CCO34_06225 NZ_NPMD01000002.1 Protein Homology CDS 425363 426796 . + 0 ID=cds-WP_000845213.1;Parent=gene-CCO34_RS06225;Dbxref=GenBank:WP_000845213.1;Name=WP_000845213.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=CCO34_RS06225;product=J domain-containing protein;protein_id=WP_000845213.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 426808 427503 . + . ID=gene-CCO34_RS06230;Name=CCO34_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06230;old_locus_tag=CCO34_06230 NZ_NPMD01000002.1 Protein Homology CDS 426808 427503 . + 0 ID=cds-WP_000356624.1;Parent=gene-CCO34_RS06230;Dbxref=GenBank:WP_000356624.1;Name=WP_000356624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=CCO34_RS06230;product=DUF1266 domain-containing protein;protein_id=WP_000356624.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 427500 428972 . + . ID=gene-CCO34_RS06235;Name=CCO34_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06235;old_locus_tag=CCO34_06235 NZ_NPMD01000002.1 Protein Homology CDS 427500 428972 . + 0 ID=cds-WP_001017759.1;Parent=gene-CCO34_RS06235;Dbxref=GenBank:WP_001017759.1;Name=WP_001017759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=CCO34_RS06235;product=J domain-containing protein;protein_id=WP_001017759.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 428994 430673 . - . ID=gene-CCO34_RS06240;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=CCO34_RS06240;old_locus_tag=CCO34_06240 NZ_NPMD01000002.1 Protein Homology CDS 428994 430673 . - 0 ID=cds-WP_000368024.1;Parent=gene-CCO34_RS06240;Dbxref=GenBank:WP_000368024.1;Name=WP_000368024.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=CCO34_RS06240;product=molecular chaperone HscC;protein_id=WP_000368024.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 430749 431987 . - . ID=gene-CCO34_RS06245;Name=CCO34_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06245;old_locus_tag=CCO34_06245 NZ_NPMD01000002.1 Protein Homology CDS 430749 431987 . - 0 ID=cds-WP_000498871.1;Parent=gene-CCO34_RS06245;Dbxref=GenBank:WP_000498871.1;Name=WP_000498871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=CCO34_RS06245;product=hypothetical protein;protein_id=WP_000498871.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 432019 432954 . - . ID=gene-CCO34_RS06250;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=CCO34_RS06250;old_locus_tag=CCO34_06250 NZ_NPMD01000002.1 Protein Homology CDS 432019 432954 . - 0 ID=cds-WP_001207423.1;Parent=gene-CCO34_RS06250;Dbxref=GenBank:WP_001207423.1;Name=WP_001207423.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=CCO34_RS06250;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207423.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 433071 433796 . - . ID=gene-CCO34_RS06255;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=CCO34_RS06255;old_locus_tag=CCO34_06255 NZ_NPMD01000002.1 Protein Homology CDS 433071 433796 . - 0 ID=cds-WP_000631369.1;Parent=gene-CCO34_RS06255;Dbxref=GenBank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=CCO34_RS06255;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 433796 434470 . - . ID=gene-CCO34_RS06260;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=CCO34_RS06260;old_locus_tag=CCO34_06260 NZ_NPMD01000002.1 Protein Homology CDS 433796 434470 . - 0 ID=cds-WP_000272799.1;Parent=gene-CCO34_RS06260;Dbxref=GenBank:WP_000272799.1;Name=WP_000272799.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=CCO34_RS06260;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272799.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 434470 435210 . - . ID=gene-CCO34_RS06265;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=CCO34_RS06265;old_locus_tag=CCO34_06265 NZ_NPMD01000002.1 Protein Homology CDS 434470 435210 . - 0 ID=cds-WP_000020930.1;Parent=gene-CCO34_RS06265;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=CCO34_RS06265;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 435370 436278 . - . ID=gene-CCO34_RS06270;Name=CCO34_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06270;old_locus_tag=CCO34_06270 NZ_NPMD01000002.1 Protein Homology CDS 435370 436278 . - 0 ID=cds-WP_001518176.1;Parent=gene-CCO34_RS06270;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=CCO34_RS06270;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 436633 438171 . - . ID=gene-CCO34_RS06280;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=CCO34_RS06280;old_locus_tag=CCO34_06280 NZ_NPMD01000002.1 Protein Homology CDS 436633 438171 . - 0 ID=cds-WP_023239021.1;Parent=gene-CCO34_RS06280;Dbxref=GenBank:WP_023239021.1;Name=WP_023239021.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=CCO34_RS06280;product=apolipoprotein N-acyltransferase;protein_id=WP_023239021.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 438191 439069 . - . ID=gene-CCO34_RS06285;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=CCO34_RS06285;old_locus_tag=CCO34_06285 NZ_NPMD01000002.1 Protein Homology CDS 438191 439069 . - 0 ID=cds-WP_001278615.1;Parent=gene-CCO34_RS06285;Dbxref=GenBank:WP_001278615.1;Name=WP_001278615.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=CCO34_RS06285;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278615.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 439227 439700 . - . ID=gene-CCO34_RS06290;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CCO34_RS06290;old_locus_tag=CCO34_06290 NZ_NPMD01000002.1 Protein Homology CDS 439227 439700 . - 0 ID=cds-WP_000084477.1;Parent=gene-CCO34_RS06290;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=CCO34_RS06290;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 439697 440743 . - . ID=gene-CCO34_RS06295;Name=CCO34_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06295;old_locus_tag=CCO34_06295 NZ_NPMD01000002.1 Protein Homology CDS 439697 440743 . - 0 ID=cds-WP_001018045.1;Parent=gene-CCO34_RS06295;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=CCO34_RS06295;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 440948 442372 . - . ID=gene-CCO34_RS06300;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CCO34_RS06300;old_locus_tag=CCO34_06300 NZ_NPMD01000002.1 Protein Homology CDS 440948 442372 . - 0 ID=cds-WP_001519200.1;Parent=gene-CCO34_RS06300;Dbxref=GenBank:WP_001519200.1;Name=WP_001519200.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=CCO34_RS06300;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001519200.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 442516 443691 . + . ID=gene-CCO34_RS06305;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=CCO34_RS06305;old_locus_tag=CCO34_06305 NZ_NPMD01000002.1 Protein Homology CDS 442516 443691 . + 0 ID=cds-WP_000184629.1;Parent=gene-CCO34_RS06305;Dbxref=GenBank:WP_000184629.1;Name=WP_000184629.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=CCO34_RS06305;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184629.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 443822 443896 . - . ID=gene-CCO34_RS06310;Name=CCO34_RS06310;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06310;old_locus_tag=CCO34_06310 NZ_NPMD01000002.1 tRNAscan-SE tRNA 443822 443896 . - . ID=rna-CCO34_RS06310;Parent=gene-CCO34_RS06310;anticodon=(pos:complement(443862..443864));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06310;product=tRNA-Gln NZ_NPMD01000002.1 tRNAscan-SE exon 443822 443896 . - . ID=exon-CCO34_RS06310-1;Parent=rna-CCO34_RS06310;anticodon=(pos:complement(443862..443864));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06310;product=tRNA-Gln NZ_NPMD01000002.1 RefSeq gene 443940 444014 . - . ID=gene-CCO34_RS06315;Name=CCO34_RS06315;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06315;old_locus_tag=CCO34_06315 NZ_NPMD01000002.1 tRNAscan-SE tRNA 443940 444014 . - . ID=rna-CCO34_RS06315;Parent=gene-CCO34_RS06315;anticodon=(pos:complement(443980..443982));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06315;product=tRNA-Gln NZ_NPMD01000002.1 tRNAscan-SE exon 443940 444014 . - . ID=exon-CCO34_RS06315-1;Parent=rna-CCO34_RS06315;anticodon=(pos:complement(443980..443982));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06315;product=tRNA-Gln NZ_NPMD01000002.1 RefSeq gene 444061 444137 . - . ID=gene-CCO34_RS06320;Name=CCO34_RS06320;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06320;old_locus_tag=CCO34_06320 NZ_NPMD01000002.1 tRNAscan-SE tRNA 444061 444137 . - . ID=rna-CCO34_RS06320;Parent=gene-CCO34_RS06320;anticodon=(pos:complement(444101..444103));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06320;product=tRNA-Met NZ_NPMD01000002.1 tRNAscan-SE exon 444061 444137 . - . ID=exon-CCO34_RS06320-1;Parent=rna-CCO34_RS06320;anticodon=(pos:complement(444101..444103));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06320;product=tRNA-Met NZ_NPMD01000002.1 RefSeq gene 444153 444227 . - . ID=gene-CCO34_RS06325;Name=CCO34_RS06325;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06325;old_locus_tag=CCO34_06325 NZ_NPMD01000002.1 tRNAscan-SE tRNA 444153 444227 . - . ID=rna-CCO34_RS06325;Parent=gene-CCO34_RS06325;anticodon=(pos:complement(444193..444195));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06325;product=tRNA-Gln NZ_NPMD01000002.1 tRNAscan-SE exon 444153 444227 . - . ID=exon-CCO34_RS06325-1;Parent=rna-CCO34_RS06325;anticodon=(pos:complement(444193..444195));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06325;product=tRNA-Gln NZ_NPMD01000002.1 RefSeq gene 444263 444337 . - . ID=gene-CCO34_RS06330;Name=CCO34_RS06330;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06330;old_locus_tag=CCO34_06330 NZ_NPMD01000002.1 tRNAscan-SE tRNA 444263 444337 . - . ID=rna-CCO34_RS06330;Parent=gene-CCO34_RS06330;anticodon=(pos:complement(444303..444305));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06330;product=tRNA-Gln NZ_NPMD01000002.1 tRNAscan-SE exon 444263 444337 . - . ID=exon-CCO34_RS06330-1;Parent=rna-CCO34_RS06330;anticodon=(pos:complement(444303..444305));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06330;product=tRNA-Gln NZ_NPMD01000002.1 RefSeq gene 444361 444445 . - . ID=gene-CCO34_RS06335;Name=CCO34_RS06335;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06335;old_locus_tag=CCO34_06335 NZ_NPMD01000002.1 tRNAscan-SE tRNA 444361 444445 . - . ID=rna-CCO34_RS06335;Parent=gene-CCO34_RS06335;anticodon=(pos:complement(444409..444411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06335;product=tRNA-Leu NZ_NPMD01000002.1 tRNAscan-SE exon 444361 444445 . - . ID=exon-CCO34_RS06335-1;Parent=rna-CCO34_RS06335;anticodon=(pos:complement(444409..444411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06335;product=tRNA-Leu NZ_NPMD01000002.1 RefSeq gene 444455 444531 . - . ID=gene-CCO34_RS06340;Name=CCO34_RS06340;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06340;old_locus_tag=CCO34_06340 NZ_NPMD01000002.1 tRNAscan-SE tRNA 444455 444531 . - . ID=rna-CCO34_RS06340;Parent=gene-CCO34_RS06340;anticodon=(pos:complement(444495..444497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06340;product=tRNA-Met NZ_NPMD01000002.1 tRNAscan-SE exon 444455 444531 . - . ID=exon-CCO34_RS06340-1;Parent=rna-CCO34_RS06340;anticodon=(pos:complement(444495..444497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06340;product=tRNA-Met NZ_NPMD01000002.1 RefSeq gene 444754 446418 . - . ID=gene-CCO34_RS06345;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=CCO34_RS06345;old_locus_tag=CCO34_06345 NZ_NPMD01000002.1 Protein Homology CDS 444754 446418 . - 0 ID=cds-WP_000337034.1;Parent=gene-CCO34_RS06345;Dbxref=GenBank:WP_000337034.1;Name=WP_000337034.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=CCO34_RS06345;product=asparagine synthase B;protein_id=WP_000337034.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 446708 447460 . - . ID=gene-CCO34_RS06355;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=CCO34_RS06355;old_locus_tag=CCO34_06355 NZ_NPMD01000002.1 Protein Homology CDS 446708 447460 . - 0 ID=cds-WP_000153143.1;Parent=gene-CCO34_RS06355;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=CCO34_RS06355;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 447507 448727 . - . ID=gene-CCO34_RS06360;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=CCO34_RS06360;old_locus_tag=CCO34_06360 NZ_NPMD01000002.1 Protein Homology CDS 447507 448727 . - 0 ID=cds-WP_000187578.1;Parent=gene-CCO34_RS06360;Dbxref=GenBank:WP_000187578.1;Name=WP_000187578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=CCO34_RS06360;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 448732 449886 . - . ID=gene-CCO34_RS06365;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CCO34_RS06365;old_locus_tag=CCO34_06365 NZ_NPMD01000002.1 Protein Homology CDS 448732 449886 . - 0 ID=cds-WP_000271186.1;Parent=gene-CCO34_RS06365;Dbxref=GenBank:WP_000271186.1;Name=WP_000271186.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=CCO34_RS06365;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271186.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 449946 450746 . - . ID=gene-CCO34_RS06370;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CCO34_RS06370;old_locus_tag=CCO34_06370 NZ_NPMD01000002.1 Protein Homology CDS 449946 450746 . - 0 ID=cds-WP_001237059.1;Parent=gene-CCO34_RS06370;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=CCO34_RS06370;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 451073 453025 . + . ID=gene-CCO34_RS06375;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=CCO34_RS06375;old_locus_tag=CCO34_06375 NZ_NPMD01000002.1 Protein Homology CDS 451073 453025 . + 0 ID=cds-WP_001023072.1;Parent=gene-CCO34_RS06375;Dbxref=GenBank:WP_001023072.1;Name=WP_001023072.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=CCO34_RS06375;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023072.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 453236 454903 . + . ID=gene-CCO34_RS06380;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=CCO34_RS06380;old_locus_tag=CCO34_06380 NZ_NPMD01000002.1 Protein Homology CDS 453236 454903 . + 0 ID=cds-WP_001287181.1;Parent=gene-CCO34_RS06380;Dbxref=GenBank:WP_001287181.1;Name=WP_001287181.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=CCO34_RS06380;product=glutamine--tRNA ligase;protein_id=WP_001287181.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 455564 456970 . + . ID=gene-CCO34_RS06385;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=CCO34_RS06385;old_locus_tag=CCO34_06385 NZ_NPMD01000002.1 Protein Homology CDS 455564 456970 . + 0 ID=cds-WP_001258803.1;Parent=gene-CCO34_RS06385;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=CCO34_RS06385;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 457020 457352 . + . ID=gene-CCO34_RS06390;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=CCO34_RS06390;old_locus_tag=CCO34_06390 NZ_NPMD01000002.1 Protein Homology CDS 457020 457352 . + 0 ID=cds-WP_000722260.1;Parent=gene-CCO34_RS06390;Dbxref=GenBank:WP_000722260.1;Name=WP_000722260.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=CCO34_RS06390;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722260.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 457401 458705 . - . ID=gene-CCO34_RS06395;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=CCO34_RS06395;old_locus_tag=CCO34_06395 NZ_NPMD01000002.1 Protein Homology CDS 457401 458705 . - 0 ID=cds-WP_000057014.1;Parent=gene-CCO34_RS06395;Dbxref=GenBank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=CCO34_RS06395;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 458756 459895 . - . ID=gene-CCO34_RS06400;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=CCO34_RS06400;old_locus_tag=CCO34_06400 NZ_NPMD01000002.1 Protein Homology CDS 458756 459895 . - 0 ID=cds-WP_000811147.1;Parent=gene-CCO34_RS06400;Dbxref=GenBank:WP_000811147.1;Name=WP_000811147.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=CCO34_RS06400;product=tricarballylate utilization protein TcuB;protein_id=WP_000811147.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 459882 461285 . - . ID=gene-CCO34_RS06405;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=CCO34_RS06405;old_locus_tag=CCO34_06405 NZ_NPMD01000002.1 Protein Homology CDS 459882 461285 . - 0 ID=cds-WP_000228700.1;Parent=gene-CCO34_RS06405;Dbxref=GenBank:WP_000228700.1;Name=WP_000228700.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=CCO34_RS06405;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228700.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 461383 462309 . - . ID=gene-CCO34_RS06410;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=CCO34_RS06410;old_locus_tag=CCO34_06410 NZ_NPMD01000002.1 Protein Homology CDS 461383 462309 . - 0 ID=cds-WP_000423371.1;Parent=gene-CCO34_RS06410;Dbxref=GenBank:WP_000423371.1;Name=WP_000423371.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=CCO34_RS06410;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423371.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 462424 462876 . - . ID=gene-CCO34_RS06415;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CCO34_RS06415;old_locus_tag=CCO34_06415 NZ_NPMD01000002.1 Protein Homology CDS 462424 462876 . - 0 ID=cds-WP_000131699.1;Parent=gene-CCO34_RS06415;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=CCO34_RS06415;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 462869 462954 . - . ID=gene-CCO34_RS25675;Name=CCO34_RS25675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25675;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 462869 462954 . - 0 ID=cds-CCO34_RS25675;Parent=gene-CCO34_RS25675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=CCO34_RS25675;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 463158 463688 . - . ID=gene-CCO34_RS06420;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=CCO34_RS06420;old_locus_tag=CCO34_06420 NZ_NPMD01000002.1 Protein Homology CDS 463158 463688 . - 0 ID=cds-WP_001018621.1;Parent=gene-CCO34_RS06420;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=CCO34_RS06420;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 463839 464132 . - . ID=gene-CCO34_RS06425;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=CCO34_RS06425;old_locus_tag=CCO34_06425 NZ_NPMD01000002.1 Protein Homology CDS 463839 464132 . - 0 ID=cds-WP_001040939.1;Parent=gene-CCO34_RS06425;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=CCO34_RS06425;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 464266 465036 . - . ID=gene-CCO34_RS06430;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=CCO34_RS06430;old_locus_tag=CCO34_06430 NZ_NPMD01000002.1 Protein Homology CDS 464266 465036 . - 0 ID=cds-WP_000773246.1;Parent=gene-CCO34_RS06430;Dbxref=GenBank:WP_000773246.1;Name=WP_000773246.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=CCO34_RS06430;product=esterase;protein_id=WP_000773246.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 465221 465763 . + . ID=gene-CCO34_RS06435;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=CCO34_RS06435;old_locus_tag=CCO34_06435 NZ_NPMD01000002.1 Protein Homology CDS 465221 465763 . + 0 ID=cds-WP_000848395.1;Parent=gene-CCO34_RS06435;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=CCO34_RS06435;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 465788 467428 . + . ID=gene-CCO34_RS06440;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=CCO34_RS06440;old_locus_tag=CCO34_06440 NZ_NPMD01000002.1 Protein Homology CDS 465788 467428 . + 0 ID=cds-WP_000974387.1;Parent=gene-CCO34_RS06440;Dbxref=GenBank:WP_000974387.1;Name=WP_000974387.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=CCO34_RS06440;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974387.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 467543 468028 . - . ID=gene-CCO34_RS06445;Name=CCO34_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06445;old_locus_tag=CCO34_06445 NZ_NPMD01000002.1 Protein Homology CDS 467543 468028 . - 0 ID=cds-WP_000070056.1;Parent=gene-CCO34_RS06445;Dbxref=GenBank:WP_000070056.1;Name=WP_000070056.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=CCO34_RS06445;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070056.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 468093 469412 . - . ID=gene-CCO34_RS06450;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=CCO34_RS06450;old_locus_tag=CCO34_06450 NZ_NPMD01000002.1 Protein Homology CDS 468093 469412 . - 0 ID=cds-WP_000042658.1;Parent=gene-CCO34_RS06450;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=CCO34_RS06450;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 469409 471607 . - . ID=gene-CCO34_RS06455;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=CCO34_RS06455;old_locus_tag=CCO34_06455 NZ_NPMD01000002.1 Protein Homology CDS 469409 471607 . - 0 ID=cds-WP_001292402.1;Parent=gene-CCO34_RS06455;Dbxref=GenBank:WP_001292402.1;Name=WP_001292402.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=CCO34_RS06455;product=ornithine decarboxylase SpeF;protein_id=WP_001292402.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 471987 472091 . - . ID=gene-CCO34_RS25250;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=CCO34_RS25250 NZ_NPMD01000002.1 Protein Homology CDS 471987 472091 . - 0 ID=cds-WP_015632840.1;Parent=gene-CCO34_RS25250;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=CCO34_RS25250;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 472369 473046 . - . ID=gene-CCO34_RS06460;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=CCO34_RS06460;old_locus_tag=CCO34_06460 NZ_NPMD01000002.1 Protein Homology CDS 472369 473046 . - 0 ID=cds-WP_000186053.1;Parent=gene-CCO34_RS06460;Dbxref=GenBank:WP_000186053.1;Name=WP_000186053.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=CCO34_RS06460;product=two-component system response regulator KdpE;protein_id=WP_000186053.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 473043 475727 . - . ID=gene-CCO34_RS06465;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=CCO34_RS06465;old_locus_tag=CCO34_06465 NZ_NPMD01000002.1 Protein Homology CDS 473043 475727 . - 0 ID=cds-WP_000997489.1;Parent=gene-CCO34_RS06465;Dbxref=GenBank:WP_000997489.1;Name=WP_000997489.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=CCO34_RS06465;product=two-component system sensor histidine kinase KdpD;protein_id=WP_000997489.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 475724 476308 . - . ID=gene-CCO34_RS06470;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CCO34_RS06470;old_locus_tag=CCO34_06470 NZ_NPMD01000002.1 Protein Homology CDS 475724 476308 . - 0 ID=cds-WP_001518103.1;Parent=gene-CCO34_RS06470;Dbxref=GenBank:WP_001518103.1;Name=WP_001518103.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=CCO34_RS06470;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_001518103.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 476317 478365 . - . ID=gene-CCO34_RS06475;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CCO34_RS06475;old_locus_tag=CCO34_06475 NZ_NPMD01000002.1 Protein Homology CDS 476317 478365 . - 0 ID=cds-WP_000088026.1;Parent=gene-CCO34_RS06475;Dbxref=GenBank:WP_000088026.1;Name=WP_000088026.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=CCO34_RS06475;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000088026.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 478386 480065 . - . ID=gene-CCO34_RS06480;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CCO34_RS06480;old_locus_tag=CCO34_06480 NZ_NPMD01000002.1 Protein Homology CDS 478386 480065 . - 0 ID=cds-WP_000730068.1;Parent=gene-CCO34_RS06480;Dbxref=GenBank:WP_000730068.1;Name=WP_000730068.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=CCO34_RS06480;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000730068.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 480065 480154 . - . ID=gene-CCO34_RS06485;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CCO34_RS06485;old_locus_tag=CCO34_06485 NZ_NPMD01000002.1 Protein Homology CDS 480065 480154 . - 0 ID=cds-WP_001670793.1;Parent=gene-CCO34_RS06485;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=CCO34_RS06485;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 480491 480697 . + . ID=gene-CCO34_RS06490;Name=CCO34_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06490;old_locus_tag=CCO34_06490 NZ_NPMD01000002.1 Protein Homology CDS 480491 480697 . + 0 ID=cds-WP_000401437.1;Parent=gene-CCO34_RS06490;Dbxref=GenBank:WP_000401437.1;Name=WP_000401437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=CCO34_RS06490;product=YbfA family protein;protein_id=WP_000401437.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 480808 482229 . + . ID=gene-CCO34_RS06495;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=CCO34_RS06495;old_locus_tag=CCO34_06495 NZ_NPMD01000002.1 Protein Homology CDS 480808 482229 . + 0 ID=cds-WP_001142008.1;Parent=gene-CCO34_RS06495;Dbxref=GenBank:WP_001142008.1;Name=WP_001142008.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=CCO34_RS06495;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_001142008.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 482268 483749 . - . ID=gene-CCO34_RS06500;Name=CCO34_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06500;old_locus_tag=CCO34_06500 NZ_NPMD01000002.1 Protein Homology CDS 482268 483749 . - 0 ID=cds-WP_001041123.1;Parent=gene-CCO34_RS06500;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=CCO34_RS06500;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 484078 484821 . + . ID=gene-CCO34_RS06510;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=CCO34_RS06510;old_locus_tag=CCO34_06510 NZ_NPMD01000002.1 Protein Homology CDS 484078 484821 . + 0 ID=cds-WP_000798844.1;Parent=gene-CCO34_RS06510;Dbxref=GenBank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=CCO34_RS06510;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 484837 485493 . + . ID=gene-CCO34_RS06515;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CCO34_RS06515;old_locus_tag=CCO34_06515 NZ_NPMD01000002.1 Protein Homology CDS 484837 485493 . + 0 ID=cds-WP_001188371.1;Parent=gene-CCO34_RS06515;Dbxref=GenBank:WP_001188371.1;Name=WP_001188371.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=CCO34_RS06515;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188371.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 485487 486419 . + . ID=gene-CCO34_RS06520;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=CCO34_RS06520;old_locus_tag=CCO34_06520 NZ_NPMD01000002.1 Protein Homology CDS 485487 486419 . + 0 ID=cds-WP_000932038.1;Parent=gene-CCO34_RS06520;Dbxref=GenBank:WP_000932038.1;Name=WP_000932038.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=CCO34_RS06520;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932038.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 486409 487143 . + . ID=gene-CCO34_RS06525;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CCO34_RS06525;old_locus_tag=CCO34_06525 NZ_NPMD01000002.1 Protein Homology CDS 486409 487143 . + 0 ID=cds-WP_001017920.1;Parent=gene-CCO34_RS06525;Dbxref=GenBank:WP_001017920.1;Name=WP_001017920.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=CCO34_RS06525;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017920.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 487265 488056 . + . ID=gene-CCO34_RS06530;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=CCO34_RS06530;old_locus_tag=CCO34_06530 NZ_NPMD01000002.1 Protein Homology CDS 487265 488056 . + 0 ID=cds-WP_001113967.1;Parent=gene-CCO34_RS06530;Dbxref=GenBank:WP_001113967.1;Name=WP_001113967.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=CCO34_RS06530;product=endonuclease VIII;protein_id=WP_001113967.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 488111 489157 . - . ID=gene-CCO34_RS06535;Name=CCO34_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06535;old_locus_tag=CCO34_06535 NZ_NPMD01000002.1 Protein Homology CDS 488111 489157 . - 0 ID=cds-WP_001122033.1;Parent=gene-CCO34_RS06535;Dbxref=GenBank:WP_001122033.1;Name=WP_001122033.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=CCO34_RS06535;product=AbrB family transcriptional regulator;protein_id=WP_001122033.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 489294 490577 . - . ID=gene-CCO34_RS06540;Name=CCO34_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06540;old_locus_tag=CCO34_06540 NZ_NPMD01000002.1 Protein Homology CDS 489294 490577 . - 0 ID=cds-WP_000785811.1;Parent=gene-CCO34_RS06540;Dbxref=GenBank:WP_000785811.1;Name=WP_000785811.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=CCO34_RS06540;product=citrate synthase;protein_id=WP_000785811.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 490803 490934 . - . ID=gene-CCO34_RS26175;Name=CCO34_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26175 NZ_NPMD01000002.1 Protein Homology CDS 490803 490934 . - 0 ID=cds-WP_418142699.1;Parent=gene-CCO34_RS26175;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=CCO34_RS26175;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 491317 491721 . + . ID=gene-CCO34_RS06555;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=CCO34_RS06555;old_locus_tag=CCO34_06555 NZ_NPMD01000002.1 Protein Homology CDS 491317 491721 . + 0 ID=cds-WP_000263340.1;Parent=gene-CCO34_RS06555;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=CCO34_RS06555;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 491715 492062 . + . ID=gene-CCO34_RS06560;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=CCO34_RS06560;old_locus_tag=CCO34_06560 NZ_NPMD01000002.1 Protein Homology CDS 491715 492062 . + 0 ID=cds-WP_000254356.1;Parent=gene-CCO34_RS06560;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=CCO34_RS06560;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 492062 493828 . + . ID=gene-CCO34_RS06565;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CCO34_RS06565;old_locus_tag=CCO34_06565 NZ_NPMD01000002.1 Protein Homology CDS 492062 493828 . + 0 ID=cds-WP_000775561.1;Parent=gene-CCO34_RS06565;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=CCO34_RS06565;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 493845 494561 . + . ID=gene-CCO34_RS06570;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CCO34_RS06570;old_locus_tag=CCO34_06570 NZ_NPMD01000002.1 Protein Homology CDS 493845 494561 . + 0 ID=cds-WP_001537859.1;Parent=gene-CCO34_RS06570;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=CCO34_RS06570;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 495087 497888 . + . ID=gene-CCO34_RS06575;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=CCO34_RS06575;old_locus_tag=CCO34_06575 NZ_NPMD01000002.1 Protein Homology CDS 495087 497888 . + 0 ID=cds-WP_001181500.1;Parent=gene-CCO34_RS06575;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=CCO34_RS06575;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 497903 499111 . + . ID=gene-CCO34_RS06580;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=CCO34_RS06580;old_locus_tag=CCO34_06580 NZ_NPMD01000002.1 Protein Homology CDS 497903 499111 . + 0 ID=cds-WP_000099858.1;Parent=gene-CCO34_RS06580;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=CCO34_RS06580;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 499253 500419 . + . ID=gene-CCO34_RS06585;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CCO34_RS06585;old_locus_tag=CCO34_06585 NZ_NPMD01000002.1 Protein Homology CDS 499253 500419 . + 0 ID=cds-WP_001048590.1;Parent=gene-CCO34_RS06585;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=CCO34_RS06585;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 500419 501288 . + . ID=gene-CCO34_RS06590;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CCO34_RS06590;old_locus_tag=CCO34_06590 NZ_NPMD01000002.1 Protein Homology CDS 500419 501288 . + 0 ID=cds-WP_000114631.1;Parent=gene-CCO34_RS06590;Dbxref=GenBank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=CCO34_RS06590;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 502871 504439 . + . ID=gene-CCO34_RS06595;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=CCO34_RS06595;old_locus_tag=CCO34_06595 NZ_NPMD01000002.1 Protein Homology CDS 502871 504439 . + 0 ID=cds-WP_000884369.1;Parent=gene-CCO34_RS06595;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=CCO34_RS06595;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 504455 505594 . + . ID=gene-CCO34_RS06600;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO34_RS06600;old_locus_tag=CCO34_06600 NZ_NPMD01000002.1 Protein Homology CDS 504455 505594 . + 0 ID=cds-WP_000568258.1;Parent=gene-CCO34_RS06600;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=CCO34_RS06600;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 505609 505722 . + . ID=gene-CCO34_RS06605;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=CCO34_RS06605;old_locus_tag=CCO34_06605 NZ_NPMD01000002.1 Protein Homology CDS 505609 505722 . + 0 ID=cds-WP_000270278.1;Parent=gene-CCO34_RS06605;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=CCO34_RS06605;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 505722 506015 . + . ID=gene-CCO34_RS06610;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=CCO34_RS06610;old_locus_tag=CCO34_06610 NZ_NPMD01000002.1 Protein Homology CDS 505722 506015 . + 0 ID=cds-WP_000148790.1;Parent=gene-CCO34_RS06610;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=CCO34_RS06610;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 506244 506648 . + . ID=gene-CCO34_RS06615;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=CCO34_RS06615;old_locus_tag=CCO34_06615 NZ_NPMD01000002.1 Protein Homology CDS 506244 506648 . + 0 ID=cds-WP_001046240.1;Parent=gene-CCO34_RS06615;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=CCO34_RS06615;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 506645 507337 . + . ID=gene-CCO34_RS06620;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=CCO34_RS06620;old_locus_tag=CCO34_06620 NZ_NPMD01000002.1 Protein Homology CDS 506645 507337 . + 0 ID=cds-WP_000131318.1;Parent=gene-CCO34_RS06620;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=CCO34_RS06620;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 507341 507769 . + . ID=gene-CCO34_RS06625;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=CCO34_RS06625;old_locus_tag=CCO34_06625 NZ_NPMD01000002.1 Protein Homology CDS 507341 507769 . + 0 ID=cds-WP_000124676.1;Parent=gene-CCO34_RS06625;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=CCO34_RS06625;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 507834 509012 . + . ID=gene-CCO34_RS06630;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=CCO34_RS06630;old_locus_tag=CCO34_06630 NZ_NPMD01000002.1 Protein Homology CDS 507834 509012 . + 0 ID=cds-WP_000030589.1;Parent=gene-CCO34_RS06630;Dbxref=GenBank:WP_000030589.1;Name=WP_000030589.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=CCO34_RS06630;product=cell envelope integrity protein TolA;protein_id=WP_000030589.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 509136 510428 . + . ID=gene-CCO34_RS06635;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=CCO34_RS06635;old_locus_tag=CCO34_06635 NZ_NPMD01000002.1 Protein Homology CDS 509136 510428 . + 0 ID=cds-WP_001562341.1;Parent=gene-CCO34_RS06635;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=CCO34_RS06635;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 510463 510987 . + . ID=gene-CCO34_RS06640;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=CCO34_RS06640;old_locus_tag=CCO34_06640 NZ_NPMD01000002.1 Protein Homology CDS 510463 510987 . + 0 ID=cds-WP_001176621.1;Parent=gene-CCO34_RS06640;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=CCO34_RS06640;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 510997 511785 . + . ID=gene-CCO34_RS06645;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=CCO34_RS06645;old_locus_tag=CCO34_06645 NZ_NPMD01000002.1 Protein Homology CDS 510997 511785 . + 0 ID=cds-WP_000097552.1;Parent=gene-CCO34_RS06645;Dbxref=GenBank:WP_000097552.1;Name=WP_000097552.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=CCO34_RS06645;product=cell division protein CpoB;protein_id=WP_000097552.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 511950 512025 . + . ID=gene-CCO34_RS06650;Name=CCO34_RS06650;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06650;old_locus_tag=CCO34_06650 NZ_NPMD01000002.1 tRNAscan-SE tRNA 511950 512025 . + . ID=rna-CCO34_RS06650;Parent=gene-CCO34_RS06650;anticodon=(pos:511983..511985);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06650;product=tRNA-Lys NZ_NPMD01000002.1 tRNAscan-SE exon 511950 512025 . + . ID=exon-CCO34_RS06650-1;Parent=rna-CCO34_RS06650;anticodon=(pos:511983..511985);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06650;product=tRNA-Lys NZ_NPMD01000002.1 RefSeq gene 512157 512232 . + . ID=gene-CCO34_RS06655;Name=CCO34_RS06655;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06655;old_locus_tag=CCO34_06655 NZ_NPMD01000002.1 tRNAscan-SE tRNA 512157 512232 . + . ID=rna-CCO34_RS06655;Parent=gene-CCO34_RS06655;anticodon=(pos:512190..512192);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06655;product=tRNA-Val NZ_NPMD01000002.1 tRNAscan-SE exon 512157 512232 . + . ID=exon-CCO34_RS06655-1;Parent=rna-CCO34_RS06655;anticodon=(pos:512190..512192);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06655;product=tRNA-Val NZ_NPMD01000002.1 RefSeq gene 512236 512311 . + . ID=gene-CCO34_RS06660;Name=CCO34_RS06660;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06660;old_locus_tag=CCO34_06660 NZ_NPMD01000002.1 tRNAscan-SE tRNA 512236 512311 . + . ID=rna-CCO34_RS06660;Parent=gene-CCO34_RS06660;anticodon=(pos:512269..512271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06660;product=tRNA-Lys NZ_NPMD01000002.1 tRNAscan-SE exon 512236 512311 . + . ID=exon-CCO34_RS06660-1;Parent=rna-CCO34_RS06660;anticodon=(pos:512269..512271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06660;product=tRNA-Lys NZ_NPMD01000002.1 RefSeq gene 512361 512436 . + . ID=gene-CCO34_RS06665;Name=CCO34_RS06665;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06665;old_locus_tag=CCO34_06665 NZ_NPMD01000002.1 tRNAscan-SE tRNA 512361 512436 . + . ID=rna-CCO34_RS06665;Parent=gene-CCO34_RS06665;anticodon=(pos:512394..512396);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06665;product=tRNA-Lys NZ_NPMD01000002.1 tRNAscan-SE exon 512361 512436 . + . ID=exon-CCO34_RS06665-1;Parent=rna-CCO34_RS06665;anticodon=(pos:512394..512396);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06665;product=tRNA-Lys NZ_NPMD01000002.1 RefSeq gene 512571 512646 . + . ID=gene-CCO34_RS06670;Name=CCO34_RS06670;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS06670;old_locus_tag=CCO34_06670 NZ_NPMD01000002.1 tRNAscan-SE tRNA 512571 512646 . + . ID=rna-CCO34_RS06670;Parent=gene-CCO34_RS06670;anticodon=(pos:512604..512606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06670;product=tRNA-Lys NZ_NPMD01000002.1 tRNAscan-SE exon 512571 512646 . + . ID=exon-CCO34_RS06670-1;Parent=rna-CCO34_RS06670;anticodon=(pos:512604..512606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS06670;product=tRNA-Lys NZ_NPMD01000002.1 RefSeq gene 512676 512801 . + . ID=gene-CCO34_RS06675;Name=CCO34_RS06675;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS06675;old_locus_tag=CCO34_06675 NZ_NPMD01000002.1 cmsearch ncRNA 512676 512801 . + . ID=rna-CCO34_RS06675;Parent=gene-CCO34_RS06675;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS06675;product=RtT sRNA NZ_NPMD01000002.1 cmsearch exon 512676 512801 . + . ID=exon-CCO34_RS06675-1;Parent=rna-CCO34_RS06675;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS06675;product=RtT sRNA NZ_NPMD01000002.1 RefSeq gene 512831 512955 . + . ID=gene-CCO34_RS06680;Name=CCO34_RS06680;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS06680;old_locus_tag=CCO34_06680 NZ_NPMD01000002.1 cmsearch ncRNA 512831 512955 . + . ID=rna-CCO34_RS06680;Parent=gene-CCO34_RS06680;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS06680;product=RtT sRNA NZ_NPMD01000002.1 cmsearch exon 512831 512955 . + . ID=exon-CCO34_RS06680-1;Parent=rna-CCO34_RS06680;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS06680;product=RtT sRNA NZ_NPMD01000002.1 RefSeq gene 513250 514293 . + . ID=gene-CCO34_RS06685;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=CCO34_RS06685;old_locus_tag=CCO34_06685 NZ_NPMD01000002.1 Protein Homology CDS 513250 514293 . + 0 ID=cds-WP_000115347.1;Parent=gene-CCO34_RS06685;Dbxref=GenBank:WP_000115347.1;Name=WP_000115347.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=CCO34_RS06685;product=quinolinate synthase NadA;protein_id=WP_000115347.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 514318 515037 . + . ID=gene-CCO34_RS06690;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=CCO34_RS06690;old_locus_tag=CCO34_06690 NZ_NPMD01000002.1 Protein Homology CDS 514318 515037 . + 0 ID=cds-WP_000345368.1;Parent=gene-CCO34_RS06690;Dbxref=GenBank:WP_000345368.1;Name=WP_000345368.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=CCO34_RS06690;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345368.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 515034 515972 . - . ID=gene-CCO34_RS06695;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=CCO34_RS06695;old_locus_tag=CCO34_06695 NZ_NPMD01000002.1 Protein Homology CDS 515034 515972 . - 0 ID=cds-WP_000951241.1;Parent=gene-CCO34_RS06695;Dbxref=GenBank:WP_000951241.1;Name=WP_000951241.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=CCO34_RS06695;product=CDF family zinc transporter ZitB;protein_id=WP_000951241.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 516083 516469 . - . ID=gene-CCO34_RS06700;Name=CCO34_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06700;old_locus_tag=CCO34_06700 NZ_NPMD01000002.1 Protein Homology CDS 516083 516469 . - 0 ID=cds-WP_000784379.1;Parent=gene-CCO34_RS06700;Dbxref=GenBank:WP_000784379.1;Name=WP_000784379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=CCO34_RS06700;product=YbgS-like family protein;protein_id=WP_000784379.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 516789 517841 . + . ID=gene-CCO34_RS06705;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=CCO34_RS06705;old_locus_tag=CCO34_06705 NZ_NPMD01000002.1 Protein Homology CDS 516789 517841 . + 0 ID=cds-WP_001109233.1;Parent=gene-CCO34_RS06705;Dbxref=GenBank:WP_001109233.1;Name=WP_001109233.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=CCO34_RS06705;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109233.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 517935 518480 . - . ID=gene-CCO34_RS06710;Name=CCO34_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06710;old_locus_tag=CCO34_06710 NZ_NPMD01000002.1 Protein Homology CDS 517935 518480 . - 0 ID=cds-WP_000970374.1;Parent=gene-CCO34_RS06710;Dbxref=GenBank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=CCO34_RS06710;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 518495 519340 . - . ID=gene-CCO34_RS06715;Name=CCO34_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06715;old_locus_tag=CCO34_06715 NZ_NPMD01000002.1 Protein Homology CDS 518495 519340 . - 0 ID=cds-WP_000086831.1;Parent=gene-CCO34_RS06715;Dbxref=GenBank:WP_000086831.1;Name=WP_000086831.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=CCO34_RS06715;product=fumarate hydratase;protein_id=WP_000086831.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 519470 520360 . + . ID=gene-CCO34_RS06720;Name=CCO34_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06720;old_locus_tag=CCO34_06720 NZ_NPMD01000002.1 Protein Homology CDS 519470 520360 . + 0 ID=cds-WP_000405927.1;Parent=gene-CCO34_RS06720;Dbxref=GenBank:WP_000405927.1;Name=WP_000405927.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=CCO34_RS06720;product=LysR family transcriptional regulator;protein_id=WP_000405927.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 520361 521344 . - . ID=gene-CCO34_RS06725;Name=CCO34_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06725;old_locus_tag=CCO34_06725 NZ_NPMD01000002.1 Protein Homology CDS 520361 521344 . - 0 ID=cds-WP_000282119.1;Parent=gene-CCO34_RS06725;Dbxref=GenBank:WP_000282119.1;Name=WP_000282119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=CCO34_RS06725;product=LysR family transcriptional regulator;protein_id=WP_000282119.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 521567 522835 . + . ID=gene-CCO34_RS06730;Name=CCO34_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06730;old_locus_tag=CCO34_06730 NZ_NPMD01000002.1 Protein Homology CDS 521567 522835 . + 0 ID=cds-WP_000074128.1;Parent=gene-CCO34_RS06730;Dbxref=GenBank:WP_000074128.1;Name=WP_000074128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=CCO34_RS06730;product=SLC13 family permease;protein_id=WP_000074128.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 522885 523130 . + . ID=gene-CCO34_RS06735;Name=CCO34_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06735;old_locus_tag=CCO34_06735 NZ_NPMD01000002.1 Protein Homology CDS 522885 523130 . + 0 ID=cds-WP_001089088.1;Parent=gene-CCO34_RS06735;Dbxref=GenBank:WP_001089088.1;Name=WP_001089088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=CCO34_RS06735;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001089088.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 523146 524915 . + . ID=gene-CCO34_RS06740;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO34_RS06740;old_locus_tag=CCO34_06740 NZ_NPMD01000002.1 Protein Homology CDS 523146 524915 . + 0 ID=cds-WP_000214939.1;Parent=gene-CCO34_RS06740;Dbxref=GenBank:WP_000214939.1;Name=WP_000214939.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO34_RS06740;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_000214939.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 524931 526232 . + . ID=gene-CCO34_RS06745;Name=CCO34_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06745;old_locus_tag=CCO34_06745 NZ_NPMD01000002.1 Protein Homology CDS 524931 526232 . + 0 ID=cds-WP_000444908.1;Parent=gene-CCO34_RS06745;Dbxref=GenBank:WP_000444908.1;Name=WP_000444908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO34_RS06745;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444908.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 526351 527049 . + . ID=gene-CCO34_RS06750;Name=CCO34_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06750;old_locus_tag=CCO34_06750 NZ_NPMD01000002.1 Protein Homology CDS 526351 527049 . + 0 ID=cds-WP_001005993.1;Parent=gene-CCO34_RS06750;Dbxref=GenBank:WP_001005993.1;Name=WP_001005993.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=CCO34_RS06750;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_001005993.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 527429 528508 . + . ID=gene-CCO34_RS06755;Name=CCO34_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06755;old_locus_tag=CCO34_06755 NZ_NPMD01000002.1 Protein Homology CDS 527429 528508 . + 0 ID=cds-WP_000128327.1;Parent=gene-CCO34_RS06755;Dbxref=GenBank:WP_000128327.1;Name=WP_000128327.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=CCO34_RS06755;product=FecCD family ABC transporter permease;protein_id=WP_000128327.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 528508 529284 . + . ID=gene-CCO34_RS06760;Name=CCO34_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06760;old_locus_tag=CCO34_06760 NZ_NPMD01000002.1 Protein Homology CDS 528508 529284 . + 0 ID=cds-WP_001214710.1;Parent=gene-CCO34_RS06760;Dbxref=GenBank:WP_001214710.1;Name=WP_001214710.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=CCO34_RS06760;product=ABC transporter ATP-binding protein;protein_id=WP_001214710.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 529375 530127 . - . ID=gene-CCO34_RS06765;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=CCO34_RS06765;old_locus_tag=CCO34_06765 NZ_NPMD01000002.1 Protein Homology CDS 529375 530127 . - 0 ID=cds-WP_000301556.1;Parent=gene-CCO34_RS06765;Dbxref=GenBank:WP_000301556.1;Name=WP_000301556.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=CCO34_RS06765;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301556.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 530351 531391 . - . ID=gene-CCO34_RS06775;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=CCO34_RS06775;old_locus_tag=CCO34_06775 NZ_NPMD01000002.1 Protein Homology CDS 530351 531391 . - 0 ID=cds-WP_000931428.1;Parent=gene-CCO34_RS06775;Dbxref=GenBank:WP_000931428.1;Name=WP_000931428.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=CCO34_RS06775;product=galactose-1-epimerase;protein_id=WP_000931428.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 531385 532533 . - . ID=gene-CCO34_RS06780;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=CCO34_RS06780;old_locus_tag=CCO34_06780 NZ_NPMD01000002.1 Protein Homology CDS 531385 532533 . - 0 ID=cds-WP_001049356.1;Parent=gene-CCO34_RS06780;Dbxref=GenBank:WP_001049356.1;Name=WP_001049356.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=CCO34_RS06780;product=galactokinase;protein_id=WP_001049356.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 532536 533582 . - . ID=gene-CCO34_RS06785;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CCO34_RS06785;old_locus_tag=CCO34_06785 NZ_NPMD01000002.1 Protein Homology CDS 532536 533582 . - 0 ID=cds-WP_000187471.1;Parent=gene-CCO34_RS06785;Dbxref=GenBank:WP_000187471.1;Name=WP_000187471.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=CCO34_RS06785;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187471.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 533593 534609 . - . ID=gene-CCO34_RS06790;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CCO34_RS06790;old_locus_tag=CCO34_06790 NZ_NPMD01000002.1 Protein Homology CDS 533593 534609 . - 0 ID=cds-WP_001265465.1;Parent=gene-CCO34_RS06790;Dbxref=GenBank:WP_001265465.1;Name=WP_001265465.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=CCO34_RS06790;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265465.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 534832 535740 . - . ID=gene-CCO34_RS06795;Name=CCO34_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06795;old_locus_tag=CCO34_06795 NZ_NPMD01000002.1 Protein Homology CDS 534832 535740 . - 0 ID=cds-WP_000885519.1;Parent=gene-CCO34_RS06795;Dbxref=GenBank:WP_000885519.1;Name=WP_000885519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=CCO34_RS06795;product=DUF2167 domain-containing protein;protein_id=WP_000885519.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 535911 537386 . - . ID=gene-CCO34_RS06800;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=CCO34_RS06800;old_locus_tag=CCO34_06800 NZ_NPMD01000002.1 Protein Homology CDS 535911 537386 . - 0 ID=cds-WP_000096936.1;Parent=gene-CCO34_RS06800;Dbxref=GenBank:WP_000096936.1;Name=WP_000096936.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=CCO34_RS06800;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096936.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 537454 538242 . - . ID=gene-CCO34_RS06810;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=CCO34_RS06810;old_locus_tag=CCO34_06810 NZ_NPMD01000002.1 Protein Homology CDS 537454 538242 . - 0 ID=cds-WP_001147418.1;Parent=gene-CCO34_RS06810;Dbxref=GenBank:WP_001147418.1;Name=WP_001147418.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=CCO34_RS06810;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147418.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 538371 538520 . + . ID=gene-CCO34_RS06815;Name=CCO34_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06815;old_locus_tag=CCO34_06815 NZ_NPMD01000002.1 Protein Homology CDS 538371 538520 . + 0 ID=cds-WP_000891513.1;Parent=gene-CCO34_RS06815;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=CCO34_RS06815;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 538687 539460 . + . ID=gene-CCO34_RS06820;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CCO34_RS06820;old_locus_tag=CCO34_06820 NZ_NPMD01000002.1 Protein Homology CDS 538687 539460 . + 0 ID=cds-WP_000951416.1;Parent=gene-CCO34_RS06820;Dbxref=GenBank:WP_000951416.1;Name=WP_000951416.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=CCO34_RS06820;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000951416.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 539460 540149 . + . ID=gene-CCO34_RS06825;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CCO34_RS06825;old_locus_tag=CCO34_06825 NZ_NPMD01000002.1 Protein Homology CDS 539460 540149 . + 0 ID=cds-WP_000604026.1;Parent=gene-CCO34_RS06825;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=CCO34_RS06825;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 540152 541210 . + . ID=gene-CCO34_RS06830;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=CCO34_RS06830;old_locus_tag=CCO34_06830 NZ_NPMD01000002.1 Protein Homology CDS 540152 541210 . + 0 ID=cds-WP_000891710.1;Parent=gene-CCO34_RS06830;Dbxref=GenBank:WP_000891710.1;Name=WP_000891710.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=CCO34_RS06830;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891710.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 541211 542029 . - . ID=gene-CCO34_RS06835;Name=CCO34_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06835;old_locus_tag=CCO34_06835 NZ_NPMD01000002.1 Protein Homology CDS 541211 542029 . - 0 ID=cds-WP_001748281.1;Parent=gene-CCO34_RS06835;Dbxref=GenBank:WP_001748281.1;Name=WP_001748281.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=CCO34_RS06835;product=pyridoxal phosphatase;protein_id=WP_001748281.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 542193 543188 . + . ID=gene-CCO34_RS06840;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=CCO34_RS06840;old_locus_tag=CCO34_06840 NZ_NPMD01000002.1 Protein Homology CDS 542193 543188 . + 0 ID=cds-WP_000815468.1;Parent=gene-CCO34_RS06840;Dbxref=GenBank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=CCO34_RS06840;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 543332 544615 . - . ID=gene-CCO34_RS06845;Name=CCO34_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06845;old_locus_tag=CCO34_06845 NZ_NPMD01000002.1 Protein Homology CDS 543332 544615 . - 0 ID=cds-WP_001094775.1;Parent=gene-CCO34_RS06845;Dbxref=GenBank:WP_001094775.1;Name=WP_001094775.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=CCO34_RS06845;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094775.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 544853 546076 . + . ID=gene-CCO34_RS06850;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CCO34_RS06850;old_locus_tag=CCO34_06850 NZ_NPMD01000002.1 Protein Homology CDS 544853 546076 . + 0 ID=cds-WP_001249484.1;Parent=gene-CCO34_RS06850;Dbxref=GenBank:WP_001249484.1;Name=WP_001249484.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=CCO34_RS06850;product=imidazolonepropionase;protein_id=WP_001249484.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 546073 547014 . + . ID=gene-CCO34_RS06855;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CCO34_RS06855;old_locus_tag=CCO34_06855 NZ_NPMD01000002.1 Protein Homology CDS 546073 547014 . + 0 ID=cds-WP_000195688.1;Parent=gene-CCO34_RS06855;Dbxref=GenBank:WP_000195688.1;Name=WP_000195688.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=CCO34_RS06855;product=formimidoylglutamase;protein_id=WP_000195688.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 547059 547784 . + . ID=gene-CCO34_RS06860;Name=CCO34_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06860;old_locus_tag=CCO34_06860 NZ_NPMD01000002.1 Protein Homology CDS 547059 547784 . + 0 ID=cds-WP_000287412.1;Parent=gene-CCO34_RS06860;Dbxref=GenBank:WP_000287412.1;Name=WP_000287412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=CCO34_RS06860;product=histidine utilization repressor;protein_id=WP_000287412.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 547981 549666 . + . ID=gene-CCO34_RS06865;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CCO34_RS06865;old_locus_tag=CCO34_06865 NZ_NPMD01000002.1 Protein Homology CDS 547981 549666 . + 0 ID=cds-WP_001115217.1;Parent=gene-CCO34_RS06865;Dbxref=GenBank:WP_001115217.1;Name=WP_001115217.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=CCO34_RS06865;product=urocanate hydratase;protein_id=WP_001115217.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 549668 551188 . + . ID=gene-CCO34_RS06870;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CCO34_RS06870;old_locus_tag=CCO34_06870 NZ_NPMD01000002.1 Protein Homology CDS 549668 551188 . + 0 ID=cds-WP_001095242.1;Parent=gene-CCO34_RS06870;Dbxref=GenBank:WP_001095242.1;Name=WP_001095242.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=CCO34_RS06870;product=histidine ammonia-lyase;protein_id=WP_001095242.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 551273 551749 . - . ID=gene-CCO34_RS06875;Name=CCO34_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06875;old_locus_tag=CCO34_06875 NZ_NPMD01000002.1 Protein Homology CDS 551273 551749 . - 0 ID=cds-WP_000767403.1;Parent=gene-CCO34_RS06875;Dbxref=GenBank:WP_000767403.1;Name=WP_000767403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=CCO34_RS06875;product=kinase inhibitor;protein_id=WP_000767403.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 551807 553096 . - . ID=gene-CCO34_RS06880;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CCO34_RS06880;old_locus_tag=CCO34_06880 NZ_NPMD01000002.1 Protein Homology CDS 551807 553096 . - 0 ID=cds-WP_001523022.1;Parent=gene-CCO34_RS06880;Dbxref=GenBank:WP_001523022.1;Name=WP_001523022.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=CCO34_RS06880;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_001523022.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 553183 554223 . + . ID=gene-CCO34_RS06885;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CCO34_RS06885;old_locus_tag=CCO34_06885 NZ_NPMD01000002.1 Protein Homology CDS 553183 554223 . + 0 ID=cds-WP_000090729.1;Parent=gene-CCO34_RS06885;Dbxref=GenBank:WP_000090729.1;Name=WP_000090729.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=CCO34_RS06885;product=biotin synthase BioB;protein_id=WP_000090729.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 554220 555377 . + . ID=gene-CCO34_RS06890;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=CCO34_RS06890;old_locus_tag=CCO34_06890 NZ_NPMD01000002.1 Protein Homology CDS 554220 555377 . + 0 ID=cds-WP_023228845.1;Parent=gene-CCO34_RS06890;Dbxref=GenBank:WP_023228845.1;Name=WP_023228845.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=CCO34_RS06890;product=8-amino-7-oxononanoate synthase;protein_id=WP_023228845.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 555361 556116 . + . ID=gene-CCO34_RS06895;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=CCO34_RS06895;old_locus_tag=CCO34_06895 NZ_NPMD01000002.1 Protein Homology CDS 555361 556116 . + 0 ID=cds-WP_000079909.1;Parent=gene-CCO34_RS06895;Dbxref=GenBank:WP_000079909.1;Name=WP_000079909.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=CCO34_RS06895;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079909.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 556109 556795 . + . ID=gene-CCO34_RS06900;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO34_RS06900;old_locus_tag=CCO34_06900 NZ_NPMD01000002.1 Protein Homology CDS 556109 556795 . + 0 ID=cds-WP_001616933.1;Parent=gene-CCO34_RS06900;Dbxref=GenBank:WP_001616933.1;Name=WP_001616933.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=CCO34_RS06900;product=dethiobiotin synthase;protein_id=WP_001616933.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 557446 559467 . + . ID=gene-CCO34_RS06910;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CCO34_RS06910;old_locus_tag=CCO34_06910 NZ_NPMD01000002.1 Protein Homology CDS 557446 559467 . + 0 ID=cds-WP_000042502.1;Parent=gene-CCO34_RS06910;Dbxref=GenBank:WP_000042502.1;Name=WP_000042502.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=CCO34_RS06910;product=excinuclease ABC subunit UvrB;protein_id=WP_000042502.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 559775 559949 . + . ID=gene-CCO34_RS25755;Name=CCO34_RS25755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25755;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 559775 559949 . + 0 ID=cds-CCO34_RS25755;Parent=gene-CCO34_RS25755;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=CCO34_RS25755;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 559957 562221 . + . ID=gene-CCO34_RS06915;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=CCO34_RS06915;old_locus_tag=CCO34_06915 NZ_NPMD01000002.1 Protein Homology CDS 559957 562221 . + 0 ID=cds-WP_023228846.1;Parent=gene-CCO34_RS06915;Dbxref=GenBank:WP_023228846.1;Name=WP_023228846.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523006.1;locus_tag=CCO34_RS06915;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_023228846.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 562316 563224 . - . ID=gene-CCO34_RS06920;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=CCO34_RS06920;old_locus_tag=CCO34_06920 NZ_NPMD01000002.1 Protein Homology CDS 562316 563224 . - 0 ID=cds-WP_001246033.1;Parent=gene-CCO34_RS06920;Dbxref=GenBank:WP_001246033.1;Name=WP_001246033.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=CCO34_RS06920;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246033.1;transl_table=11 NZ_NPMD01000002.1 cmsearch riboswitch 563489 563633 . + . ID=id-NZ_NPMD01000002.1:563489..563633;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMD01000002.1 RefSeq gene 563621 564610 . + . ID=gene-CCO34_RS06925;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CCO34_RS06925;old_locus_tag=CCO34_06925 NZ_NPMD01000002.1 Protein Homology CDS 563621 564610 . + 0 ID=cds-WP_000168177.1;Parent=gene-CCO34_RS06925;Dbxref=GenBank:WP_000168177.1;Name=WP_000168177.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=CCO34_RS06925;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168177.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 564632 565144 . + . ID=gene-CCO34_RS06930;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=CCO34_RS06930;old_locus_tag=CCO34_06930 NZ_NPMD01000002.1 Protein Homology CDS 564632 565144 . + 0 ID=cds-WP_000084604.1;Parent=gene-CCO34_RS06930;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=CCO34_RS06930;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 565147 565632 . + . ID=gene-CCO34_RS06935;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CCO34_RS06935;old_locus_tag=CCO34_06935 NZ_NPMD01000002.1 Protein Homology CDS 565147 565632 . + 0 ID=cds-WP_000080894.1;Parent=gene-CCO34_RS06935;Dbxref=GenBank:WP_000080894.1;Name=WP_000080894.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=CCO34_RS06935;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080894.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 565625 565870 . + . ID=gene-CCO34_RS06940;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=CCO34_RS06940;old_locus_tag=CCO34_06940 NZ_NPMD01000002.1 Protein Homology CDS 565625 565870 . + 0 ID=cds-WP_000598597.1;Parent=gene-CCO34_RS06940;Dbxref=GenBank:WP_000598597.1;Name=WP_000598597.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=CCO34_RS06940;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598597.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 565872 566324 . + . ID=gene-CCO34_RS06945;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=CCO34_RS06945;old_locus_tag=CCO34_06945 NZ_NPMD01000002.1 Protein Homology CDS 565872 566324 . + 0 ID=cds-WP_001209384.1;Parent=gene-CCO34_RS06945;Dbxref=GenBank:WP_001209384.1;Name=WP_001209384.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=CCO34_RS06945;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_001209384.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 566372 567076 . + . ID=gene-CCO34_RS06950;Name=CCO34_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06950;old_locus_tag=CCO34_06950 NZ_NPMD01000002.1 Protein Homology CDS 566372 567076 . + 0 ID=cds-WP_000373611.1;Parent=gene-CCO34_RS06950;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=CCO34_RS06950;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 567221 567928 . + . ID=gene-CCO34_RS06960;Name=CCO34_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06960;old_locus_tag=CCO34_06960 NZ_NPMD01000002.1 Protein Homology CDS 567221 567928 . + 0 ID=cds-WP_000529062.1;Parent=gene-CCO34_RS06960;Dbxref=GenBank:WP_000529062.1;Name=WP_000529062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=CCO34_RS06960;product=Bax inhibitor-1 family protein;protein_id=WP_000529062.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 567952 568560 . + . ID=gene-CCO34_RS06965;Name=CCO34_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06965;old_locus_tag=CCO34_06965 NZ_NPMD01000002.1 Protein Homology CDS 567952 568560 . + 0 ID=cds-WP_001574057.1;Parent=gene-CCO34_RS06965;Dbxref=GenBank:WP_001574057.1;Name=WP_001574057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=CCO34_RS06965;product=hypothetical protein;protein_id=WP_001574057.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 568568 569128 . + . ID=gene-CCO34_RS06970;Name=CCO34_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06970;old_locus_tag=CCO34_06970 NZ_NPMD01000002.1 Protein Homology CDS 568568 569128 . + 0 ID=cds-WP_001052196.1;Parent=gene-CCO34_RS06970;Dbxref=GenBank:WP_001052196.1;Name=WP_001052196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=CCO34_RS06970;product=hypothetical protein;protein_id=WP_001052196.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 569131 570093 . - . ID=gene-CCO34_RS06975;Name=CCO34_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06975;old_locus_tag=CCO34_06975 NZ_NPMD01000002.1 Protein Homology CDS 569131 570093 . - 0 ID=cds-WP_001129817.1;Parent=gene-CCO34_RS06975;Dbxref=GenBank:WP_001129817.1;Name=WP_001129817.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=CCO34_RS06975;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_001129817.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 570093 571334 . - . ID=gene-CCO34_RS06980;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=CCO34_RS06980;old_locus_tag=CCO34_06980 NZ_NPMD01000002.1 Protein Homology CDS 570093 571334 . - 0 ID=cds-WP_000649639.1;Parent=gene-CCO34_RS06980;Dbxref=GenBank:WP_000649639.1;Name=WP_000649639.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=CCO34_RS06980;product=cardiolipin synthase ClsB;protein_id=WP_000649639.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 571331 572089 . - . ID=gene-CCO34_RS06985;Name=CCO34_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06985;old_locus_tag=CCO34_06985 NZ_NPMD01000002.1 Protein Homology CDS 571331 572089 . - 0 ID=cds-WP_000192039.1;Parent=gene-CCO34_RS06985;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=CCO34_RS06985;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 572222 572632 . + . ID=gene-CCO34_RS06990;Name=CCO34_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06990;old_locus_tag=CCO34_06990 NZ_NPMD01000002.1 Protein Homology CDS 572222 572632 . + 0 ID=cds-WP_000871970.1;Parent=gene-CCO34_RS06990;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=CCO34_RS06990;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 572594 573700 . - . ID=gene-CCO34_RS06995;Name=CCO34_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS06995;old_locus_tag=CCO34_06995 NZ_NPMD01000002.1 Protein Homology CDS 572594 573700 . - 0 ID=cds-WP_000469050.1;Parent=gene-CCO34_RS06995;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=CCO34_RS06995;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 573816 574946 . - . ID=gene-CCO34_RS07000;Name=CCO34_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07000;old_locus_tag=CCO34_07000 NZ_NPMD01000002.1 Protein Homology CDS 573816 574946 . - 0 ID=cds-WP_000045765.1;Parent=gene-CCO34_RS07000;Dbxref=GenBank:WP_000045765.1;Name=WP_000045765.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=CCO34_RS07000;product=ABC transporter permease;protein_id=WP_000045765.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 574939 576675 . - . ID=gene-CCO34_RS07005;Name=CCO34_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07005;old_locus_tag=CCO34_07005 NZ_NPMD01000002.1 Protein Homology CDS 574939 576675 . - 0 ID=cds-WP_023228830.1;Parent=gene-CCO34_RS07005;Dbxref=GenBank:WP_023228830.1;Name=WP_023228830.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=CCO34_RS07005;product=ATP-binding cassette domain-containing protein;protein_id=WP_023228830.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 576668 577663 . - . ID=gene-CCO34_RS07010;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=CCO34_RS07010;old_locus_tag=CCO34_07010 NZ_NPMD01000002.1 Protein Homology CDS 576668 577663 . - 0 ID=cds-WP_000743434.1;Parent=gene-CCO34_RS07010;Dbxref=GenBank:WP_000743434.1;Name=WP_000743434.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=CCO34_RS07010;product=secretion protein HlyD;protein_id=WP_000743434.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 577663 578337 . - . ID=gene-CCO34_RS07015;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=CCO34_RS07015;old_locus_tag=CCO34_07015 NZ_NPMD01000002.1 Protein Homology CDS 577663 578337 . - 0 ID=cds-WP_001025254.1;Parent=gene-CCO34_RS07015;Dbxref=GenBank:WP_001025254.1;Name=WP_001025254.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=CCO34_RS07015;product=transcriptional regulator CecR;protein_id=WP_001025254.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 578567 579928 . + . ID=gene-CCO34_RS07020;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=CCO34_RS07020;old_locus_tag=CCO34_07020 NZ_NPMD01000002.1 Protein Homology CDS 578567 579928 . + 0 ID=cds-WP_000007065.1;Parent=gene-CCO34_RS07020;Dbxref=GenBank:WP_000007065.1;Name=WP_000007065.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=CCO34_RS07020;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007065.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 580136 582280 . + . ID=gene-CCO34_RS07025;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=CCO34_RS07025;old_locus_tag=CCO34_07025 NZ_NPMD01000002.1 Protein Homology CDS 580136 582280 . + 0 ID=cds-WP_001218630.1;Parent=gene-CCO34_RS07025;Dbxref=GenBank:WP_001218630.1;Name=WP_001218630.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=CCO34_RS07025;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218630.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 582310 583284 . + . ID=gene-CCO34_RS07030;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=CCO34_RS07030;old_locus_tag=CCO34_07030 NZ_NPMD01000002.1 Protein Homology CDS 582310 583284 . + 0 ID=cds-WP_000386499.1;Parent=gene-CCO34_RS07030;Dbxref=GenBank:WP_000386499.1;Name=WP_000386499.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=CCO34_RS07030;product=DNA-binding protein YbiB;protein_id=WP_000386499.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 583440 583700 . - . ID=gene-CCO34_RS07035;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=CCO34_RS07035;old_locus_tag=CCO34_07035 NZ_NPMD01000002.1 Protein Homology CDS 583440 583700 . - 0 ID=cds-WP_000849089.1;Parent=gene-CCO34_RS07035;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=CCO34_RS07035;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 583985 584251 . - . ID=gene-CCO34_RS07040;Name=CCO34_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07040;old_locus_tag=CCO34_07040 NZ_NPMD01000002.1 Protein Homology CDS 583985 584251 . - 0 ID=cds-WP_000146332.1;Parent=gene-CCO34_RS07040;Dbxref=GenBank:WP_000146332.1;Name=WP_000146332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=CCO34_RS07040;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146332.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 584456 585382 . + . ID=gene-CCO34_RS07045;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=CCO34_RS07045;old_locus_tag=CCO34_07045 NZ_NPMD01000002.1 Protein Homology CDS 584456 585382 . + 0 ID=cds-WP_001275962.1;Parent=gene-CCO34_RS07045;Dbxref=GenBank:WP_001275962.1;Name=WP_001275962.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=CCO34_RS07045;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275962.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 585379 587601 . - . ID=gene-CCO34_RS07050;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=CCO34_RS07050;old_locus_tag=CCO34_07050 NZ_NPMD01000002.1 Protein Homology CDS 585379 587601 . - 0 ID=cds-WP_001267716.1;Parent=gene-CCO34_RS07050;Dbxref=GenBank:WP_001267716.1;Name=WP_001267716.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=CCO34_RS07050;product=mechanosensitive channel protein;protein_id=WP_001267716.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 587720 588442 . - . ID=gene-CCO34_RS07055;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=CCO34_RS07055;old_locus_tag=CCO34_07055 NZ_NPMD01000002.1 Protein Homology CDS 587720 588442 . - 0 ID=cds-WP_000569093.1;Parent=gene-CCO34_RS07055;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=CCO34_RS07055;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 588439 589098 . - . ID=gene-CCO34_RS07060;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=CCO34_RS07060;old_locus_tag=CCO34_07060 NZ_NPMD01000002.1 Protein Homology CDS 588439 589098 . - 0 ID=cds-WP_001159076.1;Parent=gene-CCO34_RS07060;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=CCO34_RS07060;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 589244 589990 . - . ID=gene-CCO34_RS07065;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=CCO34_RS07065;old_locus_tag=CCO34_07065 NZ_NPMD01000002.1 Protein Homology CDS 589244 589990 . - 0 ID=cds-WP_000838671.1;Parent=gene-CCO34_RS07065;Dbxref=GenBank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=CCO34_RS07065;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 590467 590970 . - . ID=gene-CCO34_RS07070;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=CCO34_RS07070;old_locus_tag=CCO34_07070 NZ_NPMD01000002.1 Protein Homology CDS 590467 590970 . - 0 ID=cds-WP_000100805.1;Parent=gene-CCO34_RS07070;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=CCO34_RS07070;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 591273 592160 . - . ID=gene-CCO34_RS07075;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=CCO34_RS07075;old_locus_tag=CCO34_07075 NZ_NPMD01000002.1 Protein Homology CDS 591273 592160 . - 0 ID=cds-WP_001119555.1;Parent=gene-CCO34_RS07075;Dbxref=GenBank:WP_001119555.1;Name=WP_001119555.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=CCO34_RS07075;product=threonine/homoserine exporter RhtA;protein_id=WP_001119555.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 592514 593029 . + . ID=gene-CCO34_RS07080;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=CCO34_RS07080;old_locus_tag=CCO34_07080 NZ_NPMD01000002.1 Protein Homology CDS 592514 593029 . + 0 ID=cds-WP_000716763.1;Parent=gene-CCO34_RS07080;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=CCO34_RS07080;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 593092 594672 . - . ID=gene-CCO34_RS07085;Name=CCO34_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07085;old_locus_tag=CCO34_07085 NZ_NPMD01000002.1 Protein Homology CDS 593092 594672 . - 0 ID=cds-WP_001089327.1;Parent=gene-CCO34_RS07085;Dbxref=GenBank:WP_001089327.1;Name=WP_001089327.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=CCO34_RS07085;product=phosphoethanolamine transferase;protein_id=WP_001089327.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 594937 595065 . - . ID=gene-CCO34_RS07090;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=CCO34_RS07090;old_locus_tag=CCO34_07090 NZ_NPMD01000002.1 Protein Homology CDS 594937 595065 . - 0 ID=cds-WP_001001755.1;Parent=gene-CCO34_RS07090;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=CCO34_RS07090;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 595251 595724 . + . ID=gene-CCO34_RS07095;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=CCO34_RS07095;old_locus_tag=CCO34_07095 NZ_NPMD01000002.1 Protein Homology CDS 595251 595724 . + 0 ID=cds-WP_000533542.1;Parent=gene-CCO34_RS07095;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=CCO34_RS07095;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 595721 596833 . + . ID=gene-CCO34_RS07100;Name=CCO34_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07100;old_locus_tag=CCO34_07100 NZ_NPMD01000002.1 Protein Homology CDS 595721 596833 . + 0 ID=cds-WP_001046525.1;Parent=gene-CCO34_RS07100;Dbxref=GenBank:WP_001046525.1;Name=WP_001046525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=CCO34_RS07100;product=anion transporter;protein_id=WP_001046525.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 596877 597797 . - . ID=gene-CCO34_RS07105;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=CCO34_RS07105;old_locus_tag=CCO34_07105 NZ_NPMD01000002.1 Protein Homology CDS 596877 597797 . - 0 ID=cds-WP_001056404.1;Parent=gene-CCO34_RS07105;Dbxref=GenBank:WP_001056404.1;Name=WP_001056404.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=CCO34_RS07105;product=L%2CD-transpeptidase;protein_id=WP_001056404.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 598016 599608 . + . ID=gene-CCO34_RS07110;Name=CCO34_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07110;old_locus_tag=CCO34_07110 NZ_NPMD01000002.1 Protein Homology CDS 598016 599608 . + 0 ID=cds-WP_000961479.1;Parent=gene-CCO34_RS07110;Dbxref=GenBank:WP_000961479.1;Name=WP_000961479.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=CCO34_RS07110;product=ABC-F family ATPase;protein_id=WP_000961479.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 600217 600960 . + . ID=gene-CCO34_RS07115;Name=CCO34_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07115;old_locus_tag=CCO34_07115 NZ_NPMD01000002.1 Protein Homology CDS 600217 600960 . + 0 ID=cds-WP_077906075.1;Parent=gene-CCO34_RS07115;Dbxref=GenBank:WP_077906075.1;Name=WP_077906075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=CCO34_RS07115;product=DUF4261 domain-containing protein;protein_id=WP_077906075.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 600989 601717 . - . ID=gene-CCO34_RS07120;Name=CCO34_RS07120;end_range=601717,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS07120;old_locus_tag=CCO34_07120;partial=true;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 600989 601717 . - 0 ID=cds-CCO34_RS07120;Parent=gene-CCO34_RS07120;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;end_range=601717,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=CCO34_RS07120;partial=true;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 601708 601791 . + . ID=gene-CCO34_RS26180;Name=CCO34_RS26180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26180;partial=true;pseudo=true;start_range=.,601708 NZ_NPMD01000002.1 Protein Homology CDS 601708 601791 . + 0 ID=cds-CCO34_RS26180;Parent=gene-CCO34_RS26180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=CCO34_RS26180;partial=true;product=hypothetical protein;pseudo=true;start_range=.,601708;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 601913 603178 . - . ID=gene-CCO34_RS07125;Name=CCO34_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07125;old_locus_tag=CCO34_07125 NZ_NPMD01000002.1 Protein Homology CDS 601913 603178 . - 0 ID=cds-WP_001586229.1;Parent=gene-CCO34_RS07125;Dbxref=GenBank:WP_001586229.1;Name=WP_001586229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=CCO34_RS07125;product=DUF1479 domain-containing protein;protein_id=WP_001586229.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 603440 604249 . + . ID=gene-CCO34_RS07130;Name=CCO34_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07130;old_locus_tag=CCO34_07130 NZ_NPMD01000002.1 Protein Homology CDS 603440 604249 . + 0 ID=cds-WP_000217910.1;Parent=gene-CCO34_RS07130;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=CCO34_RS07130;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 604327 606759 . - . ID=gene-CCO34_RS07135;Name=CCO34_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07135;old_locus_tag=CCO34_07135 NZ_NPMD01000002.1 Protein Homology CDS 604327 606759 . - 0 ID=cds-WP_000057881.1;Parent=gene-CCO34_RS07135;Dbxref=GenBank:WP_000057881.1;Name=WP_000057881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=CCO34_RS07135;product=glycyl radical protein;protein_id=WP_000057881.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 606765 607664 . - . ID=gene-CCO34_RS07140;Name=CCO34_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07140;old_locus_tag=CCO34_07140 NZ_NPMD01000002.1 Protein Homology CDS 606765 607664 . - 0 ID=cds-WP_000576948.1;Parent=gene-CCO34_RS07140;Dbxref=GenBank:WP_000576948.1;Name=WP_000576948.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=CCO34_RS07140;product=glycyl-radical enzyme activating protein;protein_id=WP_000576948.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 607942 608691 . - . ID=gene-CCO34_RS07145;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=CCO34_RS07145;old_locus_tag=CCO34_07145 NZ_NPMD01000002.1 Protein Homology CDS 607942 608691 . - 0 ID=cds-WP_000829280.1;Parent=gene-CCO34_RS07145;Dbxref=GenBank:WP_000829280.1;Name=WP_000829280.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=CCO34_RS07145;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829280.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 608691 609926 . - . ID=gene-CCO34_RS07150;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=CCO34_RS07150;old_locus_tag=CCO34_07150 NZ_NPMD01000002.1 Protein Homology CDS 608691 609926 . - 0 ID=cds-WP_000395782.1;Parent=gene-CCO34_RS07150;Dbxref=GenBank:WP_000395782.1;Name=WP_000395782.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=CCO34_RS07150;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000395782.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 610129 611070 . + . ID=gene-CCO34_RS07155;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=CCO34_RS07155;old_locus_tag=CCO34_07155 NZ_NPMD01000002.1 Protein Homology CDS 610129 611070 . + 0 ID=cds-WP_001030503.1;Parent=gene-CCO34_RS07155;Dbxref=GenBank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=CCO34_RS07155;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 611081 612952 . + . ID=gene-CCO34_RS07160;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=CCO34_RS07160;old_locus_tag=CCO34_07160 NZ_NPMD01000002.1 Protein Homology CDS 611081 612952 . + 0 ID=cds-WP_001120594.1;Parent=gene-CCO34_RS07160;Dbxref=GenBank:WP_001120594.1;Name=WP_001120594.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=CCO34_RS07160;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001120594.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 612985 614523 . + . ID=gene-CCO34_RS07165;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=CCO34_RS07165;old_locus_tag=CCO34_07165 NZ_NPMD01000002.1 Protein Homology CDS 612985 614523 . + 0 ID=cds-WP_000191444.1;Parent=gene-CCO34_RS07165;Dbxref=GenBank:WP_000191444.1;Name=WP_000191444.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=CCO34_RS07165;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191444.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 614584 615504 . + . ID=gene-CCO34_RS07170;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=CCO34_RS07170;old_locus_tag=CCO34_07170 NZ_NPMD01000002.1 Protein Homology CDS 614584 615504 . + 0 ID=cds-WP_000936067.1;Parent=gene-CCO34_RS07170;Dbxref=GenBank:WP_000936067.1;Name=WP_000936067.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=CCO34_RS07170;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936067.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 615507 616418 . + . ID=gene-CCO34_RS07175;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=CCO34_RS07175;old_locus_tag=CCO34_07175 NZ_NPMD01000002.1 Protein Homology CDS 615507 616418 . + 0 ID=cds-WP_001236024.1;Parent=gene-CCO34_RS07175;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=CCO34_RS07175;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 616509 617834 . - . ID=gene-CCO34_RS07180;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=CCO34_RS07180;old_locus_tag=CCO34_07180 NZ_NPMD01000002.1 Protein Homology CDS 616509 617834 . - 0 ID=cds-WP_000073317.1;Parent=gene-CCO34_RS07180;Dbxref=GenBank:WP_000073317.1;Name=WP_000073317.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=CCO34_RS07180;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073317.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 618065 618448 . + . ID=gene-CCO34_RS07185;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=CCO34_RS07185;old_locus_tag=CCO34_07185 NZ_NPMD01000002.1 Protein Homology CDS 618065 618448 . + 0 ID=cds-WP_000259653.1;Parent=gene-CCO34_RS07185;Dbxref=GenBank:WP_000259653.1;Name=WP_000259653.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=CCO34_RS07185;product=biofilm formation regulator BssR;protein_id=WP_000259653.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 618551 618836 . + . ID=gene-CCO34_RS25760;Name=CCO34_RS25760;end_range=618836,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25760;old_locus_tag=CCO34_07190;partial=true;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 618551 618836 . + 0 ID=cds-CCO34_RS25760;Parent=gene-CCO34_RS25760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=618836,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=CCO34_RS25760;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 619162 619677 . + . ID=gene-CCO34_RS07195;Name=CCO34_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07195;old_locus_tag=CCO34_07195 NZ_NPMD01000002.1 Protein Homology CDS 619162 619677 . + 0 ID=cds-WP_001521476.1;Parent=gene-CCO34_RS07195;Dbxref=GenBank:WP_001521476.1;Name=WP_001521476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=CCO34_RS07195;product=STM0854 family CoA ester lyase;protein_id=WP_001521476.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 619700 620449 . + . ID=gene-CCO34_RS07200;Name=CCO34_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07200;old_locus_tag=CCO34_07200 NZ_NPMD01000002.1 Protein Homology CDS 619700 620449 . + 0 ID=cds-WP_001523061.1;Parent=gene-CCO34_RS07200;Dbxref=GenBank:WP_001523061.1;Name=WP_001523061.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003461132.1;locus_tag=CCO34_RS07200;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001523061.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 620460 621413 . + . ID=gene-CCO34_RS07205;Name=CCO34_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07205;old_locus_tag=CCO34_07205 NZ_NPMD01000002.1 Protein Homology CDS 620460 621413 . + 0 ID=cds-WP_000157772.1;Parent=gene-CCO34_RS07205;Dbxref=GenBank:WP_000157772.1;Name=WP_000157772.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=CCO34_RS07205;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_000157772.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 621446 621694 . + . ID=gene-CCO34_RS07210;Name=CCO34_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07210;old_locus_tag=CCO34_07210 NZ_NPMD01000002.1 GeneMarkS-2+ CDS 621446 621694 . + 0 ID=cds-WP_023228833.1;Parent=gene-CCO34_RS07210;Dbxref=GenBank:WP_023228833.1;Name=WP_023228833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS07210;product=hypothetical protein;protein_id=WP_023228833.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 621705 622868 . + . ID=gene-CCO34_RS07215;Name=CCO34_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07215;old_locus_tag=CCO34_07215 NZ_NPMD01000002.1 Protein Homology CDS 621705 622868 . + 0 ID=cds-WP_000835387.1;Parent=gene-CCO34_RS07215;Dbxref=GenBank:WP_000835387.1;Name=WP_000835387.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=CCO34_RS07215;product=acyl-CoA dehydrogenase family protein;protein_id=WP_000835387.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 623317 625002 . + . ID=gene-CCO34_RS07225;Name=CCO34_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07225;old_locus_tag=CCO34_07225 NZ_NPMD01000002.1 Protein Homology CDS 623317 625002 . + 0 ID=cds-WP_001000306.1;Parent=gene-CCO34_RS07225;Dbxref=GenBank:WP_001000306.1;Name=WP_001000306.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=CCO34_RS07225;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_001000306.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 625008 625898 . - . ID=gene-CCO34_RS07230;Name=CCO34_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07230;old_locus_tag=CCO34_07230 NZ_NPMD01000002.1 Protein Homology CDS 625008 625898 . - 0 ID=cds-WP_000545335.1;Parent=gene-CCO34_RS07230;Dbxref=GenBank:WP_000545335.1;Name=WP_000545335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=CCO34_RS07230;product=LysR family transcriptional regulator;protein_id=WP_000545335.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 626163 626588 . - . ID=gene-CCO34_RS07235;Name=CCO34_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07235;old_locus_tag=CCO34_07235 NZ_NPMD01000002.1 Protein Homology CDS 626163 626588 . - 0 ID=cds-WP_000287110.1;Parent=gene-CCO34_RS07235;Dbxref=GenBank:WP_000287110.1;Name=WP_000287110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=CCO34_RS07235;product=GntP family permease;protein_id=WP_000287110.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 626935 627138 . + . ID=gene-CCO34_RS26185;Name=CCO34_RS26185;end_range=627138,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26185;partial=true;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 626935 627138 . + 0 ID=cds-CCO34_RS26185;Parent=gene-CCO34_RS26185;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313;end_range=627138,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=CCO34_RS26185;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 627124 627626 . + . ID=gene-CCO34_RS26190;Name=CCO34_RS26190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26190;partial=true;pseudo=true;start_range=.,627124 NZ_NPMD01000002.1 Protein Homology CDS 627124 627626 . + 0 ID=cds-CCO34_RS26190;Parent=gene-CCO34_RS26190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000554957.1;locus_tag=CCO34_RS26190;partial=true;product=PQQ-dependent sugar dehydrogenase;pseudo=true;start_range=.,627124;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 627623 628249 . - . ID=gene-CCO34_RS07250;Name=CCO34_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07250;old_locus_tag=CCO34_07250 NZ_NPMD01000002.1 Protein Homology CDS 627623 628249 . - 0 ID=cds-WP_000631907.1;Parent=gene-CCO34_RS07250;Dbxref=GenBank:WP_000631907.1;Name=WP_000631907.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=CCO34_RS07250;product=glutathione S-transferase family protein;protein_id=WP_000631907.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 628493 629695 . + . ID=gene-CCO34_RS07255;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=CCO34_RS07255;old_locus_tag=CCO34_07255 NZ_NPMD01000002.1 Protein Homology CDS 628493 629695 . + 0 ID=cds-WP_000195712.1;Parent=gene-CCO34_RS07255;Dbxref=GenBank:WP_000195712.1;Name=WP_000195712.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=CCO34_RS07255;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195712.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 629740 630498 . - . ID=gene-CCO34_RS07260;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=CCO34_RS07260;old_locus_tag=CCO34_07260 NZ_NPMD01000002.1 Protein Homology CDS 629740 630498 . - 0 ID=cds-WP_000450103.1;Parent=gene-CCO34_RS07260;Dbxref=GenBank:WP_000450103.1;Name=WP_000450103.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=CCO34_RS07260;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450103.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 630570 631178 . - . ID=gene-CCO34_RS07265;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=CCO34_RS07265;old_locus_tag=CCO34_07265 NZ_NPMD01000002.1 Protein Homology CDS 630570 631178 . - 0 ID=cds-WP_001531378.1;Parent=gene-CCO34_RS07265;Dbxref=GenBank:WP_001531378.1;Name=WP_001531378.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=CCO34_RS07265;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001531378.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 631491 632723 . + . ID=gene-CCO34_RS07270;Name=CCO34_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07270;old_locus_tag=CCO34_07270 NZ_NPMD01000002.1 Protein Homology CDS 631491 632723 . + 0 ID=cds-WP_001181279.1;Parent=gene-CCO34_RS07270;Dbxref=GenBank:WP_001181279.1;Name=WP_001181279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=CCO34_RS07270;product=MFS transporter;protein_id=WP_001181279.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 632777 633592 . - . ID=gene-CCO34_RS07275;Name=CCO34_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07275;old_locus_tag=CCO34_07275 NZ_NPMD01000002.1 Protein Homology CDS 632777 633592 . - 0 ID=cds-WP_000023558.1;Parent=gene-CCO34_RS07275;Dbxref=GenBank:WP_000023558.1;Name=WP_000023558.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=CCO34_RS07275;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000023558.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 633589 634800 . - . ID=gene-CCO34_RS07280;Name=CCO34_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07280;old_locus_tag=CCO34_07280 NZ_NPMD01000002.1 Protein Homology CDS 633589 634800 . - 0 ID=cds-WP_000217420.1;Parent=gene-CCO34_RS07280;Dbxref=GenBank:WP_000217420.1;Name=WP_000217420.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=CCO34_RS07280;product=MFS transporter;protein_id=WP_000217420.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 634968 635528 . + . ID=gene-CCO34_RS07285;Name=CCO34_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07285;old_locus_tag=CCO34_07285 NZ_NPMD01000002.1 Protein Homology CDS 634968 635528 . + 0 ID=cds-WP_000661880.1;Parent=gene-CCO34_RS07285;Dbxref=GenBank:WP_000661880.1;Name=WP_000661880.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661880.1;locus_tag=CCO34_RS07285;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661880.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 635705 637390 . - . ID=gene-CCO34_RS07295;Name=CCO34_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07295;old_locus_tag=CCO34_07290 NZ_NPMD01000002.1 Protein Homology CDS 635705 637390 . - 0 ID=cds-WP_001024853.1;Parent=gene-CCO34_RS07295;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=CCO34_RS07295;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 637661 638038 . + . ID=gene-CCO34_RS07300;Name=CCO34_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07300;old_locus_tag=CCO34_07295 NZ_NPMD01000002.1 Protein Homology CDS 637661 638038 . + 0 ID=cds-WP_000680850.1;Parent=gene-CCO34_RS07300;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=CCO34_RS07300;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 638070 638333 . - . ID=gene-CCO34_RS07305;Name=CCO34_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07305;old_locus_tag=CCO34_07300 NZ_NPMD01000002.1 Protein Homology CDS 638070 638333 . - 0 ID=cds-WP_000495513.1;Parent=gene-CCO34_RS07305;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=CCO34_RS07305;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 638503 638793 . + . ID=gene-CCO34_RS07310;Name=CCO34_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07310;old_locus_tag=CCO34_07305 NZ_NPMD01000002.1 Protein Homology CDS 638503 638793 . + 0 ID=cds-WP_001259135.1;Parent=gene-CCO34_RS07310;Dbxref=GenBank:WP_001259135.1;Name=WP_001259135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=CCO34_RS07310;product=YbjC family protein;protein_id=WP_001259135.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 638777 639499 . + . ID=gene-CCO34_RS07315;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CCO34_RS07315;old_locus_tag=CCO34_07310 NZ_NPMD01000002.1 Protein Homology CDS 638777 639499 . + 0 ID=cds-WP_000075300.1;Parent=gene-CCO34_RS07315;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=CCO34_RS07315;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 639557 640459 . + . ID=gene-CCO34_RS07320;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=CCO34_RS07320;old_locus_tag=CCO34_07315 NZ_NPMD01000002.1 Protein Homology CDS 639557 640459 . + 0 ID=cds-WP_000684361.1;Parent=gene-CCO34_RS07320;Dbxref=GenBank:WP_000684361.1;Name=WP_000684361.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=CCO34_RS07320;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 640556 641032 . + . ID=gene-CCO34_RS07325;Name=CCO34_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07325;old_locus_tag=CCO34_07320 NZ_NPMD01000002.1 Protein Homology CDS 640556 641032 . + 0 ID=cds-WP_000624814.1;Parent=gene-CCO34_RS07325;Dbxref=GenBank:WP_000624814.1;Name=WP_000624814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=CCO34_RS07325;product=YbjN domain-containing protein;protein_id=WP_000624814.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 641381 642493 . + . ID=gene-CCO34_RS07330;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=CCO34_RS07330;old_locus_tag=CCO34_07325 NZ_NPMD01000002.1 Protein Homology CDS 641381 642493 . + 0 ID=cds-WP_000125769.1;Parent=gene-CCO34_RS07330;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=CCO34_RS07330;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 642581 643714 . + . ID=gene-CCO34_RS07335;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=CCO34_RS07335;old_locus_tag=CCO34_07330 NZ_NPMD01000002.1 Protein Homology CDS 642581 643714 . + 0 ID=cds-WP_001000698.1;Parent=gene-CCO34_RS07335;Dbxref=GenBank:WP_001000698.1;Name=WP_001000698.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=CCO34_RS07335;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000698.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 643724 644677 . + . ID=gene-CCO34_RS07340;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=CCO34_RS07340;old_locus_tag=CCO34_07335 NZ_NPMD01000002.1 Protein Homology CDS 643724 644677 . + 0 ID=cds-WP_000105453.1;Parent=gene-CCO34_RS07340;Dbxref=GenBank:WP_000105453.1;Name=WP_000105453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=CCO34_RS07340;product=putrescine ABC transporter permease PotH;protein_id=WP_000105453.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 644674 645519 . + . ID=gene-CCO34_RS07345;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=CCO34_RS07345;old_locus_tag=CCO34_07340 NZ_NPMD01000002.1 Protein Homology CDS 644674 645519 . + 0 ID=cds-WP_001061629.1;Parent=gene-CCO34_RS07345;Dbxref=GenBank:WP_001061629.1;Name=WP_001061629.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=CCO34_RS07345;product=putrescine ABC transporter permease PotI;protein_id=WP_001061629.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 645593 646066 . + . ID=gene-CCO34_RS07350;Name=CCO34_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07350;old_locus_tag=CCO34_07345 NZ_NPMD01000002.1 Protein Homology CDS 645593 646066 . + 0 ID=cds-WP_000505788.1;Parent=gene-CCO34_RS07350;Dbxref=GenBank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=CCO34_RS07350;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 646109 647236 . + . ID=gene-CCO34_RS07355;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=CCO34_RS07355;old_locus_tag=CCO34_07350 NZ_NPMD01000002.1 Protein Homology CDS 646109 647236 . + 0 ID=cds-WP_001149780.1;Parent=gene-CCO34_RS07355;Dbxref=GenBank:WP_001149780.1;Name=WP_001149780.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=CCO34_RS07355;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149780.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 647531 648874 . + . ID=gene-CCO34_RS07360;Name=CCO34_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07360;old_locus_tag=CCO34_07355 NZ_NPMD01000002.1 Protein Homology CDS 647531 648874 . + 0 ID=cds-WP_000399323.1;Parent=gene-CCO34_RS07360;Dbxref=GenBank:WP_000399323.1;Name=WP_000399323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=CCO34_RS07360;product=PTS sugar transporter subunit IIC;protein_id=WP_000399323.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 648904 649224 . + . ID=gene-CCO34_RS07365;Name=CCO34_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07365;old_locus_tag=CCO34_07360 NZ_NPMD01000002.1 Protein Homology CDS 648904 649224 . + 0 ID=cds-WP_000655399.1;Parent=gene-CCO34_RS07365;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=CCO34_RS07365;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 649234 650721 . + . ID=gene-CCO34_RS07370;Name=CCO34_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07370;old_locus_tag=CCO34_07365 NZ_NPMD01000002.1 Protein Homology CDS 649234 650721 . + 0 ID=cds-WP_000644019.1;Parent=gene-CCO34_RS07370;Dbxref=GenBank:WP_000644019.1;Name=WP_000644019.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=CCO34_RS07370;product=sulfatase;protein_id=WP_000644019.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 650939 651670 . - . ID=gene-CCO34_RS07380;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=CCO34_RS07380;old_locus_tag=CCO34_07375 NZ_NPMD01000002.1 Protein Homology CDS 650939 651670 . - 0 ID=cds-WP_000737538.1;Parent=gene-CCO34_RS07380;Dbxref=GenBank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=CCO34_RS07380;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737538.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 651907 652575 . - . ID=gene-CCO34_RS07385;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=CCO34_RS07385;old_locus_tag=CCO34_07380 NZ_NPMD01000002.1 Protein Homology CDS 651907 652575 . - 0 ID=cds-WP_000895396.1;Parent=gene-CCO34_RS07385;Dbxref=GenBank:WP_000895396.1;Name=WP_000895396.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=CCO34_RS07385;product=arginine ABC transporter permease ArtM;protein_id=WP_000895396.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 652575 653291 . - . ID=gene-CCO34_RS07390;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=CCO34_RS07390;old_locus_tag=CCO34_07385 NZ_NPMD01000002.1 Protein Homology CDS 652575 653291 . - 0 ID=cds-WP_001001677.1;Parent=gene-CCO34_RS07390;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=CCO34_RS07390;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 653298 654029 . - . ID=gene-CCO34_RS07395;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=CCO34_RS07395;old_locus_tag=CCO34_07390 NZ_NPMD01000002.1 Protein Homology CDS 653298 654029 . - 0 ID=cds-WP_000756586.1;Parent=gene-CCO34_RS07395;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=CCO34_RS07395;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 654047 654775 . - . ID=gene-CCO34_RS07400;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=CCO34_RS07400;old_locus_tag=CCO34_07395 NZ_NPMD01000002.1 Protein Homology CDS 654047 654775 . - 0 ID=cds-WP_000027186.1;Parent=gene-CCO34_RS07400;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=CCO34_RS07400;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 655004 655519 . - . ID=gene-CCO34_RS07405;Name=CCO34_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07405;old_locus_tag=CCO34_07400 NZ_NPMD01000002.1 Protein Homology CDS 655004 655519 . - 0 ID=cds-WP_001270724.1;Parent=gene-CCO34_RS07405;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=CCO34_RS07405;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 655647 655970 . + . ID=gene-CCO34_RS07410;Name=CCO34_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07410;old_locus_tag=CCO34_07405 NZ_NPMD01000002.1 Protein Homology CDS 655647 655970 . + 0 ID=cds-WP_001160725.1;Parent=gene-CCO34_RS07410;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO34_RS07410;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 655967 656797 . + . ID=gene-CCO34_RS07415;Name=CCO34_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07415;old_locus_tag=CCO34_07410 NZ_NPMD01000002.1 Protein Homology CDS 655967 656797 . + 0 ID=cds-WP_023203679.1;Parent=gene-CCO34_RS07415;Dbxref=GenBank:WP_023203679.1;Name=WP_023203679.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=CCO34_RS07415;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_023203679.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 656794 657807 . - . ID=gene-CCO34_RS07420;Name=CCO34_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07420;old_locus_tag=CCO34_07415 NZ_NPMD01000002.1 Protein Homology CDS 656794 657807 . - 0 ID=cds-WP_000866904.1;Parent=gene-CCO34_RS07420;Dbxref=GenBank:WP_000866904.1;Name=WP_000866904.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=CCO34_RS07420;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_000866904.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 657903 659336 . - . ID=gene-CCO34_RS07425;Name=CCO34_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07425;old_locus_tag=CCO34_07420 NZ_NPMD01000002.1 Protein Homology CDS 657903 659336 . - 0 ID=cds-WP_000079017.1;Parent=gene-CCO34_RS07425;Dbxref=GenBank:WP_000079017.1;Name=WP_000079017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=CCO34_RS07425;product=SDR family oxidoreductase;protein_id=WP_000079017.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 659347 660348 . - . ID=gene-CCO34_RS07430;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=CCO34_RS07430;old_locus_tag=CCO34_07425 NZ_NPMD01000002.1 Protein Homology CDS 659347 660348 . - 0 ID=cds-WP_000566422.1;Parent=gene-CCO34_RS07430;Dbxref=GenBank:WP_000566422.1;Name=WP_000566422.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=CCO34_RS07430;product=low-specificity L-threonine aldolase;protein_id=WP_000566422.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 660387 662105 . - . ID=gene-CCO34_RS07435;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=CCO34_RS07435;old_locus_tag=CCO34_07430 NZ_NPMD01000002.1 Protein Homology CDS 660387 662105 . - 0 ID=cds-WP_000815309.1;Parent=gene-CCO34_RS07435;Dbxref=GenBank:WP_000815309.1;Name=WP_000815309.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=CCO34_RS07435;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815309.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 662263 663231 . - . ID=gene-CCO34_RS07440;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=CCO34_RS07440;old_locus_tag=CCO34_07435 NZ_NPMD01000002.1 Protein Homology CDS 662263 663231 . - 0 ID=cds-WP_023228793.1;Parent=gene-CCO34_RS07440;Dbxref=GenBank:WP_023228793.1;Name=WP_023228793.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=CCO34_RS07440;product=NADH oxidoreductase;protein_id=WP_023228793.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 663243 664895 . - . ID=gene-CCO34_RS07445;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=CCO34_RS07445;old_locus_tag=CCO34_07440 NZ_NPMD01000002.1 Protein Homology CDS 663243 664895 . - 0 ID=cds-WP_000458785.1;Parent=gene-CCO34_RS07445;Dbxref=GenBank:WP_000458785.1;Name=WP_000458785.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=CCO34_RS07445;product=hydroxylamine reductase;protein_id=WP_000458785.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 665039 665938 . - . ID=gene-CCO34_RS07450;Name=CCO34_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07450;old_locus_tag=CCO34_07445 NZ_NPMD01000002.1 Protein Homology CDS 665039 665938 . - 0 ID=cds-WP_000491124.1;Parent=gene-CCO34_RS07450;Dbxref=GenBank:WP_000491124.1;Name=WP_000491124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=CCO34_RS07450;product=lysine exporter LysO family protein;protein_id=WP_000491124.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 666139 667797 . + . ID=gene-CCO34_RS07460;Name=CCO34_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07460;old_locus_tag=CCO34_07455 NZ_NPMD01000002.1 Protein Homology CDS 666139 667797 . + 0 ID=cds-WP_000599770.1;Parent=gene-CCO34_RS07460;Dbxref=GenBank:WP_000599770.1;Name=WP_000599770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=CCO34_RS07460;product=ATP-dependent endonuclease;protein_id=WP_000599770.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 667794 668744 . - . ID=gene-CCO34_RS07465;Name=CCO34_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07465;old_locus_tag=CCO34_07460 NZ_NPMD01000002.1 Protein Homology CDS 667794 668744 . - 0 ID=cds-WP_001519667.1;Parent=gene-CCO34_RS07465;Dbxref=GenBank:WP_001519667.1;Name=WP_001519667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=CCO34_RS07465;product=VirK/YbjX family protein;protein_id=WP_001519667.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 668890 670008 . + . ID=gene-CCO34_RS07470;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=CCO34_RS07470;old_locus_tag=CCO34_07465 NZ_NPMD01000002.1 Protein Homology CDS 668890 670008 . + 0 ID=cds-WP_001201751.1;Parent=gene-CCO34_RS07470;Dbxref=GenBank:WP_001201751.1;Name=WP_001201751.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=CCO34_RS07470;product=macrolide transporter subunit MacA;protein_id=WP_001201751.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 670005 671951 . + . ID=gene-CCO34_RS07475;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=CCO34_RS07475;old_locus_tag=CCO34_07470 NZ_NPMD01000002.1 Protein Homology CDS 670005 671951 . + 0 ID=cds-WP_000125871.1;Parent=gene-CCO34_RS07475;Dbxref=GenBank:WP_000125871.1;Name=WP_000125871.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=CCO34_RS07475;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000125871.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 672081 672302 . - . ID=gene-CCO34_RS07485;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=CCO34_RS07485;old_locus_tag=CCO34_07480 NZ_NPMD01000002.1 Protein Homology CDS 672081 672302 . - 0 ID=cds-WP_000447499.1;Parent=gene-CCO34_RS07485;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=CCO34_RS07485;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 672453 672530 . + . ID=gene-CCO34_RS25775;Name=CCO34_RS25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25775 NZ_NPMD01000002.1 Protein Homology CDS 672453 672530 . + 0 ID=cds-WP_212742690.1;Parent=gene-CCO34_RS25775;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=CCO34_RS25775;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 672626 672946 . + . ID=gene-CCO34_RS07490;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=CCO34_RS07490;old_locus_tag=CCO34_07485 NZ_NPMD01000002.1 Protein Homology CDS 672626 672946 . + 0 ID=cds-WP_000520789.1;Parent=gene-CCO34_RS07490;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=CCO34_RS07490;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 672977 675253 . + . ID=gene-CCO34_RS07495;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=CCO34_RS07495;old_locus_tag=CCO34_07490 NZ_NPMD01000002.1 Protein Homology CDS 672977 675253 . + 0 ID=cds-WP_000934064.1;Parent=gene-CCO34_RS07495;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=CCO34_RS07495;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 675464 675661 . - . ID=gene-CCO34_RS07500;Name=CCO34_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07500;old_locus_tag=CCO34_07495 NZ_NPMD01000002.1 Protein Homology CDS 675464 675661 . - 0 ID=cds-WP_001117984.1;Parent=gene-CCO34_RS07500;Dbxref=GenBank:WP_001117984.1;Name=WP_001117984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=CCO34_RS07500;product=hypothetical protein;protein_id=WP_001117984.1;transl_table=11 NZ_NPMD01000002.1 RefSeq pseudogene 675823 676176 . - . ID=gene-CCO34_RS07505;Name=CCO34_RS07505;end_range=676176,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS07505;old_locus_tag=CCO34_07500;partial=true;pseudo=true NZ_NPMD01000002.1 Protein Homology CDS 675823 676176 . - 0 ID=cds-CCO34_RS07505;Parent=gene-CCO34_RS07505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=676176,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524896.1;locus_tag=CCO34_RS07505;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 676632 676764 . - . ID=gene-CCO34_RS07515;Name=CCO34_RS07515;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS07515;old_locus_tag=CCO34_07510 NZ_NPMD01000002.1 cmsearch ncRNA 676632 676764 . - . ID=rna-CCO34_RS07515;Parent=gene-CCO34_RS07515;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS07515;product=RtT sRNA NZ_NPMD01000002.1 cmsearch exon 676632 676764 . - . ID=exon-CCO34_RS07515-1;Parent=rna-CCO34_RS07515;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS07515;product=RtT sRNA NZ_NPMD01000002.1 RefSeq gene 676813 676900 . - . ID=gene-CCO34_RS07520;Name=CCO34_RS07520;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS07520;old_locus_tag=CCO34_07515 NZ_NPMD01000002.1 tRNAscan-SE tRNA 676813 676900 . - . ID=rna-CCO34_RS07520;Parent=gene-CCO34_RS07520;anticodon=(pos:complement(676864..676866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS07520;product=tRNA-Ser NZ_NPMD01000002.1 tRNAscan-SE exon 676813 676900 . - . ID=exon-CCO34_RS07520-1;Parent=rna-CCO34_RS07520;anticodon=(pos:complement(676864..676866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS07520;product=tRNA-Ser NZ_NPMD01000002.1 RefSeq gene 677049 677726 . - . ID=gene-CCO34_RS07525;Name=CCO34_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07525;old_locus_tag=CCO34_07520 NZ_NPMD01000002.1 Protein Homology CDS 677049 677726 . - 0 ID=cds-WP_000097897.1;Parent=gene-CCO34_RS07525;Dbxref=GenBank:WP_000097897.1;Name=WP_000097897.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=CCO34_RS07525;product=hydrolase;protein_id=WP_000097897.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 677746 678606 . - . ID=gene-CCO34_RS07530;Name=CCO34_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07530;old_locus_tag=CCO34_07525 NZ_NPMD01000002.1 Protein Homology CDS 677746 678606 . - 0 ID=cds-WP_000809969.1;Parent=gene-CCO34_RS07530;Dbxref=GenBank:WP_000809969.1;Name=WP_000809969.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=CCO34_RS07530;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 678715 679626 . + . ID=gene-CCO34_RS07535;Name=CCO34_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07535;old_locus_tag=CCO34_07530 NZ_NPMD01000002.1 Protein Homology CDS 678715 679626 . + 0 ID=cds-WP_000597928.1;Parent=gene-CCO34_RS07535;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=CCO34_RS07535;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 679717 679935 . - . ID=gene-CCO34_RS07540;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CCO34_RS07540;old_locus_tag=CCO34_07535 NZ_NPMD01000002.1 Protein Homology CDS 679717 679935 . - 0 ID=cds-WP_001040187.1;Parent=gene-CCO34_RS07540;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=CCO34_RS07540;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 680247 680951 . - . ID=gene-CCO34_RS07550;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=CCO34_RS07550;old_locus_tag=CCO34_07545 NZ_NPMD01000002.1 Protein Homology CDS 680247 680951 . - 0 ID=cds-WP_001241649.1;Parent=gene-CCO34_RS07550;Dbxref=GenBank:WP_001241649.1;Name=WP_001241649.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=CCO34_RS07550;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241649.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 680996 682717 . - . ID=gene-CCO34_RS07555;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=CCO34_RS07555;old_locus_tag=CCO34_07550 NZ_NPMD01000002.1 Protein Homology CDS 680996 682717 . - 0 ID=cds-WP_080181064.1;Parent=gene-CCO34_RS07555;Dbxref=GenBank:WP_080181064.1;Name=WP_080181064.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=CCO34_RS07555;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_080181064.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 682718 684484 . - . ID=gene-CCO34_RS07560;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=CCO34_RS07560;old_locus_tag=CCO34_07555 NZ_NPMD01000002.1 Protein Homology CDS 682718 684484 . - 0 ID=cds-WP_001044541.1;Parent=gene-CCO34_RS07560;Dbxref=GenBank:WP_001044541.1;Name=WP_001044541.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=CCO34_RS07560;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044541.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 684598 685566 . - . ID=gene-CCO34_RS07565;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CCO34_RS07565;old_locus_tag=CCO34_07560 NZ_NPMD01000002.1 Protein Homology CDS 684598 685566 . - 0 ID=cds-WP_000537406.1;Parent=gene-CCO34_RS07565;Dbxref=GenBank:WP_000537406.1;Name=WP_000537406.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=CCO34_RS07565;product=thioredoxin-disulfide reductase;protein_id=WP_000537406.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 686113 686607 . + . ID=gene-CCO34_RS07575;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=CCO34_RS07575;old_locus_tag=CCO34_07570 NZ_NPMD01000002.1 Protein Homology CDS 686113 686607 . + 0 ID=cds-WP_000228469.1;Parent=gene-CCO34_RS07575;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=CCO34_RS07575;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_NPMD01000002.1 RefSeq gene 686742 689109 . + . ID=gene-CCO34_RS07580;Name=ftsK;end_range=689109,.;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=CCO34_RS07580;old_locus_tag=CCO34_07575;partial=true NZ_NPMD01000002.1 Protein Homology CDS 686742 689109 . + 0 ID=cds-WP_094965415.1;Parent=gene-CCO34_RS07580;Dbxref=GenBank:WP_094965415.1;Name=WP_094965415.1;Ontology_term=GO:0003677,GO:0005524;end_range=689109,.;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=CCO34_RS07580;partial=true;product=DNA translocase FtsK;protein_id=WP_094965415.1;transl_table=11 ##sequence-region NZ_NPMD01000020.1 1 32629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000020.1 RefSeq region 1 32629 . + . ID=NZ_NPMD01000020.1:1..32629;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000020.1 RefSeq gene 675 2264 . + . ID=gene-CCO34_RS24240;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CCO34_RS24240;old_locus_tag=CCO34_24225 NZ_NPMD01000020.1 Protein Homology CDS 675 2264 . + 0 ID=cds-WP_001187509.1;Parent=gene-CCO34_RS24240;Dbxref=GenBank:WP_001187509.1;Name=WP_001187509.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=CCO34_RS24240;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187509.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 2276 3565 . + . ID=gene-CCO34_RS24245;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CCO34_RS24245;old_locus_tag=CCO34_24230 NZ_NPMD01000020.1 Protein Homology CDS 2276 3565 . + 0 ID=cds-WP_023228161.1;Parent=gene-CCO34_RS24245;Dbxref=GenBank:WP_023228161.1;Name=WP_023228161.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006688384.1;locus_tag=CCO34_RS24245;product=phosphoribosylamine--glycine ligase;protein_id=WP_023228161.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 3562 4887 . - . ID=gene-CCO34_RS24250;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=CCO34_RS24250;old_locus_tag=CCO34_24235 NZ_NPMD01000020.1 Protein Homology CDS 3562 4887 . - 0 ID=cds-WP_080181048.1;Parent=gene-CCO34_RS24250;Dbxref=GenBank:WP_080181048.1;Name=WP_080181048.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=CCO34_RS24250;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_080181048.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 4893 6290 . - . ID=gene-CCO34_RS24255;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=CCO34_RS24255;old_locus_tag=CCO34_24240 NZ_NPMD01000020.1 Protein Homology CDS 4893 6290 . - 0 ID=cds-WP_001536099.1;Parent=gene-CCO34_RS24255;Dbxref=GenBank:WP_001536099.1;Name=WP_001536099.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=CCO34_RS24255;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001536099.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 6544 6999 . + . ID=gene-CCO34_RS24260;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=CCO34_RS24260;old_locus_tag=CCO34_24245 NZ_NPMD01000020.1 Protein Homology CDS 6544 6999 . + 0 ID=cds-WP_000828128.1;Parent=gene-CCO34_RS24260;Dbxref=GenBank:WP_000828128.1;Name=WP_000828128.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=CCO34_RS24260;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828128.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 7041 7733 . - . ID=gene-CCO34_RS24265;Name=CCO34_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24265;old_locus_tag=CCO34_24250 NZ_NPMD01000020.1 Protein Homology CDS 7041 7733 . - 0 ID=cds-WP_001083931.1;Parent=gene-CCO34_RS24265;Dbxref=GenBank:WP_001083931.1;Name=WP_001083931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=CCO34_RS24265;product=DUF1481 domain-containing protein;protein_id=WP_001083931.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 7745 8017 . - . ID=gene-CCO34_RS24270;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=CCO34_RS24270;old_locus_tag=CCO34_24255 NZ_NPMD01000020.1 Protein Homology CDS 7745 8017 . - 0 ID=cds-WP_001044509.1;Parent=gene-CCO34_RS24270;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=CCO34_RS24270;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 8204 8794 . - . ID=gene-CCO34_RS24275;Name=CCO34_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24275;old_locus_tag=CCO34_24260 NZ_NPMD01000020.1 Protein Homology CDS 8204 8794 . - 0 ID=cds-WP_000940092.1;Parent=gene-CCO34_RS24275;Dbxref=GenBank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=CCO34_RS24275;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 8836 9507 . - . ID=gene-CCO34_RS24280;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=CCO34_RS24280;old_locus_tag=CCO34_24265 NZ_NPMD01000020.1 Protein Homology CDS 8836 9507 . - 0 ID=cds-WP_000362359.1;Parent=gene-CCO34_RS24280;Dbxref=GenBank:WP_000362359.1;Name=WP_000362359.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=CCO34_RS24280;product=deoxyribonuclease V;protein_id=WP_000362359.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 9517 10581 . - . ID=gene-CCO34_RS24285;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CCO34_RS24285;old_locus_tag=CCO34_24270 NZ_NPMD01000020.1 Protein Homology CDS 9517 10581 . - 0 ID=cds-WP_000137619.1;Parent=gene-CCO34_RS24285;Dbxref=GenBank:WP_000137619.1;Name=WP_000137619.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=CCO34_RS24285;product=uroporphyrinogen decarboxylase;protein_id=WP_000137619.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 10622 11395 . - . ID=gene-CCO34_RS24290;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=CCO34_RS24290;old_locus_tag=CCO34_24275 NZ_NPMD01000020.1 Protein Homology CDS 10622 11395 . - 0 ID=cds-WP_000373960.1;Parent=gene-CCO34_RS24290;Dbxref=GenBank:WP_000373960.1;Name=WP_000373960.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=CCO34_RS24290;product=NAD(+) diphosphatase;protein_id=WP_000373960.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 11488 11976 . + . ID=gene-CCO34_RS24295;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=CCO34_RS24295;old_locus_tag=CCO34_24280 NZ_NPMD01000020.1 Protein Homology CDS 11488 11976 . + 0 ID=cds-WP_000934315.1;Parent=gene-CCO34_RS24295;Dbxref=GenBank:WP_000934315.1;Name=WP_000934315.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=CCO34_RS24295;product=sigma D regulator;protein_id=WP_000934315.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 12340 14235 . + . ID=gene-CCO34_RS24300;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CCO34_RS24300;old_locus_tag=CCO34_24285 NZ_NPMD01000020.1 Protein Homology CDS 12340 14235 . + 0 ID=cds-WP_000108423.1;Parent=gene-CCO34_RS24300;Dbxref=GenBank:WP_000108423.1;Name=WP_000108423.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=CCO34_RS24300;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_000108423.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 14235 14870 . + . ID=gene-CCO34_RS24305;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CCO34_RS24305;old_locus_tag=CCO34_24290 NZ_NPMD01000020.1 Protein Homology CDS 14235 14870 . + 0 ID=cds-WP_000284636.1;Parent=gene-CCO34_RS24305;Dbxref=GenBank:WP_000284636.1;Name=WP_000284636.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=CCO34_RS24305;product=thiamine phosphate synthase;protein_id=WP_000284636.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 14863 15621 . + . ID=gene-CCO34_RS24310;Name=CCO34_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24310;old_locus_tag=CCO34_24295 NZ_NPMD01000020.1 Protein Homology CDS 14863 15621 . + 0 ID=cds-WP_000999772.1;Parent=gene-CCO34_RS24310;Dbxref=GenBank:WP_000999772.1;Name=WP_000999772.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=CCO34_RS24310;product=HesA/MoeB/ThiF family protein;protein_id=WP_000999772.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 15602 15802 . + . ID=gene-CCO34_RS24315;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CCO34_RS24315;old_locus_tag=CCO34_24300 NZ_NPMD01000020.1 Protein Homology CDS 15602 15802 . + 0 ID=cds-WP_001166847.1;Parent=gene-CCO34_RS24315;Dbxref=GenBank:WP_001166847.1;Name=WP_001166847.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=CCO34_RS24315;product=sulfur carrier protein ThiS;protein_id=WP_001166847.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 15804 16574 . + . ID=gene-CCO34_RS24320;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=CCO34_RS24320;old_locus_tag=CCO34_24305 NZ_NPMD01000020.1 Protein Homology CDS 15804 16574 . + 0 ID=cds-WP_000944075.1;Parent=gene-CCO34_RS24320;Dbxref=GenBank:WP_000944075.1;Name=WP_000944075.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=CCO34_RS24320;product=thiazole synthase;protein_id=WP_000944075.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 16571 17704 . + . ID=gene-CCO34_RS24325;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=CCO34_RS24325;old_locus_tag=CCO34_24310 NZ_NPMD01000020.1 Protein Homology CDS 16571 17704 . + 0 ID=cds-WP_000847490.1;Parent=gene-CCO34_RS24325;Dbxref=GenBank:WP_000847490.1;Name=WP_000847490.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=CCO34_RS24325;product=2-iminoacetate synthase ThiH;protein_id=WP_000847490.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 17925 18953 . - . ID=gene-CCO34_RS24330;Name=CCO34_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24330;old_locus_tag=CCO34_24315 NZ_NPMD01000020.1 Protein Homology CDS 17925 18953 . - 0 ID=cds-WP_000400602.1;Parent=gene-CCO34_RS24330;Dbxref=GenBank:WP_000400602.1;Name=WP_000400602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=CCO34_RS24330;product=type III secretion system effector arginine glycosyltransferase SseK1;protein_id=WP_000400602.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 19357 19677 . + . ID=gene-CCO34_RS24340;Name=CCO34_RS24340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24340;old_locus_tag=CCO34_24325 NZ_NPMD01000020.1 Protein Homology CDS 19357 19677 . + 0 ID=cds-WP_023209527.1;Parent=gene-CCO34_RS24340;Dbxref=GenBank:WP_023209527.1;Name=WP_023209527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001654076.1;locus_tag=CCO34_RS24340;product=hypothetical protein;protein_id=WP_023209527.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 19679 19960 . - . ID=gene-CCO34_RS24345;Name=CCO34_RS24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24345;old_locus_tag=CCO34_24330 NZ_NPMD01000020.1 Protein Homology CDS 19679 19960 . - 0 ID=cds-WP_001110919.1;Parent=gene-CCO34_RS24345;Dbxref=GenBank:WP_001110919.1;Name=WP_001110919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001110920.1;locus_tag=CCO34_RS24345;product=hypothetical protein;protein_id=WP_001110919.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 20047 24270 . - . ID=gene-CCO34_RS24350;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CCO34_RS24350;old_locus_tag=CCO34_24335 NZ_NPMD01000020.1 Protein Homology CDS 20047 24270 . - 0 ID=cds-WP_000653965.1;Parent=gene-CCO34_RS24350;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=CCO34_RS24350;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 24347 28375 . - . ID=gene-CCO34_RS24355;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CCO34_RS24355;old_locus_tag=CCO34_24340 NZ_NPMD01000020.1 Protein Homology CDS 24347 28375 . - 0 ID=cds-WP_000263105.1;Parent=gene-CCO34_RS24355;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=CCO34_RS24355;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 28693 29058 . - . ID=gene-CCO34_RS24360;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CCO34_RS24360;old_locus_tag=CCO34_24345 NZ_NPMD01000020.1 Protein Homology CDS 28693 29058 . - 0 ID=cds-WP_000028882.1;Parent=gene-CCO34_RS24360;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=CCO34_RS24360;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 29125 29622 . - . ID=gene-CCO34_RS24365;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CCO34_RS24365;old_locus_tag=CCO34_24350 NZ_NPMD01000020.1 Protein Homology CDS 29125 29622 . - 0 ID=cds-WP_001207203.1;Parent=gene-CCO34_RS24365;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=CCO34_RS24365;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 30042 30746 . - . ID=gene-CCO34_RS24375;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CCO34_RS24375;old_locus_tag=CCO34_24360 NZ_NPMD01000020.1 Protein Homology CDS 30042 30746 . - 0 ID=cds-WP_001096676.1;Parent=gene-CCO34_RS24375;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=CCO34_RS24375;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 30750 31178 . - . ID=gene-CCO34_RS24380;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CCO34_RS24380;old_locus_tag=CCO34_24365 NZ_NPMD01000020.1 Protein Homology CDS 30750 31178 . - 0 ID=cds-WP_001085926.1;Parent=gene-CCO34_RS24380;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=CCO34_RS24380;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 31336 31881 . - . ID=gene-CCO34_RS24385;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CCO34_RS24385;old_locus_tag=CCO34_24370 NZ_NPMD01000020.1 Protein Homology CDS 31336 31881 . - 0 ID=cds-WP_001287521.1;Parent=gene-CCO34_RS24385;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=CCO34_RS24385;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_NPMD01000020.1 RefSeq gene 31883 32266 . - . ID=gene-CCO34_RS24390;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CCO34_RS24390;old_locus_tag=CCO34_24375 NZ_NPMD01000020.1 Protein Homology CDS 31883 32266 . - 0 ID=cds-WP_001275691.1;Parent=gene-CCO34_RS24390;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=CCO34_RS24390;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11 NZ_NPMD01000020.1 RefSeq pseudogene 32496 32629 . - . ID=gene-CCO34_RS24395;Name=tuf;end_range=32629,.;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO34_RS24395;old_locus_tag=CCO34_24380;partial=true;pseudo=true NZ_NPMD01000020.1 Protein Homology CDS 32496 32629 . - 2 ID=cds-CCO34_RS24395;Parent=gene-CCO34_RS24395;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=32629,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO34_RS24395;partial=true;product=elongation factor Tu;pseudo=true;transl_table=11 ##sequence-region NZ_NPMD01000021.1 1 26474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000021.1 RefSeq region 1 26474 . + . ID=NZ_NPMD01000021.1:1..26474;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000021.1 RefSeq gene 256 408 . - . ID=gene-CCO34_RS25635;Name=CCO34_RS25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25635 NZ_NPMD01000021.1 GeneMarkS-2+ CDS 256 408 . - 0 ID=cds-WP_000795900.1;Parent=gene-CCO34_RS25635;Dbxref=GenBank:WP_000795900.1;Name=WP_000795900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25635;product=hypothetical protein;protein_id=WP_000795900.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 522 1076 . + . ID=gene-CCO34_RS24410;Name=CCO34_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24410;old_locus_tag=CCO34_24395 NZ_NPMD01000021.1 Protein Homology CDS 522 1076 . + 0 ID=cds-WP_001285631.1;Parent=gene-CCO34_RS24410;Dbxref=GenBank:WP_001285631.1;Name=WP_001285631.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=CCO34_RS24410;product=gamma carbonic anhydrase family protein;protein_id=WP_001285631.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 1052 1309 . - . ID=gene-CCO34_RS24415;Name=CCO34_RS24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24415;old_locus_tag=CCO34_24400 NZ_NPMD01000021.1 Protein Homology CDS 1052 1309 . - 0 ID=cds-WP_001070571.1;Parent=gene-CCO34_RS24415;Dbxref=GenBank:WP_001070571.1;Name=WP_001070571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=CCO34_RS24415;product=DUF1488 domain-containing protein;protein_id=WP_001070571.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 1306 2124 . - . ID=gene-CCO34_RS24420;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CCO34_RS24420;old_locus_tag=CCO34_24405 NZ_NPMD01000021.1 Protein Homology CDS 1306 2124 . - 0 ID=cds-WP_000451194.1;Parent=gene-CCO34_RS24420;Dbxref=GenBank:WP_000451194.1;Name=WP_000451194.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=CCO34_RS24420;product=shikimate dehydrogenase;protein_id=WP_000451194.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 2129 2701 . - . ID=gene-CCO34_RS24425;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=CCO34_RS24425;old_locus_tag=CCO34_24410 NZ_NPMD01000021.1 Protein Homology CDS 2129 2701 . - 0 ID=cds-WP_001063613.1;Parent=gene-CCO34_RS24425;Dbxref=GenBank:WP_001063613.1;Name=WP_001063613.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=CCO34_RS24425;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063613.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 2706 3248 . - . ID=gene-CCO34_RS24430;Name=CCO34_RS24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24430;old_locus_tag=CCO34_24415 NZ_NPMD01000021.1 Protein Homology CDS 2706 3248 . - 0 ID=cds-WP_001129708.1;Parent=gene-CCO34_RS24430;Dbxref=GenBank:WP_001129708.1;Name=WP_001129708.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=CCO34_RS24430;product=DNA topoisomerase family protein;protein_id=WP_001129708.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 3275 3748 . - . ID=gene-CCO34_RS24435;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=CCO34_RS24435;old_locus_tag=CCO34_24420 NZ_NPMD01000021.1 Protein Homology CDS 3275 3748 . - 0 ID=cds-WP_000460663.1;Parent=gene-CCO34_RS24435;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=CCO34_RS24435;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 3720 4844 . - . ID=gene-CCO34_RS24440;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CCO34_RS24440;old_locus_tag=CCO34_24425 NZ_NPMD01000021.1 Protein Homology CDS 3720 4844 . - 0 ID=cds-WP_000124526.1;Parent=gene-CCO34_RS24440;Dbxref=GenBank:WP_000124526.1;Name=WP_000124526.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=CCO34_RS24440;product=DNA-protecting protein DprA;protein_id=WP_000124526.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 4976 5485 . + . ID=gene-CCO34_RS24445;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CCO34_RS24445;old_locus_tag=CCO34_24430 NZ_NPMD01000021.1 Protein Homology CDS 4976 5485 . + 0 ID=cds-WP_000114987.1;Parent=gene-CCO34_RS24445;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=CCO34_RS24445;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 5501 6448 . + . ID=gene-CCO34_RS24450;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CCO34_RS24450;old_locus_tag=CCO34_24435 NZ_NPMD01000021.1 Protein Homology CDS 5501 6448 . + 0 ID=cds-WP_001285169.1;Parent=gene-CCO34_RS24450;Dbxref=GenBank:WP_001285169.1;Name=WP_001285169.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=CCO34_RS24450;product=methionyl-tRNA formyltransferase;protein_id=WP_001285169.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 6500 7789 . + . ID=gene-CCO34_RS24455;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CCO34_RS24455;old_locus_tag=CCO34_24440 NZ_NPMD01000021.1 Protein Homology CDS 6500 7789 . + 0 ID=cds-WP_000744608.1;Parent=gene-CCO34_RS24455;Dbxref=GenBank:WP_000744608.1;Name=WP_000744608.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=CCO34_RS24455;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_000744608.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 7811 9187 . + . ID=gene-CCO34_RS24460;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=CCO34_RS24460;old_locus_tag=CCO34_24445 NZ_NPMD01000021.1 Protein Homology CDS 7811 9187 . + 0 ID=cds-WP_000691374.1;Parent=gene-CCO34_RS24460;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=CCO34_RS24460;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 9328 9741 . + . ID=gene-CCO34_RS24465;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CCO34_RS24465;old_locus_tag=CCO34_24450 NZ_NPMD01000021.1 Protein Homology CDS 9328 9741 . + 0 ID=cds-WP_000008119.1;Parent=gene-CCO34_RS24465;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=CCO34_RS24465;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11 NZ_NPMD01000021.1 RefSeq pseudogene 9743 9946 . - . ID=gene-CCO34_RS24470;Name=CCO34_RS24470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS24470;old_locus_tag=CCO34_24455;partial=true;pseudo=true;start_range=.,9743 NZ_NPMD01000021.1 Protein Homology CDS 9743 9946 . - 0 ID=cds-CCO34_RS24470;Parent=gene-CCO34_RS24470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=CCO34_RS24470;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;start_range=.,9743;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 10004 10429 . - . ID=gene-CCO34_RS24475;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=CCO34_RS24475;old_locus_tag=CCO34_24460 NZ_NPMD01000021.1 Protein Homology CDS 10004 10429 . - 0 ID=cds-WP_000285585.1;Parent=gene-CCO34_RS24475;Dbxref=GenBank:WP_000285585.1;Name=WP_000285585.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=CCO34_RS24475;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285585.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 10440 10808 . - . ID=gene-CCO34_RS24480;Name=CCO34_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24480;old_locus_tag=CCO34_24465 NZ_NPMD01000021.1 Protein Homology CDS 10440 10808 . - 0 ID=cds-WP_000266515.1;Parent=gene-CCO34_RS24480;Dbxref=GenBank:WP_000266515.1;Name=WP_000266515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=CCO34_RS24480;product=DUF1992 domain-containing protein;protein_id=WP_000266515.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 10916 11299 . - . ID=gene-CCO34_RS24485;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CCO34_RS24485;old_locus_tag=CCO34_24470 NZ_NPMD01000021.1 Protein Homology CDS 10916 11299 . - 0 ID=cds-WP_001216370.1;Parent=gene-CCO34_RS24485;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=CCO34_RS24485;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 11340 12329 . - . ID=gene-CCO34_RS24490;Name=CCO34_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24490;old_locus_tag=CCO34_24475 NZ_NPMD01000021.1 Protein Homology CDS 11340 12329 . - 0 ID=cds-WP_001162094.1;Parent=gene-CCO34_RS24490;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=CCO34_RS24490;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 12355 12975 . - . ID=gene-CCO34_RS24495;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CCO34_RS24495;old_locus_tag=CCO34_24480 NZ_NPMD01000021.1 Protein Homology CDS 12355 12975 . - 0 ID=cds-WP_000135226.1;Parent=gene-CCO34_RS24495;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=CCO34_RS24495;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 13009 13398 . - . ID=gene-CCO34_RS24500;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CCO34_RS24500;old_locus_tag=CCO34_24485 NZ_NPMD01000021.1 Protein Homology CDS 13009 13398 . - 0 ID=cds-WP_001029758.1;Parent=gene-CCO34_RS24500;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=CCO34_RS24500;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 13415 13771 . - . ID=gene-CCO34_RS24505;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CCO34_RS24505;old_locus_tag=CCO34_24490 NZ_NPMD01000021.1 Protein Homology CDS 13415 13771 . - 0 ID=cds-WP_000090780.1;Parent=gene-CCO34_RS24505;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=CCO34_RS24505;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 13918 14034 . - . ID=gene-CCO34_RS24510;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CCO34_RS24510;old_locus_tag=CCO34_24495 NZ_NPMD01000021.1 Protein Homology CDS 13918 14034 . - 0 ID=cds-WP_000868187.1;Parent=gene-CCO34_RS24510;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=CCO34_RS24510;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 14066 15397 . - . ID=gene-CCO34_RS24515;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CCO34_RS24515;old_locus_tag=CCO34_24500 NZ_NPMD01000021.1 Protein Homology CDS 14066 15397 . - 0 ID=cds-WP_001118864.1;Parent=gene-CCO34_RS24515;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=CCO34_RS24515;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 15405 15839 . - . ID=gene-CCO34_RS24520;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CCO34_RS24520;old_locus_tag=CCO34_24505 NZ_NPMD01000021.1 Protein Homology CDS 15405 15839 . - 0 ID=cds-WP_001238917.1;Parent=gene-CCO34_RS24520;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=CCO34_RS24520;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 15843 16022 . - . ID=gene-CCO34_RS24525;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CCO34_RS24525;old_locus_tag=CCO34_24510 NZ_NPMD01000021.1 Protein Homology CDS 15843 16022 . - 0 ID=cds-WP_001140434.1;Parent=gene-CCO34_RS24525;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=CCO34_RS24525;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 16026 16529 . - . ID=gene-CCO34_RS24530;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CCO34_RS24530;old_locus_tag=CCO34_24515 NZ_NPMD01000021.1 Protein Homology CDS 16026 16529 . - 0 ID=cds-WP_000940121.1;Parent=gene-CCO34_RS24530;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=CCO34_RS24530;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 16544 16897 . - . ID=gene-CCO34_RS24535;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CCO34_RS24535;old_locus_tag=CCO34_24520 NZ_NPMD01000021.1 Protein Homology CDS 16544 16897 . - 0 ID=cds-WP_000358956.1;Parent=gene-CCO34_RS24535;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=CCO34_RS24535;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 16907 17440 . - . ID=gene-CCO34_RS24540;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CCO34_RS24540;old_locus_tag=CCO34_24525 NZ_NPMD01000021.1 Protein Homology CDS 16907 17440 . - 0 ID=cds-WP_000091939.1;Parent=gene-CCO34_RS24540;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=CCO34_RS24540;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 17453 17845 . - . ID=gene-CCO34_RS24545;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CCO34_RS24545;old_locus_tag=CCO34_24530 NZ_NPMD01000021.1 Protein Homology CDS 17453 17845 . - 0 ID=cds-WP_000062611.1;Parent=gene-CCO34_RS24545;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=CCO34_RS24545;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 17879 18184 . - . ID=gene-CCO34_RS24550;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CCO34_RS24550;old_locus_tag=CCO34_24535 NZ_NPMD01000021.1 Protein Homology CDS 17879 18184 . - 0 ID=cds-WP_001118932.1;Parent=gene-CCO34_RS24550;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=CCO34_RS24550;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 18199 18738 . - . ID=gene-CCO34_RS24555;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CCO34_RS24555;old_locus_tag=CCO34_24540 NZ_NPMD01000021.1 Protein Homology CDS 18199 18738 . - 0 ID=cds-WP_001096206.1;Parent=gene-CCO34_RS24555;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=CCO34_RS24555;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 18753 19067 . - . ID=gene-CCO34_RS24560;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CCO34_RS24560;old_locus_tag=CCO34_24545 NZ_NPMD01000021.1 Protein Homology CDS 18753 19067 . - 0 ID=cds-WP_000729185.1;Parent=gene-CCO34_RS24560;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=CCO34_RS24560;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 19078 19449 . - . ID=gene-CCO34_RS24565;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CCO34_RS24565;old_locus_tag=CCO34_24550 NZ_NPMD01000021.1 Protein Homology CDS 19078 19449 . - 0 ID=cds-WP_000613954.1;Parent=gene-CCO34_RS24565;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=CCO34_RS24565;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 19613 19867 . - . ID=gene-CCO34_RS24570;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CCO34_RS24570;old_locus_tag=CCO34_24555 NZ_NPMD01000021.1 Protein Homology CDS 19613 19867 . - 0 ID=cds-WP_000130101.1;Parent=gene-CCO34_RS24570;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=CCO34_RS24570;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 19867 20058 . - . ID=gene-CCO34_RS24575;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CCO34_RS24575;old_locus_tag=CCO34_24560 NZ_NPMD01000021.1 Protein Homology CDS 19867 20058 . - 0 ID=cds-WP_000644742.1;Parent=gene-CCO34_RS24575;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=CCO34_RS24575;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 20058 20468 . - . ID=gene-CCO34_RS24580;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CCO34_RS24580;old_locus_tag=CCO34_24565 NZ_NPMD01000021.1 Protein Homology CDS 20058 20468 . - 0 ID=cds-WP_000941208.1;Parent=gene-CCO34_RS24580;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=CCO34_RS24580;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 20481 21182 . - . ID=gene-CCO34_RS24585;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CCO34_RS24585;old_locus_tag=CCO34_24570 NZ_NPMD01000021.1 Protein Homology CDS 20481 21182 . - 0 ID=cds-WP_000529945.1;Parent=gene-CCO34_RS24585;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=CCO34_RS24585;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 21200 21532 . - . ID=gene-CCO34_RS24590;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CCO34_RS24590;old_locus_tag=CCO34_24575 NZ_NPMD01000021.1 Protein Homology CDS 21200 21532 . - 0 ID=cds-WP_000447529.1;Parent=gene-CCO34_RS24590;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=CCO34_RS24590;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 21547 21825 . - . ID=gene-CCO34_RS24595;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CCO34_RS24595;old_locus_tag=CCO34_24580 NZ_NPMD01000021.1 Protein Homology CDS 21547 21825 . - 0 ID=cds-WP_001138115.1;Parent=gene-CCO34_RS24595;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=CCO34_RS24595;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 21842 22663 . - . ID=gene-CCO34_RS24600;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CCO34_RS24600;old_locus_tag=CCO34_24585 NZ_NPMD01000021.1 Protein Homology CDS 21842 22663 . - 0 ID=cds-WP_000301869.1;Parent=gene-CCO34_RS24600;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=CCO34_RS24600;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 22681 22983 . - . ID=gene-CCO34_RS24605;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CCO34_RS24605;old_locus_tag=CCO34_24590 NZ_NPMD01000021.1 Protein Homology CDS 22681 22983 . - 0 ID=cds-WP_000617546.1;Parent=gene-CCO34_RS24605;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=CCO34_RS24605;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 22980 23585 . - . ID=gene-CCO34_RS24610;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CCO34_RS24610;old_locus_tag=CCO34_24595 NZ_NPMD01000021.1 Protein Homology CDS 22980 23585 . - 0 ID=cds-WP_000424395.1;Parent=gene-CCO34_RS24610;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=CCO34_RS24610;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 23596 24225 . - . ID=gene-CCO34_RS24615;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CCO34_RS24615;old_locus_tag=CCO34_24600 NZ_NPMD01000021.1 Protein Homology CDS 23596 24225 . - 0 ID=cds-WP_000579838.1;Parent=gene-CCO34_RS24615;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=CCO34_RS24615;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 24258 24569 . - . ID=gene-CCO34_RS24620;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CCO34_RS24620;old_locus_tag=CCO34_24605 NZ_NPMD01000021.1 Protein Homology CDS 24258 24569 . - 0 ID=cds-WP_001181005.1;Parent=gene-CCO34_RS24620;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=CCO34_RS24620;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 24949 25416 . + . ID=gene-CCO34_RS24630;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=CCO34_RS24630;old_locus_tag=CCO34_24615 NZ_NPMD01000021.1 Protein Homology CDS 24949 25416 . + 0 ID=cds-WP_000495848.1;Parent=gene-CCO34_RS24630;Dbxref=GenBank:WP_000495848.1;Name=WP_000495848.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=CCO34_RS24630;product=prepilin peptidase;protein_id=WP_000495848.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 25413 25889 . - . ID=gene-CCO34_RS24635;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=CCO34_RS24635;old_locus_tag=CCO34_24620 NZ_NPMD01000021.1 Protein Homology CDS 25413 25889 . - 0 ID=cds-WP_000675530.1;Parent=gene-CCO34_RS24635;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=CCO34_RS24635;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11 NZ_NPMD01000021.1 RefSeq gene 25962 26156 . - . ID=gene-CCO34_RS24640;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=CCO34_RS24640;old_locus_tag=CCO34_24625 NZ_NPMD01000021.1 Protein Homology CDS 25962 26156 . - 0 ID=cds-WP_000289082.1;Parent=gene-CCO34_RS24640;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=CCO34_RS24640;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11 NZ_NPMD01000021.1 RefSeq pseudogene 26341 26474 . - . ID=gene-CCO34_RS24655;Name=tuf;end_range=26474,.;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO34_RS24655;old_locus_tag=CCO34_24640;partial=true;pseudo=true NZ_NPMD01000021.1 Protein Homology CDS 26341 26474 . - 2 ID=cds-CCO34_RS24655;Parent=gene-CCO34_RS24655;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=26474,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO34_RS24655;partial=true;product=elongation factor Tu;pseudo=true;transl_table=11 ##sequence-region NZ_NPMD01000022.1 1 24054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000022.1 RefSeq region 1 24054 . + . ID=NZ_NPMD01000022.1:1..24054;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000022.1 RefSeq gene 46 1467 . - . ID=gene-CCO34_RS24660;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=CCO34_RS24660;old_locus_tag=CCO34_24645 NZ_NPMD01000022.1 Protein Homology CDS 46 1467 . - 0 ID=cds-WP_094965675.1;Parent=gene-CCO34_RS24660;Dbxref=GenBank:WP_094965675.1;Name=WP_094965675.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490567.1;locus_tag=CCO34_RS24660;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_094965675.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 1467 2207 . - . ID=gene-CCO34_RS24665;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=CCO34_RS24665;old_locus_tag=CCO34_24650 NZ_NPMD01000022.1 Protein Homology CDS 1467 2207 . - 0 ID=cds-WP_094965676.1;Parent=gene-CCO34_RS24665;Dbxref=GenBank:WP_094965676.1;Name=WP_094965676.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490566.1;locus_tag=CCO34_RS24665;product=type-F conjugative transfer system secretin TraK;protein_id=WP_094965676.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 2194 2760 . - . ID=gene-CCO34_RS24670;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=CCO34_RS24670;old_locus_tag=CCO34_24655 NZ_NPMD01000022.1 Protein Homology CDS 2194 2760 . - 0 ID=cds-WP_021003395.1;Parent=gene-CCO34_RS24670;Dbxref=GenBank:WP_021003395.1;Name=WP_021003395.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=CCO34_RS24670;product=type IV conjugative transfer system protein TraE;protein_id=WP_021003395.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 2782 3093 . - . ID=gene-CCO34_RS24675;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=CCO34_RS24675;old_locus_tag=CCO34_24660 NZ_NPMD01000022.1 Protein Homology CDS 2782 3093 . - 0 ID=cds-WP_094965677.1;Parent=gene-CCO34_RS24675;Dbxref=GenBank:WP_094965677.1;Name=WP_094965677.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=CCO34_RS24675;product=type IV conjugative transfer system protein TraL;protein_id=WP_094965677.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 3108 3470 . - . ID=gene-CCO34_RS24680;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=CCO34_RS24680;old_locus_tag=CCO34_24665 NZ_NPMD01000022.1 Protein Homology CDS 3108 3470 . - 0 ID=cds-WP_094965678.1;Parent=gene-CCO34_RS24680;Dbxref=GenBank:WP_094965678.1;Name=WP_094965678.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490563.1;locus_tag=CCO34_RS24680;product=type IV conjugative transfer system pilin TraA;protein_id=WP_094965678.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 3512 3739 . - . ID=gene-CCO34_RS24685;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=CCO34_RS24685;old_locus_tag=CCO34_24670 NZ_NPMD01000022.1 Protein Homology CDS 3512 3739 . - 0 ID=cds-WP_094965679.1;Parent=gene-CCO34_RS24685;Dbxref=GenBank:WP_094965679.1;Name=WP_094965679.1;gbkey=CDS;gene=traY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000589556.1;locus_tag=CCO34_RS24685;product=conjugal transfer relaxosome protein TraY;protein_id=WP_094965679.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 3876 4553 . - . ID=gene-CCO34_RS25640;Name=CCO34_RS25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25640 NZ_NPMD01000022.1 Protein Homology CDS 3876 4553 . - 0 ID=cds-WP_176452917.1;Parent=gene-CCO34_RS25640;Dbxref=GenBank:WP_176452917.1;Name=WP_176452917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001687056.1;locus_tag=CCO34_RS25640;product=conjugal transfer protein TrbJ;protein_id=WP_176452917.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 4747 5127 . - . ID=gene-CCO34_RS24695;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=CCO34_RS24695;old_locus_tag=CCO34_24680 NZ_NPMD01000022.1 Protein Homology CDS 4747 5127 . - 0 ID=cds-WP_001151546.1;Parent=gene-CCO34_RS24695;Dbxref=GenBank:WP_001151546.1;Name=WP_001151546.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490560.1;locus_tag=CCO34_RS24695;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_001151546.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 5542 6012 . + . ID=gene-CCO34_RS24705;Name=mltE;gbkey=Gene;gene=mltE;gene_biotype=protein_coding;locus_tag=CCO34_RS24705;old_locus_tag=CCO34_24690 NZ_NPMD01000022.1 Protein Homology CDS 5542 6012 . + 0 ID=cds-WP_042828200.1;Parent=gene-CCO34_RS24705;Dbxref=GenBank:WP_042828200.1;Name=WP_042828200.1;gbkey=CDS;gene=mltE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490559.1;locus_tag=CCO34_RS24705;product=transglycosylase SLT domain-containing protein MltE;protein_id=WP_042828200.1;transl_table=11 NZ_NPMD01000022.1 RefSeq pseudogene 6323 7142 . - . ID=gene-CCO34_RS25480;Name=CCO34_RS25480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25480;pseudo=true NZ_NPMD01000022.1 Protein Homology CDS 6323 7142 . - 0 ID=cds-CCO34_RS25480;Parent=gene-CCO34_RS25480;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=CCO34_RS25480;product=DUF932 domain-containing protein;pseudo=true;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 7245 7403 . - . ID=gene-CCO34_RS25645;Name=CCO34_RS25645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25645 NZ_NPMD01000022.1 Protein Homology CDS 7245 7403 . - 0 ID=cds-WP_176452916.1;Parent=gene-CCO34_RS25645;Dbxref=GenBank:WP_176452916.1;Name=WP_176452916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001704449.1;locus_tag=CCO34_RS25645;product=hypothetical protein;protein_id=WP_176452916.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 7652 8389 . - . ID=gene-CCO34_RS24720;Name=CCO34_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24720;old_locus_tag=CCO34_24705 NZ_NPMD01000022.1 Protein Homology CDS 7652 8389 . - 0 ID=cds-WP_079967501.1;Parent=gene-CCO34_RS24720;Dbxref=GenBank:WP_079967501.1;Name=WP_079967501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490558.1;locus_tag=CCO34_RS24720;product=plasmid SOS inhibition protein A;protein_id=WP_079967501.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 8386 8820 . - . ID=gene-CCO34_RS24725;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=CCO34_RS24725;old_locus_tag=CCO34_24710 NZ_NPMD01000022.1 Protein Homology CDS 8386 8820 . - 0 ID=cds-WP_010999943.1;Parent=gene-CCO34_RS24725;Dbxref=GenBank:WP_010999943.1;Name=WP_010999943.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490557.1;locus_tag=CCO34_RS24725;product=conjugation system SOS inhibitor PsiB;protein_id=WP_010999943.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 8860 10857 . - . ID=gene-CCO34_RS24730;Name=CCO34_RS24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24730;old_locus_tag=CCO34_24715 NZ_NPMD01000022.1 Protein Homology CDS 8860 10857 . - 0 ID=cds-WP_094965681.1;Parent=gene-CCO34_RS24730;Dbxref=GenBank:WP_094965681.1;Name=WP_094965681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490556.1;locus_tag=CCO34_RS24730;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_094965681.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 10926 11168 . - . ID=gene-CCO34_RS24735;Name=CCO34_RS24735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24735;old_locus_tag=CCO34_24720 NZ_NPMD01000022.1 Protein Homology CDS 10926 11168 . - 0 ID=cds-WP_000131519.1;Parent=gene-CCO34_RS24735;Dbxref=GenBank:WP_000131519.1;Name=WP_000131519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490555.1;locus_tag=CCO34_RS24735;product=DUF905 domain-containing protein;protein_id=WP_000131519.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 11223 11741 . - . ID=gene-CCO34_RS24740;Name=CCO34_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24740;old_locus_tag=CCO34_24725 NZ_NPMD01000022.1 Protein Homology CDS 11223 11741 . - 0 ID=cds-WP_094965682.1;Parent=gene-CCO34_RS24740;Dbxref=GenBank:WP_094965682.1;Name=WP_094965682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490554.1;locus_tag=CCO34_RS24740;product=single-stranded DNA-binding protein SSB2;protein_id=WP_094965682.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 11950 12300 . - . ID=gene-CCO34_RS26290;Name=CCO34_RS26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26290 NZ_NPMD01000022.1 GeneMarkS-2+ CDS 11950 12300 . - 0 ID=cds-WP_423825527.1;Parent=gene-CCO34_RS26290;Dbxref=GenBank:WP_423825527.1;Name=WP_423825527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS26290;product=hypothetical protein;protein_id=WP_423825527.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 12414 12737 . - . ID=gene-CCO34_RS24755;Name=CCO34_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24755;old_locus_tag=CCO34_24740 NZ_NPMD01000022.1 Protein Homology CDS 12414 12737 . - 0 ID=cds-WP_057394640.1;Parent=gene-CCO34_RS24755;Dbxref=GenBank:WP_057394640.1;Name=WP_057394640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490553.1;locus_tag=CCO34_RS24755;product=DNA polymerase III subunit theta;protein_id=WP_057394640.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 12973 13407 . - . ID=gene-CCO34_RS24760;Name=CCO34_RS24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24760;old_locus_tag=CCO34_24745 NZ_NPMD01000022.1 Protein Homology CDS 12973 13407 . - 0 ID=cds-WP_094965685.1;Parent=gene-CCO34_RS24760;Dbxref=GenBank:WP_094965685.1;Name=WP_094965685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490552.1;locus_tag=CCO34_RS24760;product=DUF1380 family protein;protein_id=WP_094965685.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 13474 13908 . - . ID=gene-CCO34_RS24765;Name=CCO34_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24765;old_locus_tag=CCO34_24750 NZ_NPMD01000022.1 Protein Homology CDS 13474 13908 . - 0 ID=cds-WP_001200150.1;Parent=gene-CCO34_RS24765;Dbxref=GenBank:WP_001200150.1;Name=WP_001200150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490551.1;locus_tag=CCO34_RS24765;product=antirestriction protein;protein_id=WP_001200150.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 14396 15160 . - . ID=gene-CCO34_RS24775;Name=CCO34_RS24775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24775;old_locus_tag=CCO34_24760 NZ_NPMD01000022.1 Protein Homology CDS 14396 15160 . - 0 ID=cds-WP_094965686.1;Parent=gene-CCO34_RS24775;Dbxref=GenBank:WP_094965686.1;Name=WP_094965686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490550.1;locus_tag=CCO34_RS24775;product=hypothetical protein;protein_id=WP_094965686.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 15232 15645 . - . ID=gene-CCO34_RS24780;Name=CCO34_RS24780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24780;old_locus_tag=CCO34_24765 NZ_NPMD01000022.1 Protein Homology CDS 15232 15645 . - 0 ID=cds-WP_000990114.1;Parent=gene-CCO34_RS24780;Dbxref=GenBank:WP_000990114.1;Name=WP_000990114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990115.1;locus_tag=CCO34_RS24780;product=DUF1380 family protein;protein_id=WP_000990114.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 15701 15922 . - . ID=gene-CCO34_RS24785;Name=CCO34_RS24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24785;old_locus_tag=CCO34_24770 NZ_NPMD01000022.1 Protein Homology CDS 15701 15922 . - 0 ID=cds-WP_001109588.1;Parent=gene-CCO34_RS24785;Dbxref=GenBank:WP_001109588.1;Name=WP_001109588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490549.1;locus_tag=CCO34_RS24785;product=hypothetical protein;protein_id=WP_001109588.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 15922 16602 . - . ID=gene-CCO34_RS24790;Name=CCO34_RS24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24790;old_locus_tag=CCO34_24775 NZ_NPMD01000022.1 Protein Homology CDS 15922 16602 . - 0 ID=cds-WP_000088645.1;Parent=gene-CCO34_RS24790;Dbxref=GenBank:WP_000088645.1;Name=WP_000088645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490548.1;locus_tag=CCO34_RS24790;product=DNA methylase;protein_id=WP_000088645.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 16765 17046 . + . ID=gene-CCO34_RS25990;Name=CCO34_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25990 NZ_NPMD01000022.1 Protein Homology CDS 16765 17046 . + 0 ID=cds-WP_146671468.1;Parent=gene-CCO34_RS25990;Dbxref=GenBank:WP_146671468.1;Name=WP_146671468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134757.1;locus_tag=CCO34_RS25990;product=hypothetical protein;protein_id=WP_146671468.1;transl_table=11 NZ_NPMD01000022.1 RefSeq pseudogene 16984 17285 . - . ID=gene-CCO34_RS24800;Name=CCO34_RS24800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS24800;old_locus_tag=CCO34_24785;pseudo=true NZ_NPMD01000022.1 Protein Homology CDS 16984 17285 . - 0 ID=cds-CCO34_RS24800;Parent=gene-CCO34_RS24800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490547.1;locus_tag=CCO34_RS24800;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 17278 17748 . - . ID=gene-CCO34_RS24805;Name=CCO34_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24805;old_locus_tag=CCO34_24790 NZ_NPMD01000022.1 Protein Homology CDS 17278 17748 . - 0 ID=cds-WP_094965687.1;Parent=gene-CCO34_RS24805;Dbxref=GenBank:WP_094965687.1;Name=WP_094965687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490546.1;locus_tag=CCO34_RS24805;product=hypothetical protein;protein_id=WP_094965687.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 18259 18681 . + . ID=gene-CCO34_RS24810;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=CCO34_RS24810;old_locus_tag=CCO34_24795 NZ_NPMD01000022.1 Protein Homology CDS 18259 18681 . + 0 ID=cds-WP_044127552.1;Parent=gene-CCO34_RS24810;Dbxref=GenBank:WP_044127552.1;Name=WP_044127552.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490545.1;locus_tag=CCO34_RS24810;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_044127552.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 18681 19955 . + . ID=gene-CCO34_RS24815;Name=CCO34_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24815;old_locus_tag=CCO34_24800 NZ_NPMD01000022.1 Protein Homology CDS 18681 19955 . + 0 ID=cds-WP_094965688.1;Parent=gene-CCO34_RS24815;Dbxref=GenBank:WP_094965688.1;Name=WP_094965688.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490544.1;locus_tag=CCO34_RS24815;product=Y-family DNA polymerase;protein_id=WP_094965688.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 20037 21011 . - . ID=gene-CCO34_RS24820;Name=CCO34_RS24820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24820;old_locus_tag=CCO34_24805 NZ_NPMD01000022.1 Protein Homology CDS 20037 21011 . - 0 ID=cds-WP_176452918.1;Parent=gene-CCO34_RS24820;Dbxref=GenBank:WP_176452918.1;Name=WP_176452918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229774.1;locus_tag=CCO34_RS24820;product=ParB family protein;protein_id=WP_176452918.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 21011 22216 . - . ID=gene-CCO34_RS24825;Name=CCO34_RS24825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24825;old_locus_tag=CCO34_24810 NZ_NPMD01000022.1 Protein Homology CDS 21011 22216 . - 0 ID=cds-WP_000427674.1;Parent=gene-CCO34_RS24825;Dbxref=GenBank:WP_000427674.1;Name=WP_000427674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490542.1;locus_tag=CCO34_RS24825;product=AAA family ATPase;protein_id=WP_000427674.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 22643 23584 . + . ID=gene-CCO34_RS24830;Name=CCO34_RS24830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24830;old_locus_tag=CCO34_24815 NZ_NPMD01000022.1 Protein Homology CDS 22643 23584 . + 0 ID=cds-WP_000728919.1;Parent=gene-CCO34_RS24830;Dbxref=GenBank:WP_000728919.1;Name=WP_000728919.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=CCO34_RS24830;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000728919.1;transl_table=11 NZ_NPMD01000022.1 RefSeq gene 23735 24054 . - . ID=gene-CCO34_RS24835;Name=CCO34_RS24835;end_range=24054,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24835;old_locus_tag=CCO34_24820;partial=true NZ_NPMD01000022.1 Protein Homology CDS 23735 24054 . - 2 ID=cds-WP_140428489.1;Parent=gene-CCO34_RS24835;Dbxref=GenBank:WP_140428489.1;Name=WP_140428489.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=24054,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083588.1;locus_tag=CCO34_RS24835;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_140428489.1;transl_table=11 ##sequence-region NZ_NPMD01000023.1 1 10220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000023.1 RefSeq region 1 10220 . + . ID=NZ_NPMD01000023.1:1..10220;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000023.1 RefSeq gene 976 1707 . - . ID=gene-CCO34_RS24845;Name=CCO34_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24845;old_locus_tag=CCO34_24830 NZ_NPMD01000023.1 Protein Homology CDS 976 1707 . - 0 ID=cds-WP_094965691.1;Parent=gene-CCO34_RS24845;Dbxref=GenBank:WP_094965691.1;Name=WP_094965691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144089.1;locus_tag=CCO34_RS24845;product=type III secretion system effector phosphothreonine lyase;protein_id=WP_094965691.1;transl_table=11 NZ_NPMD01000023.1 RefSeq pseudogene 2109 2347 . - . ID=gene-CCO34_RS24855;Name=CCO34_RS24855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS24855;old_locus_tag=CCO34_24840;pseudo=true NZ_NPMD01000023.1 Protein Homology CDS 2109 2347 . - 0 ID=cds-CCO34_RS24855;Parent=gene-CCO34_RS24855;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000371884.1;locus_tag=CCO34_RS24855;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000023.1 RefSeq gene 2425 2562 . - . ID=gene-CCO34_RS25650;Name=CCO34_RS25650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25650 NZ_NPMD01000023.1 GeneMarkS-2+ CDS 2425 2562 . - 0 ID=cds-WP_176452919.1;Parent=gene-CCO34_RS25650;Dbxref=GenBank:WP_176452919.1;Name=WP_176452919.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25650;product=hypothetical protein;protein_id=WP_176452919.1;transl_table=11 NZ_NPMD01000023.1 RefSeq gene 2596 3729 . + . ID=gene-CCO34_RS24860;Name=CCO34_RS24860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24860;old_locus_tag=CCO34_24845 NZ_NPMD01000023.1 Protein Homology CDS 2596 3729 . + 0 ID=cds-WP_094965692.1;Parent=gene-CCO34_RS24860;Dbxref=GenBank:WP_094965692.1;Name=WP_094965692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483870.1;locus_tag=CCO34_RS24860;product=DUF3800 domain-containing protein;protein_id=WP_094965692.1;transl_table=11 NZ_NPMD01000023.1 RefSeq gene 3769 4143 . - . ID=gene-CCO34_RS25995;Name=CCO34_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25995 NZ_NPMD01000023.1 GeneMarkS-2+ CDS 3769 4143 . - 0 ID=cds-WP_237585423.1;Parent=gene-CCO34_RS25995;Dbxref=GenBank:WP_237585423.1;Name=WP_237585423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25995;product=hypothetical protein;protein_id=WP_237585423.1;transl_table=11 NZ_NPMD01000023.1 RefSeq gene 4648 5505 . - . ID=gene-CCO34_RS24875;Name=CCO34_RS24875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24875;old_locus_tag=CCO34_24860 NZ_NPMD01000023.1 Protein Homology CDS 4648 5505 . - 0 ID=cds-WP_094965693.1;Parent=gene-CCO34_RS24875;Dbxref=GenBank:WP_094965693.1;Name=WP_094965693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531545.1;locus_tag=CCO34_RS24875;product=DUF4435 domain-containing protein;protein_id=WP_094965693.1;transl_table=11 NZ_NPMD01000023.1 RefSeq gene 5506 6750 . - . ID=gene-CCO34_RS24880;Name=CCO34_RS24880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24880;old_locus_tag=CCO34_24865 NZ_NPMD01000023.1 Protein Homology CDS 5506 6750 . - 0 ID=cds-WP_094965694.1;Parent=gene-CCO34_RS24880;Dbxref=GenBank:WP_094965694.1;Name=WP_094965694.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531543.1;locus_tag=CCO34_RS24880;product=AAA family ATPase;protein_id=WP_094965694.1;transl_table=11 NZ_NPMD01000023.1 RefSeq gene 6892 7224 . + . ID=gene-CCO34_RS24885;Name=CCO34_RS24885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24885;old_locus_tag=CCO34_24870 NZ_NPMD01000023.1 Protein Homology CDS 6892 7224 . + 0 ID=cds-WP_423825528.1;Parent=gene-CCO34_RS24885;Dbxref=GenBank:WP_423825528.1;Name=WP_423825528.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025126.6;locus_tag=CCO34_RS24885;product=transposase;protein_id=WP_423825528.1;transl_table=11 NZ_NPMD01000023.1 RefSeq gene 7496 7912 . - . ID=gene-CCO34_RS24890;Name=CCO34_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24890;old_locus_tag=CCO34_24875 NZ_NPMD01000023.1 Protein Homology CDS 7496 7912 . - 0 ID=cds-WP_094965695.1;Parent=gene-CCO34_RS24890;Dbxref=GenBank:WP_094965695.1;Name=WP_094965695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229630.1;locus_tag=CCO34_RS24890;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_094965695.1;transl_table=11 NZ_NPMD01000023.1 RefSeq gene 7909 8139 . - . ID=gene-CCO34_RS24895;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=CCO34_RS24895;old_locus_tag=CCO34_24880 NZ_NPMD01000023.1 Protein Homology CDS 7909 8139 . - 0 ID=cds-WP_001261285.1;Parent=gene-CCO34_RS24895;Dbxref=GenBank:WP_001261285.1;Name=WP_001261285.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=CCO34_RS24895;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_001261285.1;transl_table=11 NZ_NPMD01000023.1 RefSeq gene 8885 9103 . + . ID=gene-CCO34_RS24905;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=CCO34_RS24905;old_locus_tag=CCO34_24890 NZ_NPMD01000023.1 Protein Homology CDS 8885 9103 . + 0 ID=cds-WP_000813642.1;Parent=gene-CCO34_RS24905;Dbxref=GenBank:WP_000813642.1;Name=WP_000813642.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490517.1;locus_tag=CCO34_RS24905;product=type II toxin-antitoxin system antitoxin CcdA;protein_id=WP_000813642.1;transl_table=11 NZ_NPMD01000023.1 RefSeq gene 9105 9410 . + . ID=gene-CCO34_RS24910;Name=ccdB;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=CCO34_RS24910;old_locus_tag=CCO34_24895 NZ_NPMD01000023.1 Protein Homology CDS 9105 9410 . + 0 ID=cds-WP_001159874.1;Parent=gene-CCO34_RS24910;Dbxref=GenBank:WP_001159874.1;Name=WP_001159874.1;gbkey=CDS;gene=ccdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052635.1;locus_tag=CCO34_RS24910;product=type II toxin-antitoxin system toxin CcdB;protein_id=WP_001159874.1;transl_table=11 NZ_NPMD01000023.1 RefSeq pseudogene 9468 9605 . + . ID=gene-CCO34_RS24915;Name=CCO34_RS24915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS24915;old_locus_tag=CCO34_24900;partial=true;pseudo=true;start_range=.,9468 NZ_NPMD01000023.1 Protein Homology CDS 9468 9605 . + 0 ID=cds-CCO34_RS24915;Parent=gene-CCO34_RS24915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490520.1;locus_tag=CCO34_RS24915;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9468;transl_table=11 NZ_NPMD01000023.1 RefSeq pseudogene 9718 10220 . + . ID=gene-CCO34_RS24920;Name=CCO34_RS24920;end_range=10220,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS24920;old_locus_tag=CCO34_24905;partial=true;pseudo=true NZ_NPMD01000023.1 Protein Homology CDS 9718 10220 . + 0 ID=cds-CCO34_RS24920;Parent=gene-CCO34_RS24920;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10220,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490521.1;locus_tag=CCO34_RS24920;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 ##sequence-region NZ_NPMD01000024.1 1 9071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000024.1 RefSeq region 1 9071 . + . ID=NZ_NPMD01000024.1:1..9071;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000024.1 RefSeq gene 552 1898 . + . ID=gene-CCO34_RS24925;Name=CCO34_RS24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24925;old_locus_tag=CCO34_24910 NZ_NPMD01000024.1 Protein Homology CDS 552 1898 . + 0 ID=cds-WP_094965700.1;Parent=gene-CCO34_RS24925;Dbxref=GenBank:WP_094965700.1;Name=WP_094965700.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611902.1;locus_tag=CCO34_RS24925;product=ISNCY family transposase;protein_id=WP_094965700.1;transl_table=11 NZ_NPMD01000024.1 RefSeq gene 1957 2751 . + . ID=gene-CCO34_RS24930;Name=CCO34_RS24930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24930;old_locus_tag=CCO34_24915 NZ_NPMD01000024.1 Protein Homology CDS 1957 2751 . + 0 ID=cds-WP_094965696.1;Parent=gene-CCO34_RS24930;Dbxref=GenBank:WP_094965696.1;Name=WP_094965696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187050.1;locus_tag=CCO34_RS24930;product=tetratricopeptide repeat protein;protein_id=WP_094965696.1;transl_table=11 NZ_NPMD01000024.1 RefSeq gene 2791 4332 . - . ID=gene-CCO34_RS24935;Name=CCO34_RS24935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24935;old_locus_tag=CCO34_24920 NZ_NPMD01000024.1 Protein Homology CDS 2791 4332 . - 0 ID=cds-WP_237585424.1;Parent=gene-CCO34_RS24935;Dbxref=GenBank:WP_237585424.1;Name=WP_237585424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704593.1;locus_tag=CCO34_RS24935;product=hypothetical protein;protein_id=WP_237585424.1;transl_table=11 NZ_NPMD01000024.1 RefSeq gene 4840 5016 . - . ID=gene-CCO34_RS25655;Name=CCO34_RS25655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25655 NZ_NPMD01000024.1 GeneMarkS-2+ CDS 4840 5016 . - 0 ID=cds-WP_176210939.1;Parent=gene-CCO34_RS25655;Dbxref=GenBank:WP_176210939.1;Name=WP_176210939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25655;product=hypothetical protein;protein_id=WP_176210939.1;transl_table=11 NZ_NPMD01000024.1 RefSeq gene 5069 5446 . + . ID=gene-CCO34_RS25495;Name=CCO34_RS25495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25495 NZ_NPMD01000024.1 GeneMarkS-2+ CDS 5069 5446 . + 0 ID=cds-WP_140428492.1;Parent=gene-CCO34_RS25495;Dbxref=GenBank:WP_140428492.1;Name=WP_140428492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25495;product=hypothetical protein;protein_id=WP_140428492.1;transl_table=11 NZ_NPMD01000024.1 RefSeq gene 5744 6529 . - . ID=gene-CCO34_RS25500;Name=CCO34_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25500 NZ_NPMD01000024.1 GeneMarkS-2+ CDS 5744 6529 . - 0 ID=cds-WP_140428493.1;Parent=gene-CCO34_RS25500;Dbxref=GenBank:WP_140428493.1;Name=WP_140428493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25500;product=hypothetical protein;protein_id=WP_140428493.1;transl_table=11 NZ_NPMD01000024.1 RefSeq gene 7553 8650 . + . ID=gene-CCO34_RS24950;Name=CCO34_RS24950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24950;old_locus_tag=CCO34_24935 NZ_NPMD01000024.1 GeneMarkS-2+ CDS 7553 8650 . + 0 ID=cds-WP_140428494.1;Parent=gene-CCO34_RS24950;Dbxref=GenBank:WP_140428494.1;Name=WP_140428494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS24950;product=hypothetical protein;protein_id=WP_140428494.1;transl_table=11 NZ_NPMD01000024.1 RefSeq gene 8883 9071 . - . ID=gene-CCO34_RS26000;Name=CCO34_RS26000;end_range=9071,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26000;partial=true NZ_NPMD01000024.1 GeneMarkS-2+ CDS 8883 9071 . - 0 ID=cds-WP_237585425.1;Parent=gene-CCO34_RS26000;Dbxref=GenBank:WP_237585425.1;Name=WP_237585425.1;end_range=9071,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS26000;partial=true;product=hypothetical protein;protein_id=WP_237585425.1;transl_table=11 ##sequence-region NZ_NPMD01000025.1 1 6943 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000025.1 RefSeq region 1 6943 . + . ID=NZ_NPMD01000025.1:1..6943;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000025.1 RefSeq gene 306 872 . - . ID=gene-CCO34_RS24955;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=CCO34_RS24955;old_locus_tag=CCO34_24940 NZ_NPMD01000025.1 Protein Homology CDS 306 872 . - 0 ID=cds-WP_001051726.1;Parent=gene-CCO34_RS24955;Dbxref=GenBank:WP_001051726.1;Name=WP_001051726.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=CCO34_RS24955;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001051726.1;transl_table=11 NZ_NPMD01000025.1 RefSeq gene 1062 2093 . + . ID=gene-CCO34_RS24960;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=CCO34_RS24960;old_locus_tag=CCO34_24945 NZ_NPMD01000025.1 Protein Homology CDS 1062 2093 . + 0 ID=cds-WP_000594021.1;Parent=gene-CCO34_RS24960;Dbxref=GenBank:WP_000594021.1;Name=WP_000594021.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=CCO34_RS24960;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594021.1;transl_table=11 NZ_NPMD01000025.1 RefSeq gene 2086 2739 . + . ID=gene-CCO34_RS24965;Name=CCO34_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24965;old_locus_tag=CCO34_24950 NZ_NPMD01000025.1 Protein Homology CDS 2086 2739 . + 0 ID=cds-WP_001287486.1;Parent=gene-CCO34_RS24965;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=CCO34_RS24965;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11 NZ_NPMD01000025.1 RefSeq gene 2778 3593 . + . ID=gene-CCO34_RS24970;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=CCO34_RS24970;old_locus_tag=CCO34_24955 NZ_NPMD01000025.1 Protein Homology CDS 2778 3593 . + 0 ID=cds-WP_000874215.1;Parent=gene-CCO34_RS24970;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=CCO34_RS24970;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11 NZ_NPMD01000025.1 RefSeq gene 3712 4116 . + . ID=gene-CCO34_RS24975;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=CCO34_RS24975;old_locus_tag=CCO34_24960 NZ_NPMD01000025.1 Protein Homology CDS 3712 4116 . + 0 ID=cds-WP_001202315.1;Parent=gene-CCO34_RS24975;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=CCO34_RS24975;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11 NZ_NPMD01000025.1 RefSeq gene 4113 4820 . + . ID=gene-CCO34_RS24980;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=CCO34_RS24980;old_locus_tag=CCO34_24965 NZ_NPMD01000025.1 Protein Homology CDS 4113 4820 . + 0 ID=cds-WP_000093988.1;Parent=gene-CCO34_RS24980;Dbxref=GenBank:WP_000093988.1;Name=WP_000093988.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=CCO34_RS24980;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093988.1;transl_table=11 NZ_NPMD01000025.1 RefSeq gene 4931 6649 . + . ID=gene-CCO34_RS24985;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=CCO34_RS24985;old_locus_tag=CCO34_24970 NZ_NPMD01000025.1 Protein Homology CDS 4931 6649 . + 0 ID=cds-WP_001260683.1;Parent=gene-CCO34_RS24985;Dbxref=GenBank:WP_001260683.1;Name=WP_001260683.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=CCO34_RS24985;product=proline--tRNA ligase;protein_id=WP_001260683.1;transl_table=11 NZ_NPMD01000025.1 RefSeq gene 6784 6943 . + . ID=gene-CCO34_RS24990;Name=CCO34_RS24990;end_range=6943,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24990;old_locus_tag=CCO34_24975;partial=true NZ_NPMD01000025.1 Protein Homology CDS 6784 6943 . + 0 ID=cds-WP_130587684.1-2;Parent=gene-CCO34_RS24990;Dbxref=GenBank:WP_130587684.1;Name=WP_130587684.1;end_range=6943,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO34_RS24990;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_130587684.1;transl_table=11 ##sequence-region NZ_NPMD01000026.1 1 4934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000026.1 RefSeq region 1 4934 . + . ID=NZ_NPMD01000026.1:1..4934;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000026.1 RefSeq gene 413 841 . + . ID=gene-CCO34_RS24995;Name=CCO34_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS24995;old_locus_tag=CCO34_24980 NZ_NPMD01000026.1 Protein Homology CDS 413 841 . + 0 ID=cds-WP_094965701.1;Parent=gene-CCO34_RS24995;Dbxref=GenBank:WP_094965701.1;Name=WP_094965701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323545.1;locus_tag=CCO34_RS24995;product=universal stress protein;protein_id=WP_094965701.1;transl_table=11 NZ_NPMD01000026.1 RefSeq gene 1604 2203 . + . ID=gene-CCO34_RS25505;Name=CCO34_RS25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25505 NZ_NPMD01000026.1 GeneMarkS-2+ CDS 1604 2203 . + 0 ID=cds-WP_140428495.1;Parent=gene-CCO34_RS25505;Dbxref=GenBank:WP_140428495.1;Name=WP_140428495.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25505;product=hypothetical protein;protein_id=WP_140428495.1;transl_table=11 NZ_NPMD01000026.1 RefSeq pseudogene 2285 2441 . + . ID=gene-CCO34_RS26005;Name=CCO34_RS26005;end_range=2441,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26005;partial=true;pseudo=true;start_range=.,2285 NZ_NPMD01000026.1 Protein Homology CDS 2285 2441 . + 0 ID=cds-CCO34_RS26005;Parent=gene-CCO34_RS26005;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2441,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595120.1;locus_tag=CCO34_RS26005;partial=true;product=type II toxin-antitoxin system Phd/YefM family antitoxin;pseudo=true;start_range=.,2285;transl_table=11 NZ_NPMD01000026.1 RefSeq pseudogene 2439 2674 . + . ID=gene-CCO34_RS25715;Name=CCO34_RS25715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25715;old_locus_tag=CCO34_24985;pseudo=true NZ_NPMD01000026.1 Protein Homology CDS 2439 2674 . + 0 ID=cds-CCO34_RS25715;Parent=gene-CCO34_RS25715;Note=frameshifted;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156226.1;locus_tag=CCO34_RS25715;product=type II toxin-antitoxin system RelE family toxin;pseudo=true;transl_table=11 NZ_NPMD01000026.1 RefSeq gene 2601 3746 . - . ID=gene-CCO34_RS25005;Name=CCO34_RS25005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25005;old_locus_tag=CCO34_24990 NZ_NPMD01000026.1 GeneMarkS-2+ CDS 2601 3746 . - 0 ID=cds-WP_176452920.1;Parent=gene-CCO34_RS25005;Dbxref=GenBank:WP_176452920.1;Name=WP_176452920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25005;product=hypothetical protein;protein_id=WP_176452920.1;transl_table=11 NZ_NPMD01000026.1 RefSeq pseudogene 4635 4934 . - . ID=gene-CCO34_RS25015;Name=CCO34_RS25015;end_range=4934,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25015;old_locus_tag=CCO34_25000;partial=true;pseudo=true NZ_NPMD01000026.1 Protein Homology CDS 4635 4934 . - 0 ID=cds-CCO34_RS25015;Parent=gene-CCO34_RS25015;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4934,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232890.1;locus_tag=CCO34_RS25015;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_NPMD01000027.1 1 4523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000027.1 RefSeq region 1 4523 . + . ID=NZ_NPMD01000027.1:1..4523;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000027.1 RefSeq gene 10 125 . + . ID=gene-CCO34_RS25020;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO34_RS25020;old_locus_tag=CCO34_25005 NZ_NPMD01000027.1 cmsearch rRNA 10 125 . + . ID=rna-CCO34_RS25020;Parent=gene-CCO34_RS25020;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25020;product=5S ribosomal RNA NZ_NPMD01000027.1 cmsearch exon 10 125 . + . ID=exon-CCO34_RS25020-1;Parent=rna-CCO34_RS25020;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25020;product=5S ribosomal RNA NZ_NPMD01000027.1 RefSeq gene 307 1335 . + . ID=gene-CCO34_RS25025;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CCO34_RS25025;old_locus_tag=CCO34_25010 NZ_NPMD01000027.1 Protein Homology CDS 307 1335 . + 0 ID=cds-WP_000149796.1;Parent=gene-CCO34_RS25025;Dbxref=GenBank:WP_000149796.1;Name=WP_000149796.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=CCO34_RS25025;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149796.1;transl_table=11 NZ_NPMD01000027.1 RefSeq gene 1332 2294 . + . ID=gene-CCO34_RS25030;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=CCO34_RS25030;old_locus_tag=CCO34_25015 NZ_NPMD01000027.1 Protein Homology CDS 1332 2294 . + 0 ID=cds-WP_000655746.1;Parent=gene-CCO34_RS25030;Dbxref=GenBank:WP_000655746.1;Name=WP_000655746.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=CCO34_RS25030;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11 NZ_NPMD01000027.1 RefSeq gene 2329 3279 . - . ID=gene-CCO34_RS25035;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=CCO34_RS25035;old_locus_tag=CCO34_25020 NZ_NPMD01000027.1 Protein Homology CDS 2329 3279 . - 0 ID=cds-WP_000023068.1;Parent=gene-CCO34_RS25035;Dbxref=GenBank:WP_000023068.1;Name=WP_000023068.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=CCO34_RS25035;product=type I pantothenate kinase;protein_id=WP_000023068.1;transl_table=11 NZ_NPMD01000027.1 RefSeq gene 3488 3661 . - . ID=gene-CCO34_RS25045;Name=CCO34_RS25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25045;old_locus_tag=CCO34_25030 NZ_NPMD01000027.1 Protein Homology CDS 3488 3661 . - 0 ID=cds-WP_001541267.1;Parent=gene-CCO34_RS25045;Dbxref=GenBank:WP_001541267.1;Name=WP_001541267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=CCO34_RS25045;product=hypothetical protein;protein_id=WP_001541267.1;transl_table=11 NZ_NPMD01000027.1 RefSeq gene 3681 3756 . + . ID=gene-CCO34_RS25050;Name=CCO34_RS25050;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS25050;old_locus_tag=CCO34_25035 NZ_NPMD01000027.1 tRNAscan-SE tRNA 3681 3756 . + . ID=rna-CCO34_RS25050;Parent=gene-CCO34_RS25050;anticodon=(pos:3714..3716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25050;product=tRNA-Thr NZ_NPMD01000027.1 tRNAscan-SE exon 3681 3756 . + . ID=exon-CCO34_RS25050-1;Parent=rna-CCO34_RS25050;anticodon=(pos:3714..3716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25050;product=tRNA-Thr NZ_NPMD01000027.1 RefSeq gene 3765 3849 . + . ID=gene-CCO34_RS25055;Name=CCO34_RS25055;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS25055;old_locus_tag=CCO34_25040 NZ_NPMD01000027.1 tRNAscan-SE tRNA 3765 3849 . + . ID=rna-CCO34_RS25055;Parent=gene-CCO34_RS25055;anticodon=(pos:3799..3801);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25055;product=tRNA-Tyr NZ_NPMD01000027.1 tRNAscan-SE exon 3765 3849 . + . ID=exon-CCO34_RS25055-1;Parent=rna-CCO34_RS25055;anticodon=(pos:3799..3801);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25055;product=tRNA-Tyr NZ_NPMD01000027.1 RefSeq gene 3966 4040 . + . ID=gene-CCO34_RS25060;Name=CCO34_RS25060;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS25060;old_locus_tag=CCO34_25045 NZ_NPMD01000027.1 tRNAscan-SE tRNA 3966 4040 . + . ID=rna-CCO34_RS25060;Parent=gene-CCO34_RS25060;anticodon=(pos:3999..4001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25060;product=tRNA-Gly NZ_NPMD01000027.1 tRNAscan-SE exon 3966 4040 . + . ID=exon-CCO34_RS25060-1;Parent=rna-CCO34_RS25060;anticodon=(pos:3999..4001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25060;product=tRNA-Gly NZ_NPMD01000027.1 RefSeq gene 4047 4122 . + . ID=gene-CCO34_RS25065;Name=CCO34_RS25065;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS25065;old_locus_tag=CCO34_25050 NZ_NPMD01000027.1 tRNAscan-SE tRNA 4047 4122 . + . ID=rna-CCO34_RS25065;Parent=gene-CCO34_RS25065;anticodon=(pos:4080..4082);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25065;product=tRNA-Thr NZ_NPMD01000027.1 tRNAscan-SE exon 4047 4122 . + . ID=exon-CCO34_RS25065-1;Parent=rna-CCO34_RS25065;anticodon=(pos:4080..4082);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25065;product=tRNA-Thr NZ_NPMD01000027.1 RefSeq gene 4238 4523 . + . ID=gene-CCO34_RS25070;Name=CCO34_RS25070;end_range=4523,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25070;old_locus_tag=CCO34_25055;partial=true NZ_NPMD01000027.1 Protein Homology CDS 4238 4523 . + 0 ID=cds-WP_000031682.1-2;Parent=gene-CCO34_RS25070;Dbxref=GenBank:WP_000031682.1;Name=WP_000031682.1;Ontology_term=GO:0003924,GO:0005525;end_range=4523,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO34_RS25070;partial=true;product=GTP-binding protein;protein_id=WP_000031682.1;transl_table=11 ##sequence-region NZ_NPMD01000028.1 1 4311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000028.1 RefSeq region 1 4311 . + . ID=NZ_NPMD01000028.1:1..4311;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000028.1 RefSeq gene 1 647 . - . ID=gene-CCO34_RS25075;Name=CCO34_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25075;old_locus_tag=CCO34_25060;partial=true;start_range=.,1 NZ_NPMD01000028.1 Protein Homology CDS 1 647 . - 0 ID=cds-WP_094965703.1;Parent=gene-CCO34_RS25075;Dbxref=GenBank:WP_094965703.1;Name=WP_094965703.1;Ontology_term=GO:0017004,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=CCO34_RS25075;partial=true;product=cytochrome c-type biogenesis protein;protein_id=WP_094965703.1;start_range=.,1;transl_table=11 NZ_NPMD01000028.1 RefSeq gene 644 1201 . - . ID=gene-CCO34_RS25080;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=CCO34_RS25080;old_locus_tag=CCO34_25065 NZ_NPMD01000028.1 Protein Homology CDS 644 1201 . - 0 ID=cds-WP_000828284.1;Parent=gene-CCO34_RS25080;Dbxref=GenBank:WP_000828284.1;Name=WP_000828284.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=CCO34_RS25080;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828284.1;transl_table=11 NZ_NPMD01000028.1 RefSeq gene 1198 3129 . - . ID=gene-CCO34_RS25085;Name=CCO34_RS25085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25085;old_locus_tag=CCO34_25070 NZ_NPMD01000028.1 Protein Homology CDS 1198 3129 . - 0 ID=cds-WP_094965704.1;Parent=gene-CCO34_RS25085;Dbxref=GenBank:WP_094965704.1;Name=WP_094965704.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=CCO34_RS25085;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_094965704.1;transl_table=11 NZ_NPMD01000028.1 RefSeq gene 3126 3605 . - . ID=gene-CCO34_RS25090;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=CCO34_RS25090;old_locus_tag=CCO34_25075 NZ_NPMD01000028.1 Protein Homology CDS 3126 3605 . - 0 ID=cds-WP_001675710.1;Parent=gene-CCO34_RS25090;Dbxref=GenBank:WP_001675710.1;Name=WP_001675710.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=CCO34_RS25090;product=cytochrome c maturation protein CcmE;protein_id=WP_001675710.1;transl_table=11 NZ_NPMD01000028.1 RefSeq gene 3602 3814 . - . ID=gene-CCO34_RS25095;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=CCO34_RS25095;old_locus_tag=CCO34_25080 NZ_NPMD01000028.1 Protein Homology CDS 3602 3814 . - 0 ID=cds-WP_000074113.1;Parent=gene-CCO34_RS25095;Dbxref=GenBank:WP_000074113.1;Name=WP_000074113.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=CCO34_RS25095;product=heme exporter protein CcmD;protein_id=WP_000074113.1;transl_table=11 NZ_NPMD01000028.1 RefSeq gene 3811 4311 . - . ID=gene-CCO34_RS25100;Name=ccmC;end_range=4311,.;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=CCO34_RS25100;old_locus_tag=CCO34_25085;partial=true NZ_NPMD01000028.1 Protein Homology CDS 3811 4311 . - 0 ID=cds-WP_039591408.1;Parent=gene-CCO34_RS25100;Dbxref=GenBank:WP_039591408.1;Name=WP_039591408.1;Ontology_term=GO:0015886,GO:0017004,GO:0015232,GO:0016020;end_range=4311,.;gbkey=CDS;gene=ccmC;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO34_RS25100;partial=true;product=heme ABC transporter permease CcmC;protein_id=WP_039591408.1;transl_table=11 ##sequence-region NZ_NPMD01000029.1 1 2186 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000029.1 RefSeq region 1 2186 . + . ID=NZ_NPMD01000029.1:1..2186;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000029.1 RefSeq gene 1 276 . + . ID=gene-CCO34_RS25105;Name=CCO34_RS25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25105;old_locus_tag=CCO34_25090;partial=true;start_range=.,1 NZ_NPMD01000029.1 Protein Homology CDS 1 276 . + 0 ID=cds-WP_176452921.1;Parent=gene-CCO34_RS25105;Dbxref=GenBank:WP_176452921.1;Name=WP_176452921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418358.1;locus_tag=CCO34_RS25105;partial=true;product=universal stress protein;protein_id=WP_176452921.1;start_range=.,1;transl_table=11 NZ_NPMD01000029.1 RefSeq gene 554 1507 . - . ID=gene-CCO34_RS25110;Name=CCO34_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25110;old_locus_tag=CCO34_25095 NZ_NPMD01000029.1 Protein Homology CDS 554 1507 . - 0 ID=cds-WP_094965705.1;Parent=gene-CCO34_RS25110;Dbxref=GenBank:WP_094965705.1;Name=WP_094965705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232890.1;locus_tag=CCO34_RS25110;product=hypothetical protein;protein_id=WP_094965705.1;transl_table=11 NZ_NPMD01000029.1 RefSeq pseudogene 1938 2186 . - . ID=gene-CCO34_RS26015;Name=CCO34_RS26015;end_range=2186,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26015;partial=true;pseudo=true NZ_NPMD01000029.1 Protein Homology CDS 1938 2186 . - 0 ID=cds-CCO34_RS26015;Parent=gene-CCO34_RS26015;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2186,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232890.1;locus_tag=CCO34_RS26015;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_NPMD01000003.1 1 615122 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000003.1 RefSeq region 1 615122 . + . ID=NZ_NPMD01000003.1:1..615122;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000003.1 RefSeq gene 1 234 . + . ID=gene-CCO34_RS07585;Name=CCO34_RS07585;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO34_RS07585;old_locus_tag=CCO34_07580;partial=true;start_range=.,1 NZ_NPMD01000003.1 cmsearch rRNA 1 234 . + . ID=rna-CCO34_RS07585;Parent=gene-CCO34_RS07585;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS07585;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMD01000003.1 cmsearch exon 1 234 . + . ID=exon-CCO34_RS07585-1;Parent=rna-CCO34_RS07585;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS07585;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMD01000003.1 RefSeq gene 328 443 . + . ID=gene-CCO34_RS07590;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO34_RS07590;old_locus_tag=CCO34_07585 NZ_NPMD01000003.1 cmsearch rRNA 328 443 . + . ID=rna-CCO34_RS07590;Parent=gene-CCO34_RS07590;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS07590;product=5S ribosomal RNA NZ_NPMD01000003.1 cmsearch exon 328 443 . + . ID=exon-CCO34_RS07590-1;Parent=rna-CCO34_RS07590;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS07590;product=5S ribosomal RNA NZ_NPMD01000003.1 RefSeq gene 458 533 . + . ID=gene-CCO34_RS07595;Name=CCO34_RS07595;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS07595;old_locus_tag=CCO34_07590 NZ_NPMD01000003.1 tRNAscan-SE tRNA 458 533 . + . ID=rna-CCO34_RS07595;Parent=gene-CCO34_RS07595;anticodon=(pos:491..493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS07595;product=tRNA-Thr NZ_NPMD01000003.1 tRNAscan-SE exon 458 533 . + . ID=exon-CCO34_RS07595-1;Parent=rna-CCO34_RS07595;anticodon=(pos:491..493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS07595;product=tRNA-Thr NZ_NPMD01000003.1 RefSeq gene 573 688 . + . ID=gene-CCO34_RS07600;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO34_RS07600;old_locus_tag=CCO34_07595 NZ_NPMD01000003.1 cmsearch rRNA 573 688 . + . ID=rna-CCO34_RS07600;Parent=gene-CCO34_RS07600;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS07600;product=5S ribosomal RNA NZ_NPMD01000003.1 cmsearch exon 573 688 . + . ID=exon-CCO34_RS07600-1;Parent=rna-CCO34_RS07600;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS07600;product=5S ribosomal RNA NZ_NPMD01000003.1 RefSeq gene 1472 1693 . - . ID=gene-CCO34_RS07605;Name=CCO34_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07605;old_locus_tag=CCO34_07600 NZ_NPMD01000003.1 Protein Homology CDS 1472 1693 . - 0 ID=cds-WP_000825645.1;Parent=gene-CCO34_RS07605;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=CCO34_RS07605;product=membrane protein;protein_id=WP_000825645.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 1930 5043 . - . ID=gene-CCO34_RS07610;Name=CCO34_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07610;old_locus_tag=CCO34_07605 NZ_NPMD01000003.1 Protein Homology CDS 1930 5043 . - 0 ID=cds-WP_001273283.1;Parent=gene-CCO34_RS07610;Dbxref=GenBank:WP_001273283.1;Name=WP_001273283.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=CCO34_RS07610;product=efflux RND transporter permease subunit;protein_id=WP_001273283.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 5055 6212 . - . ID=gene-CCO34_RS07615;Name=CCO34_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07615;old_locus_tag=CCO34_07610 NZ_NPMD01000003.1 Protein Homology CDS 5055 6212 . - 0 ID=cds-WP_000160383.1;Parent=gene-CCO34_RS07615;Dbxref=GenBank:WP_000160383.1;Name=WP_000160383.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=CCO34_RS07615;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000160383.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 6626 7288 . + . ID=gene-CCO34_RS07620;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=CCO34_RS07620;old_locus_tag=CCO34_07615 NZ_NPMD01000003.1 Protein Homology CDS 6626 7288 . + 0 ID=cds-WP_094965416.1;Parent=gene-CCO34_RS07620;Dbxref=GenBank:WP_094965416.1;Name=WP_094965416.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=CCO34_RS07620;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_094965416.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 7315 9390 . - . ID=gene-CCO34_RS07625;Name=CCO34_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07625;old_locus_tag=CCO34_07620 NZ_NPMD01000003.1 Protein Homology CDS 7315 9390 . - 0 ID=cds-WP_001535771.1;Parent=gene-CCO34_RS07625;Dbxref=GenBank:WP_001535771.1;Name=WP_001535771.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145339.1;locus_tag=CCO34_RS07625;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_001535771.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 9541 9705 . - . ID=gene-CCO34_RS07630;Name=CCO34_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07630;old_locus_tag=CCO34_07625 NZ_NPMD01000003.1 Protein Homology CDS 9541 9705 . - 0 ID=cds-WP_000620015.1;Parent=gene-CCO34_RS07630;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=CCO34_RS07630;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 9788 10672 . - . ID=gene-CCO34_RS07635;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=CCO34_RS07635;old_locus_tag=CCO34_07630 NZ_NPMD01000003.1 Protein Homology CDS 9788 10672 . - 0 ID=cds-WP_000642613.1;Parent=gene-CCO34_RS07635;Dbxref=GenBank:WP_000642613.1;Name=WP_000642613.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=CCO34_RS07635;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642613.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 10758 11054 . - . ID=gene-CCO34_RS07640;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=CCO34_RS07640;old_locus_tag=CCO34_07635 NZ_NPMD01000003.1 Protein Homology CDS 10758 11054 . - 0 ID=cds-WP_000462905.1;Parent=gene-CCO34_RS07640;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=CCO34_RS07640;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 11080 12045 . - . ID=gene-CCO34_RS07645;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CCO34_RS07645;old_locus_tag=CCO34_07640 NZ_NPMD01000003.1 Protein Homology CDS 11080 12045 . - 0 ID=cds-WP_001219666.1;Parent=gene-CCO34_RS07645;Dbxref=GenBank:WP_001219666.1;Name=WP_001219666.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=CCO34_RS07645;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219666.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 12312 12587 . - . ID=gene-CCO34_RS25270;Name=CCO34_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25270 NZ_NPMD01000003.1 Protein Homology CDS 12312 12587 . - 0 ID=cds-WP_306291986.1;Parent=gene-CCO34_RS25270;Dbxref=GenBank:WP_306291986.1;Name=WP_306291986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012420.6;locus_tag=CCO34_RS25270;product=carbonic anhydrase family protein;protein_id=WP_306291986.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 12707 13588 . - . ID=gene-CCO34_RS07650;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CCO34_RS07650;old_locus_tag=CCO34_07645 NZ_NPMD01000003.1 Protein Homology CDS 12707 13588 . - 0 ID=cds-WP_001145849.1;Parent=gene-CCO34_RS07650;Dbxref=GenBank:WP_001145849.1;Name=WP_001145849.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=CCO34_RS07650;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145849.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 13600 15051 . - . ID=gene-CCO34_RS07655;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=CCO34_RS07655;old_locus_tag=CCO34_07650 NZ_NPMD01000003.1 Protein Homology CDS 13600 15051 . - 0 ID=cds-WP_001175684.1;Parent=gene-CCO34_RS07655;Dbxref=GenBank:WP_001175684.1;Name=WP_001175684.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=CCO34_RS07655;product=sodium/pantothenate symporter;protein_id=WP_001175684.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 15041 15283 . - . ID=gene-CCO34_RS07660;Name=CCO34_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07660;old_locus_tag=CCO34_07655 NZ_NPMD01000003.1 Protein Homology CDS 15041 15283 . - 0 ID=cds-WP_000340016.1;Parent=gene-CCO34_RS07660;Dbxref=GenBank:WP_000340016.1;Name=WP_000340016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=CCO34_RS07660;product=YhdT family protein;protein_id=WP_000340016.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 15392 16741 . - . ID=gene-CCO34_RS07665;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CCO34_RS07665;old_locus_tag=CCO34_07660 NZ_NPMD01000003.1 Protein Homology CDS 15392 16741 . - 0 ID=cds-WP_000884627.1;Parent=gene-CCO34_RS07665;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=CCO34_RS07665;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 16752 17222 . - . ID=gene-CCO34_RS07670;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CCO34_RS07670;old_locus_tag=CCO34_07665 NZ_NPMD01000003.1 Protein Homology CDS 16752 17222 . - 0 ID=cds-WP_000354626.1;Parent=gene-CCO34_RS07670;Dbxref=GenBank:WP_000354626.1;Name=WP_000354626.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=CCO34_RS07670;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 17615 18214 . - . ID=gene-CCO34_RS07675;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=CCO34_RS07675;old_locus_tag=CCO34_07670 NZ_NPMD01000003.1 Protein Homology CDS 17615 18214 . - 0 ID=cds-WP_001240053.1;Parent=gene-CCO34_RS07675;Dbxref=GenBank:WP_001240053.1;Name=WP_001240053.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=CCO34_RS07675;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240053.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 18215 19219 . - . ID=gene-CCO34_RS07680;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=CCO34_RS07680;old_locus_tag=CCO34_07675 NZ_NPMD01000003.1 Protein Homology CDS 18215 19219 . - 0 ID=cds-WP_000723876.1;Parent=gene-CCO34_RS07680;Dbxref=GenBank:WP_000723876.1;Name=WP_000723876.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=CCO34_RS07680;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 19332 20306 . - . ID=gene-CCO34_RS07685;Name=CCO34_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07685;old_locus_tag=CCO34_07680 NZ_NPMD01000003.1 Protein Homology CDS 19332 20306 . - 0 ID=cds-WP_001148246.1;Parent=gene-CCO34_RS07685;Dbxref=GenBank:WP_001148246.1;Name=WP_001148246.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=CCO34_RS07685;product=MDR family oxidoreductase;protein_id=WP_001148246.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 20510 22450 . + . ID=gene-CCO34_RS07690;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=CCO34_RS07690;old_locus_tag=CCO34_07685 NZ_NPMD01000003.1 Protein Homology CDS 20510 22450 . + 0 ID=cds-WP_001241381.1;Parent=gene-CCO34_RS07690;Dbxref=GenBank:WP_001241381.1;Name=WP_001241381.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=CCO34_RS07690;product=RNase E specificity factor CsrD;protein_id=WP_001241381.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 22758 23801 . + . ID=gene-CCO34_RS07705;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=CCO34_RS07705;old_locus_tag=CCO34_07700 NZ_NPMD01000003.1 Protein Homology CDS 22758 23801 . + 0 ID=cds-WP_000913396.1;Parent=gene-CCO34_RS07705;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=CCO34_RS07705;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 23866 24918 . + . ID=gene-CCO34_RS07710;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CCO34_RS07710;old_locus_tag=CCO34_07705 NZ_NPMD01000003.1 Protein Homology CDS 23866 24918 . + 0 ID=cds-WP_000802538.1;Parent=gene-CCO34_RS07710;Dbxref=GenBank:WP_000802538.1;Name=WP_000802538.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=CCO34_RS07710;product=rod shape-determining protein MreC;protein_id=WP_000802538.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 24921 25409 . + . ID=gene-CCO34_RS07715;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CCO34_RS07715;old_locus_tag=CCO34_07710 NZ_NPMD01000003.1 Protein Homology CDS 24921 25409 . + 0 ID=cds-WP_023193610.1;Parent=gene-CCO34_RS07715;Dbxref=GenBank:WP_023193610.1;Name=WP_023193610.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=CCO34_RS07715;product=rod shape-determining protein MreD;protein_id=WP_023193610.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 25418 26011 . + . ID=gene-CCO34_RS07720;Name=CCO34_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07720;old_locus_tag=CCO34_07715 NZ_NPMD01000003.1 Protein Homology CDS 25418 26011 . + 0 ID=cds-WP_000210306.1;Parent=gene-CCO34_RS07720;Dbxref=GenBank:WP_000210306.1;Name=WP_000210306.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=CCO34_RS07720;product=Maf family protein;protein_id=WP_000210306.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 26001 27470 . + . ID=gene-CCO34_RS07725;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=CCO34_RS07725;old_locus_tag=CCO34_07720 NZ_NPMD01000003.1 Protein Homology CDS 26001 27470 . + 0 ID=cds-WP_000123188.1;Parent=gene-CCO34_RS07725;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=CCO34_RS07725;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 27577 31377 . + . ID=gene-CCO34_RS07730;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=CCO34_RS07730;old_locus_tag=CCO34_07725 NZ_NPMD01000003.1 Protein Homology CDS 27577 31377 . + 0 ID=cds-WP_001253500.1;Parent=gene-CCO34_RS07730;Dbxref=GenBank:WP_001253500.1;Name=WP_001253500.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=CCO34_RS07730;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253500.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 31522 32967 . + . ID=gene-CCO34_RS07735;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=CCO34_RS07735;old_locus_tag=CCO34_07730 NZ_NPMD01000003.1 Protein Homology CDS 31522 32967 . + 0 ID=cds-WP_000055940.1;Parent=gene-CCO34_RS07735;Dbxref=GenBank:WP_000055940.1;Name=WP_000055940.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=CCO34_RS07735;product=metalloprotease TldD;protein_id=WP_000055940.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 33090 34019 . - . ID=gene-CCO34_RS07740;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=CCO34_RS07740;old_locus_tag=CCO34_07735 NZ_NPMD01000003.1 Protein Homology CDS 33090 34019 . - 0 ID=cds-WP_000440300.1;Parent=gene-CCO34_RS07740;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=CCO34_RS07740;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 34201 34404 . + . ID=gene-CCO34_RS07745;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=CCO34_RS07745;old_locus_tag=CCO34_07740 NZ_NPMD01000003.1 Protein Homology CDS 34201 34404 . + 0 ID=cds-WP_000051840.1;Parent=gene-CCO34_RS07745;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=CCO34_RS07745;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 34412 35344 . + . ID=gene-CCO34_RS07750;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=CCO34_RS07750;old_locus_tag=CCO34_07745 NZ_NPMD01000003.1 Protein Homology CDS 34412 35344 . + 0 ID=cds-WP_000855134.1;Parent=gene-CCO34_RS07750;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=CCO34_RS07750;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 35350 37317 . + . ID=gene-CCO34_RS07755;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=CCO34_RS07755;old_locus_tag=CCO34_07750 NZ_NPMD01000003.1 Protein Homology CDS 35350 37317 . + 0 ID=cds-WP_000510913.1;Parent=gene-CCO34_RS07755;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=CCO34_RS07755;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 37489 37761 . + . ID=gene-CCO34_RS07760;Name=CCO34_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07760;old_locus_tag=CCO34_07755 NZ_NPMD01000003.1 Protein Homology CDS 37489 37761 . + 0 ID=cds-WP_001103887.1;Parent=gene-CCO34_RS07760;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=CCO34_RS07760;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 37821 38087 . - . ID=gene-CCO34_RS07765;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=CCO34_RS07765;old_locus_tag=CCO34_07760 NZ_NPMD01000003.1 Protein Homology CDS 37821 38087 . - 0 ID=cds-WP_000853277.1;Parent=gene-CCO34_RS07765;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=CCO34_RS07765;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 38191 38454 . - . ID=gene-CCO34_RS07770;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=CCO34_RS07770;old_locus_tag=CCO34_07765 NZ_NPMD01000003.1 Protein Homology CDS 38191 38454 . - 0 ID=cds-WP_000695693.1;Parent=gene-CCO34_RS07770;Dbxref=GenBank:WP_000695693.1;Name=WP_000695693.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=CCO34_RS07770;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695693.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 38819 39289 . - . ID=gene-CCO34_RS07775;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=CCO34_RS07775;old_locus_tag=CCO34_07770 NZ_NPMD01000003.1 Protein Homology CDS 38819 39289 . - 0 ID=cds-WP_001257852.1;Parent=gene-CCO34_RS07775;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=CCO34_RS07775;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 39704 40642 . + . ID=gene-CCO34_RS07780;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CCO34_RS07780;old_locus_tag=CCO34_07775 NZ_NPMD01000003.1 Protein Homology CDS 39704 40642 . + 0 ID=cds-WP_000861591.1;Parent=gene-CCO34_RS07780;Dbxref=GenBank:WP_000861591.1;Name=WP_000861591.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=CCO34_RS07780;product=malate dehydrogenase;protein_id=WP_000861591.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 40762 41391 . + . ID=gene-CCO34_RS07785;Name=CCO34_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07785;old_locus_tag=CCO34_07780 NZ_NPMD01000003.1 Protein Homology CDS 40762 41391 . + 0 ID=cds-WP_000723777.1;Parent=gene-CCO34_RS07785;Dbxref=GenBank:WP_000723777.1;Name=WP_000723777.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=CCO34_RS07785;product=GntR family transcriptional regulator;protein_id=WP_000723777.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 41378 42043 . + . ID=gene-CCO34_RS07790;Name=CCO34_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07790;old_locus_tag=CCO34_07785 NZ_NPMD01000003.1 Protein Homology CDS 41378 42043 . + 0 ID=cds-WP_001171581.1;Parent=gene-CCO34_RS07790;Dbxref=GenBank:WP_001171581.1;Name=WP_001171581.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=CCO34_RS07790;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 42254 43522 . + . ID=gene-CCO34_RS07795;Name=CCO34_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07795;old_locus_tag=CCO34_07790 NZ_NPMD01000003.1 Protein Homology CDS 42254 43522 . + 0 ID=cds-WP_000433390.1;Parent=gene-CCO34_RS07795;Dbxref=GenBank:WP_000433390.1;Name=WP_000433390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=CCO34_RS07795;product=SLC13 family permease;protein_id=WP_000433390.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 43555 44454 . + . ID=gene-CCO34_RS07800;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=CCO34_RS07800;old_locus_tag=CCO34_07795 NZ_NPMD01000003.1 Protein Homology CDS 43555 44454 . + 0 ID=cds-WP_000045349.1;Parent=gene-CCO34_RS07800;Dbxref=GenBank:WP_000045349.1;Name=WP_000045349.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=CCO34_RS07800;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 44454 45071 . + . ID=gene-CCO34_RS07805;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=CCO34_RS07805;old_locus_tag=CCO34_07800 NZ_NPMD01000003.1 Protein Homology CDS 44454 45071 . + 0 ID=cds-WP_000162405.1;Parent=gene-CCO34_RS07805;Dbxref=GenBank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=CCO34_RS07805;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 45228 45470 . + . ID=gene-CCO34_RS07810;Name=CCO34_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07810;old_locus_tag=CCO34_07805 NZ_NPMD01000003.1 Protein Homology CDS 45228 45470 . + 0 ID=cds-WP_000180119.1;Parent=gene-CCO34_RS07810;Dbxref=GenBank:WP_000180119.1;Name=WP_000180119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128597.1;locus_tag=CCO34_RS07810;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_000180119.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 45487 47256 . + . ID=gene-CCO34_RS07815;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO34_RS07815;old_locus_tag=CCO34_07810 NZ_NPMD01000003.1 Protein Homology CDS 45487 47256 . + 0 ID=cds-WP_000150447.1;Parent=gene-CCO34_RS07815;Dbxref=GenBank:WP_000150447.1;Name=WP_000150447.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO34_RS07815;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_000150447.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 47269 48570 . + . ID=gene-CCO34_RS07820;Name=CCO34_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07820;old_locus_tag=CCO34_07815 NZ_NPMD01000003.1 Protein Homology CDS 47269 48570 . + 0 ID=cds-WP_000444849.1;Parent=gene-CCO34_RS07820;Dbxref=GenBank:WP_000444849.1;Name=WP_000444849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO34_RS07820;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444849.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 48590 49321 . + . ID=gene-CCO34_RS07825;Name=CCO34_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07825;old_locus_tag=CCO34_07820 NZ_NPMD01000003.1 Protein Homology CDS 48590 49321 . + 0 ID=cds-WP_000602035.1;Parent=gene-CCO34_RS07825;Dbxref=GenBank:WP_000602035.1;Name=WP_000602035.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=CCO34_RS07825;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_000602035.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 49355 50425 . - . ID=gene-CCO34_RS07830;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=CCO34_RS07830;old_locus_tag=CCO34_07825 NZ_NPMD01000003.1 Protein Homology CDS 49355 50425 . - 0 ID=cds-WP_000497705.1;Parent=gene-CCO34_RS07830;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=CCO34_RS07830;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 50518 51885 . - . ID=gene-CCO34_RS07835;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=CCO34_RS07835;old_locus_tag=CCO34_07830 NZ_NPMD01000003.1 Protein Homology CDS 50518 51885 . - 0 ID=cds-WP_000716690.1;Parent=gene-CCO34_RS07835;Dbxref=GenBank:WP_000716690.1;Name=WP_000716690.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=CCO34_RS07835;product=serine endoprotease DegQ;protein_id=WP_000716690.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 52042 52440 . - . ID=gene-CCO34_RS07840;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=CCO34_RS07840;old_locus_tag=CCO34_07835 NZ_NPMD01000003.1 Protein Homology CDS 52042 52440 . - 0 ID=cds-WP_001519074.1;Parent=gene-CCO34_RS07840;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=CCO34_RS07840;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 52633 53757 . + . ID=gene-CCO34_RS07845;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=CCO34_RS07845;old_locus_tag=CCO34_07840 NZ_NPMD01000003.1 Protein Homology CDS 52633 53757 . + 0 ID=cds-WP_001191219.1;Parent=gene-CCO34_RS07845;Dbxref=GenBank:WP_001191219.1;Name=WP_001191219.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=CCO34_RS07845;product=cell division protein ZapE;protein_id=WP_001191219.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 54059 54487 . + . ID=gene-CCO34_RS07850;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CCO34_RS07850;old_locus_tag=CCO34_07845 NZ_NPMD01000003.1 Protein Homology CDS 54059 54487 . + 0 ID=cds-WP_000847559.1;Parent=gene-CCO34_RS07850;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=CCO34_RS07850;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 54503 54895 . + . ID=gene-CCO34_RS07855;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CCO34_RS07855;old_locus_tag=CCO34_07850 NZ_NPMD01000003.1 Protein Homology CDS 54503 54895 . + 0 ID=cds-WP_000829815.1;Parent=gene-CCO34_RS07855;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=CCO34_RS07855;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 55095 55847 . + . ID=gene-CCO34_RS07860;Name=CCO34_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07860;old_locus_tag=CCO34_07855 NZ_NPMD01000003.1 Protein Homology CDS 55095 55847 . + 0 ID=cds-WP_000950539.1;Parent=gene-CCO34_RS07860;Dbxref=GenBank:WP_000950539.1;Name=WP_000950539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=CCO34_RS07860;product=DUF695 domain-containing protein;protein_id=WP_000950539.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 56110 56748 . + . ID=gene-CCO34_RS07865;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=CCO34_RS07865;old_locus_tag=CCO34_07860 NZ_NPMD01000003.1 Protein Homology CDS 56110 56748 . + 0 ID=cds-WP_000257298.1;Parent=gene-CCO34_RS07865;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=CCO34_RS07865;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 56754 57254 . + . ID=gene-CCO34_RS07870;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=CCO34_RS07870;old_locus_tag=CCO34_07865 NZ_NPMD01000003.1 Protein Homology CDS 56754 57254 . + 0 ID=cds-WP_000366112.1;Parent=gene-CCO34_RS07870;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=CCO34_RS07870;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 57363 58154 . + . ID=gene-CCO34_RS07875;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=CCO34_RS07875;old_locus_tag=CCO34_07870 NZ_NPMD01000003.1 Protein Homology CDS 57363 58154 . + 0 ID=cds-WP_000382926.1;Parent=gene-CCO34_RS07875;Dbxref=GenBank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=CCO34_RS07875;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 58289 59182 . + . ID=gene-CCO34_RS07880;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=CCO34_RS07880;old_locus_tag=CCO34_07875 NZ_NPMD01000003.1 Protein Homology CDS 58289 59182 . + 0 ID=cds-WP_001029665.1;Parent=gene-CCO34_RS07880;Dbxref=GenBank:WP_001029665.1;Name=WP_001029665.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=CCO34_RS07880;product=N-acetylneuraminate lyase;protein_id=WP_001029665.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 59298 60788 . + . ID=gene-CCO34_RS07885;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=CCO34_RS07885;old_locus_tag=CCO34_07880 NZ_NPMD01000003.1 Protein Homology CDS 59298 60788 . + 0 ID=cds-WP_000108071.1;Parent=gene-CCO34_RS07885;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=CCO34_RS07885;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 60835 61524 . + . ID=gene-CCO34_RS07890;Name=CCO34_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07890;old_locus_tag=CCO34_07885 NZ_NPMD01000003.1 Protein Homology CDS 60835 61524 . + 0 ID=cds-WP_000054441.1;Parent=gene-CCO34_RS07890;Dbxref=GenBank:WP_000054441.1;Name=WP_000054441.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=CCO34_RS07890;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054441.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 61521 62396 . + . ID=gene-CCO34_RS07895;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=CCO34_RS07895;old_locus_tag=CCO34_07890 NZ_NPMD01000003.1 Protein Homology CDS 61521 62396 . + 0 ID=cds-WP_000208969.1;Parent=gene-CCO34_RS07895;Dbxref=GenBank:WP_000208969.1;Name=WP_000208969.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=CCO34_RS07895;product=N-acetylmannosamine kinase;protein_id=WP_000208969.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 62393 62860 . + . ID=gene-CCO34_RS07900;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=CCO34_RS07900;old_locus_tag=CCO34_07895 NZ_NPMD01000003.1 Protein Homology CDS 62393 62860 . + 0 ID=cds-WP_000979902.1;Parent=gene-CCO34_RS07900;Dbxref=GenBank:WP_000979902.1;Name=WP_000979902.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=CCO34_RS07900;product=N-acetylneuraminate anomerase;protein_id=WP_000979902.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 62943 64223 . - . ID=gene-CCO34_RS07905;Name=CCO34_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07905;old_locus_tag=CCO34_07900 NZ_NPMD01000003.1 Protein Homology CDS 62943 64223 . - 0 ID=cds-WP_001180674.1;Parent=gene-CCO34_RS07905;Dbxref=GenBank:WP_001180674.1;Name=WP_001180674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=CCO34_RS07905;product=cytosine deaminase;protein_id=WP_001180674.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 64210 65463 . - . ID=gene-CCO34_RS07910;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=CCO34_RS07910;old_locus_tag=CCO34_07905 NZ_NPMD01000003.1 Protein Homology CDS 64210 65463 . - 0 ID=cds-WP_000076257.1;Parent=gene-CCO34_RS07910;Dbxref=GenBank:WP_000076257.1;Name=WP_000076257.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=CCO34_RS07910;product=cytosine permease;protein_id=WP_000076257.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 65579 66682 . - . ID=gene-CCO34_RS07915;Name=CCO34_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07915;old_locus_tag=CCO34_07910 NZ_NPMD01000003.1 Protein Homology CDS 65579 66682 . - 0 ID=cds-WP_000184311.1;Parent=gene-CCO34_RS07915;Dbxref=GenBank:WP_000184311.1;Name=WP_000184311.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=CCO34_RS07915;product=PDDEXK nuclease domain-containing protein;protein_id=WP_000184311.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 66889 68307 . - . ID=gene-CCO34_RS07920;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=CCO34_RS07920;old_locus_tag=CCO34_07915 NZ_NPMD01000003.1 Protein Homology CDS 66889 68307 . - 0 ID=cds-WP_000081635.1;Parent=gene-CCO34_RS07920;Dbxref=GenBank:WP_000081635.1;Name=WP_000081635.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=CCO34_RS07920;product=glutamate synthase subunit GltD;protein_id=WP_000081635.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 68317 72777 . - . ID=gene-CCO34_RS07925;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CCO34_RS07925;old_locus_tag=CCO34_07920 NZ_NPMD01000003.1 Protein Homology CDS 68317 72777 . - 0 ID=cds-WP_000965024.1;Parent=gene-CCO34_RS07925;Dbxref=GenBank:WP_000965024.1;Name=WP_000965024.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=CCO34_RS07925;product=glutamate synthase large subunit;protein_id=WP_000965024.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 73449 74378 . + . ID=gene-CCO34_RS07935;Name=CCO34_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS07935;old_locus_tag=CCO34_07930 NZ_NPMD01000003.1 Protein Homology CDS 73449 74378 . + 0 ID=cds-WP_001176883.1;Parent=gene-CCO34_RS07935;Dbxref=GenBank:WP_001176883.1;Name=WP_001176883.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=CCO34_RS07935;product=TIGR01212 family radical SAM protein;protein_id=WP_001176883.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 74472 76808 . + . ID=gene-CCO34_RS07940;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=CCO34_RS07940;old_locus_tag=CCO34_07935 NZ_NPMD01000003.1 Protein Homology CDS 74472 76808 . + 0 ID=cds-WP_000809813.1;Parent=gene-CCO34_RS07940;Dbxref=GenBank:WP_000809813.1;Name=WP_000809813.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=CCO34_RS07940;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809813.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 77035 77688 . + . ID=gene-CCO34_RS07945;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=CCO34_RS07945;old_locus_tag=CCO34_07940 NZ_NPMD01000003.1 Protein Homology CDS 77035 77688 . + 0 ID=cds-WP_000719811.1;Parent=gene-CCO34_RS07945;Dbxref=GenBank:WP_000719811.1;Name=WP_000719811.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=CCO34_RS07945;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719811.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 77685 78413 . + . ID=gene-CCO34_RS07950;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=CCO34_RS07950;old_locus_tag=CCO34_07945 NZ_NPMD01000003.1 Protein Homology CDS 77685 78413 . + 0 ID=cds-WP_000044653.1;Parent=gene-CCO34_RS07950;Dbxref=GenBank:WP_000044653.1;Name=WP_000044653.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=CCO34_RS07950;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044653.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 78488 79120 . - . ID=gene-CCO34_RS07955;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=CCO34_RS07955;old_locus_tag=CCO34_07950 NZ_NPMD01000003.1 Protein Homology CDS 78488 79120 . - 0 ID=cds-WP_000602196.1;Parent=gene-CCO34_RS07955;Dbxref=GenBank:WP_000602196.1;Name=WP_000602196.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=CCO34_RS07955;product=PhoP regulatory network protein YrbL;protein_id=WP_000602196.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 79369 79641 . - . ID=gene-CCO34_RS07965;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=CCO34_RS07965;old_locus_tag=CCO34_07960 NZ_NPMD01000003.1 Protein Homology CDS 79369 79641 . - 0 ID=cds-WP_000216797.1;Parent=gene-CCO34_RS07965;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=CCO34_RS07965;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 79638 80492 . - . ID=gene-CCO34_RS07970;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CCO34_RS07970;old_locus_tag=CCO34_07965 NZ_NPMD01000003.1 Protein Homology CDS 79638 80492 . - 0 ID=cds-WP_000243749.1;Parent=gene-CCO34_RS07970;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=CCO34_RS07970;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 80538 81029 . - . ID=gene-CCO34_RS07975;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=CCO34_RS07975;old_locus_tag=CCO34_07970 NZ_NPMD01000003.1 Protein Homology CDS 80538 81029 . - 0 ID=cds-WP_000609332.1;Parent=gene-CCO34_RS07975;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=CCO34_RS07975;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 81147 81434 . - . ID=gene-CCO34_RS07980;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CCO34_RS07980;old_locus_tag=CCO34_07975 NZ_NPMD01000003.1 Protein Homology CDS 81147 81434 . - 0 ID=cds-WP_001176589.1;Parent=gene-CCO34_RS07980;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=CCO34_RS07980;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 81457 82890 . - . ID=gene-CCO34_RS07985;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=CCO34_RS07985;old_locus_tag=CCO34_07980 NZ_NPMD01000003.1 Protein Homology CDS 81457 82890 . - 0 ID=cds-WP_000809020.1;Parent=gene-CCO34_RS07985;Dbxref=GenBank:WP_000809020.1;Name=WP_000809020.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=CCO34_RS07985;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 82938 83663 . - . ID=gene-CCO34_RS07990;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=CCO34_RS07990;old_locus_tag=CCO34_07985 NZ_NPMD01000003.1 Protein Homology CDS 82938 83663 . - 0 ID=cds-WP_000224104.1;Parent=gene-CCO34_RS07990;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=CCO34_RS07990;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 83670 84224 . - . ID=gene-CCO34_RS07995;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=CCO34_RS07995;old_locus_tag=CCO34_07990 NZ_NPMD01000003.1 Protein Homology CDS 83670 84224 . - 0 ID=cds-WP_000669770.1;Parent=gene-CCO34_RS07995;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=CCO34_RS07995;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 84193 84768 . - . ID=gene-CCO34_RS08000;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=CCO34_RS08000;old_locus_tag=CCO34_07995 NZ_NPMD01000003.1 Protein Homology CDS 84193 84768 . - 0 ID=cds-WP_000047845.1;Parent=gene-CCO34_RS08000;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=CCO34_RS08000;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 84765 85331 . - . ID=gene-CCO34_RS08005;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=CCO34_RS08005;old_locus_tag=CCO34_08000 NZ_NPMD01000003.1 Protein Homology CDS 84765 85331 . - 0 ID=cds-WP_000030029.1;Parent=gene-CCO34_RS08005;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=CCO34_RS08005;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 85352 86338 . - . ID=gene-CCO34_RS08010;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=CCO34_RS08010;old_locus_tag=CCO34_08005 NZ_NPMD01000003.1 Protein Homology CDS 85352 86338 . - 0 ID=cds-WP_000018617.1;Parent=gene-CCO34_RS08010;Dbxref=GenBank:WP_000018617.1;Name=WP_000018617.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=CCO34_RS08010;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018617.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 86352 87329 . - . ID=gene-CCO34_RS08015;Name=CCO34_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08015;old_locus_tag=CCO34_08010 NZ_NPMD01000003.1 Protein Homology CDS 86352 87329 . - 0 ID=cds-WP_000922736.1;Parent=gene-CCO34_RS08015;Dbxref=GenBank:WP_000922736.1;Name=WP_000922736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=CCO34_RS08015;product=calcium/sodium antiporter;protein_id=WP_000922736.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 87542 88354 . + . ID=gene-CCO34_RS08020;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=CCO34_RS08020;old_locus_tag=CCO34_08015 NZ_NPMD01000003.1 Protein Homology CDS 87542 88354 . + 0 ID=cds-WP_000531566.1;Parent=gene-CCO34_RS08020;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=CCO34_RS08020;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 88362 89144 . + . ID=gene-CCO34_RS08025;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=CCO34_RS08025;old_locus_tag=CCO34_08020 NZ_NPMD01000003.1 Protein Homology CDS 88362 89144 . + 0 ID=cds-WP_000925786.1;Parent=gene-CCO34_RS08025;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=CCO34_RS08025;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 89149 89700 . + . ID=gene-CCO34_RS08030;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=CCO34_RS08030;old_locus_tag=CCO34_08025 NZ_NPMD01000003.1 Protein Homology CDS 89149 89700 . + 0 ID=cds-WP_001193591.1;Parent=gene-CCO34_RS08030;Dbxref=GenBank:WP_001193591.1;Name=WP_001193591.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=CCO34_RS08030;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193591.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 89719 90354 . + . ID=gene-CCO34_RS08035;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=CCO34_RS08035;old_locus_tag=CCO34_08030 NZ_NPMD01000003.1 Protein Homology CDS 89719 90354 . + 0 ID=cds-WP_000476475.1;Parent=gene-CCO34_RS08035;Dbxref=GenBank:WP_000476475.1;Name=WP_000476475.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=CCO34_RS08035;product=phospholipid-binding protein MlaC;protein_id=WP_000476475.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 90354 90650 . + . ID=gene-CCO34_RS08040;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=CCO34_RS08040;old_locus_tag=CCO34_08035 NZ_NPMD01000003.1 Protein Homology CDS 90354 90650 . + 0 ID=cds-WP_000188843.1;Parent=gene-CCO34_RS08040;Dbxref=GenBank:WP_000188843.1;Name=WP_000188843.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=CCO34_RS08040;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188843.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 90838 91092 . + . ID=gene-CCO34_RS08045;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=CCO34_RS08045;old_locus_tag=CCO34_08040 NZ_NPMD01000003.1 Protein Homology CDS 90838 91092 . + 0 ID=cds-WP_023228605.1;Parent=gene-CCO34_RS08045;Dbxref=GenBank:WP_023228605.1;Name=WP_023228605.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=CCO34_RS08045;product=BolA family iron metabolism protein IbaG;protein_id=WP_023228605.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 91146 92405 . + . ID=gene-CCO34_RS08050;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CCO34_RS08050;old_locus_tag=CCO34_08045 NZ_NPMD01000003.1 Protein Homology CDS 91146 92405 . + 0 ID=cds-WP_000357288.1;Parent=gene-CCO34_RS08050;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=CCO34_RS08050;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 92464 92751 . - . ID=gene-CCO34_RS08055;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=CCO34_RS08055;old_locus_tag=CCO34_08050 NZ_NPMD01000003.1 Protein Homology CDS 92464 92751 . - 0 ID=cds-WP_000444167.1;Parent=gene-CCO34_RS08055;Dbxref=GenBank:WP_000444167.1;Name=WP_000444167.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=CCO34_RS08055;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444167.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 92983 93954 . - . ID=gene-CCO34_RS08060;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=CCO34_RS08060;old_locus_tag=CCO34_08055 NZ_NPMD01000003.1 Protein Homology CDS 92983 93954 . - 0 ID=cds-WP_001047354.1;Parent=gene-CCO34_RS08060;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=CCO34_RS08060;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 94212 94523 . + . ID=gene-CCO34_RS08065;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CCO34_RS08065;old_locus_tag=CCO34_08060 NZ_NPMD01000003.1 Protein Homology CDS 94212 94523 . + 0 ID=cds-WP_000271396.1;Parent=gene-CCO34_RS08065;Dbxref=GenBank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=CCO34_RS08065;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 94543 94800 . + . ID=gene-CCO34_RS08070;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CCO34_RS08070;old_locus_tag=CCO34_08065 NZ_NPMD01000003.1 Protein Homology CDS 94543 94800 . + 0 ID=cds-WP_000940593.1;Parent=gene-CCO34_RS08070;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=CCO34_RS08070;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 94930 95895 . + . ID=gene-CCO34_RS08075;Name=CCO34_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08075;old_locus_tag=CCO34_08070 NZ_NPMD01000003.1 Protein Homology CDS 94930 95895 . + 0 ID=cds-WP_000813052.1;Parent=gene-CCO34_RS08075;Dbxref=GenBank:WP_000813052.1;Name=WP_000813052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=CCO34_RS08075;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 95911 97083 . + . ID=gene-CCO34_RS08080;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=CCO34_RS08080;old_locus_tag=CCO34_08075 NZ_NPMD01000003.1 Protein Homology CDS 95911 97083 . + 0 ID=cds-WP_000673556.1;Parent=gene-CCO34_RS08080;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=CCO34_RS08080;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 97214 98647 . - . ID=gene-CCO34_RS08085;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=CCO34_RS08085;old_locus_tag=CCO34_08080 NZ_NPMD01000003.1 Protein Homology CDS 97214 98647 . - 0 ID=cds-WP_001212675.1;Parent=gene-CCO34_RS08085;Dbxref=GenBank:WP_001212675.1;Name=WP_001212675.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=CCO34_RS08085;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212675.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 98895 99371 . + . ID=gene-CCO34_RS08090;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CCO34_RS08090;old_locus_tag=CCO34_08085 NZ_NPMD01000003.1 Protein Homology CDS 98895 99371 . + 0 ID=cds-WP_001148008.1;Parent=gene-CCO34_RS08090;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=CCO34_RS08090;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 99527 99820 . - . ID=gene-CCO34_RS08095;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CCO34_RS08095;old_locus_tag=CCO34_08090 NZ_NPMD01000003.1 Protein Homology CDS 99527 99820 . - 0 ID=cds-WP_001592995.1;Parent=gene-CCO34_RS08095;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=CCO34_RS08095;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 99947 100573 . + . ID=gene-CCO34_RS08100;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=CCO34_RS08100;old_locus_tag=CCO34_08095 NZ_NPMD01000003.1 Protein Homology CDS 99947 100573 . + 0 ID=cds-WP_000145974.1;Parent=gene-CCO34_RS08100;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=CCO34_RS08100;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 100677 102611 . + . ID=gene-CCO34_RS08110;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=CCO34_RS08110;old_locus_tag=CCO34_08105 NZ_NPMD01000003.1 Protein Homology CDS 100677 102611 . + 0 ID=cds-WP_001107480.1;Parent=gene-CCO34_RS08110;Dbxref=GenBank:WP_001107480.1;Name=WP_001107480.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=CCO34_RS08110;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107480.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 102716 103564 . + . ID=gene-CCO34_RS08115;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CCO34_RS08115;old_locus_tag=CCO34_08110 NZ_NPMD01000003.1 Protein Homology CDS 102716 103564 . + 0 ID=cds-WP_000764711.1;Parent=gene-CCO34_RS08115;Dbxref=GenBank:WP_000764711.1;Name=WP_000764711.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=CCO34_RS08115;product=dihydropteroate synthase;protein_id=WP_000764711.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 103557 104894 . + . ID=gene-CCO34_RS08120;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CCO34_RS08120;old_locus_tag=CCO34_08115 NZ_NPMD01000003.1 Protein Homology CDS 103557 104894 . + 0 ID=cds-WP_000071169.1;Parent=gene-CCO34_RS08120;Dbxref=GenBank:WP_000071169.1;Name=WP_000071169.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=CCO34_RS08120;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 105117 105449 . + . ID=gene-CCO34_RS08125;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CCO34_RS08125;old_locus_tag=CCO34_08120 NZ_NPMD01000003.1 Protein Homology CDS 105117 105449 . + 0 ID=cds-WP_000272680.1;Parent=gene-CCO34_RS08125;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=CCO34_RS08125;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 105463 105549 . + . ID=gene-CCO34_RS08130;Name=CCO34_RS08130;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS08130;old_locus_tag=CCO34_08125 NZ_NPMD01000003.1 tRNAscan-SE tRNA 105463 105549 . + . ID=rna-CCO34_RS08130;Parent=gene-CCO34_RS08130;anticodon=(pos:105497..105499);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS08130;product=tRNA-Leu NZ_NPMD01000003.1 tRNAscan-SE exon 105463 105549 . + . ID=exon-CCO34_RS08130-1;Parent=rna-CCO34_RS08130;anticodon=(pos:105497..105499);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS08130;product=tRNA-Leu NZ_NPMD01000003.1 RefSeq gene 105885 106949 . + . ID=gene-CCO34_RS08135;Name=CCO34_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08135;old_locus_tag=CCO34_08130 NZ_NPMD01000003.1 Protein Homology CDS 105885 106949 . + 0 ID=cds-WP_000051504.1;Parent=gene-CCO34_RS08135;Dbxref=GenBank:WP_000051504.1;Name=WP_000051504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462203.1;locus_tag=CCO34_RS08135;product=DUF1963 domain-containing protein;protein_id=WP_000051504.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 107030 108373 . - . ID=gene-CCO34_RS08140;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=CCO34_RS08140;old_locus_tag=CCO34_08135 NZ_NPMD01000003.1 Protein Homology CDS 107030 108373 . - 0 ID=cds-WP_000207653.1;Parent=gene-CCO34_RS08140;Dbxref=GenBank:WP_000207653.1;Name=WP_000207653.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=CCO34_RS08140;product=argininosuccinate synthase;protein_id=WP_000207653.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 108717 108793 . + . ID=gene-CCO34_RS08145;Name=CCO34_RS08145;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS08145;old_locus_tag=CCO34_08140 NZ_NPMD01000003.1 tRNAscan-SE tRNA 108717 108793 . + . ID=rna-CCO34_RS08145;Parent=gene-CCO34_RS08145;anticodon=(pos:108751..108753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS08145;product=tRNA-Met NZ_NPMD01000003.1 tRNAscan-SE exon 108717 108793 . + . ID=exon-CCO34_RS08145-1;Parent=rna-CCO34_RS08145;anticodon=(pos:108751..108753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS08145;product=tRNA-Met NZ_NPMD01000003.1 RefSeq gene 109001 109453 . + . ID=gene-CCO34_RS08150;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CCO34_RS08150;old_locus_tag=CCO34_08145 NZ_NPMD01000003.1 Protein Homology CDS 109001 109453 . + 0 ID=cds-WP_000105461.1;Parent=gene-CCO34_RS08150;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=CCO34_RS08150;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 109481 110983 . + . ID=gene-CCO34_RS08155;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CCO34_RS08155;old_locus_tag=CCO34_08150 NZ_NPMD01000003.1 Protein Homology CDS 109481 110983 . + 0 ID=cds-WP_001031038.1;Parent=gene-CCO34_RS08155;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=CCO34_RS08155;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 111008 113686 . + . ID=gene-CCO34_RS08160;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CCO34_RS08160;old_locus_tag=CCO34_08155 NZ_NPMD01000003.1 Protein Homology CDS 111008 113686 . + 0 ID=cds-WP_000133064.1;Parent=gene-CCO34_RS08160;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=CCO34_RS08160;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 113907 114308 . + . ID=gene-CCO34_RS08165;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CCO34_RS08165;old_locus_tag=CCO34_08160 NZ_NPMD01000003.1 Protein Homology CDS 113907 114308 . + 0 ID=cds-WP_001040200.1;Parent=gene-CCO34_RS08165;Dbxref=GenBank:WP_001040200.1;Name=WP_001040200.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=CCO34_RS08165;product=30S ribosome-binding factor RbfA;protein_id=WP_001040200.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 114308 115252 . + . ID=gene-CCO34_RS08170;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CCO34_RS08170;old_locus_tag=CCO34_08165 NZ_NPMD01000003.1 Protein Homology CDS 114308 115252 . + 0 ID=cds-WP_000089668.1;Parent=gene-CCO34_RS08170;Dbxref=GenBank:WP_000089668.1;Name=WP_000089668.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=CCO34_RS08170;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089668.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 115403 115672 . + . ID=gene-CCO34_RS08175;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CCO34_RS08175;old_locus_tag=CCO34_08170 NZ_NPMD01000003.1 Protein Homology CDS 115403 115672 . + 0 ID=cds-WP_000059465.1;Parent=gene-CCO34_RS08175;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=CCO34_RS08175;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 115914 118049 . + . ID=gene-CCO34_RS08180;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CCO34_RS08180;old_locus_tag=CCO34_08175 NZ_NPMD01000003.1 Protein Homology CDS 115914 118049 . + 0 ID=cds-WP_001670767.1;Parent=gene-CCO34_RS08180;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=CCO34_RS08180;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 118159 119043 . + . ID=gene-CCO34_RS08185;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=CCO34_RS08185;old_locus_tag=CCO34_08180 NZ_NPMD01000003.1 Protein Homology CDS 118159 119043 . + 0 ID=cds-WP_000802069.1;Parent=gene-CCO34_RS08185;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=CCO34_RS08185;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 119149 119229 . + . ID=gene-CCO34_RS25280;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=CCO34_RS25280 NZ_NPMD01000003.1 Protein Homology CDS 119149 119229 . + 0 ID=cds-WP_010723222.1;Parent=gene-CCO34_RS25280;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=CCO34_RS25280;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 119222 121111 . + . ID=gene-CCO34_RS08190;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=CCO34_RS08190;old_locus_tag=CCO34_08185 NZ_NPMD01000003.1 Protein Homology CDS 119222 121111 . + 0 ID=cds-WP_000807248.1;Parent=gene-CCO34_RS08190;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=CCO34_RS08190;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 121265 122509 . + . ID=gene-CCO34_RS08195;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=CCO34_RS08195;old_locus_tag=CCO34_08190 NZ_NPMD01000003.1 Protein Homology CDS 121265 122509 . + 0 ID=cds-WP_000224386.1;Parent=gene-CCO34_RS08195;Dbxref=GenBank:WP_000224386.1;Name=WP_000224386.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=CCO34_RS08195;product=tryptophan permease;protein_id=WP_000224386.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 122570 123100 . - . ID=gene-CCO34_RS08200;Name=CCO34_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08200;old_locus_tag=CCO34_08195 NZ_NPMD01000003.1 Protein Homology CDS 122570 123100 . - 0 ID=cds-WP_001294027.1;Parent=gene-CCO34_RS08200;Dbxref=GenBank:WP_001294027.1;Name=WP_001294027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462191.1;locus_tag=CCO34_RS08200;product=hypothetical protein;protein_id=WP_001294027.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 123259 123978 . + . ID=gene-CCO34_RS08205;Name=CCO34_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08205;old_locus_tag=CCO34_08200 NZ_NPMD01000003.1 Protein Homology CDS 123259 123978 . + 0 ID=cds-WP_000532745.1;Parent=gene-CCO34_RS08205;Dbxref=GenBank:WP_000532745.1;Name=WP_000532745.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462190.1;locus_tag=CCO34_RS08205;product=L%2CD-transpeptidase family protein;protein_id=WP_000532745.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 123956 124963 . - . ID=gene-CCO34_RS08210;Name=CCO34_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08210;old_locus_tag=CCO34_08205 NZ_NPMD01000003.1 Protein Homology CDS 123956 124963 . - 0 ID=cds-WP_000130437.1;Parent=gene-CCO34_RS08210;Dbxref=GenBank:WP_000130437.1;Name=WP_000130437.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=CCO34_RS08210;product=luciferase-like monooxygenase;protein_id=WP_000130437.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 125141 126019 . - . ID=gene-CCO34_RS08215;Name=CCO34_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08215;old_locus_tag=CCO34_08210 NZ_NPMD01000003.1 Protein Homology CDS 125141 126019 . - 0 ID=cds-WP_000877721.1;Parent=gene-CCO34_RS08215;Dbxref=GenBank:WP_000877721.1;Name=WP_000877721.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=CCO34_RS08215;product=U32 family peptidase;protein_id=WP_000877721.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 126028 127023 . - . ID=gene-CCO34_RS08220;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=CCO34_RS08220;old_locus_tag=CCO34_08215 NZ_NPMD01000003.1 Protein Homology CDS 126028 127023 . - 0 ID=cds-WP_000421309.1;Parent=gene-CCO34_RS08220;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=CCO34_RS08220;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 127240 127764 . + . ID=gene-CCO34_RS08225;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=CCO34_RS08225;old_locus_tag=CCO34_08220 NZ_NPMD01000003.1 Protein Homology CDS 127240 127764 . + 0 ID=cds-WP_000884721.1;Parent=gene-CCO34_RS08225;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=CCO34_RS08225;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 127758 128261 . + . ID=gene-CCO34_RS08230;Name=CCO34_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08230;old_locus_tag=CCO34_08225 NZ_NPMD01000003.1 Protein Homology CDS 127758 128261 . + 0 ID=cds-WP_000908562.1;Parent=gene-CCO34_RS08230;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=CCO34_RS08230;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 128248 128565 . - . ID=gene-CCO34_RS08235;Name=CCO34_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08235;old_locus_tag=CCO34_08230 NZ_NPMD01000003.1 Protein Homology CDS 128248 128565 . - 0 ID=cds-WP_000928379.1;Parent=gene-CCO34_RS08235;Dbxref=GenBank:WP_000928379.1;Name=WP_000928379.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=CCO34_RS08235;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 128603 129046 . + . ID=gene-CCO34_RS08240;Name=CCO34_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08240;old_locus_tag=CCO34_08235 NZ_NPMD01000003.1 Protein Homology CDS 128603 129046 . + 0 ID=cds-WP_000380404.1;Parent=gene-CCO34_RS08240;Dbxref=GenBank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=CCO34_RS08240;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 129026 129544 . - . ID=gene-CCO34_RS08245;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=CCO34_RS08245;old_locus_tag=CCO34_08240 NZ_NPMD01000003.1 Protein Homology CDS 129026 129544 . - 0 ID=cds-WP_000037599.1;Parent=gene-CCO34_RS08245;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=CCO34_RS08245;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 129675 130310 . + . ID=gene-CCO34_RS08250;Name=CCO34_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08250;old_locus_tag=CCO34_08245 NZ_NPMD01000003.1 Protein Homology CDS 129675 130310 . + 0 ID=cds-WP_001521094.1;Parent=gene-CCO34_RS08250;Dbxref=GenBank:WP_001521094.1;Name=WP_001521094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=CCO34_RS08250;product=NAD(P)H-binding protein;protein_id=WP_001521094.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 130377 130952 . - . ID=gene-CCO34_RS08255;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=CCO34_RS08255;old_locus_tag=CCO34_08250 NZ_NPMD01000003.1 Protein Homology CDS 130377 130952 . - 0 ID=cds-WP_000643280.1;Parent=gene-CCO34_RS08255;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=CCO34_RS08255;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 130962 131552 . - . ID=gene-CCO34_RS08260;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=CCO34_RS08260;old_locus_tag=CCO34_08255 NZ_NPMD01000003.1 Protein Homology CDS 130962 131552 . - 0 ID=cds-WP_000893481.1;Parent=gene-CCO34_RS08260;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=CCO34_RS08260;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 131574 131969 . - . ID=gene-CCO34_RS08265;Name=CCO34_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08265;old_locus_tag=CCO34_08260 NZ_NPMD01000003.1 Protein Homology CDS 131574 131969 . - 0 ID=cds-WP_000057285.1;Parent=gene-CCO34_RS08265;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=CCO34_RS08265;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 131927 133969 . - . ID=gene-CCO34_RS08270;Name=CCO34_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08270;old_locus_tag=CCO34_08265 NZ_NPMD01000003.1 Protein Homology CDS 131927 133969 . - 0 ID=cds-WP_000249229.1;Parent=gene-CCO34_RS08270;Dbxref=GenBank:WP_000249229.1;Name=WP_000249229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=CCO34_RS08270;product=penicillin-binding protein activator;protein_id=WP_000249229.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 134033 134896 . + . ID=gene-CCO34_RS08275;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CCO34_RS08275;old_locus_tag=CCO34_08270 NZ_NPMD01000003.1 Protein Homology CDS 134033 134896 . + 0 ID=cds-WP_000812288.1;Parent=gene-CCO34_RS08275;Dbxref=GenBank:WP_000812288.1;Name=WP_000812288.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=CCO34_RS08275;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812288.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 135054 135827 . - . ID=gene-CCO34_RS08280;Name=CCO34_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08280;old_locus_tag=CCO34_08275 NZ_NPMD01000003.1 Protein Homology CDS 135054 135827 . - 0 ID=cds-WP_001083899.1;Parent=gene-CCO34_RS08280;Dbxref=GenBank:WP_001083899.1;Name=WP_001083899.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=CCO34_RS08280;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083899.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 135938 136981 . - . ID=gene-CCO34_RS08285;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CCO34_RS08285;old_locus_tag=CCO34_08280 NZ_NPMD01000003.1 Protein Homology CDS 135938 136981 . - 0 ID=cds-WP_000844187.1;Parent=gene-CCO34_RS08285;Dbxref=GenBank:WP_000844187.1;Name=WP_000844187.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=CCO34_RS08285;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844187.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 137025 138398 . - . ID=gene-CCO34_RS08290;Name=CCO34_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08290;old_locus_tag=CCO34_08285 NZ_NPMD01000003.1 Protein Homology CDS 137025 138398 . - 0 ID=cds-WP_000490601.1;Parent=gene-CCO34_RS08290;Dbxref=GenBank:WP_000490601.1;Name=WP_000490601.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=CCO34_RS08290;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490601.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 138402 138686 . - . ID=gene-CCO34_RS08295;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CCO34_RS08295;old_locus_tag=CCO34_08290 NZ_NPMD01000003.1 Protein Homology CDS 138402 138686 . - 0 ID=cds-WP_000824294.1;Parent=gene-CCO34_RS08295;Dbxref=GenBank:WP_000824294.1;Name=WP_000824294.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=CCO34_RS08295;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824294.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 138717 139181 . - . ID=gene-CCO34_RS08300;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CCO34_RS08300;old_locus_tag=CCO34_08295 NZ_NPMD01000003.1 Protein Homology CDS 138717 139181 . - 0 ID=cds-WP_000080445.1;Parent=gene-CCO34_RS08300;Dbxref=GenBank:WP_000080445.1;Name=WP_000080445.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=CCO34_RS08300;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080445.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 139196 140467 . - . ID=gene-CCO34_RS08305;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=CCO34_RS08305;old_locus_tag=CCO34_08300 NZ_NPMD01000003.1 Protein Homology CDS 139196 140467 . - 0 ID=cds-WP_000658628.1;Parent=gene-CCO34_RS08305;Dbxref=GenBank:WP_000658628.1;Name=WP_000658628.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=CCO34_RS08305;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000658628.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 140665 141471 . - . ID=gene-CCO34_RS08310;Name=CCO34_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08310;old_locus_tag=CCO34_08305 NZ_NPMD01000003.1 Protein Homology CDS 140665 141471 . - 0 ID=cds-WP_001175242.1;Parent=gene-CCO34_RS08310;Dbxref=GenBank:WP_001175242.1;Name=WP_001175242.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462169.1;locus_tag=CCO34_RS08310;product=HPr family phosphocarrier protein;protein_id=WP_001175242.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 141458 142885 . - . ID=gene-CCO34_RS08315;Name=CCO34_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08315;old_locus_tag=CCO34_08310 NZ_NPMD01000003.1 Protein Homology CDS 141458 142885 . - 0 ID=cds-WP_000719916.1;Parent=gene-CCO34_RS08315;Dbxref=GenBank:WP_000719916.1;Name=WP_000719916.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462168.1;locus_tag=CCO34_RS08315;product=PTS fructose transporter subunit IIC;protein_id=WP_000719916.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 142912 143826 . - . ID=gene-CCO34_RS08320;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO34_RS08320;old_locus_tag=CCO34_08315 NZ_NPMD01000003.1 Protein Homology CDS 142912 143826 . - 0 ID=cds-WP_001520582.1;Parent=gene-CCO34_RS08320;Dbxref=GenBank:WP_001520582.1;Name=WP_001520582.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462167.1;locus_tag=CCO34_RS08320;product=1-phosphofructokinase;protein_id=WP_001520582.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 143837 144691 . - . ID=gene-CCO34_RS08325;Name=CCO34_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08325;old_locus_tag=CCO34_08320 NZ_NPMD01000003.1 Protein Homology CDS 143837 144691 . - 0 ID=cds-WP_000469985.1;Parent=gene-CCO34_RS08325;Dbxref=GenBank:WP_000469985.1;Name=WP_000469985.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=CCO34_RS08325;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469985.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 145025 145858 . + . ID=gene-CCO34_RS08330;Name=CCO34_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08330;old_locus_tag=CCO34_08325 NZ_NPMD01000003.1 Protein Homology CDS 145025 145858 . + 0 ID=cds-WP_001118363.1;Parent=gene-CCO34_RS08330;Dbxref=GenBank:WP_001118363.1;Name=WP_001118363.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462165.1;locus_tag=CCO34_RS08330;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001118363.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 145869 146816 . + . ID=gene-CCO34_RS08335;Name=CCO34_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08335;old_locus_tag=CCO34_08330 NZ_NPMD01000003.1 Protein Homology CDS 145869 146816 . + 0 ID=cds-WP_001027807.1;Parent=gene-CCO34_RS08335;Dbxref=GenBank:WP_001027807.1;Name=WP_001027807.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462164.1;locus_tag=CCO34_RS08335;product=sugar kinase;protein_id=WP_001027807.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 147056 148627 . - . ID=gene-CCO34_RS08340;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=CCO34_RS08340;old_locus_tag=CCO34_08335 NZ_NPMD01000003.1 Protein Homology CDS 147056 148627 . - 0 ID=cds-WP_094965417.1;Parent=gene-CCO34_RS08340;Dbxref=GenBank:WP_094965417.1;Name=WP_094965417.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=CCO34_RS08340;product=galactarate dehydratase;protein_id=WP_094965417.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 149157 149927 . + . ID=gene-CCO34_RS08345;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=CCO34_RS08345;old_locus_tag=CCO34_08340 NZ_NPMD01000003.1 Protein Homology CDS 149157 149927 . + 0 ID=cds-WP_001057715.1;Parent=gene-CCO34_RS08345;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=CCO34_RS08345;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 149953 150843 . + . ID=gene-CCO34_RS08350;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=CCO34_RS08350;old_locus_tag=CCO34_08345 NZ_NPMD01000003.1 Protein Homology CDS 149953 150843 . + 0 ID=cds-WP_000178106.1;Parent=gene-CCO34_RS08350;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=CCO34_RS08350;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 150941 152086 . + . ID=gene-CCO34_RS08355;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=CCO34_RS08355;old_locus_tag=CCO34_08350 NZ_NPMD01000003.1 Protein Homology CDS 150941 152086 . + 0 ID=cds-WP_000706458.1;Parent=gene-CCO34_RS08355;Dbxref=GenBank:WP_000706458.1;Name=WP_000706458.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=CCO34_RS08355;product=glycerate 2-kinase;protein_id=WP_000706458.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 152119 152493 . + . ID=gene-CCO34_RS08360;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CCO34_RS08360;old_locus_tag=CCO34_08355 NZ_NPMD01000003.1 cmsearch RNase_P_RNA 152119 152493 . + . ID=rna-CCO34_RS08360;Parent=gene-CCO34_RS08360;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS08360;product=RNase P RNA component class A NZ_NPMD01000003.1 cmsearch exon 152119 152493 . + . ID=exon-CCO34_RS08360-1;Parent=rna-CCO34_RS08360;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS08360;product=RNase P RNA component class A NZ_NPMD01000003.1 RefSeq gene 153430 154368 . + . ID=gene-CCO34_RS08375;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=CCO34_RS08375;old_locus_tag=CCO34_08370 NZ_NPMD01000003.1 Protein Homology CDS 153430 154368 . + 0 ID=cds-WP_001094907.1;Parent=gene-CCO34_RS08375;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=CCO34_RS08375;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 154466 155455 . + . ID=gene-CCO34_RS08380;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CCO34_RS08380;old_locus_tag=CCO34_08375 NZ_NPMD01000003.1 Protein Homology CDS 154466 155455 . + 0 ID=cds-WP_000548370.1;Parent=gene-CCO34_RS08380;Dbxref=GenBank:WP_000548370.1;Name=WP_000548370.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=CCO34_RS08380;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548370.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 155476 156807 . + . ID=gene-CCO34_RS08385;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=CCO34_RS08385;old_locus_tag=CCO34_08380 NZ_NPMD01000003.1 Protein Homology CDS 155476 156807 . + 0 ID=cds-WP_000108129.1;Parent=gene-CCO34_RS08385;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=CCO34_RS08385;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 156874 158082 . + . ID=gene-CCO34_RS08390;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=CCO34_RS08390;old_locus_tag=CCO34_08385 NZ_NPMD01000003.1 Protein Homology CDS 156874 158082 . + 0 ID=cds-WP_001001861.1;Parent=gene-CCO34_RS08390;Dbxref=GenBank:WP_001001861.1;Name=WP_001001861.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=CCO34_RS08390;product=propionate kinase;protein_id=WP_001001861.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 158116 160410 . + . ID=gene-CCO34_RS08395;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO34_RS08395;old_locus_tag=CCO34_08390 NZ_NPMD01000003.1 Protein Homology CDS 158116 160410 . + 0 ID=cds-WP_000867323.1;Parent=gene-CCO34_RS08395;Dbxref=GenBank:WP_000867323.1;Name=WP_000867323.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=CCO34_RS08395;product=formate C-acetyltransferase;protein_id=WP_000867323.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 160480 161844 . + . ID=gene-CCO34_RS08400;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=CCO34_RS08400;old_locus_tag=CCO34_08395 NZ_NPMD01000003.1 Protein Homology CDS 160480 161844 . + 0 ID=cds-WP_000622077.1;Parent=gene-CCO34_RS08400;Dbxref=GenBank:WP_000622077.1;Name=WP_000622077.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=CCO34_RS08400;product=L-serine ammonia-lyase;protein_id=WP_000622077.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 162161 163492 . + . ID=gene-CCO34_RS08405;Name=CCO34_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08405;old_locus_tag=CCO34_08400 NZ_NPMD01000003.1 Protein Homology CDS 162161 163492 . + 0 ID=cds-WP_000443189.1;Parent=gene-CCO34_RS08405;Dbxref=GenBank:WP_000443189.1;Name=WP_000443189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=CCO34_RS08405;product=amino acid permease;protein_id=WP_000443189.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 163518 164828 . + . ID=gene-CCO34_RS08410;Name=CCO34_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08410;old_locus_tag=CCO34_08405 NZ_NPMD01000003.1 Protein Homology CDS 163518 164828 . + 0 ID=cds-WP_000463089.1;Parent=gene-CCO34_RS08410;Dbxref=GenBank:WP_000463089.1;Name=WP_000463089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=CCO34_RS08410;product=serine dehydratase subunit alpha family protein;protein_id=WP_000463089.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 164941 165105 . - . ID=gene-CCO34_RS08415;Name=CCO34_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08415;old_locus_tag=CCO34_08410 NZ_NPMD01000003.1 Protein Homology CDS 164941 165105 . - 0 ID=cds-WP_000039327.1;Parent=gene-CCO34_RS08415;Dbxref=GenBank:WP_000039327.1;Name=WP_000039327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=CCO34_RS08415;product=hypothetical protein;protein_id=WP_000039327.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 165129 165830 . - . ID=gene-CCO34_RS08420;Name=CCO34_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08420;old_locus_tag=CCO34_08415 NZ_NPMD01000003.1 Protein Homology CDS 165129 165830 . - 0 ID=cds-WP_000633549.1;Parent=gene-CCO34_RS08420;Dbxref=GenBank:WP_000633549.1;Name=WP_000633549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=CCO34_RS08420;product=pirin family protein;protein_id=WP_000633549.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 165935 166831 . + . ID=gene-CCO34_RS08425;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=CCO34_RS08425;old_locus_tag=CCO34_08420 NZ_NPMD01000003.1 Protein Homology CDS 165935 166831 . + 0 ID=cds-WP_001041026.1;Parent=gene-CCO34_RS08425;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=CCO34_RS08425;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 166870 167235 . - . ID=gene-CCO34_RS08430;Name=CCO34_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08430;old_locus_tag=CCO34_08425 NZ_NPMD01000003.1 Protein Homology CDS 166870 167235 . - 0 ID=cds-WP_000384139.1;Parent=gene-CCO34_RS08430;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=CCO34_RS08430;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 167359 168345 . - . ID=gene-CCO34_RS08435;Name=CCO34_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08435;old_locus_tag=CCO34_08430 NZ_NPMD01000003.1 Protein Homology CDS 167359 168345 . - 0 ID=cds-WP_000531165.1;Parent=gene-CCO34_RS08435;Dbxref=GenBank:WP_000531165.1;Name=WP_000531165.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=CCO34_RS08435;product=glutathione S-transferase family protein;protein_id=WP_000531165.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 168413 168805 . - . ID=gene-CCO34_RS08440;Name=CCO34_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08440;old_locus_tag=CCO34_08435 NZ_NPMD01000003.1 Protein Homology CDS 168413 168805 . - 0 ID=cds-WP_001592732.1;Parent=gene-CCO34_RS08440;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=CCO34_RS08440;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 169053 169352 . - . ID=gene-CCO34_RS08445;Name=CCO34_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08445;old_locus_tag=CCO34_08440 NZ_NPMD01000003.1 Protein Homology CDS 169053 169352 . - 0 ID=cds-WP_000095496.1;Parent=gene-CCO34_RS08445;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=CCO34_RS08445;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 169349 169747 . - . ID=gene-CCO34_RS08450;Name=CCO34_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08450;old_locus_tag=CCO34_08445 NZ_NPMD01000003.1 Protein Homology CDS 169349 169747 . - 0 ID=cds-WP_000785626.1;Parent=gene-CCO34_RS08450;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=CCO34_RS08450;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 169750 170055 . - . ID=gene-CCO34_RS08455;Name=CCO34_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08455;old_locus_tag=CCO34_08450 NZ_NPMD01000003.1 Protein Homology CDS 169750 170055 . - 0 ID=cds-WP_000031219.1;Parent=gene-CCO34_RS08455;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=CCO34_RS08455;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 170097 170465 . - . ID=gene-CCO34_RS08460;Name=CCO34_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08460;old_locus_tag=CCO34_08455 NZ_NPMD01000003.1 Protein Homology CDS 170097 170465 . - 0 ID=cds-WP_000877297.1;Parent=gene-CCO34_RS08460;Dbxref=GenBank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=CCO34_RS08460;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 170610 170993 . - . ID=gene-CCO34_RS08465;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=CCO34_RS08465;old_locus_tag=CCO34_08460 NZ_NPMD01000003.1 Protein Homology CDS 170610 170993 . - 0 ID=cds-WP_000917516.1;Parent=gene-CCO34_RS08465;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=CCO34_RS08465;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 170997 171659 . - . ID=gene-CCO34_RS08470;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=CCO34_RS08470;old_locus_tag=CCO34_08465 NZ_NPMD01000003.1 Protein Homology CDS 170997 171659 . - 0 ID=cds-WP_000422141.1;Parent=gene-CCO34_RS08470;Dbxref=GenBank:WP_000422141.1;Name=WP_000422141.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=CCO34_RS08470;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422141.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 172109 173353 . - . ID=gene-CCO34_RS08480;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=CCO34_RS08480;old_locus_tag=CCO34_08475 NZ_NPMD01000003.1 Protein Homology CDS 172109 173353 . - 0 ID=cds-WP_000235363.1;Parent=gene-CCO34_RS08480;Dbxref=GenBank:WP_000235363.1;Name=WP_000235363.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=CCO34_RS08480;product=serine/threonine transporter SstT;protein_id=WP_000235363.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 173608 174576 . - . ID=gene-CCO34_RS08485;Name=CCO34_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08485;old_locus_tag=CCO34_08480 NZ_NPMD01000003.1 Protein Homology CDS 173608 174576 . - 0 ID=cds-WP_001098837.1;Parent=gene-CCO34_RS08485;Dbxref=GenBank:WP_001098837.1;Name=WP_001098837.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=CCO34_RS08485;product=TerC family protein;protein_id=WP_001098837.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 174847 175845 . - . ID=gene-CCO34_RS08490;Name=CCO34_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08490;old_locus_tag=CCO34_08485 NZ_NPMD01000003.1 Protein Homology CDS 174847 175845 . - 0 ID=cds-WP_000617682.1;Parent=gene-CCO34_RS08490;Dbxref=GenBank:WP_000617682.1;Name=WP_000617682.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=CCO34_RS08490;product=Gfo/Idh/MocA family protein;protein_id=WP_000617682.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 175934 176626 . - . ID=gene-CCO34_RS08495;Name=CCO34_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08495;old_locus_tag=CCO34_08490 NZ_NPMD01000003.1 Protein Homology CDS 175934 176626 . - 0 ID=cds-WP_000951045.1;Parent=gene-CCO34_RS08495;Dbxref=GenBank:WP_000951045.1;Name=WP_000951045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=CCO34_RS08495;product=SanA/YdcF family protein;protein_id=WP_000951045.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 176778 177275 . - . ID=gene-CCO34_RS08500;Name=CCO34_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08500;old_locus_tag=CCO34_08495 NZ_NPMD01000003.1 Protein Homology CDS 176778 177275 . - 0 ID=cds-WP_000202966.1;Parent=gene-CCO34_RS08500;Dbxref=GenBank:WP_000202966.1;Name=WP_000202966.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=CCO34_RS08500;product=M48 family metallopeptidase;protein_id=WP_000202966.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 177361 178497 . + . ID=gene-CCO34_RS08505;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=CCO34_RS08505;old_locus_tag=CCO34_08500 NZ_NPMD01000003.1 Protein Homology CDS 177361 178497 . + 0 ID=cds-WP_000019989.1;Parent=gene-CCO34_RS08505;Dbxref=GenBank:WP_000019989.1;Name=WP_000019989.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=CCO34_RS08505;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019989.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 178578 180596 . - . ID=gene-CCO34_RS08510;Name=CCO34_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08510;old_locus_tag=CCO34_08505 NZ_NPMD01000003.1 Protein Homology CDS 178578 180596 . - 0 ID=cds-WP_000121512.1;Parent=gene-CCO34_RS08510;Dbxref=GenBank:WP_000121512.1;Name=WP_000121512.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=CCO34_RS08510;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121512.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 180767 182146 . - . ID=gene-CCO34_RS08515;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=CCO34_RS08515;old_locus_tag=CCO34_08510 NZ_NPMD01000003.1 Protein Homology CDS 180767 182146 . - 0 ID=cds-WP_001520281.1;Parent=gene-CCO34_RS08515;Dbxref=GenBank:WP_001520281.1;Name=WP_001520281.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=CCO34_RS08515;product=putrescine aminotransferase;protein_id=WP_001520281.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 182576 184096 . + . ID=gene-CCO34_RS08525;Name=CCO34_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08525;old_locus_tag=CCO34_08520 NZ_NPMD01000003.1 Protein Homology CDS 182576 184096 . + 0 ID=cds-WP_000094650.1;Parent=gene-CCO34_RS08525;Dbxref=GenBank:WP_000094650.1;Name=WP_000094650.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=CCO34_RS08525;product=methyl-accepting chemotaxis protein;protein_id=WP_000094650.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 184484 186049 . + . ID=gene-CCO34_RS08530;Name=CCO34_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08530;old_locus_tag=CCO34_08525 NZ_NPMD01000003.1 Protein Homology CDS 184484 186049 . + 0 ID=cds-WP_000478468.1;Parent=gene-CCO34_RS08530;Dbxref=GenBank:WP_000478468.1;Name=WP_000478468.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=CCO34_RS08530;product=methyl-accepting chemotaxis protein;protein_id=WP_000478468.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 186046 186693 . - . ID=gene-CCO34_RS08535;Name=CCO34_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08535;old_locus_tag=CCO34_08530 NZ_NPMD01000003.1 Protein Homology CDS 186046 186693 . - 0 ID=cds-WP_001582501.1;Parent=gene-CCO34_RS08535;Dbxref=GenBank:WP_001582501.1;Name=WP_001582501.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=CCO34_RS08535;product=PadR family transcriptional regulator;protein_id=WP_001582501.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 186925 187692 . + . ID=gene-CCO34_RS08540;Name=CCO34_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08540;old_locus_tag=CCO34_08535 NZ_NPMD01000003.1 Protein Homology CDS 186925 187692 . + 0 ID=cds-WP_000213688.1;Parent=gene-CCO34_RS08540;Dbxref=GenBank:WP_000213688.1;Name=WP_000213688.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=CCO34_RS08540;product=siderophore-interacting protein;protein_id=WP_000213688.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 187772 187847 . - . ID=gene-CCO34_RS08545;Name=CCO34_RS08545;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS08545;old_locus_tag=CCO34_08540 NZ_NPMD01000003.1 tRNAscan-SE tRNA 187772 187847 . - . ID=rna-CCO34_RS08545;Parent=gene-CCO34_RS08545;anticodon=(pos:complement(187812..187814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS08545;product=tRNA-Ile NZ_NPMD01000003.1 tRNAscan-SE exon 187772 187847 . - . ID=exon-CCO34_RS08545-1;Parent=rna-CCO34_RS08545;anticodon=(pos:complement(187812..187814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS08545;product=tRNA-Ile NZ_NPMD01000003.1 RefSeq gene 187973 188479 . + . ID=gene-CCO34_RS08550;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=CCO34_RS08550;old_locus_tag=CCO34_08545 NZ_NPMD01000003.1 Protein Homology CDS 187973 188479 . + 0 ID=cds-WP_000237776.1;Parent=gene-CCO34_RS08550;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=CCO34_RS08550;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 188603 190585 . - . ID=gene-CCO34_RS08555;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CCO34_RS08555;old_locus_tag=CCO34_08550 NZ_NPMD01000003.1 Protein Homology CDS 188603 190585 . - 0 ID=cds-WP_001120159.1;Parent=gene-CCO34_RS08555;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=CCO34_RS08555;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 190600 192345 . - . ID=gene-CCO34_RS08560;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CCO34_RS08560;old_locus_tag=CCO34_08555 NZ_NPMD01000003.1 Protein Homology CDS 190600 192345 . - 0 ID=cds-WP_000918865.1;Parent=gene-CCO34_RS08560;Dbxref=GenBank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=CCO34_RS08560;product=DNA primase;protein_id=WP_000918865.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 192581 192796 . - . ID=gene-CCO34_RS08565;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CCO34_RS08565;old_locus_tag=CCO34_08560 NZ_NPMD01000003.1 Protein Homology CDS 192581 192796 . - 0 ID=cds-WP_001144069.1;Parent=gene-CCO34_RS08565;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=CCO34_RS08565;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 193024 194037 . + . ID=gene-CCO34_RS08575;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CCO34_RS08575;old_locus_tag=CCO34_08570 NZ_NPMD01000003.1 Protein Homology CDS 193024 194037 . + 0 ID=cds-WP_001264394.1;Parent=gene-CCO34_RS08575;Dbxref=GenBank:WP_001264394.1;Name=WP_001264394.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=CCO34_RS08575;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264394.1;transl_table=11 NZ_NPMD01000003.1 RefSeq pseudogene 194160 194303 . - . ID=gene-CCO34_RS25290;Name=CCO34_RS25290;end_range=194303,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25290;partial=true;pseudo=true;start_range=.,194160 NZ_NPMD01000003.1 Protein Homology CDS 194160 194303 . - 0 ID=cds-CCO34_RS25290;Parent=gene-CCO34_RS25290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=194303,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=CCO34_RS25290;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,194160;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 194287 194898 . - . ID=gene-CCO34_RS08585;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CCO34_RS08585;old_locus_tag=CCO34_08580 NZ_NPMD01000003.1 Protein Homology CDS 194287 194898 . - 0 ID=cds-WP_001272784.1;Parent=gene-CCO34_RS08585;Dbxref=GenBank:WP_001272784.1;Name=WP_001272784.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=CCO34_RS08585;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 195005 195364 . + . ID=gene-CCO34_RS08590;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CCO34_RS08590;old_locus_tag=CCO34_08585 NZ_NPMD01000003.1 Protein Homology CDS 195005 195364 . + 0 ID=cds-WP_000355776.1;Parent=gene-CCO34_RS08590;Dbxref=GenBank:WP_000355776.1;Name=WP_000355776.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=CCO34_RS08590;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_000355776.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 195462 196283 . + . ID=gene-CCO34_RS08595;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=CCO34_RS08595;old_locus_tag=CCO34_08590 NZ_NPMD01000003.1 Protein Homology CDS 195462 196283 . + 0 ID=cds-WP_001281933.1;Parent=gene-CCO34_RS08595;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=CCO34_RS08595;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 196388 197629 . - . ID=gene-CCO34_RS08600;Name=CCO34_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08600;old_locus_tag=CCO34_08595 NZ_NPMD01000003.1 Protein Homology CDS 196388 197629 . - 0 ID=cds-WP_000708447.1;Parent=gene-CCO34_RS08600;Dbxref=GenBank:WP_000708447.1;Name=WP_000708447.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=CCO34_RS08600;product=multifunctional CCA addition/repair protein;protein_id=WP_000708447.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 197692 198306 . - . ID=gene-CCO34_RS08605;Name=CCO34_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08605;old_locus_tag=CCO34_08600 NZ_NPMD01000003.1 Protein Homology CDS 197692 198306 . - 0 ID=cds-WP_001125344.1;Parent=gene-CCO34_RS08605;Dbxref=GenBank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=CCO34_RS08605;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 198548 199849 . + . ID=gene-CCO34_RS08610;Name=CCO34_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08610;old_locus_tag=CCO34_08605 NZ_NPMD01000003.1 Protein Homology CDS 198548 199849 . + 0 ID=cds-WP_023228772.1;Parent=gene-CCO34_RS08610;Dbxref=GenBank:WP_023228772.1;Name=WP_023228772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=CCO34_RS08610;product=inorganic triphosphatase;protein_id=WP_023228772.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 199967 202810 . + . ID=gene-CCO34_RS08615;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=CCO34_RS08615;old_locus_tag=CCO34_08610 NZ_NPMD01000003.1 Protein Homology CDS 199967 202810 . + 0 ID=cds-WP_080176649.1;Parent=gene-CCO34_RS08615;Dbxref=GenBank:WP_080176649.1;Name=WP_080176649.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=CCO34_RS08615;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_080176649.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 202858 204291 . + . ID=gene-CCO34_RS08620;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=CCO34_RS08620;old_locus_tag=CCO34_08615 NZ_NPMD01000003.1 Protein Homology CDS 202858 204291 . + 0 ID=cds-WP_000867682.1;Parent=gene-CCO34_RS08620;Dbxref=GenBank:WP_000867682.1;Name=WP_000867682.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=CCO34_RS08620;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867682.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 204451 204510 . - . ID=gene-CCO34_RS25680;Name=CCO34_RS25680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25680 NZ_NPMD01000003.1 Protein Homology CDS 204451 204510 . - 0 ID=cds-WP_001804776.1;Parent=gene-CCO34_RS25680;Dbxref=GenBank:WP_001804776.1;Name=WP_001804776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=CCO34_RS25680;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001804776.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 204750 206429 . - . ID=gene-CCO34_RS08630;Name=CCO34_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08630;old_locus_tag=CCO34_08625 NZ_NPMD01000003.1 Protein Homology CDS 204750 206429 . - 0 ID=cds-WP_000342879.1;Parent=gene-CCO34_RS08630;Dbxref=GenBank:WP_000342879.1;Name=WP_000342879.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=CCO34_RS08630;product=flotillin family protein;protein_id=WP_000342879.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 206448 207068 . - . ID=gene-CCO34_RS08635;Name=CCO34_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08635;old_locus_tag=CCO34_08630 NZ_NPMD01000003.1 Protein Homology CDS 206448 207068 . - 0 ID=cds-WP_000171739.1;Parent=gene-CCO34_RS08635;Dbxref=GenBank:WP_000171739.1;Name=WP_000171739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=CCO34_RS08635;product=OB-fold-containig protein;protein_id=WP_000171739.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 207326 207535 . + . ID=gene-CCO34_RS08640;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=CCO34_RS08640;old_locus_tag=CCO34_08635 NZ_NPMD01000003.1 Protein Homology CDS 207326 207535 . + 0 ID=cds-WP_000928927.1;Parent=gene-CCO34_RS08640;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=CCO34_RS08640;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 207610 207906 . - . ID=gene-CCO34_RS08645;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=CCO34_RS08645;old_locus_tag=CCO34_08640 NZ_NPMD01000003.1 Protein Homology CDS 207610 207906 . - 0 ID=cds-WP_000566824.1;Parent=gene-CCO34_RS08645;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=CCO34_RS08645;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11 NZ_NPMD01000003.1 cmsearch riboswitch 208039 208237 . + . ID=id-NZ_NPMD01000003.1:208039..208237;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMD01000003.1 RefSeq gene 208343 208996 . + . ID=gene-CCO34_RS08650;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=CCO34_RS08650;old_locus_tag=CCO34_08645 NZ_NPMD01000003.1 Protein Homology CDS 208343 208996 . + 0 ID=cds-WP_001076978.1;Parent=gene-CCO34_RS08650;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=CCO34_RS08650;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 209167 209844 . - . ID=gene-CCO34_RS08655;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=CCO34_RS08655;old_locus_tag=CCO34_08650 NZ_NPMD01000003.1 Protein Homology CDS 209167 209844 . - 0 ID=cds-WP_000345576.1;Parent=gene-CCO34_RS08655;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=CCO34_RS08655;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 209859 210530 . - . ID=gene-CCO34_RS08660;Name=CCO34_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08660;old_locus_tag=CCO34_08655 NZ_NPMD01000003.1 Protein Homology CDS 209859 210530 . - 0 ID=cds-WP_000096230.1;Parent=gene-CCO34_RS08660;Dbxref=GenBank:WP_000096230.1;Name=WP_000096230.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=CCO34_RS08660;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096230.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 210550 212346 . - . ID=gene-CCO34_RS08665;Name=CCO34_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08665;old_locus_tag=CCO34_08660 NZ_NPMD01000003.1 Protein Homology CDS 210550 212346 . - 0 ID=cds-WP_000460259.1;Parent=gene-CCO34_RS08665;Dbxref=GenBank:WP_000460259.1;Name=WP_000460259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=CCO34_RS08665;product=aryl-sulfate sulfotransferase;protein_id=WP_000460259.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 212746 212922 . + . ID=gene-CCO34_RS26035;Name=CCO34_RS26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26035;old_locus_tag=CCO34_08665 NZ_NPMD01000003.1 Protein Homology CDS 212746 212922 . + 0 ID=cds-WP_000469259.1;Parent=gene-CCO34_RS26035;Dbxref=GenBank:WP_000469259.1;Name=WP_000469259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=CCO34_RS26035;product=hypothetical protein;protein_id=WP_000469259.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 212989 213762 . - . ID=gene-CCO34_RS08675;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=CCO34_RS08675;old_locus_tag=CCO34_08670 NZ_NPMD01000003.1 Protein Homology CDS 212989 213762 . - 0 ID=cds-WP_000115874.1;Parent=gene-CCO34_RS08675;Dbxref=GenBank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=CCO34_RS08675;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 213903 214691 . + . ID=gene-CCO34_RS08680;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=CCO34_RS08680;old_locus_tag=CCO34_08675 NZ_NPMD01000003.1 Protein Homology CDS 213903 214691 . + 0 ID=cds-WP_001520560.1;Parent=gene-CCO34_RS08680;Dbxref=GenBank:WP_001520560.1;Name=WP_001520560.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=CCO34_RS08680;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001520560.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 214753 215916 . - . ID=gene-CCO34_RS08685;Name=CCO34_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08685;old_locus_tag=CCO34_08680 NZ_NPMD01000003.1 Protein Homology CDS 214753 215916 . - 0 ID=cds-WP_000442833.1;Parent=gene-CCO34_RS08685;Dbxref=GenBank:WP_000442833.1;Name=WP_000442833.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=CCO34_RS08685;product=glutathionylspermidine synthase family protein;protein_id=WP_000442833.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 215922 216593 . - . ID=gene-CCO34_RS08690;Name=CCO34_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08690;old_locus_tag=CCO34_08685 NZ_NPMD01000003.1 Protein Homology CDS 215922 216593 . - 0 ID=cds-WP_000831528.1;Parent=gene-CCO34_RS08690;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=CCO34_RS08690;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 216806 218281 . - . ID=gene-CCO34_RS08700;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=CCO34_RS08700;old_locus_tag=CCO34_08695 NZ_NPMD01000003.1 Protein Homology CDS 216806 218281 . - 0 ID=cds-WP_001663008.1;Parent=gene-CCO34_RS08700;Dbxref=GenBank:WP_001663008.1;Name=WP_001663008.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=CCO34_RS08700;product=outer membrane channel protein TolC;protein_id=WP_001663008.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 218482 219114 . + . ID=gene-CCO34_RS08705;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=CCO34_RS08705;old_locus_tag=CCO34_08700 NZ_NPMD01000003.1 Protein Homology CDS 218482 219114 . + 0 ID=cds-WP_001231950.1;Parent=gene-CCO34_RS08705;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=CCO34_RS08705;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 219111 219533 . + . ID=gene-CCO34_RS08710;Name=CCO34_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08710;old_locus_tag=CCO34_08705 NZ_NPMD01000003.1 Protein Homology CDS 219111 219533 . + 0 ID=cds-WP_000833404.1;Parent=gene-CCO34_RS08710;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=CCO34_RS08710;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 219558 220385 . + . ID=gene-CCO34_RS08715;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=CCO34_RS08715;old_locus_tag=CCO34_08710 NZ_NPMD01000003.1 Protein Homology CDS 219558 220385 . + 0 ID=cds-WP_000444735.1;Parent=gene-CCO34_RS08715;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=CCO34_RS08715;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 220385 220966 . + . ID=gene-CCO34_RS08720;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=CCO34_RS08720;old_locus_tag=CCO34_08715 NZ_NPMD01000003.1 Protein Homology CDS 220385 220966 . + 0 ID=cds-WP_000105725.1;Parent=gene-CCO34_RS08720;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=CCO34_RS08720;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 220994 222886 . + . ID=gene-CCO34_RS08725;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CCO34_RS08725;old_locus_tag=CCO34_08720 NZ_NPMD01000003.1 Protein Homology CDS 220994 222886 . + 0 ID=cds-WP_000195318.1;Parent=gene-CCO34_RS08725;Dbxref=GenBank:WP_000195318.1;Name=WP_000195318.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=CCO34_RS08725;product=DNA topoisomerase IV subunit B;protein_id=WP_000195318.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 223011 223325 . - . ID=gene-CCO34_RS08730;Name=CCO34_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08730;old_locus_tag=CCO34_08725 NZ_NPMD01000003.1 Protein Homology CDS 223011 223325 . - 0 ID=cds-WP_000958587.1;Parent=gene-CCO34_RS08730;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=CCO34_RS08730;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 223357 223938 . - . ID=gene-CCO34_RS08735;Name=CCO34_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08735;old_locus_tag=CCO34_08730 NZ_NPMD01000003.1 Protein Homology CDS 223357 223938 . - 0 ID=cds-WP_000065410.1;Parent=gene-CCO34_RS08735;Dbxref=GenBank:WP_000065410.1;Name=WP_000065410.1;Ontology_term=GO:0008753,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=CCO34_RS08735;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065410.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 224045 225394 . - . ID=gene-CCO34_RS08740;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=CCO34_RS08740;old_locus_tag=CCO34_08735 NZ_NPMD01000003.1 Protein Homology CDS 224045 225394 . - 0 ID=cds-WP_000779324.1;Parent=gene-CCO34_RS08740;Dbxref=GenBank:WP_000779324.1;Name=WP_000779324.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=CCO34_RS08740;product=quorum sensing histidine kinase QseC;protein_id=WP_000779324.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 225391 226050 . - . ID=gene-CCO34_RS08745;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=CCO34_RS08745;old_locus_tag=CCO34_08740 NZ_NPMD01000003.1 Protein Homology CDS 225391 226050 . - 0 ID=cds-WP_001221574.1;Parent=gene-CCO34_RS08745;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=CCO34_RS08745;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 226202 226594 . + . ID=gene-CCO34_RS08750;Name=CCO34_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08750;old_locus_tag=CCO34_08745 NZ_NPMD01000003.1 Protein Homology CDS 226202 226594 . + 0 ID=cds-WP_000731552.1;Parent=gene-CCO34_RS08750;Dbxref=GenBank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=CCO34_RS08750;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 226666 227532 . + . ID=gene-CCO34_RS08755;Name=CCO34_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08755;old_locus_tag=CCO34_08750 NZ_NPMD01000003.1 Protein Homology CDS 226666 227532 . + 0 ID=cds-WP_000998788.1;Parent=gene-CCO34_RS08755;Dbxref=GenBank:WP_000998788.1;Name=WP_000998788.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=CCO34_RS08755;product=AraC family transcriptional regulator;protein_id=WP_000998788.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 227643 229901 . + . ID=gene-CCO34_RS08760;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CCO34_RS08760;old_locus_tag=CCO34_08755 NZ_NPMD01000003.1 Protein Homology CDS 227643 229901 . + 0 ID=cds-WP_001281855.1;Parent=gene-CCO34_RS08760;Dbxref=GenBank:WP_001281855.1;Name=WP_001281855.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=CCO34_RS08760;product=DNA topoisomerase IV subunit A;protein_id=WP_001281855.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 230158 230895 . + . ID=gene-CCO34_RS08765;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=CCO34_RS08765;old_locus_tag=CCO34_08760 NZ_NPMD01000003.1 Protein Homology CDS 230158 230895 . + 0 ID=cds-WP_000965730.1;Parent=gene-CCO34_RS08765;Dbxref=GenBank:WP_000965730.1;Name=WP_000965730.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=CCO34_RS08765;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965730.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 230969 232381 . + . ID=gene-CCO34_RS08770;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=CCO34_RS08770;old_locus_tag=CCO34_08765 NZ_NPMD01000003.1 Protein Homology CDS 230969 232381 . + 0 ID=cds-WP_000010658.1;Parent=gene-CCO34_RS08770;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=CCO34_RS08770;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 232426 233733 . - . ID=gene-CCO34_RS08775;Name=CCO34_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08775;old_locus_tag=CCO34_08770 NZ_NPMD01000003.1 Protein Homology CDS 232426 233733 . - 0 ID=cds-WP_000345259.1;Parent=gene-CCO34_RS08775;Dbxref=GenBank:WP_000345259.1;Name=WP_000345259.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=CCO34_RS08775;product=TRAP transporter large permease;protein_id=WP_000345259.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 233744 234226 . - . ID=gene-CCO34_RS08780;Name=CCO34_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08780;old_locus_tag=CCO34_08775 NZ_NPMD01000003.1 Protein Homology CDS 233744 234226 . - 0 ID=cds-WP_001221827.1;Parent=gene-CCO34_RS08780;Dbxref=GenBank:WP_001221827.1;Name=WP_001221827.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=CCO34_RS08780;product=TRAP transporter small permease;protein_id=WP_001221827.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 234268 235251 . - . ID=gene-CCO34_RS08785;Name=CCO34_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08785;old_locus_tag=CCO34_08780 NZ_NPMD01000003.1 Protein Homology CDS 234268 235251 . - 0 ID=cds-WP_000799367.1;Parent=gene-CCO34_RS08785;Dbxref=GenBank:WP_000799367.1;Name=WP_000799367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=CCO34_RS08785;product=TRAP transporter substrate-binding protein;protein_id=WP_000799367.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 235739 237910 . + . ID=gene-CCO34_RS08790;Name=CCO34_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08790;old_locus_tag=CCO34_08785 NZ_NPMD01000003.1 Protein Homology CDS 235739 237910 . + 0 ID=cds-WP_001274458.1;Parent=gene-CCO34_RS08790;Dbxref=GenBank:WP_001274458.1;Name=WP_001274458.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=CCO34_RS08790;product=YgiQ family radical SAM protein;protein_id=WP_001274458.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 238113 238307 . + . ID=gene-CCO34_RS08795;Name=CCO34_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08795;old_locus_tag=CCO34_08790 NZ_NPMD01000003.1 GeneMarkS-2+ CDS 238113 238307 . + 0 ID=cds-WP_000525382.1;Parent=gene-CCO34_RS08795;Dbxref=GenBank:WP_000525382.1;Name=WP_000525382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS08795;product=hypothetical protein;protein_id=WP_000525382.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 238465 238920 . - . ID=gene-CCO34_RS08800;Name=CCO34_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08800;old_locus_tag=CCO34_08795 NZ_NPMD01000003.1 Protein Homology CDS 238465 238920 . - 0 ID=cds-WP_000128244.1;Parent=gene-CCO34_RS08800;Dbxref=GenBank:WP_000128244.1;Name=WP_000128244.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=CCO34_RS08800;product=HIT family protein;protein_id=WP_000128244.1;transl_table=11 NZ_NPMD01000003.1 RefSeq pseudogene 238965 240450 . - . ID=gene-CCO34_RS08805;Name=CCO34_RS08805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS08805;old_locus_tag=CCO34_08800;pseudo=true NZ_NPMD01000003.1 Protein Homology CDS 238965 240450 . - 0 ID=cds-CCO34_RS08805;Parent=gene-CCO34_RS08805;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=CCO34_RS08805;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 240616 241443 . - . ID=gene-CCO34_RS08810;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=CCO34_RS08810;old_locus_tag=CCO34_08805 NZ_NPMD01000003.1 Protein Homology CDS 240616 241443 . - 0 ID=cds-WP_000013100.1;Parent=gene-CCO34_RS08810;Dbxref=GenBank:WP_000013100.1;Name=WP_000013100.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=CCO34_RS08810;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013100.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 241549 242712 . - . ID=gene-CCO34_RS08815;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=CCO34_RS08815;old_locus_tag=CCO34_08810 NZ_NPMD01000003.1 Protein Homology CDS 241549 242712 . - 0 ID=cds-WP_001058725.1;Parent=gene-CCO34_RS08815;Dbxref=GenBank:WP_001058725.1;Name=WP_001058725.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=CCO34_RS08815;product=alcohol dehydrogenase;protein_id=WP_001058725.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 242905 243804 . + . ID=gene-CCO34_RS08820;Name=CCO34_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08820;old_locus_tag=CCO34_08815 NZ_NPMD01000003.1 Protein Homology CDS 242905 243804 . + 0 ID=cds-WP_001078198.1;Parent=gene-CCO34_RS08820;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=CCO34_RS08820;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 243868 244527 . - . ID=gene-CCO34_RS08825;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=CCO34_RS08825;old_locus_tag=CCO34_08820 NZ_NPMD01000003.1 Protein Homology CDS 243868 244527 . - 0 ID=cds-WP_000268441.1;Parent=gene-CCO34_RS08825;Dbxref=GenBank:WP_000268441.1;Name=WP_000268441.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=CCO34_RS08825;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268441.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 244667 245854 . - . ID=gene-CCO34_RS08830;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CCO34_RS08830;old_locus_tag=CCO34_08825 NZ_NPMD01000003.1 Protein Homology CDS 244667 245854 . - 0 ID=cds-WP_000130262.1;Parent=gene-CCO34_RS08830;Dbxref=GenBank:WP_000130262.1;Name=WP_000130262.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=CCO34_RS08830;product=cystathionine beta-lyase;protein_id=WP_000130262.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 246106 246840 . + . ID=gene-CCO34_RS08840;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=CCO34_RS08840;old_locus_tag=CCO34_08835 NZ_NPMD01000003.1 Protein Homology CDS 246106 246840 . + 0 ID=cds-WP_000527859.1;Parent=gene-CCO34_RS08840;Dbxref=GenBank:WP_000527859.1;Name=WP_000527859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=CCO34_RS08840;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527859.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 246847 247272 . + . ID=gene-CCO34_RS08845;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=CCO34_RS08845;old_locus_tag=CCO34_08840 NZ_NPMD01000003.1 Protein Homology CDS 246847 247272 . + 0 ID=cds-WP_001251476.1;Parent=gene-CCO34_RS08845;Dbxref=GenBank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=CCO34_RS08845;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 247385 248269 . - . ID=gene-CCO34_RS08850;Name=CCO34_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08850;old_locus_tag=CCO34_08845 NZ_NPMD01000003.1 Protein Homology CDS 247385 248269 . - 0 ID=cds-WP_000019032.1;Parent=gene-CCO34_RS08850;Dbxref=GenBank:WP_000019032.1;Name=WP_000019032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=CCO34_RS08850;product=SDR family oxidoreductase;protein_id=WP_000019032.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 248393 248797 . - . ID=gene-CCO34_RS08855;Name=CCO34_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08855;old_locus_tag=CCO34_08850 NZ_NPMD01000003.1 Protein Homology CDS 248393 248797 . - 0 ID=cds-WP_000665657.1;Parent=gene-CCO34_RS08855;Dbxref=GenBank:WP_000665657.1;Name=WP_000665657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=CCO34_RS08855;product=hypothetical protein;protein_id=WP_000665657.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 248784 249194 . - . ID=gene-CCO34_RS08860;Name=CCO34_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08860;old_locus_tag=CCO34_08855 NZ_NPMD01000003.1 Protein Homology CDS 248784 249194 . - 0 ID=cds-WP_000936446.1;Parent=gene-CCO34_RS08860;Dbxref=GenBank:WP_000936446.1;Name=WP_000936446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=CCO34_RS08860;product=hypothetical protein;protein_id=WP_000936446.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 249298 249801 . + . ID=gene-CCO34_RS08865;Name=CCO34_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08865;old_locus_tag=CCO34_08860 NZ_NPMD01000003.1 Protein Homology CDS 249298 249801 . + 0 ID=cds-WP_001535720.1;Parent=gene-CCO34_RS08865;Dbxref=GenBank:WP_001535720.1;Name=WP_001535720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=CCO34_RS08865;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001535720.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 250080 250574 . + . ID=gene-CCO34_RS08870;Name=CCO34_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08870;old_locus_tag=CCO34_08865 NZ_NPMD01000003.1 Protein Homology CDS 250080 250574 . + 0 ID=cds-WP_000439335.1;Parent=gene-CCO34_RS08870;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=CCO34_RS08870;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 250881 252524 . + . ID=gene-CCO34_RS08875;Name=CCO34_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08875;old_locus_tag=CCO34_08870 NZ_NPMD01000003.1 Protein Homology CDS 250881 252524 . + 0 ID=cds-WP_001238432.1;Parent=gene-CCO34_RS08875;Dbxref=GenBank:WP_001238432.1;Name=WP_001238432.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=CCO34_RS08875;product=methyl-accepting chemotaxis protein;protein_id=WP_001238432.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 252609 252896 . + . ID=gene-CCO34_RS08880;Name=CCO34_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08880;old_locus_tag=CCO34_08875 NZ_NPMD01000003.1 Protein Homology CDS 252609 252896 . + 0 ID=cds-WP_001059119.1;Parent=gene-CCO34_RS08880;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=CCO34_RS08880;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 253086 254204 . + . ID=gene-CCO34_RS08890;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=CCO34_RS08890;old_locus_tag=CCO34_08885 NZ_NPMD01000003.1 Protein Homology CDS 253086 254204 . + 0 ID=cds-WP_000145429.1;Parent=gene-CCO34_RS08890;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=CCO34_RS08890;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 254207 255193 . + . ID=gene-CCO34_RS08895;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=CCO34_RS08895;old_locus_tag=CCO34_08890 NZ_NPMD01000003.1 Protein Homology CDS 254207 255193 . + 0 ID=cds-WP_001081721.1;Parent=gene-CCO34_RS08895;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=CCO34_RS08895;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 255183 256361 . + . ID=gene-CCO34_RS08900;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=CCO34_RS08900;old_locus_tag=CCO34_08895 NZ_NPMD01000003.1 Protein Homology CDS 255183 256361 . + 0 ID=cds-WP_000017678.1;Parent=gene-CCO34_RS08900;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=CCO34_RS08900;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 256358 258061 . + . ID=gene-CCO34_RS08905;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=CCO34_RS08905;old_locus_tag=CCO34_08900 NZ_NPMD01000003.1 Protein Homology CDS 256358 258061 . + 0 ID=cds-WP_000083044.1;Parent=gene-CCO34_RS08905;Dbxref=GenBank:WP_000083044.1;Name=WP_000083044.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=CCO34_RS08905;product=hydrogenase 2 large subunit;protein_id=WP_000083044.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 258061 258555 . + . ID=gene-CCO34_RS08910;Name=CCO34_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08910;old_locus_tag=CCO34_08905 NZ_NPMD01000003.1 Protein Homology CDS 258061 258555 . + 0 ID=cds-WP_001221962.1;Parent=gene-CCO34_RS08910;Dbxref=GenBank:WP_001221962.1;Name=WP_001221962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=CCO34_RS08910;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221962.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 258548 259036 . + . ID=gene-CCO34_RS08915;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=CCO34_RS08915;old_locus_tag=CCO34_08910 NZ_NPMD01000003.1 Protein Homology CDS 258548 259036 . + 0 ID=cds-WP_000004950.1;Parent=gene-CCO34_RS08915;Dbxref=GenBank:WP_000004950.1;Name=WP_000004950.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=CCO34_RS08915;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004950.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 259029 259370 . + . ID=gene-CCO34_RS08920;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO34_RS08920;old_locus_tag=CCO34_08915 NZ_NPMD01000003.1 Protein Homology CDS 259029 259370 . + 0 ID=cds-WP_000544946.1;Parent=gene-CCO34_RS08920;Dbxref=GenBank:WP_000544946.1;Name=WP_000544946.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=CCO34_RS08920;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544946.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 259398 259646 . + . ID=gene-CCO34_RS08925;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=CCO34_RS08925;old_locus_tag=CCO34_08920 NZ_NPMD01000003.1 Protein Homology CDS 259398 259646 . + 0 ID=cds-WP_000334887.1;Parent=gene-CCO34_RS08925;Dbxref=GenBank:WP_000334887.1;Name=WP_000334887.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=CCO34_RS08925;product=hydrogenase maturation factor HybG;protein_id=WP_000334887.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 259722 260774 . + . ID=gene-CCO34_RS08930;Name=CCO34_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08930;old_locus_tag=CCO34_08925 NZ_NPMD01000003.1 Protein Homology CDS 259722 260774 . + 0 ID=cds-WP_001032007.1;Parent=gene-CCO34_RS08930;Dbxref=GenBank:WP_001032007.1;Name=WP_001032007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=CCO34_RS08930;product=ABC transporter substrate-binding protein;protein_id=WP_001032007.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 260774 261484 . + . ID=gene-CCO34_RS08935;Name=CCO34_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08935;old_locus_tag=CCO34_08930 NZ_NPMD01000003.1 Protein Homology CDS 260774 261484 . + 0 ID=cds-WP_001220943.1;Parent=gene-CCO34_RS08935;Dbxref=GenBank:WP_001220943.1;Name=WP_001220943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=CCO34_RS08935;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001220943.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 261552 262418 . - . ID=gene-CCO34_RS08940;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=CCO34_RS08940;old_locus_tag=CCO34_08935 NZ_NPMD01000003.1 Protein Homology CDS 261552 262418 . - 0 ID=cds-WP_000774853.1;Parent=gene-CCO34_RS08940;Dbxref=GenBank:WP_000774853.1;Name=WP_000774853.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=CCO34_RS08940;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_000774853.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 262645 264501 . + . ID=gene-CCO34_RS08945;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=CCO34_RS08945;old_locus_tag=CCO34_08940 NZ_NPMD01000003.1 Protein Homology CDS 262645 264501 . + 0 ID=cds-WP_023228762.1;Parent=gene-CCO34_RS08945;Dbxref=GenBank:WP_023228762.1;Name=WP_023228762.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=CCO34_RS08945;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_023228762.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 265171 266229 . + . ID=gene-CCO34_RS08950;Name=CCO34_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08950;old_locus_tag=CCO34_08945 NZ_NPMD01000003.1 Protein Homology CDS 265171 266229 . + 0 ID=cds-WP_000475246.1;Parent=gene-CCO34_RS08950;Dbxref=GenBank:WP_000475246.1;Name=WP_000475246.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=CCO34_RS08950;product=methyl-accepting chemotaxis protein;protein_id=WP_000475246.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 266529 267941 . - . ID=gene-CCO34_RS08955;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=CCO34_RS08955;old_locus_tag=CCO34_08950 NZ_NPMD01000003.1 Protein Homology CDS 266529 267941 . - 0 ID=cds-WP_000190180.1;Parent=gene-CCO34_RS08955;Dbxref=GenBank:WP_000190180.1;Name=WP_000190180.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=CCO34_RS08955;product=glucuronate isomerase;protein_id=WP_000190180.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 267953 269425 . - . ID=gene-CCO34_RS08960;Name=CCO34_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08960;old_locus_tag=CCO34_08955 NZ_NPMD01000003.1 Protein Homology CDS 267953 269425 . - 0 ID=cds-WP_000437132.1;Parent=gene-CCO34_RS08960;Dbxref=GenBank:WP_000437132.1;Name=WP_000437132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=CCO34_RS08960;product=fructuronate reductase;protein_id=WP_000437132.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 269536 270720 . - . ID=gene-CCO34_RS08965;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=CCO34_RS08965;old_locus_tag=CCO34_08960 NZ_NPMD01000003.1 Protein Homology CDS 269536 270720 . - 0 ID=cds-WP_000815479.1;Parent=gene-CCO34_RS08965;Dbxref=GenBank:WP_000815479.1;Name=WP_000815479.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=CCO34_RS08965;product=mannonate dehydratase;protein_id=WP_000815479.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 271125 272429 . + . ID=gene-CCO34_RS08970;Name=CCO34_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08970;old_locus_tag=CCO34_08965 NZ_NPMD01000003.1 Protein Homology CDS 271125 272429 . + 0 ID=cds-WP_000784371.1;Parent=gene-CCO34_RS08970;Dbxref=GenBank:WP_000784371.1;Name=WP_000784371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=CCO34_RS08970;product=MFS transporter;protein_id=WP_000784371.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 272825 273703 . + . ID=gene-CCO34_RS08975;Name=CCO34_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08975;old_locus_tag=CCO34_08970 NZ_NPMD01000003.1 Protein Homology CDS 272825 273703 . + 0 ID=cds-WP_001137804.1;Parent=gene-CCO34_RS08975;Dbxref=GenBank:WP_001137804.1;Name=WP_001137804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=CCO34_RS08975;product=carbon-nitrogen hydrolase family protein;protein_id=WP_001137804.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 273742 274665 . + . ID=gene-CCO34_RS08980;Name=CCO34_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08980;old_locus_tag=CCO34_08975 NZ_NPMD01000003.1 Protein Homology CDS 273742 274665 . + 0 ID=cds-WP_000540891.1;Parent=gene-CCO34_RS08980;Dbxref=GenBank:WP_000540891.1;Name=WP_000540891.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=CCO34_RS08980;product=polysaccharide deacetylase family protein;protein_id=WP_000540891.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 275391 275873 . + . ID=gene-CCO34_RS08985;Name=CCO34_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08985;old_locus_tag=CCO34_08980 NZ_NPMD01000003.1 Protein Homology CDS 275391 275873 . + 0 ID=cds-WP_000338751.1;Parent=gene-CCO34_RS08985;Dbxref=GenBank:WP_000338751.1;Name=WP_000338751.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=CCO34_RS08985;product=Hcp family type VI secretion system effector;protein_id=WP_000338751.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 275873 276253 . + . ID=gene-CCO34_RS08990;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=CCO34_RS08990;old_locus_tag=CCO34_08985 NZ_NPMD01000003.1 Protein Homology CDS 275873 276253 . + 0 ID=cds-WP_000988938.1;Parent=gene-CCO34_RS08990;Dbxref=GenBank:WP_000988938.1;Name=WP_000988938.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=CCO34_RS08990;product=anti-adapter protein IraD;protein_id=WP_000988938.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 276389 277873 . - . ID=gene-CCO34_RS08995;Name=CCO34_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS08995;old_locus_tag=CCO34_08990 NZ_NPMD01000003.1 Protein Homology CDS 276389 277873 . - 0 ID=cds-WP_001286387.1;Parent=gene-CCO34_RS08995;Dbxref=GenBank:WP_001286387.1;Name=WP_001286387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=CCO34_RS08995;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_001286387.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 278035 279336 . + . ID=gene-CCO34_RS09000;Name=CCO34_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09000;old_locus_tag=CCO34_08995 NZ_NPMD01000003.1 Protein Homology CDS 278035 279336 . + 0 ID=cds-WP_001092814.1;Parent=gene-CCO34_RS09000;Dbxref=GenBank:WP_001092814.1;Name=WP_001092814.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=CCO34_RS09000;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092814.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 279351 279725 . + . ID=gene-CCO34_RS09005;Name=CCO34_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09005;old_locus_tag=CCO34_09000 NZ_NPMD01000003.1 Protein Homology CDS 279351 279725 . + 0 ID=cds-WP_000542980.1;Parent=gene-CCO34_RS09005;Dbxref=GenBank:WP_000542980.1;Name=WP_000542980.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=CCO34_RS09005;product=cupin domain-containing protein;protein_id=WP_000542980.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 279934 281433 . + . ID=gene-CCO34_RS09010;Name=CCO34_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09010;old_locus_tag=CCO34_09005 NZ_NPMD01000003.1 Protein Homology CDS 279934 281433 . + 0 ID=cds-WP_000475960.1;Parent=gene-CCO34_RS09010;Dbxref=GenBank:WP_000475960.1;Name=WP_000475960.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=CCO34_RS09010;product=APC family permease;protein_id=WP_000475960.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 281411 281968 . + . ID=gene-CCO34_RS09015;Name=CCO34_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09015;old_locus_tag=CCO34_09010 NZ_NPMD01000003.1 Protein Homology CDS 281411 281968 . + 0 ID=cds-WP_000100103.1;Parent=gene-CCO34_RS09015;Dbxref=GenBank:WP_000100103.1;Name=WP_000100103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=CCO34_RS09015;product=DUF3156 family protein;protein_id=WP_000100103.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 282073 282756 . - . ID=gene-CCO34_RS09020;Name=CCO34_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09020;old_locus_tag=CCO34_09015 NZ_NPMD01000003.1 Protein Homology CDS 282073 282756 . - 0 ID=cds-WP_001275354.1;Parent=gene-CCO34_RS09020;Dbxref=GenBank:WP_001275354.1;Name=WP_001275354.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=CCO34_RS09020;product=helix-turn-helix transcriptional regulator;protein_id=WP_001275354.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 283268 284452 . + . ID=gene-CCO34_RS09025;Name=CCO34_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09025;old_locus_tag=CCO34_09020 NZ_NPMD01000003.1 Protein Homology CDS 283268 284452 . + 0 ID=cds-WP_000933441.1;Parent=gene-CCO34_RS09025;Dbxref=GenBank:WP_000933441.1;Name=WP_000933441.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=CCO34_RS09025;product=anaerobic sulfatase maturase;protein_id=WP_000933441.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 284521 286260 . + . ID=gene-CCO34_RS09030;Name=CCO34_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09030;old_locus_tag=CCO34_09025 NZ_NPMD01000003.1 Protein Homology CDS 284521 286260 . + 0 ID=cds-WP_000712461.1;Parent=gene-CCO34_RS09030;Dbxref=GenBank:WP_000712461.1;Name=WP_000712461.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=CCO34_RS09030;product=arylsulfatase;protein_id=WP_000712461.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 286308 287186 . - . ID=gene-CCO34_RS09035;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=CCO34_RS09035;old_locus_tag=CCO34_09030 NZ_NPMD01000003.1 Protein Homology CDS 286308 287186 . - 0 ID=cds-WP_000423175.1;Parent=gene-CCO34_RS09035;Dbxref=GenBank:WP_000423175.1;Name=WP_000423175.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=CCO34_RS09035;product=itaconate degradation transcriptional regulator RipR;protein_id=WP_000423175.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 287278 288120 . + . ID=gene-CCO34_RS09040;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=CCO34_RS09040;old_locus_tag=CCO34_09035 NZ_NPMD01000003.1 Protein Homology CDS 287278 288120 . + 0 ID=cds-WP_001112897.1;Parent=gene-CCO34_RS09040;Dbxref=GenBank:WP_001112897.1;Name=WP_001112897.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=CCO34_RS09040;product=itaconate degradation C-C-lyase RipC;protein_id=WP_001112897.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 288144 288671 . + . ID=gene-CCO34_RS09045;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=CCO34_RS09045;old_locus_tag=CCO34_09040 NZ_NPMD01000003.1 Protein Homology CDS 288144 288671 . + 0 ID=cds-WP_001094307.1;Parent=gene-CCO34_RS09045;Dbxref=GenBank:WP_001094307.1;Name=WP_001094307.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=CCO34_RS09045;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=WP_001094307.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 288696 290021 . + . ID=gene-CCO34_RS09050;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=CCO34_RS09050;old_locus_tag=CCO34_09045 NZ_NPMD01000003.1 Protein Homology CDS 288696 290021 . + 0 ID=cds-WP_000982337.1;Parent=gene-CCO34_RS09050;Dbxref=GenBank:WP_000982337.1;Name=WP_000982337.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=CCO34_RS09050;product=itaconate CoA-transferase RipA/Ict;protein_id=WP_000982337.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 290086 290466 . + . ID=gene-CCO34_RS09055;Name=CCO34_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09055;old_locus_tag=CCO34_09050 NZ_NPMD01000003.1 Protein Homology CDS 290086 290466 . + 0 ID=cds-WP_000582669.1;Parent=gene-CCO34_RS09055;Dbxref=GenBank:WP_000582669.1;Name=WP_000582669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=CCO34_RS09055;product=VOC family protein;protein_id=WP_000582669.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 290873 291166 . + . ID=gene-CCO34_RS09060;Name=CCO34_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09060;old_locus_tag=CCO34_09055 NZ_NPMD01000003.1 Protein Homology CDS 290873 291166 . + 0 ID=cds-WP_001110449.1;Parent=gene-CCO34_RS09060;Dbxref=GenBank:WP_001110449.1;Name=WP_001110449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=CCO34_RS09060;product=DUF1778 domain-containing protein;protein_id=WP_001110449.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 291163 291654 . + . ID=gene-CCO34_RS09065;Name=CCO34_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09065;old_locus_tag=CCO34_09060 NZ_NPMD01000003.1 Protein Homology CDS 291163 291654 . + 0 ID=cds-WP_023228761.1;Parent=gene-CCO34_RS09065;Dbxref=GenBank:WP_023228761.1;Name=WP_023228761.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=CCO34_RS09065;product=GNAT family N-acetyltransferase;protein_id=WP_023228761.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 291741 292439 . + . ID=gene-CCO34_RS09070;Name=CCO34_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09070;old_locus_tag=CCO34_09065 NZ_NPMD01000003.1 Protein Homology CDS 291741 292439 . + 0 ID=cds-WP_000966916.1;Parent=gene-CCO34_RS09070;Dbxref=GenBank:WP_000966916.1;Name=WP_000966916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966916.1;locus_tag=CCO34_RS09070;product=hypothetical protein;protein_id=WP_000966916.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 292582 294282 . - . ID=gene-CCO34_RS09075;Name=CCO34_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09075;old_locus_tag=CCO34_09070 NZ_NPMD01000003.1 GeneMarkS-2+ CDS 292582 294282 . - 0 ID=cds-WP_023228760.1;Parent=gene-CCO34_RS09075;Dbxref=GenBank:WP_023228760.1;Name=WP_023228760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS09075;product=hypothetical protein;protein_id=WP_023228760.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 294279 296192 . - . ID=gene-CCO34_RS09080;Name=CCO34_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09080;old_locus_tag=CCO34_09075 NZ_NPMD01000003.1 Protein Homology CDS 294279 296192 . - 0 ID=cds-WP_000999377.1;Parent=gene-CCO34_RS09080;Dbxref=GenBank:WP_000999377.1;Name=WP_000999377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999377.1;locus_tag=CCO34_RS09080;product=hypothetical protein;protein_id=WP_000999377.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 296707 297168 . + . ID=gene-CCO34_RS09090;Name=CCO34_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09090;old_locus_tag=CCO34_09085 NZ_NPMD01000003.1 Protein Homology CDS 296707 297168 . + 0 ID=cds-WP_000246402.1;Parent=gene-CCO34_RS09090;Dbxref=GenBank:WP_000246402.1;Name=WP_000246402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822469.1;locus_tag=CCO34_RS09090;product=hypothetical protein;protein_id=WP_000246402.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 297165 297404 . + . ID=gene-CCO34_RS09095;Name=CCO34_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09095;old_locus_tag=CCO34_09090 NZ_NPMD01000003.1 Protein Homology CDS 297165 297404 . + 0 ID=cds-WP_000983667.1;Parent=gene-CCO34_RS09095;Dbxref=GenBank:WP_000983667.1;Name=WP_000983667.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=CCO34_RS09095;product=helix-turn-helix domain-containing protein;protein_id=WP_000983667.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 297497 298516 . - . ID=gene-CCO34_RS09100;Name=CCO34_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09100;old_locus_tag=CCO34_09095 NZ_NPMD01000003.1 Protein Homology CDS 297497 298516 . - 0 ID=cds-WP_024136539.1;Parent=gene-CCO34_RS09100;Dbxref=GenBank:WP_024136539.1;Name=WP_024136539.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000516586.1;locus_tag=CCO34_RS09100;product=ParA family protein;protein_id=WP_024136539.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 298628 299380 . - . ID=gene-CCO34_RS25540;Name=CCO34_RS25540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25540 NZ_NPMD01000003.1 GeneMarkS-2+ CDS 298628 299380 . - 0 ID=cds-WP_023228759.1;Parent=gene-CCO34_RS25540;Dbxref=GenBank:WP_023228759.1;Name=WP_023228759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25540;product=hypothetical protein;protein_id=WP_023228759.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 299614 300501 . + . ID=gene-CCO34_RS09115;Name=CCO34_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09115;old_locus_tag=CCO34_09110 NZ_NPMD01000003.1 Protein Homology CDS 299614 300501 . + 0 ID=cds-WP_000511768.1;Parent=gene-CCO34_RS09115;Dbxref=GenBank:WP_000511768.1;Name=WP_000511768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511768.1;locus_tag=CCO34_RS09115;product=integrase domain-containing protein;protein_id=WP_000511768.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 301082 302341 . - . ID=gene-CCO34_RS09120;Name=CCO34_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09120;old_locus_tag=CCO34_09115 NZ_NPMD01000003.1 Protein Homology CDS 301082 302341 . - 0 ID=cds-WP_000954538.1;Parent=gene-CCO34_RS09120;Dbxref=GenBank:WP_000954538.1;Name=WP_000954538.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954536.1;locus_tag=CCO34_RS09120;product=tyrosine-type recombinase/integrase;protein_id=WP_000954538.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 302501 302576 . - . ID=gene-CCO34_RS09125;Name=CCO34_RS09125;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS09125;old_locus_tag=CCO34_09120 NZ_NPMD01000003.1 tRNAscan-SE tRNA 302501 302576 . - . ID=rna-CCO34_RS09125;Parent=gene-CCO34_RS09125;anticodon=(pos:complement(302541..302543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS09125;product=tRNA-Phe NZ_NPMD01000003.1 tRNAscan-SE exon 302501 302576 . - . ID=exon-CCO34_RS09125-1;Parent=rna-CCO34_RS09125;anticodon=(pos:complement(302541..302543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS09125;product=tRNA-Phe NZ_NPMD01000003.1 RefSeq gene 302682 303389 . - . ID=gene-CCO34_RS09130;Name=CCO34_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09130;old_locus_tag=CCO34_09125 NZ_NPMD01000003.1 Protein Homology CDS 302682 303389 . - 0 ID=cds-WP_000234466.1;Parent=gene-CCO34_RS09130;Dbxref=GenBank:WP_000234466.1;Name=WP_000234466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=CCO34_RS09130;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 303814 305949 . + . ID=gene-CCO34_RS09140;Name=CCO34_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09140;old_locus_tag=CCO34_09135 NZ_NPMD01000003.1 Protein Homology CDS 303814 305949 . + 0 ID=cds-WP_000839728.1;Parent=gene-CCO34_RS09140;Dbxref=GenBank:WP_000839728.1;Name=WP_000839728.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=CCO34_RS09140;product=ornithine decarboxylase;protein_id=WP_000839728.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 306011 307267 . - . ID=gene-CCO34_RS09145;Name=CCO34_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09145;old_locus_tag=CCO34_09140 NZ_NPMD01000003.1 Protein Homology CDS 306011 307267 . - 0 ID=cds-WP_001049803.1;Parent=gene-CCO34_RS09145;Dbxref=GenBank:WP_001049803.1;Name=WP_001049803.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=CCO34_RS09145;product=nucleoside permease;protein_id=WP_001049803.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 307484 308569 . - . ID=gene-CCO34_RS09150;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=CCO34_RS09150;old_locus_tag=CCO34_09145 NZ_NPMD01000003.1 Protein Homology CDS 307484 308569 . - 0 ID=cds-WP_000976289.1;Parent=gene-CCO34_RS09150;Dbxref=GenBank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=CCO34_RS09150;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 308682 308957 . - . ID=gene-CCO34_RS09155;Name=CCO34_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09155;old_locus_tag=CCO34_09150 NZ_NPMD01000003.1 Protein Homology CDS 308682 308957 . - 0 ID=cds-WP_000091706.1;Parent=gene-CCO34_RS09155;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=CCO34_RS09155;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 308985 310037 . - . ID=gene-CCO34_RS09160;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CCO34_RS09160;old_locus_tag=CCO34_09155 NZ_NPMD01000003.1 Protein Homology CDS 308985 310037 . - 0 ID=cds-WP_001148948.1;Parent=gene-CCO34_RS09160;Dbxref=GenBank:WP_001148948.1;Name=WP_001148948.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=CCO34_RS09160;product=A/G-specific adenine glycosylase;protein_id=WP_001148948.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 310192 310911 . + . ID=gene-CCO34_RS09170;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CCO34_RS09170;old_locus_tag=CCO34_09165 NZ_NPMD01000003.1 Protein Homology CDS 310192 310911 . + 0 ID=cds-WP_000786894.1;Parent=gene-CCO34_RS09170;Dbxref=GenBank:WP_000786894.1;Name=WP_000786894.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=CCO34_RS09170;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786894.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 310911 311237 . + . ID=gene-CCO34_RS09175;Name=CCO34_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09175;old_locus_tag=CCO34_09170 NZ_NPMD01000003.1 Protein Homology CDS 310911 311237 . + 0 ID=cds-WP_001107574.1;Parent=gene-CCO34_RS09175;Dbxref=GenBank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=CCO34_RS09175;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 311287 312006 . + . ID=gene-CCO34_RS09180;Name=CCO34_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09180;old_locus_tag=CCO34_09175 NZ_NPMD01000003.1 Protein Homology CDS 311287 312006 . + 0 ID=cds-WP_000984837.1;Parent=gene-CCO34_RS09180;Dbxref=GenBank:WP_000984837.1;Name=WP_000984837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=CCO34_RS09180;product=DUF2884 domain-containing protein;protein_id=WP_000984837.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 312195 313241 . + . ID=gene-CCO34_RS09185;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=CCO34_RS09185;old_locus_tag=CCO34_09180 NZ_NPMD01000003.1 Protein Homology CDS 312195 313241 . + 0 ID=cds-WP_000394189.1;Parent=gene-CCO34_RS09185;Dbxref=GenBank:WP_000394189.1;Name=WP_000394189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=CCO34_RS09185;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 313374 314381 . + . ID=gene-CCO34_RS09190;Name=CCO34_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09190;old_locus_tag=CCO34_09185 NZ_NPMD01000003.1 Protein Homology CDS 313374 314381 . + 0 ID=cds-WP_000252188.1;Parent=gene-CCO34_RS09190;Dbxref=GenBank:WP_000252188.1;Name=WP_000252188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=CCO34_RS09190;product=DUF1202 domain-containing protein;protein_id=WP_000252188.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 314473 315609 . - . ID=gene-CCO34_RS09195;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CCO34_RS09195;old_locus_tag=CCO34_09190 NZ_NPMD01000003.1 Protein Homology CDS 314473 315609 . - 0 ID=cds-WP_001096532.1;Parent=gene-CCO34_RS09195;Dbxref=GenBank:WP_001096532.1;Name=WP_001096532.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=CCO34_RS09195;product=radical SAM family heme chaperone HemW;protein_id=WP_001096532.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 315602 316195 . - . ID=gene-CCO34_RS09200;Name=CCO34_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09200;old_locus_tag=CCO34_09195 NZ_NPMD01000003.1 Protein Homology CDS 315602 316195 . - 0 ID=cds-WP_001174764.1;Parent=gene-CCO34_RS09200;Dbxref=GenBank:WP_001174764.1;Name=WP_001174764.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=CCO34_RS09200;product=XTP/dITP diphosphatase;protein_id=WP_001174764.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 316203 316493 . - . ID=gene-CCO34_RS09205;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=CCO34_RS09205;old_locus_tag=CCO34_09200 NZ_NPMD01000003.1 Protein Homology CDS 316203 316493 . - 0 ID=cds-WP_001277205.1;Parent=gene-CCO34_RS09205;Dbxref=GenBank:WP_001277205.1;Name=WP_001277205.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=CCO34_RS09205;product=DUF167 family protein YggU;protein_id=WP_001277205.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 316490 317056 . - . ID=gene-CCO34_RS09210;Name=CCO34_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09210;old_locus_tag=CCO34_09205 NZ_NPMD01000003.1 Protein Homology CDS 316490 317056 . - 0 ID=cds-WP_001094848.1;Parent=gene-CCO34_RS09210;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=CCO34_RS09210;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 317075 317779 . - . ID=gene-CCO34_RS09215;Name=CCO34_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09215;old_locus_tag=CCO34_09210 NZ_NPMD01000003.1 Protein Homology CDS 317075 317779 . - 0 ID=cds-WP_000997812.1;Parent=gene-CCO34_RS09215;Dbxref=GenBank:WP_000997812.1;Name=WP_000997812.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=CCO34_RS09215;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997812.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 317797 318777 . + . ID=gene-CCO34_RS09220;Name=CCO34_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09220;old_locus_tag=CCO34_09215 NZ_NPMD01000003.1 Protein Homology CDS 317797 318777 . + 0 ID=cds-WP_001055642.1;Parent=gene-CCO34_RS09220;Dbxref=GenBank:WP_001055642.1;Name=WP_001055642.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=CCO34_RS09220;product=type IV pilus twitching motility protein PilT;protein_id=WP_001055642.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 318909 319595 . + . ID=gene-CCO34_RS09225;Name=CCO34_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09225;old_locus_tag=CCO34_09220 NZ_NPMD01000003.1 Protein Homology CDS 318909 319595 . + 0 ID=cds-WP_000098322.1;Parent=gene-CCO34_RS09225;Dbxref=GenBank:WP_000098322.1;Name=WP_000098322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=CCO34_RS09225;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_000098322.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 319642 320058 . - . ID=gene-CCO34_RS09230;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CCO34_RS09230;old_locus_tag=CCO34_09225 NZ_NPMD01000003.1 Protein Homology CDS 319642 320058 . - 0 ID=cds-WP_001285491.1;Parent=gene-CCO34_RS09230;Dbxref=GenBank:WP_001285491.1;Name=WP_001285491.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=CCO34_RS09230;product=Holliday junction resolvase RuvX;protein_id=WP_001285491.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 320058 320621 . - . ID=gene-CCO34_RS09235;Name=CCO34_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09235;old_locus_tag=CCO34_09230 NZ_NPMD01000003.1 Protein Homology CDS 320058 320621 . - 0 ID=cds-WP_001053171.1;Parent=gene-CCO34_RS09235;Dbxref=GenBank:WP_001053171.1;Name=WP_001053171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=CCO34_RS09235;product=YqgE/AlgH family protein;protein_id=WP_001053171.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 320837 321784 . - . ID=gene-CCO34_RS09240;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=CCO34_RS09240;old_locus_tag=CCO34_09235 NZ_NPMD01000003.1 Protein Homology CDS 320837 321784 . - 0 ID=cds-WP_000593248.1;Parent=gene-CCO34_RS09240;Dbxref=GenBank:WP_000593248.1;Name=WP_000593248.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=CCO34_RS09240;product=glutathione synthase;protein_id=WP_000593248.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 321804 322535 . - . ID=gene-CCO34_RS09245;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=CCO34_RS09245;old_locus_tag=CCO34_09240 NZ_NPMD01000003.1 Protein Homology CDS 321804 322535 . - 0 ID=cds-WP_001222488.1;Parent=gene-CCO34_RS09245;Dbxref=GenBank:WP_001222488.1;Name=WP_001222488.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=CCO34_RS09245;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222488.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 322612 323319 . - . ID=gene-CCO34_RS09250;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=CCO34_RS09250;old_locus_tag=CCO34_09245 NZ_NPMD01000003.1 Protein Homology CDS 322612 323319 . - 0 ID=cds-WP_000286132.1;Parent=gene-CCO34_RS09250;Dbxref=GenBank:WP_000286132.1;Name=WP_000286132.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=CCO34_RS09250;product=deoxyribonuclease I;protein_id=WP_000286132.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 323415 323912 . - . ID=gene-CCO34_RS09255;Name=CCO34_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09255;old_locus_tag=CCO34_09250 NZ_NPMD01000003.1 Protein Homology CDS 323415 323912 . - 0 ID=cds-WP_000856775.1;Parent=gene-CCO34_RS09255;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=CCO34_RS09255;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 323991 325385 . - . ID=gene-CCO34_RS09260;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=CCO34_RS09260;old_locus_tag=CCO34_09255 NZ_NPMD01000003.1 Protein Homology CDS 323991 325385 . - 0 ID=cds-WP_001113171.1;Parent=gene-CCO34_RS09260;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=CCO34_RS09260;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 325878 327032 . - . ID=gene-CCO34_RS09265;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CCO34_RS09265;old_locus_tag=CCO34_09260 NZ_NPMD01000003.1 Protein Homology CDS 325878 327032 . - 0 ID=cds-WP_001062140.1;Parent=gene-CCO34_RS09265;Dbxref=GenBank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=CCO34_RS09265;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 327088 327387 . + . ID=gene-CCO34_RS09270;Name=CCO34_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09270;old_locus_tag=CCO34_09265 NZ_NPMD01000003.1 GeneMarkS-2+ CDS 327088 327387 . + 0 ID=cds-WP_001540882.1;Parent=gene-CCO34_RS09270;Dbxref=GenBank:WP_001540882.1;Name=WP_001540882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS09270;product=hypothetical protein;protein_id=WP_001540882.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 327447 327596 . + . ID=gene-CCO34_RS26040;Name=CCO34_RS26040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26040 NZ_NPMD01000003.1 Protein Homology CDS 327447 327596 . + 0 ID=cds-WP_001751809.1;Parent=gene-CCO34_RS26040;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=CCO34_RS26040;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 327682 327813 . + . ID=gene-CCO34_RS09280;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=CCO34_RS09280;old_locus_tag=CCO34_09275 NZ_NPMD01000003.1 Protein Homology CDS 327682 327813 . + 0 ID=cds-WP_000729109.1;Parent=gene-CCO34_RS09280;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=CCO34_RS09280;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 327822 329798 . + . ID=gene-CCO34_RS09285;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=CCO34_RS09285;old_locus_tag=CCO34_09280 NZ_NPMD01000003.1 Protein Homology CDS 327822 329798 . + 0 ID=cds-WP_001278575.1;Parent=gene-CCO34_RS09285;Dbxref=GenBank:WP_001278575.1;Name=WP_001278575.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=CCO34_RS09285;product=biosynthetic arginine decarboxylase;protein_id=WP_001278575.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 329942 330673 . + . ID=gene-CCO34_RS09290;Name=CCO34_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09290;old_locus_tag=CCO34_09285 NZ_NPMD01000003.1 Protein Homology CDS 329942 330673 . + 0 ID=cds-WP_000032795.1;Parent=gene-CCO34_RS09290;Dbxref=GenBank:WP_000032795.1;Name=WP_000032795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=CCO34_RS09290;product=hypothetical protein;protein_id=WP_000032795.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 330827 331627 . + . ID=gene-CCO34_RS09295;Name=CCO34_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09295;old_locus_tag=CCO34_09290 NZ_NPMD01000003.1 Protein Homology CDS 330827 331627 . + 0 ID=cds-WP_001576357.1;Parent=gene-CCO34_RS09295;Dbxref=GenBank:WP_001576357.1;Name=WP_001576357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=CCO34_RS09295;product=FadR/GntR family transcriptional regulator;protein_id=WP_001576357.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 331942 332019 . - . ID=gene-CCO34_RS26090;Name=CCO34_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26090;old_locus_tag=CCO34_09300 NZ_NPMD01000003.1 Protein Homology CDS 331942 332019 . - 0 ID=cds-WP_023228383.1;Parent=gene-CCO34_RS26090;Dbxref=GenBank:WP_023228383.1;Name=WP_023228383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.6;locus_tag=CCO34_RS26090;product=hypothetical protein;protein_id=WP_023228383.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 332860 334332 . + . ID=gene-CCO34_RS09310;Name=CCO34_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09310;old_locus_tag=CCO34_09305 NZ_NPMD01000003.1 Protein Homology CDS 332860 334332 . + 0 ID=cds-WP_000379520.1;Parent=gene-CCO34_RS09310;Dbxref=GenBank:WP_000379520.1;Name=WP_000379520.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=CCO34_RS09310;product=mannitol dehydrogenase family protein;protein_id=WP_000379520.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 334335 335351 . + . ID=gene-CCO34_RS09315;Name=CCO34_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09315;old_locus_tag=CCO34_09310 NZ_NPMD01000003.1 Protein Homology CDS 334335 335351 . + 0 ID=cds-WP_000853913.1;Parent=gene-CCO34_RS09315;Dbxref=GenBank:WP_000853913.1;Name=WP_000853913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=CCO34_RS09315;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000853913.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 335365 336372 . + . ID=gene-CCO34_RS09320;Name=CCO34_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09320;old_locus_tag=CCO34_09315 NZ_NPMD01000003.1 Protein Homology CDS 335365 336372 . + 0 ID=cds-WP_000104231.1;Parent=gene-CCO34_RS09320;Dbxref=GenBank:WP_000104231.1;Name=WP_000104231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=CCO34_RS09320;product=Ldh family oxidoreductase;protein_id=WP_000104231.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 336411 336905 . + . ID=gene-CCO34_RS09325;Name=CCO34_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09325;old_locus_tag=CCO34_09320 NZ_NPMD01000003.1 Protein Homology CDS 336411 336905 . + 0 ID=cds-WP_000965541.1;Parent=gene-CCO34_RS09325;Dbxref=GenBank:WP_000965541.1;Name=WP_000965541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839091.1;locus_tag=CCO34_RS09325;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000965541.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 337098 338054 . + . ID=gene-CCO34_RS09330;Name=CCO34_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09330;old_locus_tag=CCO34_09325 NZ_NPMD01000003.1 Protein Homology CDS 337098 338054 . + 0 ID=cds-WP_077906078.1;Parent=gene-CCO34_RS09330;Dbxref=GenBank:WP_077906078.1;Name=WP_077906078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=CCO34_RS09330;product=alpha/beta fold hydrolase;protein_id=WP_077906078.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 338259 339179 . + . ID=gene-CCO34_RS09335;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=CCO34_RS09335;old_locus_tag=CCO34_09330 NZ_NPMD01000003.1 Protein Homology CDS 338259 339179 . + 0 ID=cds-WP_000105550.1;Parent=gene-CCO34_RS09335;Dbxref=GenBank:WP_000105550.1;Name=WP_000105550.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=CCO34_RS09335;product=agmatinase;protein_id=WP_000105550.1;transl_table=11 NZ_NPMD01000003.1 RefSeq pseudogene 339183 339267 . + . ID=gene-CCO34_RS26195;Name=CCO34_RS26195;end_range=339267,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26195;partial=true;pseudo=true;start_range=.,339183 NZ_NPMD01000003.1 Protein Homology CDS 339183 339267 . + 0 ID=cds-CCO34_RS26195;Parent=gene-CCO34_RS26195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=339267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO34_RS26195;partial=true;product=hypothetical protein;pseudo=true;start_range=.,339183;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 339280 340038 . - . ID=gene-CCO34_RS09340;Name=CCO34_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09340;old_locus_tag=CCO34_09335 NZ_NPMD01000003.1 Protein Homology CDS 339280 340038 . - 0 ID=cds-WP_000701830.1;Parent=gene-CCO34_RS09340;Dbxref=GenBank:WP_000701830.1;Name=WP_000701830.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=CCO34_RS09340;product=M48 family metallopeptidase;protein_id=WP_000701830.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 340314 342305 . + . ID=gene-CCO34_RS09345;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO34_RS09345;old_locus_tag=CCO34_09340 NZ_NPMD01000003.1 Protein Homology CDS 340314 342305 . + 0 ID=cds-WP_000098652.1;Parent=gene-CCO34_RS09345;Dbxref=GenBank:WP_000098652.1;Name=WP_000098652.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=CCO34_RS09345;product=transketolase;protein_id=WP_000098652.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 342348 343004 . - . ID=gene-CCO34_RS09350;Name=CCO34_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09350;old_locus_tag=CCO34_09345 NZ_NPMD01000003.1 Protein Homology CDS 342348 343004 . - 0 ID=cds-WP_000956924.1;Parent=gene-CCO34_RS09350;Dbxref=GenBank:WP_000956924.1;Name=WP_000956924.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=CCO34_RS09350;product=ABC transporter ATP-binding protein;protein_id=WP_000956924.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 342998 343675 . - . ID=gene-CCO34_RS09355;Name=CCO34_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09355;old_locus_tag=CCO34_09350 NZ_NPMD01000003.1 Protein Homology CDS 342998 343675 . - 0 ID=cds-WP_001517914.1;Parent=gene-CCO34_RS09355;Dbxref=GenBank:WP_001517914.1;Name=WP_001517914.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=CCO34_RS09355;product=ABC transporter ATP-binding protein;protein_id=WP_001517914.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 343663 344370 . - . ID=gene-CCO34_RS09360;Name=CCO34_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09360;old_locus_tag=CCO34_09355 NZ_NPMD01000003.1 Protein Homology CDS 343663 344370 . - 0 ID=cds-WP_000553274.1;Parent=gene-CCO34_RS09360;Dbxref=GenBank:WP_000553274.1;Name=WP_000553274.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=CCO34_RS09360;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_000553274.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 344371 344949 . - . ID=gene-CCO34_RS09365;Name=CCO34_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09365;old_locus_tag=CCO34_09360 NZ_NPMD01000003.1 Protein Homology CDS 344371 344949 . - 0 ID=cds-WP_000124001.1;Parent=gene-CCO34_RS09365;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=CCO34_RS09365;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 344975 345400 . - . ID=gene-CCO34_RS09370;Name=CCO34_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09370;old_locus_tag=CCO34_09365 NZ_NPMD01000003.1 Protein Homology CDS 344975 345400 . - 0 ID=cds-WP_000218564.1;Parent=gene-CCO34_RS09370;Dbxref=GenBank:WP_000218564.1;Name=WP_000218564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=CCO34_RS09370;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218564.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 345774 346820 . + . ID=gene-CCO34_RS09380;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=CCO34_RS09380;old_locus_tag=CCO34_09375 NZ_NPMD01000003.1 Protein Homology CDS 345774 346820 . + 0 ID=cds-WP_000218338.1;Parent=gene-CCO34_RS09380;Dbxref=GenBank:WP_000218338.1;Name=WP_000218338.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=CCO34_RS09380;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218338.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 346842 348005 . + . ID=gene-CCO34_RS09385;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CCO34_RS09385;old_locus_tag=CCO34_09380 NZ_NPMD01000003.1 Protein Homology CDS 346842 348005 . + 0 ID=cds-WP_000111274.1;Parent=gene-CCO34_RS09385;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=CCO34_RS09385;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 348107 349186 . + . ID=gene-CCO34_RS09390;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=CCO34_RS09390;old_locus_tag=CCO34_09385 NZ_NPMD01000003.1 Protein Homology CDS 348107 349186 . + 0 ID=cds-WP_000034386.1;Parent=gene-CCO34_RS09390;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=CCO34_RS09390;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 349419 350279 . + . ID=gene-CCO34_RS09395;Name=CCO34_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09395;old_locus_tag=CCO34_09390 NZ_NPMD01000003.1 Protein Homology CDS 349419 350279 . + 0 ID=cds-WP_000389829.1;Parent=gene-CCO34_RS09395;Dbxref=GenBank:WP_000389829.1;Name=WP_000389829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=CCO34_RS09395;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389829.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 350480 351115 . + . ID=gene-CCO34_RS09400;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=CCO34_RS09400;old_locus_tag=CCO34_09395 NZ_NPMD01000003.1 Protein Homology CDS 350480 351115 . + 0 ID=cds-WP_000626863.1;Parent=gene-CCO34_RS09400;Dbxref=GenBank:WP_000626863.1;Name=WP_000626863.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=CCO34_RS09400;product=arginine exporter ArgO;protein_id=WP_000626863.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 351209 351955 . + . ID=gene-CCO34_RS09405;Name=CCO34_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09405;old_locus_tag=CCO34_09400 NZ_NPMD01000003.1 Protein Homology CDS 351209 351955 . + 0 ID=cds-WP_000669854.1;Parent=gene-CCO34_RS09405;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=CCO34_RS09405;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 352221 353114 . - . ID=gene-CCO34_RS09415;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=CCO34_RS09415;old_locus_tag=CCO34_09410 NZ_NPMD01000003.1 Protein Homology CDS 352221 353114 . - 0 ID=cds-WP_000828345.1;Parent=gene-CCO34_RS09415;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=CCO34_RS09415;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 353268 353927 . + . ID=gene-CCO34_RS09420;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CCO34_RS09420;old_locus_tag=CCO34_09415 NZ_NPMD01000003.1 Protein Homology CDS 353268 353927 . + 0 ID=cds-WP_000189741.1;Parent=gene-CCO34_RS09420;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=CCO34_RS09420;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 354194 355426 . + . ID=gene-CCO34_RS09425;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CCO34_RS09425;old_locus_tag=CCO34_09420 NZ_NPMD01000003.1 Protein Homology CDS 354194 355426 . + 0 ID=cds-WP_001151627.1;Parent=gene-CCO34_RS09425;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=CCO34_RS09425;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 355807 356403 . - . ID=gene-CCO34_RS09430;Name=CCO34_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09430;old_locus_tag=CCO34_09425 NZ_NPMD01000003.1 Protein Homology CDS 355807 356403 . - 0 ID=cds-WP_001531806.1;Parent=gene-CCO34_RS09430;Dbxref=GenBank:WP_001531806.1;Name=WP_001531806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=CCO34_RS09430;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_001531806.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 356424 356607 . - . ID=gene-CCO34_RS09435;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CCO34_RS09435;old_locus_tag=CCO34_09430 NZ_NPMD01000003.1 cmsearch ncRNA 356424 356607 . - . ID=rna-CCO34_RS09435;Parent=gene-CCO34_RS09435;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS09435;product=6S RNA NZ_NPMD01000003.1 cmsearch exon 356424 356607 . - . ID=exon-CCO34_RS09435-1;Parent=rna-CCO34_RS09435;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS09435;product=6S RNA NZ_NPMD01000003.1 RefSeq gene 356649 356978 . - . ID=gene-CCO34_RS09440;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CCO34_RS09440;old_locus_tag=CCO34_09435 NZ_NPMD01000003.1 Protein Homology CDS 356649 356978 . - 0 ID=cds-WP_001276011.1;Parent=gene-CCO34_RS09440;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=CCO34_RS09440;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 357145 357723 . + . ID=gene-CCO34_RS09450;Name=CCO34_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09450;old_locus_tag=CCO34_09445 NZ_NPMD01000003.1 Protein Homology CDS 357145 357723 . + 0 ID=cds-WP_000027236.1;Parent=gene-CCO34_RS09450;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=CCO34_RS09450;product=YecA family protein;protein_id=WP_000027236.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 357749 359065 . + . ID=gene-CCO34_RS09455;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=CCO34_RS09455;old_locus_tag=CCO34_09450 NZ_NPMD01000003.1 Protein Homology CDS 357749 359065 . + 0 ID=cds-WP_000193681.1;Parent=gene-CCO34_RS09455;Dbxref=GenBank:WP_000193681.1;Name=WP_000193681.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=CCO34_RS09455;product=Xaa-Pro aminopeptidase;protein_id=WP_000193681.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 359062 360240 . + . ID=gene-CCO34_RS09460;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=CCO34_RS09460;old_locus_tag=CCO34_09455 NZ_NPMD01000003.1 Protein Homology CDS 359062 360240 . + 0 ID=cds-WP_000111142.1;Parent=gene-CCO34_RS09460;Dbxref=GenBank:WP_000111142.1;Name=WP_000111142.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=CCO34_RS09460;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111142.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 360365 361567 . + . ID=gene-CCO34_RS09465;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=CCO34_RS09465;old_locus_tag=CCO34_09460 NZ_NPMD01000003.1 Protein Homology CDS 360365 361567 . + 0 ID=cds-WP_001192144.1;Parent=gene-CCO34_RS09465;Dbxref=GenBank:WP_001192144.1;Name=WP_001192144.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=CCO34_RS09465;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192144.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 362022 363116 . + . ID=gene-CCO34_RS09470;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CCO34_RS09470;old_locus_tag=CCO34_09465 NZ_NPMD01000003.1 Protein Homology CDS 362022 363116 . + 0 ID=cds-WP_000068733.1;Parent=gene-CCO34_RS09470;Dbxref=GenBank:WP_000068733.1;Name=WP_000068733.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=CCO34_RS09470;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068733.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 363142 363531 . + . ID=gene-CCO34_RS09475;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CCO34_RS09475;old_locus_tag=CCO34_09470 NZ_NPMD01000003.1 Protein Homology CDS 363142 363531 . + 0 ID=cds-WP_001295377.1;Parent=gene-CCO34_RS09475;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=CCO34_RS09475;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 363694 366567 . + . ID=gene-CCO34_RS09480;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=CCO34_RS09480;old_locus_tag=CCO34_09475 NZ_NPMD01000003.1 Protein Homology CDS 363694 366567 . + 0 ID=cds-WP_000194976.1;Parent=gene-CCO34_RS09480;Dbxref=GenBank:WP_000194976.1;Name=WP_000194976.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=CCO34_RS09480;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_000194976.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 367023 367916 . + . ID=gene-CCO34_RS09490;Name=CCO34_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09490;old_locus_tag=CCO34_09485 NZ_NPMD01000003.1 Protein Homology CDS 367023 367916 . + 0 ID=cds-WP_000819375.1;Parent=gene-CCO34_RS09490;Dbxref=GenBank:WP_000819375.1;Name=WP_000819375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=CCO34_RS09490;product=transporter;protein_id=WP_000819375.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 367964 369397 . - . ID=gene-CCO34_RS09495;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=CCO34_RS09495;old_locus_tag=CCO34_09490 NZ_NPMD01000003.1 Protein Homology CDS 367964 369397 . - 0 ID=cds-WP_001230141.1;Parent=gene-CCO34_RS09495;Dbxref=GenBank:WP_001230141.1;Name=WP_001230141.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=CCO34_RS09495;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001230141.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 369556 369867 . + . ID=gene-CCO34_RS09500;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=CCO34_RS09500;old_locus_tag=CCO34_09495 NZ_NPMD01000003.1 Protein Homology CDS 369556 369867 . + 0 ID=cds-WP_001182976.1;Parent=gene-CCO34_RS09500;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=CCO34_RS09500;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 370031 370690 . + . ID=gene-CCO34_RS09505;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CCO34_RS09505;old_locus_tag=CCO34_09500 NZ_NPMD01000003.1 Protein Homology CDS 370031 370690 . + 0 ID=cds-WP_000250292.1;Parent=gene-CCO34_RS09505;Dbxref=GenBank:WP_000250292.1;Name=WP_000250292.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=CCO34_RS09505;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250292.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 370806 371786 . - . ID=gene-CCO34_RS09515;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=CCO34_RS09515;old_locus_tag=CCO34_09510 NZ_NPMD01000003.1 Protein Homology CDS 370806 371786 . - 0 ID=cds-WP_000874172.1;Parent=gene-CCO34_RS09515;Dbxref=GenBank:WP_000874172.1;Name=WP_000874172.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=CCO34_RS09515;product=tRNA-modifying protein YgfZ;protein_id=WP_000874172.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 372036 372302 . + . ID=gene-CCO34_RS09525;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=CCO34_RS09525;old_locus_tag=CCO34_09520 NZ_NPMD01000003.1 Protein Homology CDS 372036 372302 . + 0 ID=cds-WP_000351186.1;Parent=gene-CCO34_RS09525;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=CCO34_RS09525;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 372283 372696 . + . ID=gene-CCO34_RS09530;Name=CCO34_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09530;old_locus_tag=CCO34_09525 NZ_NPMD01000003.1 Protein Homology CDS 372283 372696 . + 0 ID=cds-WP_000244756.1;Parent=gene-CCO34_RS09530;Dbxref=GenBank:WP_000244756.1;Name=WP_000244756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=CCO34_RS09530;product=protein YgfX;protein_id=WP_000244756.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 372749 373270 . - . ID=gene-CCO34_RS09535;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=CCO34_RS09535;old_locus_tag=CCO34_09530 NZ_NPMD01000003.1 Protein Homology CDS 372749 373270 . - 0 ID=cds-WP_001055885.1;Parent=gene-CCO34_RS09535;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=CCO34_RS09535;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 373383 374279 . + . ID=gene-CCO34_RS09540;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CCO34_RS09540;old_locus_tag=CCO34_09535 NZ_NPMD01000003.1 Protein Homology CDS 373383 374279 . + 0 ID=cds-WP_000434302.1;Parent=gene-CCO34_RS09540;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=CCO34_RS09540;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 374303 375016 . + . ID=gene-CCO34_RS09545;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=CCO34_RS09545;old_locus_tag=CCO34_09540 NZ_NPMD01000003.1 Protein Homology CDS 374303 375016 . + 0 ID=cds-WP_000745618.1;Parent=gene-CCO34_RS09545;Dbxref=GenBank:WP_000745618.1;Name=WP_000745618.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=CCO34_RS09545;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745618.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 375022 376755 . + . ID=gene-CCO34_RS09550;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CCO34_RS09550;old_locus_tag=CCO34_09545 NZ_NPMD01000003.1 Protein Homology CDS 375022 376755 . + 0 ID=cds-WP_000813385.1;Parent=gene-CCO34_RS09550;Dbxref=GenBank:WP_000813385.1;Name=WP_000813385.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=CCO34_RS09550;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813385.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 376860 377958 . + . ID=gene-CCO34_RS09555;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CCO34_RS09555;old_locus_tag=CCO34_09550 NZ_NPMD01000003.1 Protein Homology CDS 376860 376934 . + 0 ID=cds-WP_010989230.1;Parent=gene-CCO34_RS09555;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO34_RS09555;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPMD01000003.1 Protein Homology CDS 376936 377958 . + 0 ID=cds-WP_010989230.1;Parent=gene-CCO34_RS09555;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO34_RS09555;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 377968 379485 . + . ID=gene-CCO34_RS09560;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CCO34_RS09560;old_locus_tag=CCO34_09555 NZ_NPMD01000003.1 Protein Homology CDS 377968 379485 . + 0 ID=cds-WP_000003339.1;Parent=gene-CCO34_RS09560;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=CCO34_RS09560;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 379561 380106 . - . ID=gene-CCO34_RS09565;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=CCO34_RS09565;old_locus_tag=CCO34_09560 NZ_NPMD01000003.1 Protein Homology CDS 379561 380106 . - 0 ID=cds-WP_000134001.1;Parent=gene-CCO34_RS09565;Dbxref=GenBank:WP_000134001.1;Name=WP_000134001.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=CCO34_RS09565;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000134001.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 380371 381129 . + . ID=gene-CCO34_RS09575;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=CCO34_RS09575;old_locus_tag=CCO34_09570 NZ_NPMD01000003.1 Protein Homology CDS 380371 381129 . + 0 ID=cds-WP_000244328.1;Parent=gene-CCO34_RS09575;Dbxref=GenBank:WP_000244328.1;Name=WP_000244328.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=CCO34_RS09575;product=amidase activator ActS;protein_id=WP_000244328.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 381209 381282 . + . ID=gene-CCO34_RS09580;Name=CCO34_RS09580;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS09580;old_locus_tag=CCO34_09575 NZ_NPMD01000003.1 tRNAscan-SE tRNA 381209 381282 . + . ID=rna-CCO34_RS09580;Parent=gene-CCO34_RS09580;anticodon=(pos:381241..381243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS09580;product=tRNA-Gly NZ_NPMD01000003.1 tRNAscan-SE exon 381209 381282 . + . ID=exon-CCO34_RS09580-1;Parent=rna-CCO34_RS09580;anticodon=(pos:381241..381243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS09580;product=tRNA-Gly NZ_NPMD01000003.1 RefSeq gene 381414 382184 . - . ID=gene-CCO34_RS09585;Name=CCO34_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09585;old_locus_tag=CCO34_09580 NZ_NPMD01000003.1 Protein Homology CDS 381414 382184 . - 0 ID=cds-WP_001272714.1;Parent=gene-CCO34_RS09585;Dbxref=GenBank:WP_001272714.1;Name=WP_001272714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441092.1;locus_tag=CCO34_RS09585;product=DUF1460 domain-containing protein;protein_id=WP_001272714.1;transl_table=11 NZ_NPMD01000003.1 RefSeq pseudogene 382411 382581 . + . ID=gene-CCO34_RS25305;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=pseudogene;locus_tag=CCO34_RS25305;partial=true;pseudo=true;start_range=.,382411 NZ_NPMD01000003.1 Protein Homology CDS 382411 382581 . + 0 ID=cds-CCO34_RS25305;Parent=gene-CCO34_RS25305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=CCO34_RS25305;partial=true;product=tRNA(fMet)-specific endonuclease VapC;pseudo=true;start_range=.,382411;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 383388 383924 . + . ID=gene-CCO34_RS09605;Name=CCO34_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09605;old_locus_tag=CCO34_09600 NZ_NPMD01000003.1 Protein Homology CDS 383388 383924 . + 0 ID=cds-WP_001038506.1;Parent=gene-CCO34_RS09605;Dbxref=GenBank:WP_001038506.1;Name=WP_001038506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=CCO34_RS09605;product=STM3031 family outer membrane protein;protein_id=WP_001038506.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 383971 384603 . + . ID=gene-CCO34_RS09610;Name=CCO34_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09610;old_locus_tag=CCO34_09605 NZ_NPMD01000003.1 Protein Homology CDS 383971 384603 . + 0 ID=cds-WP_000835265.1;Parent=gene-CCO34_RS09610;Dbxref=GenBank:WP_000835265.1;Name=WP_000835265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=CCO34_RS09610;product=YfdX family protein;protein_id=WP_000835265.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 385322 385909 . + . ID=gene-CCO34_RS09615;Name=CCO34_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09615;old_locus_tag=CCO34_09610 NZ_NPMD01000003.1 Protein Homology CDS 385322 385909 . + 0 ID=cds-WP_001244643.1;Parent=gene-CCO34_RS09615;Dbxref=GenBank:WP_001244643.1;Name=WP_001244643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244645.1;locus_tag=CCO34_RS09615;product=fimbrial protein;protein_id=WP_001244643.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 386029 388518 . + . ID=gene-CCO34_RS09620;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=CCO34_RS09620;old_locus_tag=CCO34_09615 NZ_NPMD01000003.1 Protein Homology CDS 386029 388518 . + 0 ID=cds-WP_000705488.1;Parent=gene-CCO34_RS09620;Dbxref=GenBank:WP_000705488.1;Name=WP_000705488.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=CCO34_RS09620;product=fimbrial outer membrane usher protein StdB;protein_id=WP_000705488.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 388559 389302 . + . ID=gene-CCO34_RS09625;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=CCO34_RS09625;old_locus_tag=CCO34_09620 NZ_NPMD01000003.1 Protein Homology CDS 388559 389302 . + 0 ID=cds-WP_094965418.1;Parent=gene-CCO34_RS09625;Dbxref=GenBank:WP_094965418.1;Name=WP_094965418.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=CCO34_RS09625;product=fimbrial biogenesis chaperone StdC;protein_id=WP_094965418.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 389299 390369 . + . ID=gene-CCO34_RS09630;Name=CCO34_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09630;old_locus_tag=CCO34_09625 NZ_NPMD01000003.1 Protein Homology CDS 389299 390369 . + 0 ID=cds-WP_000147756.1;Parent=gene-CCO34_RS09630;Dbxref=GenBank:WP_000147756.1;Name=WP_000147756.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465476.1;locus_tag=CCO34_RS09630;product=fimbrial protein;protein_id=WP_000147756.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 390476 390982 . + . ID=gene-CCO34_RS09635;Name=CCO34_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09635;old_locus_tag=CCO34_09630 NZ_NPMD01000003.1 Protein Homology CDS 390476 390982 . + 0 ID=cds-WP_000093330.1;Parent=gene-CCO34_RS09635;Dbxref=GenBank:WP_000093330.1;Name=WP_000093330.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=CCO34_RS09635;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000093330.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 390969 391727 . + . ID=gene-CCO34_RS09640;Name=CCO34_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09640;old_locus_tag=CCO34_09635 NZ_NPMD01000003.1 Protein Homology CDS 390969 391727 . + 0 ID=cds-WP_000134795.1;Parent=gene-CCO34_RS09640;Dbxref=GenBank:WP_000134795.1;Name=WP_000134795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=CCO34_RS09640;product=transcriptional regulator;protein_id=WP_000134795.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 391932 392756 . - . ID=gene-CCO34_RS09645;Name=CCO34_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09645;old_locus_tag=CCO34_09640 NZ_NPMD01000003.1 Protein Homology CDS 391932 392756 . - 0 ID=cds-WP_072592482.1;Parent=gene-CCO34_RS09645;Dbxref=GenBank:WP_072592482.1;Name=WP_072592482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=CCO34_RS09645;product=nickel/cobalt efflux protein RcnA;protein_id=WP_072592482.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 392878 393150 . + . ID=gene-CCO34_RS09650;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=CCO34_RS09650;old_locus_tag=CCO34_09645 NZ_NPMD01000003.1 Protein Homology CDS 392878 393150 . + 0 ID=cds-WP_000019953.1;Parent=gene-CCO34_RS09650;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=CCO34_RS09650;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 393181 394410 . - . ID=gene-CCO34_RS09655;Name=CCO34_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09655;old_locus_tag=CCO34_09650 NZ_NPMD01000003.1 Protein Homology CDS 393181 394410 . - 0 ID=cds-WP_000036829.1;Parent=gene-CCO34_RS09655;Dbxref=GenBank:WP_000036829.1;Name=WP_000036829.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=CCO34_RS09655;product=amino acid permease;protein_id=WP_000036829.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 394552 395007 . - . ID=gene-CCO34_RS09660;Name=CCO34_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09660;old_locus_tag=CCO34_09655 NZ_NPMD01000003.1 Protein Homology CDS 394552 395007 . - 0 ID=cds-WP_001519547.1;Parent=gene-CCO34_RS09660;Dbxref=GenBank:WP_001519547.1;Name=WP_001519547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=CCO34_RS09660;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001519547.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 395111 395974 . + . ID=gene-CCO34_RS09665;Name=CCO34_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09665;old_locus_tag=CCO34_09660 NZ_NPMD01000003.1 Protein Homology CDS 395111 395974 . + 0 ID=cds-WP_001270769.1;Parent=gene-CCO34_RS09665;Dbxref=GenBank:WP_001270769.1;Name=WP_001270769.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=CCO34_RS09665;product=LysR family transcriptional regulator;protein_id=WP_001270769.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 396097 397275 . + . ID=gene-CCO34_RS09670;Name=CCO34_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09670;old_locus_tag=CCO34_09665 NZ_NPMD01000003.1 Protein Homology CDS 396097 397275 . + 0 ID=cds-WP_000665980.1;Parent=gene-CCO34_RS09670;Dbxref=GenBank:WP_000665980.1;Name=WP_000665980.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=CCO34_RS09670;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665980.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 397706 398542 . + . ID=gene-CCO34_RS09685;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=CCO34_RS09685;old_locus_tag=CCO34_09680 NZ_NPMD01000003.1 Protein Homology CDS 397706 398542 . + 0 ID=cds-WP_000383274.1;Parent=gene-CCO34_RS09685;Dbxref=GenBank:WP_000383274.1;Name=WP_000383274.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=CCO34_RS09685;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383274.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 398599 399360 . + . ID=gene-CCO34_RS09690;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=CCO34_RS09690;old_locus_tag=CCO34_09685 NZ_NPMD01000003.1 Protein Homology CDS 398599 399360 . + 0 ID=cds-WP_000602490.1;Parent=gene-CCO34_RS09690;Dbxref=GenBank:WP_000602490.1;Name=WP_000602490.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=CCO34_RS09690;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602490.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 399714 401132 . + . ID=gene-CCO34_RS09695;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=CCO34_RS09695;old_locus_tag=CCO34_09690 NZ_NPMD01000003.1 Protein Homology CDS 399714 401132 . + 0 ID=cds-WP_000253650.1;Parent=gene-CCO34_RS09695;Dbxref=GenBank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=CCO34_RS09695;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 401245 401952 . + . ID=gene-CCO34_RS09700;Name=CCO34_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09700;old_locus_tag=CCO34_09695 NZ_NPMD01000003.1 Protein Homology CDS 401245 401952 . + 0 ID=cds-WP_000848633.1;Parent=gene-CCO34_RS09700;Dbxref=GenBank:WP_000848633.1;Name=WP_000848633.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=CCO34_RS09700;product=aspartate/glutamate racemase;protein_id=WP_000848633.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 401924 402859 . - . ID=gene-CCO34_RS09705;Name=CCO34_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09705;old_locus_tag=CCO34_09700 NZ_NPMD01000003.1 Protein Homology CDS 401924 402859 . - 0 ID=cds-WP_000741798.1;Parent=gene-CCO34_RS09705;Dbxref=GenBank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=CCO34_RS09705;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 402977 404239 . + . ID=gene-CCO34_RS09710;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CCO34_RS09710;old_locus_tag=CCO34_09705 NZ_NPMD01000003.1 Protein Homology CDS 402977 404239 . + 0 ID=cds-WP_000056575.1;Parent=gene-CCO34_RS09710;Dbxref=GenBank:WP_000056575.1;Name=WP_000056575.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=CCO34_RS09710;product=diaminopimelate decarboxylase;protein_id=WP_000056575.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 404249 405271 . - . ID=gene-CCO34_RS09715;Name=CCO34_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09715;old_locus_tag=CCO34_09710 NZ_NPMD01000003.1 Protein Homology CDS 404249 405271 . - 0 ID=cds-WP_000968351.1;Parent=gene-CCO34_RS09715;Dbxref=GenBank:WP_000968351.1;Name=WP_000968351.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000968342.1;locus_tag=CCO34_RS09715;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968351.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 405282 406310 . - . ID=gene-CCO34_RS09720;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=CCO34_RS09720;old_locus_tag=CCO34_09715 NZ_NPMD01000003.1 Protein Homology CDS 405282 406310 . - 0 ID=cds-WP_000201029.1;Parent=gene-CCO34_RS09720;Dbxref=GenBank:WP_000201029.1;Name=WP_000201029.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=CCO34_RS09720;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201029.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 406903 409062 . + . ID=gene-CCO34_RS09725;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=CCO34_RS09725;old_locus_tag=CCO34_09720 NZ_NPMD01000003.1 Protein Homology CDS 406903 409062 . + 0 ID=cds-WP_000896097.1;Parent=gene-CCO34_RS09725;Dbxref=GenBank:WP_000896097.1;Name=WP_000896097.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=CCO34_RS09725;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000896097.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 409055 410257 . + . ID=gene-CCO34_RS09730;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=CCO34_RS09730;old_locus_tag=CCO34_09725 NZ_NPMD01000003.1 Protein Homology CDS 409055 410257 . + 0 ID=cds-WP_000004679.1;Parent=gene-CCO34_RS09730;Dbxref=GenBank:WP_000004679.1;Name=WP_000004679.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=CCO34_RS09730;product=lysophospholipid transporter LplT;protein_id=WP_000004679.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 410344 411384 . - . ID=gene-CCO34_RS09735;Name=CCO34_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09735;old_locus_tag=CCO34_09730 NZ_NPMD01000003.1 Protein Homology CDS 410344 411384 . - 0 ID=cds-WP_000558960.1;Parent=gene-CCO34_RS09735;Dbxref=GenBank:WP_000558960.1;Name=WP_000558960.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=CCO34_RS09735;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558960.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 411575 411793 . - . ID=gene-CCO34_RS09740;Name=CCO34_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09740;old_locus_tag=CCO34_09735 NZ_NPMD01000003.1 Protein Homology CDS 411575 411793 . - 0 ID=cds-WP_000758662.1;Parent=gene-CCO34_RS09740;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=CCO34_RS09740;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 411963 412676 . - . ID=gene-CCO34_RS09745;Name=CCO34_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09745;old_locus_tag=CCO34_09740 NZ_NPMD01000003.1 Protein Homology CDS 411963 412676 . - 0 ID=cds-WP_000895635.1;Parent=gene-CCO34_RS09745;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=CCO34_RS09745;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 412858 413553 . - . ID=gene-CCO34_RS09750;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=CCO34_RS09750;old_locus_tag=CCO34_09745 NZ_NPMD01000003.1 Protein Homology CDS 412858 413553 . - 0 ID=cds-WP_001274933.1;Parent=gene-CCO34_RS09750;Dbxref=GenBank:WP_001274933.1;Name=WP_001274933.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=CCO34_RS09750;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274933.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 414236 414766 . + . ID=gene-CCO34_RS09755;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=CCO34_RS09755;old_locus_tag=CCO34_09750 NZ_NPMD01000003.1 Protein Homology CDS 414236 414766 . + 0 ID=cds-WP_000564481.1;Parent=gene-CCO34_RS09755;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=CCO34_RS09755;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 414779 417025 . + . ID=gene-CCO34_RS09760;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CCO34_RS09760;old_locus_tag=CCO34_09755 NZ_NPMD01000003.1 Protein Homology CDS 414779 417025 . + 0 ID=cds-WP_000957887.1;Parent=gene-CCO34_RS09760;Dbxref=GenBank:WP_000957887.1;Name=WP_000957887.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=CCO34_RS09760;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957887.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 417241 418116 . + . ID=gene-CCO34_RS09765;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CCO34_RS09765;old_locus_tag=CCO34_09760 NZ_NPMD01000003.1 Protein Homology CDS 417241 418116 . + 0 ID=cds-WP_000204647.1;Parent=gene-CCO34_RS09765;Dbxref=GenBank:WP_000204647.1;Name=WP_000204647.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=CCO34_RS09765;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204647.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 418123 418917 . + . ID=gene-CCO34_RS09770;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=CCO34_RS09770;old_locus_tag=CCO34_09765 NZ_NPMD01000003.1 Protein Homology CDS 418123 418917 . + 0 ID=cds-WP_000816246.1;Parent=gene-CCO34_RS09770;Dbxref=GenBank:WP_000816246.1;Name=WP_000816246.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=CCO34_RS09770;product=thymidylate synthase;protein_id=WP_000816246.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 419102 419572 . + . ID=gene-CCO34_RS09780;Name=CCO34_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09780;old_locus_tag=CCO34_09775 NZ_NPMD01000003.1 Protein Homology CDS 419102 419572 . + 0 ID=cds-WP_000744668.1;Parent=gene-CCO34_RS09780;Dbxref=GenBank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=CCO34_RS09780;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 419563 420126 . + . ID=gene-CCO34_RS09785;Name=CCO34_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09785;old_locus_tag=CCO34_09780 NZ_NPMD01000003.1 Protein Homology CDS 419563 420126 . + 0 ID=cds-WP_000029159.1;Parent=gene-CCO34_RS09785;Dbxref=GenBank:WP_000029159.1;Name=WP_000029159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=CCO34_RS09785;product=prepilin peptidase-dependent protein;protein_id=WP_000029159.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 420123 420530 . + . ID=gene-CCO34_RS09790;Name=CCO34_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09790;old_locus_tag=CCO34_09785 NZ_NPMD01000003.1 Protein Homology CDS 420123 420530 . + 0 ID=cds-WP_001078536.1;Parent=gene-CCO34_RS09790;Dbxref=GenBank:WP_001078536.1;Name=WP_001078536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=CCO34_RS09790;product=DUF2509 family protein;protein_id=WP_001078536.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 420515 420835 . + . ID=gene-CCO34_RS09795;Name=CCO34_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09795;old_locus_tag=CCO34_09790 NZ_NPMD01000003.1 Protein Homology CDS 420515 420835 . + 0 ID=cds-WP_000019288.1;Parent=gene-CCO34_RS09795;Dbxref=GenBank:WP_000019288.1;Name=WP_000019288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=CCO34_RS09795;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019288.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 420851 424222 . + . ID=gene-CCO34_RS09800;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=CCO34_RS09800;old_locus_tag=CCO34_09795 NZ_NPMD01000003.1 Protein Homology CDS 420851 424222 . + 0 ID=cds-WP_000946818.1;Parent=gene-CCO34_RS09800;Dbxref=GenBank:WP_000946818.1;Name=WP_000946818.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=CCO34_RS09800;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946818.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 424401 427289 . + . ID=gene-CCO34_RS09805;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=CCO34_RS09805;old_locus_tag=CCO34_09800 NZ_NPMD01000003.1 Protein Homology CDS 424401 427289 . + 0 ID=cds-WP_001138253.1;Parent=gene-CCO34_RS09805;Dbxref=GenBank:WP_001138253.1;Name=WP_001138253.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=CCO34_RS09805;product=pitrilysin;protein_id=WP_001138253.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 427282 430827 . + . ID=gene-CCO34_RS09810;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=CCO34_RS09810;old_locus_tag=CCO34_09805 NZ_NPMD01000003.1 Protein Homology CDS 427282 430827 . + 0 ID=cds-WP_001000533.1;Parent=gene-CCO34_RS09810;Dbxref=GenBank:WP_001000533.1;Name=WP_001000533.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=CCO34_RS09810;product=exodeoxyribonuclease V subunit beta;protein_id=WP_001000533.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 430824 432659 . + . ID=gene-CCO34_RS09815;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=CCO34_RS09815;old_locus_tag=CCO34_09810 NZ_NPMD01000003.1 Protein Homology CDS 430824 432659 . + 0 ID=cds-WP_000155143.1;Parent=gene-CCO34_RS09815;Dbxref=GenBank:WP_000155143.1;Name=WP_000155143.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155145.1;locus_tag=CCO34_RS09815;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000155143.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 432761 434092 . - . ID=gene-CCO34_RS09820;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=CCO34_RS09820;old_locus_tag=CCO34_09815 NZ_NPMD01000003.1 Protein Homology CDS 432761 434092 . - 0 ID=cds-WP_000588964.1;Parent=gene-CCO34_RS09820;Dbxref=GenBank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=CCO34_RS09820;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 434325 435578 . + . ID=gene-CCO34_RS09825;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=CCO34_RS09825;old_locus_tag=CCO34_09820 NZ_NPMD01000003.1 Protein Homology CDS 434325 435578 . + 0 ID=cds-WP_000011919.1;Parent=gene-CCO34_RS09825;Dbxref=GenBank:WP_000011919.1;Name=WP_000011919.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=CCO34_RS09825;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011919.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 435688 435764 . - . ID=gene-CCO34_RS09830;Name=CCO34_RS09830;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS09830;old_locus_tag=CCO34_09825 NZ_NPMD01000003.1 tRNAscan-SE tRNA 435688 435764 . - . ID=rna-CCO34_RS09830;Parent=gene-CCO34_RS09830;anticodon=(pos:complement(435728..435730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS09830;product=tRNA-Met NZ_NPMD01000003.1 tRNAscan-SE exon 435688 435764 . - . ID=exon-CCO34_RS09830-1;Parent=rna-CCO34_RS09830;anticodon=(pos:complement(435728..435730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS09830;product=tRNA-Met NZ_NPMD01000003.1 RefSeq gene 435972 437069 . + . ID=gene-CCO34_RS09835;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=CCO34_RS09835;old_locus_tag=CCO34_09830 NZ_NPMD01000003.1 Protein Homology CDS 435972 437069 . + 0 ID=cds-WP_000678626.1;Parent=gene-CCO34_RS09835;Dbxref=GenBank:WP_000678626.1;Name=WP_000678626.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=CCO34_RS09835;product=murein transglycosylase A;protein_id=WP_000678626.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 437179 437985 . + . ID=gene-CCO34_RS09840;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=CCO34_RS09840;old_locus_tag=CCO34_09835 NZ_NPMD01000003.1 Protein Homology CDS 437179 437985 . + 0 ID=cds-WP_000117752.1;Parent=gene-CCO34_RS09840;Dbxref=GenBank:WP_000117752.1;Name=WP_000117752.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=CCO34_RS09840;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117752.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 438037 438924 . - . ID=gene-CCO34_RS09845;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO34_RS09845;old_locus_tag=CCO34_09840 NZ_NPMD01000003.1 Protein Homology CDS 438037 438924 . - 0 ID=cds-WP_021000733.1;Parent=gene-CCO34_RS09845;Dbxref=GenBank:WP_021000733.1;Name=WP_021000733.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=CCO34_RS09845;product=EamA family transporter RarD;protein_id=WP_021000733.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 439224 439667 . - . ID=gene-CCO34_RS09850;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=CCO34_RS09850;old_locus_tag=CCO34_09845 NZ_NPMD01000003.1 Protein Homology CDS 439224 439667 . - 0 ID=cds-WP_000184198.1;Parent=gene-CCO34_RS09850;Dbxref=GenBank:WP_000184198.1;Name=WP_000184198.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=CCO34_RS09850;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184198.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 439667 440872 . - . ID=gene-CCO34_RS09855;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=CCO34_RS09855;old_locus_tag=CCO34_09850 NZ_NPMD01000003.1 Protein Homology CDS 439667 440872 . - 0 ID=cds-WP_000991053.1;Parent=gene-CCO34_RS09855;Dbxref=GenBank:WP_000991053.1;Name=WP_000991053.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=CCO34_RS09855;product=cysteine desulfurase CsdA;protein_id=WP_000991053.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 441065 441292 . + . ID=gene-CCO34_RS09860;Name=CCO34_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09860;old_locus_tag=CCO34_09855 NZ_NPMD01000003.1 Protein Homology CDS 441065 441292 . + 0 ID=cds-WP_000750393.1;Parent=gene-CCO34_RS09860;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=CCO34_RS09860;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 441639 442556 . + . ID=gene-CCO34_RS09865;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=CCO34_RS09865;old_locus_tag=CCO34_09860 NZ_NPMD01000003.1 Protein Homology CDS 441639 442556 . + 0 ID=cds-WP_000044409.1;Parent=gene-CCO34_RS09865;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=CCO34_RS09865;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 442575 442970 . + . ID=gene-CCO34_RS09870;Name=CCO34_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09870;old_locus_tag=CCO34_09865 NZ_NPMD01000003.1 Protein Homology CDS 442575 442970 . + 0 ID=cds-WP_000203913.1;Parent=gene-CCO34_RS09870;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=CCO34_RS09870;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 442963 444063 . + . ID=gene-CCO34_RS09875;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=CCO34_RS09875;old_locus_tag=CCO34_09870 NZ_NPMD01000003.1 Protein Homology CDS 442963 444063 . + 0 ID=cds-WP_001045497.1;Parent=gene-CCO34_RS09875;Dbxref=GenBank:WP_001045497.1;Name=WP_001045497.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=CCO34_RS09875;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045497.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 444122 444832 . - . ID=gene-CCO34_RS09880;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=CCO34_RS09880;old_locus_tag=CCO34_09875 NZ_NPMD01000003.1 Protein Homology CDS 444122 444832 . - 0 ID=cds-WP_000642330.1;Parent=gene-CCO34_RS09880;Dbxref=GenBank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=CCO34_RS09880;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 444890 445312 . - . ID=gene-CCO34_RS09885;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=CCO34_RS09885;old_locus_tag=CCO34_09880 NZ_NPMD01000003.1 Protein Homology CDS 444890 445312 . - 0 ID=cds-WP_000920848.1;Parent=gene-CCO34_RS09885;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=CCO34_RS09885;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 445314 446732 . - . ID=gene-CCO34_RS09890;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=CCO34_RS09890;old_locus_tag=CCO34_09885 NZ_NPMD01000003.1 Protein Homology CDS 445314 446732 . - 0 ID=cds-WP_080180960.1;Parent=gene-CCO34_RS09890;Dbxref=GenBank:WP_080180960.1;Name=WP_080180960.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=CCO34_RS09890;product=L-fuculokinase;protein_id=WP_080180960.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 446833 448608 . - . ID=gene-CCO34_RS09895;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=CCO34_RS09895;old_locus_tag=CCO34_09890 NZ_NPMD01000003.1 Protein Homology CDS 446833 448608 . - 0 ID=cds-WP_000724126.1;Parent=gene-CCO34_RS09895;Dbxref=GenBank:WP_000724126.1;Name=WP_000724126.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=CCO34_RS09895;product=L-fucose isomerase;protein_id=WP_000724126.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 448640 449956 . - . ID=gene-CCO34_RS09900;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO34_RS09900;old_locus_tag=CCO34_09895 NZ_NPMD01000003.1 Protein Homology CDS 448640 449956 . - 0 ID=cds-WP_000528622.1;Parent=gene-CCO34_RS09900;Dbxref=GenBank:WP_000528622.1;Name=WP_000528622.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=CCO34_RS09900;product=L-fucose:H+ symporter permease;protein_id=WP_000528622.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 450512 451159 . + . ID=gene-CCO34_RS09905;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=CCO34_RS09905;old_locus_tag=CCO34_09900 NZ_NPMD01000003.1 Protein Homology CDS 450512 451159 . + 0 ID=cds-WP_000440819.1;Parent=gene-CCO34_RS09905;Dbxref=GenBank:WP_000440819.1;Name=WP_000440819.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=CCO34_RS09905;product=L-fuculose-phosphate aldolase;protein_id=WP_000440819.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 451176 452324 . + . ID=gene-CCO34_RS09910;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO34_RS09910;old_locus_tag=CCO34_09905 NZ_NPMD01000003.1 Protein Homology CDS 451176 452324 . + 0 ID=cds-WP_080180959.1;Parent=gene-CCO34_RS09910;Dbxref=GenBank:WP_080180959.1;Name=WP_080180959.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=CCO34_RS09910;product=lactaldehyde reductase;protein_id=WP_080180959.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 452416 453171 . - . ID=gene-CCO34_RS09915;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=CCO34_RS09915;old_locus_tag=CCO34_09910 NZ_NPMD01000003.1 Protein Homology CDS 452416 453171 . - 0 ID=cds-WP_001536725.1;Parent=gene-CCO34_RS09915;Dbxref=GenBank:WP_001536725.1;Name=WP_001536725.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=CCO34_RS09915;product=flap endonuclease Xni;protein_id=WP_001536725.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 453342 454709 . - . ID=gene-CCO34_RS09925;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=CCO34_RS09925;old_locus_tag=CCO34_09920 NZ_NPMD01000003.1 Protein Homology CDS 453342 454709 . - 0 ID=cds-WP_000626384.1;Parent=gene-CCO34_RS09925;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=CCO34_RS09925;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 454768 456057 . - . ID=gene-CCO34_RS09930;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=CCO34_RS09930;old_locus_tag=CCO34_09925 NZ_NPMD01000003.1 Protein Homology CDS 454768 456057 . - 0 ID=cds-WP_000450462.1;Parent=gene-CCO34_RS09930;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=CCO34_RS09930;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 456622 457986 . - . ID=gene-CCO34_RS09935;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=CCO34_RS09935;old_locus_tag=CCO34_09930 NZ_NPMD01000003.1 Protein Homology CDS 456622 457986 . - 0 ID=cds-WP_000627973.1;Parent=gene-CCO34_RS09935;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=CCO34_RS09935;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 458099 458947 . - . ID=gene-CCO34_RS09940;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CCO34_RS09940;old_locus_tag=CCO34_09935 NZ_NPMD01000003.1 Protein Homology CDS 458099 458947 . - 0 ID=cds-WP_000100463.1;Parent=gene-CCO34_RS09940;Dbxref=GenBank:WP_000100463.1;Name=WP_000100463.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=CCO34_RS09940;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100463.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 459016 459561 . + . ID=gene-CCO34_RS09945;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=CCO34_RS09945;old_locus_tag=CCO34_09940 NZ_NPMD01000003.1 Protein Homology CDS 459016 459561 . + 0 ID=cds-WP_000343990.1;Parent=gene-CCO34_RS09945;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=CCO34_RS09945;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 460172 460501 . + . ID=gene-CCO34_RS09955;Name=CCO34_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09955;old_locus_tag=CCO34_09950 NZ_NPMD01000003.1 Protein Homology CDS 460172 460501 . + 0 ID=cds-WP_000207014.1;Parent=gene-CCO34_RS09955;Dbxref=GenBank:WP_000207014.1;Name=WP_000207014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=CCO34_RS09955;product=YqcC family protein;protein_id=WP_000207014.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 460501 461283 . + . ID=gene-CCO34_RS09960;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=CCO34_RS09960;old_locus_tag=CCO34_09955 NZ_NPMD01000003.1 Protein Homology CDS 460501 461283 . + 0 ID=cds-WP_000890030.1;Parent=gene-CCO34_RS09960;Dbxref=GenBank:WP_000890030.1;Name=WP_000890030.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=CCO34_RS09960;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890030.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 461302 461751 . + . ID=gene-CCO34_RS09965;Name=CCO34_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09965;old_locus_tag=CCO34_09960 NZ_NPMD01000003.1 Protein Homology CDS 461302 461751 . + 0 ID=cds-WP_000807731.1;Parent=gene-CCO34_RS09965;Dbxref=GenBank:WP_000807731.1;Name=WP_000807731.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=CCO34_RS09965;product=flavodoxin;protein_id=WP_000807731.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 461901 462152 . - . ID=gene-CCO34_RS09970;Name=CCO34_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09970;old_locus_tag=CCO34_09965 NZ_NPMD01000003.1 GeneMarkS-2+ CDS 461901 462152 . - 0 ID=cds-WP_001540820.1;Parent=gene-CCO34_RS09970;Dbxref=GenBank:WP_001540820.1;Name=WP_001540820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS09970;product=hypothetical protein;protein_id=WP_001540820.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 462232 463590 . + . ID=gene-CCO34_RS09975;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=CCO34_RS09975;old_locus_tag=CCO34_09970 NZ_NPMD01000003.1 Protein Homology CDS 462232 463590 . + 0 ID=cds-WP_000097015.1;Parent=gene-CCO34_RS09975;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=CCO34_RS09975;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 463587 464927 . + . ID=gene-CCO34_RS09980;Name=CCO34_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09980;old_locus_tag=CCO34_09975 NZ_NPMD01000003.1 Protein Homology CDS 463587 464927 . + 0 ID=cds-WP_000211806.1;Parent=gene-CCO34_RS09980;Dbxref=GenBank:WP_000211806.1;Name=WP_000211806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=CCO34_RS09980;product=enolase C-terminal domain-like protein;protein_id=WP_000211806.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 464948 466288 . + . ID=gene-CCO34_RS09985;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=CCO34_RS09985;old_locus_tag=CCO34_09980 NZ_NPMD01000003.1 Protein Homology CDS 464948 466288 . + 0 ID=cds-WP_000107113.1;Parent=gene-CCO34_RS09985;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=CCO34_RS09985;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 466366 467508 . + . ID=gene-CCO34_RS09990;Name=CCO34_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS09990;old_locus_tag=CCO34_09985 NZ_NPMD01000003.1 Protein Homology CDS 466366 467508 . + 0 ID=cds-WP_000706477.1;Parent=gene-CCO34_RS09990;Dbxref=GenBank:WP_000706477.1;Name=WP_000706477.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=CCO34_RS09990;product=glycerate kinase;protein_id=WP_000706477.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 467552 470308 . - . ID=gene-CCO34_RS09995;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=CCO34_RS09995;old_locus_tag=CCO34_09990 NZ_NPMD01000003.1 Protein Homology CDS 467552 470308 . - 0 ID=cds-WP_000186400.1;Parent=gene-CCO34_RS09995;Dbxref=GenBank:WP_000186400.1;Name=WP_000186400.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=CCO34_RS09995;product=two-component sensor histidine kinase BarA;protein_id=WP_000186400.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 470366 471661 . + . ID=gene-CCO34_RS10000;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CCO34_RS10000;old_locus_tag=CCO34_09995 NZ_NPMD01000003.1 Protein Homology CDS 470366 471661 . + 0 ID=cds-WP_000046842.1;Parent=gene-CCO34_RS10000;Dbxref=GenBank:WP_000046842.1;Name=WP_000046842.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=CCO34_RS10000;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046842.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 471713 473947 . + . ID=gene-CCO34_RS10005;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=CCO34_RS10005;old_locus_tag=CCO34_10000 NZ_NPMD01000003.1 Protein Homology CDS 471713 473947 . + 0 ID=cds-WP_000226838.1;Parent=gene-CCO34_RS10005;Dbxref=GenBank:WP_000226838.1;Name=WP_000226838.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=CCO34_RS10005;product=GTP diphosphokinase;protein_id=WP_000226838.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 474297 475328 . - . ID=gene-CCO34_RS10010;Name=CCO34_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10010;old_locus_tag=CCO34_10005 NZ_NPMD01000003.1 Protein Homology CDS 474297 475328 . - 0 ID=cds-WP_001072353.1;Parent=gene-CCO34_RS10010;Dbxref=GenBank:WP_001072353.1;Name=WP_001072353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750138.1;locus_tag=CCO34_RS10010;product=hypothetical protein;protein_id=WP_001072353.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 475383 475919 . - . ID=gene-CCO34_RS10015;Name=CCO34_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10015;old_locus_tag=CCO34_10010 NZ_NPMD01000003.1 Protein Homology CDS 475383 475919 . - 0 ID=cds-WP_001079646.1;Parent=gene-CCO34_RS10015;Dbxref=GenBank:WP_001079646.1;Name=WP_001079646.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=CCO34_RS10015;product=fimbrial protein;protein_id=WP_001079646.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 475916 476386 . - . ID=gene-CCO34_RS10020;Name=CCO34_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10020;old_locus_tag=CCO34_10015 NZ_NPMD01000003.1 Protein Homology CDS 475916 476386 . - 0 ID=cds-WP_000832396.1;Parent=gene-CCO34_RS10020;Dbxref=GenBank:WP_000832396.1;Name=WP_000832396.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=CCO34_RS10020;product=fimbrial protein;protein_id=WP_000832396.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 476401 476907 . - . ID=gene-CCO34_RS10025;Name=CCO34_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10025;old_locus_tag=CCO34_10020 NZ_NPMD01000003.1 Protein Homology CDS 476401 476907 . - 0 ID=cds-WP_000178264.1;Parent=gene-CCO34_RS10025;Dbxref=GenBank:WP_000178264.1;Name=WP_000178264.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=CCO34_RS10025;product=fimbrial protein;protein_id=WP_000178264.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 476927 477700 . - . ID=gene-CCO34_RS10030;Name=CCO34_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10030;old_locus_tag=CCO34_10025 NZ_NPMD01000003.1 Protein Homology CDS 476927 477700 . - 0 ID=cds-WP_001044455.1;Parent=gene-CCO34_RS10030;Dbxref=GenBank:WP_001044455.1;Name=WP_001044455.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=CCO34_RS10030;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001044455.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 477713 480409 . - . ID=gene-CCO34_RS10035;Name=CCO34_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10035;old_locus_tag=CCO34_10030 NZ_NPMD01000003.1 Protein Homology CDS 477713 480409 . - 0 ID=cds-WP_071602143.1;Parent=gene-CCO34_RS10035;Dbxref=GenBank:WP_071602143.1;Name=WP_071602143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=CCO34_RS10035;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_071602143.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 480492 481079 . - . ID=gene-CCO34_RS10040;Name=CCO34_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10040;old_locus_tag=CCO34_10035 NZ_NPMD01000003.1 Protein Homology CDS 480492 481079 . - 0 ID=cds-WP_000842512.1;Parent=gene-CCO34_RS10040;Dbxref=GenBank:WP_000842512.1;Name=WP_000842512.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=CCO34_RS10040;product=fimbrial protein;protein_id=WP_000842512.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 481687 482487 . + . ID=gene-CCO34_RS10045;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=CCO34_RS10045;old_locus_tag=CCO34_10040 NZ_NPMD01000003.1 Protein Homology CDS 481687 482487 . + 0 ID=cds-WP_000210451.1;Parent=gene-CCO34_RS10045;Dbxref=GenBank:WP_000210451.1;Name=WP_000210451.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=CCO34_RS10045;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210451.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 482715 484352 . + . ID=gene-CCO34_RS10050;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CCO34_RS10050;old_locus_tag=CCO34_10045 NZ_NPMD01000003.1 Protein Homology CDS 482715 484352 . + 0 ID=cds-WP_000210863.1;Parent=gene-CCO34_RS10050;Dbxref=GenBank:WP_000210863.1;Name=WP_000210863.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=CCO34_RS10050;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210863.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 484435 485733 . + . ID=gene-CCO34_RS10055;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CCO34_RS10055;old_locus_tag=CCO34_10050 NZ_NPMD01000003.1 Protein Homology CDS 484435 485733 . + 0 ID=cds-WP_000036734.1;Parent=gene-CCO34_RS10055;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=CCO34_RS10055;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 485869 486540 . + . ID=gene-CCO34_RS10060;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CCO34_RS10060;old_locus_tag=CCO34_10055 NZ_NPMD01000003.1 Protein Homology CDS 485869 486540 . + 0 ID=cds-WP_001199961.1;Parent=gene-CCO34_RS10060;Dbxref=GenBank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=CCO34_RS10060;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11 NZ_NPMD01000003.1 RefSeq direct_repeat 486837 488451 . + . ID=id-NZ_NPMD01000003.1:486837..488451;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=486837..486865;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_NPMD01000003.1 RefSeq gene 488610 489407 . + . ID=gene-CCO34_RS10065;Name=CCO34_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10065;old_locus_tag=CCO34_10060 NZ_NPMD01000003.1 Protein Homology CDS 488610 489407 . + 0 ID=cds-WP_001208005.1;Parent=gene-CCO34_RS10065;Dbxref=GenBank:WP_001208005.1;Name=WP_001208005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=CCO34_RS10065;product=MBL fold metallo-hydrolase;protein_id=WP_001208005.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 489495 489857 . - . ID=gene-CCO34_RS10070;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CCO34_RS10070;old_locus_tag=CCO34_10065 NZ_NPMD01000003.1 Protein Homology CDS 489495 489857 . - 0 ID=cds-WP_000108313.1;Parent=gene-CCO34_RS10070;Dbxref=GenBank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=CCO34_RS10070;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 490293 492092 . + . ID=gene-CCO34_RS10080;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=CCO34_RS10080;old_locus_tag=CCO34_10075 NZ_NPMD01000003.1 Protein Homology CDS 490293 492092 . + 0 ID=cds-WP_080180958.1;Parent=gene-CCO34_RS10080;Dbxref=GenBank:WP_080180958.1;Name=WP_080180958.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=CCO34_RS10080;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_080180958.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 492092 493804 . + . ID=gene-CCO34_RS10085;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=CCO34_RS10085;old_locus_tag=CCO34_10080 NZ_NPMD01000003.1 Protein Homology CDS 492092 493804 . + 0 ID=cds-WP_080180957.1;Parent=gene-CCO34_RS10085;Dbxref=GenBank:WP_080180957.1;Name=WP_080180957.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=CCO34_RS10085;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_080180957.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 493880 494614 . + . ID=gene-CCO34_RS10090;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=CCO34_RS10090;old_locus_tag=CCO34_10085 NZ_NPMD01000003.1 Protein Homology CDS 493880 494614 . + 0 ID=cds-WP_000080404.1;Parent=gene-CCO34_RS10090;Dbxref=GenBank:WP_000080404.1;Name=WP_000080404.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=CCO34_RS10090;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000080404.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 494827 495780 . - . ID=gene-CCO34_RS10100;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=CCO34_RS10100;old_locus_tag=CCO34_10095 NZ_NPMD01000003.1 Protein Homology CDS 494827 495780 . - 0 ID=cds-WP_001145543.1;Parent=gene-CCO34_RS10100;Dbxref=GenBank:WP_001145543.1;Name=WP_001145543.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=CCO34_RS10100;product=SPI-1 type III secretion system effector SopD;protein_id=WP_001145543.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 496164 498863 . - . ID=gene-CCO34_RS10105;Name=CCO34_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10105;old_locus_tag=CCO34_10100 NZ_NPMD01000003.1 Protein Homology CDS 496164 498863 . - 0 ID=cds-WP_000192067.1;Parent=gene-CCO34_RS10105;Dbxref=GenBank:WP_000192067.1;Name=WP_000192067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192071.1;locus_tag=CCO34_RS10105;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_000192067.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 499221 500756 . + . ID=gene-CCO34_RS10110;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=CCO34_RS10110;old_locus_tag=CCO34_10105 NZ_NPMD01000003.1 Protein Homology CDS 499221 500756 . + 0 ID=cds-WP_000366317.1;Parent=gene-CCO34_RS10110;Dbxref=GenBank:WP_000366317.1;Name=WP_000366317.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000366313.1;locus_tag=CCO34_RS10110;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_000366317.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 500773 501375 . + . ID=gene-CCO34_RS10115;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=CCO34_RS10115;old_locus_tag=CCO34_10110 NZ_NPMD01000003.1 Protein Homology CDS 500773 501375 . + 0 ID=cds-WP_000935106.1;Parent=gene-CCO34_RS10115;Dbxref=GenBank:WP_000935106.1;Name=WP_000935106.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935106.1;locus_tag=CCO34_RS10115;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_000935106.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 501398 502456 . + . ID=gene-CCO34_RS10120;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=CCO34_RS10120;old_locus_tag=CCO34_10115 NZ_NPMD01000003.1 Protein Homology CDS 501398 502456 . + 0 ID=cds-WP_001535605.1;Parent=gene-CCO34_RS10120;Dbxref=GenBank:WP_001535605.1;Name=WP_001535605.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001804435.1;locus_tag=CCO34_RS10120;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_001535605.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 502466 503191 . + . ID=gene-CCO34_RS10125;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=CCO34_RS10125;old_locus_tag=CCO34_10120 NZ_NPMD01000003.1 Protein Homology CDS 502466 503191 . + 0 ID=cds-WP_000666422.1;Parent=gene-CCO34_RS10125;Dbxref=GenBank:WP_000666422.1;Name=WP_000666422.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666428.1;locus_tag=CCO34_RS10125;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_000666422.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 503191 503895 . + . ID=gene-CCO34_RS10130;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=CCO34_RS10130;old_locus_tag=CCO34_10125 NZ_NPMD01000003.1 Protein Homology CDS 503191 503895 . + 0 ID=cds-WP_000281414.1;Parent=gene-CCO34_RS10130;Dbxref=GenBank:WP_000281414.1;Name=WP_000281414.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748704.1;locus_tag=CCO34_RS10130;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_000281414.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 503895 504812 . + . ID=gene-CCO34_RS10135;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=CCO34_RS10135;old_locus_tag=CCO34_10130 NZ_NPMD01000003.1 Protein Homology CDS 503895 504812 . + 0 ID=cds-WP_000118674.1;Parent=gene-CCO34_RS10135;Dbxref=GenBank:WP_000118674.1;Name=WP_000118674.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417235.1;locus_tag=CCO34_RS10135;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000118674.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 504815 505108 . + . ID=gene-CCO34_RS10140;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=CCO34_RS10140;old_locus_tag=CCO34_10135 NZ_NPMD01000003.1 Protein Homology CDS 504815 505108 . + 0 ID=cds-WP_000062284.1;Parent=gene-CCO34_RS10140;Dbxref=GenBank:WP_000062284.1;Name=WP_000062284.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062285.1;locus_tag=CCO34_RS10140;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_000062284.1;transl_table=11 NZ_NPMD01000003.1 RefSeq direct_repeat 505193 506931 . + . ID=id-NZ_NPMD01000003.1:505193..506931;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=505193..505221;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_NPMD01000003.1 RefSeq gene 506946 507992 . - . ID=gene-CCO34_RS10145;Name=CCO34_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10145;old_locus_tag=CCO34_10140 NZ_NPMD01000003.1 Protein Homology CDS 506946 507992 . - 0 ID=cds-WP_000490481.1;Parent=gene-CCO34_RS10145;Dbxref=GenBank:WP_000490481.1;Name=WP_000490481.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=CCO34_RS10145;product=aminopeptidase;protein_id=WP_000490481.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 508243 509151 . + . ID=gene-CCO34_RS10150;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=CCO34_RS10150;old_locus_tag=CCO34_10145 NZ_NPMD01000003.1 Protein Homology CDS 508243 509151 . + 0 ID=cds-WP_000372384.1;Parent=gene-CCO34_RS10150;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=CCO34_RS10150;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 509161 510600 . + . ID=gene-CCO34_RS10155;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=CCO34_RS10155;old_locus_tag=CCO34_10150 NZ_NPMD01000003.1 Protein Homology CDS 509161 510600 . + 0 ID=cds-WP_001092263.1;Parent=gene-CCO34_RS10155;Dbxref=GenBank:WP_001092263.1;Name=WP_001092263.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=CCO34_RS10155;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001092263.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 510587 511192 . + . ID=gene-CCO34_RS10160;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=CCO34_RS10160;old_locus_tag=CCO34_10155 NZ_NPMD01000003.1 Protein Homology CDS 510587 511192 . + 0 ID=cds-WP_001173663.1;Parent=gene-CCO34_RS10160;Dbxref=GenBank:WP_001173663.1;Name=WP_001173663.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=CCO34_RS10160;product=adenylyl-sulfate kinase;protein_id=WP_001173663.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 511243 511566 . + . ID=gene-CCO34_RS10165;Name=CCO34_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10165;old_locus_tag=CCO34_10160 NZ_NPMD01000003.1 Protein Homology CDS 511243 511566 . + 0 ID=cds-WP_001537530.1;Parent=gene-CCO34_RS10165;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=CCO34_RS10165;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 511757 512068 . + . ID=gene-CCO34_RS10170;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=CCO34_RS10170;old_locus_tag=CCO34_10165 NZ_NPMD01000003.1 Protein Homology CDS 511757 512068 . + 0 ID=cds-WP_000517480.1;Parent=gene-CCO34_RS10170;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=CCO34_RS10170;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 512087 512797 . + . ID=gene-CCO34_RS10175;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CCO34_RS10175;old_locus_tag=CCO34_10170 NZ_NPMD01000003.1 Protein Homology CDS 512087 512797 . + 0 ID=cds-WP_000741649.1;Parent=gene-CCO34_RS10175;Dbxref=GenBank:WP_000741649.1;Name=WP_000741649.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=CCO34_RS10175;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741649.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 512797 513276 . + . ID=gene-CCO34_RS10180;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CCO34_RS10180;old_locus_tag=CCO34_10175 NZ_NPMD01000003.1 Protein Homology CDS 512797 513276 . + 0 ID=cds-WP_001219244.1;Parent=gene-CCO34_RS10180;Dbxref=GenBank:WP_001219244.1;Name=WP_001219244.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=CCO34_RS10180;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219244.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 513273 514322 . + . ID=gene-CCO34_RS10185;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=CCO34_RS10185;old_locus_tag=CCO34_10180 NZ_NPMD01000003.1 Protein Homology CDS 513273 514322 . + 0 ID=cds-WP_080180955.1;Parent=gene-CCO34_RS10185;Dbxref=GenBank:WP_080180955.1;Name=WP_080180955.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=CCO34_RS10185;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_080180955.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 514303 515064 . + . ID=gene-CCO34_RS10190;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=CCO34_RS10190;old_locus_tag=CCO34_10185 NZ_NPMD01000003.1 Protein Homology CDS 514303 515064 . + 0 ID=cds-WP_001221537.1;Parent=gene-CCO34_RS10190;Dbxref=GenBank:WP_001221537.1;Name=WP_001221537.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=CCO34_RS10190;product=5'/3'-nucleotidase SurE;protein_id=WP_001221537.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 515058 515684 . + . ID=gene-CCO34_RS10195;Name=CCO34_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10195;old_locus_tag=CCO34_10190 NZ_NPMD01000003.1 Protein Homology CDS 515058 515684 . + 0 ID=cds-WP_000253545.1;Parent=gene-CCO34_RS10195;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=CCO34_RS10195;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 515823 515981 . - . ID=gene-CCO34_RS25780;Name=CCO34_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25780 NZ_NPMD01000003.1 Protein Homology CDS 515823 515981 . - 0 ID=cds-WP_223148970.1;Parent=gene-CCO34_RS25780;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=CCO34_RS25780;product=peptidase;protein_id=WP_223148970.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 515911 516993 . + . ID=gene-CCO34_RS10200;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=CCO34_RS10200;old_locus_tag=CCO34_10195 NZ_NPMD01000003.1 Protein Homology CDS 515911 516993 . + 0 ID=cds-WP_223149274.1;Parent=gene-CCO34_RS10200;Dbxref=GenBank:WP_223149274.1;Name=WP_223149274.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=CCO34_RS10200;product=murein hydrolase activator NlpD;protein_id=WP_223149274.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 517056 518048 . + . ID=gene-CCO34_RS10205;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=CCO34_RS10205;old_locus_tag=CCO34_10200 NZ_NPMD01000003.1 Protein Homology CDS 517056 518048 . + 0 ID=cds-WP_050195828.1;Parent=gene-CCO34_RS10205;Dbxref=GenBank:WP_050195828.1;Name=WP_050195828.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=CCO34_RS10205;product=RNA polymerase sigma factor RpoS;protein_id=WP_050195828.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 518093 518329 . - . ID=gene-CCO34_RS10210;Name=CCO34_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10210;old_locus_tag=CCO34_10205 NZ_NPMD01000003.1 Protein Homology CDS 518093 518329 . - 0 ID=cds-WP_000562993.1;Parent=gene-CCO34_RS10210;Dbxref=GenBank:WP_000562993.1;Name=WP_000562993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=CCO34_RS10210;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562993.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 518340 519767 . - . ID=gene-CCO34_RS10215;Name=CCO34_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10215;old_locus_tag=CCO34_10210 NZ_NPMD01000003.1 Protein Homology CDS 518340 519767 . - 0 ID=cds-WP_000863168.1;Parent=gene-CCO34_RS10215;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=CCO34_RS10215;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 519767 520360 . - . ID=gene-CCO34_RS10220;Name=CCO34_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10220;old_locus_tag=CCO34_10215 NZ_NPMD01000003.1 Protein Homology CDS 519767 520360 . - 0 ID=cds-WP_001237182.1;Parent=gene-CCO34_RS10220;Dbxref=GenBank:WP_001237182.1;Name=WP_001237182.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=CCO34_RS10220;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001237182.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 520531 520935 . + . ID=gene-CCO34_RS10225;Name=CCO34_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10225;old_locus_tag=CCO34_10220 NZ_NPMD01000003.1 Protein Homology CDS 520531 520935 . + 0 ID=cds-WP_000423338.1;Parent=gene-CCO34_RS10225;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=CCO34_RS10225;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 520954 521718 . - . ID=gene-CCO34_RS10230;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=CCO34_RS10230;old_locus_tag=CCO34_10225 NZ_NPMD01000003.1 Protein Homology CDS 520954 521718 . - 0 ID=cds-WP_000613178.1;Parent=gene-CCO34_RS10230;Dbxref=GenBank:WP_000613178.1;Name=WP_000613178.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=CCO34_RS10230;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613178.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 521915 522838 . + . ID=gene-CCO34_RS10235;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=CCO34_RS10235;old_locus_tag=CCO34_10230 NZ_NPMD01000003.1 Protein Homology CDS 521915 522838 . + 0 ID=cds-WP_000206958.1;Parent=gene-CCO34_RS10235;Dbxref=GenBank:WP_000206958.1;Name=WP_000206958.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=CCO34_RS10235;product=L-threonate dehydrogenase;protein_id=WP_000206958.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 522832 524094 . + . ID=gene-CCO34_RS10240;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=CCO34_RS10240;old_locus_tag=CCO34_10235 NZ_NPMD01000003.1 Protein Homology CDS 522832 524094 . + 0 ID=cds-WP_000912484.1;Parent=gene-CCO34_RS10240;Dbxref=GenBank:WP_000912484.1;Name=WP_000912484.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=CCO34_RS10240;product=3-oxo-tetronate kinase;protein_id=WP_000912484.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 524091 524729 . + . ID=gene-CCO34_RS10245;Name=CCO34_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10245;old_locus_tag=CCO34_10240 NZ_NPMD01000003.1 Protein Homology CDS 524091 524729 . + 0 ID=cds-WP_000209068.1;Parent=gene-CCO34_RS10245;Dbxref=GenBank:WP_000209068.1;Name=WP_000209068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=CCO34_RS10245;product=aldolase;protein_id=WP_000209068.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 524734 525510 . + . ID=gene-CCO34_RS10250;Name=CCO34_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10250;old_locus_tag=CCO34_10245 NZ_NPMD01000003.1 Protein Homology CDS 524734 525510 . + 0 ID=cds-WP_001136891.1;Parent=gene-CCO34_RS10250;Dbxref=GenBank:WP_001136891.1;Name=WP_001136891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=CCO34_RS10250;product=HPr family phosphocarrier protein;protein_id=WP_001136891.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 525550 526500 . + . ID=gene-CCO34_RS10255;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=CCO34_RS10255;old_locus_tag=CCO34_10250 NZ_NPMD01000003.1 Protein Homology CDS 525550 526500 . + 0 ID=cds-WP_001165730.1;Parent=gene-CCO34_RS10255;Dbxref=GenBank:WP_001165730.1;Name=WP_001165730.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=CCO34_RS10255;product=D-erythronate dehydrogenase;protein_id=WP_001165730.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 526497 527993 . + . ID=gene-CCO34_RS10260;Name=CCO34_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10260;old_locus_tag=CCO34_10255 NZ_NPMD01000003.1 Protein Homology CDS 526497 527993 . + 0 ID=cds-WP_000202725.1;Parent=gene-CCO34_RS10260;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=CCO34_RS10260;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 528035 528967 . - . ID=gene-CCO34_RS10265;Name=CCO34_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10265;old_locus_tag=CCO34_10260 NZ_NPMD01000003.1 Protein Homology CDS 528035 528967 . - 0 ID=cds-WP_000216307.1;Parent=gene-CCO34_RS10265;Dbxref=GenBank:WP_000216307.1;Name=WP_000216307.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=CCO34_RS10265;product=LysR family transcriptional regulator;protein_id=WP_000216307.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 529055 530263 . + . ID=gene-CCO34_RS10270;Name=CCO34_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10270;old_locus_tag=CCO34_10265 NZ_NPMD01000003.1 Protein Homology CDS 529055 530263 . + 0 ID=cds-WP_094965419.1;Parent=gene-CCO34_RS10270;Dbxref=GenBank:WP_094965419.1;Name=WP_094965419.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=CCO34_RS10270;product=MFS transporter;protein_id=WP_094965419.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 530260 530640 . + . ID=gene-CCO34_RS10275;Name=CCO34_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10275;old_locus_tag=CCO34_10270 NZ_NPMD01000003.1 Protein Homology CDS 530260 530640 . + 0 ID=cds-WP_001070474.1;Parent=gene-CCO34_RS10275;Dbxref=GenBank:WP_001070474.1;Name=WP_001070474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=CCO34_RS10275;product=DUF4440 domain-containing protein;protein_id=WP_001070474.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 530696 533263 . - . ID=gene-CCO34_RS10280;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CCO34_RS10280;old_locus_tag=CCO34_10275 NZ_NPMD01000003.1 Protein Homology CDS 530696 533263 . - 0 ID=cds-WP_001005806.1;Parent=gene-CCO34_RS10280;Dbxref=GenBank:WP_001005806.1;Name=WP_001005806.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=CCO34_RS10280;product=DNA mismatch repair protein MutS;protein_id=WP_001005806.1;transl_table=11 NZ_NPMD01000003.1 RefSeq pseudogene 533422 533820 . + . ID=gene-CCO34_RS10285;Name=CCO34_RS10285;end_range=533820,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS10285;old_locus_tag=CCO34_10280;partial=true;pseudo=true NZ_NPMD01000003.1 Protein Homology CDS 533422 533820 . + 0 ID=cds-CCO34_RS10285;Parent=gene-CCO34_RS10285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=533820,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=CCO34_RS10285;partial=true;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_NPMD01000003.1 RefSeq pseudogene 534020 534250 . + . ID=gene-CCO34_RS10290;Name=CCO34_RS10290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS10290;old_locus_tag=CCO34_10285;partial=true;pseudo=true;start_range=.,534020 NZ_NPMD01000003.1 Protein Homology CDS 534020 534250 . + 0 ID=cds-CCO34_RS10290;Parent=gene-CCO34_RS10290;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=CCO34_RS10290;partial=true;product=hypothetical protein;pseudo=true;start_range=.,534020;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 534407 535075 . + . ID=gene-CCO34_RS10295;Name=CCO34_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10295;old_locus_tag=CCO34_10290 NZ_NPMD01000003.1 Protein Homology CDS 534407 535075 . + 0 ID=cds-WP_000445914.1;Parent=gene-CCO34_RS10295;Dbxref=GenBank:WP_000445914.1;Name=WP_000445914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445913.1;locus_tag=CCO34_RS10295;product=hypothetical protein;protein_id=WP_000445914.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 535102 535596 . + . ID=gene-CCO34_RS10300;Name=CCO34_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10300;old_locus_tag=CCO34_10295 NZ_NPMD01000003.1 Protein Homology CDS 535102 535596 . + 0 ID=cds-WP_000424947.1;Parent=gene-CCO34_RS10300;Dbxref=GenBank:WP_000424947.1;Name=WP_000424947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424949.1;locus_tag=CCO34_RS10300;product=hypothetical protein;protein_id=WP_000424947.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 535841 536497 . - . ID=gene-CCO34_RS10305;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=CCO34_RS10305;old_locus_tag=CCO34_10300 NZ_NPMD01000003.1 Protein Homology CDS 535841 536497 . - 0 ID=cds-WP_000420452.1;Parent=gene-CCO34_RS10305;Dbxref=GenBank:WP_000420452.1;Name=WP_000420452.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=CCO34_RS10305;product=protein-serine/threonine phosphatase;protein_id=WP_000420452.1;transl_table=11 NZ_NPMD01000003.1 RefSeq pseudogene 536724 537139 . + . ID=gene-CCO34_RS10310;Name=CCO34_RS10310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS10310;old_locus_tag=CCO34_10305;partial=true;pseudo=true;start_range=.,536724 NZ_NPMD01000003.1 Protein Homology CDS 536724 537139 . + 0 ID=cds-CCO34_RS10310;Parent=gene-CCO34_RS10310;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=CCO34_RS10310;partial=true;product=transposase;pseudo=true;start_range=.,536724;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 537212 537739 . - . ID=gene-CCO34_RS10315;Name=CCO34_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10315;old_locus_tag=CCO34_10310 NZ_NPMD01000003.1 Protein Homology CDS 537212 537739 . - 0 ID=cds-WP_000971655.1;Parent=gene-CCO34_RS10315;Dbxref=GenBank:WP_000971655.1;Name=WP_000971655.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=CCO34_RS10315;product=GNAT family N-acetyltransferase;protein_id=WP_000971655.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 537736 538026 . - . ID=gene-CCO34_RS10320;Name=CCO34_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10320;old_locus_tag=CCO34_10315 NZ_NPMD01000003.1 Protein Homology CDS 537736 538026 . - 0 ID=cds-WP_000855694.1;Parent=gene-CCO34_RS10320;Dbxref=GenBank:WP_000855694.1;Name=WP_000855694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=CCO34_RS10320;product=DUF1778 domain-containing protein;protein_id=WP_000855694.1;transl_table=11 NZ_NPMD01000003.1 RefSeq pseudogene 538296 538474 . - . ID=gene-CCO34_RS10325;Name=CCO34_RS10325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS10325;old_locus_tag=CCO34_10320;partial=true;pseudo=true;start_range=.,538296 NZ_NPMD01000003.1 Protein Homology CDS 538296 538474 . - 0 ID=cds-CCO34_RS10325;Parent=gene-CCO34_RS10325;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=CCO34_RS10325;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,538296;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 538715 539041 . + . ID=gene-CCO34_RS10330;Name=CCO34_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10330;old_locus_tag=CCO34_10325 NZ_NPMD01000003.1 Protein Homology CDS 538715 539041 . + 0 ID=cds-WP_000393300.1;Parent=gene-CCO34_RS10330;Dbxref=GenBank:WP_000393300.1;Name=WP_000393300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=CCO34_RS10330;product=hypothetical protein;protein_id=WP_000393300.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 539314 539661 . - . ID=gene-CCO34_RS10335;Name=CCO34_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10335;old_locus_tag=CCO34_10330 NZ_NPMD01000003.1 Protein Homology CDS 539314 539661 . - 0 ID=cds-WP_001669174.1;Parent=gene-CCO34_RS10335;Dbxref=GenBank:WP_001669174.1;Name=WP_001669174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=CCO34_RS10335;product=DUF1493 family protein;protein_id=WP_001669174.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 539646 540095 . - . ID=gene-CCO34_RS10340;Name=CCO34_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10340;old_locus_tag=CCO34_10335 NZ_NPMD01000003.1 Protein Homology CDS 539646 540095 . - 0 ID=cds-WP_000381612.1;Parent=gene-CCO34_RS10340;Dbxref=GenBank:WP_000381612.1;Name=WP_000381612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=CCO34_RS10340;product=STM2901 family protein;protein_id=WP_000381612.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 540527 540970 . - . ID=gene-CCO34_RS10345;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=CCO34_RS10345;old_locus_tag=CCO34_10340 NZ_NPMD01000003.1 Protein Homology CDS 540527 540970 . - 0 ID=cds-WP_000715096.1;Parent=gene-CCO34_RS10345;Dbxref=GenBank:WP_000715096.1;Name=WP_000715096.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=CCO34_RS10345;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_000715096.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 541428 542078 . + . ID=gene-CCO34_RS10350;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=CCO34_RS10350;old_locus_tag=CCO34_10345 NZ_NPMD01000003.1 Protein Homology CDS 541428 542078 . + 0 ID=cds-WP_001674874.1;Parent=gene-CCO34_RS10350;Dbxref=GenBank:WP_001674874.1;Name=WP_001674874.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=CCO34_RS10350;product=type III secretion system transcriptional activator InvF;protein_id=WP_001674874.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 542075 543763 . + . ID=gene-CCO34_RS10355;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=CCO34_RS10355;old_locus_tag=CCO34_10350 NZ_NPMD01000003.1 Protein Homology CDS 542075 543763 . + 0 ID=cds-WP_000848114.1;Parent=gene-CCO34_RS10355;Dbxref=GenBank:WP_000848114.1;Name=WP_000848114.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=CCO34_RS10355;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848114.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 543760 544878 . + . ID=gene-CCO34_RS10360;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=CCO34_RS10360;old_locus_tag=CCO34_10355 NZ_NPMD01000003.1 Protein Homology CDS 543760 544878 . + 0 ID=cds-WP_000612171.1;Parent=gene-CCO34_RS10360;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=CCO34_RS10360;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 544903 546960 . + . ID=gene-CCO34_RS10365;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=CCO34_RS10365;old_locus_tag=CCO34_10360 NZ_NPMD01000003.1 Protein Homology CDS 544903 546960 . + 0 ID=cds-WP_000927219.1;Parent=gene-CCO34_RS10365;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=CCO34_RS10365;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 546984 547391 . + . ID=gene-CCO34_RS10370;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=CCO34_RS10370;old_locus_tag=CCO34_10365 NZ_NPMD01000003.1 Protein Homology CDS 546984 547391 . + 0 ID=cds-WP_001164066.1;Parent=gene-CCO34_RS10370;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=CCO34_RS10370;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 547388 548683 . + . ID=gene-CCO34_RS10375;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=CCO34_RS10375;old_locus_tag=CCO34_10370 NZ_NPMD01000003.1 Protein Homology CDS 547388 548683 . + 0 ID=cds-WP_000856766.1;Parent=gene-CCO34_RS10375;Dbxref=GenBank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=CCO34_RS10375;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 548661 549104 . + . ID=gene-CCO34_RS10380;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=CCO34_RS10380;old_locus_tag=CCO34_10375 NZ_NPMD01000003.1 Protein Homology CDS 548661 549104 . + 0 ID=cds-WP_000555884.1;Parent=gene-CCO34_RS10380;Dbxref=GenBank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=CCO34_RS10380;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 549104 550114 . + . ID=gene-CCO34_RS10385;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=CCO34_RS10385;old_locus_tag=CCO34_10380 NZ_NPMD01000003.1 Protein Homology CDS 549104 550114 . + 0 ID=cds-WP_000503106.1;Parent=gene-CCO34_RS10385;Dbxref=GenBank:WP_000503106.1;Name=WP_000503106.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=CCO34_RS10385;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_000503106.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 550114 551025 . + . ID=gene-CCO34_RS10390;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=CCO34_RS10390;old_locus_tag=CCO34_10385 NZ_NPMD01000003.1 Protein Homology CDS 550114 551025 . + 0 ID=cds-WP_000058741.1;Parent=gene-CCO34_RS10390;Dbxref=GenBank:WP_000058741.1;Name=WP_000058741.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=CCO34_RS10390;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058741.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 551015 551689 . + . ID=gene-CCO34_RS10395;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=CCO34_RS10395;old_locus_tag=CCO34_10390 NZ_NPMD01000003.1 Protein Homology CDS 551015 551689 . + 0 ID=cds-WP_000526016.1;Parent=gene-CCO34_RS10395;Dbxref=GenBank:WP_000526016.1;Name=WP_000526016.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=CCO34_RS10395;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526016.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 551715 551975 . + . ID=gene-CCO34_RS10400;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=CCO34_RS10400;old_locus_tag=CCO34_10395 NZ_NPMD01000003.1 Protein Homology CDS 551715 551975 . + 0 ID=cds-WP_000342503.1;Parent=gene-CCO34_RS10400;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=CCO34_RS10400;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 551979 552770 . + . ID=gene-CCO34_RS10405;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=CCO34_RS10405;old_locus_tag=CCO34_10400 NZ_NPMD01000003.1 Protein Homology CDS 551979 552770 . + 0 ID=cds-WP_000498965.1;Parent=gene-CCO34_RS10405;Dbxref=GenBank:WP_000498965.1;Name=WP_000498965.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=CCO34_RS10405;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000498965.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 552757 553827 . + . ID=gene-CCO34_RS10410;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=CCO34_RS10410;old_locus_tag=CCO34_10405 NZ_NPMD01000003.1 Protein Homology CDS 552757 553827 . + 0 ID=cds-WP_000097719.1;Parent=gene-CCO34_RS10410;Dbxref=GenBank:WP_000097719.1;Name=WP_000097719.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=CCO34_RS10410;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097719.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 553965 554462 . + . ID=gene-CCO34_RS10415;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=CCO34_RS10415;old_locus_tag=CCO34_10410 NZ_NPMD01000003.1 Protein Homology CDS 553965 554462 . + 0 ID=cds-WP_000386309.1;Parent=gene-CCO34_RS10415;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=CCO34_RS10415;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 554465 556246 . + . ID=gene-CCO34_RS10420;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=CCO34_RS10420;old_locus_tag=CCO34_10415 NZ_NPMD01000003.1 Protein Homology CDS 554465 556246 . + 0 ID=cds-WP_000245788.1;Parent=gene-CCO34_RS10420;Dbxref=GenBank:WP_000245788.1;Name=WP_000245788.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=CCO34_RS10420;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245788.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 556274 557503 . + . ID=gene-CCO34_RS10425;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=CCO34_RS10425;old_locus_tag=CCO34_10420 NZ_NPMD01000003.1 Protein Homology CDS 556274 557503 . + 0 ID=cds-WP_000909019.1;Parent=gene-CCO34_RS10425;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=CCO34_RS10425;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 557574 558605 . + . ID=gene-CCO34_RS10430;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=CCO34_RS10430;old_locus_tag=CCO34_10425 NZ_NPMD01000003.1 Protein Homology CDS 557574 558605 . + 0 ID=cds-WP_000932249.1;Parent=gene-CCO34_RS10430;Dbxref=GenBank:WP_000932249.1;Name=WP_000932249.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=CCO34_RS10430;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_000932249.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 558624 560681 . + . ID=gene-CCO34_RS10435;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=CCO34_RS10435;old_locus_tag=CCO34_10430 NZ_NPMD01000003.1 Protein Homology CDS 558624 560681 . + 0 ID=cds-WP_000258811.1;Parent=gene-CCO34_RS10435;Dbxref=GenBank:WP_000258811.1;Name=WP_000258811.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=CCO34_RS10435;product=SPI-1 type III secretion system effector SipA;protein_id=WP_000258811.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 560700 560948 . + . ID=gene-CCO34_RS10440;Name=CCO34_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10440;old_locus_tag=CCO34_10435 NZ_NPMD01000003.1 Protein Homology CDS 560700 560948 . + 0 ID=cds-WP_001055579.1;Parent=gene-CCO34_RS10440;Dbxref=GenBank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=CCO34_RS10440;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 560992 561252 . + . ID=gene-CCO34_RS10445;Name=CCO34_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10445;old_locus_tag=CCO34_10440 NZ_NPMD01000003.1 Protein Homology CDS 560992 561252 . + 0 ID=cds-WP_000692254.1;Parent=gene-CCO34_RS10445;Dbxref=GenBank:WP_000692254.1;Name=WP_000692254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=CCO34_RS10445;product=hypothetical protein;protein_id=WP_000692254.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 561279 561671 . + . ID=gene-CCO34_RS10450;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=CCO34_RS10450;old_locus_tag=CCO34_10445 NZ_NPMD01000003.1 Protein Homology CDS 561279 561671 . + 0 ID=cds-WP_001147852.1;Parent=gene-CCO34_RS10450;Dbxref=GenBank:WP_001147852.1;Name=WP_001147852.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=CCO34_RS10450;product=chaperone SicP;protein_id=WP_001147852.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 561658 563289 . + . ID=gene-CCO34_RS10455;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=CCO34_RS10455;old_locus_tag=CCO34_10450 NZ_NPMD01000003.1 Protein Homology CDS 561658 563289 . + 0 ID=cds-WP_000922296.1;Parent=gene-CCO34_RS10455;Dbxref=GenBank:WP_000922296.1;Name=WP_000922296.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540778.1;locus_tag=CCO34_RS10455;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_000922296.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 563343 563825 . - . ID=gene-CCO34_RS10460;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=CCO34_RS10460;old_locus_tag=CCO34_10455 NZ_NPMD01000003.1 Protein Homology CDS 563343 563825 . - 0 ID=cds-WP_000558929.1;Parent=gene-CCO34_RS10460;Dbxref=GenBank:WP_000558929.1;Name=WP_000558929.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=CCO34_RS10460;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558929.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 563843 565504 . - . ID=gene-CCO34_RS10465;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=CCO34_RS10465;old_locus_tag=CCO34_10460 NZ_NPMD01000003.1 Protein Homology CDS 563843 565504 . - 0 ID=cds-WP_001120085.1;Parent=gene-CCO34_RS10465;Dbxref=GenBank:WP_001120085.1;Name=WP_001120085.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=CCO34_RS10465;product=transcriptional regulator HilA;protein_id=WP_001120085.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 566595 567524 . - . ID=gene-CCO34_RS10470;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=CCO34_RS10470;old_locus_tag=CCO34_10465 NZ_NPMD01000003.1 Protein Homology CDS 566595 567524 . - 0 ID=cds-WP_000432699.1;Parent=gene-CCO34_RS10470;Dbxref=GenBank:WP_000432699.1;Name=WP_000432699.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=CCO34_RS10470;product=transcriptional regulator HilD;protein_id=WP_000432699.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 567840 569018 . + . ID=gene-CCO34_RS10475;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=CCO34_RS10475;old_locus_tag=CCO34_10470 NZ_NPMD01000003.1 Protein Homology CDS 567840 569018 . + 0 ID=cds-WP_000450199.1;Parent=gene-CCO34_RS10475;Dbxref=GenBank:WP_000450199.1;Name=WP_000450199.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=CCO34_RS10475;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_000450199.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 569043 569285 . + . ID=gene-CCO34_RS10480;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=CCO34_RS10480;old_locus_tag=CCO34_10475 NZ_NPMD01000003.1 Protein Homology CDS 569043 569285 . + 0 ID=cds-WP_000235228.1;Parent=gene-CCO34_RS10480;Dbxref=GenBank:WP_000235228.1;Name=WP_000235228.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=CCO34_RS10480;product=type III secretion system needle filament protein PrgI;protein_id=WP_000235228.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 569304 569609 . + . ID=gene-CCO34_RS10485;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=CCO34_RS10485;old_locus_tag=CCO34_10480 NZ_NPMD01000003.1 Protein Homology CDS 569304 569609 . + 0 ID=cds-WP_000020431.1;Parent=gene-CCO34_RS10485;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=CCO34_RS10485;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 569606 570364 . + . ID=gene-CCO34_RS10490;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=CCO34_RS10490;old_locus_tag=CCO34_10485 NZ_NPMD01000003.1 Protein Homology CDS 569606 570364 . + 0 ID=cds-WP_000621238.1;Parent=gene-CCO34_RS10490;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=CCO34_RS10490;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 570336 570935 . + . ID=gene-CCO34_RS10495;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=CCO34_RS10495;old_locus_tag=CCO34_10490 NZ_NPMD01000003.1 Protein Homology CDS 570336 570935 . + 0 ID=cds-WP_001574876.1;Parent=gene-CCO34_RS10495;Dbxref=GenBank:WP_001574876.1;Name=WP_001574876.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=CCO34_RS10495;product=oxygen-regulated invasion protein OrgA;protein_id=WP_001574876.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 570892 571572 . + . ID=gene-CCO34_RS10500;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=CCO34_RS10500;old_locus_tag=CCO34_10495 NZ_NPMD01000003.1 Protein Homology CDS 570892 571572 . + 0 ID=cds-WP_000916654.1;Parent=gene-CCO34_RS10500;Dbxref=GenBank:WP_000916654.1;Name=WP_000916654.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=CCO34_RS10500;product=type III secretion system linker protein OrgB;protein_id=WP_000916654.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 571569 572021 . + . ID=gene-CCO34_RS10505;Name=CCO34_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10505;old_locus_tag=CCO34_10500 NZ_NPMD01000003.1 Protein Homology CDS 571569 572021 . + 0 ID=cds-WP_000612179.1;Parent=gene-CCO34_RS10505;Dbxref=GenBank:WP_000612179.1;Name=WP_000612179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=CCO34_RS10505;product=type III secretion system effector protein OrgC;protein_id=WP_000612179.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 572366 573253 . + . ID=gene-CCO34_RS10510;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=CCO34_RS10510;old_locus_tag=CCO34_10505 NZ_NPMD01000003.1 Protein Homology CDS 572366 573253 . + 0 ID=cds-WP_000243998.1;Parent=gene-CCO34_RS10510;Dbxref=GenBank:WP_000243998.1;Name=WP_000243998.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=CCO34_RS10510;product=invasion transcriptional regulator HilC;protein_id=WP_000243998.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 573638 574393 . + . ID=gene-CCO34_RS10520;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=CCO34_RS10520;old_locus_tag=CCO34_10515 NZ_NPMD01000003.1 Protein Homology CDS 573638 574393 . + 0 ID=cds-WP_001246659.1;Parent=gene-CCO34_RS10520;Dbxref=GenBank:WP_001246659.1;Name=WP_001246659.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=CCO34_RS10520;product=transcriptional regulator SprB;protein_id=WP_001246659.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 574554 575462 . + . ID=gene-CCO34_RS10525;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=CCO34_RS10525;old_locus_tag=CCO34_10520 NZ_NPMD01000003.1 Protein Homology CDS 574554 575462 . + 0 ID=cds-WP_077905364.1;Parent=gene-CCO34_RS10525;Dbxref=GenBank:WP_077905364.1;Name=WP_077905364.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=CCO34_RS10525;product=type III secretion system YopJ family effector AvrA;protein_id=WP_077905364.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 575561 576409 . - . ID=gene-CCO34_RS10530;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=CCO34_RS10530;old_locus_tag=CCO34_10525 NZ_NPMD01000003.1 Protein Homology CDS 575561 576409 . - 0 ID=cds-WP_000480210.1;Parent=gene-CCO34_RS10530;Dbxref=GenBank:WP_000480210.1;Name=WP_000480210.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=CCO34_RS10530;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480210.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 576400 577260 . - . ID=gene-CCO34_RS10535;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=CCO34_RS10535;old_locus_tag=CCO34_10530 NZ_NPMD01000003.1 Protein Homology CDS 576400 577260 . - 0 ID=cds-WP_001104336.1;Parent=gene-CCO34_RS10535;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=CCO34_RS10535;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 577257 578078 . - . ID=gene-CCO34_RS10540;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=CCO34_RS10540;old_locus_tag=CCO34_10535 NZ_NPMD01000003.1 Protein Homology CDS 577257 578078 . - 0 ID=cds-WP_000083164.1;Parent=gene-CCO34_RS10540;Dbxref=GenBank:WP_000083164.1;Name=WP_000083164.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=CCO34_RS10540;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000083164.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 578075 578992 . - . ID=gene-CCO34_RS10545;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=CCO34_RS10545;old_locus_tag=CCO34_10540 NZ_NPMD01000003.1 Protein Homology CDS 578075 578992 . - 0 ID=cds-WP_000182930.1;Parent=gene-CCO34_RS10545;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=CCO34_RS10545;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 579174 579518 . + . ID=gene-CCO34_RS10550;Name=CCO34_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10550;old_locus_tag=CCO34_10545 NZ_NPMD01000003.1 Protein Homology CDS 579174 579518 . + 0 ID=cds-WP_001117938.1;Parent=gene-CCO34_RS10550;Dbxref=GenBank:WP_001117938.1;Name=WP_001117938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=CCO34_RS10550;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117938.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 579580 581658 . - . ID=gene-CCO34_RS10555;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO34_RS10555;old_locus_tag=CCO34_10550 NZ_NPMD01000003.1 Protein Homology CDS 579580 581658 . - 0 ID=cds-WP_000122692.1;Parent=gene-CCO34_RS10555;Dbxref=GenBank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=CCO34_RS10555;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 581877 582887 . - . ID=gene-CCO34_RS10560;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=CCO34_RS10560;old_locus_tag=CCO34_10555 NZ_NPMD01000003.1 Protein Homology CDS 581877 582887 . - 0 ID=cds-WP_001059962.1;Parent=gene-CCO34_RS10560;Dbxref=GenBank:WP_001059962.1;Name=WP_001059962.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=CCO34_RS10560;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059962.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 582884 584005 . - . ID=gene-CCO34_RS10565;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=CCO34_RS10565;old_locus_tag=CCO34_10560 NZ_NPMD01000003.1 Protein Homology CDS 582884 584005 . - 0 ID=cds-WP_001212962.1;Parent=gene-CCO34_RS10565;Dbxref=GenBank:WP_001212962.1;Name=WP_001212962.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=CCO34_RS10565;product=hydrogenase formation protein HypD;protein_id=WP_001212962.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 584005 584277 . - . ID=gene-CCO34_RS10570;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO34_RS10570;old_locus_tag=CCO34_10565 NZ_NPMD01000003.1 Protein Homology CDS 584005 584277 . - 0 ID=cds-WP_000334871.1;Parent=gene-CCO34_RS10570;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=CCO34_RS10570;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 584268 585140 . - . ID=gene-CCO34_RS10575;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=CCO34_RS10575;old_locus_tag=CCO34_10570 NZ_NPMD01000003.1 Protein Homology CDS 584268 585140 . - 0 ID=cds-WP_000337636.1;Parent=gene-CCO34_RS10575;Dbxref=GenBank:WP_000337636.1;Name=WP_000337636.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=CCO34_RS10575;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337636.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 585209 585565 . - . ID=gene-CCO34_RS10580;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO34_RS10580;old_locus_tag=CCO34_10575 NZ_NPMD01000003.1 Protein Homology CDS 585209 585565 . - 0 ID=cds-WP_000544461.1;Parent=gene-CCO34_RS10580;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=CCO34_RS10580;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 585775 586236 . + . ID=gene-CCO34_RS10590;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=CCO34_RS10590;old_locus_tag=CCO34_10585 NZ_NPMD01000003.1 Protein Homology CDS 585775 586236 . + 0 ID=cds-WP_000158074.1;Parent=gene-CCO34_RS10590;Dbxref=GenBank:WP_000158074.1;Name=WP_000158074.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=CCO34_RS10590;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158074.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 586382 586990 . + . ID=gene-CCO34_RS10595;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=CCO34_RS10595;old_locus_tag=CCO34_10590 NZ_NPMD01000003.1 Protein Homology CDS 586382 586990 . + 0 ID=cds-WP_001079164.1;Parent=gene-CCO34_RS10595;Dbxref=GenBank:WP_001079164.1;Name=WP_001079164.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=CCO34_RS10595;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079164.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 586990 588816 . + . ID=gene-CCO34_RS10600;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=CCO34_RS10600;old_locus_tag=CCO34_10595 NZ_NPMD01000003.1 Protein Homology CDS 586990 588816 . + 0 ID=cds-WP_000097036.1;Parent=gene-CCO34_RS10600;Dbxref=GenBank:WP_000097036.1;Name=WP_000097036.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=CCO34_RS10600;product=formate hydrogenlyase subunit 3;protein_id=WP_000097036.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 588819 589742 . + . ID=gene-CCO34_RS10605;Name=CCO34_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10605;old_locus_tag=CCO34_10600 NZ_NPMD01000003.1 Protein Homology CDS 588819 589742 . + 0 ID=cds-WP_000110563.1;Parent=gene-CCO34_RS10605;Dbxref=GenBank:WP_000110563.1;Name=WP_000110563.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=CCO34_RS10605;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110563.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 589760 591469 . + . ID=gene-CCO34_RS10610;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=CCO34_RS10610;old_locus_tag=CCO34_10605 NZ_NPMD01000003.1 Protein Homology CDS 589760 591469 . + 0 ID=cds-WP_001288152.1;Parent=gene-CCO34_RS10610;Dbxref=GenBank:WP_001288152.1;Name=WP_001288152.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=CCO34_RS10610;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288152.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 591479 592021 . + . ID=gene-CCO34_RS10615;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=CCO34_RS10615;old_locus_tag=CCO34_10610 NZ_NPMD01000003.1 Protein Homology CDS 591479 592021 . + 0 ID=cds-WP_000493767.1;Parent=gene-CCO34_RS10615;Dbxref=GenBank:WP_000493767.1;Name=WP_000493767.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=CCO34_RS10615;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493767.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 592021 592788 . + . ID=gene-CCO34_RS10620;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=CCO34_RS10620;old_locus_tag=CCO34_10615 NZ_NPMD01000003.1 Protein Homology CDS 592021 592788 . + 0 ID=cds-WP_000067419.1;Parent=gene-CCO34_RS10620;Dbxref=GenBank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=CCO34_RS10620;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 592785 593195 . + . ID=gene-CCO34_RS10625;Name=CCO34_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10625;old_locus_tag=CCO34_10620 NZ_NPMD01000003.1 Protein Homology CDS 592785 593195 . + 0 ID=cds-WP_000003725.1;Parent=gene-CCO34_RS10625;Dbxref=GenBank:WP_000003725.1;Name=WP_000003725.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=CCO34_RS10625;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003725.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 593188 593658 . + . ID=gene-CCO34_RS10630;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=CCO34_RS10630;old_locus_tag=CCO34_10625 NZ_NPMD01000003.1 Protein Homology CDS 593188 593658 . + 0 ID=cds-WP_000132983.1;Parent=gene-CCO34_RS10630;Dbxref=GenBank:WP_000132983.1;Name=WP_000132983.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=CCO34_RS10630;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132983.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 593685 594494 . + . ID=gene-CCO34_RS10635;Name=CCO34_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10635;old_locus_tag=CCO34_10630 NZ_NPMD01000003.1 Protein Homology CDS 593685 594494 . + 0 ID=cds-WP_000936687.1;Parent=gene-CCO34_RS10635;Dbxref=GenBank:WP_000936687.1;Name=WP_000936687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=CCO34_RS10635;product=hypothetical protein;protein_id=WP_000936687.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 594695 595240 . + . ID=gene-CCO34_RS10640;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=CCO34_RS10640;old_locus_tag=CCO34_10635 NZ_NPMD01000003.1 Protein Homology CDS 594695 595240 . + 0 ID=cds-WP_001078791.1;Parent=gene-CCO34_RS10640;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=CCO34_RS10640;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 595386 597626 . + . ID=gene-CCO34_RS10645;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=CCO34_RS10645;old_locus_tag=CCO34_10640 NZ_NPMD01000003.1 Protein Homology CDS 595386 597626 . + 0 ID=cds-WP_000963444.1;Parent=gene-CCO34_RS10645;Dbxref=GenBank:WP_000963444.1;Name=WP_000963444.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=CCO34_RS10645;product=carbamoyltransferase HypF;protein_id=WP_000963444.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 597723 598856 . - . ID=gene-CCO34_RS10650;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=CCO34_RS10650;old_locus_tag=CCO34_10645 NZ_NPMD01000003.1 Protein Homology CDS 597723 598856 . - 0 ID=cds-WP_000086334.1;Parent=gene-CCO34_RS10650;Dbxref=GenBank:WP_000086334.1;Name=WP_000086334.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=CCO34_RS10650;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000086334.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 598853 600292 . - . ID=gene-CCO34_RS10655;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=CCO34_RS10655;old_locus_tag=CCO34_10650 NZ_NPMD01000003.1 Protein Homology CDS 598853 600292 . - 0 ID=cds-WP_000025991.1;Parent=gene-CCO34_RS10655;Dbxref=GenBank:WP_000025991.1;Name=WP_000025991.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=CCO34_RS10655;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000025991.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 600478 601998 . + . ID=gene-CCO34_RS10660;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=CCO34_RS10660;old_locus_tag=CCO34_10655 NZ_NPMD01000003.1 Protein Homology CDS 600478 601998 . + 0 ID=cds-WP_000010819.1;Parent=gene-CCO34_RS10660;Dbxref=GenBank:WP_000010819.1;Name=WP_000010819.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=CCO34_RS10660;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010819.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 601995 602960 . - . ID=gene-CCO34_RS10665;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=CCO34_RS10665;old_locus_tag=CCO34_10660 NZ_NPMD01000003.1 Protein Homology CDS 601995 602960 . - 0 ID=cds-WP_001278212.1;Parent=gene-CCO34_RS10665;Dbxref=GenBank:WP_001278212.1;Name=WP_001278212.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=CCO34_RS10665;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278212.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 602953 603726 . - . ID=gene-CCO34_RS10670;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=CCO34_RS10670;old_locus_tag=CCO34_10665 NZ_NPMD01000003.1 Protein Homology CDS 602953 603726 . - 0 ID=cds-WP_000804536.1;Parent=gene-CCO34_RS10670;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=CCO34_RS10670;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 603924 604283 . - . ID=gene-CCO34_RS10675;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=CCO34_RS10675;old_locus_tag=CCO34_10670 NZ_NPMD01000003.1 Protein Homology CDS 603924 604283 . - 0 ID=cds-WP_000255198.1;Parent=gene-CCO34_RS10675;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=CCO34_RS10675;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 604360 605139 . - . ID=gene-CCO34_RS10680;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=CCO34_RS10680;old_locus_tag=CCO34_10675 NZ_NPMD01000003.1 Protein Homology CDS 604360 605139 . - 0 ID=cds-WP_001077372.1;Parent=gene-CCO34_RS10680;Dbxref=GenBank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=CCO34_RS10680;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 605151 605513 . - . ID=gene-CCO34_RS10685;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=CCO34_RS10685;old_locus_tag=CCO34_10680 NZ_NPMD01000003.1 Protein Homology CDS 605151 605513 . - 0 ID=cds-WP_000111555.1;Parent=gene-CCO34_RS10685;Dbxref=GenBank:WP_000111555.1;Name=WP_000111555.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=CCO34_RS10685;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111555.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 605525 606496 . - . ID=gene-CCO34_RS10690;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=CCO34_RS10690;old_locus_tag=CCO34_10685 NZ_NPMD01000003.1 Protein Homology CDS 605525 606496 . - 0 ID=cds-WP_000199039.1;Parent=gene-CCO34_RS10690;Dbxref=GenBank:WP_000199039.1;Name=WP_000199039.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=CCO34_RS10690;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199039.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 606493 607056 . - . ID=gene-CCO34_RS10695;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=CCO34_RS10695;old_locus_tag=CCO34_10690 NZ_NPMD01000003.1 Protein Homology CDS 606493 607056 . - 0 ID=cds-WP_000573335.1;Parent=gene-CCO34_RS10695;Dbxref=GenBank:WP_000573335.1;Name=WP_000573335.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=CCO34_RS10695;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573335.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 607310 608389 . + . ID=gene-CCO34_RS10700;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=CCO34_RS10700;old_locus_tag=CCO34_10695 NZ_NPMD01000003.1 Protein Homology CDS 607310 608389 . + 0 ID=cds-WP_000476828.1;Parent=gene-CCO34_RS10700;Dbxref=GenBank:WP_000476828.1;Name=WP_000476828.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=CCO34_RS10700;product=lytic murein transglycosylase B;protein_id=WP_000476828.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 608426 608671 . - . ID=gene-CCO34_RS25785;Name=CCO34_RS25785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25785;old_locus_tag=CCO34_10700 NZ_NPMD01000003.1 Protein Homology CDS 608426 608671 . - 0 ID=cds-WP_001519391.1;Parent=gene-CCO34_RS25785;Dbxref=GenBank:WP_001519391.1;Name=WP_001519391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=CCO34_RS25785;product=hypothetical protein;protein_id=WP_001519391.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 608867 609364 . + . ID=gene-CCO34_RS10710;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=CCO34_RS10710;old_locus_tag=CCO34_10705 NZ_NPMD01000003.1 Protein Homology CDS 608867 609364 . + 0 ID=cds-WP_000132239.1;Parent=gene-CCO34_RS10710;Dbxref=GenBank:WP_000132239.1;Name=WP_000132239.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=CCO34_RS10710;product=nicotinamide-nucleotide amidase;protein_id=WP_000132239.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 609449 610510 . + . ID=gene-CCO34_RS10715;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CCO34_RS10715;old_locus_tag=CCO34_10710 NZ_NPMD01000003.1 Protein Homology CDS 609449 610510 . + 0 ID=cds-WP_000963150.1;Parent=gene-CCO34_RS10715;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=CCO34_RS10715;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 610627 611127 . + . ID=gene-CCO34_RS10720;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CCO34_RS10720;old_locus_tag=CCO34_10715 NZ_NPMD01000003.1 Protein Homology CDS 610627 611127 . + 0 ID=cds-WP_001294863.1;Parent=gene-CCO34_RS10720;Dbxref=GenBank:WP_001294863.1;Name=WP_001294863.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=CCO34_RS10720;product=recombination regulator RecX;protein_id=WP_001294863.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 611363 613993 . + . ID=gene-CCO34_RS10730;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CCO34_RS10730;old_locus_tag=CCO34_10725 NZ_NPMD01000003.1 Protein Homology CDS 611363 613993 . + 0 ID=cds-WP_000047228.1;Parent=gene-CCO34_RS10730;Dbxref=GenBank:WP_000047228.1;Name=WP_000047228.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=CCO34_RS10730;product=alanine--tRNA ligase;protein_id=WP_000047228.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 614228 614413 . + . ID=gene-CCO34_RS10735;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=CCO34_RS10735;old_locus_tag=CCO34_10730 NZ_NPMD01000003.1 Protein Homology CDS 614228 614413 . + 0 ID=cds-WP_000906486.1;Parent=gene-CCO34_RS10735;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=CCO34_RS10735;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_NPMD01000003.1 RefSeq gene 614717 614809 . + . ID=gene-CCO34_RS10745;Name=CCO34_RS10745;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS10745;old_locus_tag=CCO34_10740 NZ_NPMD01000003.1 tRNAscan-SE tRNA 614717 614809 . + . ID=rna-CCO34_RS10745;Parent=gene-CCO34_RS10745;anticodon=(pos:614751..614753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS10745;product=tRNA-Ser NZ_NPMD01000003.1 tRNAscan-SE exon 614717 614809 . + . ID=exon-CCO34_RS10745-1;Parent=rna-CCO34_RS10745;anticodon=(pos:614751..614753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS10745;product=tRNA-Ser NZ_NPMD01000003.1 RefSeq gene 614813 614889 . + . ID=gene-CCO34_RS10750;Name=CCO34_RS10750;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS10750;old_locus_tag=CCO34_10745 NZ_NPMD01000003.1 tRNAscan-SE tRNA 614813 614889 . + . ID=rna-CCO34_RS10750;Parent=gene-CCO34_RS10750;anticodon=(pos:614847..614849);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS10750;product=tRNA-Arg NZ_NPMD01000003.1 tRNAscan-SE exon 614813 614889 . + . ID=exon-CCO34_RS10750-1;Parent=rna-CCO34_RS10750;anticodon=(pos:614847..614849);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS10750;product=tRNA-Arg NZ_NPMD01000003.1 RefSeq gene 614951 615027 . + . ID=gene-CCO34_RS10755;Name=CCO34_RS10755;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS10755;old_locus_tag=CCO34_10750 NZ_NPMD01000003.1 tRNAscan-SE tRNA 614951 615027 . + . ID=rna-CCO34_RS10755;Parent=gene-CCO34_RS10755;anticodon=(pos:614985..614987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS10755;product=tRNA-Arg NZ_NPMD01000003.1 tRNAscan-SE exon 614951 615027 . + . ID=exon-CCO34_RS10755-1;Parent=rna-CCO34_RS10755;anticodon=(pos:614985..614987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS10755;product=tRNA-Arg ##sequence-region NZ_NPMD01000030.1 1 1669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000030.1 RefSeq region 1 1669 . + . ID=NZ_NPMD01000030.1:1..1669;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000030.1 RefSeq gene 79 1620 . + . ID=gene-CCO34_RS25115;Name=CCO34_RS25115;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO34_RS25115;old_locus_tag=CCO34_25100 NZ_NPMD01000030.1 cmsearch rRNA 79 1620 . + . ID=rna-CCO34_RS25115;Parent=gene-CCO34_RS25115;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25115;product=16S ribosomal RNA NZ_NPMD01000030.1 cmsearch exon 79 1620 . + . ID=exon-CCO34_RS25115-1;Parent=rna-CCO34_RS25115;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25115;product=16S ribosomal RNA ##sequence-region NZ_NPMD01000031.1 1 1274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000031.1 RefSeq region 1 1274 . + . ID=NZ_NPMD01000031.1:1..1274;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000031.1 RefSeq gene 1 1274 . - . ID=gene-CCO34_RS25120;Name=CCO34_RS25120;end_range=1274,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO34_RS25120;old_locus_tag=CCO34_25105;partial=true;start_range=.,1 NZ_NPMD01000031.1 cmsearch rRNA 1 1274 . - . ID=rna-CCO34_RS25120;Parent=gene-CCO34_RS25120;Dbxref=RFAM:RF02541;end_range=1274,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25120;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMD01000031.1 cmsearch exon 1 1274 . - . ID=exon-CCO34_RS25120-1;Parent=rna-CCO34_RS25120;Dbxref=RFAM:RF02541;end_range=1274,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25120;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPMD01000032.1 1 1226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000032.1 RefSeq region 1 1226 . + . ID=NZ_NPMD01000032.1:1..1226;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000032.1 RefSeq gene 4 1226 . - . ID=gene-CCO34_RS25125;Name=CCO34_RS25125;end_range=1226,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25125;old_locus_tag=CCO34_25110;partial=true NZ_NPMD01000032.1 Protein Homology CDS 908 1226 . - 0 ID=cds-WP_094965707.1;Parent=gene-CCO34_RS25125;Dbxref=GenBank:WP_094965707.1;Name=WP_094965707.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;end_range=1226,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO34_RS25125;partial=true;product=IS3-like element ISSen1 family transposase;protein_id=WP_094965707.1;transl_table=11 NZ_NPMD01000032.1 Protein Homology CDS 4 908 . - 2 ID=cds-WP_094965707.1;Parent=gene-CCO34_RS25125;Dbxref=GenBank:WP_094965707.1;Name=WP_094965707.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO34_RS25125;partial=true;product=IS3-like element ISSen1 family transposase;protein_id=WP_094965707.1;transl_table=11 ##sequence-region NZ_NPMD01000033.1 1 1061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000033.1 RefSeq region 1 1061 . + . ID=NZ_NPMD01000033.1:1..1061;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000033.1 RefSeq gene 1 758 . + . ID=gene-CCO34_RS25130;Name=CCO34_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25130;old_locus_tag=CCO34_25115;partial=true;start_range=.,1 NZ_NPMD01000033.1 Protein Homology CDS 1 758 . + 2 ID=cds-WP_140428496.1;Parent=gene-CCO34_RS25130;Dbxref=GenBank:WP_140428496.1;Name=WP_140428496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751770.1;locus_tag=CCO34_RS25130;partial=true;product=hypothetical protein;protein_id=WP_140428496.1;start_range=.,1;transl_table=11 ##sequence-region NZ_NPMD01000034.1 1 1019 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000034.1 RefSeq region 1 1019 . + . ID=NZ_NPMD01000034.1:1..1019;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000034.1 RefSeq gene 1 1019 . + . ID=gene-CCO34_RS25135;Name=tuf;end_range=1019,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CCO34_RS25135;old_locus_tag=CCO34_25120;partial=true;start_range=.,1 NZ_NPMD01000034.1 Protein Homology CDS 1 1019 . + 0 ID=cds-WP_001543627.1;Parent=gene-CCO34_RS25135;Dbxref=GenBank:WP_001543627.1;Name=WP_001543627.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=1019,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=CCO34_RS25135;partial=true;product=elongation factor Tu;protein_id=WP_001543627.1;start_range=.,1;transl_table=11 ##sequence-region NZ_NPMD01000035.1 1 864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000035.1 RefSeq region 1 864 . + . ID=NZ_NPMD01000035.1:1..864;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000035.1 RefSeq gene 1 449 . + . ID=gene-CCO34_RS25140;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=CCO34_RS25140;old_locus_tag=CCO34_25125;partial=true;start_range=.,1 NZ_NPMD01000035.1 Protein Homology CDS 1 449 . + 2 ID=cds-WP_094965709.1;Parent=gene-CCO34_RS25140;Dbxref=GenBank:WP_094965709.1;Name=WP_094965709.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=CCO34_RS25140;partial=true;product=heme exporter protein CcmB;protein_id=WP_094965709.1;start_range=.,1;transl_table=11 NZ_NPMD01000035.1 RefSeq gene 501 864 . + . ID=gene-CCO34_RS25145;Name=ccsA;end_range=864,.;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=CCO34_RS25145;old_locus_tag=CCO34_25130;partial=true NZ_NPMD01000035.1 Protein Homology CDS 501 864 . + 0 ID=cds-WP_165418611.1;Parent=gene-CCO34_RS25145;Dbxref=GenBank:WP_165418611.1;Name=WP_165418611.1;Ontology_term=GO:0017004,GO:0020037;end_range=864,.;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO34_RS25145;partial=true;product=cytochrome c biogenesis protein CcsA;protein_id=WP_165418611.1;transl_table=11 ##sequence-region NZ_NPMD01000036.1 1 854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000036.1 RefSeq region 1 854 . + . ID=NZ_NPMD01000036.1:1..854;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000036.1 RefSeq gene 1 265 . - . ID=gene-CCO34_RS25150;Name=CCO34_RS25150;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO34_RS25150;old_locus_tag=CCO34_25135;partial=true;start_range=.,1 NZ_NPMD01000036.1 cmsearch rRNA 1 265 . - . ID=rna-CCO34_RS25150;Parent=gene-CCO34_RS25150;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25150;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMD01000036.1 cmsearch exon 1 265 . - . ID=exon-CCO34_RS25150-1;Parent=rna-CCO34_RS25150;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25150;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMD01000036.1 RefSeq gene 446 521 . - . ID=gene-CCO34_RS25155;Name=CCO34_RS25155;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS25155;old_locus_tag=CCO34_25140 NZ_NPMD01000036.1 tRNAscan-SE tRNA 446 521 . - . ID=rna-CCO34_RS25155;Parent=gene-CCO34_RS25155;anticodon=(pos:complement(486..488));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25155;product=tRNA-Ala NZ_NPMD01000036.1 tRNAscan-SE exon 446 521 . - . ID=exon-CCO34_RS25155-1;Parent=rna-CCO34_RS25155;anticodon=(pos:complement(486..488));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25155;product=tRNA-Ala NZ_NPMD01000036.1 RefSeq gene 631 707 . - . ID=gene-CCO34_RS25160;Name=CCO34_RS25160;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS25160;old_locus_tag=CCO34_25145 NZ_NPMD01000036.1 tRNAscan-SE tRNA 631 707 . - . ID=rna-CCO34_RS25160;Parent=gene-CCO34_RS25160;anticodon=(pos:complement(671..673));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25160;product=tRNA-Ile NZ_NPMD01000036.1 tRNAscan-SE exon 631 707 . - . ID=exon-CCO34_RS25160-1;Parent=rna-CCO34_RS25160;anticodon=(pos:complement(671..673));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25160;product=tRNA-Ile NZ_NPMD01000036.1 RefSeq gene 777 854 . - . ID=gene-CCO34_RS25165;Name=CCO34_RS25165;end_range=854,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO34_RS25165;old_locus_tag=CCO34_25150;partial=true NZ_NPMD01000036.1 cmsearch rRNA 777 854 . - . ID=rna-CCO34_RS25165;Parent=gene-CCO34_RS25165;Dbxref=RFAM:RF00177;end_range=854,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25165;partial=true;product=16S ribosomal RNA NZ_NPMD01000036.1 cmsearch exon 777 854 . - . ID=exon-CCO34_RS25165-1;Parent=rna-CCO34_RS25165;Dbxref=RFAM:RF00177;end_range=854,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25165;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPMD01000037.1 1 788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000037.1 RefSeq region 1 788 . + . ID=NZ_NPMD01000037.1:1..788;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000037.1 RefSeq pseudogene 1 675 . + . ID=gene-CCO34_RS25170;Name=CCO34_RS25170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25170;old_locus_tag=CCO34_25155;partial=true;pseudo=true;start_range=.,1 NZ_NPMD01000037.1 Protein Homology CDS 1 675 . + 0 ID=cds-CCO34_RS25170;Parent=gene-CCO34_RS25170;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001721460.1;locus_tag=CCO34_RS25170;partial=true;product=shikimate transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_NPMD01000037.1 RefSeq pseudogene 690 788 . + . ID=gene-CCO34_RS26295;Name=CCO34_RS26295;end_range=788,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26295;partial=true;pseudo=true NZ_NPMD01000037.1 Protein Homology CDS 690 788 . + 0 ID=cds-CCO34_RS26295;Parent=gene-CCO34_RS26295;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701868.1;locus_tag=CCO34_RS26295;partial=true;product=DUF4376 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_NPMD01000038.1 1 697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000038.1 RefSeq region 1 697 . + . ID=NZ_NPMD01000038.1:1..697;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000038.1 RefSeq gene 1 265 . - . ID=gene-CCO34_RS25175;Name=CCO34_RS25175;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO34_RS25175;old_locus_tag=CCO34_25160;partial=true;start_range=.,1 NZ_NPMD01000038.1 cmsearch rRNA 1 265 . - . ID=rna-CCO34_RS25175;Parent=gene-CCO34_RS25175;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25175;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMD01000038.1 cmsearch exon 1 265 . - . ID=exon-CCO34_RS25175-1;Parent=rna-CCO34_RS25175;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25175;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMD01000038.1 RefSeq gene 459 534 . - . ID=gene-CCO34_RS25180;Name=CCO34_RS25180;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS25180;old_locus_tag=CCO34_25165 NZ_NPMD01000038.1 tRNAscan-SE tRNA 459 534 . - . ID=rna-CCO34_RS25180;Parent=gene-CCO34_RS25180;anticodon=(pos:complement(498..500));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25180;product=tRNA-Glu NZ_NPMD01000038.1 tRNAscan-SE exon 459 534 . - . ID=exon-CCO34_RS25180-1;Parent=rna-CCO34_RS25180;anticodon=(pos:complement(498..500));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25180;product=tRNA-Glu NZ_NPMD01000038.1 RefSeq gene 620 697 . - . ID=gene-CCO34_RS25185;Name=CCO34_RS25185;end_range=697,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO34_RS25185;old_locus_tag=CCO34_25170;partial=true NZ_NPMD01000038.1 cmsearch rRNA 620 697 . - . ID=rna-CCO34_RS25185;Parent=gene-CCO34_RS25185;Dbxref=RFAM:RF00177;end_range=697,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25185;partial=true;product=16S ribosomal RNA NZ_NPMD01000038.1 cmsearch exon 620 697 . - . ID=exon-CCO34_RS25185-1;Parent=rna-CCO34_RS25185;Dbxref=RFAM:RF00177;end_range=697,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25185;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPMD01000039.1 1 608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000039.1 RefSeq region 1 608 . + . ID=NZ_NPMD01000039.1:1..608;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000039.1 RefSeq gene 1 608 . + . ID=gene-CCO34_RS25190;Name=CCO34_RS25190;end_range=608,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO34_RS25190;old_locus_tag=CCO34_25175;partial=true;start_range=.,1 NZ_NPMD01000039.1 cmsearch rRNA 1 608 . + . ID=rna-CCO34_RS25190;Parent=gene-CCO34_RS25190;Dbxref=RFAM:RF02541;end_range=608,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25190;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMD01000039.1 cmsearch exon 1 608 . + . ID=exon-CCO34_RS25190-1;Parent=rna-CCO34_RS25190;Dbxref=RFAM:RF02541;end_range=608,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25190;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPMD01000004.1 1 421503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000004.1 RefSeq region 1 421503 . + . ID=NZ_NPMD01000004.1:1..421503;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000004.1 RefSeq gene 1 1726 . - . ID=gene-CCO34_RS10760;Name=CCO34_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10760;old_locus_tag=CCO34_10755;partial=true;start_range=.,1 NZ_NPMD01000004.1 Protein Homology CDS 1 1726 . - 0 ID=cds-WP_140428474.1;Parent=gene-CCO34_RS10760;Dbxref=GenBank:WP_140428474.1;Name=WP_140428474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001609955.1;locus_tag=CCO34_RS10760;partial=true;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_140428474.1;start_range=.,1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 1790 2371 . - . ID=gene-CCO34_RS10765;Name=CCO34_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10765;old_locus_tag=CCO34_10760 NZ_NPMD01000004.1 Protein Homology CDS 1790 2371 . - 0 ID=cds-WP_094965420.1;Parent=gene-CCO34_RS10765;Dbxref=GenBank:WP_094965420.1;Name=WP_094965420.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235231.1;locus_tag=CCO34_RS10765;product=tail fiber assembly protein;protein_id=WP_094965420.1;transl_table=11 NZ_NPMD01000004.1 RefSeq pseudogene 2588 3142 . - . ID=gene-CCO34_RS25790;Name=CCO34_RS25790;end_range=3142,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25790;partial=true;pseudo=true NZ_NPMD01000004.1 Protein Homology CDS 2588 3142 . - 0 ID=cds-CCO34_RS25790;Parent=gene-CCO34_RS25790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3142,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459903.1;locus_tag=CCO34_RS25790;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 3907 4533 . - . ID=gene-CCO34_RS10775;Name=CCO34_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10775;old_locus_tag=CCO34_10770 NZ_NPMD01000004.1 Protein Homology CDS 3907 4533 . - 0 ID=cds-WP_058107721.1;Parent=gene-CCO34_RS10775;Dbxref=GenBank:WP_058107721.1;Name=WP_058107721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199728.1;locus_tag=CCO34_RS10775;product=hypothetical protein;protein_id=WP_058107721.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 4517 5743 . - . ID=gene-CCO34_RS10780;Name=CCO34_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10780;old_locus_tag=CCO34_10775 NZ_NPMD01000004.1 Protein Homology CDS 4517 5743 . - 0 ID=cds-WP_094965422.1;Parent=gene-CCO34_RS10780;Dbxref=GenBank:WP_094965422.1;Name=WP_094965422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290027.1;locus_tag=CCO34_RS10780;product=baseplate J/gp47 family protein;protein_id=WP_094965422.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 5770 6372 . + . ID=gene-CCO34_RS10785;Name=CCO34_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10785;old_locus_tag=CCO34_10780 NZ_NPMD01000004.1 GeneMarkS-2+ CDS 5770 6372 . + 0 ID=cds-WP_094965423.1;Parent=gene-CCO34_RS10785;Dbxref=GenBank:WP_094965423.1;Name=WP_094965423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS10785;product=hypothetical protein;protein_id=WP_094965423.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 6648 7214 . + . ID=gene-CCO34_RS10790;Name=CCO34_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10790;old_locus_tag=CCO34_10785 NZ_NPMD01000004.1 Protein Homology CDS 6648 7214 . + 0 ID=cds-WP_094965424.1;Parent=gene-CCO34_RS10790;Dbxref=GenBank:WP_094965424.1;Name=WP_094965424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421086.1;locus_tag=CCO34_RS10790;product=antA/AntB antirepressor family protein;protein_id=WP_094965424.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 7244 7660 . - . ID=gene-CCO34_RS10795;Name=CCO34_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10795;old_locus_tag=CCO34_10790 NZ_NPMD01000004.1 Protein Homology CDS 7244 7660 . - 0 ID=cds-WP_094965425.1;Parent=gene-CCO34_RS10795;Dbxref=GenBank:WP_094965425.1;Name=WP_094965425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151598.1;locus_tag=CCO34_RS10795;product=type II toxin-antitoxin system YafO family toxin;protein_id=WP_094965425.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 7662 8234 . - . ID=gene-CCO34_RS10800;Name=CCO34_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10800;old_locus_tag=CCO34_10795 NZ_NPMD01000004.1 Protein Homology CDS 7662 8234 . - 0 ID=cds-WP_094965426.1;Parent=gene-CCO34_RS10800;Dbxref=GenBank:WP_094965426.1;Name=WP_094965426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974309.1;locus_tag=CCO34_RS10800;product=hypothetical protein;protein_id=WP_094965426.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 8351 8698 . - . ID=gene-CCO34_RS10805;Name=CCO34_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10805;old_locus_tag=CCO34_10800 NZ_NPMD01000004.1 Protein Homology CDS 8351 8698 . - 0 ID=cds-WP_094965427.1;Parent=gene-CCO34_RS10805;Dbxref=GenBank:WP_094965427.1;Name=WP_094965427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001261328.1;locus_tag=CCO34_RS10805;product=hypothetical protein;protein_id=WP_094965427.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 9015 9728 . - . ID=gene-CCO34_RS10815;Name=CCO34_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10815;old_locus_tag=CCO34_10810 NZ_NPMD01000004.1 Protein Homology CDS 9015 9728 . - 0 ID=cds-WP_094965428.1;Parent=gene-CCO34_RS10815;Dbxref=GenBank:WP_094965428.1;Name=WP_094965428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063617.1;locus_tag=CCO34_RS10815;product=phage baseplate protein;protein_id=WP_094965428.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 9728 10735 . - . ID=gene-CCO34_RS10820;Name=CCO34_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10820;old_locus_tag=CCO34_10815 NZ_NPMD01000004.1 Protein Homology CDS 9728 10735 . - 0 ID=cds-WP_094965429.1;Parent=gene-CCO34_RS10820;Dbxref=GenBank:WP_094965429.1;Name=WP_094965429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421083.1;locus_tag=CCO34_RS10820;product=hypothetical protein;protein_id=WP_094965429.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 10735 11001 . - . ID=gene-CCO34_RS10825;Name=CCO34_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10825;old_locus_tag=CCO34_10820 NZ_NPMD01000004.1 Protein Homology CDS 10735 11001 . - 0 ID=cds-WP_094965430.1;Parent=gene-CCO34_RS10825;Dbxref=GenBank:WP_094965430.1;Name=WP_094965430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209259.1;locus_tag=CCO34_RS10825;product=hypothetical protein;protein_id=WP_094965430.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 10998 11666 . - . ID=gene-CCO34_RS10830;Name=CCO34_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10830;old_locus_tag=CCO34_10825 NZ_NPMD01000004.1 Protein Homology CDS 10998 11666 . - 0 ID=cds-WP_094965431.1;Parent=gene-CCO34_RS10830;Dbxref=GenBank:WP_094965431.1;Name=WP_094965431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421081.1;locus_tag=CCO34_RS10830;product=hypothetical protein;protein_id=WP_094965431.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 11670 13763 . - . ID=gene-CCO34_RS10835;Name=CCO34_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10835;old_locus_tag=CCO34_10830 NZ_NPMD01000004.1 Protein Homology CDS 11670 13763 . - 0 ID=cds-WP_094965432.1;Parent=gene-CCO34_RS10835;Dbxref=GenBank:WP_094965432.1;Name=WP_094965432.1;Ontology_term=GO:0000270,GO:0071555,GO:0008933,GO:0016787;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918397.1;locus_tag=CCO34_RS10835;product=lytic transglycosylase domain-containing protein;protein_id=WP_094965432.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 13828 14445 . - . ID=gene-CCO34_RS10840;Name=CCO34_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10840;old_locus_tag=CCO34_10835 NZ_NPMD01000004.1 Protein Homology CDS 13828 14445 . - 0 ID=cds-WP_094965433.1;Parent=gene-CCO34_RS10840;Dbxref=GenBank:WP_094965433.1;Name=WP_094965433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684989.1;locus_tag=CCO34_RS10840;product=hypothetical protein;protein_id=WP_094965433.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 14442 14873 . - . ID=gene-CCO34_RS10845;Name=CCO34_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10845;old_locus_tag=CCO34_10840 NZ_NPMD01000004.1 Protein Homology CDS 14442 14873 . - 0 ID=cds-WP_094965434.1;Parent=gene-CCO34_RS10845;Dbxref=GenBank:WP_094965434.1;Name=WP_094965434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613368.1;locus_tag=CCO34_RS10845;product=hypothetical protein;protein_id=WP_094965434.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 14897 16234 . - . ID=gene-CCO34_RS10850;Name=CCO34_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10850;old_locus_tag=CCO34_10845 NZ_NPMD01000004.1 Protein Homology CDS 14897 16234 . - 0 ID=cds-WP_094965435.1;Parent=gene-CCO34_RS10850;Dbxref=GenBank:WP_094965435.1;Name=WP_094965435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000506598.1;locus_tag=CCO34_RS10850;product=hypothetical protein;protein_id=WP_094965435.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 16234 17178 . - . ID=gene-CCO34_RS10855;Name=CCO34_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10855;old_locus_tag=CCO34_10850 NZ_NPMD01000004.1 Protein Homology CDS 16234 17178 . - 0 ID=cds-WP_094965436.1;Parent=gene-CCO34_RS10855;Dbxref=GenBank:WP_094965436.1;Name=WP_094965436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001139501.1;locus_tag=CCO34_RS10855;product=hypothetical protein;protein_id=WP_094965436.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 17165 17605 . - . ID=gene-CCO34_RS10860;Name=CCO34_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10860;old_locus_tag=CCO34_10855 NZ_NPMD01000004.1 Protein Homology CDS 17165 17605 . - 0 ID=cds-WP_094965457.1;Parent=gene-CCO34_RS10860;Dbxref=GenBank:WP_094965457.1;Name=WP_094965457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421076.1;locus_tag=CCO34_RS10860;product=hypothetical protein;protein_id=WP_094965457.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 17602 18042 . - . ID=gene-CCO34_RS10865;Name=CCO34_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10865;old_locus_tag=CCO34_10860 NZ_NPMD01000004.1 Protein Homology CDS 17602 18042 . - 0 ID=cds-WP_094965437.1;Parent=gene-CCO34_RS10865;Dbxref=GenBank:WP_094965437.1;Name=WP_094965437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175373.1;locus_tag=CCO34_RS10865;product=hypothetical protein;protein_id=WP_094965437.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 18042 18512 . - . ID=gene-CCO34_RS10870;Name=CCO34_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10870;old_locus_tag=CCO34_10865 NZ_NPMD01000004.1 Protein Homology CDS 18042 18512 . - 0 ID=cds-WP_000780862.1;Parent=gene-CCO34_RS10870;Dbxref=GenBank:WP_000780862.1;Name=WP_000780862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001507253.1;locus_tag=CCO34_RS10870;product=hypothetical protein;protein_id=WP_000780862.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 18571 19599 . - . ID=gene-CCO34_RS10875;Name=CCO34_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10875;old_locus_tag=CCO34_10870 NZ_NPMD01000004.1 Protein Homology CDS 18571 19599 . - 0 ID=cds-WP_001272364.1;Parent=gene-CCO34_RS10875;Dbxref=GenBank:WP_001272364.1;Name=WP_001272364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774834.1;locus_tag=CCO34_RS10875;product=hypothetical protein;protein_id=WP_001272364.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 19614 20231 . - . ID=gene-CCO34_RS10880;Name=CCO34_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10880;old_locus_tag=CCO34_10875 NZ_NPMD01000004.1 Protein Homology CDS 19614 20231 . - 0 ID=cds-WP_001349881.1;Parent=gene-CCO34_RS10880;Dbxref=GenBank:WP_001349881.1;Name=WP_001349881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383990.1;locus_tag=CCO34_RS10880;product=hypothetical protein;protein_id=WP_001349881.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 20224 21546 . - . ID=gene-CCO34_RS10885;Name=CCO34_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10885;old_locus_tag=CCO34_10880 NZ_NPMD01000004.1 Protein Homology CDS 20224 21546 . - 0 ID=cds-WP_094965438.1;Parent=gene-CCO34_RS10885;Dbxref=GenBank:WP_094965438.1;Name=WP_094965438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000059665.1;locus_tag=CCO34_RS10885;product=DUF2213 domain-containing protein;protein_id=WP_094965438.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 21527 22360 . - . ID=gene-CCO34_RS10890;Name=CCO34_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10890;old_locus_tag=CCO34_10885 NZ_NPMD01000004.1 Protein Homology CDS 21527 22360 . - 0 ID=cds-WP_176452908.1;Parent=gene-CCO34_RS10890;Dbxref=GenBank:WP_176452908.1;Name=WP_176452908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018394.1;locus_tag=CCO34_RS10890;product=hypothetical protein;protein_id=WP_176452908.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 22305 23741 . - . ID=gene-CCO34_RS10895;Name=CCO34_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10895;old_locus_tag=CCO34_10890 NZ_NPMD01000004.1 Protein Homology CDS 22305 23741 . - 0 ID=cds-WP_094965439.1;Parent=gene-CCO34_RS10895;Dbxref=GenBank:WP_094965439.1;Name=WP_094965439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807716.1;locus_tag=CCO34_RS10895;product=anti-CBASS protein Acb1 family protein;protein_id=WP_094965439.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 23760 25088 . - . ID=gene-CCO34_RS10900;Name=CCO34_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10900;old_locus_tag=CCO34_10895 NZ_NPMD01000004.1 Protein Homology CDS 23760 25088 . - 0 ID=cds-WP_094965440.1;Parent=gene-CCO34_RS10900;Dbxref=GenBank:WP_094965440.1;Name=WP_094965440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001471377.1;locus_tag=CCO34_RS10900;product=terminase;protein_id=WP_094965440.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 25078 26169 . - . ID=gene-CCO34_RS10905;Name=CCO34_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10905;old_locus_tag=CCO34_10900 NZ_NPMD01000004.1 Protein Homology CDS 25078 26169 . - 0 ID=cds-WP_094965441.1;Parent=gene-CCO34_RS10905;Dbxref=GenBank:WP_094965441.1;Name=WP_094965441.1;Ontology_term=GO:0051276;gbkey=CDS;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089440.1;locus_tag=CCO34_RS10905;product=terminase small subunit;protein_id=WP_094965441.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 26173 26382 . - . ID=gene-CCO34_RS10910;Name=CCO34_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10910;old_locus_tag=CCO34_10905 NZ_NPMD01000004.1 Protein Homology CDS 26173 26382 . - 0 ID=cds-WP_031571075.1;Parent=gene-CCO34_RS10910;Dbxref=GenBank:WP_031571075.1;Name=WP_031571075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126789.1;locus_tag=CCO34_RS10910;product=hypothetical protein;protein_id=WP_031571075.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 26441 27292 . - . ID=gene-CCO34_RS10915;Name=CCO34_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10915;old_locus_tag=CCO34_10910 NZ_NPMD01000004.1 Protein Homology CDS 26441 27292 . - 0 ID=cds-WP_094965442.1;Parent=gene-CCO34_RS10915;Dbxref=GenBank:WP_094965442.1;Name=WP_094965442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204026.1;locus_tag=CCO34_RS10915;product=hypothetical protein;protein_id=WP_094965442.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 27282 28073 . - . ID=gene-CCO34_RS10920;Name=CCO34_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10920;old_locus_tag=CCO34_10915 NZ_NPMD01000004.1 Protein Homology CDS 27282 28073 . - 0 ID=cds-WP_031571071.1;Parent=gene-CCO34_RS10920;Dbxref=GenBank:WP_031571071.1;Name=WP_031571071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291106.1;locus_tag=CCO34_RS10920;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_031571071.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 28171 28362 . - . ID=gene-CCO34_RS10925;Name=CCO34_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10925;old_locus_tag=CCO34_10920 NZ_NPMD01000004.1 Protein Homology CDS 28171 28362 . - 0 ID=cds-WP_072010172.1;Parent=gene-CCO34_RS10925;Dbxref=GenBank:WP_072010172.1;Name=WP_072010172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287878.1;locus_tag=CCO34_RS10925;product=DUF4222 domain-containing protein;protein_id=WP_072010172.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 28441 28719 . + . ID=gene-CCO34_RS10930;Name=CCO34_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10930;old_locus_tag=CCO34_10925 NZ_NPMD01000004.1 GeneMarkS-2+ CDS 28441 28719 . + 0 ID=cds-WP_031571068.1;Parent=gene-CCO34_RS10930;Dbxref=GenBank:WP_031571068.1;Name=WP_031571068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS10930;product=hypothetical protein;protein_id=WP_031571068.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 28685 28867 . - . ID=gene-CCO34_RS25795;Name=CCO34_RS25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25795;old_locus_tag=CCO34_10930 NZ_NPMD01000004.1 Protein Homology CDS 28685 28867 . - 0 ID=cds-WP_044128563.1;Parent=gene-CCO34_RS25795;Dbxref=GenBank:WP_044128563.1;Name=WP_044128563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353217.1;locus_tag=CCO34_RS25795;product=hypothetical protein;protein_id=WP_044128563.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 28864 29409 . - . ID=gene-CCO34_RS10940;Name=CCO34_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10940;old_locus_tag=CCO34_10935 NZ_NPMD01000004.1 Protein Homology CDS 28864 29409 . - 0 ID=cds-WP_094965443.1;Parent=gene-CCO34_RS10940;Dbxref=GenBank:WP_094965443.1;Name=WP_094965443.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373039.1;locus_tag=CCO34_RS10940;product=glycoside hydrolase family 108 protein;protein_id=WP_094965443.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 29406 29687 . - . ID=gene-CCO34_RS10945;Name=CCO34_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10945;old_locus_tag=CCO34_10940 NZ_NPMD01000004.1 Protein Homology CDS 29406 29687 . - 0 ID=cds-WP_000445513.1;Parent=gene-CCO34_RS10945;Dbxref=GenBank:WP_000445513.1;Name=WP_000445513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445513.1;locus_tag=CCO34_RS10945;product=phage holin family protein;protein_id=WP_000445513.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 29677 30069 . - . ID=gene-CCO34_RS10950;Name=CCO34_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10950;old_locus_tag=CCO34_10945 NZ_NPMD01000004.1 Protein Homology CDS 29677 30069 . - 0 ID=cds-WP_021000216.1;Parent=gene-CCO34_RS10950;Dbxref=GenBank:WP_021000216.1;Name=WP_021000216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406273.1;locus_tag=CCO34_RS10950;product=putative holin;protein_id=WP_021000216.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 30159 30311 . - . ID=gene-CCO34_RS10955;Name=CCO34_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10955;old_locus_tag=CCO34_10950 NZ_NPMD01000004.1 Protein Homology CDS 30159 30311 . - 0 ID=cds-WP_021000215.1;Parent=gene-CCO34_RS10955;Dbxref=GenBank:WP_021000215.1;Name=WP_021000215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359668.1;locus_tag=CCO34_RS10955;product=DUF3927 family protein;protein_id=WP_021000215.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 30308 30733 . - . ID=gene-CCO34_RS10960;Name=CCO34_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10960;old_locus_tag=CCO34_10955 NZ_NPMD01000004.1 Protein Homology CDS 30308 30733 . - 0 ID=cds-WP_050161598.1;Parent=gene-CCO34_RS10960;Dbxref=GenBank:WP_050161598.1;Name=WP_050161598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901009.1;locus_tag=CCO34_RS10960;product=tellurite resistance TerB family protein;protein_id=WP_050161598.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 31770 31844 . - . ID=gene-CCO34_RS10965;Name=CCO34_RS10965;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS10965;old_locus_tag=CCO34_10960 NZ_NPMD01000004.1 tRNAscan-SE tRNA 31770 31844 . - . ID=rna-CCO34_RS10965;Parent=gene-CCO34_RS10965;anticodon=(pos:complement(31809..31811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS10965;product=tRNA-Gly NZ_NPMD01000004.1 tRNAscan-SE exon 31770 31844 . - . ID=exon-CCO34_RS10965-1;Parent=rna-CCO34_RS10965;anticodon=(pos:complement(31809..31811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS10965;product=tRNA-Gly NZ_NPMD01000004.1 RefSeq gene 31848 31923 . - . ID=gene-CCO34_RS10970;Name=CCO34_RS10970;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS10970;old_locus_tag=CCO34_10965 NZ_NPMD01000004.1 tRNAscan-SE tRNA 31848 31923 . - . ID=rna-CCO34_RS10970;Parent=gene-CCO34_RS10970;anticodon=(pos:complement(31888..31890));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS10970;product=tRNA-Thr NZ_NPMD01000004.1 tRNAscan-SE exon 31848 31923 . - . ID=exon-CCO34_RS10970-1;Parent=rna-CCO34_RS10970;anticodon=(pos:complement(31888..31890));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS10970;product=tRNA-Thr NZ_NPMD01000004.1 RefSeq gene 32289 32855 . - . ID=gene-CCO34_RS10975;Name=CCO34_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10975;old_locus_tag=CCO34_10970 NZ_NPMD01000004.1 Protein Homology CDS 32289 32855 . - 0 ID=cds-WP_031571058.1;Parent=gene-CCO34_RS10975;Dbxref=GenBank:WP_031571058.1;Name=WP_031571058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211429.1;locus_tag=CCO34_RS10975;product=ORF6N domain-containing protein;protein_id=WP_031571058.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 33128 33682 . - . ID=gene-CCO34_RS10985;Name=CCO34_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10985;old_locus_tag=CCO34_10980 NZ_NPMD01000004.1 Protein Homology CDS 33128 33682 . - 0 ID=cds-WP_094965444.1;Parent=gene-CCO34_RS10985;Dbxref=GenBank:WP_094965444.1;Name=WP_094965444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707252.1;locus_tag=CCO34_RS10985;product=DUF1133 family protein;protein_id=WP_094965444.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 33679 33969 . - . ID=gene-CCO34_RS10990;Name=CCO34_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10990;old_locus_tag=CCO34_10985 NZ_NPMD01000004.1 Protein Homology CDS 33679 33969 . - 0 ID=cds-WP_000774470.1;Parent=gene-CCO34_RS10990;Dbxref=GenBank:WP_000774470.1;Name=WP_000774470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707251.1;locus_tag=CCO34_RS10990;product=DUF1364 domain-containing protein;protein_id=WP_000774470.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 33969 34568 . - . ID=gene-CCO34_RS10995;Name=CCO34_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS10995;old_locus_tag=CCO34_10990 NZ_NPMD01000004.1 Protein Homology CDS 33969 34568 . - 0 ID=cds-WP_080172096.1;Parent=gene-CCO34_RS10995;Dbxref=GenBank:WP_080172096.1;Name=WP_080172096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=CCO34_RS10995;product=DUF1367 family protein;protein_id=WP_080172096.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 34631 34801 . - . ID=gene-CCO34_RS25550;Name=CCO34_RS25550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25550 NZ_NPMD01000004.1 Protein Homology CDS 34631 34801 . - 0 ID=cds-WP_000734094.1;Parent=gene-CCO34_RS25550;Dbxref=GenBank:WP_000734094.1;Name=WP_000734094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734094.1;locus_tag=CCO34_RS25550;product=hypothetical protein;protein_id=WP_000734094.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 35092 35247 . - . ID=gene-CCO34_RS11000;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;locus_tag=CCO34_RS11000;old_locus_tag=CCO34_10995 NZ_NPMD01000004.1 Protein Homology CDS 35092 35247 . - 0 ID=cds-WP_000813254.1;Parent=gene-CCO34_RS11000;Dbxref=GenBank:WP_000813254.1;Name=WP_000813254.1;gbkey=CDS;gene=hokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=CCO34_RS11000;product=type I toxin-antitoxin system toxin HokD;protein_id=WP_000813254.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 35539 35934 . - . ID=gene-CCO34_RS11005;Name=CCO34_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11005;old_locus_tag=CCO34_11000 NZ_NPMD01000004.1 Protein Homology CDS 35539 35934 . - 0 ID=cds-WP_094965445.1;Parent=gene-CCO34_RS11005;Dbxref=GenBank:WP_094965445.1;Name=WP_094965445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787529.1;locus_tag=CCO34_RS11005;product=hypothetical protein;protein_id=WP_094965445.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 36129 36440 . - . ID=gene-CCO34_RS11010;Name=CCO34_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11010;old_locus_tag=CCO34_11005 NZ_NPMD01000004.1 Protein Homology CDS 36129 36440 . - 0 ID=cds-WP_094965446.1;Parent=gene-CCO34_RS11010;Dbxref=GenBank:WP_094965446.1;Name=WP_094965446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310784.1;locus_tag=CCO34_RS11010;product=hypothetical protein;protein_id=WP_094965446.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 36433 36687 . - . ID=gene-CCO34_RS11015;Name=CCO34_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11015;old_locus_tag=CCO34_11010 NZ_NPMD01000004.1 Protein Homology CDS 36433 36687 . - 0 ID=cds-WP_094965447.1;Parent=gene-CCO34_RS11015;Dbxref=GenBank:WP_094965447.1;Name=WP_094965447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001294161.1;locus_tag=CCO34_RS11015;product=hypothetical protein;protein_id=WP_094965447.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 36680 36961 . - . ID=gene-CCO34_RS11020;Name=CCO34_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11020;old_locus_tag=CCO34_11015 NZ_NPMD01000004.1 Protein Homology CDS 36680 36961 . - 0 ID=cds-WP_094965448.1;Parent=gene-CCO34_RS11020;Dbxref=GenBank:WP_094965448.1;Name=WP_094965448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018050.1;locus_tag=CCO34_RS11020;product=DUF4752 family protein;protein_id=WP_094965448.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 36958 37248 . - . ID=gene-CCO34_RS11025;Name=CCO34_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11025;old_locus_tag=CCO34_11020 NZ_NPMD01000004.1 Protein Homology CDS 36958 37248 . - 0 ID=cds-WP_021000200.1;Parent=gene-CCO34_RS11025;Dbxref=GenBank:WP_021000200.1;Name=WP_021000200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001223891.1;locus_tag=CCO34_RS11025;product=DUF4406 domain-containing protein;protein_id=WP_021000200.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 37245 37640 . - . ID=gene-CCO34_RS11030;Name=CCO34_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11030;old_locus_tag=CCO34_11025 NZ_NPMD01000004.1 Protein Homology CDS 37245 37640 . - 0 ID=cds-WP_080171289.1;Parent=gene-CCO34_RS11030;Dbxref=GenBank:WP_080171289.1;Name=WP_080171289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=CCO34_RS11030;product=DUF977 family protein;protein_id=WP_080171289.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 37671 38417 . - . ID=gene-CCO34_RS11035;Name=CCO34_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11035;old_locus_tag=CCO34_11030 NZ_NPMD01000004.1 Protein Homology CDS 37671 38417 . - 0 ID=cds-WP_094965449.1;Parent=gene-CCO34_RS11035;Dbxref=GenBank:WP_094965449.1;Name=WP_094965449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309972.1;locus_tag=CCO34_RS11035;product=ATP-binding protein;protein_id=WP_094965449.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 38424 39212 . - . ID=gene-CCO34_RS11040;Name=CCO34_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11040;old_locus_tag=CCO34_11035 NZ_NPMD01000004.1 Protein Homology CDS 38424 39212 . - 0 ID=cds-WP_094965450.1;Parent=gene-CCO34_RS11040;Dbxref=GenBank:WP_094965450.1;Name=WP_094965450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309971.1;locus_tag=CCO34_RS11040;product=hypothetical protein;protein_id=WP_094965450.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 39541 39954 . - . ID=gene-CCO34_RS11045;Name=CCO34_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11045;old_locus_tag=CCO34_11040 NZ_NPMD01000004.1 Protein Homology CDS 39541 39954 . - 0 ID=cds-WP_074177122.1;Parent=gene-CCO34_RS11045;Dbxref=GenBank:WP_074177122.1;Name=WP_074177122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695013.1;locus_tag=CCO34_RS11045;product=hypothetical protein;protein_id=WP_074177122.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 39974 40396 . - . ID=gene-CCO34_RS11050;Name=CCO34_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11050;old_locus_tag=CCO34_11045 NZ_NPMD01000004.1 Protein Homology CDS 39974 40396 . - 0 ID=cds-WP_031571023.1;Parent=gene-CCO34_RS11050;Dbxref=GenBank:WP_031571023.1;Name=WP_031571023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706799.1;locus_tag=CCO34_RS11050;product=toxin YdaT family protein;protein_id=WP_031571023.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 40380 40655 . - . ID=gene-CCO34_RS11055;Name=CCO34_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11055;old_locus_tag=CCO34_11050 NZ_NPMD01000004.1 Protein Homology CDS 40380 40655 . - 0 ID=cds-WP_063916787.1;Parent=gene-CCO34_RS11055;Dbxref=GenBank:WP_063916787.1;Name=WP_063916787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171139.1;locus_tag=CCO34_RS11055;product=transcriptional regulator;protein_id=WP_063916787.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 40759 41226 . + . ID=gene-CCO34_RS11060;Name=CCO34_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11060;old_locus_tag=CCO34_11055 NZ_NPMD01000004.1 Protein Homology CDS 40759 41226 . + 0 ID=cds-WP_094965451.1;Parent=gene-CCO34_RS11060;Dbxref=GenBank:WP_094965451.1;Name=WP_094965451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227859.1;locus_tag=CCO34_RS11060;product=helix-turn-helix domain-containing protein;protein_id=WP_094965451.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 41567 42088 . - . ID=gene-CCO34_RS11065;Name=CCO34_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11065;old_locus_tag=CCO34_11060 NZ_NPMD01000004.1 Protein Homology CDS 41567 42088 . - 0 ID=cds-WP_094965452.1;Parent=gene-CCO34_RS11065;Dbxref=GenBank:WP_094965452.1;Name=WP_094965452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004762.1;locus_tag=CCO34_RS11065;product=super-infection exclusion protein B;protein_id=WP_094965452.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 42526 42747 . + . ID=gene-CCO34_RS11075;Name=kilR;gbkey=Gene;gene=kilR;gene_biotype=protein_coding;locus_tag=CCO34_RS11075;old_locus_tag=CCO34_11070 NZ_NPMD01000004.1 Protein Homology CDS 42526 42747 . + 0 ID=cds-WP_000560226.1;Parent=gene-CCO34_RS11075;Dbxref=GenBank:WP_000560226.1;Name=WP_000560226.1;gbkey=CDS;gene=kilR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707273.1;locus_tag=CCO34_RS11075;product=killing protein KilR;protein_id=WP_000560226.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 42747 42917 . + . ID=gene-CCO34_RS11080;Name=CCO34_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11080;old_locus_tag=CCO34_11075 NZ_NPMD01000004.1 Protein Homology CDS 42747 42917 . + 0 ID=cds-WP_073998939.1;Parent=gene-CCO34_RS11080;Dbxref=GenBank:WP_073998939.1;Name=WP_073998939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588451.1;locus_tag=CCO34_RS11080;product=YdaE family protein;protein_id=WP_073998939.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 42992 43267 . + . ID=gene-CCO34_RS11085;Name=CCO34_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11085;old_locus_tag=CCO34_11080 NZ_NPMD01000004.1 Protein Homology CDS 42992 43267 . + 0 ID=cds-WP_058108185.1;Parent=gene-CCO34_RS11085;Dbxref=GenBank:WP_058108185.1;Name=WP_058108185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415867.1;locus_tag=CCO34_RS11085;product=hypothetical protein;protein_id=WP_058108185.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 43369 45996 . + . ID=gene-CCO34_RS11090;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=CCO34_RS11090;old_locus_tag=CCO34_11085 NZ_NPMD01000004.1 Protein Homology CDS 43369 45996 . + 0 ID=cds-WP_094965453.1;Parent=gene-CCO34_RS11090;Dbxref=GenBank:WP_094965453.1;Name=WP_094965453.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: protein motif:HMM:NF007259.0;locus_tag=CCO34_RS11090;product=exodeoxyribonuclease VIII;protein_id=WP_094965453.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 45989 46822 . + . ID=gene-CCO34_RS11095;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=CCO34_RS11095;old_locus_tag=CCO34_11090 NZ_NPMD01000004.1 Protein Homology CDS 45989 46822 . + 0 ID=cds-WP_094965454.1;Parent=gene-CCO34_RS11095;Dbxref=GenBank:WP_094965454.1;Name=WP_094965454.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415865.1;locus_tag=CCO34_RS11095;product=recombination protein RecT;protein_id=WP_094965454.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 46879 47073 . + . ID=gene-CCO34_RS11100;Name=ralR;gbkey=Gene;gene=ralR;gene_biotype=protein_coding;locus_tag=CCO34_RS11100;old_locus_tag=CCO34_11095 NZ_NPMD01000004.1 Protein Homology CDS 46879 47073 . + 0 ID=cds-WP_073998940.1;Parent=gene-CCO34_RS11100;Dbxref=GenBank:WP_073998940.1;Name=WP_073998940.1;gbkey=CDS;gene=ralR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415864.1;locus_tag=CCO34_RS11100;product=type I toxin-antitoxin system endodeoxyribonuclease toxin RalR;protein_id=WP_073998940.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 47066 47254 . + . ID=gene-CCO34_RS11105;Name=CCO34_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11105;old_locus_tag=CCO34_11100 NZ_NPMD01000004.1 Protein Homology CDS 47066 47254 . + 0 ID=cds-WP_058108251.1;Parent=gene-CCO34_RS11105;Dbxref=GenBank:WP_058108251.1;Name=WP_058108251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309958.1;locus_tag=CCO34_RS11105;product=DUF1187 family protein;protein_id=WP_058108251.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 47362 47634 . + . ID=gene-CCO34_RS11110;Name=CCO34_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11110;old_locus_tag=CCO34_11105 NZ_NPMD01000004.1 Protein Homology CDS 47362 47634 . + 0 ID=cds-WP_031615785.1;Parent=gene-CCO34_RS11110;Dbxref=GenBank:WP_031615785.1;Name=WP_031615785.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722423.1;locus_tag=CCO34_RS11110;product=excisionase;protein_id=WP_031615785.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 47609 48688 . + . ID=gene-CCO34_RS11115;Name=CCO34_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11115;old_locus_tag=CCO34_11110 NZ_NPMD01000004.1 Protein Homology CDS 47609 48688 . + 0 ID=cds-WP_094965455.1;Parent=gene-CCO34_RS11115;Dbxref=GenBank:WP_094965455.1;Name=WP_094965455.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=CCO34_RS11115;product=tyrosine-type recombinase/integrase;protein_id=WP_094965455.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 49059 49412 . - . ID=gene-CCO34_RS11125;Name=CCO34_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11125;old_locus_tag=CCO34_11120 NZ_NPMD01000004.1 Protein Homology CDS 49059 49412 . - 0 ID=cds-WP_000722368.1;Parent=gene-CCO34_RS11125;Dbxref=GenBank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=CCO34_RS11125;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 49429 50304 . - . ID=gene-CCO34_RS11130;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=CCO34_RS11130;old_locus_tag=CCO34_11125 NZ_NPMD01000004.1 Protein Homology CDS 49429 50304 . - 0 ID=cds-WP_000979689.1;Parent=gene-CCO34_RS11130;Dbxref=GenBank:WP_000979689.1;Name=WP_000979689.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=CCO34_RS11130;product=copper homeostasis membrane protein CopD;protein_id=WP_000979689.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 50305 50679 . - . ID=gene-CCO34_RS11135;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=CCO34_RS11135;old_locus_tag=CCO34_11130 NZ_NPMD01000004.1 Protein Homology CDS 50305 50679 . - 0 ID=cds-WP_000168392.1;Parent=gene-CCO34_RS11135;Dbxref=GenBank:WP_000168392.1;Name=WP_000168392.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=CCO34_RS11135;product=CopC domain-containing protein YobA;protein_id=WP_000168392.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 50817 51047 . + . ID=gene-CCO34_RS11140;Name=CCO34_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11140;old_locus_tag=CCO34_11135 NZ_NPMD01000004.1 Protein Homology CDS 50817 51047 . + 0 ID=cds-WP_000856224.1;Parent=gene-CCO34_RS11140;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=CCO34_RS11140;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 51155 51811 . + . ID=gene-CCO34_RS11145;Name=CCO34_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11145;old_locus_tag=CCO34_11140 NZ_NPMD01000004.1 Protein Homology CDS 51155 51811 . + 0 ID=cds-WP_000100257.1;Parent=gene-CCO34_RS11145;Dbxref=GenBank:WP_000100257.1;Name=WP_000100257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=CCO34_RS11145;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000100257.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 51835 52533 . + . ID=gene-CCO34_RS11150;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=CCO34_RS11150;old_locus_tag=CCO34_11145 NZ_NPMD01000004.1 Protein Homology CDS 51835 52533 . + 0 ID=cds-WP_000944282.1;Parent=gene-CCO34_RS11150;Dbxref=GenBank:WP_000944282.1;Name=WP_000944282.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=CCO34_RS11150;product=exodeoxyribonuclease X;protein_id=WP_000944282.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 52570 54621 . - . ID=gene-CCO34_RS11155;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=CCO34_RS11155;old_locus_tag=CCO34_11150 NZ_NPMD01000004.1 Protein Homology CDS 52570 54621 . - 0 ID=cds-WP_000936997.1;Parent=gene-CCO34_RS11155;Dbxref=GenBank:WP_000936997.1;Name=WP_000936997.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=CCO34_RS11155;product=oligopeptidase B;protein_id=WP_000936997.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 54835 55494 . - . ID=gene-CCO34_RS11160;Name=CCO34_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11160;old_locus_tag=CCO34_11155 NZ_NPMD01000004.1 Protein Homology CDS 54835 55494 . - 0 ID=cds-WP_000024706.1;Parent=gene-CCO34_RS11160;Dbxref=GenBank:WP_000024706.1;Name=WP_000024706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=CCO34_RS11160;product=tellurite resistance TerB family protein;protein_id=WP_000024706.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 55588 55941 . - . ID=gene-CCO34_RS11165;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=CCO34_RS11165;old_locus_tag=CCO34_11160 NZ_NPMD01000004.1 Protein Homology CDS 55588 55941 . - 0 ID=cds-WP_001042123.1;Parent=gene-CCO34_RS11165;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=CCO34_RS11165;product=protein YebF;protein_id=WP_001042123.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 56009 56299 . - . ID=gene-CCO34_RS11170;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=CCO34_RS11170;old_locus_tag=CCO34_11165 NZ_NPMD01000004.1 Protein Homology CDS 56009 56299 . - 0 ID=cds-WP_000257723.1;Parent=gene-CCO34_RS11170;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=CCO34_RS11170;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 56430 57608 . + . ID=gene-CCO34_RS11175;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=CCO34_RS11175;old_locus_tag=CCO34_11170 NZ_NPMD01000004.1 Protein Homology CDS 56430 57608 . + 0 ID=cds-WP_000173429.1;Parent=gene-CCO34_RS11175;Dbxref=GenBank:WP_000173429.1;Name=WP_000173429.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=CCO34_RS11175;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173429.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 57708 58349 . - . ID=gene-CCO34_RS11180;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=CCO34_RS11180;old_locus_tag=CCO34_11175 NZ_NPMD01000004.1 Protein Homology CDS 57708 58349 . - 0 ID=cds-WP_000800494.1;Parent=gene-CCO34_RS11180;Dbxref=GenBank:WP_000800494.1;Name=WP_000800494.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=CCO34_RS11180;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800494.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 58387 60198 . - . ID=gene-CCO34_RS11185;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=CCO34_RS11185;old_locus_tag=CCO34_11180 NZ_NPMD01000004.1 Protein Homology CDS 58387 60198 . - 0 ID=cds-WP_001069113.1;Parent=gene-CCO34_RS11185;Dbxref=GenBank:WP_001069113.1;Name=WP_001069113.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=CCO34_RS11185;product=phosphogluconate dehydratase;protein_id=WP_001069113.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 60433 61908 . - . ID=gene-CCO34_RS11190;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CCO34_RS11190;old_locus_tag=CCO34_11185 NZ_NPMD01000004.1 Protein Homology CDS 60433 61908 . - 0 ID=cds-WP_000301711.1;Parent=gene-CCO34_RS11190;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=CCO34_RS11190;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 62250 63119 . + . ID=gene-CCO34_RS11200;Name=CCO34_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11200;old_locus_tag=CCO34_11195 NZ_NPMD01000004.1 Protein Homology CDS 62250 63119 . + 0 ID=cds-WP_001056720.1;Parent=gene-CCO34_RS11200;Dbxref=GenBank:WP_001056720.1;Name=WP_001056720.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=CCO34_RS11200;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001056720.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 63243 64685 . + . ID=gene-CCO34_RS11205;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CCO34_RS11205;old_locus_tag=CCO34_11200 NZ_NPMD01000004.1 Protein Homology CDS 63243 64685 . + 0 ID=cds-WP_000091156.1;Parent=gene-CCO34_RS11205;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=CCO34_RS11205;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 64758 65729 . - . ID=gene-CCO34_RS11210;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=CCO34_RS11210;old_locus_tag=CCO34_11205 NZ_NPMD01000004.1 Protein Homology CDS 64758 65729 . - 0 ID=cds-WP_000448401.1;Parent=gene-CCO34_RS11210;Dbxref=GenBank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=CCO34_RS11210;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 65846 67165 . - . ID=gene-CCO34_RS11220;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=CCO34_RS11220;old_locus_tag=CCO34_11215 NZ_NPMD01000004.1 Protein Homology CDS 65846 67165 . - 0 ID=cds-WP_001184028.1;Parent=gene-CCO34_RS11220;Dbxref=GenBank:WP_001184028.1;Name=WP_001184028.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=CCO34_RS11220;product=murein DD-endopeptidase MepM;protein_id=WP_001184028.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 67181 68125 . - . ID=gene-CCO34_RS11225;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=CCO34_RS11225;old_locus_tag=CCO34_11220 NZ_NPMD01000004.1 Protein Homology CDS 67181 68125 . - 0 ID=cds-WP_000939597.1;Parent=gene-CCO34_RS11225;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=CCO34_RS11225;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 68204 68959 . + . ID=gene-CCO34_RS11230;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=CCO34_RS11230;old_locus_tag=CCO34_11225 NZ_NPMD01000004.1 Protein Homology CDS 68204 68959 . + 0 ID=cds-WP_000203023.1;Parent=gene-CCO34_RS11230;Dbxref=GenBank:WP_000203023.1;Name=WP_000203023.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=CCO34_RS11230;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203023.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 68956 69741 . + . ID=gene-CCO34_RS11235;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=CCO34_RS11235;old_locus_tag=CCO34_11230 NZ_NPMD01000004.1 Protein Homology CDS 68956 69741 . + 0 ID=cds-WP_000571508.1;Parent=gene-CCO34_RS11235;Dbxref=GenBank:WP_000571508.1;Name=WP_000571508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=CCO34_RS11235;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571508.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 69820 70830 . - . ID=gene-CCO34_RS11240;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CCO34_RS11240;old_locus_tag=CCO34_11235 NZ_NPMD01000004.1 Protein Homology CDS 69820 70830 . - 0 ID=cds-WP_000568508.1;Parent=gene-CCO34_RS11240;Dbxref=GenBank:WP_000568508.1;Name=WP_000568508.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=CCO34_RS11240;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568508.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 70839 71450 . - . ID=gene-CCO34_RS11245;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CCO34_RS11245;old_locus_tag=CCO34_11240 NZ_NPMD01000004.1 Protein Homology CDS 70839 71450 . - 0 ID=cds-WP_000580335.1;Parent=gene-CCO34_RS11245;Dbxref=GenBank:WP_000580335.1;Name=WP_000580335.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=CCO34_RS11245;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580335.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 71810 72502 . - . ID=gene-CCO34_RS11250;Name=CCO34_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11250;old_locus_tag=CCO34_11245 NZ_NPMD01000004.1 Protein Homology CDS 71810 72502 . - 0 ID=cds-WP_000227320.1;Parent=gene-CCO34_RS11250;Dbxref=GenBank:WP_000227320.1;Name=WP_000227320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=CCO34_RS11250;product=hypothetical protein;protein_id=WP_000227320.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 72711 73307 . + . ID=gene-CCO34_RS11255;Name=CCO34_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11255;old_locus_tag=CCO34_11250 NZ_NPMD01000004.1 Protein Homology CDS 72711 73307 . + 0 ID=cds-WP_000716747.1;Parent=gene-CCO34_RS11255;Dbxref=GenBank:WP_000716747.1;Name=WP_000716747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716751.1;locus_tag=CCO34_RS11255;product=YebB family permuted papain-like enzyme;protein_id=WP_000716747.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 73407 74903 . - . ID=gene-CCO34_RS11260;Name=CCO34_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11260;old_locus_tag=CCO34_11255 NZ_NPMD01000004.1 Protein Homology CDS 73407 74903 . - 0 ID=cds-WP_000974704.1;Parent=gene-CCO34_RS11260;Dbxref=GenBank:WP_000974704.1;Name=WP_000974704.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974705.1;locus_tag=CCO34_RS11260;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_000974704.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 74934 75455 . - . ID=gene-CCO34_RS11265;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=CCO34_RS11265;old_locus_tag=CCO34_11260 NZ_NPMD01000004.1 Protein Homology CDS 74934 75455 . - 0 ID=cds-WP_000022510.1;Parent=gene-CCO34_RS11265;Dbxref=GenBank:WP_000022510.1;Name=WP_000022510.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=CCO34_RS11265;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022510.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 75492 76232 . - . ID=gene-CCO34_RS11270;Name=CCO34_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11270;old_locus_tag=CCO34_11265 NZ_NPMD01000004.1 Protein Homology CDS 75492 76232 . - 0 ID=cds-WP_000907242.1;Parent=gene-CCO34_RS11270;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=CCO34_RS11270;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 76262 76714 . - . ID=gene-CCO34_RS11275;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=CCO34_RS11275;old_locus_tag=CCO34_11270 NZ_NPMD01000004.1 Protein Homology CDS 76262 76714 . - 0 ID=cds-WP_000653693.1;Parent=gene-CCO34_RS11275;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=CCO34_RS11275;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 76817 78589 . - . ID=gene-CCO34_RS11280;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CCO34_RS11280;old_locus_tag=CCO34_11275 NZ_NPMD01000004.1 Protein Homology CDS 76817 78589 . - 0 ID=cds-WP_001258633.1;Parent=gene-CCO34_RS11280;Dbxref=GenBank:WP_001258633.1;Name=WP_001258633.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=CCO34_RS11280;product=aspartate--tRNA ligase;protein_id=WP_001258633.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 78914 79480 . + . ID=gene-CCO34_RS11285;Name=CCO34_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11285;old_locus_tag=CCO34_11280 NZ_NPMD01000004.1 Protein Homology CDS 78914 79480 . + 0 ID=cds-WP_000916144.1;Parent=gene-CCO34_RS11285;Dbxref=GenBank:WP_000916144.1;Name=WP_000916144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=CCO34_RS11285;product=hydrolase;protein_id=WP_000916144.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 79477 80295 . + . ID=gene-CCO34_RS11290;Name=CCO34_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11290;old_locus_tag=CCO34_11285 NZ_NPMD01000004.1 Protein Homology CDS 79477 80295 . + 0 ID=cds-WP_000639234.1;Parent=gene-CCO34_RS11290;Dbxref=GenBank:WP_000639234.1;Name=WP_000639234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=CCO34_RS11290;product=DUF72 domain-containing protein;protein_id=WP_000639234.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 80348 80743 . + . ID=gene-CCO34_RS11295;Name=CCO34_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11295;old_locus_tag=CCO34_11290 NZ_NPMD01000004.1 Protein Homology CDS 80348 80743 . + 0 ID=cds-WP_000252975.1;Parent=gene-CCO34_RS11295;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=CCO34_RS11295;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 80784 81527 . + . ID=gene-CCO34_RS11300;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=CCO34_RS11300;old_locus_tag=CCO34_11295 NZ_NPMD01000004.1 Protein Homology CDS 80784 81527 . + 0 ID=cds-WP_000019613.1;Parent=gene-CCO34_RS11300;Dbxref=GenBank:WP_000019613.1;Name=WP_000019613.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=CCO34_RS11300;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019613.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 81524 82495 . + . ID=gene-CCO34_RS11305;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=CCO34_RS11305;old_locus_tag=CCO34_11300 NZ_NPMD01000004.1 Protein Homology CDS 81524 82495 . + 0 ID=cds-WP_000569042.1;Parent=gene-CCO34_RS11305;Dbxref=GenBank:WP_000569042.1;Name=WP_000569042.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=CCO34_RS11305;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000569042.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 82731 83477 . - . ID=gene-CCO34_RS11315;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=CCO34_RS11315;old_locus_tag=CCO34_11310 NZ_NPMD01000004.1 Protein Homology CDS 82731 83477 . - 0 ID=cds-WP_001185771.1;Parent=gene-CCO34_RS11315;Dbxref=GenBank:WP_001185771.1;Name=WP_001185771.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=CCO34_RS11315;product=copper homeostasis protein CutC;protein_id=WP_001185771.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 83497 84066 . - . ID=gene-CCO34_RS11320;Name=CCO34_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11320;old_locus_tag=CCO34_11315 NZ_NPMD01000004.1 Protein Homology CDS 83497 84066 . - 0 ID=cds-WP_000024797.1;Parent=gene-CCO34_RS11320;Dbxref=GenBank:WP_000024797.1;Name=WP_000024797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=CCO34_RS11320;product=VOC family protein;protein_id=WP_000024797.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 84303 86036 . + . ID=gene-CCO34_RS11325;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CCO34_RS11325;old_locus_tag=CCO34_11320 NZ_NPMD01000004.1 Protein Homology CDS 84303 86036 . + 0 ID=cds-WP_001025366.1;Parent=gene-CCO34_RS11325;Dbxref=GenBank:WP_001025366.1;Name=WP_001025366.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=CCO34_RS11325;product=arginine--tRNA ligase;protein_id=WP_001025366.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 86225 88081 . + . ID=gene-CCO34_RS11330;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO34_RS11330;old_locus_tag=CCO34_11325 NZ_NPMD01000004.1 Protein Homology CDS 86225 88081 . + 0 ID=cds-WP_000142854.1;Parent=gene-CCO34_RS11330;Dbxref=GenBank:WP_000142854.1;Name=WP_000142854.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142865.1;locus_tag=CCO34_RS11330;product=penicillin-binding protein 2;protein_id=WP_000142854.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 88150 89289 . - . ID=gene-CCO34_RS11335;Name=CCO34_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11335;old_locus_tag=CCO34_11330 NZ_NPMD01000004.1 Protein Homology CDS 88150 89289 . - 0 ID=cds-WP_000989908.1;Parent=gene-CCO34_RS11335;Dbxref=GenBank:WP_000989908.1;Name=WP_000989908.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=CCO34_RS11335;product=glycoside hydrolase family 88/105 protein;protein_id=WP_000989908.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 89526 89918 . - . ID=gene-CCO34_RS11340;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=CCO34_RS11340;old_locus_tag=CCO34_11335 NZ_NPMD01000004.1 Protein Homology CDS 89526 89918 . - 0 ID=cds-WP_001233619.1;Parent=gene-CCO34_RS11340;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=CCO34_RS11340;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 89918 91996 . - . ID=gene-CCO34_RS11345;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO34_RS11345;old_locus_tag=CCO34_11340 NZ_NPMD01000004.1 Protein Homology CDS 89918 91996 . - 0 ID=cds-WP_000002386.1;Parent=gene-CCO34_RS11345;Dbxref=GenBank:WP_000002386.1;Name=WP_000002386.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=CCO34_RS11345;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002386.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 91989 93140 . - . ID=gene-CCO34_RS11350;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=CCO34_RS11350;old_locus_tag=CCO34_11345 NZ_NPMD01000004.1 Protein Homology CDS 91989 93140 . - 0 ID=cds-WP_000797089.1;Parent=gene-CCO34_RS11350;Dbxref=GenBank:WP_000797089.1;Name=WP_000797089.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=CCO34_RS11350;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797089.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 93334 93978 . - . ID=gene-CCO34_RS11355;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=CCO34_RS11355;old_locus_tag=CCO34_11350 NZ_NPMD01000004.1 Protein Homology CDS 93334 93978 . - 0 ID=cds-WP_000983586.1;Parent=gene-CCO34_RS11355;Dbxref=GenBank:WP_000983586.1;Name=WP_000983586.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=CCO34_RS11355;product=protein phosphatase CheZ;protein_id=WP_000983586.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 93989 94378 . - . ID=gene-CCO34_RS11360;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=CCO34_RS11360;old_locus_tag=CCO34_11355 NZ_NPMD01000004.1 Protein Homology CDS 93989 94378 . - 0 ID=cds-WP_000763861.1;Parent=gene-CCO34_RS11360;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=CCO34_RS11360;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 94396 95445 . - . ID=gene-CCO34_RS11365;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=CCO34_RS11365;old_locus_tag=CCO34_11360 NZ_NPMD01000004.1 Protein Homology CDS 94396 95445 . - 0 ID=cds-WP_000036392.1;Parent=gene-CCO34_RS11365;Dbxref=GenBank:WP_000036392.1;Name=WP_000036392.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=CCO34_RS11365;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036392.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 95442 96308 . - . ID=gene-CCO34_RS11370;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=CCO34_RS11370;old_locus_tag=CCO34_11365 NZ_NPMD01000004.1 Protein Homology CDS 95442 96308 . - 0 ID=cds-WP_000204362.1;Parent=gene-CCO34_RS11370;Dbxref=GenBank:WP_000204362.1;Name=WP_000204362.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=CCO34_RS11370;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204362.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 96462 98123 . - . ID=gene-CCO34_RS11375;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=CCO34_RS11375;old_locus_tag=CCO34_11370 NZ_NPMD01000004.1 Protein Homology CDS 96462 98123 . - 0 ID=cds-WP_000483278.1;Parent=gene-CCO34_RS11375;Dbxref=GenBank:WP_000483278.1;Name=WP_000483278.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=CCO34_RS11375;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483278.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 98360 98863 . - . ID=gene-CCO34_RS11380;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=CCO34_RS11380;old_locus_tag=CCO34_11375 NZ_NPMD01000004.1 Protein Homology CDS 98360 98863 . - 0 ID=cds-WP_000147295.1;Parent=gene-CCO34_RS11380;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=CCO34_RS11380;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 98884 100899 . - . ID=gene-CCO34_RS11385;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=CCO34_RS11385;old_locus_tag=CCO34_11380 NZ_NPMD01000004.1 Protein Homology CDS 98884 100899 . - 0 ID=cds-WP_094965456.1;Parent=gene-CCO34_RS11385;Dbxref=GenBank:WP_094965456.1;Name=WP_094965456.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=CCO34_RS11385;product=chemotaxis protein CheA;protein_id=WP_094965456.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 100904 101833 . - . ID=gene-CCO34_RS11390;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=CCO34_RS11390;old_locus_tag=CCO34_11385 NZ_NPMD01000004.1 Protein Homology CDS 100904 101833 . - 0 ID=cds-WP_000795653.1;Parent=gene-CCO34_RS11390;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=CCO34_RS11390;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 101830 102717 . - . ID=gene-CCO34_RS11395;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=CCO34_RS11395;old_locus_tag=CCO34_11390 NZ_NPMD01000004.1 Protein Homology CDS 101830 102717 . - 0 ID=cds-WP_000906312.1;Parent=gene-CCO34_RS11395;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=CCO34_RS11395;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 102842 103426 . - . ID=gene-CCO34_RS11400;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=CCO34_RS11400;old_locus_tag=CCO34_11395 NZ_NPMD01000004.1 Protein Homology CDS 102842 103426 . - 0 ID=cds-WP_000605987.1;Parent=gene-CCO34_RS11400;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=CCO34_RS11400;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 103423 103764 . - . ID=gene-CCO34_RS11405;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=CCO34_RS11405;old_locus_tag=CCO34_11400 NZ_NPMD01000004.1 Protein Homology CDS 103423 103764 . - 0 ID=cds-WP_001518146.1;Parent=gene-CCO34_RS11405;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=CCO34_RS11405;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 104447 104563 . + . ID=gene-CCO34_RS11410;Name=CCO34_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11410;old_locus_tag=CCO34_11405 NZ_NPMD01000004.1 Protein Homology CDS 104447 104563 . + 0 ID=cds-WP_001617301.1;Parent=gene-CCO34_RS11410;Dbxref=GenBank:WP_001617301.1;Name=WP_001617301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=CCO34_RS11410;product=hypothetical protein;protein_id=WP_001617301.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 104560 104988 . + . ID=gene-CCO34_RS11415;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=CCO34_RS11415;old_locus_tag=CCO34_11410 NZ_NPMD01000004.1 Protein Homology CDS 104560 104988 . + 0 ID=cds-WP_000122606.1;Parent=gene-CCO34_RS11415;Dbxref=GenBank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=CCO34_RS11415;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 105006 106427 . - . ID=gene-CCO34_RS11420;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=CCO34_RS11420;old_locus_tag=CCO34_11415 NZ_NPMD01000004.1 Protein Homology CDS 105006 106427 . - 0 ID=cds-WP_000089042.1;Parent=gene-CCO34_RS11420;Dbxref=GenBank:WP_000089042.1;Name=WP_000089042.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=CCO34_RS11420;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089042.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 106402 107205 . - . ID=gene-CCO34_RS11425;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=CCO34_RS11425;old_locus_tag=CCO34_11420 NZ_NPMD01000004.1 Protein Homology CDS 106402 107205 . - 0 ID=cds-WP_000840114.1;Parent=gene-CCO34_RS11425;Dbxref=GenBank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=CCO34_RS11425;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11 NZ_NPMD01000004.1 RefSeq pseudogene 107428 107610 . - . ID=gene-CCO34_RS11430;Name=araH;end_range=107610,.;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=CCO34_RS11430;old_locus_tag=CCO34_11425;partial=true;pseudo=true NZ_NPMD01000004.1 Protein Homology CDS 107428 107610 . - 0 ID=cds-CCO34_RS11430;Parent=gene-CCO34_RS11430;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=107610,.;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=CCO34_RS11430;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 107722 108279 . - . ID=gene-CCO34_RS11435;Name=CCO34_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11435;old_locus_tag=CCO34_11430 NZ_NPMD01000004.1 Protein Homology CDS 107722 108279 . - 0 ID=cds-WP_000754800.1;Parent=gene-CCO34_RS11435;Dbxref=GenBank:WP_000754800.1;Name=WP_000754800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=CCO34_RS11435;product=DJ-1/PfpI family protein;protein_id=WP_000754800.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 108830 109333 . + . ID=gene-CCO34_RS11440;Name=CCO34_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11440;old_locus_tag=CCO34_11435 NZ_NPMD01000004.1 Protein Homology CDS 108830 109333 . + 0 ID=cds-WP_000741707.1;Parent=gene-CCO34_RS11440;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=CCO34_RS11440;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 109512 110150 . - . ID=gene-CCO34_RS11445;Name=CCO34_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11445;old_locus_tag=CCO34_11440 NZ_NPMD01000004.1 Protein Homology CDS 109512 110150 . - 0 ID=cds-WP_000684804.1;Parent=gene-CCO34_RS11445;Dbxref=GenBank:WP_000684804.1;Name=WP_000684804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=CCO34_RS11445;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 110406 110741 . + . ID=gene-CCO34_RS11450;Name=CCO34_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11450;old_locus_tag=CCO34_11445 NZ_NPMD01000004.1 Protein Homology CDS 110406 110741 . + 0 ID=cds-WP_000803229.1;Parent=gene-CCO34_RS11450;Dbxref=GenBank:WP_000803229.1;Name=WP_000803229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=CCO34_RS11450;product=YecR-like lipofamily protein;protein_id=WP_000803229.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 110981 111478 . + . ID=gene-CCO34_RS11455;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=CCO34_RS11455;old_locus_tag=CCO34_11450 NZ_NPMD01000004.1 Protein Homology CDS 110981 111478 . + 0 ID=cds-WP_000920619.1;Parent=gene-CCO34_RS11455;Dbxref=GenBank:WP_000920619.1;Name=WP_000920619.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=CCO34_RS11455;product=non-heme ferritin;protein_id=WP_000920619.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 111524 111763 . - . ID=gene-CCO34_RS11460;Name=CCO34_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11460;old_locus_tag=CCO34_11455 NZ_NPMD01000004.1 Protein Homology CDS 111524 111763 . - 0 ID=cds-WP_000377238.1;Parent=gene-CCO34_RS11460;Dbxref=GenBank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=CCO34_RS11460;product=YecH family metal-binding protein;protein_id=WP_000377238.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 111990 113201 . + . ID=gene-CCO34_RS11465;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=CCO34_RS11465;old_locus_tag=CCO34_11460 NZ_NPMD01000004.1 Protein Homology CDS 111990 113201 . + 0 ID=cds-WP_001562965.1;Parent=gene-CCO34_RS11465;Dbxref=GenBank:WP_001562965.1;Name=WP_001562965.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=CCO34_RS11465;product=tyrosine transporter TyrP;protein_id=WP_001562965.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 113276 113941 . - . ID=gene-CCO34_RS11470;Name=CCO34_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11470;old_locus_tag=CCO34_11465 NZ_NPMD01000004.1 Protein Homology CDS 113276 113941 . - 0 ID=cds-WP_000781526.1;Parent=gene-CCO34_RS11470;Dbxref=GenBank:WP_000781526.1;Name=WP_000781526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=CCO34_RS11470;product=YecA family protein;protein_id=WP_000781526.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 114180 114506 . - . ID=gene-CCO34_RS11475;Name=CCO34_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11475;old_locus_tag=CCO34_11470 NZ_NPMD01000004.1 Protein Homology CDS 114180 114506 . - 0 ID=cds-WP_000240832.1;Parent=gene-CCO34_RS11475;Dbxref=GenBank:WP_000240832.1;Name=WP_000240832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=CCO34_RS11475;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240832.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 114719 116158 . - . ID=gene-CCO34_RS11480;Name=CCO34_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11480;old_locus_tag=CCO34_11475 NZ_NPMD01000004.1 Protein Homology CDS 114719 116158 . - 0 ID=cds-WP_077905360.1;Parent=gene-CCO34_RS11480;Dbxref=GenBank:WP_077905360.1;Name=WP_077905360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=CCO34_RS11480;product=SH3 domain-containing C40 family peptidase;protein_id=WP_077905360.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 116372 116704 . - . ID=gene-CCO34_RS11485;Name=CCO34_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11485;old_locus_tag=CCO34_11480 NZ_NPMD01000004.1 Protein Homology CDS 116372 116704 . - 0 ID=cds-WP_001748518.1;Parent=gene-CCO34_RS11485;Dbxref=GenBank:WP_001748518.1;Name=WP_001748518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=CCO34_RS11485;product=hypothetical protein;protein_id=WP_001748518.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 116953 117039 . - . ID=gene-CCO34_RS11490;Name=CCO34_RS11490;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS11490;old_locus_tag=CCO34_11485 NZ_NPMD01000004.1 tRNAscan-SE tRNA 116953 117039 . - . ID=rna-CCO34_RS11490;Parent=gene-CCO34_RS11490;anticodon=(pos:complement(117003..117005));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11490;product=tRNA-Leu NZ_NPMD01000004.1 tRNAscan-SE exon 116953 117039 . - . ID=exon-CCO34_RS11490-1;Parent=rna-CCO34_RS11490;anticodon=(pos:complement(117003..117005));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11490;product=tRNA-Leu NZ_NPMD01000004.1 RefSeq gene 117051 117124 . - . ID=gene-CCO34_RS11495;Name=CCO34_RS11495;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS11495;old_locus_tag=CCO34_11490 NZ_NPMD01000004.1 tRNAscan-SE tRNA 117051 117124 . - . ID=rna-CCO34_RS11495;Parent=gene-CCO34_RS11495;anticodon=(pos:complement(117090..117092));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11495;product=tRNA-Cys NZ_NPMD01000004.1 tRNAscan-SE exon 117051 117124 . - . ID=exon-CCO34_RS11495-1;Parent=rna-CCO34_RS11495;anticodon=(pos:complement(117090..117092));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11495;product=tRNA-Cys NZ_NPMD01000004.1 RefSeq gene 117177 117252 . - . ID=gene-CCO34_RS11500;Name=CCO34_RS11500;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS11500;old_locus_tag=CCO34_11495 NZ_NPMD01000004.1 tRNAscan-SE tRNA 117177 117252 . - . ID=rna-CCO34_RS11500;Parent=gene-CCO34_RS11500;anticodon=(pos:complement(117217..117219));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11500;product=tRNA-Gly NZ_NPMD01000004.1 tRNAscan-SE exon 117177 117252 . - . ID=exon-CCO34_RS11500-1;Parent=rna-CCO34_RS11500;anticodon=(pos:complement(117217..117219));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11500;product=tRNA-Gly NZ_NPMD01000004.1 RefSeq gene 117404 117952 . - . ID=gene-CCO34_RS11505;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CCO34_RS11505;old_locus_tag=CCO34_11500 NZ_NPMD01000004.1 Protein Homology CDS 117404 117952 . - 0 ID=cds-WP_001160192.1;Parent=gene-CCO34_RS11505;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=CCO34_RS11505;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 118009 119841 . - . ID=gene-CCO34_RS11510;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CCO34_RS11510;old_locus_tag=CCO34_11505 NZ_NPMD01000004.1 Protein Homology CDS 118009 119841 . - 0 ID=cds-WP_001289475.1;Parent=gene-CCO34_RS11510;Dbxref=GenBank:WP_001289475.1;Name=WP_001289475.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=CCO34_RS11510;product=excinuclease ABC subunit UvrC;protein_id=WP_001289475.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 119838 120494 . - . ID=gene-CCO34_RS11515;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=CCO34_RS11515;old_locus_tag=CCO34_11510 NZ_NPMD01000004.1 Protein Homology CDS 119838 120494 . - 0 ID=cds-WP_000611323.1;Parent=gene-CCO34_RS11515;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=CCO34_RS11515;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 120806 120961 . + . ID=gene-CCO34_RS11520;Name=CCO34_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11520;old_locus_tag=CCO34_11515 NZ_NPMD01000004.1 Protein Homology CDS 120806 120961 . + 0 ID=cds-WP_000546188.1;Parent=gene-CCO34_RS11520;Dbxref=GenBank:WP_000546188.1;Name=WP_000546188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=CCO34_RS11520;product=hypothetical protein;protein_id=WP_000546188.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 120958 121182 . + . ID=gene-CCO34_RS11525;Name=CCO34_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11525;old_locus_tag=CCO34_11520 NZ_NPMD01000004.1 Protein Homology CDS 120958 121182 . + 0 ID=cds-WP_000106483.1;Parent=gene-CCO34_RS11525;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=CCO34_RS11525;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 121249 121971 . - . ID=gene-CCO34_RS11530;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=CCO34_RS11530;old_locus_tag=CCO34_11525 NZ_NPMD01000004.1 Protein Homology CDS 121249 121971 . - 0 ID=cds-WP_001157169.1;Parent=gene-CCO34_RS11530;Dbxref=GenBank:WP_001157169.1;Name=WP_001157169.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=CCO34_RS11530;product=transcriptional regulator SdiA;protein_id=WP_001157169.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 122203 122955 . - . ID=gene-CCO34_RS11535;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=CCO34_RS11535;old_locus_tag=CCO34_11530 NZ_NPMD01000004.1 Protein Homology CDS 122203 122955 . - 0 ID=cds-WP_001273033.1;Parent=gene-CCO34_RS11535;Dbxref=GenBank:WP_001273033.1;Name=WP_001273033.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=CCO34_RS11535;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273033.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 122952 123620 . - . ID=gene-CCO34_RS11540;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=CCO34_RS11540;old_locus_tag=CCO34_11535 NZ_NPMD01000004.1 Protein Homology CDS 122952 123620 . - 0 ID=cds-WP_001158234.1;Parent=gene-CCO34_RS11540;Dbxref=GenBank:WP_001158234.1;Name=WP_001158234.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=CCO34_RS11540;product=cystine ABC transporter permease;protein_id=WP_001158234.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 123641 124627 . - . ID=gene-CCO34_RS11545;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=CCO34_RS11545;old_locus_tag=CCO34_11540 NZ_NPMD01000004.1 Protein Homology CDS 123641 124627 . - 0 ID=cds-WP_001128188.1;Parent=gene-CCO34_RS11545;Dbxref=GenBank:WP_001128188.1;Name=WP_001128188.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=CCO34_RS11545;product=D-cysteine desulfhydrase;protein_id=WP_001128188.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 124781 125581 . - . ID=gene-CCO34_RS11550;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=CCO34_RS11550;old_locus_tag=CCO34_11545 NZ_NPMD01000004.1 Protein Homology CDS 124781 125581 . - 0 ID=cds-WP_000761628.1;Parent=gene-CCO34_RS11550;Dbxref=GenBank:WP_000761628.1;Name=WP_000761628.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=CCO34_RS11550;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761628.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 125728 126279 . - . ID=gene-CCO34_RS11555;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=CCO34_RS11555;old_locus_tag=CCO34_11550 NZ_NPMD01000004.1 Protein Homology CDS 125728 126279 . - 0 ID=cds-WP_000218080.1;Parent=gene-CCO34_RS11555;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=CCO34_RS11555;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 126338 127057 . - . ID=gene-CCO34_RS11560;Name=CCO34_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11560;old_locus_tag=CCO34_11555 NZ_NPMD01000004.1 Protein Homology CDS 126338 127057 . - 0 ID=cds-WP_001087453.1;Parent=gene-CCO34_RS11560;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=CCO34_RS11560;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 127254 128459 . - . ID=gene-CCO34_RS11565;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=CCO34_RS11565;old_locus_tag=CCO34_11560 NZ_NPMD01000004.1 Protein Homology CDS 127254 128459 . - 0 ID=cds-WP_000659224.1;Parent=gene-CCO34_RS11565;Dbxref=GenBank:WP_000659224.1;Name=WP_000659224.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=CCO34_RS11565;product=flagellin lysine-N-methylase;protein_id=WP_000659224.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 128538 130037 . - . ID=gene-CCO34_RS11570;Name=CCO34_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11570;old_locus_tag=CCO34_11565 NZ_NPMD01000004.1 Protein Homology CDS 128538 130037 . - 0 ID=cds-WP_000079802.1;Parent=gene-CCO34_RS11570;Dbxref=GenBank:WP_000079802.1;Name=WP_000079802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460912.1;locus_tag=CCO34_RS11570;product=FliC/FljB family flagellin;protein_id=WP_000079802.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 130294 131697 . + . ID=gene-CCO34_RS11575;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=CCO34_RS11575;old_locus_tag=CCO34_11570 NZ_NPMD01000004.1 Protein Homology CDS 130294 131697 . + 0 ID=cds-WP_000146806.1;Parent=gene-CCO34_RS11575;Dbxref=GenBank:WP_000146806.1;Name=WP_000146806.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=CCO34_RS11575;product=flagellar filament capping protein FliD;protein_id=WP_000146806.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 131712 132119 . + . ID=gene-CCO34_RS11580;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=CCO34_RS11580;old_locus_tag=CCO34_11575 NZ_NPMD01000004.1 Protein Homology CDS 131712 132119 . + 0 ID=cds-WP_000287764.1;Parent=gene-CCO34_RS11580;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=CCO34_RS11580;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 132119 132487 . + . ID=gene-CCO34_RS11585;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=CCO34_RS11585;old_locus_tag=CCO34_11580 NZ_NPMD01000004.1 Protein Homology CDS 132119 132487 . + 0 ID=cds-WP_000204899.1;Parent=gene-CCO34_RS11585;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=CCO34_RS11585;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 132559 134043 . + . ID=gene-CCO34_RS11590;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=CCO34_RS11590;old_locus_tag=CCO34_11585 NZ_NPMD01000004.1 Protein Homology CDS 132559 134043 . + 0 ID=cds-WP_000795479.1;Parent=gene-CCO34_RS11590;Dbxref=GenBank:WP_000795479.1;Name=WP_000795479.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=CCO34_RS11590;product=alpha-amylase;protein_id=WP_000795479.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 134083 134496 . - . ID=gene-CCO34_RS11595;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=CCO34_RS11595;old_locus_tag=CCO34_11590 NZ_NPMD01000004.1 Protein Homology CDS 134083 134496 . - 0 ID=cds-WP_000754694.1;Parent=gene-CCO34_RS11595;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=CCO34_RS11595;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 134682 135887 . + . ID=gene-CCO34_RS11600;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=CCO34_RS11600;old_locus_tag=CCO34_11595 NZ_NPMD01000004.1 Protein Homology CDS 134682 135887 . + 0 ID=cds-WP_001535233.1;Parent=gene-CCO34_RS11600;Dbxref=GenBank:WP_001535233.1;Name=WP_001535233.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=CCO34_RS11600;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001535233.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 135884 136117 . + . ID=gene-CCO34_RS11605;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=CCO34_RS11605;old_locus_tag=CCO34_11600 NZ_NPMD01000004.1 Protein Homology CDS 135884 136117 . + 0 ID=cds-WP_000790504.1;Parent=gene-CCO34_RS11605;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=CCO34_RS11605;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 136382 136768 . + . ID=gene-CCO34_RS11610;Name=CCO34_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11610;old_locus_tag=CCO34_11605 NZ_NPMD01000004.1 Protein Homology CDS 136382 136768 . + 0 ID=cds-WP_000639596.1;Parent=gene-CCO34_RS11610;Dbxref=GenBank:WP_000639596.1;Name=WP_000639596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=CCO34_RS11610;product=hypothetical protein;protein_id=WP_000639596.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 136888 137202 . - . ID=gene-CCO34_RS11615;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=CCO34_RS11615;old_locus_tag=CCO34_11610 NZ_NPMD01000004.1 Protein Homology CDS 136888 137202 . - 0 ID=cds-WP_000719037.1;Parent=gene-CCO34_RS11615;Dbxref=GenBank:WP_000719037.1;Name=WP_000719037.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=CCO34_RS11615;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719037.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 137419 139101 . + . ID=gene-CCO34_RS11620;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=CCO34_RS11620;old_locus_tag=CCO34_11615 NZ_NPMD01000004.1 Protein Homology CDS 137419 139101 . + 0 ID=cds-WP_001276834.1;Parent=gene-CCO34_RS11620;Dbxref=GenBank:WP_001276834.1;Name=WP_001276834.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=CCO34_RS11620;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_001276834.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 139094 140089 . + . ID=gene-CCO34_RS11625;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=CCO34_RS11625;old_locus_tag=CCO34_11620 NZ_NPMD01000004.1 Protein Homology CDS 139094 140089 . + 0 ID=cds-WP_000067735.1;Parent=gene-CCO34_RS11625;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=CCO34_RS11625;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 140082 140789 . + . ID=gene-CCO34_RS11630;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=CCO34_RS11630;old_locus_tag=CCO34_11625 NZ_NPMD01000004.1 Protein Homology CDS 140082 140789 . + 0 ID=cds-WP_000064158.1;Parent=gene-CCO34_RS11630;Dbxref=GenBank:WP_000064158.1;Name=WP_000064158.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=CCO34_RS11630;product=flagellar assembly protein FliH;protein_id=WP_000064158.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 140789 142159 . + . ID=gene-CCO34_RS11635;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=CCO34_RS11635;old_locus_tag=CCO34_11630 NZ_NPMD01000004.1 Protein Homology CDS 140789 142159 . + 0 ID=cds-WP_000213257.1;Parent=gene-CCO34_RS11635;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=CCO34_RS11635;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 142181 142624 . + . ID=gene-CCO34_RS11640;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=CCO34_RS11640;old_locus_tag=CCO34_11635 NZ_NPMD01000004.1 Protein Homology CDS 142181 142624 . + 0 ID=cds-WP_000046981.1;Parent=gene-CCO34_RS11640;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=CCO34_RS11640;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 142621 143844 . + . ID=gene-CCO34_RS11645;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=CCO34_RS11645;old_locus_tag=CCO34_11640 NZ_NPMD01000004.1 Protein Homology CDS 142621 143844 . + 0 ID=cds-WP_000631682.1;Parent=gene-CCO34_RS11645;Dbxref=GenBank:WP_000631682.1;Name=WP_000631682.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=CCO34_RS11645;product=flagellar hook length control protein FliK;protein_id=WP_000631682.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 143949 144416 . + . ID=gene-CCO34_RS11650;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=CCO34_RS11650;old_locus_tag=CCO34_11645 NZ_NPMD01000004.1 Protein Homology CDS 143949 144416 . + 0 ID=cds-WP_000132169.1;Parent=gene-CCO34_RS11650;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=CCO34_RS11650;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 144421 145425 . + . ID=gene-CCO34_RS11655;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=CCO34_RS11655;old_locus_tag=CCO34_11650 NZ_NPMD01000004.1 Protein Homology CDS 144421 145425 . + 0 ID=cds-WP_000502811.1;Parent=gene-CCO34_RS11655;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=CCO34_RS11655;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 145422 145835 . + . ID=gene-CCO34_RS11660;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=CCO34_RS11660;old_locus_tag=CCO34_11655 NZ_NPMD01000004.1 Protein Homology CDS 145422 145835 . + 0 ID=cds-WP_001282111.1;Parent=gene-CCO34_RS11660;Dbxref=GenBank:WP_001282111.1;Name=WP_001282111.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=CCO34_RS11660;product=flagellar motor switch protein FliN;protein_id=WP_001282111.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 145835 146212 . + . ID=gene-CCO34_RS11665;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=CCO34_RS11665;old_locus_tag=CCO34_11660 NZ_NPMD01000004.1 Protein Homology CDS 145835 146212 . + 0 ID=cds-WP_000978276.1;Parent=gene-CCO34_RS11665;Dbxref=GenBank:WP_000978276.1;Name=WP_000978276.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=CCO34_RS11665;product=flagellar biosynthetic protein FliO;protein_id=WP_000978276.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 146212 146949 . + . ID=gene-CCO34_RS11670;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=CCO34_RS11670;old_locus_tag=CCO34_11665 NZ_NPMD01000004.1 Protein Homology CDS 146212 146949 . + 0 ID=cds-WP_001253414.1;Parent=gene-CCO34_RS11670;Dbxref=GenBank:WP_001253414.1;Name=WP_001253414.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=CCO34_RS11670;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253414.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 146959 147228 . + . ID=gene-CCO34_RS11675;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=CCO34_RS11675;old_locus_tag=CCO34_11670 NZ_NPMD01000004.1 Protein Homology CDS 146959 147228 . + 0 ID=cds-WP_000187354.1;Parent=gene-CCO34_RS11675;Dbxref=GenBank:WP_000187354.1;Name=WP_000187354.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=CCO34_RS11675;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187354.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 147237 148031 . + . ID=gene-CCO34_RS11680;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=CCO34_RS11680;old_locus_tag=CCO34_11675 NZ_NPMD01000004.1 Protein Homology CDS 147237 148031 . + 0 ID=cds-WP_000616953.1;Parent=gene-CCO34_RS11680;Dbxref=GenBank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=CCO34_RS11680;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 148313 148936 . + . ID=gene-CCO34_RS11685;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=CCO34_RS11685;old_locus_tag=CCO34_11680 NZ_NPMD01000004.1 Protein Homology CDS 148313 148936 . + 0 ID=cds-WP_000103971.1;Parent=gene-CCO34_RS11685;Dbxref=GenBank:WP_000103971.1;Name=WP_000103971.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=CCO34_RS11685;product=transcriptional regulator RcsA;protein_id=WP_000103971.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 148975 149169 . - . ID=gene-CCO34_RS11690;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=CCO34_RS11690;old_locus_tag=CCO34_11685 NZ_NPMD01000004.1 Protein Homology CDS 148975 149169 . - 0 ID=cds-WP_000867218.1;Parent=gene-CCO34_RS11690;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=CCO34_RS11690;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 149298 149525 . + . ID=gene-CCO34_RS11695;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=CCO34_RS11695;old_locus_tag=CCO34_11690 NZ_NPMD01000004.1 Protein Homology CDS 149298 149525 . + 0 ID=cds-WP_000844798.1;Parent=gene-CCO34_RS11695;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=CCO34_RS11695;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 149835 150650 . + . ID=gene-CCO34_RS11700;Name=CCO34_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11700;old_locus_tag=CCO34_11695 NZ_NPMD01000004.1 Protein Homology CDS 149835 150650 . + 0 ID=cds-WP_000948794.1;Parent=gene-CCO34_RS11700;Dbxref=GenBank:WP_000948794.1;Name=WP_000948794.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=CCO34_RS11700;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948794.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 150629 152341 . - . ID=gene-CCO34_RS11705;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=CCO34_RS11705;old_locus_tag=CCO34_11700 NZ_NPMD01000004.1 Protein Homology CDS 150629 152341 . - 0 ID=cds-WP_001119820.1;Parent=gene-CCO34_RS11705;Dbxref=GenBank:WP_001119820.1;Name=WP_001119820.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=CCO34_RS11705;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001119820.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 152506 152691 . - . ID=gene-CCO34_RS11710;Name=CCO34_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11710;old_locus_tag=CCO34_11705 NZ_NPMD01000004.1 Protein Homology CDS 152506 152691 . - 0 ID=cds-WP_000232161.1;Parent=gene-CCO34_RS11710;Dbxref=GenBank:WP_000232161.1;Name=WP_000232161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=CCO34_RS11710;product=YodC family protein;protein_id=WP_000232161.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 152768 153685 . - . ID=gene-CCO34_RS11715;Name=CCO34_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11715;old_locus_tag=CCO34_11710 NZ_NPMD01000004.1 Protein Homology CDS 152768 153685 . - 0 ID=cds-WP_085920526.1;Parent=gene-CCO34_RS11715;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=CCO34_RS11715;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 153855 154775 . + . ID=gene-CCO34_RS11720;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=CCO34_RS11720;old_locus_tag=CCO34_11715 NZ_NPMD01000004.1 Protein Homology CDS 153855 154775 . + 0 ID=cds-WP_001212261.1;Parent=gene-CCO34_RS11720;Dbxref=GenBank:WP_001212261.1;Name=WP_001212261.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=CCO34_RS11720;product=drug/metabolite exporter YedA;protein_id=WP_001212261.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 154764 155234 . - . ID=gene-CCO34_RS11725;Name=CCO34_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11725;old_locus_tag=CCO34_11720 NZ_NPMD01000004.1 Protein Homology CDS 154764 155234 . - 0 ID=cds-WP_000785978.1;Parent=gene-CCO34_RS11725;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=CCO34_RS11725;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 155215 156645 . - . ID=gene-CCO34_RS11730;Name=CCO34_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11730;old_locus_tag=CCO34_11725 NZ_NPMD01000004.1 Protein Homology CDS 155215 156645 . - 0 ID=cds-WP_001157317.1;Parent=gene-CCO34_RS11730;Dbxref=GenBank:WP_001157317.1;Name=WP_001157317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=CCO34_RS11730;product=DNA cytosine methyltransferase;protein_id=WP_001157317.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 156719 157414 . - . ID=gene-CCO34_RS11735;Name=CCO34_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11735;old_locus_tag=CCO34_11730 NZ_NPMD01000004.1 Protein Homology CDS 156719 157414 . - 0 ID=cds-WP_000377053.1;Parent=gene-CCO34_RS11735;Dbxref=GenBank:WP_000377053.1;Name=WP_000377053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=CCO34_RS11735;product=phosphohydrolase;protein_id=WP_000377053.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 157494 157805 . - . ID=gene-CCO34_RS11740;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=CCO34_RS11740;old_locus_tag=CCO34_11735 NZ_NPMD01000004.1 Protein Homology CDS 157494 157805 . - 0 ID=cds-WP_000107435.1;Parent=gene-CCO34_RS11740;Dbxref=GenBank:WP_000107435.1;Name=WP_000107435.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=CCO34_RS11740;product=cell division protein DrpB;protein_id=WP_000107435.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 158455 159651 . + . ID=gene-CCO34_RS11745;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=CCO34_RS11745;old_locus_tag=CCO34_11740 NZ_NPMD01000004.1 Protein Homology CDS 158455 159651 . + 0 ID=cds-WP_001080662.1;Parent=gene-CCO34_RS11745;Dbxref=GenBank:WP_001080662.1;Name=WP_001080662.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=CCO34_RS11745;product=porin OmpS1;protein_id=WP_001080662.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 159912 160100 . - . ID=gene-CCO34_RS11750;Name=CCO34_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11750;old_locus_tag=CCO34_11745 NZ_NPMD01000004.1 Protein Homology CDS 159912 160100 . - 0 ID=cds-WP_024131109.1;Parent=gene-CCO34_RS11750;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=CCO34_RS11750;product=hypothetical protein;protein_id=WP_024131109.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 160111 160323 . - . ID=gene-CCO34_RS11755;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO34_RS11755;old_locus_tag=CCO34_11750 NZ_NPMD01000004.1 Protein Homology CDS 160111 160323 . - 0 ID=cds-WP_000208509.1;Parent=gene-CCO34_RS11755;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=CCO34_RS11755;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 160778 162046 . - . ID=gene-CCO34_RS11760;Name=CCO34_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11760;old_locus_tag=CCO34_11755 NZ_NPMD01000004.1 Protein Homology CDS 160778 162046 . - 0 ID=cds-WP_000457665.1;Parent=gene-CCO34_RS11760;Dbxref=GenBank:WP_000457665.1;Name=WP_000457665.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO34_RS11760;product=Y-family DNA polymerase;protein_id=WP_000457665.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 162049 162468 . - . ID=gene-CCO34_RS11765;Name=CCO34_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11765;old_locus_tag=CCO34_11760 NZ_NPMD01000004.1 Protein Homology CDS 162049 162468 . - 0 ID=cds-WP_000394197.1;Parent=gene-CCO34_RS11765;Dbxref=GenBank:WP_000394197.1;Name=WP_000394197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=CCO34_RS11765;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000394197.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 163059 163148 . - . ID=gene-CCO34_RS11780;Name=CCO34_RS11780;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS11780;old_locus_tag=CCO34_11775 NZ_NPMD01000004.1 tRNAscan-SE tRNA 163059 163148 . - . ID=rna-CCO34_RS11780;Parent=gene-CCO34_RS11780;anticodon=(pos:complement(163112..163114));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11780;product=tRNA-Ser NZ_NPMD01000004.1 tRNAscan-SE exon 163059 163148 . - . ID=exon-CCO34_RS11780-1;Parent=rna-CCO34_RS11780;anticodon=(pos:complement(163112..163114));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11780;product=tRNA-Ser NZ_NPMD01000004.1 RefSeq gene 163237 164034 . + . ID=gene-CCO34_RS11785;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=CCO34_RS11785;old_locus_tag=CCO34_11780 NZ_NPMD01000004.1 Protein Homology CDS 163237 164034 . + 0 ID=cds-WP_000598920.1;Parent=gene-CCO34_RS11785;Dbxref=GenBank:WP_000598920.1;Name=WP_000598920.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=CCO34_RS11785;product=DgsA anti-repressor MtfA;protein_id=WP_000598920.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 164135 164210 . + . ID=gene-CCO34_RS11790;Name=CCO34_RS11790;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS11790;old_locus_tag=CCO34_11785 NZ_NPMD01000004.1 tRNAscan-SE tRNA 164135 164210 . + . ID=rna-CCO34_RS11790;Parent=gene-CCO34_RS11790;anticodon=(pos:164168..164170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11790;product=tRNA-Asn NZ_NPMD01000004.1 tRNAscan-SE exon 164135 164210 . + . ID=exon-CCO34_RS11790-1;Parent=rna-CCO34_RS11790;anticodon=(pos:164168..164170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11790;product=tRNA-Asn NZ_NPMD01000004.1 RefSeq pseudogene 164378 164683 . + . ID=gene-CCO34_RS11795;Name=CCO34_RS11795;end_range=164683,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS11795;old_locus_tag=CCO34_11790;partial=true;pseudo=true NZ_NPMD01000004.1 Protein Homology CDS 164378 164683 . + 0 ID=cds-CCO34_RS11795;Parent=gene-CCO34_RS11795;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=164683,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=CCO34_RS11795;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 165105 165180 . + . ID=gene-CCO34_RS11800;Name=CCO34_RS11800;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS11800;old_locus_tag=CCO34_11795 NZ_NPMD01000004.1 tRNAscan-SE tRNA 165105 165180 . + . ID=rna-CCO34_RS11800;Parent=gene-CCO34_RS11800;anticodon=(pos:165138..165140);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11800;product=tRNA-Asn NZ_NPMD01000004.1 tRNAscan-SE exon 165105 165180 . + . ID=exon-CCO34_RS11800-1;Parent=rna-CCO34_RS11800;anticodon=(pos:165138..165140);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11800;product=tRNA-Asn NZ_NPMD01000004.1 RefSeq gene 165344 165868 . + . ID=gene-CCO34_RS11805;Name=CCO34_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11805;old_locus_tag=CCO34_11800 NZ_NPMD01000004.1 Protein Homology CDS 165344 165868 . + 0 ID=cds-WP_086813674.1;Parent=gene-CCO34_RS11805;Dbxref=GenBank:WP_086813674.1;Name=WP_086813674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=CCO34_RS11805;product=peptidase;protein_id=WP_086813674.1;transl_table=11 NZ_NPMD01000004.1 RefSeq pseudogene 166343 166810 . + . ID=gene-CCO34_RS11815;Name=CCO34_RS11815;end_range=166810,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS11815;old_locus_tag=CCO34_11810;partial=true;pseudo=true NZ_NPMD01000004.1 Protein Homology CDS 166343 166810 . + 0 ID=cds-CCO34_RS11815;Parent=gene-CCO34_RS11815;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=166810,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=CCO34_RS11815;partial=true;product=phage integrase N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_NPMD01000004.1 RefSeq pseudogene 166896 167174 . + . ID=gene-CCO34_RS11820;Name=CCO34_RS11820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS11820;old_locus_tag=CCO34_11815;partial=true;pseudo=true;start_range=.,166896 NZ_NPMD01000004.1 Protein Homology CDS 166896 167174 . + 0 ID=cds-CCO34_RS11820;Parent=gene-CCO34_RS11820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=CCO34_RS11820;partial=true;product=transposase;pseudo=true;start_range=.,166896;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 167858 169552 . + . ID=gene-CCO34_RS11825;Name=CCO34_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11825;old_locus_tag=CCO34_11820 NZ_NPMD01000004.1 Protein Homology CDS 167858 169552 . + 0 ID=cds-WP_077906045.1;Parent=gene-CCO34_RS11825;Dbxref=GenBank:WP_077906045.1;Name=WP_077906045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=CCO34_RS11825;product=SEL1-like repeat protein;protein_id=WP_077906045.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 169609 171339 . + . ID=gene-CCO34_RS11830;Name=CCO34_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11830;old_locus_tag=CCO34_11825 NZ_NPMD01000004.1 Protein Homology CDS 169609 171339 . + 0 ID=cds-WP_080180947.1;Parent=gene-CCO34_RS11830;Dbxref=GenBank:WP_080180947.1;Name=WP_080180947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=CCO34_RS11830;product=hypothetical protein;protein_id=WP_080180947.1;transl_table=11 NZ_NPMD01000004.1 RefSeq pseudogene 171397 171501 . - . ID=gene-CCO34_RS11835;Name=CCO34_RS11835;end_range=171501,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS11835;old_locus_tag=CCO34_11830;partial=true;pseudo=true NZ_NPMD01000004.1 Protein Homology CDS 171397 171501 . - 0 ID=cds-CCO34_RS11835;Parent=gene-CCO34_RS11835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=171501,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=CCO34_RS11835;partial=true;product=DUF520 family protein;pseudo=true;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 171549 171722 . + . ID=gene-CCO34_RS25555;Name=CCO34_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25555 NZ_NPMD01000004.1 Protein Homology CDS 171549 171722 . + 0 ID=cds-WP_000957535.1;Parent=gene-CCO34_RS25555;Dbxref=GenBank:WP_000957535.1;Name=WP_000957535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=CCO34_RS25555;product=hypothetical protein;protein_id=WP_000957535.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 172244 173698 . - . ID=gene-CCO34_RS11845;Name=CCO34_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11845;old_locus_tag=CCO34_11840 NZ_NPMD01000004.1 Protein Homology CDS 172244 173698 . - 0 ID=cds-WP_000428197.1;Parent=gene-CCO34_RS11845;Dbxref=GenBank:WP_000428197.1;Name=WP_000428197.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=CCO34_RS11845;product=AMP nucleosidase;protein_id=WP_000428197.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 174352 174427 . - . ID=gene-CCO34_RS11855;Name=CCO34_RS11855;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS11855;old_locus_tag=CCO34_11850 NZ_NPMD01000004.1 tRNAscan-SE tRNA 174352 174427 . - . ID=rna-CCO34_RS11855;Parent=gene-CCO34_RS11855;anticodon=(pos:complement(174392..174394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11855;product=tRNA-Asn NZ_NPMD01000004.1 tRNAscan-SE exon 174352 174427 . - . ID=exon-CCO34_RS11855-1;Parent=rna-CCO34_RS11855;anticodon=(pos:complement(174392..174394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11855;product=tRNA-Asn NZ_NPMD01000004.1 RefSeq gene 174568 176025 . - . ID=gene-CCO34_RS11860;Name=CCO34_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11860;old_locus_tag=CCO34_11855 NZ_NPMD01000004.1 Protein Homology CDS 174568 176025 . - 0 ID=cds-WP_001538409.1;Parent=gene-CCO34_RS11860;Dbxref=GenBank:WP_001538409.1;Name=WP_001538409.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=CCO34_RS11860;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_001538409.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 176185 176260 . + . ID=gene-CCO34_RS11865;Name=CCO34_RS11865;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS11865;old_locus_tag=CCO34_11860 NZ_NPMD01000004.1 tRNAscan-SE tRNA 176185 176260 . + . ID=rna-CCO34_RS11865;Parent=gene-CCO34_RS11865;anticodon=(pos:176218..176220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11865;product=tRNA-Asn NZ_NPMD01000004.1 tRNAscan-SE exon 176185 176260 . + . ID=exon-CCO34_RS11865-1;Parent=rna-CCO34_RS11865;anticodon=(pos:176218..176220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS11865;product=tRNA-Asn NZ_NPMD01000004.1 RefSeq gene 176487 177416 . - . ID=gene-CCO34_RS11870;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=CCO34_RS11870;old_locus_tag=CCO34_11865 NZ_NPMD01000004.1 Protein Homology CDS 176487 177416 . - 0 ID=cds-WP_001252816.1;Parent=gene-CCO34_RS11870;Dbxref=GenBank:WP_001252816.1;Name=WP_001252816.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=CCO34_RS11870;product=L%2CD-transpeptidase;protein_id=WP_001252816.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 177494 178564 . - . ID=gene-CCO34_RS11875;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=CCO34_RS11875;old_locus_tag=CCO34_11870 NZ_NPMD01000004.1 Protein Homology CDS 177494 178564 . - 0 ID=cds-WP_001193983.1;Parent=gene-CCO34_RS11875;Dbxref=GenBank:WP_001193983.1;Name=WP_001193983.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=CCO34_RS11875;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193983.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 178591 179334 . - . ID=gene-CCO34_RS11880;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=CCO34_RS11880;old_locus_tag=CCO34_11875 NZ_NPMD01000004.1 Protein Homology CDS 178591 179334 . - 0 ID=cds-WP_000039997.1;Parent=gene-CCO34_RS11880;Dbxref=GenBank:WP_000039997.1;Name=WP_000039997.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=CCO34_RS11880;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_000039997.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 179331 179876 . - . ID=gene-CCO34_RS11885;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=CCO34_RS11885;old_locus_tag=CCO34_11880 NZ_NPMD01000004.1 Protein Homology CDS 179331 179876 . - 0 ID=cds-WP_000973145.1;Parent=gene-CCO34_RS11885;Dbxref=GenBank:WP_000973145.1;Name=WP_000973145.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=CCO34_RS11885;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973145.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 179873 181393 . - . ID=gene-CCO34_RS11890;Name=CCO34_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11890;old_locus_tag=CCO34_11885 NZ_NPMD01000004.1 Protein Homology CDS 179873 181393 . - 0 ID=cds-WP_000189662.1;Parent=gene-CCO34_RS11890;Dbxref=GenBank:WP_000189662.1;Name=WP_000189662.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=CCO34_RS11890;product=cobyric acid synthase;protein_id=WP_000189662.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 181390 182205 . - . ID=gene-CCO34_RS11895;Name=CCO34_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11895;old_locus_tag=CCO34_11890 NZ_NPMD01000004.1 Protein Homology CDS 181390 182205 . - 0 ID=cds-WP_000881551.1;Parent=gene-CCO34_RS11895;Dbxref=GenBank:WP_000881551.1;Name=WP_000881551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=CCO34_RS11895;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881551.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 182214 182891 . - . ID=gene-CCO34_RS11900;Name=CCO34_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11900;old_locus_tag=CCO34_11895 NZ_NPMD01000004.1 Protein Homology CDS 182214 182891 . - 0 ID=cds-WP_000147132.1;Parent=gene-CCO34_RS11900;Dbxref=GenBank:WP_000147132.1;Name=WP_000147132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=CCO34_RS11900;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_000147132.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 182878 183159 . - . ID=gene-CCO34_RS11905;Name=CCO34_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11905;old_locus_tag=CCO34_11900 NZ_NPMD01000004.1 Protein Homology CDS 182878 183159 . - 0 ID=cds-WP_000753212.1;Parent=gene-CCO34_RS11905;Dbxref=GenBank:WP_000753212.1;Name=WP_000753212.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=CCO34_RS11905;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753212.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 183161 183898 . - . ID=gene-CCO34_RS11910;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=CCO34_RS11910;old_locus_tag=CCO34_11905 NZ_NPMD01000004.1 Protein Homology CDS 183161 183898 . - 0 ID=cds-WP_000764336.1;Parent=gene-CCO34_RS11910;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=CCO34_RS11910;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 183895 184608 . - . ID=gene-CCO34_RS11915;Name=CCO34_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11915;old_locus_tag=CCO34_11910 NZ_NPMD01000004.1 Protein Homology CDS 183895 184608 . - 0 ID=cds-WP_001013552.1;Parent=gene-CCO34_RS11915;Dbxref=GenBank:WP_001013552.1;Name=WP_001013552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=CCO34_RS11915;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013552.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 184605 185399 . - . ID=gene-CCO34_RS11920;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=CCO34_RS11920;old_locus_tag=CCO34_11915 NZ_NPMD01000004.1 Protein Homology CDS 184605 185399 . - 0 ID=cds-WP_000709784.1;Parent=gene-CCO34_RS11920;Dbxref=GenBank:WP_000709784.1;Name=WP_000709784.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=CCO34_RS11920;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709784.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 185402 186193 . - . ID=gene-CCO34_RS11925;Name=CCO34_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11925;old_locus_tag=CCO34_11920 NZ_NPMD01000004.1 Protein Homology CDS 185402 186193 . - 0 ID=cds-WP_001001983.1;Parent=gene-CCO34_RS11925;Dbxref=GenBank:WP_001001983.1;Name=WP_001001983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=CCO34_RS11925;product=cobalt-precorrin-6A reductase;protein_id=WP_001001983.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 186190 186915 . - . ID=gene-CCO34_RS11930;Name=CCO34_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11930;old_locus_tag=CCO34_11925 NZ_NPMD01000004.1 Protein Homology CDS 186190 186915 . - 0 ID=cds-WP_000953637.1;Parent=gene-CCO34_RS11930;Dbxref=GenBank:WP_000953637.1;Name=WP_000953637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=CCO34_RS11930;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953637.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 186915 187970 . - . ID=gene-CCO34_RS11935;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=CCO34_RS11935;old_locus_tag=CCO34_11930 NZ_NPMD01000004.1 Protein Homology CDS 186915 187970 . - 0 ID=cds-WP_001098911.1;Parent=gene-CCO34_RS11935;Dbxref=GenBank:WP_001098911.1;Name=WP_001098911.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=CCO34_RS11935;product=cobalt-precorrin 5A hydrolase;protein_id=WP_001098911.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 187951 188724 . - . ID=gene-CCO34_RS11940;Name=CCO34_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11940;old_locus_tag=CCO34_11935 NZ_NPMD01000004.1 Protein Homology CDS 187951 188724 . - 0 ID=cds-WP_000004872.1;Parent=gene-CCO34_RS11940;Dbxref=GenBank:WP_000004872.1;Name=WP_000004872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=CCO34_RS11940;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_000004872.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 188708 189286 . - . ID=gene-CCO34_RS11945;Name=CCO34_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11945;old_locus_tag=CCO34_11940 NZ_NPMD01000004.1 Protein Homology CDS 188708 189286 . - 0 ID=cds-WP_000650985.1;Parent=gene-CCO34_RS11945;Dbxref=GenBank:WP_000650985.1;Name=WP_000650985.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=CCO34_RS11945;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000650985.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 189276 189881 . - . ID=gene-CCO34_RS11950;Name=CCO34_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11950;old_locus_tag=CCO34_11945 NZ_NPMD01000004.1 Protein Homology CDS 189276 189881 . - 0 ID=cds-WP_000958831.1;Parent=gene-CCO34_RS11950;Dbxref=GenBank:WP_000958831.1;Name=WP_000958831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=CCO34_RS11950;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958831.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 189875 191014 . - . ID=gene-CCO34_RS11955;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=CCO34_RS11955;old_locus_tag=CCO34_11950 NZ_NPMD01000004.1 Protein Homology CDS 189875 191014 . - 0 ID=cds-WP_001292908.1;Parent=gene-CCO34_RS11955;Dbxref=GenBank:WP_001292908.1;Name=WP_001292908.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=CCO34_RS11955;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_001292908.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 191014 191646 . - . ID=gene-CCO34_RS11960;Name=CCO34_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11960;old_locus_tag=CCO34_11955 NZ_NPMD01000004.1 Protein Homology CDS 191014 191646 . - 0 ID=cds-WP_000558986.1;Parent=gene-CCO34_RS11960;Dbxref=GenBank:WP_000558986.1;Name=WP_000558986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=CCO34_RS11960;product=cobalt-precorrin-8 methylmutase;protein_id=WP_000558986.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 191657 192616 . - . ID=gene-CCO34_RS11965;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=CCO34_RS11965;old_locus_tag=CCO34_11960 NZ_NPMD01000004.1 Protein Homology CDS 191657 192616 . - 0 ID=cds-WP_000153656.1;Parent=gene-CCO34_RS11965;Dbxref=GenBank:WP_000153656.1;Name=WP_000153656.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=CCO34_RS11965;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153656.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 192613 193992 . - . ID=gene-CCO34_RS11970;Name=CCO34_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS11970;old_locus_tag=CCO34_11965 NZ_NPMD01000004.1 Protein Homology CDS 192613 193992 . - 0 ID=cds-WP_000741258.1;Parent=gene-CCO34_RS11970;Dbxref=GenBank:WP_000741258.1;Name=WP_000741258.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=CCO34_RS11970;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_000741258.1;transl_table=11 NZ_NPMD01000004.1 cmsearch riboswitch 194090 194264 . - . ID=id-NZ_NPMD01000004.1:194090..194264;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMD01000004.1 RefSeq gene 194590 195501 . - . ID=gene-CCO34_RS11975;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=CCO34_RS11975;old_locus_tag=CCO34_11970 NZ_NPMD01000004.1 Protein Homology CDS 194590 195501 . - 0 ID=cds-WP_000622326.1;Parent=gene-CCO34_RS11975;Dbxref=GenBank:WP_000622326.1;Name=WP_000622326.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=CCO34_RS11975;product=transcriptional regulator PocR;protein_id=WP_000622326.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 195718 196512 . - . ID=gene-CCO34_RS11980;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=CCO34_RS11980;old_locus_tag=CCO34_11975 NZ_NPMD01000004.1 Protein Homology CDS 195718 196512 . - 0 ID=cds-WP_001000023.1;Parent=gene-CCO34_RS11980;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=CCO34_RS11980;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 197037 197321 . + . ID=gene-CCO34_RS11985;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=CCO34_RS11985;old_locus_tag=CCO34_11980 NZ_NPMD01000004.1 Protein Homology CDS 197037 197321 . + 0 ID=cds-WP_001535271.1;Parent=gene-CCO34_RS11985;Dbxref=GenBank:WP_001535271.1;Name=WP_001535271.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=CCO34_RS11985;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001535271.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 197318 198130 . + . ID=gene-CCO34_RS11990;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=CCO34_RS11990;old_locus_tag=CCO34_11985 NZ_NPMD01000004.1 Protein Homology CDS 197318 198130 . + 0 ID=cds-WP_000097500.1;Parent=gene-CCO34_RS11990;Dbxref=GenBank:WP_000097500.1;Name=WP_000097500.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=CCO34_RS11990;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097500.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 198149 199813 . + . ID=gene-CCO34_RS11995;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=CCO34_RS11995;old_locus_tag=CCO34_11990 NZ_NPMD01000004.1 Protein Homology CDS 198149 199813 . + 0 ID=cds-WP_001256896.1;Parent=gene-CCO34_RS11995;Dbxref=GenBank:WP_001256896.1;Name=WP_001256896.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=CCO34_RS11995;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256896.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 199824 200498 . + . ID=gene-CCO34_RS12000;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=CCO34_RS12000;old_locus_tag=CCO34_11995 NZ_NPMD01000004.1 Protein Homology CDS 199824 200498 . + 0 ID=cds-WP_000405050.1;Parent=gene-CCO34_RS12000;Dbxref=GenBank:WP_000405050.1;Name=WP_000405050.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=CCO34_RS12000;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405050.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 200513 201034 . + . ID=gene-CCO34_RS12005;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=CCO34_RS12005;old_locus_tag=CCO34_12000 NZ_NPMD01000004.1 Protein Homology CDS 200513 201034 . + 0 ID=cds-WP_001090600.1;Parent=gene-CCO34_RS12005;Dbxref=GenBank:WP_001090600.1;Name=WP_001090600.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=CCO34_RS12005;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090600.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 201050 202882 . + . ID=gene-CCO34_RS12010;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=CCO34_RS12010;old_locus_tag=CCO34_12005 NZ_NPMD01000004.1 Protein Homology CDS 201050 202882 . + 0 ID=cds-WP_001268884.1;Parent=gene-CCO34_RS12010;Dbxref=GenBank:WP_001268884.1;Name=WP_001268884.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=CCO34_RS12010;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_001268884.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 202872 203222 . + . ID=gene-CCO34_RS12015;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=CCO34_RS12015;old_locus_tag=CCO34_12010 NZ_NPMD01000004.1 Protein Homology CDS 202872 203222 . + 0 ID=cds-WP_000377969.1;Parent=gene-CCO34_RS12015;Dbxref=GenBank:WP_000377969.1;Name=WP_000377969.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=CCO34_RS12015;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377969.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 203241 203516 . + . ID=gene-CCO34_RS12020;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=CCO34_RS12020;old_locus_tag=CCO34_12015 NZ_NPMD01000004.1 Protein Homology CDS 203241 203516 . + 0 ID=cds-WP_001057755.1;Parent=gene-CCO34_RS12020;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=CCO34_RS12020;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 203520 204002 . + . ID=gene-CCO34_RS12025;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=CCO34_RS12025;old_locus_tag=CCO34_12020 NZ_NPMD01000004.1 Protein Homology CDS 203520 204002 . + 0 ID=cds-WP_001284382.1;Parent=gene-CCO34_RS12025;Dbxref=GenBank:WP_001284382.1;Name=WP_001284382.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=CCO34_RS12025;product=propanediol utilization microcompartment protein PduK;protein_id=WP_001284382.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 204002 204634 . + . ID=gene-CCO34_RS12030;Name=CCO34_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12030;old_locus_tag=CCO34_12025 NZ_NPMD01000004.1 Protein Homology CDS 204002 204634 . + 0 ID=cds-WP_000356726.1;Parent=gene-CCO34_RS12030;Dbxref=GenBank:WP_000356726.1;Name=WP_000356726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=CCO34_RS12030;product=phosphate propanoyltransferase;protein_id=WP_000356726.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 204631 205122 . + . ID=gene-CCO34_RS12035;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=CCO34_RS12035;old_locus_tag=CCO34_12030 NZ_NPMD01000004.1 Protein Homology CDS 204631 205122 . + 0 ID=cds-WP_001012965.1;Parent=gene-CCO34_RS12035;Dbxref=GenBank:WP_001012965.1;Name=WP_001012965.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=CCO34_RS12035;product=propanediol utilization microcompartment protein PduM;protein_id=WP_001012965.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 205126 205401 . + . ID=gene-CCO34_RS12040;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=CCO34_RS12040;old_locus_tag=CCO34_12035 NZ_NPMD01000004.1 Protein Homology CDS 205126 205401 . + 0 ID=cds-WP_000549825.1;Parent=gene-CCO34_RS12040;Dbxref=GenBank:WP_000549825.1;Name=WP_000549825.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=CCO34_RS12040;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549825.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 205411 206421 . + . ID=gene-CCO34_RS12045;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=CCO34_RS12045;old_locus_tag=CCO34_12040 NZ_NPMD01000004.1 Protein Homology CDS 205411 206421 . + 0 ID=cds-WP_001029486.1;Parent=gene-CCO34_RS12045;Dbxref=GenBank:WP_001029486.1;Name=WP_001029486.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=CCO34_RS12045;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_001029486.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 206418 207812 . + . ID=gene-CCO34_RS12050;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=CCO34_RS12050;old_locus_tag=CCO34_12045 NZ_NPMD01000004.1 Protein Homology CDS 206418 207812 . + 0 ID=cds-WP_001097682.1;Parent=gene-CCO34_RS12050;Dbxref=GenBank:WP_001097682.1;Name=WP_001097682.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=CCO34_RS12050;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_001097682.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 207824 208936 . + . ID=gene-CCO34_RS12055;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=CCO34_RS12055;old_locus_tag=CCO34_12050 NZ_NPMD01000004.1 Protein Homology CDS 207824 208936 . + 0 ID=cds-WP_001091466.1;Parent=gene-CCO34_RS12055;Dbxref=GenBank:WP_001091466.1;Name=WP_001091466.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=CCO34_RS12055;product=1-propanol dehydrogenase PduQ;protein_id=WP_001091466.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 208933 210288 . + . ID=gene-CCO34_RS12060;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=CCO34_RS12060;old_locus_tag=CCO34_12055 NZ_NPMD01000004.1 Protein Homology CDS 208933 210288 . + 0 ID=cds-WP_000100778.1;Parent=gene-CCO34_RS12060;Dbxref=GenBank:WP_000100778.1;Name=WP_000100778.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=CCO34_RS12060;product=cobalamin reductase PduS;protein_id=WP_000100778.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 210291 210845 . + . ID=gene-CCO34_RS12065;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=CCO34_RS12065;old_locus_tag=CCO34_12060 NZ_NPMD01000004.1 Protein Homology CDS 210291 210845 . + 0 ID=cds-WP_000075772.1;Parent=gene-CCO34_RS12065;Dbxref=GenBank:WP_000075772.1;Name=WP_000075772.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=CCO34_RS12065;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075772.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 210845 211195 . + . ID=gene-CCO34_RS12070;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=CCO34_RS12070;old_locus_tag=CCO34_12065 NZ_NPMD01000004.1 Protein Homology CDS 210845 211195 . + 0 ID=cds-WP_000441103.1;Parent=gene-CCO34_RS12070;Dbxref=GenBank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=CCO34_RS12070;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 211200 211652 . + . ID=gene-CCO34_RS12075;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=CCO34_RS12075;old_locus_tag=CCO34_12070 NZ_NPMD01000004.1 Protein Homology CDS 211200 211652 . + 0 ID=cds-WP_000826278.1;Parent=gene-CCO34_RS12075;Dbxref=GenBank:WP_000826278.1;Name=WP_000826278.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=CCO34_RS12075;product=propanediol utilization protein PduV;protein_id=WP_000826278.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 211637 212851 . + . ID=gene-CCO34_RS12080;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=CCO34_RS12080;old_locus_tag=CCO34_12075 NZ_NPMD01000004.1 Protein Homology CDS 211637 212851 . + 0 ID=cds-WP_000120647.1;Parent=gene-CCO34_RS12080;Dbxref=GenBank:WP_000120647.1;Name=WP_000120647.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=CCO34_RS12080;product=propanediol utilization propionate kinase PduW;protein_id=WP_000120647.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 212945 213811 . + . ID=gene-CCO34_RS12085;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=CCO34_RS12085;old_locus_tag=CCO34_12080 NZ_NPMD01000004.1 Protein Homology CDS 212945 213811 . + 0 ID=cds-WP_001808089.1;Parent=gene-CCO34_RS12085;Dbxref=GenBank:WP_001808089.1;Name=WP_001808089.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=CCO34_RS12085;product=L-threonine kinase PduX;protein_id=WP_001808089.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 213845 214180 . - . ID=gene-CCO34_RS12090;Name=CCO34_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12090;old_locus_tag=CCO34_12085 NZ_NPMD01000004.1 Protein Homology CDS 213845 214180 . - 0 ID=cds-WP_000450405.1;Parent=gene-CCO34_RS12090;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=CCO34_RS12090;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 214425 215483 . - . ID=gene-CCO34_RS12095;Name=CCO34_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12095;old_locus_tag=CCO34_12090 NZ_NPMD01000004.1 Protein Homology CDS 214425 215483 . - 0 ID=cds-WP_001200858.1;Parent=gene-CCO34_RS12095;Dbxref=GenBank:WP_001200858.1;Name=WP_001200858.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=CCO34_RS12095;product=FUSC family protein;protein_id=WP_001200858.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 215602 216069 . - . ID=gene-CCO34_RS12105;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=CCO34_RS12105;old_locus_tag=CCO34_12100 NZ_NPMD01000004.1 Protein Homology CDS 215602 216069 . - 0 ID=cds-WP_000384326.1;Parent=gene-CCO34_RS12105;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=CCO34_RS12105;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 216222 217394 . - . ID=gene-CCO34_RS12110;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=CCO34_RS12110;old_locus_tag=CCO34_12105 NZ_NPMD01000004.1 Protein Homology CDS 216222 217394 . - 0 ID=cds-WP_000925042.1;Parent=gene-CCO34_RS12110;Dbxref=GenBank:WP_000925042.1;Name=WP_000925042.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=CCO34_RS12110;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000925042.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 217518 218282 . - . ID=gene-CCO34_RS12115;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=CCO34_RS12115;old_locus_tag=CCO34_12110 NZ_NPMD01000004.1 Protein Homology CDS 217518 218282 . - 0 ID=cds-WP_001659412.1;Parent=gene-CCO34_RS12115;Dbxref=GenBank:WP_001659412.1;Name=WP_001659412.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=CCO34_RS12115;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001659412.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 218279 218857 . - . ID=gene-CCO34_RS12120;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=CCO34_RS12120;old_locus_tag=CCO34_12115 NZ_NPMD01000004.1 Protein Homology CDS 218279 218857 . - 0 ID=cds-WP_001016236.1;Parent=gene-CCO34_RS12120;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=CCO34_RS12120;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 218872 221148 . - . ID=gene-CCO34_RS12125;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=CCO34_RS12125;old_locus_tag=CCO34_12120 NZ_NPMD01000004.1 Protein Homology CDS 218872 221148 . - 0 ID=cds-WP_023228922.1;Parent=gene-CCO34_RS12125;Dbxref=GenBank:WP_023228922.1;Name=WP_023228922.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=CCO34_RS12125;product=thiosulfate reductase PhsA;protein_id=WP_023228922.1;transl_table=11 NZ_NPMD01000004.1 RefSeq pseudogene 221408 221500 . - . ID=gene-CCO34_RS12130;Name=CCO34_RS12130;end_range=221500,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS12130;old_locus_tag=CCO34_12125;partial=true;pseudo=true;start_range=.,221408 NZ_NPMD01000004.1 Protein Homology CDS 221408 221500 . - 0 ID=cds-CCO34_RS12130;Parent=gene-CCO34_RS12130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=221500,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO34_RS12130;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,221408;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 221767 224115 . + . ID=gene-CCO34_RS12140;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=CCO34_RS12140;old_locus_tag=CCO34_12135 NZ_NPMD01000004.1 Protein Homology CDS 221767 224115 . + 0 ID=cds-WP_080176643.1;Parent=gene-CCO34_RS12140;Dbxref=GenBank:WP_080176643.1;Name=WP_080176643.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=CCO34_RS12140;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_080176643.1;transl_table=11 NZ_NPMD01000004.1 RefSeq pseudogene 224245 224322 . - . ID=gene-CCO34_RS25805;Name=CCO34_RS25805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25805;partial=true;pseudo=true;start_range=.,224245 NZ_NPMD01000004.1 Protein Homology CDS 224245 224322 . - 0 ID=cds-CCO34_RS25805;Parent=gene-CCO34_RS25805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=CCO34_RS25805;partial=true;product=hypothetical protein;pseudo=true;start_range=.,224245;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 224482 225912 . + . ID=gene-CCO34_RS12145;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=CCO34_RS12145;old_locus_tag=CCO34_12140 NZ_NPMD01000004.1 Protein Homology CDS 224482 225912 . + 0 ID=cds-WP_000216699.1;Parent=gene-CCO34_RS12145;Dbxref=GenBank:WP_000216699.1;Name=WP_000216699.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=CCO34_RS12145;product=exodeoxyribonuclease I;protein_id=WP_000216699.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 226048 227406 . - . ID=gene-CCO34_RS12150;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=CCO34_RS12150;old_locus_tag=CCO34_12145 NZ_NPMD01000004.1 Protein Homology CDS 226048 227406 . - 0 ID=cds-WP_001519005.1;Parent=gene-CCO34_RS12150;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=CCO34_RS12150;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 227396 227458 . - . ID=gene-CCO34_RS25315;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=CCO34_RS25315 NZ_NPMD01000004.1 Protein Homology CDS 227396 227458 . - 0 ID=cds-WP_096335044.1;Parent=gene-CCO34_RS25315;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=CCO34_RS25315;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 227692 228606 . - . ID=gene-CCO34_RS12155;Name=CCO34_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12155;old_locus_tag=CCO34_12150 NZ_NPMD01000004.1 Protein Homology CDS 227692 228606 . - 0 ID=cds-WP_000803316.1;Parent=gene-CCO34_RS12155;Dbxref=GenBank:WP_000803316.1;Name=WP_000803316.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=CCO34_RS12155;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 228652 229476 . - . ID=gene-CCO34_RS12160;Name=CCO34_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12160;old_locus_tag=CCO34_12155 NZ_NPMD01000004.1 Protein Homology CDS 228652 229476 . - 0 ID=cds-WP_000754712.1;Parent=gene-CCO34_RS12160;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=CCO34_RS12160;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 229639 229689 . + . ID=gene-CCO34_RS12165;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=CCO34_RS12165;old_locus_tag=CCO34_12160 NZ_NPMD01000004.1 Protein Homology CDS 229639 229689 . + 0 ID=cds-WP_001364200.1;Parent=gene-CCO34_RS12165;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=CCO34_RS12165;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_NPMD01000004.1 cmsearch sequence_feature 229665 229788 . + . ID=id-NZ_NPMD01000004.1:229665..229788;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMD01000004.1 RefSeq gene 229835 230734 . + . ID=gene-CCO34_RS12170;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CCO34_RS12170;old_locus_tag=CCO34_12165 NZ_NPMD01000004.1 Protein Homology CDS 229835 230734 . + 0 ID=cds-WP_000886604.1;Parent=gene-CCO34_RS12170;Dbxref=GenBank:WP_000886604.1;Name=WP_000886604.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=CCO34_RS12170;product=ATP phosphoribosyltransferase;protein_id=WP_000886604.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 230837 232141 . + . ID=gene-CCO34_RS12175;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CCO34_RS12175;old_locus_tag=CCO34_12170 NZ_NPMD01000004.1 Protein Homology CDS 230837 232141 . + 0 ID=cds-WP_000009622.1;Parent=gene-CCO34_RS12175;Dbxref=GenBank:WP_000009622.1;Name=WP_000009622.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=CCO34_RS12175;product=histidinol dehydrogenase;protein_id=WP_000009622.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 232138 233217 . + . ID=gene-CCO34_RS12180;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CCO34_RS12180;old_locus_tag=CCO34_12175 NZ_NPMD01000004.1 Protein Homology CDS 232138 233217 . + 0 ID=cds-WP_000102710.1;Parent=gene-CCO34_RS12180;Dbxref=GenBank:WP_000102710.1;Name=WP_000102710.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=CCO34_RS12180;product=histidinol-phosphate transaminase;protein_id=WP_000102710.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 233214 234281 . + . ID=gene-CCO34_RS12185;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CCO34_RS12185;old_locus_tag=CCO34_12180 NZ_NPMD01000004.1 Protein Homology CDS 233214 234281 . + 0 ID=cds-WP_023228919.1;Parent=gene-CCO34_RS12185;Dbxref=GenBank:WP_023228919.1;Name=WP_023228919.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=CCO34_RS12185;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_023228919.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 234281 234871 . + . ID=gene-CCO34_RS12190;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CCO34_RS12190;old_locus_tag=CCO34_12185 NZ_NPMD01000004.1 Protein Homology CDS 234281 234871 . + 0 ID=cds-WP_001103591.1;Parent=gene-CCO34_RS12190;Dbxref=GenBank:WP_001103591.1;Name=WP_001103591.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=CCO34_RS12190;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103591.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 234871 235608 . + . ID=gene-CCO34_RS12195;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CCO34_RS12195;old_locus_tag=CCO34_12190 NZ_NPMD01000004.1 Protein Homology CDS 234871 235608 . + 0 ID=cds-WP_000586406.1;Parent=gene-CCO34_RS12195;Dbxref=GenBank:WP_000586406.1;Name=WP_000586406.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=CCO34_RS12195;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586406.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 235590 236366 . + . ID=gene-CCO34_RS12200;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CCO34_RS12200;old_locus_tag=CCO34_12195 NZ_NPMD01000004.1 Protein Homology CDS 235590 236366 . + 0 ID=cds-WP_000880125.1;Parent=gene-CCO34_RS12200;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=CCO34_RS12200;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 236360 236971 . + . ID=gene-CCO34_RS12205;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CCO34_RS12205;old_locus_tag=CCO34_12200 NZ_NPMD01000004.1 Protein Homology CDS 236360 236971 . + 0 ID=cds-WP_000954846.1;Parent=gene-CCO34_RS12205;Dbxref=GenBank:WP_000954846.1;Name=WP_000954846.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=CCO34_RS12205;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954846.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 237066 238049 . - . ID=gene-CCO34_RS12210;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=CCO34_RS12210;old_locus_tag=CCO34_12205 NZ_NPMD01000004.1 Protein Homology CDS 237066 238049 . - 0 ID=cds-WP_000215258.1;Parent=gene-CCO34_RS12210;Dbxref=GenBank:WP_000215258.1;Name=WP_000215258.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=CCO34_RS12210;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_000215258.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 238192 239358 . - . ID=gene-CCO34_RS12215;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=CCO34_RS12215;old_locus_tag=CCO34_12210 NZ_NPMD01000004.1 Protein Homology CDS 238192 239358 . - 0 ID=cds-WP_000704825.1;Parent=gene-CCO34_RS12215;Dbxref=GenBank:WP_000704825.1;Name=WP_000704825.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=CCO34_RS12215;product=UDP-glucose 6-dehydrogenase;protein_id=WP_000704825.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 239594 241000 . - . ID=gene-CCO34_RS12225;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=CCO34_RS12225;old_locus_tag=CCO34_12220 NZ_NPMD01000004.1 Protein Homology CDS 239594 241000 . - 0 ID=cds-WP_000043530.1;Parent=gene-CCO34_RS12225;Dbxref=GenBank:WP_000043530.1;Name=WP_000043530.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=CCO34_RS12225;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043530.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 241164 242594 . - . ID=gene-CCO34_RS12230;Name=CCO34_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12230;old_locus_tag=CCO34_12225 NZ_NPMD01000004.1 Protein Homology CDS 241164 242594 . - 0 ID=cds-WP_000373565.1;Parent=gene-CCO34_RS12230;Dbxref=GenBank:WP_000373565.1;Name=WP_000373565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=CCO34_RS12230;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WP_000373565.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 242673 244109 . - . ID=gene-CCO34_RS12235;Name=CCO34_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12235;old_locus_tag=CCO34_12230 NZ_NPMD01000004.1 Protein Homology CDS 242673 244109 . - 0 ID=cds-WP_000790545.1;Parent=gene-CCO34_RS12235;Dbxref=GenBank:WP_000790545.1;Name=WP_000790545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000790543.1;locus_tag=CCO34_RS12235;product=phosphomannomutase;protein_id=WP_000790545.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 244117 245538 . - . ID=gene-CCO34_RS12240;Name=CCO34_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12240;old_locus_tag=CCO34_12235 NZ_NPMD01000004.1 Protein Homology CDS 244117 245538 . - 0 ID=cds-WP_000040079.1;Parent=gene-CCO34_RS12240;Dbxref=GenBank:WP_000040079.1;Name=WP_000040079.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533122.1;locus_tag=CCO34_RS12240;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_000040079.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 245553 246710 . - . ID=gene-CCO34_RS12245;Name=CCO34_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12245;old_locus_tag=CCO34_12240 NZ_NPMD01000004.1 Protein Homology CDS 245553 246710 . - 0 ID=cds-WP_000405025.1;Parent=gene-CCO34_RS12245;Dbxref=GenBank:WP_000405025.1;Name=WP_000405025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749599.1;locus_tag=CCO34_RS12245;product=glycosyltransferase family 4 protein;protein_id=WP_000405025.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 246697 247707 . - . ID=gene-CCO34_RS12250;Name=CCO34_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12250;old_locus_tag=CCO34_12245 NZ_NPMD01000004.1 Protein Homology CDS 246697 247707 . - 0 ID=cds-WP_001060530.1;Parent=gene-CCO34_RS12250;Dbxref=GenBank:WP_001060530.1;Name=WP_001060530.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060530.1;locus_tag=CCO34_RS12250;product=glycosyltransferase family 4 protein;protein_id=WP_001060530.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 247707 248906 . - . ID=gene-CCO34_RS12255;Name=CCO34_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12255;old_locus_tag=CCO34_12250 NZ_NPMD01000004.1 Protein Homology CDS 247707 248906 . - 0 ID=cds-WP_000936591.1;Parent=gene-CCO34_RS12255;Dbxref=GenBank:WP_000936591.1;Name=WP_000936591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936591.1;locus_tag=CCO34_RS12255;product=O-antigen polymerase;protein_id=WP_000936591.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 249000 250043 . - . ID=gene-CCO34_RS12260;Name=CCO34_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12260;old_locus_tag=CCO34_12255 NZ_NPMD01000004.1 Protein Homology CDS 249000 250043 . - 0 ID=cds-WP_001100429.1;Parent=gene-CCO34_RS12260;Dbxref=GenBank:WP_001100429.1;Name=WP_001100429.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100432.1;locus_tag=CCO34_RS12260;product=glycosyltransferase family 2 protein;protein_id=WP_001100429.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 250045 250659 . - . ID=gene-CCO34_RS12265;Name=CCO34_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12265;old_locus_tag=CCO34_12260 NZ_NPMD01000004.1 Protein Homology CDS 250045 250659 . - 0 ID=cds-WP_001669240.1;Parent=gene-CCO34_RS12265;Dbxref=GenBank:WP_001669240.1;Name=WP_001669240.1;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669240.1;locus_tag=CCO34_RS12265;product=acyltransferase;protein_id=WP_001669240.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 250706 251668 . - . ID=gene-CCO34_RS12270;Name=CCO34_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12270;old_locus_tag=CCO34_12265 NZ_NPMD01000004.1 Protein Homology CDS 250706 251668 . - 0 ID=cds-WP_000038917.1;Parent=gene-CCO34_RS12270;Dbxref=GenBank:WP_000038917.1;Name=WP_000038917.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038917.1;locus_tag=CCO34_RS12270;product=glycosyltransferase family 2 protein;protein_id=WP_000038917.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 251661 253001 . - . ID=gene-CCO34_RS12275;Name=CCO34_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12275;old_locus_tag=CCO34_12270 NZ_NPMD01000004.1 Protein Homology CDS 251661 253001 . - 0 ID=cds-WP_001079811.1;Parent=gene-CCO34_RS12275;Dbxref=GenBank:WP_001079811.1;Name=WP_001079811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079813.1;locus_tag=CCO34_RS12275;product=membrane protein;protein_id=WP_001079811.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 253001 253882 . - . ID=gene-CCO34_RS12280;Name=rfbJ;gbkey=Gene;gene=rfbJ;gene_biotype=protein_coding;locus_tag=CCO34_RS12280;old_locus_tag=CCO34_12275 NZ_NPMD01000004.1 Protein Homology CDS 253001 253882 . - 0 ID=cds-WP_000887844.1;Parent=gene-CCO34_RS12280;Dbxref=GenBank:WP_000887844.1;Name=WP_000887844.1;gbkey=CDS;gene=rfbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887844.1;locus_tag=CCO34_RS12280;product=CDP-abequose synthase;protein_id=WP_000887844.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 253896 255209 . - . ID=gene-CCO34_RS12285;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=CCO34_RS12285;old_locus_tag=CCO34_12280 NZ_NPMD01000004.1 Protein Homology CDS 253896 255209 . - 0 ID=cds-WP_000126351.1;Parent=gene-CCO34_RS12285;Dbxref=GenBank:WP_000126351.1;Name=WP_000126351.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=CCO34_RS12285;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_000126351.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 255236 256315 . - . ID=gene-CCO34_RS12290;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=CCO34_RS12290;old_locus_tag=CCO34_12285 NZ_NPMD01000004.1 Protein Homology CDS 255236 256315 . - 0 ID=cds-WP_000565902.1;Parent=gene-CCO34_RS12290;Dbxref=GenBank:WP_000565902.1;Name=WP_000565902.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=CCO34_RS12290;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_000565902.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 256320 257093 . - . ID=gene-CCO34_RS12295;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=CCO34_RS12295;old_locus_tag=CCO34_12290 NZ_NPMD01000004.1 Protein Homology CDS 256320 257093 . - 0 ID=cds-WP_000648783.1;Parent=gene-CCO34_RS12295;Dbxref=GenBank:WP_000648783.1;Name=WP_000648783.1;Ontology_term=GO:0009243,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=CCO34_RS12295;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_000648783.1;transl_table=11 NZ_NPMD01000004.1 RefSeq pseudogene 257090 258083 . - . ID=gene-CCO34_RS12300;Name=CCO34_RS12300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS12300;old_locus_tag=CCO34_12295;pseudo=true NZ_NPMD01000004.1 Protein Homology CDS 257090 258083 . - 0 ID=cds-CCO34_RS12300;Parent=gene-CCO34_RS12300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=CCO34_RS12300;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;pseudo=true;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 258089 258640 . - . ID=gene-CCO34_RS12305;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=CCO34_RS12305;old_locus_tag=CCO34_12300 NZ_NPMD01000004.1 Protein Homology CDS 258089 258640 . - 0 ID=cds-WP_000973714.1;Parent=gene-CCO34_RS12305;Dbxref=GenBank:WP_000973714.1;Name=WP_000973714.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=CCO34_RS12305;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_000973714.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 258641 259519 . - . ID=gene-CCO34_RS12310;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CCO34_RS12310;old_locus_tag=CCO34_12305 NZ_NPMD01000004.1 Protein Homology CDS 258641 259519 . - 0 ID=cds-WP_000857530.1;Parent=gene-CCO34_RS12310;Dbxref=GenBank:WP_000857530.1;Name=WP_000857530.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=CCO34_RS12310;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000857530.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 259567 260466 . - . ID=gene-CCO34_RS12315;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=CCO34_RS12315;old_locus_tag=CCO34_12310 NZ_NPMD01000004.1 Protein Homology CDS 259567 260466 . - 0 ID=cds-WP_001023659.1;Parent=gene-CCO34_RS12315;Dbxref=GenBank:WP_001023659.1;Name=WP_001023659.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=CCO34_RS12315;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_001023659.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 260466 261551 . - . ID=gene-CCO34_RS12320;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=CCO34_RS12320;old_locus_tag=CCO34_12315 NZ_NPMD01000004.1 Protein Homology CDS 260466 261551 . - 0 ID=cds-WP_000697841.1;Parent=gene-CCO34_RS12320;Dbxref=GenBank:WP_000697841.1;Name=WP_000697841.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=CCO34_RS12320;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000697841.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 261928 262821 . - . ID=gene-CCO34_RS12325;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=CCO34_RS12325;old_locus_tag=CCO34_12320 NZ_NPMD01000004.1 Protein Homology CDS 261928 262821 . - 0 ID=cds-WP_000981471.1;Parent=gene-CCO34_RS12325;Dbxref=GenBank:WP_000981471.1;Name=WP_000981471.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=CCO34_RS12325;product=GalU regulator GalF;protein_id=WP_000981471.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 262999 264402 . - . ID=gene-CCO34_RS12330;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=CCO34_RS12330;old_locus_tag=CCO34_12325 NZ_NPMD01000004.1 Protein Homology CDS 262999 264402 . - 0 ID=cds-WP_080180948.1;Parent=gene-CCO34_RS12330;Dbxref=GenBank:WP_080180948.1;Name=WP_080180948.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=CCO34_RS12330;product=colanic acid biosynthesis protein WcaM;protein_id=WP_080180948.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 264413 265633 . - . ID=gene-CCO34_RS12335;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=CCO34_RS12335;old_locus_tag=CCO34_12330 NZ_NPMD01000004.1 Protein Homology CDS 264413 265633 . - 0 ID=cds-WP_000868510.1;Parent=gene-CCO34_RS12335;Dbxref=GenBank:WP_000868510.1;Name=WP_000868510.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=CCO34_RS12335;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_000868510.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 265630 266910 . - . ID=gene-CCO34_RS12340;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=CCO34_RS12340;old_locus_tag=CCO34_12335 NZ_NPMD01000004.1 Protein Homology CDS 265630 266910 . - 0 ID=cds-WP_000770899.1;Parent=gene-CCO34_RS12340;Dbxref=GenBank:WP_000770899.1;Name=WP_000770899.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=CCO34_RS12340;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_000770899.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 266932 268410 . - . ID=gene-CCO34_RS12345;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=CCO34_RS12345;old_locus_tag=CCO34_12340 NZ_NPMD01000004.1 Protein Homology CDS 266932 268410 . - 0 ID=cds-WP_000058677.1;Parent=gene-CCO34_RS12345;Dbxref=GenBank:WP_000058677.1;Name=WP_000058677.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=CCO34_RS12345;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_000058677.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 268543 269937 . - . ID=gene-CCO34_RS12350;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=CCO34_RS12350;old_locus_tag=CCO34_12345 NZ_NPMD01000004.1 Protein Homology CDS 268543 269937 . - 0 ID=cds-WP_000183157.1;Parent=gene-CCO34_RS12350;Dbxref=GenBank:WP_000183157.1;Name=WP_000183157.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=CCO34_RS12350;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183157.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 269991 271361 . - . ID=gene-CCO34_RS12355;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=CCO34_RS12355;old_locus_tag=CCO34_12350 NZ_NPMD01000004.1 Protein Homology CDS 269991 271361 . - 0 ID=cds-WP_000164203.1;Parent=gene-CCO34_RS12355;Dbxref=GenBank:WP_000164203.1;Name=WP_000164203.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=CCO34_RS12355;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_000164203.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 271472 272914 . - . ID=gene-CCO34_RS12360;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=CCO34_RS12360;old_locus_tag=CCO34_12355 NZ_NPMD01000004.1 Protein Homology CDS 271472 272914 . - 0 ID=cds-WP_000605952.1;Parent=gene-CCO34_RS12360;Dbxref=GenBank:WP_000605952.1;Name=WP_000605952.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=CCO34_RS12360;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000605952.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 272911 274134 . - . ID=gene-CCO34_RS12365;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=CCO34_RS12365;old_locus_tag=CCO34_12360 NZ_NPMD01000004.1 Protein Homology CDS 272911 274134 . - 0 ID=cds-WP_000699654.1;Parent=gene-CCO34_RS12365;Dbxref=GenBank:WP_000699654.1;Name=WP_000699654.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=CCO34_RS12365;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699654.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 274131 274604 . - . ID=gene-CCO34_RS12370;Name=CCO34_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12370;old_locus_tag=CCO34_12365 NZ_NPMD01000004.1 Protein Homology CDS 274131 274604 . - 0 ID=cds-WP_001535214.1;Parent=gene-CCO34_RS12370;Dbxref=GenBank:WP_001535214.1;Name=WP_001535214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=CCO34_RS12370;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001535214.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 274607 275572 . - . ID=gene-CCO34_RS12375;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=CCO34_RS12375;old_locus_tag=CCO34_12370 NZ_NPMD01000004.1 Protein Homology CDS 274607 275572 . - 0 ID=cds-WP_001041701.1;Parent=gene-CCO34_RS12375;Dbxref=GenBank:WP_001041701.1;Name=WP_001041701.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=CCO34_RS12375;product=GDP-L-fucose synthase;protein_id=WP_001041701.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 275575 276696 . - . ID=gene-CCO34_RS12380;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=CCO34_RS12380;old_locus_tag=CCO34_12375 NZ_NPMD01000004.1 Protein Homology CDS 275575 276696 . - 0 ID=cds-WP_000048160.1;Parent=gene-CCO34_RS12380;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=CCO34_RS12380;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 276720 277274 . - . ID=gene-CCO34_RS12385;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=CCO34_RS12385;old_locus_tag=CCO34_12380 NZ_NPMD01000004.1 Protein Homology CDS 276720 277274 . - 0 ID=cds-WP_001153603.1;Parent=gene-CCO34_RS12385;Dbxref=GenBank:WP_001153603.1;Name=WP_001153603.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=CCO34_RS12385;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153603.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 277290 278036 . - . ID=gene-CCO34_RS12390;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=CCO34_RS12390;old_locus_tag=CCO34_12385 NZ_NPMD01000004.1 Protein Homology CDS 277290 278036 . - 0 ID=cds-WP_000480128.1;Parent=gene-CCO34_RS12390;Dbxref=GenBank:WP_000480128.1;Name=WP_000480128.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=CCO34_RS12390;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000480128.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 278049 279263 . - . ID=gene-CCO34_RS12395;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=CCO34_RS12395;old_locus_tag=CCO34_12390 NZ_NPMD01000004.1 Protein Homology CDS 278049 279263 . - 0 ID=cds-WP_000091389.1;Parent=gene-CCO34_RS12395;Dbxref=GenBank:WP_000091389.1;Name=WP_000091389.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091389.1;locus_tag=CCO34_RS12395;product=colanic acid polymerase WcaD;protein_id=WP_000091389.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 279238 280455 . - . ID=gene-CCO34_RS12400;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=CCO34_RS12400;old_locus_tag=CCO34_12395 NZ_NPMD01000004.1 Protein Homology CDS 279238 280455 . - 0 ID=cds-WP_001023825.1;Parent=gene-CCO34_RS12400;Dbxref=GenBank:WP_001023825.1;Name=WP_001023825.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=CCO34_RS12400;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_001023825.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 280452 280940 . - . ID=gene-CCO34_RS12405;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=CCO34_RS12405;old_locus_tag=CCO34_12400 NZ_NPMD01000004.1 Protein Homology CDS 280452 280940 . - 0 ID=cds-WP_000888724.1;Parent=gene-CCO34_RS12405;Dbxref=GenBank:WP_000888724.1;Name=WP_000888724.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=CCO34_RS12405;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888724.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 280943 281785 . - . ID=gene-CCO34_RS12410;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=CCO34_RS12410;old_locus_tag=CCO34_12405 NZ_NPMD01000004.1 Protein Homology CDS 280943 281785 . - 0 ID=cds-WP_000205695.1;Parent=gene-CCO34_RS12410;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=CCO34_RS12410;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 281872 284031 . - . ID=gene-CCO34_RS12415;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=CCO34_RS12415;old_locus_tag=CCO34_12410 NZ_NPMD01000004.1 Protein Homology CDS 281872 284031 . - 0 ID=cds-WP_000137231.1;Parent=gene-CCO34_RS12415;Dbxref=GenBank:WP_000137231.1;Name=WP_000137231.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=CCO34_RS12415;product=tyrosine-protein kinase Wzc;protein_id=WP_000137231.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 284028 284477 . - . ID=gene-CCO34_RS12420;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=CCO34_RS12420;old_locus_tag=CCO34_12415 NZ_NPMD01000004.1 Protein Homology CDS 284028 284477 . - 0 ID=cds-WP_000482226.1;Parent=gene-CCO34_RS12420;Dbxref=GenBank:WP_000482226.1;Name=WP_000482226.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=CCO34_RS12420;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482226.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 284483 285622 . - . ID=gene-CCO34_RS12425;Name=CCO34_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12425;old_locus_tag=CCO34_12420 NZ_NPMD01000004.1 Protein Homology CDS 284483 285622 . - 0 ID=cds-WP_000978076.1;Parent=gene-CCO34_RS12425;Dbxref=GenBank:WP_000978076.1;Name=WP_000978076.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=CCO34_RS12425;product=polysaccharide export protein;protein_id=WP_000978076.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 286297 287877 . + . ID=gene-CCO34_RS12435;Name=CCO34_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12435;old_locus_tag=CCO34_12430 NZ_NPMD01000004.1 Protein Homology CDS 286297 287877 . + 0 ID=cds-WP_000454723.1;Parent=gene-CCO34_RS12435;Dbxref=GenBank:WP_000454723.1;Name=WP_000454723.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=CCO34_RS12435;product=TerC family protein;protein_id=WP_000454723.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 287963 289819 . - . ID=gene-CCO34_RS12440;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=CCO34_RS12440;old_locus_tag=CCO34_12435 NZ_NPMD01000004.1 Protein Homology CDS 287963 289819 . - 0 ID=cds-WP_001252268.1;Parent=gene-CCO34_RS12440;Dbxref=GenBank:WP_001252268.1;Name=WP_001252268.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=CCO34_RS12440;product=outer membrane assembly protein AsmA;protein_id=WP_001252268.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 289858 290439 . - . ID=gene-CCO34_RS12445;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CCO34_RS12445;old_locus_tag=CCO34_12440 NZ_NPMD01000004.1 Protein Homology CDS 289858 290439 . - 0 ID=cds-WP_001234783.1;Parent=gene-CCO34_RS12445;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=CCO34_RS12445;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 290530 291171 . - . ID=gene-CCO34_RS12450;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CCO34_RS12450;old_locus_tag=CCO34_12445 NZ_NPMD01000004.1 Protein Homology CDS 290530 291171 . - 0 ID=cds-WP_000132082.1;Parent=gene-CCO34_RS12450;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=CCO34_RS12450;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 291502 294492 . + . ID=gene-CCO34_RS12455;Name=CCO34_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12455;old_locus_tag=CCO34_12450 NZ_NPMD01000004.1 Protein Homology CDS 291502 294492 . + 0 ID=cds-WP_000042945.1;Parent=gene-CCO34_RS12455;Dbxref=GenBank:WP_000042945.1;Name=WP_000042945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=CCO34_RS12455;product=MASE1 domain-containing protein;protein_id=WP_000042945.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 294460 295329 . - . ID=gene-CCO34_RS12460;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=CCO34_RS12460;old_locus_tag=CCO34_12455 NZ_NPMD01000004.1 Protein Homology CDS 294460 295329 . - 0 ID=cds-WP_000494703.1;Parent=gene-CCO34_RS12460;Dbxref=GenBank:WP_000494703.1;Name=WP_000494703.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=CCO34_RS12460;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000494703.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 295463 296815 . + . ID=gene-CCO34_RS12470;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=CCO34_RS12470;old_locus_tag=CCO34_12465 NZ_NPMD01000004.1 Protein Homology CDS 295463 296815 . + 0 ID=cds-WP_000469628.1;Parent=gene-CCO34_RS12470;Dbxref=GenBank:WP_000469628.1;Name=WP_000469628.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=CCO34_RS12470;product=molecular chaperone;protein_id=WP_000469628.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 296914 296973 . - . ID=gene-CCO34_RS25320;Name=CCO34_RS25320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25320 NZ_NPMD01000004.1 Protein Homology CDS 296914 296973 . - 0 ID=cds-WP_105887528.1;Parent=gene-CCO34_RS25320;Dbxref=GenBank:WP_105887528.1;Name=WP_105887528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=CCO34_RS25320;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_105887528.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 297256 298497 . + . ID=gene-CCO34_RS12475;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=CCO34_RS12475;old_locus_tag=CCO34_12470 NZ_NPMD01000004.1 Protein Homology CDS 297256 298497 . + 0 ID=cds-WP_000678808.1;Parent=gene-CCO34_RS12475;Dbxref=GenBank:WP_000678808.1;Name=WP_000678808.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=CCO34_RS12475;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678808.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 298497 301619 . + . ID=gene-CCO34_RS12480;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=CCO34_RS12480;old_locus_tag=CCO34_12475 NZ_NPMD01000004.1 Protein Homology CDS 298497 301619 . + 0 ID=cds-WP_001197799.1;Parent=gene-CCO34_RS12480;Dbxref=GenBank:WP_001197799.1;Name=WP_001197799.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=CCO34_RS12480;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_001197799.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 301620 304700 . + . ID=gene-CCO34_RS12485;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=CCO34_RS12485;old_locus_tag=CCO34_12480 NZ_NPMD01000004.1 Protein Homology CDS 301620 304700 . + 0 ID=cds-WP_001210073.1;Parent=gene-CCO34_RS12485;Dbxref=GenBank:WP_001210073.1;Name=WP_001210073.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=CCO34_RS12485;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_001210073.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 304697 306109 . + . ID=gene-CCO34_RS12490;Name=CCO34_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12490;old_locus_tag=CCO34_12485 NZ_NPMD01000004.1 Protein Homology CDS 304697 306109 . + 0 ID=cds-WP_000137818.1;Parent=gene-CCO34_RS12490;Dbxref=GenBank:WP_000137818.1;Name=WP_000137818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=CCO34_RS12490;product=MFS transporter;protein_id=WP_000137818.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 306109 307512 . + . ID=gene-CCO34_RS12495;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=CCO34_RS12495;old_locus_tag=CCO34_12490 NZ_NPMD01000004.1 Protein Homology CDS 306109 307512 . + 0 ID=cds-WP_000870075.1;Parent=gene-CCO34_RS12495;Dbxref=GenBank:WP_000870075.1;Name=WP_000870075.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=CCO34_RS12495;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000870075.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 307509 308231 . + . ID=gene-CCO34_RS12500;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=CCO34_RS12500;old_locus_tag=CCO34_12495 NZ_NPMD01000004.1 Protein Homology CDS 307509 308231 . + 0 ID=cds-WP_000137855.1;Parent=gene-CCO34_RS12500;Dbxref=GenBank:WP_000137855.1;Name=WP_000137855.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=CCO34_RS12500;product=two-component system response regulator BaeR;protein_id=WP_000137855.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 308501 309703 . + . ID=gene-CCO34_RS12510;Name=CCO34_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12510;old_locus_tag=CCO34_12505 NZ_NPMD01000004.1 Protein Homology CDS 308501 309703 . + 0 ID=cds-WP_000141061.1;Parent=gene-CCO34_RS12510;Dbxref=GenBank:WP_000141061.1;Name=WP_000141061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=CCO34_RS12510;product=hypothetical protein;protein_id=WP_000141061.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 309703 310419 . + . ID=gene-CCO34_RS12515;Name=CCO34_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12515;old_locus_tag=CCO34_12510 NZ_NPMD01000004.1 Protein Homology CDS 309703 310419 . + 0 ID=cds-WP_000498587.1;Parent=gene-CCO34_RS12515;Dbxref=GenBank:WP_000498587.1;Name=WP_000498587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=CCO34_RS12515;product=DUF1266 domain-containing protein;protein_id=WP_000498587.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 310430 312541 . + . ID=gene-CCO34_RS12520;Name=CCO34_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12520;old_locus_tag=CCO34_12515 NZ_NPMD01000004.1 Protein Homology CDS 310430 312541 . + 0 ID=cds-WP_000434254.1;Parent=gene-CCO34_RS12520;Dbxref=GenBank:WP_000434254.1;Name=WP_000434254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=CCO34_RS12520;product=DUF4034 domain-containing protein;protein_id=WP_000434254.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 312657 314018 . + . ID=gene-CCO34_RS12525;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=CCO34_RS12525;old_locus_tag=CCO34_12520 NZ_NPMD01000004.1 Protein Homology CDS 312657 314018 . + 0 ID=cds-WP_001517981.1;Parent=gene-CCO34_RS12525;Dbxref=GenBank:WP_001517981.1;Name=WP_001517981.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=CCO34_RS12525;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_001517981.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 314469 315515 . + . ID=gene-CCO34_RS12530;Name=sseK2;gbkey=Gene;gene=sseK2;gene_biotype=protein_coding;locus_tag=CCO34_RS12530;old_locus_tag=CCO34_12525 NZ_NPMD01000004.1 Protein Homology CDS 314469 315515 . + 0 ID=cds-WP_077906044.1;Parent=gene-CCO34_RS12530;Dbxref=GenBank:WP_077906044.1;Name=WP_077906044.1;gbkey=CDS;gene=sseK2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=CCO34_RS12530;product=type III secretion system effector arginine glycosyltransferase SseK2;protein_id=WP_077906044.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 315551 315967 . - . ID=gene-CCO34_RS12535;Name=CCO34_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12535;old_locus_tag=CCO34_12530 NZ_NPMD01000004.1 Protein Homology CDS 315551 315967 . - 0 ID=cds-WP_023228917.1;Parent=gene-CCO34_RS12535;Dbxref=GenBank:WP_023228917.1;Name=WP_023228917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=CCO34_RS12535;product=CesT family type III secretion system chaperone;protein_id=WP_023228917.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 316089 316424 . - . ID=gene-CCO34_RS12540;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=CCO34_RS12540;old_locus_tag=CCO34_12535 NZ_NPMD01000004.1 Protein Homology CDS 316089 316424 . - 0 ID=cds-WP_001598416.1;Parent=gene-CCO34_RS12540;Dbxref=GenBank:WP_001598416.1;Name=WP_001598416.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=CCO34_RS12540;product=type III secretion system effector SteD;protein_id=WP_001598416.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 316986 317885 . + . ID=gene-CCO34_RS12545;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=CCO34_RS12545;old_locus_tag=CCO34_12540 NZ_NPMD01000004.1 Protein Homology CDS 316986 317885 . + 0 ID=cds-WP_001273395.1;Parent=gene-CCO34_RS12545;Dbxref=GenBank:WP_001273395.1;Name=WP_001273395.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=CCO34_RS12545;product=lipid kinase YegS;protein_id=WP_001273395.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 317938 318990 . - . ID=gene-CCO34_RS12550;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=CCO34_RS12550;old_locus_tag=CCO34_12545 NZ_NPMD01000004.1 Protein Homology CDS 317938 318990 . - 0 ID=cds-WP_000129590.1;Parent=gene-CCO34_RS12550;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=CCO34_RS12550;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 319244 320515 . + . ID=gene-CCO34_RS12555;Name=CCO34_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12555;old_locus_tag=CCO34_12550 NZ_NPMD01000004.1 Protein Homology CDS 319244 320515 . + 0 ID=cds-WP_000858701.1;Parent=gene-CCO34_RS12555;Dbxref=GenBank:WP_000858701.1;Name=WP_000858701.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=CCO34_RS12555;product=nucleoside permease;protein_id=WP_000858701.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 320512 321516 . + . ID=gene-CCO34_RS12560;Name=CCO34_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12560;old_locus_tag=CCO34_12555 NZ_NPMD01000004.1 Protein Homology CDS 320512 321516 . + 0 ID=cds-WP_000642798.1;Parent=gene-CCO34_RS12560;Dbxref=GenBank:WP_000642798.1;Name=WP_000642798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=CCO34_RS12560;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642798.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 321513 322478 . + . ID=gene-CCO34_RS12565;Name=CCO34_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12565;old_locus_tag=CCO34_12560 NZ_NPMD01000004.1 Protein Homology CDS 321513 322478 . + 0 ID=cds-WP_001012659.1;Parent=gene-CCO34_RS12565;Dbxref=GenBank:WP_001012659.1;Name=WP_001012659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=CCO34_RS12565;product=PfkB family carbohydrate kinase;protein_id=WP_001012659.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 322452 323198 . - . ID=gene-CCO34_RS12570;Name=CCO34_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12570;old_locus_tag=CCO34_12565 NZ_NPMD01000004.1 Protein Homology CDS 322452 323198 . - 0 ID=cds-WP_000434062.1;Parent=gene-CCO34_RS12570;Dbxref=GenBank:WP_000434062.1;Name=WP_000434062.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=CCO34_RS12570;product=GntR family transcriptional regulator;protein_id=WP_000434062.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 323234 324034 . - . ID=gene-CCO34_RS12575;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CCO34_RS12575;old_locus_tag=CCO34_12570 NZ_NPMD01000004.1 Protein Homology CDS 323234 324034 . - 0 ID=cds-WP_001188957.1;Parent=gene-CCO34_RS12575;Dbxref=GenBank:WP_001188957.1;Name=WP_001188957.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=CCO34_RS12575;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_001188957.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 324021 324818 . - . ID=gene-CCO34_RS12580;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CCO34_RS12580;old_locus_tag=CCO34_12575 NZ_NPMD01000004.1 Protein Homology CDS 324021 324818 . - 0 ID=cds-WP_001182158.1;Parent=gene-CCO34_RS12580;Dbxref=GenBank:WP_001182158.1;Name=WP_001182158.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=CCO34_RS12580;product=hydroxyethylthiazole kinase;protein_id=WP_001182158.1;transl_table=11 NZ_NPMD01000004.1 cmsearch riboswitch 324850 324946 . - . ID=id-NZ_NPMD01000004.1:324850..324946;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMD01000004.1 RefSeq gene 325228 325542 . + . ID=gene-CCO34_RS12585;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=CCO34_RS12585;old_locus_tag=CCO34_12580 NZ_NPMD01000004.1 Protein Homology CDS 325228 325542 . + 0 ID=cds-WP_000837534.1;Parent=gene-CCO34_RS12585;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=CCO34_RS12585;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 325804 326811 . - . ID=gene-CCO34_RS12590;Name=CCO34_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12590;old_locus_tag=CCO34_12585 NZ_NPMD01000004.1 Protein Homology CDS 325804 326811 . - 0 ID=cds-WP_000765280.1;Parent=gene-CCO34_RS12590;Dbxref=GenBank:WP_000765280.1;Name=WP_000765280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461093.1;locus_tag=CCO34_RS12590;product=putative fimbrial-like adhesin protein;protein_id=WP_000765280.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 326827 329316 . - . ID=gene-CCO34_RS12595;Name=CCO34_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12595;old_locus_tag=CCO34_12590 NZ_NPMD01000004.1 Protein Homology CDS 326827 329316 . - 0 ID=cds-WP_000945363.1;Parent=gene-CCO34_RS12595;Dbxref=GenBank:WP_000945363.1;Name=WP_000945363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461094.1;locus_tag=CCO34_RS12595;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000945363.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 329330 330013 . - . ID=gene-CCO34_RS12600;Name=stcB;gbkey=Gene;gene=stcB;gene_biotype=protein_coding;locus_tag=CCO34_RS12600;old_locus_tag=CCO34_12595 NZ_NPMD01000004.1 Protein Homology CDS 329330 330013 . - 0 ID=cds-WP_000698775.1;Parent=gene-CCO34_RS12600;Dbxref=GenBank:WP_000698775.1;Name=WP_000698775.1;gbkey=CDS;gene=stcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461095.1;locus_tag=CCO34_RS12600;product=fimbrial biogenesis chaperone StcB;protein_id=WP_000698775.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 330069 330599 . - . ID=gene-CCO34_RS12605;Name=stcA;gbkey=Gene;gene=stcA;gene_biotype=protein_coding;locus_tag=CCO34_RS12605;old_locus_tag=CCO34_12600 NZ_NPMD01000004.1 Protein Homology CDS 330069 330599 . - 0 ID=cds-WP_000830686.1;Parent=gene-CCO34_RS12605;Dbxref=GenBank:WP_000830686.1;Name=WP_000830686.1;gbkey=CDS;gene=stcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461096.1;locus_tag=CCO34_RS12605;product=Stc fimbria major subunit StcA;protein_id=WP_000830686.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 330878 331159 . - . ID=gene-CCO34_RS12610;Name=CCO34_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12610;old_locus_tag=CCO34_12605 NZ_NPMD01000004.1 Protein Homology CDS 330878 331159 . - 0 ID=cds-WP_000760404.1;Parent=gene-CCO34_RS12610;Dbxref=GenBank:WP_000760404.1;Name=WP_000760404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=CCO34_RS12610;product=YehE family protein;protein_id=WP_000760404.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 331437 332546 . - . ID=gene-CCO34_RS12615;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=CCO34_RS12615;old_locus_tag=CCO34_12610 NZ_NPMD01000004.1 Protein Homology CDS 331437 332546 . - 0 ID=cds-WP_001005424.1;Parent=gene-CCO34_RS12615;Dbxref=GenBank:WP_001005424.1;Name=WP_001005424.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=CCO34_RS12615;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005424.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 332711 334744 . + . ID=gene-CCO34_RS12620;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CCO34_RS12620;old_locus_tag=CCO34_12615 NZ_NPMD01000004.1 Protein Homology CDS 332711 334744 . + 0 ID=cds-WP_000195333.1;Parent=gene-CCO34_RS12620;Dbxref=GenBank:WP_000195333.1;Name=WP_000195333.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=CCO34_RS12620;product=methionine--tRNA ligase;protein_id=WP_000195333.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 334985 335443 . + . ID=gene-CCO34_RS12625;Name=CCO34_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12625;old_locus_tag=CCO34_12620 NZ_NPMD01000004.1 Protein Homology CDS 334985 335443 . + 0 ID=cds-WP_000703137.1;Parent=gene-CCO34_RS12625;Dbxref=GenBank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=CCO34_RS12625;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 335615 336145 . + . ID=gene-CCO34_RS12630;Name=CCO34_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12630;old_locus_tag=CCO34_12625 NZ_NPMD01000004.1 Protein Homology CDS 335615 336145 . + 0 ID=cds-WP_001197951.1;Parent=gene-CCO34_RS12630;Dbxref=GenBank:WP_001197951.1;Name=WP_001197951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=CCO34_RS12630;product=YehR family lipoprotein;protein_id=WP_001197951.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 336202 336669 . - . ID=gene-CCO34_RS12635;Name=CCO34_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12635;old_locus_tag=CCO34_12630 NZ_NPMD01000004.1 Protein Homology CDS 336202 336669 . - 0 ID=cds-WP_000950413.1;Parent=gene-CCO34_RS12635;Dbxref=GenBank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=CCO34_RS12635;product=DUF1456 family protein;protein_id=WP_000950413.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 336716 337435 . - . ID=gene-CCO34_RS12640;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=CCO34_RS12640;old_locus_tag=CCO34_12635 NZ_NPMD01000004.1 Protein Homology CDS 336716 337435 . - 0 ID=cds-WP_000598637.1;Parent=gene-CCO34_RS12640;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=CCO34_RS12640;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 337432 339117 . - . ID=gene-CCO34_RS12645;Name=CCO34_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12645;old_locus_tag=CCO34_12640 NZ_NPMD01000004.1 Protein Homology CDS 337432 339117 . - 0 ID=cds-WP_000272848.1;Parent=gene-CCO34_RS12645;Dbxref=GenBank:WP_000272848.1;Name=WP_000272848.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=CCO34_RS12645;product=sensor histidine kinase;protein_id=WP_000272848.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 339340 340071 . + . ID=gene-CCO34_RS12650;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=CCO34_RS12650;old_locus_tag=CCO34_12645 NZ_NPMD01000004.1 Protein Homology CDS 339340 340071 . + 0 ID=cds-WP_001240418.1;Parent=gene-CCO34_RS12650;Dbxref=GenBank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=CCO34_RS12650;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 340131 340238 . + . ID=gene-CCO34_RS12655;Name=CCO34_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12655;old_locus_tag=CCO34_12650 NZ_NPMD01000004.1 Protein Homology CDS 340131 340238 . + 0 ID=cds-WP_001261696.1;Parent=gene-CCO34_RS12655;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=CCO34_RS12655;product=protein YohO;protein_id=WP_001261696.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 340219 340950 . - . ID=gene-CCO34_RS12660;Name=CCO34_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12660;old_locus_tag=CCO34_12655 NZ_NPMD01000004.1 Protein Homology CDS 340219 340950 . - 0 ID=cds-WP_000824855.1;Parent=gene-CCO34_RS12660;Dbxref=GenBank:WP_000824855.1;Name=WP_000824855.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=CCO34_RS12660;product=ABC transporter permease;protein_id=WP_000824855.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 340934 341881 . - . ID=gene-CCO34_RS12665;Name=CCO34_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12665;old_locus_tag=CCO34_12660 NZ_NPMD01000004.1 Protein Homology CDS 340934 341881 . - 0 ID=cds-WP_000569166.1;Parent=gene-CCO34_RS12665;Dbxref=GenBank:WP_000569166.1;Name=WP_000569166.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=CCO34_RS12665;product=ABC transporter ATP-binding protein;protein_id=WP_000569166.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 341874 343043 . - . ID=gene-CCO34_RS12670;Name=CCO34_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12670;old_locus_tag=CCO34_12665 NZ_NPMD01000004.1 Protein Homology CDS 341874 343043 . - 0 ID=cds-WP_023236970.1;Parent=gene-CCO34_RS12670;Dbxref=GenBank:WP_023236970.1;Name=WP_023236970.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=CCO34_RS12670;product=ABC transporter permease;protein_id=WP_023236970.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 343047 343964 . - . ID=gene-CCO34_RS12675;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=CCO34_RS12675;old_locus_tag=CCO34_12670 NZ_NPMD01000004.1 Protein Homology CDS 343047 343964 . - 0 ID=cds-WP_000155869.1;Parent=gene-CCO34_RS12675;Dbxref=GenBank:WP_000155869.1;Name=WP_000155869.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=CCO34_RS12675;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155869.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 344145 346442 . - . ID=gene-CCO34_RS12680;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=CCO34_RS12680;old_locus_tag=CCO34_12675 NZ_NPMD01000004.1 Protein Homology CDS 344145 346442 . - 0 ID=cds-WP_000871548.1;Parent=gene-CCO34_RS12680;Dbxref=GenBank:WP_000871548.1;Name=WP_000871548.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=CCO34_RS12680;product=beta-glucosidase BglX;protein_id=WP_000871548.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 346709 348439 . + . ID=gene-CCO34_RS12685;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=CCO34_RS12685;old_locus_tag=CCO34_12680 NZ_NPMD01000004.1 Protein Homology CDS 346709 348439 . + 0 ID=cds-WP_000095234.1;Parent=gene-CCO34_RS12685;Dbxref=GenBank:WP_000095234.1;Name=WP_000095234.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=CCO34_RS12685;product=D-lactate dehydrogenase;protein_id=WP_000095234.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 348497 349444 . - . ID=gene-CCO34_RS12690;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=CCO34_RS12690;old_locus_tag=CCO34_12685 NZ_NPMD01000004.1 Protein Homology CDS 348497 349444 . - 0 ID=cds-WP_000911555.1;Parent=gene-CCO34_RS12690;Dbxref=GenBank:WP_000911555.1;Name=WP_000911555.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=CCO34_RS12690;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911555.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 349610 350197 . - . ID=gene-CCO34_RS12700;Name=CCO34_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12700;old_locus_tag=CCO34_12695 NZ_NPMD01000004.1 Protein Homology CDS 349610 350197 . - 0 ID=cds-WP_001017057.1;Parent=gene-CCO34_RS12700;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=CCO34_RS12700;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 350356 350925 . + . ID=gene-CCO34_RS12705;Name=CCO34_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12705;old_locus_tag=CCO34_12700 NZ_NPMD01000004.1 Protein Homology CDS 350356 350925 . + 0 ID=cds-WP_001523476.1;Parent=gene-CCO34_RS12705;Dbxref=GenBank:WP_001523476.1;Name=WP_001523476.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=CCO34_RS12705;product=DedA family protein;protein_id=WP_001523476.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 350974 351735 . - . ID=gene-CCO34_RS12710;Name=CCO34_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12710;old_locus_tag=CCO34_12705 NZ_NPMD01000004.1 Protein Homology CDS 350974 351735 . - 0 ID=cds-WP_000169608.1;Parent=gene-CCO34_RS12710;Dbxref=GenBank:WP_000169608.1;Name=WP_000169608.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=CCO34_RS12710;product=SDR family oxidoreductase;protein_id=WP_000169608.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 351801 353237 . - . ID=gene-CCO34_RS12715;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=CCO34_RS12715;old_locus_tag=CCO34_12710 NZ_NPMD01000004.1 Protein Homology CDS 351801 353237 . - 0 ID=cds-WP_001081453.1;Parent=gene-CCO34_RS12715;Dbxref=GenBank:WP_001081453.1;Name=WP_001081453.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=CCO34_RS12715;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001081453.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 353555 353638 . + . ID=gene-CCO34_RS12720;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=CCO34_RS12720;old_locus_tag=CCO34_12715 NZ_NPMD01000004.1 Protein Homology CDS 353555 353638 . + 0 ID=cds-WP_000698460.1;Parent=gene-CCO34_RS12720;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=CCO34_RS12720;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 353696 354634 . - . ID=gene-CCO34_RS12725;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=CCO34_RS12725;old_locus_tag=CCO34_12720 NZ_NPMD01000004.1 Protein Homology CDS 353696 354634 . - 0 ID=cds-WP_023202765.1;Parent=gene-CCO34_RS12725;Dbxref=GenBank:WP_023202765.1;Name=WP_023202765.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=CCO34_RS12725;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_023202765.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 354743 355936 . - . ID=gene-CCO34_RS12730;Name=CCO34_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12730;old_locus_tag=CCO34_12725 NZ_NPMD01000004.1 Protein Homology CDS 354743 355936 . - 0 ID=cds-WP_000150113.1;Parent=gene-CCO34_RS12730;Dbxref=GenBank:WP_000150113.1;Name=WP_000150113.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=CCO34_RS12730;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150113.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 355951 356595 . - . ID=gene-CCO34_RS12735;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=CCO34_RS12735;old_locus_tag=CCO34_12730 NZ_NPMD01000004.1 Protein Homology CDS 355951 356595 . - 0 ID=cds-WP_000781183.1;Parent=gene-CCO34_RS12735;Dbxref=GenBank:WP_000781183.1;Name=WP_000781183.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=CCO34_RS12735;product=maleylacetoacetate isomerase;protein_id=WP_000781183.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 356604 357305 . - . ID=gene-CCO34_RS12740;Name=CCO34_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12740;old_locus_tag=CCO34_12735 NZ_NPMD01000004.1 Protein Homology CDS 356604 357305 . - 0 ID=cds-WP_000170621.1;Parent=gene-CCO34_RS12740;Dbxref=GenBank:WP_000170621.1;Name=WP_000170621.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=CCO34_RS12740;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170621.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 357321 358358 . - . ID=gene-CCO34_RS12745;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=CCO34_RS12745;old_locus_tag=CCO34_12740 NZ_NPMD01000004.1 Protein Homology CDS 357321 358358 . - 0 ID=cds-WP_001289857.1;Parent=gene-CCO34_RS12745;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=CCO34_RS12745;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 358370 359728 . - . ID=gene-CCO34_RS12750;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=CCO34_RS12750;old_locus_tag=CCO34_12745 NZ_NPMD01000004.1 Protein Homology CDS 358370 359728 . - 0 ID=cds-WP_000194218.1;Parent=gene-CCO34_RS12750;Dbxref=GenBank:WP_000194218.1;Name=WP_000194218.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=CCO34_RS12750;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_000194218.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 359854 360762 . + . ID=gene-CCO34_RS12755;Name=CCO34_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12755;old_locus_tag=CCO34_12750 NZ_NPMD01000004.1 Protein Homology CDS 359854 360762 . + 0 ID=cds-WP_000024658.1;Parent=gene-CCO34_RS12755;Dbxref=GenBank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=CCO34_RS12755;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024658.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 360894 361292 . + . ID=gene-CCO34_RS12760;Name=CCO34_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12760;old_locus_tag=CCO34_12755 NZ_NPMD01000004.1 Protein Homology CDS 360894 361292 . + 0 ID=cds-WP_000045719.1;Parent=gene-CCO34_RS12760;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=CCO34_RS12760;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 361289 361984 . + . ID=gene-CCO34_RS12765;Name=CCO34_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12765;old_locus_tag=CCO34_12760 NZ_NPMD01000004.1 Protein Homology CDS 361289 361984 . + 0 ID=cds-WP_000989296.1;Parent=gene-CCO34_RS12765;Dbxref=GenBank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=CCO34_RS12765;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 362138 363022 . + . ID=gene-CCO34_RS12770;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CCO34_RS12770;old_locus_tag=CCO34_12765 NZ_NPMD01000004.1 Protein Homology CDS 362138 363022 . + 0 ID=cds-WP_000553526.1;Parent=gene-CCO34_RS12770;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=CCO34_RS12770;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 363199 363918 . + . ID=gene-CCO34_RS12775;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=CCO34_RS12775;old_locus_tag=CCO34_12770 NZ_NPMD01000004.1 Protein Homology CDS 363199 363918 . + 0 ID=cds-WP_000920081.1;Parent=gene-CCO34_RS12775;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=CCO34_RS12775;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 363915 364160 . + . ID=gene-CCO34_RS12780;Name=CCO34_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12780;old_locus_tag=CCO34_12775 NZ_NPMD01000004.1 Protein Homology CDS 363915 364160 . + 0 ID=cds-WP_000605187.1;Parent=gene-CCO34_RS12780;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=CCO34_RS12780;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 364365 365606 . + . ID=gene-CCO34_RS12785;Name=CCO34_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12785;old_locus_tag=CCO34_12780 NZ_NPMD01000004.1 Protein Homology CDS 364365 365606 . + 0 ID=cds-WP_001136424.1;Parent=gene-CCO34_RS12785;Dbxref=GenBank:WP_001136424.1;Name=WP_001136424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=CCO34_RS12785;product=NAD(P)-dependent oxidoreductase;protein_id=WP_001136424.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 365600 366835 . + . ID=gene-CCO34_RS12790;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=CCO34_RS12790;old_locus_tag=CCO34_12785 NZ_NPMD01000004.1 Protein Homology CDS 365600 366835 . + 0 ID=cds-WP_000956095.1;Parent=gene-CCO34_RS12790;Dbxref=GenBank:WP_000956095.1;Name=WP_000956095.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=CCO34_RS12790;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956095.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 366910 367920 . - . ID=gene-CCO34_RS12795;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=CCO34_RS12795;old_locus_tag=CCO34_12790 NZ_NPMD01000004.1 Protein Homology CDS 366910 367920 . - 0 ID=cds-WP_001275101.1;Parent=gene-CCO34_RS12795;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=CCO34_RS12795;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 367936 369456 . - . ID=gene-CCO34_RS12800;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=CCO34_RS12800;old_locus_tag=CCO34_12795 NZ_NPMD01000004.1 Protein Homology CDS 367936 369456 . - 0 ID=cds-WP_000535908.1;Parent=gene-CCO34_RS12800;Dbxref=GenBank:WP_000535908.1;Name=WP_000535908.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461134.1;locus_tag=CCO34_RS12800;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000535908.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 369590 370588 . - . ID=gene-CCO34_RS12805;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=CCO34_RS12805;old_locus_tag=CCO34_12800 NZ_NPMD01000004.1 Protein Homology CDS 369590 370588 . - 0 ID=cds-WP_001036938.1;Parent=gene-CCO34_RS12805;Dbxref=GenBank:WP_001036938.1;Name=WP_001036938.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=CCO34_RS12805;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036938.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 371087 372109 . - . ID=gene-CCO34_RS12810;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=CCO34_RS12810;old_locus_tag=CCO34_12805 NZ_NPMD01000004.1 Protein Homology CDS 371087 372109 . - 0 ID=cds-WP_000628634.1;Parent=gene-CCO34_RS12810;Dbxref=GenBank:WP_000628634.1;Name=WP_000628634.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=CCO34_RS12810;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628634.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 372259 373401 . - . ID=gene-CCO34_RS12815;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=CCO34_RS12815;old_locus_tag=CCO34_12810 NZ_NPMD01000004.1 Protein Homology CDS 372259 373401 . - 0 ID=cds-WP_001535159.1;Parent=gene-CCO34_RS12815;Dbxref=GenBank:WP_001535159.1;Name=WP_001535159.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=CCO34_RS12815;product=DUF418 domain-containing protein YeiB;protein_id=WP_001535159.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 373416 374084 . - . ID=gene-CCO34_RS12820;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=CCO34_RS12820;old_locus_tag=CCO34_12815 NZ_NPMD01000004.1 Protein Homology CDS 373416 374084 . - 0 ID=cds-WP_001139611.1;Parent=gene-CCO34_RS12820;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=CCO34_RS12820;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 374414 375271 . + . ID=gene-CCO34_RS12830;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=CCO34_RS12830;old_locus_tag=CCO34_12825 NZ_NPMD01000004.1 Protein Homology CDS 374414 375271 . + 0 ID=cds-WP_000425488.1;Parent=gene-CCO34_RS12830;Dbxref=GenBank:WP_000425488.1;Name=WP_000425488.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=CCO34_RS12830;product=S-formylglutathione hydrolase;protein_id=WP_000425488.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 375260 375649 . - . ID=gene-CCO34_RS12835;Name=CCO34_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12835;old_locus_tag=CCO34_12830 NZ_NPMD01000004.1 Protein Homology CDS 375260 375649 . - 0 ID=cds-WP_000876817.1;Parent=gene-CCO34_RS12835;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=CCO34_RS12835;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 375654 377021 . - . ID=gene-CCO34_RS12840;Name=CCO34_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12840;old_locus_tag=CCO34_12835 NZ_NPMD01000004.1 Protein Homology CDS 375654 377021 . - 0 ID=cds-WP_001736633.1;Parent=gene-CCO34_RS12840;Dbxref=GenBank:WP_001736633.1;Name=WP_001736633.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=CCO34_RS12840;product=L-serine ammonia-lyase;protein_id=WP_001736633.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 377238 378125 . + . ID=gene-CCO34_RS12845;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO34_RS12845;old_locus_tag=CCO34_12840 NZ_NPMD01000004.1 Protein Homology CDS 377238 378125 . + 0 ID=cds-WP_000022902.1;Parent=gene-CCO34_RS12845;Dbxref=GenBank:WP_000022902.1;Name=WP_000022902.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=CCO34_RS12845;product=phosphoserine phosphatase SerB;protein_id=WP_000022902.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 378158 379480 . + . ID=gene-CCO34_RS12850;Name=CCO34_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12850;old_locus_tag=CCO34_12845 NZ_NPMD01000004.1 Protein Homology CDS 378158 379480 . + 0 ID=cds-WP_000023807.1;Parent=gene-CCO34_RS12850;Dbxref=GenBank:WP_000023807.1;Name=WP_000023807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=CCO34_RS12850;product=MFS transporter;protein_id=WP_000023807.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 379524 381515 . - . ID=gene-CCO34_RS12855;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=CCO34_RS12855;old_locus_tag=CCO34_12850 NZ_NPMD01000004.1 Protein Homology CDS 379524 381515 . - 0 ID=cds-WP_000488252.1;Parent=gene-CCO34_RS12855;Dbxref=GenBank:WP_000488252.1;Name=WP_000488252.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=CCO34_RS12855;product=catecholate siderophore receptor CirA;protein_id=WP_000488252.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 381861 383330 . - . ID=gene-CCO34_RS12860;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=CCO34_RS12860;old_locus_tag=CCO34_12855 NZ_NPMD01000004.1 Protein Homology CDS 381861 383330 . - 0 ID=cds-WP_000535000.1;Parent=gene-CCO34_RS12860;Dbxref=GenBank:WP_000535000.1;Name=WP_000535000.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=CCO34_RS12860;product=lysine-specific permease;protein_id=WP_000535000.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 383520 384383 . - . ID=gene-CCO34_RS12865;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=CCO34_RS12865;old_locus_tag=CCO34_12860 NZ_NPMD01000004.1 Protein Homology CDS 383520 384383 . - 0 ID=cds-WP_000548314.1;Parent=gene-CCO34_RS12865;Dbxref=GenBank:WP_000548314.1;Name=WP_000548314.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=CCO34_RS12865;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548314.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 384504 385553 . + . ID=gene-CCO34_RS12870;Name=CCO34_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12870;old_locus_tag=CCO34_12865 NZ_NPMD01000004.1 Protein Homology CDS 384504 385553 . + 0 ID=cds-WP_000137966.1;Parent=gene-CCO34_RS12870;Dbxref=GenBank:WP_000137966.1;Name=WP_000137966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=CCO34_RS12870;product=YeiH family protein;protein_id=WP_000137966.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 385632 386489 . + . ID=gene-CCO34_RS12875;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=CCO34_RS12875;old_locus_tag=CCO34_12870 NZ_NPMD01000004.1 Protein Homology CDS 385632 386489 . + 0 ID=cds-WP_000873909.1;Parent=gene-CCO34_RS12875;Dbxref=GenBank:WP_000873909.1;Name=WP_000873909.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=CCO34_RS12875;product=deoxyribonuclease IV;protein_id=WP_000873909.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 386554 388242 . - . ID=gene-CCO34_RS12880;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=CCO34_RS12880;old_locus_tag=CCO34_12875 NZ_NPMD01000004.1 Protein Homology CDS 386554 388242 . - 0 ID=cds-WP_000854396.1;Parent=gene-CCO34_RS12880;Dbxref=GenBank:WP_000854396.1;Name=WP_000854396.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=CCO34_RS12880;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854396.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 388259 389197 . - . ID=gene-CCO34_RS12885;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=CCO34_RS12885;old_locus_tag=CCO34_12880 NZ_NPMD01000004.1 Protein Homology CDS 388259 389197 . - 0 ID=cds-WP_000091249.1;Parent=gene-CCO34_RS12885;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=CCO34_RS12885;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 389197 390327 . - . ID=gene-CCO34_RS12890;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=CCO34_RS12890;old_locus_tag=CCO34_12885 NZ_NPMD01000004.1 Protein Homology CDS 389197 390327 . - 0 ID=cds-WP_000487287.1;Parent=gene-CCO34_RS12890;Dbxref=GenBank:WP_000487287.1;Name=WP_000487287.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=CCO34_RS12890;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487287.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 390696 391877 . + . ID=gene-CCO34_RS12895;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=CCO34_RS12895;old_locus_tag=CCO34_12890 NZ_NPMD01000004.1 Protein Homology CDS 390696 391877 . + 0 ID=cds-WP_000551934.1;Parent=gene-CCO34_RS12895;Dbxref=GenBank:WP_000551934.1;Name=WP_000551934.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=CCO34_RS12895;product=sugar efflux transporter SetB;protein_id=WP_000551934.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 391942 392607 . - . ID=gene-CCO34_RS12900;Name=CCO34_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12900;old_locus_tag=CCO34_12895 NZ_NPMD01000004.1 Protein Homology CDS 391942 392607 . - 0 ID=cds-WP_001213899.1;Parent=gene-CCO34_RS12900;Dbxref=GenBank:WP_001213899.1;Name=WP_001213899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=CCO34_RS12900;product=GNVR domain-containing protein;protein_id=WP_001213899.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 392609 392731 . - . ID=gene-CCO34_RS12905;Name=CCO34_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12905;old_locus_tag=CCO34_12900 NZ_NPMD01000004.1 Protein Homology CDS 392609 392731 . - 0 ID=cds-WP_001519564.1;Parent=gene-CCO34_RS12905;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=CCO34_RS12905;product=membrane protein;protein_id=WP_001519564.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 393119 393373 . - . ID=gene-CCO34_RS12910;Name=CCO34_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12910;old_locus_tag=CCO34_12905 NZ_NPMD01000004.1 Protein Homology CDS 393119 393373 . - 0 ID=cds-WP_001523448.1;Parent=gene-CCO34_RS12910;Dbxref=GenBank:WP_001523448.1;Name=WP_001523448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=CCO34_RS12910;product=YkgJ family cysteine cluster protein;protein_id=WP_001523448.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 393697 394269 . + . ID=gene-CCO34_RS12915;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=CCO34_RS12915;old_locus_tag=CCO34_12910 NZ_NPMD01000004.1 Protein Homology CDS 393697 394269 . + 0 ID=cds-WP_001136822.1;Parent=gene-CCO34_RS12915;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=CCO34_RS12915;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 394481 395467 . + . ID=gene-CCO34_RS12920;Name=CCO34_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12920;old_locus_tag=CCO34_12915 NZ_NPMD01000004.1 Protein Homology CDS 394481 395467 . + 0 ID=cds-WP_000169350.1;Parent=gene-CCO34_RS12920;Dbxref=GenBank:WP_000169350.1;Name=WP_000169350.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=CCO34_RS12920;product=CobW family GTP-binding protein;protein_id=WP_000169350.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 395497 396216 . + . ID=gene-CCO34_RS12925;Name=CCO34_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12925;old_locus_tag=CCO34_12920 NZ_NPMD01000004.1 Protein Homology CDS 395497 396216 . + 0 ID=cds-WP_000178096.1;Parent=gene-CCO34_RS12925;Dbxref=GenBank:WP_000178096.1;Name=WP_000178096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=CCO34_RS12925;product=phosphatase PAP2 family protein;protein_id=WP_000178096.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 396630 397202 . + . ID=gene-CCO34_RS12935;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=CCO34_RS12935;old_locus_tag=CCO34_12930 NZ_NPMD01000004.1 Protein Homology CDS 396630 397202 . + 0 ID=cds-WP_000241015.1;Parent=gene-CCO34_RS12935;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=CCO34_RS12935;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 397576 399132 . + . ID=gene-CCO34_RS12940;Name=CCO34_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12940;old_locus_tag=CCO34_12935 NZ_NPMD01000004.1 Protein Homology CDS 397576 399132 . + 0 ID=cds-WP_000957742.1;Parent=gene-CCO34_RS12940;Dbxref=GenBank:WP_000957742.1;Name=WP_000957742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=CCO34_RS12940;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000957742.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 399239 401044 . + . ID=gene-CCO34_RS12945;Name=CCO34_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12945;old_locus_tag=CCO34_12940 NZ_NPMD01000004.1 Protein Homology CDS 399239 401044 . + 0 ID=cds-WP_000561742.1;Parent=gene-CCO34_RS12945;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=CCO34_RS12945;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 401054 402148 . + . ID=gene-CCO34_RS12950;Name=CCO34_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12950;old_locus_tag=CCO34_12945 NZ_NPMD01000004.1 Protein Homology CDS 401054 402148 . + 0 ID=cds-WP_000501623.1;Parent=gene-CCO34_RS12950;Dbxref=GenBank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=CCO34_RS12950;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 402148 403173 . + . ID=gene-CCO34_RS12955;Name=CCO34_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12955;old_locus_tag=CCO34_12950 NZ_NPMD01000004.1 Protein Homology CDS 402148 403173 . + 0 ID=cds-WP_001137761.1;Parent=gene-CCO34_RS12955;Dbxref=GenBank:WP_001137761.1;Name=WP_001137761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=CCO34_RS12955;product=ABC transporter permease;protein_id=WP_001137761.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 403175 404764 . + . ID=gene-CCO34_RS12960;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=CCO34_RS12960;old_locus_tag=CCO34_12955 NZ_NPMD01000004.1 Protein Homology CDS 403175 404764 . + 0 ID=cds-WP_000203612.1;Parent=gene-CCO34_RS12960;Dbxref=GenBank:WP_000203612.1;Name=WP_000203612.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=CCO34_RS12960;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000203612.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 404768 405112 . - . ID=gene-CCO34_RS12965;Name=CCO34_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12965;old_locus_tag=CCO34_12960 NZ_NPMD01000004.1 Protein Homology CDS 404768 405112 . - 0 ID=cds-WP_001094639.1;Parent=gene-CCO34_RS12965;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=CCO34_RS12965;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 405503 406693 . - . ID=gene-CCO34_RS12975;Name=CCO34_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12975;old_locus_tag=CCO34_12970 NZ_NPMD01000004.1 Protein Homology CDS 405503 406693 . - 0 ID=cds-WP_000213347.1;Parent=gene-CCO34_RS12975;Dbxref=GenBank:WP_000213347.1;Name=WP_000213347.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=CCO34_RS12975;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213347.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 406721 407416 . - . ID=gene-CCO34_RS12980;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=CCO34_RS12980;old_locus_tag=CCO34_12975 NZ_NPMD01000004.1 Protein Homology CDS 406721 407416 . - 0 ID=cds-WP_001234835.1;Parent=gene-CCO34_RS12980;Dbxref=GenBank:WP_001234835.1;Name=WP_001234835.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=CCO34_RS12980;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234835.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 407568 409328 . + . ID=gene-CCO34_RS12985;Name=CCO34_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12985;old_locus_tag=CCO34_12980 NZ_NPMD01000004.1 Protein Homology CDS 407568 409328 . + 0 ID=cds-WP_000578113.1;Parent=gene-CCO34_RS12985;Dbxref=GenBank:WP_000578113.1;Name=WP_000578113.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=CCO34_RS12985;product=DEAD/DEAH box helicase;protein_id=WP_000578113.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 409453 409737 . + . ID=gene-CCO34_RS12990;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=CCO34_RS12990;old_locus_tag=CCO34_12985 NZ_NPMD01000004.1 Protein Homology CDS 409453 409737 . + 0 ID=cds-WP_000494192.1;Parent=gene-CCO34_RS12990;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=CCO34_RS12990;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 409846 410466 . - . ID=gene-CCO34_RS12995;Name=CCO34_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS12995;old_locus_tag=CCO34_12990 NZ_NPMD01000004.1 Protein Homology CDS 409846 410466 . - 0 ID=cds-WP_000033436.1;Parent=gene-CCO34_RS12995;Dbxref=GenBank:WP_000033436.1;Name=WP_000033436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=CCO34_RS12995;product=hypothetical protein;protein_id=WP_000033436.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 410494 411501 . - . ID=gene-CCO34_RS13000;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=CCO34_RS13000;old_locus_tag=CCO34_12995 NZ_NPMD01000004.1 Protein Homology CDS 410494 411501 . - 0 ID=cds-WP_000050806.1;Parent=gene-CCO34_RS13000;Dbxref=GenBank:WP_000050806.1;Name=WP_000050806.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=CCO34_RS13000;product=nucleoid-associated protein YejK;protein_id=WP_000050806.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 411681 411908 . + . ID=gene-CCO34_RS13005;Name=CCO34_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13005;old_locus_tag=CCO34_13000 NZ_NPMD01000004.1 Protein Homology CDS 411681 411908 . + 0 ID=cds-WP_001135904.1;Parent=gene-CCO34_RS13005;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=CCO34_RS13005;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 411940 413700 . + . ID=gene-CCO34_RS13010;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=CCO34_RS13010;old_locus_tag=CCO34_13005 NZ_NPMD01000004.1 Protein Homology CDS 411940 413700 . + 0 ID=cds-WP_000256153.1;Parent=gene-CCO34_RS13010;Dbxref=GenBank:WP_000256153.1;Name=WP_000256153.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=CCO34_RS13010;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256153.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 413774 413850 . + . ID=gene-CCO34_RS13015;Name=CCO34_RS13015;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS13015;old_locus_tag=CCO34_13010 NZ_NPMD01000004.1 tRNAscan-SE tRNA 413774 413850 . + . ID=rna-CCO34_RS13015;Parent=gene-CCO34_RS13015;anticodon=(pos:413808..413810);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13015;product=tRNA-Pro NZ_NPMD01000004.1 tRNAscan-SE exon 413774 413850 . + . ID=exon-CCO34_RS13015-1;Parent=rna-CCO34_RS13015;anticodon=(pos:413808..413810);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13015;product=tRNA-Pro NZ_NPMD01000004.1 RefSeq pseudogene 414161 414383 . - . ID=gene-CCO34_RS13020;Name=CCO34_RS13020;end_range=414383,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS13020;old_locus_tag=CCO34_13015;partial=true;pseudo=true NZ_NPMD01000004.1 Protein Homology CDS 414161 414383 . - 0 ID=cds-CCO34_RS13020;Parent=gene-CCO34_RS13020;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=414383,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO34_RS13020;partial=true;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 414471 416837 . - . ID=gene-CCO34_RS13030;Name=sspH2;gbkey=Gene;gene=sspH2;gene_biotype=protein_coding;locus_tag=CCO34_RS13030;old_locus_tag=CCO34_13025 NZ_NPMD01000004.1 Protein Homology CDS 414471 416837 . - 0 ID=cds-WP_023228915.1;Parent=gene-CCO34_RS13030;Dbxref=GenBank:WP_023228915.1;Name=WP_023228915.1;gbkey=CDS;gene=sspH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=CCO34_RS13030;product=SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2;protein_id=WP_023228915.1;transl_table=11 NZ_NPMD01000004.1 RefSeq pseudogene 417091 417423 . - . ID=gene-CCO34_RS13040;Name=CCO34_RS13040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS13040;old_locus_tag=CCO34_13035;partial=true;pseudo=true;start_range=.,417091 NZ_NPMD01000004.1 Protein Homology CDS 417091 417423 . - 0 ID=cds-CCO34_RS13040;Parent=gene-CCO34_RS13040;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179595.1;locus_tag=CCO34_RS13040;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,417091;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 417507 417791 . - . ID=gene-CCO34_RS26200;Name=CCO34_RS26200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26200 NZ_NPMD01000004.1 GeneMarkS-2+ CDS 417507 417791 . - 0 ID=cds-WP_001252690.1;Parent=gene-CCO34_RS26200;Dbxref=GenBank:WP_001252690.1;Name=WP_001252690.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS26200;product=hypothetical protein;protein_id=WP_001252690.1;transl_table=11 NZ_NPMD01000004.1 RefSeq pseudogene 417774 418454 . - . ID=gene-CCO34_RS26205;Name=CCO34_RS26205;end_range=418454,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26205;partial=true;pseudo=true;start_range=.,417774 NZ_NPMD01000004.1 Protein Homology CDS 417774 418454 . - 0 ID=cds-CCO34_RS26205;Parent=gene-CCO34_RS26205;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=418454,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264264.1;locus_tag=CCO34_RS26205;partial=true;product=phage tail protein;pseudo=true;start_range=.,417774;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 418414 418572 . + . ID=gene-CCO34_RS25560;Name=CCO34_RS25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25560 NZ_NPMD01000004.1 GeneMarkS-2+ CDS 418414 418572 . + 0 ID=cds-WP_001749124.1;Parent=gene-CCO34_RS25560;Dbxref=GenBank:WP_001749124.1;Name=WP_001749124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25560;product=hypothetical protein;protein_id=WP_001749124.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 418601 418804 . + . ID=gene-CCO34_RS13055;Name=CCO34_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13055;old_locus_tag=CCO34_13050 NZ_NPMD01000004.1 Protein Homology CDS 418601 418804 . + 0 ID=cds-WP_001653202.1;Parent=gene-CCO34_RS13055;Dbxref=GenBank:WP_001653202.1;Name=WP_001653202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=CCO34_RS13055;product=virulence protein MsgA;protein_id=WP_001653202.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 418996 419559 . - . ID=gene-CCO34_RS13060;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=CCO34_RS13060;old_locus_tag=CCO34_13055 NZ_NPMD01000004.1 Protein Homology CDS 418996 419559 . - 0 ID=cds-WP_000281877.1;Parent=gene-CCO34_RS13060;Dbxref=GenBank:WP_000281877.1;Name=WP_000281877.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=CCO34_RS13060;product=lipid A 3-O-deacylase PagL;protein_id=WP_000281877.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 420289 420936 . + . ID=gene-CCO34_RS13070;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=CCO34_RS13070;old_locus_tag=CCO34_13065 NZ_NPMD01000004.1 Protein Homology CDS 420289 420936 . + 0 ID=cds-WP_001115498.1;Parent=gene-CCO34_RS13070;Dbxref=GenBank:WP_001115498.1;Name=WP_001115498.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=CCO34_RS13070;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115498.1;transl_table=11 NZ_NPMD01000004.1 RefSeq gene 420980 421503 . - . ID=gene-CCO34_RS13075;Name=CCO34_RS13075;end_range=421503,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13075;old_locus_tag=CCO34_13070;partial=true NZ_NPMD01000004.1 Protein Homology CDS 420980 421503 . - 2 ID=cds-WP_140428475.1;Parent=gene-CCO34_RS13075;Dbxref=GenBank:WP_140428475.1;Name=WP_140428475.1;Ontology_term=GO:0005515;end_range=421503,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=CCO34_RS13075;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_140428475.1;transl_table=11 ##sequence-region NZ_NPMD01000040.1 1 580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000040.1 RefSeq region 1 580 . + . ID=NZ_NPMD01000040.1:1..580;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000040.1 RefSeq pseudogene 1 580 . - . ID=gene-CCO34_RS25665;Name=CCO34_RS25665;end_range=580,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25665;old_locus_tag=CCO34_25180;partial=true;pseudo=true;start_range=.,1 NZ_NPMD01000040.1 Protein Homology CDS 1 580 . - 0 ID=cds-CCO34_RS25665;Parent=gene-CCO34_RS25665;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=580,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001132885.1;locus_tag=CCO34_RS25665;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_NPMD01000041.1 1 580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000041.1 RefSeq region 1 580 . + . ID=NZ_NPMD01000041.1:1..580;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000041.1 RefSeq pseudogene 1 580 . - . ID=gene-CCO34_RS25670;Name=CCO34_RS25670;end_range=580,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25670;old_locus_tag=CCO34_25185;partial=true;pseudo=true;start_range=.,1 NZ_NPMD01000041.1 Protein Homology CDS 1 580 . - 0 ID=cds-CCO34_RS25670;Parent=gene-CCO34_RS25670;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=580,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001132885.1;locus_tag=CCO34_RS25670;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_NPMD01000042.1 1 578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000042.1 RefSeq region 1 578 . + . ID=NZ_NPMD01000042.1:1..578;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000042.1 RefSeq gene 47 122 . + . ID=gene-CCO34_RS25205;Name=CCO34_RS25205;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS25205;old_locus_tag=CCO34_25190 NZ_NPMD01000042.1 tRNAscan-SE tRNA 47 122 . + . ID=rna-CCO34_RS25205;Parent=gene-CCO34_RS25205;anticodon=(pos:81..83);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25205;product=tRNA-Glu NZ_NPMD01000042.1 tRNAscan-SE exon 47 122 . + . ID=exon-CCO34_RS25205-1;Parent=rna-CCO34_RS25205;anticodon=(pos:81..83);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS25205;product=tRNA-Glu NZ_NPMD01000042.1 RefSeq gene 314 578 . + . ID=gene-CCO34_RS25210;Name=CCO34_RS25210;end_range=578,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO34_RS25210;old_locus_tag=CCO34_25195;partial=true NZ_NPMD01000042.1 cmsearch rRNA 314 578 . + . ID=rna-CCO34_RS25210;Parent=gene-CCO34_RS25210;Dbxref=RFAM:RF02541;end_range=578,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25210;partial=true;product=23S ribosomal RNA NZ_NPMD01000042.1 cmsearch exon 314 578 . + . ID=exon-CCO34_RS25210-1;Parent=rna-CCO34_RS25210;Dbxref=RFAM:RF02541;end_range=578,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25210;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPMD01000043.1 1 523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000043.1 RefSeq region 1 523 . + . ID=NZ_NPMD01000043.1:1..523;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000043.1 RefSeq gene 1 523 . - . ID=gene-CCO34_RS25215;Name=CCO34_RS25215;end_range=523,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO34_RS25215;old_locus_tag=CCO34_25200;partial=true;start_range=.,1 NZ_NPMD01000043.1 cmsearch rRNA 1 523 . - . ID=rna-CCO34_RS25215;Parent=gene-CCO34_RS25215;Dbxref=RFAM:RF02541;end_range=523,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25215;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMD01000043.1 cmsearch exon 1 523 . - . ID=exon-CCO34_RS25215-1;Parent=rna-CCO34_RS25215;Dbxref=RFAM:RF02541;end_range=523,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS25215;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPMD01000005.1 1 354479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000005.1 RefSeq region 1 354479 . + . ID=NZ_NPMD01000005.1:1..354479;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000005.1 RefSeq gene 728 2158 . + . ID=gene-CCO34_RS13080;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=CCO34_RS13080;old_locus_tag=CCO34_13075 NZ_NPMD01000005.1 Protein Homology CDS 728 2158 . + 0 ID=cds-WP_001676035.1;Parent=gene-CCO34_RS13080;Dbxref=GenBank:WP_001676035.1;Name=WP_001676035.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=CCO34_RS13080;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001676035.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 2160 2924 . + . ID=gene-CCO34_RS13085;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=CCO34_RS13085;old_locus_tag=CCO34_13080 NZ_NPMD01000005.1 Protein Homology CDS 2160 2924 . + 0 ID=cds-WP_001054239.1;Parent=gene-CCO34_RS13085;Dbxref=GenBank:WP_001054239.1;Name=WP_001054239.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=CCO34_RS13085;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001054239.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 2924 4258 . + . ID=gene-CCO34_RS13090;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=CCO34_RS13090;old_locus_tag=CCO34_13085 NZ_NPMD01000005.1 Protein Homology CDS 2924 4258 . + 0 ID=cds-WP_024131115.1;Parent=gene-CCO34_RS13090;Dbxref=GenBank:WP_024131115.1;Name=WP_024131115.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=CCO34_RS13090;product=two-component system response regulator GlrR;protein_id=WP_024131115.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 4335 4673 . + . ID=gene-CCO34_RS13095;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=CCO34_RS13095;old_locus_tag=CCO34_13090 NZ_NPMD01000005.1 Protein Homology CDS 4335 4673 . + 0 ID=cds-WP_000717694.1;Parent=gene-CCO34_RS13095;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=CCO34_RS13095;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 4722 6182 . - . ID=gene-CCO34_RS13100;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=CCO34_RS13100;old_locus_tag=CCO34_13095 NZ_NPMD01000005.1 Protein Homology CDS 4722 6182 . - 0 ID=cds-WP_000856793.1;Parent=gene-CCO34_RS13100;Dbxref=GenBank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=CCO34_RS13100;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 6238 8382 . - . ID=gene-CCO34_RS13105;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=CCO34_RS13105;old_locus_tag=CCO34_13100 NZ_NPMD01000005.1 Protein Homology CDS 6238 8382 . - 0 ID=cds-WP_001100657.1;Parent=gene-CCO34_RS13105;Dbxref=GenBank:WP_001100657.1;Name=WP_001100657.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=CCO34_RS13105;product=lysine decarboxylase CadA;protein_id=WP_001100657.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 8465 9796 . - . ID=gene-CCO34_RS13110;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=CCO34_RS13110;old_locus_tag=CCO34_13105 NZ_NPMD01000005.1 Protein Homology CDS 8465 9796 . - 0 ID=cds-WP_000100008.1;Parent=gene-CCO34_RS13110;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=CCO34_RS13110;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 10157 11701 . - . ID=gene-CCO34_RS13115;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=CCO34_RS13115;old_locus_tag=CCO34_13110 NZ_NPMD01000005.1 Protein Homology CDS 10157 11701 . - 0 ID=cds-WP_001187144.1;Parent=gene-CCO34_RS13115;Dbxref=GenBank:WP_001187144.1;Name=WP_001187144.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=CCO34_RS13115;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187144.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 11883 13073 . - . ID=gene-CCO34_RS13120;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=CCO34_RS13120;old_locus_tag=CCO34_13115 NZ_NPMD01000005.1 Protein Homology CDS 11883 13073 . - 0 ID=cds-WP_000883089.1;Parent=gene-CCO34_RS13120;Dbxref=GenBank:WP_000883089.1;Name=WP_000883089.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=CCO34_RS13120;product=NO-inducible flavohemoprotein;protein_id=WP_000883089.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 13398 14651 . + . ID=gene-CCO34_RS13125;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CCO34_RS13125;old_locus_tag=CCO34_13120 NZ_NPMD01000005.1 Protein Homology CDS 13398 14651 . + 0 ID=cds-WP_000919178.1;Parent=gene-CCO34_RS13125;Dbxref=GenBank:WP_000919178.1;Name=WP_000919178.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=CCO34_RS13125;product=serine hydroxymethyltransferase;protein_id=WP_000919178.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 14847 15986 . + . ID=gene-CCO34_RS13130;Name=CCO34_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13130;old_locus_tag=CCO34_13125 NZ_NPMD01000005.1 Protein Homology CDS 14847 15986 . + 0 ID=cds-WP_001173729.1;Parent=gene-CCO34_RS13130;Dbxref=GenBank:WP_001173729.1;Name=WP_001173729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=CCO34_RS13130;product=3-phenylpropionate MFS transporter;protein_id=WP_001173729.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 15981 17258 . - . ID=gene-CCO34_RS13135;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=CCO34_RS13135;old_locus_tag=CCO34_13130 NZ_NPMD01000005.1 Protein Homology CDS 15981 17258 . - 0 ID=cds-WP_080181021.1;Parent=gene-CCO34_RS13135;Dbxref=GenBank:WP_080181021.1;Name=WP_080181021.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=CCO34_RS13135;product=stationary phase inducible protein CsiE;protein_id=WP_080181021.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 17384 18022 . + . ID=gene-CCO34_RS13140;Name=CCO34_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13140;old_locus_tag=CCO34_13135 NZ_NPMD01000005.1 Protein Homology CDS 17384 18022 . + 0 ID=cds-WP_001653455.1;Parent=gene-CCO34_RS13140;Dbxref=GenBank:WP_001653455.1;Name=WP_001653455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=CCO34_RS13140;product=DUF1007 family protein;protein_id=WP_001653455.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 18013 18999 . + . ID=gene-CCO34_RS13145;Name=CCO34_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13145;old_locus_tag=CCO34_13140 NZ_NPMD01000005.1 Protein Homology CDS 18013 18999 . + 0 ID=cds-WP_000111003.1;Parent=gene-CCO34_RS13145;Dbxref=GenBank:WP_000111003.1;Name=WP_000111003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=CCO34_RS13145;product=nickel/cobalt transporter;protein_id=WP_000111003.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 19000 20013 . - . ID=gene-CCO34_RS13150;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=CCO34_RS13150;old_locus_tag=CCO34_13145 NZ_NPMD01000005.1 Protein Homology CDS 19000 20013 . - 0 ID=cds-WP_000020689.1;Parent=gene-CCO34_RS13150;Dbxref=GenBank:WP_000020689.1;Name=WP_000020689.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=CCO34_RS13150;product=sulfite reductase subunit C;protein_id=WP_000020689.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 20024 20842 . - . ID=gene-CCO34_RS13155;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=CCO34_RS13155;old_locus_tag=CCO34_13150 NZ_NPMD01000005.1 Protein Homology CDS 20024 20842 . - 0 ID=cds-WP_000017587.1;Parent=gene-CCO34_RS13155;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=CCO34_RS13155;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 20846 21889 . - . ID=gene-CCO34_RS13160;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=CCO34_RS13160;old_locus_tag=CCO34_13155 NZ_NPMD01000005.1 Protein Homology CDS 20846 21889 . - 0 ID=cds-WP_000985209.1;Parent=gene-CCO34_RS13160;Dbxref=GenBank:WP_000985209.1;Name=WP_000985209.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=CCO34_RS13160;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985209.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 22071 22949 . - . ID=gene-CCO34_RS13165;Name=CCO34_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13165;old_locus_tag=CCO34_13160 NZ_NPMD01000005.1 Protein Homology CDS 22071 22949 . - 0 ID=cds-WP_000174939.1;Parent=gene-CCO34_RS13165;Dbxref=GenBank:WP_000174939.1;Name=WP_000174939.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=CCO34_RS13165;product=alpha/beta hydrolase;protein_id=WP_000174939.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 23094 23897 . - . ID=gene-CCO34_RS13170;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=CCO34_RS13170;old_locus_tag=CCO34_13165 NZ_NPMD01000005.1 Protein Homology CDS 23094 23897 . - 0 ID=cds-WP_000553467.1;Parent=gene-CCO34_RS13170;Dbxref=GenBank:WP_000553467.1;Name=WP_000553467.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=CCO34_RS13170;product=inositol-1-monophosphatase;protein_id=WP_000553467.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 24016 24747 . + . ID=gene-CCO34_RS13175;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=CCO34_RS13175;old_locus_tag=CCO34_13170 NZ_NPMD01000005.1 Protein Homology CDS 24016 24747 . + 0 ID=cds-WP_000940032.1;Parent=gene-CCO34_RS13175;Dbxref=GenBank:WP_000940032.1;Name=WP_000940032.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=CCO34_RS13175;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940032.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 24907 25401 . + . ID=gene-CCO34_RS13180;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=CCO34_RS13180;old_locus_tag=CCO34_13175 NZ_NPMD01000005.1 Protein Homology CDS 24907 25401 . + 0 ID=cds-WP_001241346.1;Parent=gene-CCO34_RS13180;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=CCO34_RS13180;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 25582 26796 . + . ID=gene-CCO34_RS13185;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=CCO34_RS13185;old_locus_tag=CCO34_13180 NZ_NPMD01000005.1 Protein Homology CDS 25582 26796 . + 0 ID=cds-WP_000775263.1;Parent=gene-CCO34_RS13185;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=CCO34_RS13185;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 26824 27210 . + . ID=gene-CCO34_RS13190;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=CCO34_RS13190;old_locus_tag=CCO34_13185 NZ_NPMD01000005.1 Protein Homology CDS 26824 27210 . + 0 ID=cds-WP_000331704.1;Parent=gene-CCO34_RS13190;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=CCO34_RS13190;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 27239 27562 . + . ID=gene-CCO34_RS13195;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=CCO34_RS13195;old_locus_tag=CCO34_13190 NZ_NPMD01000005.1 Protein Homology CDS 27239 27562 . + 0 ID=cds-WP_000028952.1;Parent=gene-CCO34_RS13195;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=CCO34_RS13195;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 27758 28273 . + . ID=gene-CCO34_RS13200;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=CCO34_RS13200;old_locus_tag=CCO34_13195 NZ_NPMD01000005.1 Protein Homology CDS 27758 28273 . + 0 ID=cds-WP_000384398.1;Parent=gene-CCO34_RS13200;Dbxref=GenBank:WP_000384398.1;Name=WP_000384398.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=CCO34_RS13200;product=co-chaperone HscB;protein_id=WP_000384398.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 28286 30136 . + . ID=gene-CCO34_RS13205;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=CCO34_RS13205;old_locus_tag=CCO34_13200 NZ_NPMD01000005.1 Protein Homology CDS 28286 30136 . + 0 ID=cds-WP_001196671.1;Parent=gene-CCO34_RS13205;Dbxref=GenBank:WP_001196671.1;Name=WP_001196671.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=CCO34_RS13205;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196671.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 30138 30473 . + . ID=gene-CCO34_RS13210;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=CCO34_RS13210;old_locus_tag=CCO34_13205 NZ_NPMD01000005.1 Protein Homology CDS 30138 30473 . + 0 ID=cds-WP_001124466.1;Parent=gene-CCO34_RS13210;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=CCO34_RS13210;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 30485 30685 . + . ID=gene-CCO34_RS13215;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=CCO34_RS13215;old_locus_tag=CCO34_13210 NZ_NPMD01000005.1 Protein Homology CDS 30485 30685 . + 0 ID=cds-WP_000523621.1;Parent=gene-CCO34_RS13215;Dbxref=GenBank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=CCO34_RS13215;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 30932 32215 . + . ID=gene-CCO34_RS13225;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=CCO34_RS13225;old_locus_tag=CCO34_13220 NZ_NPMD01000005.1 Protein Homology CDS 30932 32215 . + 0 ID=cds-WP_000133541.1;Parent=gene-CCO34_RS13225;Dbxref=GenBank:WP_000133541.1;Name=WP_000133541.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=CCO34_RS13225;product=aminopeptidase PepB;protein_id=WP_000133541.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 32322 33098 . + . ID=gene-CCO34_RS13230;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO34_RS13230;old_locus_tag=CCO34_13225 NZ_NPMD01000005.1 Protein Homology CDS 32322 33098 . + 0 ID=cds-WP_001522413.1;Parent=gene-CCO34_RS13230;Dbxref=GenBank:WP_001522413.1;Name=WP_001522413.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=CCO34_RS13230;product=enhanced serine sensitivity protein SseB;protein_id=WP_001522413.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 33135 33251 . - . ID=gene-CCO34_RS26045;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=CCO34_RS26045 NZ_NPMD01000005.1 Protein Homology CDS 33135 33251 . - 0 ID=cds-WP_242618368.1;Parent=gene-CCO34_RS26045;Dbxref=GenBank:WP_242618368.1;Name=WP_242618368.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=CCO34_RS26045;product=small toxic inner membrane protein TimP;protein_id=WP_242618368.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 33667 34335 . - . ID=gene-CCO34_RS13240;Name=CCO34_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13240;old_locus_tag=CCO34_13235 NZ_NPMD01000005.1 Protein Homology CDS 33667 34335 . - 0 ID=cds-WP_023228697.1;Parent=gene-CCO34_RS13240;Dbxref=GenBank:WP_023228697.1;Name=WP_023228697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=CCO34_RS13240;product=DUF5066 family protein;protein_id=WP_023228697.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 34581 35423 . - . ID=gene-CCO34_RS13250;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO34_RS13250;old_locus_tag=CCO34_13245 NZ_NPMD01000005.1 Protein Homology CDS 34581 35423 . - 0 ID=cds-WP_000205251.1;Parent=gene-CCO34_RS13250;Dbxref=GenBank:WP_000205251.1;Name=WP_000205251.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=CCO34_RS13250;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000205251.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 35632 40566 . + . ID=gene-CCO34_RS13255;Name=CCO34_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13255;old_locus_tag=CCO34_13250 NZ_NPMD01000005.1 Protein Homology CDS 35632 40566 . + 0 ID=cds-WP_023228698.1;Parent=gene-CCO34_RS13255;Dbxref=GenBank:WP_023228698.1;Name=WP_023228698.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=CCO34_RS13255;product=alpha-2-macroglobulin family protein;protein_id=WP_023228698.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 40567 42882 . + . ID=gene-CCO34_RS13260;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=CCO34_RS13260;old_locus_tag=CCO34_13255 NZ_NPMD01000005.1 Protein Homology CDS 40567 42882 . + 0 ID=cds-WP_023228699.1;Parent=gene-CCO34_RS13260;Dbxref=GenBank:WP_023228699.1;Name=WP_023228699.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=CCO34_RS13260;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_023228699.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 43038 45416 . + . ID=gene-CCO34_RS13265;Name=CCO34_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13265;old_locus_tag=CCO34_13260 NZ_NPMD01000005.1 Protein Homology CDS 43038 45416 . + 0 ID=cds-WP_001531907.1;Parent=gene-CCO34_RS13265;Dbxref=GenBank:WP_001531907.1;Name=WP_001531907.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=CCO34_RS13265;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_001531907.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 45413 46042 . + . ID=gene-CCO34_RS13270;Name=CCO34_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13270;old_locus_tag=CCO34_13265 NZ_NPMD01000005.1 Protein Homology CDS 45413 46042 . + 0 ID=cds-WP_000077436.1;Parent=gene-CCO34_RS13270;Dbxref=GenBank:WP_000077436.1;Name=WP_000077436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=CCO34_RS13270;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000077436.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 46035 46844 . + . ID=gene-CCO34_RS13275;Name=CCO34_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13275;old_locus_tag=CCO34_13270 NZ_NPMD01000005.1 Protein Homology CDS 46035 46844 . + 0 ID=cds-WP_023228700.1;Parent=gene-CCO34_RS13275;Dbxref=GenBank:WP_023228700.1;Name=WP_023228700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=CCO34_RS13275;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_023228700.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 46844 47707 . + . ID=gene-CCO34_RS13280;Name=CCO34_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13280;old_locus_tag=CCO34_13275 NZ_NPMD01000005.1 Protein Homology CDS 46844 47707 . + 0 ID=cds-WP_021000598.1;Parent=gene-CCO34_RS13280;Dbxref=GenBank:WP_021000598.1;Name=WP_021000598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=CCO34_RS13280;product=4Fe-4S binding protein;protein_id=WP_021000598.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 47828 48259 . + . ID=gene-CCO34_RS13285;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CCO34_RS13285;old_locus_tag=CCO34_13280 NZ_NPMD01000005.1 Protein Homology CDS 47828 48259 . + 0 ID=cds-WP_000963846.1;Parent=gene-CCO34_RS13285;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=CCO34_RS13285;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 48466 49632 . + . ID=gene-CCO34_RS13290;Name=CCO34_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13290;old_locus_tag=CCO34_13285 NZ_NPMD01000005.1 Protein Homology CDS 48466 49632 . + 0 ID=cds-WP_000003206.1;Parent=gene-CCO34_RS13290;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=CCO34_RS13290;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 49924 50922 . + . ID=gene-CCO34_RS13300;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=CCO34_RS13300;old_locus_tag=CCO34_13295 NZ_NPMD01000005.1 Protein Homology CDS 49924 50922 . + 0 ID=cds-WP_001090888.1;Parent=gene-CCO34_RS13300;Dbxref=GenBank:WP_001090888.1;Name=WP_001090888.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=CCO34_RS13300;product=cytoskeleton protein RodZ;protein_id=WP_001090888.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 50949 52067 . + . ID=gene-CCO34_RS13305;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CCO34_RS13305;old_locus_tag=CCO34_13300 NZ_NPMD01000005.1 Protein Homology CDS 50949 52067 . + 0 ID=cds-WP_000551804.1;Parent=gene-CCO34_RS13305;Dbxref=GenBank:WP_000551804.1;Name=WP_000551804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=CCO34_RS13305;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551804.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 52178 53452 . + . ID=gene-CCO34_RS13310;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CCO34_RS13310;old_locus_tag=CCO34_13305 NZ_NPMD01000005.1 Protein Homology CDS 52178 53452 . + 0 ID=cds-WP_001107146.1;Parent=gene-CCO34_RS13310;Dbxref=GenBank:WP_001107146.1;Name=WP_001107146.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=CCO34_RS13310;product=histidine--tRNA ligase;protein_id=WP_001107146.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 53466 54086 . + . ID=gene-CCO34_RS13315;Name=CCO34_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13315;old_locus_tag=CCO34_13310 NZ_NPMD01000005.1 Protein Homology CDS 53466 54086 . + 0 ID=cds-WP_000409190.1;Parent=gene-CCO34_RS13315;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=CCO34_RS13315;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 54097 55275 . + . ID=gene-CCO34_RS13320;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=CCO34_RS13320;old_locus_tag=CCO34_13315 NZ_NPMD01000005.1 Protein Homology CDS 54097 55275 . + 0 ID=cds-WP_001177074.1;Parent=gene-CCO34_RS13320;Dbxref=GenBank:WP_001177074.1;Name=WP_001177074.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=CCO34_RS13320;product=outer membrane protein assembly factor BamB;protein_id=WP_001177074.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 55392 56864 . + . ID=gene-CCO34_RS13325;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CCO34_RS13325;old_locus_tag=CCO34_13320 NZ_NPMD01000005.1 Protein Homology CDS 55392 56864 . + 0 ID=cds-WP_000249411.1;Parent=gene-CCO34_RS13325;Dbxref=GenBank:WP_000249411.1;Name=WP_000249411.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=CCO34_RS13325;product=ribosome biogenesis GTPase Der;protein_id=WP_000249411.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 56953 57174 . + . ID=gene-CCO34_RS13330;Name=CCO34_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13330;old_locus_tag=CCO34_13325 NZ_NPMD01000005.1 Protein Homology CDS 56953 57174 . + 0 ID=cds-WP_000406466.1;Parent=gene-CCO34_RS13330;Dbxref=GenBank:WP_000406466.1;Name=WP_000406466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=CCO34_RS13330;product=zinc ribbon domain-containing protein;protein_id=WP_000406466.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 57520 59712 . + . ID=gene-CCO34_RS13335;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=CCO34_RS13335;old_locus_tag=CCO34_13330 NZ_NPMD01000005.1 Protein Homology CDS 57520 59712 . + 0 ID=cds-WP_000252220.1;Parent=gene-CCO34_RS13335;Dbxref=GenBank:WP_000252220.1;Name=WP_000252220.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=CCO34_RS13335;product=intimin-like inverse autotransporter SinH;protein_id=WP_000252220.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 59770 60729 . + . ID=gene-CCO34_RS13340;Name=CCO34_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13340;old_locus_tag=CCO34_13335 NZ_NPMD01000005.1 Protein Homology CDS 59770 60729 . + 0 ID=cds-WP_001149064.1;Parent=gene-CCO34_RS13340;Dbxref=GenBank:WP_001149064.1;Name=WP_001149064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=CCO34_RS13340;product=SinI family autotransporter-associated protein;protein_id=WP_001149064.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 60849 66446 . + . ID=gene-CCO34_RS13345;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=CCO34_RS13345;old_locus_tag=CCO34_13340 NZ_NPMD01000005.1 Protein Homology CDS 60849 66446 . + 0 ID=cds-WP_071786181.1;Parent=gene-CCO34_RS13345;Dbxref=GenBank:WP_071786181.1;Name=WP_071786181.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=CCO34_RS13345;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_071786181.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 66612 73919 . + . ID=gene-CCO34_RS13350;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;locus_tag=CCO34_RS13350;old_locus_tag=CCO34_13345 NZ_NPMD01000005.1 Protein Homology CDS 66612 73919 . + 0 ID=cds-WP_023228702.1;Parent=gene-CCO34_RS13350;Dbxref=GenBank:WP_023228702.1;Name=WP_023228702.1;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=CCO34_RS13350;product=DUF823/DUF824 repeat adhesin RatB;protein_id=WP_023228702.1;transl_table=11 NZ_NPMD01000005.1 RefSeq pseudogene 73920 74020 . + . ID=gene-CCO34_RS26210;Name=CCO34_RS26210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26210;partial=true;pseudo=true;start_range=.,73920 NZ_NPMD01000005.1 Protein Homology CDS 73920 74020 . + 0 ID=cds-CCO34_RS26210;Parent=gene-CCO34_RS26210;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_309258417.1;locus_tag=CCO34_RS26210;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,73920;transl_table=11 NZ_NPMD01000005.1 RefSeq pseudogene 74580 80516 . + . ID=gene-CCO34_RS26050;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=pseudogene;locus_tag=CCO34_RS26050;old_locus_tag=CCO34_13350;pseudo=true NZ_NPMD01000005.1 Protein Homology CDS 74580 80516 . + 0 ID=cds-CCO34_RS26050;Parent=gene-CCO34_RS26050;Note=internal stop;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=CCO34_RS26050;product=fibronectin-binding autotransporter adhesin ShdA;pseudo=true;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 80680 82029 . - . ID=gene-CCO34_RS13360;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CCO34_RS13360;old_locus_tag=CCO34_13355 NZ_NPMD01000005.1 Protein Homology CDS 80680 82029 . - 0 ID=cds-WP_000953168.1;Parent=gene-CCO34_RS13360;Dbxref=GenBank:WP_000953168.1;Name=WP_000953168.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=CCO34_RS13360;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000953168.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 82190 83656 . + . ID=gene-CCO34_RS13365;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CCO34_RS13365;old_locus_tag=CCO34_13360 NZ_NPMD01000005.1 Protein Homology CDS 82190 83656 . + 0 ID=cds-WP_094965459.1;Parent=gene-CCO34_RS13365;Dbxref=GenBank:WP_094965459.1;Name=WP_094965459.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=CCO34_RS13365;product=IMP dehydrogenase;protein_id=WP_094965459.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 83726 85303 . + . ID=gene-CCO34_RS13370;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CCO34_RS13370;old_locus_tag=CCO34_13365 NZ_NPMD01000005.1 Protein Homology CDS 83726 85303 . + 0 ID=cds-WP_000138293.1;Parent=gene-CCO34_RS13370;Dbxref=GenBank:WP_000138293.1;Name=WP_000138293.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=CCO34_RS13370;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138293.1;transl_table=11 NZ_NPMD01000005.1 RefSeq pseudogene 85439 85756 . + . ID=gene-CCO34_RS13375;Name=CCO34_RS13375;end_range=85756,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS13375;old_locus_tag=CCO34_13370;partial=true;pseudo=true;start_range=.,85439 NZ_NPMD01000005.1 Protein Homology CDS 85439 85756 . + 0 ID=cds-CCO34_RS13375;Parent=gene-CCO34_RS13375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=85756,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=CCO34_RS13375;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,85439;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 85837 86166 . - . ID=gene-CCO34_RS13380;Name=CCO34_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13380;old_locus_tag=CCO34_13375 NZ_NPMD01000005.1 Protein Homology CDS 85837 86166 . - 0 ID=cds-WP_023228776.1;Parent=gene-CCO34_RS13380;Dbxref=GenBank:WP_023228776.1;Name=WP_023228776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=CCO34_RS13380;product=DUF1493 family protein;protein_id=WP_023228776.1;transl_table=11 NZ_NPMD01000005.1 RefSeq pseudogene 86151 86371 . - . ID=gene-CCO34_RS26215;Name=CCO34_RS26215;end_range=86371,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26215;partial=true;pseudo=true NZ_NPMD01000005.1 Protein Homology CDS 86151 86371 . - 0 ID=cds-CCO34_RS26215;Parent=gene-CCO34_RS26215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=86371,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_125368327.1;locus_tag=CCO34_RS26215;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000005.1 RefSeq pseudogene 86630 86773 . + . ID=gene-CCO34_RS25825;Name=CCO34_RS25825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25825;partial=true;pseudo=true;start_range=.,86630 NZ_NPMD01000005.1 Protein Homology CDS 86630 86773 . + 0 ID=cds-CCO34_RS25825;Parent=gene-CCO34_RS25825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=CCO34_RS25825;partial=true;product=hypothetical protein;pseudo=true;start_range=.,86630;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 86852 87043 . - . ID=gene-CCO34_RS13390;Name=CCO34_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13390;old_locus_tag=CCO34_13385 NZ_NPMD01000005.1 Protein Homology CDS 86852 87043 . - 0 ID=cds-WP_000075924.1;Parent=gene-CCO34_RS13390;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=CCO34_RS13390;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 87222 87359 . + . ID=gene-CCO34_RS13395;Name=CCO34_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13395;old_locus_tag=CCO34_13390 NZ_NPMD01000005.1 Protein Homology CDS 87222 87359 . + 0 ID=cds-WP_001540598.1;Parent=gene-CCO34_RS13395;Dbxref=GenBank:WP_001540598.1;Name=WP_001540598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=CCO34_RS13395;product=hypothetical protein;protein_id=WP_001540598.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 87456 89669 . + . ID=gene-CCO34_RS13400;Name=CCO34_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13400;old_locus_tag=CCO34_13395 NZ_NPMD01000005.1 Protein Homology CDS 87456 89669 . + 0 ID=cds-WP_000773647.1;Parent=gene-CCO34_RS13400;Dbxref=GenBank:WP_000773647.1;Name=WP_000773647.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=CCO34_RS13400;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000773647.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 89705 91246 . - . ID=gene-CCO34_RS13405;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CCO34_RS13405;old_locus_tag=CCO34_13400 NZ_NPMD01000005.1 Protein Homology CDS 89705 91246 . - 0 ID=cds-WP_001123330.1;Parent=gene-CCO34_RS13405;Dbxref=GenBank:WP_001123330.1;Name=WP_001123330.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=CCO34_RS13405;product=exopolyphosphatase;protein_id=WP_001123330.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 91251 93317 . - . ID=gene-CCO34_RS13410;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=CCO34_RS13410;old_locus_tag=CCO34_13405 NZ_NPMD01000005.1 Protein Homology CDS 91251 93317 . - 0 ID=cds-WP_000529555.1;Parent=gene-CCO34_RS13410;Dbxref=GenBank:WP_000529555.1;Name=WP_000529555.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=CCO34_RS13410;product=polyphosphate kinase 1;protein_id=WP_000529555.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 93506 94144 . - . ID=gene-CCO34_RS13415;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CCO34_RS13415;old_locus_tag=CCO34_13410 NZ_NPMD01000005.1 Protein Homology CDS 93506 94144 . - 0 ID=cds-WP_001028593.1;Parent=gene-CCO34_RS13415;Dbxref=GenBank:WP_001028593.1;Name=WP_001028593.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=CCO34_RS13415;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028593.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 94144 95181 . - . ID=gene-CCO34_RS13420;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CCO34_RS13420;old_locus_tag=CCO34_13415 NZ_NPMD01000005.1 Protein Homology CDS 94144 95181 . - 0 ID=cds-WP_000130477.1;Parent=gene-CCO34_RS13420;Dbxref=GenBank:WP_000130477.1;Name=WP_000130477.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=CCO34_RS13420;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_000130477.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 95595 96221 . + . ID=gene-CCO34_RS13430;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CCO34_RS13430;old_locus_tag=CCO34_13425 NZ_NPMD01000005.1 Protein Homology CDS 95595 96221 . + 0 ID=cds-WP_000706208.1;Parent=gene-CCO34_RS13430;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=CCO34_RS13430;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 96309 97598 . + . ID=gene-CCO34_RS13435;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=CCO34_RS13435;old_locus_tag=CCO34_13430 NZ_NPMD01000005.1 Protein Homology CDS 96309 97598 . + 0 ID=cds-WP_000198335.1;Parent=gene-CCO34_RS13435;Dbxref=GenBank:WP_000198335.1;Name=WP_000198335.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=CCO34_RS13435;product=uracil permease;protein_id=WP_000198335.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 97693 98394 . + . ID=gene-CCO34_RS13440;Name=CCO34_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13440;old_locus_tag=CCO34_13435 NZ_NPMD01000005.1 Protein Homology CDS 97693 98394 . + 0 ID=cds-WP_061835882.1;Parent=gene-CCO34_RS13440;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=CCO34_RS13440;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 98421 98780 . - . ID=gene-CCO34_RS13445;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CCO34_RS13445;old_locus_tag=CCO34_13440 NZ_NPMD01000005.1 Protein Homology CDS 98421 98780 . - 0 ID=cds-WP_000132648.1;Parent=gene-CCO34_RS13445;Dbxref=GenBank:WP_000132648.1;Name=WP_000132648.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=CCO34_RS13445;product=arsenate reductase (glutaredoxin);protein_id=WP_000132648.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 98820 100283 . - . ID=gene-CCO34_RS13450;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=CCO34_RS13450;old_locus_tag=CCO34_13445 NZ_NPMD01000005.1 Protein Homology CDS 98820 100283 . - 0 ID=cds-WP_000489630.1;Parent=gene-CCO34_RS13450;Dbxref=GenBank:WP_000489630.1;Name=WP_000489630.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=CCO34_RS13450;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489630.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 100491 101558 . + . ID=gene-CCO34_RS13455;Name=CCO34_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13455;old_locus_tag=CCO34_13450 NZ_NPMD01000005.1 Protein Homology CDS 100491 101558 . + 0 ID=cds-WP_000892057.1;Parent=gene-CCO34_RS13455;Dbxref=GenBank:WP_000892057.1;Name=WP_000892057.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=CCO34_RS13455;product=AI-2E family transporter;protein_id=WP_000892057.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 101835 103022 . + . ID=gene-CCO34_RS13460;Name=CCO34_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13460;old_locus_tag=CCO34_13455 NZ_NPMD01000005.1 Protein Homology CDS 101835 103022 . + 0 ID=cds-WP_001533732.1;Parent=gene-CCO34_RS13460;Dbxref=GenBank:WP_001533732.1;Name=WP_001533732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=CCO34_RS13460;product=sugar diacid recognition domain-containing protein;protein_id=WP_001533732.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 103090 104358 . + . ID=gene-CCO34_RS13465;Name=CCO34_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13465;old_locus_tag=CCO34_13460 NZ_NPMD01000005.1 Protein Homology CDS 103090 104358 . + 0 ID=cds-WP_000200859.1;Parent=gene-CCO34_RS13465;Dbxref=GenBank:WP_000200859.1;Name=WP_000200859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=CCO34_RS13465;product=GntP family permease;protein_id=WP_000200859.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 104364 105503 . + . ID=gene-CCO34_RS13470;Name=CCO34_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13470;old_locus_tag=CCO34_13465 NZ_NPMD01000005.1 Protein Homology CDS 104364 105503 . + 0 ID=cds-WP_000706367.1;Parent=gene-CCO34_RS13470;Dbxref=GenBank:WP_000706367.1;Name=WP_000706367.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=CCO34_RS13470;product=glycerate kinase;protein_id=WP_000706367.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 105550 106020 . - . ID=gene-CCO34_RS13475;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CCO34_RS13475;old_locus_tag=CCO34_13470 NZ_NPMD01000005.1 Protein Homology CDS 105550 106020 . - 0 ID=cds-WP_001068686.1;Parent=gene-CCO34_RS13475;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=CCO34_RS13475;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 106020 106592 . - . ID=gene-CCO34_RS13480;Name=CCO34_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13480;old_locus_tag=CCO34_13475 NZ_NPMD01000005.1 Protein Homology CDS 106020 106592 . - 0 ID=cds-WP_000189061.1;Parent=gene-CCO34_RS13480;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=CCO34_RS13480;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 106738 107616 . + . ID=gene-CCO34_RS13485;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CCO34_RS13485;old_locus_tag=CCO34_13480 NZ_NPMD01000005.1 Protein Homology CDS 106738 107616 . + 0 ID=cds-WP_000494020.1;Parent=gene-CCO34_RS13485;Dbxref=GenBank:WP_000494020.1;Name=WP_000494020.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=CCO34_RS13485;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494020.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 107633 108667 . + . ID=gene-CCO34_RS13490;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=CCO34_RS13490;old_locus_tag=CCO34_13485 NZ_NPMD01000005.1 Protein Homology CDS 107633 108667 . + 0 ID=cds-WP_000331877.1;Parent=gene-CCO34_RS13490;Dbxref=GenBank:WP_000331877.1;Name=WP_000331877.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=CCO34_RS13490;product=outer membrane protein assembly factor BamC;protein_id=WP_000331877.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 108842 109555 . + . ID=gene-CCO34_RS13495;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CCO34_RS13495;old_locus_tag=CCO34_13490 NZ_NPMD01000005.1 Protein Homology CDS 108842 109555 . + 0 ID=cds-WP_001171630.1;Parent=gene-CCO34_RS13495;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=CCO34_RS13495;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 109686 110549 . + . ID=gene-CCO34_RS13500;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=CCO34_RS13500;old_locus_tag=CCO34_13495 NZ_NPMD01000005.1 Protein Homology CDS 109686 110549 . + 0 ID=cds-WP_001267523.1;Parent=gene-CCO34_RS13500;Dbxref=GenBank:WP_001267523.1;Name=WP_001267523.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=CCO34_RS13500;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267523.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 110565 112583 . + . ID=gene-CCO34_RS13505;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=CCO34_RS13505;old_locus_tag=CCO34_13500 NZ_NPMD01000005.1 Protein Homology CDS 110565 112583 . + 0 ID=cds-WP_001279837.1;Parent=gene-CCO34_RS13505;Dbxref=GenBank:WP_001279837.1;Name=WP_001279837.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=CCO34_RS13505;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_001279837.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 112610 112810 . - . ID=gene-CCO34_RS13510;Name=CCO34_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13510;old_locus_tag=CCO34_13505 NZ_NPMD01000005.1 Protein Homology CDS 112610 112810 . - 0 ID=cds-WP_000383842.1;Parent=gene-CCO34_RS13510;Dbxref=GenBank:WP_000383842.1;Name=WP_000383842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=CCO34_RS13510;product=YpfN family protein;protein_id=WP_000383842.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 112838 113965 . - . ID=gene-CCO34_RS13515;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=CCO34_RS13515;old_locus_tag=CCO34_13510 NZ_NPMD01000005.1 Protein Homology CDS 112838 113965 . - 0 ID=cds-WP_001277825.1;Parent=gene-CCO34_RS13515;Dbxref=GenBank:WP_001277825.1;Name=WP_001277825.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=CCO34_RS13515;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277825.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 113969 114325 . - . ID=gene-CCO34_RS13520;Name=CCO34_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13520;old_locus_tag=CCO34_13515 NZ_NPMD01000005.1 Protein Homology CDS 113969 114325 . - 0 ID=cds-WP_000631923.1;Parent=gene-CCO34_RS13520;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=CCO34_RS13520;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 114738 114797 . + . ID=gene-CCO34_RS25340;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=CCO34_RS25340 NZ_NPMD01000005.1 Protein Homology CDS 114738 114797 . + 0 ID=cds-WP_001386977.1;Parent=gene-CCO34_RS25340;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=CCO34_RS25340;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 114899 118012 . - . ID=gene-CCO34_RS13525;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=CCO34_RS13525;old_locus_tag=CCO34_13520 NZ_NPMD01000005.1 Protein Homology CDS 114899 118012 . - 0 ID=cds-WP_001263090.1;Parent=gene-CCO34_RS13525;Dbxref=GenBank:WP_001263090.1;Name=WP_001263090.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=CCO34_RS13525;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001263090.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 118197 119897 . - . ID=gene-CCO34_RS13530;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=CCO34_RS13530;old_locus_tag=CCO34_13525 NZ_NPMD01000005.1 Protein Homology CDS 118197 119897 . - 0 ID=cds-WP_000216817.1;Parent=gene-CCO34_RS13530;Dbxref=GenBank:WP_000216817.1;Name=WP_000216817.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=CCO34_RS13530;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000216817.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 120083 122044 . + . ID=gene-CCO34_RS13535;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=CCO34_RS13535;old_locus_tag=CCO34_13530 NZ_NPMD01000005.1 Protein Homology CDS 120083 122044 . + 0 ID=cds-WP_001078945.1;Parent=gene-CCO34_RS13535;Dbxref=GenBank:WP_001078945.1;Name=WP_001078945.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=CCO34_RS13535;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078945.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 122494 123792 . - . ID=gene-CCO34_RS13540;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=CCO34_RS13540;old_locus_tag=CCO34_13535 NZ_NPMD01000005.1 Protein Homology CDS 122494 123792 . - 0 ID=cds-WP_000673293.1;Parent=gene-CCO34_RS13540;Dbxref=GenBank:WP_000673293.1;Name=WP_000673293.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=CCO34_RS13540;product=penicillin binding protein PBP4B;protein_id=WP_000673293.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 123996 124571 . + . ID=gene-CCO34_RS13545;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=CCO34_RS13545;old_locus_tag=CCO34_13540 NZ_NPMD01000005.1 Protein Homology CDS 123996 124571 . + 0 ID=cds-WP_000084039.1;Parent=gene-CCO34_RS13545;Dbxref=GenBank:WP_000084039.1;Name=WP_000084039.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=CCO34_RS13545;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084039.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 124696 125739 . + . ID=gene-CCO34_RS13550;Name=CCO34_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13550;old_locus_tag=CCO34_13545 NZ_NPMD01000005.1 Protein Homology CDS 124696 125739 . + 0 ID=cds-WP_001270668.1;Parent=gene-CCO34_RS13550;Dbxref=GenBank:WP_001270668.1;Name=WP_001270668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=CCO34_RS13550;product=DUF1176 domain-containing protein;protein_id=WP_001270668.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 125867 126097 . + . ID=gene-CCO34_RS13555;Name=CCO34_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13555;old_locus_tag=CCO34_13550 NZ_NPMD01000005.1 Protein Homology CDS 125867 126097 . + 0 ID=cds-WP_000700635.1;Parent=gene-CCO34_RS13555;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=CCO34_RS13555;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 126160 128160 . - . ID=gene-CCO34_RS13560;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO34_RS13560;old_locus_tag=CCO34_13555 NZ_NPMD01000005.1 Protein Homology CDS 126160 128160 . - 0 ID=cds-WP_000087325.1;Parent=gene-CCO34_RS13560;Dbxref=GenBank:WP_000087325.1;Name=WP_000087325.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=CCO34_RS13560;product=transketolase;protein_id=WP_000087325.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 128180 129130 . - . ID=gene-CCO34_RS13565;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO34_RS13565;old_locus_tag=CCO34_13560 NZ_NPMD01000005.1 Protein Homology CDS 128180 129130 . - 0 ID=cds-WP_001072443.1;Parent=gene-CCO34_RS13565;Dbxref=GenBank:WP_001072443.1;Name=WP_001072443.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=CCO34_RS13565;product=transaldolase;protein_id=WP_001072443.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 129402 131681 . + . ID=gene-CCO34_RS13575;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=CCO34_RS13575;old_locus_tag=CCO34_13570 NZ_NPMD01000005.1 Protein Homology CDS 129402 131681 . + 0 ID=cds-WP_000344299.1;Parent=gene-CCO34_RS13575;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=CCO34_RS13575;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 132098 132433 . + . ID=gene-CCO34_RS13580;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=CCO34_RS13580;old_locus_tag=CCO34_13575 NZ_NPMD01000005.1 Protein Homology CDS 132098 132433 . + 0 ID=cds-WP_001031445.1;Parent=gene-CCO34_RS13580;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=CCO34_RS13580;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 132446 132925 . + . ID=gene-CCO34_RS13585;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=CCO34_RS13585;old_locus_tag=CCO34_13580 NZ_NPMD01000005.1 Protein Homology CDS 132446 132925 . + 0 ID=cds-WP_000820751.1;Parent=gene-CCO34_RS13585;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=CCO34_RS13585;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 132903 133592 . + . ID=gene-CCO34_RS13590;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=CCO34_RS13590;old_locus_tag=CCO34_13585 NZ_NPMD01000005.1 Protein Homology CDS 132903 133592 . + 0 ID=cds-WP_000733861.1;Parent=gene-CCO34_RS13590;Dbxref=GenBank:WP_000733861.1;Name=WP_000733861.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=CCO34_RS13590;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733861.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 133589 134392 . + . ID=gene-CCO34_RS13595;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=CCO34_RS13595;old_locus_tag=CCO34_13590 NZ_NPMD01000005.1 Protein Homology CDS 133589 134392 . + 0 ID=cds-WP_000997653.1;Parent=gene-CCO34_RS13595;Dbxref=GenBank:WP_000997653.1;Name=WP_000997653.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=CCO34_RS13595;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997653.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 134389 135405 . + . ID=gene-CCO34_RS13600;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO34_RS13600;old_locus_tag=CCO34_13595 NZ_NPMD01000005.1 Protein Homology CDS 134389 135405 . + 0 ID=cds-WP_000582927.1;Parent=gene-CCO34_RS13600;Dbxref=GenBank:WP_000582927.1;Name=WP_000582927.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=CCO34_RS13600;product=phosphate acetyltransferase;protein_id=WP_000582927.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 135446 135736 . + . ID=gene-CCO34_RS13605;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=CCO34_RS13605;old_locus_tag=CCO34_13600 NZ_NPMD01000005.1 Protein Homology CDS 135446 135736 . + 0 ID=cds-WP_000387716.1;Parent=gene-CCO34_RS13605;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=CCO34_RS13605;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 135849 136136 . + . ID=gene-CCO34_RS13610;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=CCO34_RS13610;old_locus_tag=CCO34_13605 NZ_NPMD01000005.1 Protein Homology CDS 135849 136136 . + 0 ID=cds-WP_001522340.1;Parent=gene-CCO34_RS13610;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=CCO34_RS13610;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 136148 137551 . + . ID=gene-CCO34_RS13615;Name=CCO34_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13615;old_locus_tag=CCO34_13610 NZ_NPMD01000005.1 Protein Homology CDS 136148 137551 . + 0 ID=cds-WP_001075640.1;Parent=gene-CCO34_RS13615;Dbxref=GenBank:WP_001075640.1;Name=WP_001075640.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=CCO34_RS13615;product=aldehyde dehydrogenase family protein;protein_id=WP_001075640.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 137562 138401 . + . ID=gene-CCO34_RS13620;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=CCO34_RS13620;old_locus_tag=CCO34_13615 NZ_NPMD01000005.1 Protein Homology CDS 137562 138401 . + 0 ID=cds-WP_000929667.1;Parent=gene-CCO34_RS13620;Dbxref=GenBank:WP_000929667.1;Name=WP_000929667.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=CCO34_RS13620;product=ethanolamine utilization protein EutJ;protein_id=WP_000929667.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 138391 139578 . + . ID=gene-CCO34_RS13625;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=CCO34_RS13625;old_locus_tag=CCO34_13620 NZ_NPMD01000005.1 Protein Homology CDS 138391 139578 . + 0 ID=cds-WP_001147501.1;Parent=gene-CCO34_RS13625;Dbxref=GenBank:WP_001147501.1;Name=WP_001147501.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=CCO34_RS13625;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147501.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 139698 140924 . + . ID=gene-CCO34_RS13630;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=CCO34_RS13630;old_locus_tag=CCO34_13625 NZ_NPMD01000005.1 Protein Homology CDS 139698 140924 . + 0 ID=cds-WP_000512359.1;Parent=gene-CCO34_RS13630;Dbxref=GenBank:WP_000512359.1;Name=WP_000512359.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=CCO34_RS13630;product=ethanolamine utilization protein EutH;protein_id=WP_000512359.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 140921 142324 . + . ID=gene-CCO34_RS13635;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=CCO34_RS13635;old_locus_tag=CCO34_13630 NZ_NPMD01000005.1 Protein Homology CDS 140921 142324 . + 0 ID=cds-WP_001097511.1;Parent=gene-CCO34_RS13635;Dbxref=GenBank:WP_001097511.1;Name=WP_001097511.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=CCO34_RS13635;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097511.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 142336 143697 . + . ID=gene-CCO34_RS13640;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=CCO34_RS13640;old_locus_tag=CCO34_13635 NZ_NPMD01000005.1 Protein Homology CDS 142336 143697 . + 0 ID=cds-WP_000769990.1;Parent=gene-CCO34_RS13640;Dbxref=GenBank:WP_000769990.1;Name=WP_000769990.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=CCO34_RS13640;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769990.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 143716 144612 . + . ID=gene-CCO34_RS13645;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=CCO34_RS13645;old_locus_tag=CCO34_13640 NZ_NPMD01000005.1 Protein Homology CDS 143716 144612 . + 0 ID=cds-WP_000372354.1;Parent=gene-CCO34_RS13645;Dbxref=GenBank:WP_000372354.1;Name=WP_000372354.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=CCO34_RS13645;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372354.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 144622 145281 . + . ID=gene-CCO34_RS13650;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=CCO34_RS13650;old_locus_tag=CCO34_13645 NZ_NPMD01000005.1 Protein Homology CDS 144622 145281 . + 0 ID=cds-WP_001111056.1;Parent=gene-CCO34_RS13650;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=CCO34_RS13650;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 145294 145788 . + . ID=gene-CCO34_RS13655;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=CCO34_RS13655;old_locus_tag=CCO34_13650 NZ_NPMD01000005.1 Protein Homology CDS 145294 145788 . + 0 ID=cds-WP_000606266.1;Parent=gene-CCO34_RS13655;Dbxref=GenBank:WP_000606266.1;Name=WP_000606266.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=CCO34_RS13655;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606266.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 145836 146888 . + . ID=gene-CCO34_RS13660;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=CCO34_RS13660;old_locus_tag=CCO34_13655 NZ_NPMD01000005.1 Protein Homology CDS 145836 146888 . + 0 ID=cds-WP_000753665.1;Parent=gene-CCO34_RS13660;Dbxref=GenBank:WP_000753665.1;Name=WP_000753665.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=CCO34_RS13660;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753665.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 147067 147765 . + . ID=gene-CCO34_RS13665;Name=CCO34_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13665;old_locus_tag=CCO34_13660 NZ_NPMD01000005.1 Protein Homology CDS 147067 147765 . + 0 ID=cds-WP_001172085.1;Parent=gene-CCO34_RS13665;Dbxref=GenBank:WP_001172085.1;Name=WP_001172085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172085.1;locus_tag=CCO34_RS13665;product=hypothetical protein;protein_id=WP_001172085.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 147812 148711 . - . ID=gene-CCO34_RS13670;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=CCO34_RS13670;old_locus_tag=CCO34_13665 NZ_NPMD01000005.1 Protein Homology CDS 147812 148711 . - 0 ID=cds-WP_000801348.1;Parent=gene-CCO34_RS13670;Dbxref=GenBank:WP_000801348.1;Name=WP_000801348.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=CCO34_RS13670;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801348.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 148714 149583 . - . ID=gene-CCO34_RS13675;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=CCO34_RS13675;old_locus_tag=CCO34_13670 NZ_NPMD01000005.1 Protein Homology CDS 148714 149583 . - 0 ID=cds-WP_000102881.1;Parent=gene-CCO34_RS13675;Dbxref=GenBank:WP_000102881.1;Name=WP_000102881.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=CCO34_RS13675;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102881.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 149796 150221 . + . ID=gene-CCO34_RS13680;Name=CCO34_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13680;old_locus_tag=CCO34_13675 NZ_NPMD01000005.1 Protein Homology CDS 149796 150221 . + 0 ID=cds-WP_000406008.1;Parent=gene-CCO34_RS13680;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=CCO34_RS13680;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 150208 150657 . + . ID=gene-CCO34_RS13685;Name=CCO34_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13685;old_locus_tag=CCO34_13680 NZ_NPMD01000005.1 Protein Homology CDS 150208 150657 . + 0 ID=cds-WP_000842940.1;Parent=gene-CCO34_RS13685;Dbxref=GenBank:WP_000842940.1;Name=WP_000842940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=CCO34_RS13685;product=DUF2919 domain-containing protein;protein_id=WP_000842940.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 150719 151294 . + . ID=gene-CCO34_RS13690;Name=CCO34_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13690;old_locus_tag=CCO34_13685 NZ_NPMD01000005.1 Protein Homology CDS 150719 151294 . + 0 ID=cds-WP_000838976.1;Parent=gene-CCO34_RS13690;Dbxref=GenBank:WP_000838976.1;Name=WP_000838976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=CCO34_RS13690;product=RpoE-regulated lipoprotein;protein_id=WP_000838976.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 151389 152288 . + . ID=gene-CCO34_RS13695;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=CCO34_RS13695;old_locus_tag=CCO34_13690 NZ_NPMD01000005.1 Protein Homology CDS 151389 152288 . + 0 ID=cds-WP_000084583.1;Parent=gene-CCO34_RS13695;Dbxref=GenBank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=CCO34_RS13695;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 152526 153317 . + . ID=gene-CCO34_RS13700;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=CCO34_RS13700;old_locus_tag=CCO34_13695 NZ_NPMD01000005.1 Protein Homology CDS 152526 153317 . + 0 ID=cds-WP_000517460.1;Parent=gene-CCO34_RS13700;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=CCO34_RS13700;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 153475 154491 . + . ID=gene-CCO34_RS13705;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=CCO34_RS13705;old_locus_tag=CCO34_13700 NZ_NPMD01000005.1 Protein Homology CDS 153475 154491 . + 0 ID=cds-WP_000290189.1;Parent=gene-CCO34_RS13705;Dbxref=GenBank:WP_000290189.1;Name=WP_000290189.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=CCO34_RS13705;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290189.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 154491 155324 . + . ID=gene-CCO34_RS13710;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=CCO34_RS13710;old_locus_tag=CCO34_13705 NZ_NPMD01000005.1 Protein Homology CDS 154491 155324 . + 0 ID=cds-WP_000881745.1;Parent=gene-CCO34_RS13710;Dbxref=GenBank:WP_000881745.1;Name=WP_000881745.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=CCO34_RS13710;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881745.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 155324 156199 . + . ID=gene-CCO34_RS13715;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=CCO34_RS13715;old_locus_tag=CCO34_13710 NZ_NPMD01000005.1 Protein Homology CDS 155324 156199 . + 0 ID=cds-WP_000852705.1;Parent=gene-CCO34_RS13715;Dbxref=GenBank:WP_000852705.1;Name=WP_000852705.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=CCO34_RS13715;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852705.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 156189 157286 . + . ID=gene-CCO34_RS13720;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=CCO34_RS13720;old_locus_tag=CCO34_13715 NZ_NPMD01000005.1 Protein Homology CDS 156189 157286 . + 0 ID=cds-WP_000021076.1;Parent=gene-CCO34_RS13720;Dbxref=GenBank:WP_000021076.1;Name=WP_000021076.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=CCO34_RS13720;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021076.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 157354 158265 . + . ID=gene-CCO34_RS13725;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=CCO34_RS13725;old_locus_tag=CCO34_13720 NZ_NPMD01000005.1 Protein Homology CDS 157354 158265 . + 0 ID=cds-WP_001093883.1;Parent=gene-CCO34_RS13725;Dbxref=GenBank:WP_001093883.1;Name=WP_001093883.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=CCO34_RS13725;product=cysteine synthase CysM;protein_id=WP_001093883.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 158298 158675 . - . ID=gene-CCO34_RS13730;Name=CCO34_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13730;old_locus_tag=CCO34_13725 NZ_NPMD01000005.1 Protein Homology CDS 158298 158675 . - 0 ID=cds-WP_000710739.1;Parent=gene-CCO34_RS13730;Dbxref=GenBank:WP_000710739.1;Name=WP_000710739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710726.1;locus_tag=CCO34_RS13730;product=YfeK family protein;protein_id=WP_000710739.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 158734 159453 . - . ID=gene-CCO34_RS13735;Name=CCO34_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13735;old_locus_tag=CCO34_13730 NZ_NPMD01000005.1 Protein Homology CDS 158734 159453 . - 0 ID=cds-WP_001263761.1;Parent=gene-CCO34_RS13735;Dbxref=GenBank:WP_001263761.1;Name=WP_001263761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=CCO34_RS13735;product=GMP synthase;protein_id=WP_001263761.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 159468 160760 . - . ID=gene-CCO34_RS13740;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=CCO34_RS13740;old_locus_tag=CCO34_13735 NZ_NPMD01000005.1 Protein Homology CDS 159468 160760 . - 0 ID=cds-WP_000565104.1;Parent=gene-CCO34_RS13740;Dbxref=GenBank:WP_000565104.1;Name=WP_000565104.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=CCO34_RS13740;product=transcriptional regulator PtsJ;protein_id=WP_000565104.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 160843 161709 . + . ID=gene-CCO34_RS13745;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=CCO34_RS13745;old_locus_tag=CCO34_13740 NZ_NPMD01000005.1 Protein Homology CDS 160843 161709 . + 0 ID=cds-WP_000529613.1;Parent=gene-CCO34_RS13745;Dbxref=GenBank:WP_000529613.1;Name=WP_000529613.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=CCO34_RS13745;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000529613.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 161706 161945 . + . ID=gene-CCO34_RS13750;Name=CCO34_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13750;old_locus_tag=CCO34_13745 NZ_NPMD01000005.1 Protein Homology CDS 161706 161945 . + 0 ID=cds-WP_000844541.1;Parent=gene-CCO34_RS13750;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=CCO34_RS13750;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 162095 162604 . - . ID=gene-CCO34_RS13755;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=CCO34_RS13755;old_locus_tag=CCO34_13750 NZ_NPMD01000005.1 Protein Homology CDS 162095 162604 . - 0 ID=cds-WP_000522253.1;Parent=gene-CCO34_RS13755;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=CCO34_RS13755;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 162645 164372 . - . ID=gene-CCO34_RS13760;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=CCO34_RS13760;old_locus_tag=CCO34_13755 NZ_NPMD01000005.1 Protein Homology CDS 162645 164372 . - 0 ID=cds-WP_000623114.1;Parent=gene-CCO34_RS13760;Dbxref=GenBank:WP_000623114.1;Name=WP_000623114.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=CCO34_RS13760;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623114.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 164421 164678 . - . ID=gene-CCO34_RS13765;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=CCO34_RS13765;old_locus_tag=CCO34_13760 NZ_NPMD01000005.1 Protein Homology CDS 164421 164678 . - 0 ID=cds-WP_000487600.1;Parent=gene-CCO34_RS13765;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=CCO34_RS13765;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 165062 166033 . - . ID=gene-CCO34_RS13770;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CCO34_RS13770;old_locus_tag=CCO34_13765 NZ_NPMD01000005.1 Protein Homology CDS 165062 166033 . - 0 ID=cds-WP_000036904.1;Parent=gene-CCO34_RS13770;Dbxref=GenBank:WP_000036904.1;Name=WP_000036904.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=CCO34_RS13770;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 166197 166958 . - . ID=gene-CCO34_RS13775;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=CCO34_RS13775;old_locus_tag=CCO34_13770 NZ_NPMD01000005.1 Protein Homology CDS 166197 166958 . - 0 ID=cds-WP_000255008.1;Parent=gene-CCO34_RS13775;Dbxref=GenBank:WP_000255008.1;Name=WP_000255008.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=CCO34_RS13775;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 167190 168176 . + . ID=gene-CCO34_RS13780;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=CCO34_RS13780;old_locus_tag=CCO34_13775 NZ_NPMD01000005.1 Protein Homology CDS 167190 168176 . + 0 ID=cds-WP_000983126.1;Parent=gene-CCO34_RS13780;Dbxref=GenBank:WP_000983126.1;Name=WP_000983126.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=CCO34_RS13780;product=cell division protein ZipA;protein_id=WP_000983126.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 168248 170263 . + . ID=gene-CCO34_RS13785;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CCO34_RS13785;old_locus_tag=CCO34_13780 NZ_NPMD01000005.1 Protein Homology CDS 168248 170263 . + 0 ID=cds-WP_000433281.1;Parent=gene-CCO34_RS13785;Dbxref=GenBank:WP_000433281.1;Name=WP_000433281.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=CCO34_RS13785;product=NAD-dependent DNA ligase LigA;protein_id=WP_000433281.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 170265 170483 . + . ID=gene-CCO34_RS13790;Name=CCO34_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13790;old_locus_tag=CCO34_13785 NZ_NPMD01000005.1 Protein Homology CDS 170265 170483 . + 0 ID=cds-WP_001519708.1;Parent=gene-CCO34_RS13790;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=CCO34_RS13790;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 170480 171478 . - . ID=gene-CCO34_RS13795;Name=CCO34_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13795;old_locus_tag=CCO34_13790 NZ_NPMD01000005.1 Protein Homology CDS 170480 171478 . - 0 ID=cds-WP_000765569.1;Parent=gene-CCO34_RS13795;Dbxref=GenBank:WP_000765569.1;Name=WP_000765569.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=CCO34_RS13795;product=bile acid:sodium symporter family protein;protein_id=WP_000765569.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 171568 172494 . + . ID=gene-CCO34_RS13800;Name=CCO34_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13800;old_locus_tag=CCO34_13795 NZ_NPMD01000005.1 Protein Homology CDS 171568 172494 . + 0 ID=cds-WP_001109831.1;Parent=gene-CCO34_RS13800;Dbxref=GenBank:WP_001109831.1;Name=WP_001109831.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=CCO34_RS13800;product=LysR family transcriptional regulator;protein_id=WP_001109831.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 172556 173317 . - . ID=gene-CCO34_RS13805;Name=CCO34_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13805;old_locus_tag=CCO34_13800 NZ_NPMD01000005.1 Protein Homology CDS 172556 173317 . - 0 ID=cds-WP_000722930.1;Parent=gene-CCO34_RS13805;Dbxref=GenBank:WP_000722930.1;Name=WP_000722930.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=CCO34_RS13805;product=outer membrane protein OmpK;protein_id=WP_000722930.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 173573 174406 . + . ID=gene-CCO34_RS13810;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=CCO34_RS13810;old_locus_tag=CCO34_13805 NZ_NPMD01000005.1 Protein Homology CDS 173573 174406 . + 0 ID=cds-WP_001119742.1;Parent=gene-CCO34_RS13810;Dbxref=GenBank:WP_001119742.1;Name=WP_001119742.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=CCO34_RS13810;product=xanthosine phosphorylase;protein_id=WP_001119742.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 174461 175717 . + . ID=gene-CCO34_RS13815;Name=CCO34_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13815;old_locus_tag=CCO34_13810 NZ_NPMD01000005.1 Protein Homology CDS 174461 175717 . + 0 ID=cds-WP_094965460.1;Parent=gene-CCO34_RS13815;Dbxref=GenBank:WP_094965460.1;Name=WP_094965460.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=CCO34_RS13815;product=nucleoside permease;protein_id=WP_094965460.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 175776 175934 . + . ID=gene-CCO34_RS13820;Name=CCO34_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13820;old_locus_tag=CCO34_13815 NZ_NPMD01000005.1 Protein Homology CDS 175776 175934 . + 0 ID=cds-WP_000658727.1;Parent=gene-CCO34_RS13820;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=CCO34_RS13820;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 175986 176870 . + . ID=gene-CCO34_RS13825;Name=CCO34_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13825;old_locus_tag=CCO34_13820 NZ_NPMD01000005.1 Protein Homology CDS 175986 176870 . + 0 ID=cds-WP_000438890.1;Parent=gene-CCO34_RS13825;Dbxref=GenBank:WP_000438890.1;Name=WP_000438890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=CCO34_RS13825;product=LysR family transcriptional regulator;protein_id=WP_000438890.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 177034 177109 . - . ID=gene-CCO34_RS13830;Name=CCO34_RS13830;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS13830;old_locus_tag=CCO34_13825 NZ_NPMD01000005.1 tRNAscan-SE tRNA 177034 177109 . - . ID=rna-CCO34_RS13830;Parent=gene-CCO34_RS13830;anticodon=(pos:complement(177074..177076));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13830;product=tRNA-Lys NZ_NPMD01000005.1 tRNAscan-SE exon 177034 177109 . - . ID=exon-CCO34_RS13830-1;Parent=rna-CCO34_RS13830;anticodon=(pos:complement(177074..177076));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13830;product=tRNA-Lys NZ_NPMD01000005.1 RefSeq gene 177114 177189 . - . ID=gene-CCO34_RS13835;Name=CCO34_RS13835;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS13835;old_locus_tag=CCO34_13830 NZ_NPMD01000005.1 tRNAscan-SE tRNA 177114 177189 . - . ID=rna-CCO34_RS13835;Parent=gene-CCO34_RS13835;anticodon=(pos:complement(177154..177156));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13835;product=tRNA-Val NZ_NPMD01000005.1 tRNAscan-SE exon 177114 177189 . - . ID=exon-CCO34_RS13835-1;Parent=rna-CCO34_RS13835;anticodon=(pos:complement(177154..177156));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13835;product=tRNA-Val NZ_NPMD01000005.1 RefSeq gene 177231 177306 . - . ID=gene-CCO34_RS13840;Name=CCO34_RS13840;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS13840;old_locus_tag=CCO34_13835 NZ_NPMD01000005.1 tRNAscan-SE tRNA 177231 177306 . - . ID=rna-CCO34_RS13840;Parent=gene-CCO34_RS13840;anticodon=(pos:complement(177271..177273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13840;product=tRNA-Val NZ_NPMD01000005.1 tRNAscan-SE exon 177231 177306 . - . ID=exon-CCO34_RS13840-1;Parent=rna-CCO34_RS13840;anticodon=(pos:complement(177271..177273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13840;product=tRNA-Val NZ_NPMD01000005.1 RefSeq gene 177352 177427 . - . ID=gene-CCO34_RS13845;Name=CCO34_RS13845;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS13845;old_locus_tag=CCO34_13840 NZ_NPMD01000005.1 tRNAscan-SE tRNA 177352 177427 . - . ID=rna-CCO34_RS13845;Parent=gene-CCO34_RS13845;anticodon=(pos:complement(177392..177394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13845;product=tRNA-Val NZ_NPMD01000005.1 tRNAscan-SE exon 177352 177427 . - . ID=exon-CCO34_RS13845-1;Parent=rna-CCO34_RS13845;anticodon=(pos:complement(177392..177394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13845;product=tRNA-Val NZ_NPMD01000005.1 RefSeq gene 177686 179101 . + . ID=gene-CCO34_RS13850;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CCO34_RS13850;old_locus_tag=CCO34_13845 NZ_NPMD01000005.1 Protein Homology CDS 177686 179101 . + 0 ID=cds-WP_000695623.1;Parent=gene-CCO34_RS13850;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=CCO34_RS13850;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 179155 179547 . - . ID=gene-CCO34_RS13855;Name=CCO34_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13855;old_locus_tag=CCO34_13850 NZ_NPMD01000005.1 Protein Homology CDS 179155 179547 . - 0 ID=cds-WP_000826514.1;Parent=gene-CCO34_RS13855;Dbxref=GenBank:WP_000826514.1;Name=WP_000826514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=CCO34_RS13855;product=MerR family transcriptional regulator;protein_id=WP_000826514.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 179549 179911 . - . ID=gene-CCO34_RS13860;Name=CCO34_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13860;old_locus_tag=CCO34_13855 NZ_NPMD01000005.1 Protein Homology CDS 179549 179911 . - 0 ID=cds-WP_000472034.1;Parent=gene-CCO34_RS13860;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=CCO34_RS13860;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 180133 180208 . + . ID=gene-CCO34_RS13870;Name=CCO34_RS13870;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS13870;old_locus_tag=CCO34_13865 NZ_NPMD01000005.1 tRNAscan-SE tRNA 180133 180208 . + . ID=rna-CCO34_RS13870;Parent=gene-CCO34_RS13870;anticodon=(pos:180166..180168);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13870;product=tRNA-Ala NZ_NPMD01000005.1 tRNAscan-SE exon 180133 180208 . + . ID=exon-CCO34_RS13870-1;Parent=rna-CCO34_RS13870;anticodon=(pos:180166..180168);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13870;product=tRNA-Ala NZ_NPMD01000005.1 RefSeq gene 180251 180326 . + . ID=gene-CCO34_RS13875;Name=CCO34_RS13875;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS13875;old_locus_tag=CCO34_13870 NZ_NPMD01000005.1 tRNAscan-SE tRNA 180251 180326 . + . ID=rna-CCO34_RS13875;Parent=gene-CCO34_RS13875;anticodon=(pos:180284..180286);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13875;product=tRNA-Ala NZ_NPMD01000005.1 tRNAscan-SE exon 180251 180326 . + . ID=exon-CCO34_RS13875-1;Parent=rna-CCO34_RS13875;anticodon=(pos:180284..180286);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13875;product=tRNA-Ala NZ_NPMD01000005.1 RefSeq gene 180517 182706 . + . ID=gene-CCO34_RS13880;Name=CCO34_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13880;old_locus_tag=CCO34_13875 NZ_NPMD01000005.1 Protein Homology CDS 180517 182706 . + 0 ID=cds-WP_001112941.1;Parent=gene-CCO34_RS13880;Dbxref=GenBank:WP_001112941.1;Name=WP_001112941.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=CCO34_RS13880;product=EAL domain-containing protein;protein_id=WP_001112941.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 182759 183961 . - . ID=gene-CCO34_RS13885;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=CCO34_RS13885;old_locus_tag=CCO34_13880 NZ_NPMD01000005.1 Protein Homology CDS 182759 183961 . - 0 ID=cds-WP_000376347.1;Parent=gene-CCO34_RS13885;Dbxref=GenBank:WP_000376347.1;Name=WP_000376347.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=CCO34_RS13885;product=nucleoside permease NupC;protein_id=WP_000376347.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 184267 184311 . + . ID=gene-CCO34_RS26220;Name=CCO34_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26220 NZ_NPMD01000005.1 Protein Homology CDS 184267 184311 . + 0 ID=cds-WP_418338175.1;Parent=gene-CCO34_RS26220;Dbxref=GenBank:WP_418338175.1;Name=WP_418338175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=CCO34_RS26220;product=hypothetical protein;protein_id=WP_418338175.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 184304 185545 . + . ID=gene-CCO34_RS13890;Name=CCO34_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13890;old_locus_tag=CCO34_13885 NZ_NPMD01000005.1 Protein Homology CDS 184304 185545 . + 0 ID=cds-WP_000131734.1;Parent=gene-CCO34_RS13890;Dbxref=GenBank:WP_000131734.1;Name=WP_000131734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=CCO34_RS13890;product=Nramp family divalent metal transporter;protein_id=WP_000131734.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 185606 185932 . - . ID=gene-CCO34_RS13895;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=CCO34_RS13895;old_locus_tag=CCO34_13890 NZ_NPMD01000005.1 Protein Homology CDS 185606 185932 . - 0 ID=cds-WP_000490091.1;Parent=gene-CCO34_RS13895;Dbxref=GenBank:WP_000490091.1;Name=WP_000490091.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=CCO34_RS13895;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490091.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 186046 187044 . - . ID=gene-CCO34_RS13900;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CCO34_RS13900;old_locus_tag=CCO34_13895 NZ_NPMD01000005.1 Protein Homology CDS 186046 187044 . - 0 ID=cds-WP_000640293.1;Parent=gene-CCO34_RS13900;Dbxref=GenBank:WP_000640293.1;Name=WP_000640293.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=CCO34_RS13900;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000640293.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 187224 188876 . + . ID=gene-CCO34_RS13905;Name=CCO34_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13905;old_locus_tag=CCO34_13900 NZ_NPMD01000005.1 Protein Homology CDS 187224 188876 . + 0 ID=cds-WP_001180862.1;Parent=gene-CCO34_RS13905;Dbxref=GenBank:WP_001180862.1;Name=WP_001180862.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=CCO34_RS13905;product=alpha-keto acid decarboxylase family protein;protein_id=WP_001180862.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 188896 190131 . - . ID=gene-CCO34_RS13910;Name=CCO34_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13910;old_locus_tag=CCO34_13905 NZ_NPMD01000005.1 Protein Homology CDS 188896 190131 . - 0 ID=cds-WP_000468920.1;Parent=gene-CCO34_RS13910;Dbxref=GenBank:WP_000468920.1;Name=WP_000468920.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=CCO34_RS13910;product=ion channel protein;protein_id=WP_000468920.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 190335 191300 . + . ID=gene-CCO34_RS13915;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=CCO34_RS13915;old_locus_tag=CCO34_13910 NZ_NPMD01000005.1 Protein Homology CDS 190335 191300 . + 0 ID=cds-WP_000170380.1;Parent=gene-CCO34_RS13915;Dbxref=GenBank:WP_000170380.1;Name=WP_000170380.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=CCO34_RS13915;product=glucokinase;protein_id=WP_000170380.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 192023 193261 . + . ID=gene-CCO34_RS13925;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=CCO34_RS13925;old_locus_tag=CCO34_13920 NZ_NPMD01000005.1 Protein Homology CDS 192023 193261 . + 0 ID=cds-WP_000763117.1;Parent=gene-CCO34_RS13925;Dbxref=GenBank:WP_000763117.1;Name=WP_000763117.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=CCO34_RS13925;product=alanine transaminase;protein_id=WP_000763117.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 193311 193382 . - . ID=gene-CCO34_RS13930;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=CCO34_RS13930;old_locus_tag=CCO34_13925 NZ_NPMD01000005.1 Protein Homology CDS 193311 193382 . - 0 ID=cds-WP_010723117.1;Parent=gene-CCO34_RS13930;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=CCO34_RS13930;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 193785 194705 . - . ID=gene-CCO34_RS13935;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=CCO34_RS13935;old_locus_tag=CCO34_13930 NZ_NPMD01000005.1 Protein Homology CDS 193785 194705 . - 0 ID=cds-WP_000484431.1;Parent=gene-CCO34_RS13935;Dbxref=GenBank:WP_000484431.1;Name=WP_000484431.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=CCO34_RS13935;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484431.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 195227 195469 . + . ID=gene-CCO34_RS13940;Name=CCO34_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13940;old_locus_tag=CCO34_13935 NZ_NPMD01000005.1 Protein Homology CDS 195227 195469 . + 0 ID=cds-WP_000639889.1;Parent=gene-CCO34_RS13940;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=CCO34_RS13940;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 195744 197135 . - . ID=gene-CCO34_RS13950;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=CCO34_RS13950;old_locus_tag=CCO34_13945 NZ_NPMD01000005.1 Protein Homology CDS 195744 197135 . - 0 ID=cds-WP_000955746.1;Parent=gene-CCO34_RS13950;Dbxref=GenBank:WP_000955746.1;Name=WP_000955746.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=CCO34_RS13950;product=phosphoglycerate transporter PgtP;protein_id=WP_000955746.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 197571 198764 . + . ID=gene-CCO34_RS13960;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=CCO34_RS13960;old_locus_tag=CCO34_13955 NZ_NPMD01000005.1 Protein Homology CDS 197571 198764 . + 0 ID=cds-WP_000467983.1;Parent=gene-CCO34_RS13960;Dbxref=GenBank:WP_000467983.1;Name=WP_000467983.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=CCO34_RS13960;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467983.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 198761 200767 . + . ID=gene-CCO34_RS13965;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=CCO34_RS13965;old_locus_tag=CCO34_13960 NZ_NPMD01000005.1 Protein Homology CDS 198761 200767 . + 0 ID=cds-WP_000678492.1;Parent=gene-CCO34_RS13965;Dbxref=GenBank:WP_000678492.1;Name=WP_000678492.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=CCO34_RS13965;product=two-component system sensor histidine kinase PgtB;protein_id=WP_000678492.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 200757 202004 . + . ID=gene-CCO34_RS13970;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=CCO34_RS13970;old_locus_tag=CCO34_13965 NZ_NPMD01000005.1 Protein Homology CDS 200757 202004 . + 0 ID=cds-WP_000930843.1;Parent=gene-CCO34_RS13970;Dbxref=GenBank:WP_000930843.1;Name=WP_000930843.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=CCO34_RS13970;product=two-component system response regulator PgtA;protein_id=WP_000930843.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 202272 203210 . + . ID=gene-CCO34_RS13975;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=CCO34_RS13975;old_locus_tag=CCO34_13970 NZ_NPMD01000005.1 Protein Homology CDS 202272 203210 . + 0 ID=cds-WP_000716010.1;Parent=gene-CCO34_RS13975;Dbxref=GenBank:WP_000716010.1;Name=WP_000716010.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=CCO34_RS13975;product=omptin family outer membrane protease PgtE;protein_id=WP_000716010.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 203367 203441 . - . ID=gene-CCO34_RS13980;Name=CCO34_RS13980;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS13980;old_locus_tag=CCO34_13975 NZ_NPMD01000005.1 tRNAscan-SE tRNA 203367 203441 . - . ID=rna-CCO34_RS13980;Parent=gene-CCO34_RS13980;anticodon=(pos:complement(203406..203408));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13980;product=tRNA-Arg NZ_NPMD01000005.1 tRNAscan-SE exon 203367 203441 . - . ID=exon-CCO34_RS13980-1;Parent=rna-CCO34_RS13980;anticodon=(pos:complement(203406..203408));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS13980;product=tRNA-Arg NZ_NPMD01000005.1 RefSeq gene 203517 204458 . - . ID=gene-CCO34_RS13985;Name=CCO34_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS13985;old_locus_tag=CCO34_13980 NZ_NPMD01000005.1 Protein Homology CDS 203517 204458 . - 0 ID=cds-WP_000377777.1;Parent=gene-CCO34_RS13985;Dbxref=GenBank:WP_000377777.1;Name=WP_000377777.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=CCO34_RS13985;product=formate/nitrite transporter family protein;protein_id=WP_000377777.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 204747 205502 . + . ID=gene-CCO34_RS13990;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=CCO34_RS13990;old_locus_tag=CCO34_13985 NZ_NPMD01000005.1 Protein Homology CDS 204747 205502 . + 0 ID=cds-WP_000776787.1;Parent=gene-CCO34_RS13990;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=CCO34_RS13990;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 205563 206870 . - . ID=gene-CCO34_RS13995;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=CCO34_RS13995;old_locus_tag=CCO34_13990 NZ_NPMD01000005.1 Protein Homology CDS 205563 206870 . - 0 ID=cds-WP_001518618.1;Parent=gene-CCO34_RS13995;Dbxref=GenBank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=CCO34_RS13995;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 207242 207526 . + . ID=gene-CCO34_RS14000;Name=CCO34_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14000;old_locus_tag=CCO34_13995 NZ_NPMD01000005.1 Protein Homology CDS 207242 207526 . + 0 ID=cds-WP_000030904.1;Parent=gene-CCO34_RS14000;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=CCO34_RS14000;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 207705 209015 . + . ID=gene-CCO34_RS14005;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=CCO34_RS14005;old_locus_tag=CCO34_14000 NZ_NPMD01000005.1 Protein Homology CDS 207705 209015 . + 0 ID=cds-WP_001248115.1;Parent=gene-CCO34_RS14005;Dbxref=GenBank:WP_001248115.1;Name=WP_001248115.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=CCO34_RS14005;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_001248115.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 209015 211162 . + . ID=gene-CCO34_RS14010;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=CCO34_RS14010;old_locus_tag=CCO34_14005 NZ_NPMD01000005.1 Protein Homology CDS 209015 211162 . + 0 ID=cds-WP_000214140.1;Parent=gene-CCO34_RS14010;Dbxref=GenBank:WP_000214140.1;Name=WP_000214140.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=CCO34_RS14010;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000214140.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 211371 211856 . + . ID=gene-CCO34_RS14015;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=CCO34_RS14015;old_locus_tag=CCO34_14010 NZ_NPMD01000005.1 Protein Homology CDS 211371 211856 . + 0 ID=cds-WP_001195799.1;Parent=gene-CCO34_RS14015;Dbxref=GenBank:WP_001195799.1;Name=WP_001195799.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=CCO34_RS14015;product=phosphohistidine phosphatase SixA;protein_id=WP_001195799.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 211956 212507 . - . ID=gene-CCO34_RS14020;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=CCO34_RS14020;old_locus_tag=CCO34_14015 NZ_NPMD01000005.1 Protein Homology CDS 211956 212507 . - 0 ID=cds-WP_000730794.1;Parent=gene-CCO34_RS14020;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=CCO34_RS14020;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 212673 213605 . + . ID=gene-CCO34_RS14025;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=CCO34_RS14025;old_locus_tag=CCO34_14020 NZ_NPMD01000005.1 Protein Homology CDS 212673 213605 . + 0 ID=cds-WP_001542329.1;Parent=gene-CCO34_RS14025;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=CCO34_RS14025;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 213641 214726 . + . ID=gene-CCO34_RS14030;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CCO34_RS14030;old_locus_tag=CCO34_14025 NZ_NPMD01000005.1 Protein Homology CDS 213641 214726 . + 0 ID=cds-WP_000918456.1;Parent=gene-CCO34_RS14030;Dbxref=GenBank:WP_000918456.1;Name=WP_000918456.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=CCO34_RS14030;product=chorismate synthase;protein_id=WP_000918456.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 214730 215554 . + . ID=gene-CCO34_RS14035;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=CCO34_RS14035;old_locus_tag=CCO34_14030 NZ_NPMD01000005.1 Protein Homology CDS 214730 215554 . + 0 ID=cds-WP_000750425.1;Parent=gene-CCO34_RS14035;Dbxref=GenBank:WP_000750425.1;Name=WP_000750425.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=CCO34_RS14035;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750425.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 215554 216363 . + . ID=gene-CCO34_RS14040;Name=CCO34_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14040;old_locus_tag=CCO34_14035 NZ_NPMD01000005.1 Protein Homology CDS 215554 216363 . + 0 ID=cds-WP_000368599.1;Parent=gene-CCO34_RS14040;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=CCO34_RS14040;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 216363 216911 . + . ID=gene-CCO34_RS14045;Name=CCO34_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14045;old_locus_tag=CCO34_14040 NZ_NPMD01000005.1 Protein Homology CDS 216363 216911 . + 0 ID=cds-WP_001066345.1;Parent=gene-CCO34_RS14045;Dbxref=GenBank:WP_001066345.1;Name=WP_001066345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=CCO34_RS14045;product=elongation factor P hydroxylase;protein_id=WP_001066345.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 216944 217219 . + . ID=gene-CCO34_RS14050;Name=CCO34_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14050;old_locus_tag=CCO34_14045 NZ_NPMD01000005.1 Protein Homology CDS 216944 217219 . + 0 ID=cds-WP_000559749.1;Parent=gene-CCO34_RS14050;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=CCO34_RS14050;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 217271 219271 . - . ID=gene-CCO34_RS14055;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=CCO34_RS14055;old_locus_tag=CCO34_14050 NZ_NPMD01000005.1 Protein Homology CDS 217271 219271 . - 0 ID=cds-WP_000816105.1;Parent=gene-CCO34_RS14055;Dbxref=GenBank:WP_000816105.1;Name=WP_000816105.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=CCO34_RS14055;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_000816105.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 219431 220645 . + . ID=gene-CCO34_RS14060;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=CCO34_RS14060;old_locus_tag=CCO34_14055 NZ_NPMD01000005.1 Protein Homology CDS 219431 220645 . + 0 ID=cds-WP_000817161.1;Parent=gene-CCO34_RS14060;Dbxref=GenBank:WP_000817161.1;Name=WP_000817161.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=CCO34_RS14060;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817161.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 220743 221399 . + . ID=gene-CCO34_RS14065;Name=CCO34_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14065;old_locus_tag=CCO34_14060 NZ_NPMD01000005.1 Protein Homology CDS 220743 221399 . + 0 ID=cds-WP_001142906.1;Parent=gene-CCO34_RS14065;Dbxref=GenBank:WP_001142906.1;Name=WP_001142906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=CCO34_RS14065;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142906.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 221466 221984 . - . ID=gene-CCO34_RS14070;Name=CCO34_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14070;old_locus_tag=CCO34_14065 NZ_NPMD01000005.1 Protein Homology CDS 221466 221984 . - 0 ID=cds-WP_000847548.1;Parent=gene-CCO34_RS14070;Dbxref=GenBank:WP_000847548.1;Name=WP_000847548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=CCO34_RS14070;product=YbjP/YqhG family protein;protein_id=WP_000847548.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 221984 222352 . - . ID=gene-CCO34_RS14075;Name=CCO34_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14075;old_locus_tag=CCO34_14070 NZ_NPMD01000005.1 Protein Homology CDS 221984 222352 . - 0 ID=cds-WP_000118257.1;Parent=gene-CCO34_RS14075;Dbxref=GenBank:WP_000118257.1;Name=WP_000118257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=CCO34_RS14075;product=NlpC/P60 family protein;protein_id=WP_000118257.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 222521 222769 . - . ID=gene-CCO34_RS14080;Name=CCO34_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14080;old_locus_tag=CCO34_14075 NZ_NPMD01000005.1 Protein Homology CDS 222521 222769 . - 0 ID=cds-WP_000433426.1;Parent=gene-CCO34_RS14080;Dbxref=GenBank:WP_000433426.1;Name=WP_000433426.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=CCO34_RS14080;product=helix-turn-helix domain-containing protein;protein_id=WP_000433426.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 222942 223316 . + . ID=gene-CCO34_RS14085;Name=CCO34_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14085;old_locus_tag=CCO34_14080 NZ_NPMD01000005.1 Protein Homology CDS 222942 223316 . + 0 ID=cds-WP_001051266.1;Parent=gene-CCO34_RS14085;Dbxref=GenBank:WP_001051266.1;Name=WP_001051266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=CCO34_RS14085;product=hypothetical protein;protein_id=WP_001051266.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 223496 224674 . + . ID=gene-CCO34_RS14090;Name=CCO34_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14090;old_locus_tag=CCO34_14085 NZ_NPMD01000005.1 Protein Homology CDS 223496 224674 . + 0 ID=cds-WP_000127728.1;Parent=gene-CCO34_RS14090;Dbxref=GenBank:WP_000127728.1;Name=WP_000127728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=CCO34_RS14090;product=MFS transporter;protein_id=WP_000127728.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 224671 225672 . - . ID=gene-CCO34_RS14095;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=CCO34_RS14095;old_locus_tag=CCO34_14090 NZ_NPMD01000005.1 Protein Homology CDS 224671 225672 . - 0 ID=cds-WP_000553397.1;Parent=gene-CCO34_RS14095;Dbxref=GenBank:WP_000553397.1;Name=WP_000553397.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=CCO34_RS14095;product=flagella biosynthesis regulator Flk;protein_id=WP_000553397.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 225776 226912 . + . ID=gene-CCO34_RS14100;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=CCO34_RS14100;old_locus_tag=CCO34_14095 NZ_NPMD01000005.1 Protein Homology CDS 225776 226912 . + 0 ID=cds-WP_000699178.1;Parent=gene-CCO34_RS14100;Dbxref=GenBank:WP_000699178.1;Name=WP_000699178.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=CCO34_RS14100;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699178.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 226980 227993 . + . ID=gene-CCO34_RS14105;Name=CCO34_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14105;old_locus_tag=CCO34_14100 NZ_NPMD01000005.1 Protein Homology CDS 226980 227993 . + 0 ID=cds-WP_001289141.1;Parent=gene-CCO34_RS14105;Dbxref=GenBank:WP_001289141.1;Name=WP_001289141.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=CCO34_RS14105;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289141.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 227993 228805 . + . ID=gene-CCO34_RS14110;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CCO34_RS14110;old_locus_tag=CCO34_14105 NZ_NPMD01000005.1 Protein Homology CDS 227993 228805 . + 0 ID=cds-WP_000016626.1;Parent=gene-CCO34_RS14110;Dbxref=GenBank:WP_000016626.1;Name=WP_000016626.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=CCO34_RS14110;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016626.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 228854 229513 . + . ID=gene-CCO34_RS14115;Name=CCO34_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14115;old_locus_tag=CCO34_14110 NZ_NPMD01000005.1 Protein Homology CDS 228854 229513 . + 0 ID=cds-WP_000364318.1;Parent=gene-CCO34_RS14115;Dbxref=GenBank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=CCO34_RS14115;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 229663 230577 . + . ID=gene-CCO34_RS14120;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CCO34_RS14120;old_locus_tag=CCO34_14115 NZ_NPMD01000005.1 Protein Homology CDS 229663 230577 . + 0 ID=cds-WP_000118383.1;Parent=gene-CCO34_RS14120;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=CCO34_RS14120;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 230645 231913 . + . ID=gene-CCO34_RS14125;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=CCO34_RS14125;old_locus_tag=CCO34_14120 NZ_NPMD01000005.1 Protein Homology CDS 230645 231913 . + 0 ID=cds-WP_000792276.1;Parent=gene-CCO34_RS14125;Dbxref=GenBank:WP_000792276.1;Name=WP_000792276.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=CCO34_RS14125;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000792276.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 231903 232577 . + . ID=gene-CCO34_RS14130;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=CCO34_RS14130;old_locus_tag=CCO34_14125 NZ_NPMD01000005.1 Protein Homology CDS 231903 232577 . + 0 ID=cds-WP_000157036.1;Parent=gene-CCO34_RS14130;Dbxref=GenBank:WP_000157036.1;Name=WP_000157036.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=CCO34_RS14130;product=cell division protein DedD;protein_id=WP_000157036.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 232889 233377 . + . ID=gene-CCO34_RS14135;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=CCO34_RS14135;old_locus_tag=CCO34_14130 NZ_NPMD01000005.1 Protein Homology CDS 232889 233377 . + 0 ID=cds-WP_000262102.1;Parent=gene-CCO34_RS14135;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=CCO34_RS14135;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 233415 234932 . + . ID=gene-CCO34_RS14140;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CCO34_RS14140;old_locus_tag=CCO34_14135 NZ_NPMD01000005.1 Protein Homology CDS 233415 234932 . + 0 ID=cds-WP_000334205.1;Parent=gene-CCO34_RS14140;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=CCO34_RS14140;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 234968 236395 . - . ID=gene-CCO34_RS14145;Name=CCO34_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14145;old_locus_tag=CCO34_14140 NZ_NPMD01000005.1 Protein Homology CDS 234968 236395 . - 0 ID=cds-WP_000168925.1;Parent=gene-CCO34_RS14145;Dbxref=GenBank:WP_000168925.1;Name=WP_000168925.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=CCO34_RS14145;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168925.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 236606 238003 . + . ID=gene-CCO34_RS14150;Name=CCO34_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14150;old_locus_tag=CCO34_14145 NZ_NPMD01000005.1 Protein Homology CDS 236606 238003 . + 0 ID=cds-WP_000132301.1;Parent=gene-CCO34_RS14150;Dbxref=GenBank:WP_000132301.1;Name=WP_000132301.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=CCO34_RS14150;product=diaminopimelate decarboxylase family protein;protein_id=WP_000132301.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 238094 239515 . + . ID=gene-CCO34_RS14155;Name=CCO34_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14155;old_locus_tag=CCO34_14150 NZ_NPMD01000005.1 Protein Homology CDS 238094 239515 . + 0 ID=cds-WP_000072512.1;Parent=gene-CCO34_RS14155;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=CCO34_RS14155;product=APC family permease;protein_id=WP_000072512.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 239517 240620 . + . ID=gene-CCO34_RS14160;Name=CCO34_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14160;old_locus_tag=CCO34_14155 NZ_NPMD01000005.1 Protein Homology CDS 239517 240620 . + 0 ID=cds-WP_000281907.1;Parent=gene-CCO34_RS14160;Dbxref=GenBank:WP_000281907.1;Name=WP_000281907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=CCO34_RS14160;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281907.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 240684 242090 . + . ID=gene-CCO34_RS14165;Name=CCO34_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14165;old_locus_tag=CCO34_14160 NZ_NPMD01000005.1 Protein Homology CDS 240684 242090 . + 0 ID=cds-WP_000380346.1;Parent=gene-CCO34_RS14165;Dbxref=GenBank:WP_000380346.1;Name=WP_000380346.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=CCO34_RS14165;product=amino acid permease;protein_id=WP_000380346.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 242117 242686 . + . ID=gene-CCO34_RS14170;Name=CCO34_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14170;old_locus_tag=CCO34_14165 NZ_NPMD01000005.1 Protein Homology CDS 242117 242686 . + 0 ID=cds-WP_000825682.1;Parent=gene-CCO34_RS14170;Dbxref=GenBank:WP_000825682.1;Name=WP_000825682.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=CCO34_RS14170;product=UbiX family flavin prenyltransferase;protein_id=WP_000825682.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 242975 243757 . + . ID=gene-CCO34_RS14180;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=CCO34_RS14180;old_locus_tag=CCO34_14175 NZ_NPMD01000005.1 Protein Homology CDS 242975 243757 . + 0 ID=cds-WP_000754423.1;Parent=gene-CCO34_RS14180;Dbxref=GenBank:WP_000754423.1;Name=WP_000754423.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=CCO34_RS14180;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754423.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 243995 244777 . + . ID=gene-CCO34_RS14185;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=CCO34_RS14185;old_locus_tag=CCO34_14180 NZ_NPMD01000005.1 Protein Homology CDS 243995 244777 . + 0 ID=cds-WP_000731868.1;Parent=gene-CCO34_RS14185;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=CCO34_RS14185;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 244958 245644 . + . ID=gene-CCO34_RS14190;Name=CCO34_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14190;old_locus_tag=CCO34_14185 NZ_NPMD01000005.1 Protein Homology CDS 244958 245644 . + 0 ID=cds-WP_000965498.1;Parent=gene-CCO34_RS14190;Dbxref=GenBank:WP_000965498.1;Name=WP_000965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=CCO34_RS14190;product=histidine ABC transporter permease HisQ;protein_id=WP_000965498.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 245641 246348 . + . ID=gene-CCO34_RS14195;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=CCO34_RS14195;old_locus_tag=CCO34_14190 NZ_NPMD01000005.1 Protein Homology CDS 245641 246348 . + 0 ID=cds-WP_000569771.1;Parent=gene-CCO34_RS14195;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=CCO34_RS14195;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 246362 247135 . + . ID=gene-CCO34_RS14200;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=CCO34_RS14200;old_locus_tag=CCO34_14195 NZ_NPMD01000005.1 Protein Homology CDS 246362 247135 . + 0 ID=cds-WP_001293591.1;Parent=gene-CCO34_RS14200;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=CCO34_RS14200;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 247187 248080 . - . ID=gene-CCO34_RS14205;Name=CCO34_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14205;old_locus_tag=CCO34_14200 NZ_NPMD01000005.1 Protein Homology CDS 247187 248080 . - 0 ID=cds-WP_001166275.1;Parent=gene-CCO34_RS14205;Dbxref=GenBank:WP_001166275.1;Name=WP_001166275.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=CCO34_RS14205;product=TIGR01777 family oxidoreductase;protein_id=WP_001166275.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 248206 248853 . - . ID=gene-CCO34_RS14210;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=CCO34_RS14210;old_locus_tag=CCO34_14205 NZ_NPMD01000005.1 Protein Homology CDS 248206 248853 . - 0 ID=cds-WP_000566563.1;Parent=gene-CCO34_RS14210;Dbxref=GenBank:WP_000566563.1;Name=WP_000566563.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=CCO34_RS14210;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566563.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 248996 249640 . + . ID=gene-CCO34_RS14215;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=CCO34_RS14215;old_locus_tag=CCO34_14210 NZ_NPMD01000005.1 Protein Homology CDS 248996 249640 . + 0 ID=cds-WP_000043010.1;Parent=gene-CCO34_RS14215;Dbxref=GenBank:WP_000043010.1;Name=WP_000043010.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=CCO34_RS14215;product=glutathione transferase;protein_id=WP_000043010.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 249696 250247 . + . ID=gene-CCO34_RS14220;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=CCO34_RS14220;old_locus_tag=CCO34_14215 NZ_NPMD01000005.1 Protein Homology CDS 249696 250247 . + 0 ID=cds-WP_000772458.1;Parent=gene-CCO34_RS14220;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=CCO34_RS14220;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 250304 250858 . + . ID=gene-CCO34_RS14225;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=CCO34_RS14225;old_locus_tag=CCO34_14220 NZ_NPMD01000005.1 Protein Homology CDS 250304 250858 . + 0 ID=cds-WP_000230217.1;Parent=gene-CCO34_RS14225;Dbxref=GenBank:WP_000230217.1;Name=WP_000230217.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=CCO34_RS14225;product=NUDIX hydrolase YfcD;protein_id=WP_000230217.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 250864 251883 . - . ID=gene-CCO34_RS14230;Name=CCO34_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14230;old_locus_tag=CCO34_14225 NZ_NPMD01000005.1 Protein Homology CDS 250864 251883 . - 0 ID=cds-WP_000026955.1;Parent=gene-CCO34_RS14230;Dbxref=GenBank:WP_000026955.1;Name=WP_000026955.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=CCO34_RS14230;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026955.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 252136 252579 . + . ID=gene-CCO34_RS14240;Name=CCO34_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14240;old_locus_tag=CCO34_14235 NZ_NPMD01000005.1 Protein Homology CDS 252136 252579 . + 0 ID=cds-WP_000901810.1;Parent=gene-CCO34_RS14240;Dbxref=GenBank:WP_000901810.1;Name=WP_000901810.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=CCO34_RS14240;product=PTS sugar transporter subunit IIA;protein_id=WP_000901810.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 252660 252932 . + . ID=gene-CCO34_RS14245;Name=CCO34_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14245;old_locus_tag=CCO34_14240 NZ_NPMD01000005.1 Protein Homology CDS 252660 252932 . + 0 ID=cds-WP_000699818.1;Parent=gene-CCO34_RS14245;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=CCO34_RS14245;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 252953 254344 . + . ID=gene-CCO34_RS14250;Name=CCO34_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14250;old_locus_tag=CCO34_14245 NZ_NPMD01000005.1 Protein Homology CDS 252953 254344 . + 0 ID=cds-WP_001522266.1;Parent=gene-CCO34_RS14250;Dbxref=GenBank:WP_001522266.1;Name=WP_001522266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=CCO34_RS14250;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001522266.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 254341 255171 . + . ID=gene-CCO34_RS14255;Name=CCO34_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14255;old_locus_tag=CCO34_14250 NZ_NPMD01000005.1 Protein Homology CDS 254341 255171 . + 0 ID=cds-WP_001103265.1;Parent=gene-CCO34_RS14255;Dbxref=GenBank:WP_001103265.1;Name=WP_001103265.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=CCO34_RS14255;product=transketolase;protein_id=WP_001103265.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 255164 256117 . + . ID=gene-CCO34_RS14260;Name=CCO34_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14260;old_locus_tag=CCO34_14255 NZ_NPMD01000005.1 Protein Homology CDS 255164 256117 . + 0 ID=cds-WP_000593016.1;Parent=gene-CCO34_RS14260;Dbxref=GenBank:WP_000593016.1;Name=WP_000593016.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=CCO34_RS14260;product=transketolase family protein;protein_id=WP_000593016.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 256166 257686 . - . ID=gene-CCO34_RS14265;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=CCO34_RS14265;old_locus_tag=CCO34_14260 NZ_NPMD01000005.1 Protein Homology CDS 256166 257686 . - 0 ID=cds-WP_000117932.1;Parent=gene-CCO34_RS14265;Dbxref=GenBank:WP_000117932.1;Name=WP_000117932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=CCO34_RS14265;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117932.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 257904 260048 . - . ID=gene-CCO34_RS14270;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO34_RS14270;old_locus_tag=CCO34_14265 NZ_NPMD01000005.1 Protein Homology CDS 257904 260048 . - 0 ID=cds-WP_000086692.1;Parent=gene-CCO34_RS14270;Dbxref=GenBank:WP_000086692.1;Name=WP_000086692.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=CCO34_RS14270;product=phosphate acetyltransferase;protein_id=WP_000086692.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 260125 261327 . - . ID=gene-CCO34_RS14275;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=CCO34_RS14275;old_locus_tag=CCO34_14270 NZ_NPMD01000005.1 Protein Homology CDS 260125 261327 . - 0 ID=cds-WP_000095689.1;Parent=gene-CCO34_RS14275;Dbxref=GenBank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=CCO34_RS14275;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 261667 262122 . + . ID=gene-CCO34_RS14280;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=CCO34_RS14280;old_locus_tag=CCO34_14275 NZ_NPMD01000005.1 Protein Homology CDS 261667 262122 . + 0 ID=cds-WP_000106617.1;Parent=gene-CCO34_RS14280;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=CCO34_RS14280;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 262205 262699 . + . ID=gene-CCO34_RS14285;Name=CCO34_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14285;old_locus_tag=CCO34_14280 NZ_NPMD01000005.1 Protein Homology CDS 262205 262699 . + 0 ID=cds-WP_000426135.1;Parent=gene-CCO34_RS14285;Dbxref=GenBank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=CCO34_RS14285;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 262692 263369 . + . ID=gene-CCO34_RS14290;Name=CCO34_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14290;old_locus_tag=CCO34_14285 NZ_NPMD01000005.1 Protein Homology CDS 262692 263369 . + 0 ID=cds-WP_077906060.1;Parent=gene-CCO34_RS14290;Dbxref=GenBank:WP_077906060.1;Name=WP_077906060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=CCO34_RS14290;product=sugar phosphatase;protein_id=WP_077906060.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 263446 265272 . + . ID=gene-CCO34_RS14295;Name=CCO34_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14295;old_locus_tag=CCO34_14290 NZ_NPMD01000005.1 Protein Homology CDS 263446 265272 . + 0 ID=cds-WP_001012856.1;Parent=gene-CCO34_RS14295;Dbxref=GenBank:WP_001012856.1;Name=WP_001012856.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=CCO34_RS14295;product=SLC13 family permease;protein_id=WP_001012856.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 265364 265963 . - . ID=gene-CCO34_RS14300;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=CCO34_RS14300;old_locus_tag=CCO34_14295 NZ_NPMD01000005.1 Protein Homology CDS 265364 265963 . - 0 ID=cds-WP_000813882.1;Parent=gene-CCO34_RS14300;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=CCO34_RS14300;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 266057 267271 . - . ID=gene-CCO34_RS14305;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=CCO34_RS14305;old_locus_tag=CCO34_14300 NZ_NPMD01000005.1 Protein Homology CDS 266057 267271 . - 0 ID=cds-WP_000074540.1;Parent=gene-CCO34_RS14305;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=CCO34_RS14305;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 268203 269141 . + . ID=gene-CCO34_RS14315;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=CCO34_RS14315;old_locus_tag=CCO34_14310 NZ_NPMD01000005.1 Protein Homology CDS 268203 269141 . + 0 ID=cds-WP_000606288.1;Parent=gene-CCO34_RS14315;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=CCO34_RS14315;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 269221 269373 . + . ID=gene-CCO34_RS14320;Name=CCO34_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14320;old_locus_tag=CCO34_14315 NZ_NPMD01000005.1 Protein Homology CDS 269221 269373 . + 0 ID=cds-WP_001522276.1;Parent=gene-CCO34_RS14320;Dbxref=GenBank:WP_001522276.1;Name=WP_001522276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=CCO34_RS14320;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001522276.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 269768 270211 . + . ID=gene-CCO34_RS14325;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=CCO34_RS14325;old_locus_tag=CCO34_14320 NZ_NPMD01000005.1 Protein Homology CDS 269768 270211 . + 0 ID=cds-WP_000062993.1;Parent=gene-CCO34_RS14325;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=CCO34_RS14325;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 270227 270889 . + . ID=gene-CCO34_RS14330;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=CCO34_RS14330;old_locus_tag=CCO34_14325 NZ_NPMD01000005.1 Protein Homology CDS 270227 270889 . + 0 ID=cds-WP_000386728.1;Parent=gene-CCO34_RS14330;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=CCO34_RS14330;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 270976 272778 . + . ID=gene-CCO34_RS14335;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=CCO34_RS14335;old_locus_tag=CCO34_14330 NZ_NPMD01000005.1 Protein Homology CDS 270976 272778 . + 0 ID=cds-WP_000247855.1;Parent=gene-CCO34_RS14335;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=CCO34_RS14335;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 272781 273281 . + . ID=gene-CCO34_RS14340;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=CCO34_RS14340;old_locus_tag=CCO34_14335 NZ_NPMD01000005.1 Protein Homology CDS 272781 273281 . + 0 ID=cds-WP_000545038.1;Parent=gene-CCO34_RS14340;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=CCO34_RS14340;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 273278 274615 . + . ID=gene-CCO34_RS14345;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=CCO34_RS14345;old_locus_tag=CCO34_14340 NZ_NPMD01000005.1 Protein Homology CDS 273278 274615 . + 0 ID=cds-WP_000800048.1;Parent=gene-CCO34_RS14345;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=CCO34_RS14345;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 274646 277372 . + . ID=gene-CCO34_RS14350;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=CCO34_RS14350;old_locus_tag=CCO34_14345 NZ_NPMD01000005.1 Protein Homology CDS 274646 277372 . + 0 ID=cds-WP_001518099.1;Parent=gene-CCO34_RS14350;Dbxref=GenBank:WP_001518099.1;Name=WP_001518099.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=CCO34_RS14350;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001518099.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 277369 278346 . + . ID=gene-CCO34_RS14355;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=CCO34_RS14355;old_locus_tag=CCO34_14350 NZ_NPMD01000005.1 Protein Homology CDS 277369 278346 . + 0 ID=cds-WP_000118515.1;Parent=gene-CCO34_RS14355;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=CCO34_RS14355;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 278361 278903 . + . ID=gene-CCO34_RS14360;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=CCO34_RS14360;old_locus_tag=CCO34_14355 NZ_NPMD01000005.1 Protein Homology CDS 278361 278903 . + 0 ID=cds-WP_000172747.1;Parent=gene-CCO34_RS14360;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=CCO34_RS14360;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 278914 279468 . + . ID=gene-CCO34_RS14365;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=CCO34_RS14365;old_locus_tag=CCO34_14360 NZ_NPMD01000005.1 Protein Homology CDS 278914 279468 . + 0 ID=cds-WP_000393522.1;Parent=gene-CCO34_RS14365;Dbxref=GenBank:WP_000393522.1;Name=WP_000393522.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=CCO34_RS14365;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 279465 279767 . + . ID=gene-CCO34_RS14370;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=CCO34_RS14370;old_locus_tag=CCO34_14365 NZ_NPMD01000005.1 Protein Homology CDS 279465 279767 . + 0 ID=cds-WP_000612687.1;Parent=gene-CCO34_RS14370;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=CCO34_RS14370;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 279764 281605 . + . ID=gene-CCO34_RS14375;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=CCO34_RS14375;old_locus_tag=CCO34_14370 NZ_NPMD01000005.1 Protein Homology CDS 279764 281605 . + 0 ID=cds-WP_001056573.1;Parent=gene-CCO34_RS14375;Dbxref=GenBank:WP_001056573.1;Name=WP_001056573.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=CCO34_RS14375;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056573.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 281682 283211 . + . ID=gene-CCO34_RS14380;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=CCO34_RS14380;old_locus_tag=CCO34_14375 NZ_NPMD01000005.1 Protein Homology CDS 281682 283211 . + 0 ID=cds-WP_000926428.1;Parent=gene-CCO34_RS14380;Dbxref=GenBank:WP_000926428.1;Name=WP_000926428.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=CCO34_RS14380;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926428.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 283218 284675 . + . ID=gene-CCO34_RS14385;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=CCO34_RS14385;old_locus_tag=CCO34_14380 NZ_NPMD01000005.1 Protein Homology CDS 283218 284675 . + 0 ID=cds-WP_000156669.1;Parent=gene-CCO34_RS14385;Dbxref=GenBank:WP_000156669.1;Name=WP_000156669.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=CCO34_RS14385;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156669.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 284816 285820 . - . ID=gene-CCO34_RS14390;Name=CCO34_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14390;old_locus_tag=CCO34_14385 NZ_NPMD01000005.1 Protein Homology CDS 284816 285820 . - 0 ID=cds-WP_000368564.1;Parent=gene-CCO34_RS14390;Dbxref=GenBank:WP_000368564.1;Name=WP_000368564.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131502.1;locus_tag=CCO34_RS14390;product=chemotaxis protein;protein_id=WP_000368564.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 285886 286803 . - . ID=gene-CCO34_RS14395;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=CCO34_RS14395;old_locus_tag=CCO34_14390 NZ_NPMD01000005.1 Protein Homology CDS 285886 286803 . - 0 ID=cds-WP_000419093.1;Parent=gene-CCO34_RS14395;Dbxref=GenBank:WP_000419093.1;Name=WP_000419093.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=CCO34_RS14395;product=ribonuclease BN;protein_id=WP_000419093.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 286864 287325 . + . ID=gene-CCO34_RS14400;Name=CCO34_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14400;old_locus_tag=CCO34_14395 NZ_NPMD01000005.1 Protein Homology CDS 286864 287325 . + 0 ID=cds-WP_000568157.1;Parent=gene-CCO34_RS14400;Dbxref=GenBank:WP_000568157.1;Name=WP_000568157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=CCO34_RS14400;product=GNAT family N-acetyltransferase;protein_id=WP_000568157.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 287380 287685 . + . ID=gene-CCO34_RS14405;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=CCO34_RS14405;old_locus_tag=CCO34_14400 NZ_NPMD01000005.1 Protein Homology CDS 287380 287685 . + 0 ID=cds-WP_001522308.1;Parent=gene-CCO34_RS14405;Dbxref=GenBank:WP_001522308.1;Name=WP_001522308.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=CCO34_RS14405;product=stress response protein ElaB;protein_id=WP_001522308.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 287786 289081 . + . ID=gene-CCO34_RS14410;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=CCO34_RS14410;old_locus_tag=CCO34_14405 NZ_NPMD01000005.1 Protein Homology CDS 287786 289081 . + 0 ID=cds-WP_000555674.1;Parent=gene-CCO34_RS14410;Dbxref=GenBank:WP_000555674.1;Name=WP_000555674.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=CCO34_RS14410;product=isochorismate synthase MenF;protein_id=WP_000555674.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 289167 290837 . + . ID=gene-CCO34_RS14415;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CCO34_RS14415;old_locus_tag=CCO34_14410 NZ_NPMD01000005.1 Protein Homology CDS 289167 290837 . + 0 ID=cds-WP_000116391.1;Parent=gene-CCO34_RS14415;Dbxref=GenBank:WP_000116391.1;Name=WP_000116391.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=CCO34_RS14415;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116391.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 290834 291592 . + . ID=gene-CCO34_RS14420;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CCO34_RS14420;old_locus_tag=CCO34_14415 NZ_NPMD01000005.1 Protein Homology CDS 290834 291592 . + 0 ID=cds-WP_000979137.1;Parent=gene-CCO34_RS14420;Dbxref=GenBank:WP_000979137.1;Name=WP_000979137.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=CCO34_RS14420;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000979137.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 291607 292464 . + . ID=gene-CCO34_RS14425;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CCO34_RS14425;old_locus_tag=CCO34_14420 NZ_NPMD01000005.1 Protein Homology CDS 291607 292464 . + 0 ID=cds-WP_000640013.1;Parent=gene-CCO34_RS14425;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=CCO34_RS14425;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 292464 293426 . + . ID=gene-CCO34_RS14430;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CCO34_RS14430;old_locus_tag=CCO34_14425 NZ_NPMD01000005.1 Protein Homology CDS 292464 293426 . + 0 ID=cds-WP_001255561.1;Parent=gene-CCO34_RS14430;Dbxref=GenBank:WP_001255561.1;Name=WP_001255561.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=CCO34_RS14430;product=o-succinylbenzoate synthase;protein_id=WP_001255561.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 293423 294790 . + . ID=gene-CCO34_RS14435;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CCO34_RS14435;old_locus_tag=CCO34_14430 NZ_NPMD01000005.1 Protein Homology CDS 293423 294790 . + 0 ID=cds-WP_064035078.1;Parent=gene-CCO34_RS14435;Dbxref=GenBank:WP_064035078.1;Name=WP_064035078.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=CCO34_RS14435;product=o-succinylbenzoate--CoA ligase;protein_id=WP_064035078.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 294888 295145 . + . ID=gene-CCO34_RS14440;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=CCO34_RS14440;old_locus_tag=CCO34_14435 NZ_NPMD01000005.1 Protein Homology CDS 294888 295145 . + 0 ID=cds-WP_000455132.1;Parent=gene-CCO34_RS14440;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=CCO34_RS14440;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 295140 295517 . - . ID=gene-CCO34_RS14445;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=CCO34_RS14445;old_locus_tag=CCO34_14440 NZ_NPMD01000005.1 Protein Homology CDS 295140 295517 . - 0 ID=cds-WP_000538692.1;Parent=gene-CCO34_RS14445;Dbxref=GenBank:WP_000538692.1;Name=WP_000538692.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=CCO34_RS14445;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538692.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 295517 295852 . - . ID=gene-CCO34_RS14450;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=CCO34_RS14450;old_locus_tag=CCO34_14445 NZ_NPMD01000005.1 Protein Homology CDS 295517 295852 . - 0 ID=cds-WP_000580688.1;Parent=gene-CCO34_RS14450;Dbxref=GenBank:WP_000580688.1;Name=WP_000580688.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=CCO34_RS14450;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580688.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 295849 297495 . - . ID=gene-CCO34_RS14455;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=CCO34_RS14455;old_locus_tag=CCO34_14450 NZ_NPMD01000005.1 Protein Homology CDS 295849 297495 . - 0 ID=cds-WP_000978051.1;Parent=gene-CCO34_RS14455;Dbxref=GenBank:WP_000978051.1;Name=WP_000978051.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=CCO34_RS14455;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000978051.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 297492 298391 . - . ID=gene-CCO34_RS14460;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=CCO34_RS14460;old_locus_tag=CCO34_14455 NZ_NPMD01000005.1 Protein Homology CDS 297492 298391 . - 0 ID=cds-WP_000169771.1;Parent=gene-CCO34_RS14460;Dbxref=GenBank:WP_000169771.1;Name=WP_000169771.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=CCO34_RS14460;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169771.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 298388 300370 . - . ID=gene-CCO34_RS14465;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=CCO34_RS14465;old_locus_tag=CCO34_14460 NZ_NPMD01000005.1 Protein Homology CDS 298388 300370 . - 0 ID=cds-WP_000648754.1;Parent=gene-CCO34_RS14465;Dbxref=GenBank:WP_000648754.1;Name=WP_000648754.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=CCO34_RS14465;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_000648754.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 300367 301350 . - . ID=gene-CCO34_RS14470;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=CCO34_RS14470;old_locus_tag=CCO34_14465 NZ_NPMD01000005.1 Protein Homology CDS 300367 301350 . - 0 ID=cds-WP_000458894.1;Parent=gene-CCO34_RS14470;Dbxref=GenBank:WP_000458894.1;Name=WP_000458894.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=CCO34_RS14470;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458894.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 301353 302492 . - . ID=gene-CCO34_RS14475;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=CCO34_RS14475;old_locus_tag=CCO34_14470 NZ_NPMD01000005.1 Protein Homology CDS 301353 302492 . - 0 ID=cds-WP_001279295.1;Parent=gene-CCO34_RS14475;Dbxref=GenBank:WP_001279295.1;Name=WP_001279295.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=CCO34_RS14475;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001279295.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 302791 303396 . + . ID=gene-CCO34_RS14480;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=CCO34_RS14480;old_locus_tag=CCO34_14475 NZ_NPMD01000005.1 Protein Homology CDS 302791 303396 . + 0 ID=cds-WP_000879258.1;Parent=gene-CCO34_RS14480;Dbxref=GenBank:WP_000879258.1;Name=WP_000879258.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=CCO34_RS14480;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879258.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 303441 303866 . - . ID=gene-CCO34_RS14485;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=CCO34_RS14485;old_locus_tag=CCO34_14480 NZ_NPMD01000005.1 Protein Homology CDS 303441 303866 . - 0 ID=cds-WP_094965461.1;Parent=gene-CCO34_RS14485;Dbxref=GenBank:WP_094965461.1;Name=WP_094965461.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=CCO34_RS14485;product=nucleoside triphosphatase NudI;protein_id=WP_094965461.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 304145 304687 . + . ID=gene-CCO34_RS14490;Name=CCO34_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14490;old_locus_tag=CCO34_14485 NZ_NPMD01000005.1 Protein Homology CDS 304145 304687 . + 0 ID=cds-WP_001670658.1;Parent=gene-CCO34_RS14490;Dbxref=GenBank:WP_001670658.1;Name=WP_001670658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=CCO34_RS14490;product=YfaZ family protein;protein_id=WP_001670658.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 304802 305998 . + . ID=gene-CCO34_RS14495;Name=CCO34_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14495;old_locus_tag=CCO34_14490 NZ_NPMD01000005.1 Protein Homology CDS 304802 305998 . + 0 ID=cds-WP_000935685.1;Parent=gene-CCO34_RS14495;Dbxref=GenBank:WP_000935685.1;Name=WP_000935685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=CCO34_RS14495;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000935685.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 306248 307030 . + . ID=gene-CCO34_RS14500;Name=CCO34_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14500;old_locus_tag=CCO34_14495 NZ_NPMD01000005.1 Protein Homology CDS 306248 307030 . + 0 ID=cds-WP_000894170.1;Parent=gene-CCO34_RS14500;Dbxref=GenBank:WP_000894170.1;Name=WP_000894170.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=CCO34_RS14500;product=IclR family transcriptional regulator;protein_id=WP_000894170.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 307044 308249 . + . ID=gene-CCO34_RS14505;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=CCO34_RS14505;old_locus_tag=CCO34_14500 NZ_NPMD01000005.1 Protein Homology CDS 307044 308249 . + 0 ID=cds-WP_001530644.1;Parent=gene-CCO34_RS14505;Dbxref=GenBank:WP_001530644.1;Name=WP_001530644.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=CCO34_RS14505;product=L-rhamnonate dehydratase;protein_id=WP_001530644.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 308305 309594 . + . ID=gene-CCO34_RS14510;Name=CCO34_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14510;old_locus_tag=CCO34_14505 NZ_NPMD01000005.1 Protein Homology CDS 308305 309594 . + 0 ID=cds-WP_000028933.1;Parent=gene-CCO34_RS14510;Dbxref=GenBank:WP_000028933.1;Name=WP_000028933.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=CCO34_RS14510;product=MFS transporter;protein_id=WP_000028933.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 309620 310423 . + . ID=gene-CCO34_RS14515;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=CCO34_RS14515;old_locus_tag=CCO34_14510 NZ_NPMD01000005.1 Protein Homology CDS 309620 310423 . + 0 ID=cds-WP_000992941.1;Parent=gene-CCO34_RS14515;Dbxref=GenBank:WP_000992941.1;Name=WP_000992941.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=CCO34_RS14515;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992941.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 310429 310605 . + . ID=gene-CCO34_RS14520;Name=CCO34_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14520;old_locus_tag=CCO34_14515 NZ_NPMD01000005.1 Protein Homology CDS 310429 310605 . + 0 ID=cds-WP_001112762.1;Parent=gene-CCO34_RS14520;Dbxref=GenBank:WP_001112762.1;Name=WP_001112762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=CCO34_RS14520;product=hypothetical protein;protein_id=WP_001112762.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 310715 311737 . - . ID=gene-CCO34_RS14525;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=CCO34_RS14525;old_locus_tag=CCO34_14520 NZ_NPMD01000005.1 Protein Homology CDS 310715 311737 . - 0 ID=cds-WP_001017736.1;Parent=gene-CCO34_RS14525;Dbxref=GenBank:WP_001017736.1;Name=WP_001017736.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017721.1;locus_tag=CCO34_RS14525;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_001017736.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 312163 313353 . - . ID=gene-CCO34_RS14535;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=CCO34_RS14535;old_locus_tag=CCO34_14530 NZ_NPMD01000005.1 Protein Homology CDS 312163 313353 . - 0 ID=cds-WP_001285726.1;Parent=gene-CCO34_RS14535;Dbxref=GenBank:WP_001285726.1;Name=WP_001285726.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=CCO34_RS14535;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285726.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 313350 314609 . - . ID=gene-CCO34_RS14540;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=CCO34_RS14540;old_locus_tag=CCO34_14535 NZ_NPMD01000005.1 Protein Homology CDS 313350 314609 . - 0 ID=cds-WP_000667152.1;Parent=gene-CCO34_RS14540;Dbxref=GenBank:WP_000667152.1;Name=WP_000667152.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=CCO34_RS14540;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667152.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 314599 316227 . - . ID=gene-CCO34_RS14545;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=CCO34_RS14545;old_locus_tag=CCO34_14540 NZ_NPMD01000005.1 Protein Homology CDS 314599 316227 . - 0 ID=cds-WP_000857218.1;Parent=gene-CCO34_RS14545;Dbxref=GenBank:WP_000857218.1;Name=WP_000857218.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=CCO34_RS14545;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857218.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 316500 317858 . + . ID=gene-CCO34_RS14550;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CCO34_RS14550;old_locus_tag=CCO34_14545 NZ_NPMD01000005.1 Protein Homology CDS 316500 317858 . + 0 ID=cds-WP_000948739.1;Parent=gene-CCO34_RS14550;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=CCO34_RS14550;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 317863 318933 . + . ID=gene-CCO34_RS14555;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=CCO34_RS14555;old_locus_tag=CCO34_14550 NZ_NPMD01000005.1 Protein Homology CDS 317863 318933 . + 0 ID=cds-WP_000858946.1;Parent=gene-CCO34_RS14555;Dbxref=GenBank:WP_000858946.1;Name=WP_000858946.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=CCO34_RS14555;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858946.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 319049 319927 . - . ID=gene-CCO34_RS14560;Name=CCO34_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14560;old_locus_tag=CCO34_14555 NZ_NPMD01000005.1 Protein Homology CDS 319049 319927 . - 0 ID=cds-WP_000176719.1;Parent=gene-CCO34_RS14560;Dbxref=GenBank:WP_000176719.1;Name=WP_000176719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=CCO34_RS14560;product=LysR family transcriptional regulator;protein_id=WP_000176719.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 320089 321279 . + . ID=gene-CCO34_RS14565;Name=CCO34_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14565;old_locus_tag=CCO34_14560 NZ_NPMD01000005.1 Protein Homology CDS 320089 321279 . + 0 ID=cds-WP_000660247.1;Parent=gene-CCO34_RS14565;Dbxref=GenBank:WP_000660247.1;Name=WP_000660247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=CCO34_RS14565;product=MFS transporter;protein_id=WP_000660247.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 321281 321535 . - . ID=gene-CCO34_RS14570;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=CCO34_RS14570;old_locus_tag=CCO34_14565 NZ_NPMD01000005.1 Protein Homology CDS 321281 321535 . - 0 ID=cds-WP_000533921.1;Parent=gene-CCO34_RS14570;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=CCO34_RS14570;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 321535 322665 . - . ID=gene-CCO34_RS14575;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=CCO34_RS14575;old_locus_tag=CCO34_14570 NZ_NPMD01000005.1 Protein Homology CDS 321535 322665 . - 0 ID=cds-WP_000332026.1;Parent=gene-CCO34_RS14575;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=CCO34_RS14575;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 322778 325063 . - . ID=gene-CCO34_RS14580;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=CCO34_RS14580;old_locus_tag=CCO34_14575 NZ_NPMD01000005.1 Protein Homology CDS 322778 325063 . - 0 ID=cds-WP_001076499.1;Parent=gene-CCO34_RS14580;Dbxref=GenBank:WP_001076499.1;Name=WP_001076499.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=CCO34_RS14580;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076499.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 325419 326147 . - . ID=gene-CCO34_RS14585;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=CCO34_RS14585;old_locus_tag=CCO34_14580 NZ_NPMD01000005.1 Protein Homology CDS 325419 326147 . - 0 ID=cds-WP_001091009.1;Parent=gene-CCO34_RS14585;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=CCO34_RS14585;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 326230 327114 . - . ID=gene-CCO34_RS14590;Name=CCO34_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14590;old_locus_tag=CCO34_14585 NZ_NPMD01000005.1 Protein Homology CDS 326230 327114 . - 0 ID=cds-WP_000944714.1;Parent=gene-CCO34_RS14590;Dbxref=GenBank:WP_000944714.1;Name=WP_000944714.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=CCO34_RS14590;product=GntR family transcriptional regulator;protein_id=WP_000944714.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 327164 328489 . + . ID=gene-CCO34_RS14595;Name=CCO34_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14595;old_locus_tag=CCO34_14590 NZ_NPMD01000005.1 Protein Homology CDS 327164 328489 . + 0 ID=cds-WP_000098074.1;Parent=gene-CCO34_RS14595;Dbxref=GenBank:WP_000098074.1;Name=WP_000098074.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=CCO34_RS14595;product=MFS transporter;protein_id=WP_000098074.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 328504 329706 . + . ID=gene-CCO34_RS14600;Name=CCO34_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14600;old_locus_tag=CCO34_14595 NZ_NPMD01000005.1 Protein Homology CDS 328504 329706 . + 0 ID=cds-WP_000705581.1;Parent=gene-CCO34_RS14600;Dbxref=GenBank:WP_000705581.1;Name=WP_000705581.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=CCO34_RS14600;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705581.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 330116 332752 . + . ID=gene-CCO34_RS14610;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CCO34_RS14610;old_locus_tag=CCO34_14605 NZ_NPMD01000005.1 Protein Homology CDS 330116 332752 . + 0 ID=cds-WP_001281271.1;Parent=gene-CCO34_RS14610;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=CCO34_RS14610;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 332870 335716 . + . ID=gene-CCO34_RS14615;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=CCO34_RS14615;old_locus_tag=CCO34_14610 NZ_NPMD01000005.1 Protein Homology CDS 332870 335716 . + 0 ID=cds-WP_000876084.1;Parent=gene-CCO34_RS14615;Dbxref=GenBank:WP_000876084.1;Name=WP_000876084.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=CCO34_RS14615;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876084.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 335818 336468 . - . ID=gene-CCO34_RS14620;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=CCO34_RS14620;old_locus_tag=CCO34_14615 NZ_NPMD01000005.1 Protein Homology CDS 335818 336468 . - 0 ID=cds-WP_001061919.1;Parent=gene-CCO34_RS14620;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=CCO34_RS14620;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 336485 339154 . - . ID=gene-CCO34_RS14625;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=CCO34_RS14625;old_locus_tag=CCO34_14620 NZ_NPMD01000005.1 Protein Homology CDS 336485 339154 . - 0 ID=cds-WP_000083201.1;Parent=gene-CCO34_RS14625;Dbxref=GenBank:WP_000083201.1;Name=WP_000083201.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=CCO34_RS14625;product=phosphotransferase RcsD;protein_id=WP_000083201.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 339883 341019 . + . ID=gene-CCO34_RS14635;Name=CCO34_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14635;old_locus_tag=CCO34_14630 NZ_NPMD01000005.1 Protein Homology CDS 339883 341019 . + 0 ID=cds-WP_000865526.1;Parent=gene-CCO34_RS14635;Dbxref=GenBank:WP_000865526.1;Name=WP_000865526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=CCO34_RS14635;product=porin OmpC;protein_id=WP_000865526.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 341134 342186 . + . ID=gene-CCO34_RS14640;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=CCO34_RS14640;old_locus_tag=CCO34_14635 NZ_NPMD01000005.1 Protein Homology CDS 341134 342186 . + 0 ID=cds-WP_000784307.1;Parent=gene-CCO34_RS14640;Dbxref=GenBank:WP_000784307.1;Name=WP_000784307.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=CCO34_RS14640;product=FAD:protein FMN transferase ApbE;protein_id=WP_000784307.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 342267 343328 . + . ID=gene-CCO34_RS14645;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=CCO34_RS14645;old_locus_tag=CCO34_14640 NZ_NPMD01000005.1 Protein Homology CDS 342267 343328 . + 0 ID=cds-WP_000975970.1;Parent=gene-CCO34_RS14645;Dbxref=GenBank:WP_000975970.1;Name=WP_000975970.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=CCO34_RS14645;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000975970.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 343331 343981 . + . ID=gene-CCO34_RS14650;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=CCO34_RS14650;old_locus_tag=CCO34_14645 NZ_NPMD01000005.1 Protein Homology CDS 343331 343981 . + 0 ID=cds-WP_000884996.1;Parent=gene-CCO34_RS14650;Dbxref=GenBank:WP_000884996.1;Name=WP_000884996.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=CCO34_RS14650;product=DNA oxidative demethylase AlkB;protein_id=WP_000884996.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 344057 345700 . + . ID=gene-CCO34_RS14655;Name=CCO34_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14655;old_locus_tag=CCO34_14650 NZ_NPMD01000005.1 Protein Homology CDS 344057 345700 . + 0 ID=cds-WP_000421592.1;Parent=gene-CCO34_RS14655;Dbxref=GenBank:WP_000421592.1;Name=WP_000421592.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=CCO34_RS14655;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_000421592.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 345900 346394 . - . ID=gene-CCO34_RS14660;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=CCO34_RS14660;old_locus_tag=CCO34_14655 NZ_NPMD01000005.1 Protein Homology CDS 345900 346394 . - 0 ID=cds-WP_001550295.1;Parent=gene-CCO34_RS14660;Dbxref=GenBank:WP_001550295.1;Name=WP_001550295.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=CCO34_RS14660;product=serine protease inhibitor ecotin;protein_id=WP_001550295.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 346808 347299 . + . ID=gene-CCO34_RS14665;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=CCO34_RS14665;old_locus_tag=CCO34_14660 NZ_NPMD01000005.1 Protein Homology CDS 346808 347299 . + 0 ID=cds-WP_000228064.1;Parent=gene-CCO34_RS14665;Dbxref=GenBank:WP_000228064.1;Name=WP_000228064.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=CCO34_RS14665;product=ferredoxin-type protein NapF;protein_id=WP_000228064.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 347289 347552 . + . ID=gene-CCO34_RS14670;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=CCO34_RS14670;old_locus_tag=CCO34_14665 NZ_NPMD01000005.1 Protein Homology CDS 347289 347552 . + 0 ID=cds-WP_001260058.1;Parent=gene-CCO34_RS14670;Dbxref=GenBank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=CCO34_RS14670;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 347549 350035 . + . ID=gene-CCO34_RS14675;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=CCO34_RS14675;old_locus_tag=CCO34_14670 NZ_NPMD01000005.1 Protein Homology CDS 347549 350035 . + 0 ID=cds-WP_000778097.1;Parent=gene-CCO34_RS14675;Dbxref=GenBank:WP_000778097.1;Name=WP_000778097.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=CCO34_RS14675;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778097.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 350042 350737 . + . ID=gene-CCO34_RS14680;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=CCO34_RS14680;old_locus_tag=CCO34_14675 NZ_NPMD01000005.1 Protein Homology CDS 350042 350737 . + 0 ID=cds-WP_000091679.1;Parent=gene-CCO34_RS14680;Dbxref=GenBank:WP_000091679.1;Name=WP_000091679.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=CCO34_RS14680;product=ferredoxin-type protein NapG;protein_id=WP_000091679.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 350724 351593 . + . ID=gene-CCO34_RS14685;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=CCO34_RS14685;old_locus_tag=CCO34_14680 NZ_NPMD01000005.1 Protein Homology CDS 350724 351593 . + 0 ID=cds-WP_000013529.1;Parent=gene-CCO34_RS14685;Dbxref=GenBank:WP_000013529.1;Name=WP_000013529.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=CCO34_RS14685;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013529.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 351709 352158 . + . ID=gene-CCO34_RS14690;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=CCO34_RS14690;old_locus_tag=CCO34_14685 NZ_NPMD01000005.1 Protein Homology CDS 351709 352158 . + 0 ID=cds-WP_000835182.1;Parent=gene-CCO34_RS14690;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=CCO34_RS14690;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 352168 352770 . + . ID=gene-CCO34_RS14695;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=CCO34_RS14695;old_locus_tag=CCO34_14690 NZ_NPMD01000005.1 Protein Homology CDS 352168 352770 . + 0 ID=cds-WP_000431778.1;Parent=gene-CCO34_RS14695;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=CCO34_RS14695;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 352791 353408 . + . ID=gene-CCO34_RS14700;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO34_RS14700;old_locus_tag=CCO34_14695 NZ_NPMD01000005.1 Protein Homology CDS 352791 353408 . + 0 ID=cds-WP_094965462.1;Parent=gene-CCO34_RS14700;Dbxref=GenBank:WP_094965462.1;Name=WP_094965462.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO34_RS14700;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_094965462.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 353405 354064 . + . ID=gene-CCO34_RS14705;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=CCO34_RS14705;old_locus_tag=CCO34_14700 NZ_NPMD01000005.1 Protein Homology CDS 353405 354064 . + 0 ID=cds-WP_000990038.1;Parent=gene-CCO34_RS14705;Dbxref=GenBank:WP_000990038.1;Name=WP_000990038.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=CCO34_RS14705;product=heme exporter protein CcmB;protein_id=WP_000990038.1;transl_table=11 NZ_NPMD01000005.1 RefSeq gene 354116 354479 . + . ID=gene-CCO34_RS14710;Name=ccsA;end_range=354479,.;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=CCO34_RS14710;old_locus_tag=CCO34_14705;partial=true NZ_NPMD01000005.1 Protein Homology CDS 354116 354479 . + 0 ID=cds-WP_165418611.1-2;Parent=gene-CCO34_RS14710;Dbxref=GenBank:WP_165418611.1;Name=WP_165418611.1;Ontology_term=GO:0017004,GO:0020037;end_range=354479,.;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO34_RS14710;partial=true;product=cytochrome c biogenesis protein CcsA;protein_id=WP_165418611.1;transl_table=11 ##sequence-region NZ_NPMD01000006.1 1 354219 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000006.1 RefSeq region 1 354219 . + . ID=NZ_NPMD01000006.1:1..354219;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000006.1 RefSeq gene 190 753 . - . ID=gene-CCO34_RS14715;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=CCO34_RS14715;old_locus_tag=CCO34_14710 NZ_NPMD01000006.1 Protein Homology CDS 190 753 . - 0 ID=cds-WP_000045725.1;Parent=gene-CCO34_RS14715;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=CCO34_RS14715;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 1076 3208 . + . ID=gene-CCO34_RS14720;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=CCO34_RS14720;old_locus_tag=CCO34_14715 NZ_NPMD01000006.1 Protein Homology CDS 1076 3208 . + 0 ID=cds-WP_000104092.1;Parent=gene-CCO34_RS14720;Dbxref=GenBank:WP_000104092.1;Name=WP_000104092.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=CCO34_RS14720;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104092.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 3273 3941 . + . ID=gene-CCO34_RS14725;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=CCO34_RS14725;old_locus_tag=CCO34_14720 NZ_NPMD01000006.1 Protein Homology CDS 3273 3941 . + 0 ID=cds-WP_001520508.1;Parent=gene-CCO34_RS14725;Dbxref=GenBank:WP_001520508.1;Name=WP_001520508.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=CCO34_RS14725;product=GMP/IMP nucleotidase;protein_id=WP_001520508.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 3952 4353 . + . ID=gene-CCO34_RS14730;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=CCO34_RS14730;old_locus_tag=CCO34_14725 NZ_NPMD01000006.1 Protein Homology CDS 3952 4353 . + 0 ID=cds-WP_000660723.1;Parent=gene-CCO34_RS14730;Dbxref=GenBank:WP_000660723.1;Name=WP_000660723.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=CCO34_RS14730;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660723.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 4378 5256 . + . ID=gene-CCO34_RS14735;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CCO34_RS14735;old_locus_tag=CCO34_14730 NZ_NPMD01000006.1 Protein Homology CDS 4378 5256 . + 0 ID=cds-WP_023202841.1;Parent=gene-CCO34_RS14735;Dbxref=GenBank:WP_023202841.1;Name=WP_023202841.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=CCO34_RS14735;product=Hsp33 family molecular chaperone HslO;protein_id=WP_023202841.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 5367 7076 . - . ID=gene-CCO34_RS14740;Name=CCO34_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14740;old_locus_tag=CCO34_14735 NZ_NPMD01000006.1 Protein Homology CDS 5367 7076 . - 0 ID=cds-WP_000446447.1;Parent=gene-CCO34_RS14740;Dbxref=GenBank:WP_000446447.1;Name=WP_000446447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=CCO34_RS14740;product=DUF4153 domain-containing protein;protein_id=WP_000446447.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 7456 9075 . + . ID=gene-CCO34_RS14745;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CCO34_RS14745;old_locus_tag=CCO34_14740 NZ_NPMD01000006.1 Protein Homology CDS 7456 9075 . + 0 ID=cds-WP_001265689.1;Parent=gene-CCO34_RS14745;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=CCO34_RS14745;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 9150 10502 . - . ID=gene-CCO34_RS14750;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=CCO34_RS14750;old_locus_tag=CCO34_14745 NZ_NPMD01000006.1 Protein Homology CDS 9150 10502 . - 0 ID=cds-WP_001253818.1;Parent=gene-CCO34_RS14750;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=CCO34_RS14750;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 10499 11218 . - . ID=gene-CCO34_RS14755;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=CCO34_RS14755;old_locus_tag=CCO34_14750 NZ_NPMD01000006.1 Protein Homology CDS 10499 11218 . - 0 ID=cds-WP_001157751.1;Parent=gene-CCO34_RS14755;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=CCO34_RS14755;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 11444 11917 . + . ID=gene-CCO34_RS14760;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=CCO34_RS14760;old_locus_tag=CCO34_14755 NZ_NPMD01000006.1 Protein Homology CDS 11444 11917 . + 0 ID=cds-WP_000856695.1;Parent=gene-CCO34_RS14760;Dbxref=GenBank:WP_000856695.1;Name=WP_000856695.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=CCO34_RS14760;product=transcription elongation factor GreB;protein_id=WP_000856695.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 12016 14346 . + . ID=gene-CCO34_RS14765;Name=CCO34_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14765;old_locus_tag=CCO34_14760 NZ_NPMD01000006.1 Protein Homology CDS 12016 14346 . + 0 ID=cds-WP_000980662.1;Parent=gene-CCO34_RS14765;Dbxref=GenBank:WP_000980662.1;Name=WP_000980662.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=CCO34_RS14765;product=Tex family protein;protein_id=WP_000980662.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 14783 15010 . + . ID=gene-CCO34_RS14775;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=CCO34_RS14775;old_locus_tag=CCO34_14770 NZ_NPMD01000006.1 Protein Homology CDS 14783 15010 . + 0 ID=cds-WP_001160955.1;Parent=gene-CCO34_RS14775;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=CCO34_RS14775;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 15029 17347 . + . ID=gene-CCO34_RS14780;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CCO34_RS14780;old_locus_tag=CCO34_14775 NZ_NPMD01000006.1 Protein Homology CDS 15029 17347 . + 0 ID=cds-WP_000736983.1;Parent=gene-CCO34_RS14780;Dbxref=GenBank:WP_000736983.1;Name=WP_000736983.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=CCO34_RS14780;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000736983.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 17360 17596 . + . ID=gene-CCO34_RS14785;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=CCO34_RS14785;old_locus_tag=CCO34_14780 NZ_NPMD01000006.1 Protein Homology CDS 17360 17596 . + 0 ID=cds-WP_000157589.1;Parent=gene-CCO34_RS14785;Dbxref=GenBank:WP_000157589.1;Name=WP_000157589.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=CCO34_RS14785;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157589.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 17831 18757 . + . ID=gene-CCO34_RS14790;Name=CCO34_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14790;old_locus_tag=CCO34_14785 NZ_NPMD01000006.1 Protein Homology CDS 17831 18757 . + 0 ID=cds-WP_000235952.1;Parent=gene-CCO34_RS14790;Dbxref=GenBank:WP_000235952.1;Name=WP_000235952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=CCO34_RS14790;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000235952.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 18793 19563 . - . ID=gene-CCO34_RS14795;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=CCO34_RS14795;old_locus_tag=CCO34_14790 NZ_NPMD01000006.1 Protein Homology CDS 18793 19563 . - 0 ID=cds-WP_000998150.1;Parent=gene-CCO34_RS14795;Dbxref=GenBank:WP_000998150.1;Name=WP_000998150.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=CCO34_RS14795;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998150.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 19601 20284 . + . ID=gene-CCO34_RS14800;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=CCO34_RS14800;old_locus_tag=CCO34_14795 NZ_NPMD01000006.1 Protein Homology CDS 19601 20284 . + 0 ID=cds-WP_000958733.1;Parent=gene-CCO34_RS14800;Dbxref=GenBank:WP_000958733.1;Name=WP_000958733.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=CCO34_RS14800;product=DNA utilization protein GntX;protein_id=WP_000958733.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 20343 20918 . + . ID=gene-CCO34_RS14805;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=CCO34_RS14805;old_locus_tag=CCO34_14800 NZ_NPMD01000006.1 Protein Homology CDS 20343 20918 . + 0 ID=cds-WP_000619387.1;Parent=gene-CCO34_RS14805;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=CCO34_RS14805;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 21295 22611 . + . ID=gene-CCO34_RS14810;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=CCO34_RS14810;old_locus_tag=CCO34_14805 NZ_NPMD01000006.1 Protein Homology CDS 21295 22611 . + 0 ID=cds-WP_023228826.1;Parent=gene-CCO34_RS14810;Dbxref=GenBank:WP_023228826.1;Name=WP_023228826.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=CCO34_RS14810;product=gluconate transporter;protein_id=WP_023228826.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 22730 24808 . - . ID=gene-CCO34_RS14815;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=CCO34_RS14815;old_locus_tag=CCO34_14810 NZ_NPMD01000006.1 Protein Homology CDS 22730 24808 . - 0 ID=cds-WP_080181050.1;Parent=gene-CCO34_RS14815;Dbxref=GenBank:WP_080181050.1;Name=WP_080181050.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=CCO34_RS14815;product=4-alpha-glucanotransferase;protein_id=WP_080181050.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 24818 27211 . - . ID=gene-CCO34_RS14820;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=CCO34_RS14820;old_locus_tag=CCO34_14815 NZ_NPMD01000006.1 Protein Homology CDS 24818 27211 . - 0 ID=cds-WP_080181049.1;Parent=gene-CCO34_RS14820;Dbxref=GenBank:WP_080181049.1;Name=WP_080181049.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=CCO34_RS14820;product=maltodextrin phosphorylase;protein_id=WP_080181049.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 27805 30510 . + . ID=gene-CCO34_RS14825;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=CCO34_RS14825;old_locus_tag=CCO34_14820 NZ_NPMD01000006.1 Protein Homology CDS 27805 30510 . + 0 ID=cds-WP_000907030.1;Parent=gene-CCO34_RS14825;Dbxref=GenBank:WP_000907030.1;Name=WP_000907030.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=CCO34_RS14825;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907030.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 30584 31342 . - . ID=gene-CCO34_RS14830;Name=CCO34_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14830;old_locus_tag=CCO34_14825 NZ_NPMD01000006.1 Protein Homology CDS 30584 31342 . - 0 ID=cds-WP_000815084.1;Parent=gene-CCO34_RS14830;Dbxref=GenBank:WP_000815084.1;Name=WP_000815084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=CCO34_RS14830;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815084.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 31436 32266 . - . ID=gene-CCO34_RS14835;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=CCO34_RS14835;old_locus_tag=CCO34_14830 NZ_NPMD01000006.1 Protein Homology CDS 31436 32266 . - 0 ID=cds-WP_000928701.1;Parent=gene-CCO34_RS14835;Dbxref=GenBank:WP_000928701.1;Name=WP_000928701.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=CCO34_RS14835;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928701.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 32342 32668 . - . ID=gene-CCO34_RS14840;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=CCO34_RS14840;old_locus_tag=CCO34_14835 NZ_NPMD01000006.1 Protein Homology CDS 32342 32668 . - 0 ID=cds-WP_000434524.1;Parent=gene-CCO34_RS14840;Dbxref=GenBank:WP_000434524.1;Name=WP_000434524.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=CCO34_RS14840;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434524.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 32867 34375 . + . ID=gene-CCO34_RS14845;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=CCO34_RS14845;old_locus_tag=CCO34_14840 NZ_NPMD01000006.1 Protein Homology CDS 32867 34375 . + 0 ID=cds-WP_000448178.1;Parent=gene-CCO34_RS14845;Dbxref=GenBank:WP_000448178.1;Name=WP_000448178.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=CCO34_RS14845;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448178.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 34423 34968 . - . ID=gene-CCO34_RS14850;Name=CCO34_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14850;old_locus_tag=CCO34_14845 NZ_NPMD01000006.1 Protein Homology CDS 34423 34968 . - 0 ID=cds-WP_000390372.1;Parent=gene-CCO34_RS14850;Dbxref=GenBank:WP_000390372.1;Name=WP_000390372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=CCO34_RS14850;product=hypothetical protein;protein_id=WP_000390372.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 34978 36474 . - . ID=gene-CCO34_RS14855;Name=CCO34_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14855;old_locus_tag=CCO34_14850 NZ_NPMD01000006.1 Protein Homology CDS 34978 36474 . - 0 ID=cds-WP_000786193.1;Parent=gene-CCO34_RS14855;Dbxref=GenBank:WP_000786193.1;Name=WP_000786193.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786181.1;locus_tag=CCO34_RS14855;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_000786193.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 36632 37741 . - . ID=gene-CCO34_RS14860;Name=CCO34_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14860;old_locus_tag=CCO34_14855 NZ_NPMD01000006.1 Protein Homology CDS 36632 37741 . - 0 ID=cds-WP_000258847.1;Parent=gene-CCO34_RS14860;Dbxref=GenBank:WP_000258847.1;Name=WP_000258847.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=CCO34_RS14860;product=glycerol dehydrogenase;protein_id=WP_000258847.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 38079 39413 . + . ID=gene-CCO34_RS14865;Name=CCO34_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14865;old_locus_tag=CCO34_14860 NZ_NPMD01000006.1 Protein Homology CDS 38079 39413 . + 0 ID=cds-WP_001518078.1;Parent=gene-CCO34_RS14865;Dbxref=GenBank:WP_001518078.1;Name=WP_001518078.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=CCO34_RS14865;product=MFS transporter;protein_id=WP_001518078.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 39410 41125 . + . ID=gene-CCO34_RS14870;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CCO34_RS14870;old_locus_tag=CCO34_14865 NZ_NPMD01000006.1 Protein Homology CDS 39410 41125 . + 0 ID=cds-WP_000078497.1;Parent=gene-CCO34_RS14870;Dbxref=GenBank:WP_000078497.1;Name=WP_000078497.1;Ontology_term=GO:0009097,GO:0009099,GO:0000287,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=magnesium ion binding|0000287||IEA,dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,L-valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=CCO34_RS14870;product=dihydroxy-acid dehydratase;protein_id=WP_000078497.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 41169 42074 . + . ID=gene-CCO34_RS14875;Name=CCO34_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14875;old_locus_tag=CCO34_14870 NZ_NPMD01000006.1 Protein Homology CDS 41169 42074 . + 0 ID=cds-WP_000192193.1;Parent=gene-CCO34_RS14875;Dbxref=GenBank:WP_000192193.1;Name=WP_000192193.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=CCO34_RS14875;product=dihydrodipicolinate synthase family protein;protein_id=WP_000192193.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 42118 42873 . - . ID=gene-CCO34_RS14880;Name=CCO34_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14880;old_locus_tag=CCO34_14875 NZ_NPMD01000006.1 Protein Homology CDS 42118 42873 . - 0 ID=cds-WP_000724553.1;Parent=gene-CCO34_RS14880;Dbxref=GenBank:WP_000724553.1;Name=WP_000724553.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=CCO34_RS14880;product=IclR family transcriptional regulator;protein_id=WP_000724553.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 43051 45498 . - . ID=gene-CCO34_RS14885;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=CCO34_RS14885;old_locus_tag=CCO34_14880 NZ_NPMD01000006.1 Protein Homology CDS 43051 45498 . - 0 ID=cds-WP_000993424.1;Parent=gene-CCO34_RS14885;Dbxref=GenBank:WP_000993424.1;Name=WP_000993424.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=CCO34_RS14885;product=glycogen phosphorylase;protein_id=WP_000993424.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 45518 46951 . - . ID=gene-CCO34_RS14890;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=CCO34_RS14890;old_locus_tag=CCO34_14885 NZ_NPMD01000006.1 Protein Homology CDS 45518 46951 . - 0 ID=cds-WP_001197669.1;Parent=gene-CCO34_RS14890;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=CCO34_RS14890;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 46951 48246 . - . ID=gene-CCO34_RS14895;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=CCO34_RS14895;old_locus_tag=CCO34_14890 NZ_NPMD01000006.1 Protein Homology CDS 46951 48246 . - 0 ID=cds-WP_000253994.1;Parent=gene-CCO34_RS14895;Dbxref=GenBank:WP_000253994.1;Name=WP_000253994.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=CCO34_RS14895;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253994.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 48261 50237 . - . ID=gene-CCO34_RS14900;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO34_RS14900;old_locus_tag=CCO34_14895 NZ_NPMD01000006.1 Protein Homology CDS 48261 50237 . - 0 ID=cds-WP_000192503.1;Parent=gene-CCO34_RS14900;Dbxref=GenBank:WP_000192503.1;Name=WP_000192503.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=CCO34_RS14900;product=glycogen debranching protein GlgX;protein_id=WP_000192503.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 50234 52420 . - . ID=gene-CCO34_RS14905;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=CCO34_RS14905;old_locus_tag=CCO34_14900 NZ_NPMD01000006.1 Protein Homology CDS 50234 52420 . - 0 ID=cds-WP_000098548.1;Parent=gene-CCO34_RS14905;Dbxref=GenBank:WP_000098548.1;Name=WP_000098548.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=CCO34_RS14905;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098548.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 52767 53873 . - . ID=gene-CCO34_RS14910;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO34_RS14910;old_locus_tag=CCO34_14905 NZ_NPMD01000006.1 Protein Homology CDS 52767 53873 . - 0 ID=cds-WP_000799940.1;Parent=gene-CCO34_RS14910;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=CCO34_RS14910;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 54000 54380 . + . ID=gene-CCO34_RS14915;Name=CCO34_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14915;old_locus_tag=CCO34_14910 NZ_NPMD01000006.1 Protein Homology CDS 54000 54380 . + 0 ID=cds-WP_077910432.1;Parent=gene-CCO34_RS14915;Dbxref=GenBank:WP_077910432.1;Name=WP_077910432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=CCO34_RS14915;product=MarC family protein;protein_id=WP_077910432.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 54297 55637 . - . ID=gene-CCO34_RS14920;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=CCO34_RS14920;old_locus_tag=CCO34_14915 NZ_NPMD01000006.1 Protein Homology CDS 54297 55637 . - 0 ID=cds-WP_000105950.1;Parent=gene-CCO34_RS14920;Dbxref=GenBank:WP_000105950.1;Name=WP_000105950.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=CCO34_RS14920;product=gluconate transporter;protein_id=WP_000105950.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 55634 56167 . - . ID=gene-CCO34_RS14925;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CCO34_RS14925;old_locus_tag=CCO34_14920 NZ_NPMD01000006.1 Protein Homology CDS 55634 56167 . - 0 ID=cds-WP_000108342.1;Parent=gene-CCO34_RS14925;Dbxref=GenBank:WP_000108342.1;Name=WP_000108342.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=CCO34_RS14925;product=gluconokinase;protein_id=WP_000108342.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 56306 57301 . - . ID=gene-CCO34_RS14930;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=CCO34_RS14930;old_locus_tag=CCO34_14925 NZ_NPMD01000006.1 Protein Homology CDS 56306 57301 . - 0 ID=cds-WP_000730239.1;Parent=gene-CCO34_RS14930;Dbxref=GenBank:WP_000730239.1;Name=WP_000730239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=CCO34_RS14930;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 57430 58125 . - . ID=gene-CCO34_RS14935;Name=CCO34_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14935;old_locus_tag=CCO34_14930 NZ_NPMD01000006.1 Protein Homology CDS 57430 58125 . - 0 ID=cds-WP_000639789.1;Parent=gene-CCO34_RS14935;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=CCO34_RS14935;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 58249 59286 . - . ID=gene-CCO34_RS14940;Name=CCO34_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14940;old_locus_tag=CCO34_14935 NZ_NPMD01000006.1 Protein Homology CDS 58249 59286 . - 0 ID=cds-WP_000172384.1;Parent=gene-CCO34_RS14940;Dbxref=GenBank:WP_000172384.1;Name=WP_000172384.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=CCO34_RS14940;product=oxidoreductase;protein_id=WP_000172384.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 59755 60243 . + . ID=gene-CCO34_RS14950;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=CCO34_RS14950;old_locus_tag=CCO34_14945 NZ_NPMD01000006.1 Protein Homology CDS 59755 60243 . + 0 ID=cds-WP_001290278.1;Parent=gene-CCO34_RS14950;Dbxref=GenBank:WP_001290278.1;Name=WP_001290278.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=CCO34_RS14950;product=N-acetyltransferase;protein_id=WP_001290278.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 60508 61722 . + . ID=gene-CCO34_RS14955;Name=CCO34_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14955;old_locus_tag=CCO34_14950 NZ_NPMD01000006.1 Protein Homology CDS 60508 61722 . + 0 ID=cds-WP_000667440.1;Parent=gene-CCO34_RS14955;Dbxref=GenBank:WP_000667440.1;Name=WP_000667440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=CCO34_RS14955;product=PfkB family carbohydrate kinase;protein_id=WP_000667440.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 61738 62499 . + . ID=gene-CCO34_RS14960;Name=CCO34_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14960;old_locus_tag=CCO34_14955 NZ_NPMD01000006.1 Protein Homology CDS 61738 62499 . + 0 ID=cds-WP_001066509.1;Parent=gene-CCO34_RS14960;Dbxref=GenBank:WP_001066509.1;Name=WP_001066509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=CCO34_RS14960;product=glutamine amidotransferase;protein_id=WP_001066509.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 62553 63524 . + . ID=gene-CCO34_RS14965;Name=CCO34_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14965;old_locus_tag=CCO34_14960 NZ_NPMD01000006.1 Protein Homology CDS 62553 63524 . + 0 ID=cds-WP_001038949.1;Parent=gene-CCO34_RS14965;Dbxref=GenBank:WP_001038949.1;Name=WP_001038949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=CCO34_RS14965;product=DMT family transporter;protein_id=WP_001038949.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 63521 64555 . + . ID=gene-CCO34_RS14970;Name=CCO34_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14970;old_locus_tag=CCO34_14965 NZ_NPMD01000006.1 Protein Homology CDS 63521 64555 . + 0 ID=cds-WP_000675710.1;Parent=gene-CCO34_RS14970;Dbxref=GenBank:WP_000675710.1;Name=WP_000675710.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=CCO34_RS14970;product=phosphotriesterase family protein;protein_id=WP_000675710.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 64600 66342 . - . ID=gene-CCO34_RS14975;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=CCO34_RS14975;old_locus_tag=CCO34_14970 NZ_NPMD01000006.1 Protein Homology CDS 64600 66342 . - 0 ID=cds-WP_000805112.1;Parent=gene-CCO34_RS14975;Dbxref=GenBank:WP_000805112.1;Name=WP_000805112.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=CCO34_RS14975;product=gamma-glutamyltransferase;protein_id=WP_000805112.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 66468 66884 . + . ID=gene-CCO34_RS14980;Name=CCO34_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14980;old_locus_tag=CCO34_14975 NZ_NPMD01000006.1 Protein Homology CDS 66468 66884 . + 0 ID=cds-WP_000826042.1;Parent=gene-CCO34_RS14980;Dbxref=GenBank:WP_000826042.1;Name=WP_000826042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=CCO34_RS14980;product=DUF2756 family protein;protein_id=WP_000826042.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 66897 67637 . - . ID=gene-CCO34_RS14985;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=CCO34_RS14985;old_locus_tag=CCO34_14980 NZ_NPMD01000006.1 Protein Homology CDS 66897 67637 . - 0 ID=cds-WP_000073542.1;Parent=gene-CCO34_RS14985;Dbxref=GenBank:WP_000073542.1;Name=WP_000073542.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=CCO34_RS14985;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073542.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 67634 68704 . - . ID=gene-CCO34_RS14990;Name=CCO34_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS14990;old_locus_tag=CCO34_14985 NZ_NPMD01000006.1 Protein Homology CDS 67634 68704 . - 0 ID=cds-WP_000907837.1;Parent=gene-CCO34_RS14990;Dbxref=GenBank:WP_000907837.1;Name=WP_000907837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=CCO34_RS14990;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907837.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 68707 69552 . - . ID=gene-CCO34_RS14995;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=CCO34_RS14995;old_locus_tag=CCO34_14990 NZ_NPMD01000006.1 Protein Homology CDS 68707 69552 . - 0 ID=cds-WP_000572196.1;Parent=gene-CCO34_RS14995;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=CCO34_RS14995;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 69549 70436 . - . ID=gene-CCO34_RS15000;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=CCO34_RS15000;old_locus_tag=CCO34_14995 NZ_NPMD01000006.1 Protein Homology CDS 69549 70436 . - 0 ID=cds-WP_001138989.1;Parent=gene-CCO34_RS15000;Dbxref=GenBank:WP_001138989.1;Name=WP_001138989.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=CCO34_RS15000;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_001138989.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 70541 71857 . - . ID=gene-CCO34_RS15005;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=CCO34_RS15005;old_locus_tag=CCO34_15000 NZ_NPMD01000006.1 Protein Homology CDS 70541 71857 . - 0 ID=cds-WP_000624753.1;Parent=gene-CCO34_RS15005;Dbxref=GenBank:WP_000624753.1;Name=WP_000624753.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=CCO34_RS15005;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624753.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 72116 72484 . - . ID=gene-CCO34_RS15010;Name=CCO34_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15010;old_locus_tag=CCO34_15005 NZ_NPMD01000006.1 Protein Homology CDS 72116 72484 . - 0 ID=cds-WP_000174966.1;Parent=gene-CCO34_RS15010;Dbxref=GenBank:WP_000174966.1;Name=WP_000174966.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=CCO34_RS15010;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_000174966.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 72481 72702 . - . ID=gene-CCO34_RS15015;Name=CCO34_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15015;old_locus_tag=CCO34_15010 NZ_NPMD01000006.1 Protein Homology CDS 72481 72702 . - 0 ID=cds-WP_001535398.1;Parent=gene-CCO34_RS15015;Dbxref=GenBank:WP_001535398.1;Name=WP_001535398.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=CCO34_RS15015;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_001535398.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 72834 73547 . - . ID=gene-CCO34_RS15020;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=CCO34_RS15020;old_locus_tag=CCO34_15015 NZ_NPMD01000006.1 Protein Homology CDS 72834 73547 . - 0 ID=cds-WP_000416114.1;Parent=gene-CCO34_RS15020;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=CCO34_RS15020;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 73549 74316 . - . ID=gene-CCO34_RS15025;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=CCO34_RS15025;old_locus_tag=CCO34_15020 NZ_NPMD01000006.1 Protein Homology CDS 73549 74316 . - 0 ID=cds-WP_000082080.1;Parent=gene-CCO34_RS15025;Dbxref=GenBank:WP_000082080.1;Name=WP_000082080.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=CCO34_RS15025;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082080.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 74313 75590 . - . ID=gene-CCO34_RS15030;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=CCO34_RS15030;old_locus_tag=CCO34_15025 NZ_NPMD01000006.1 Protein Homology CDS 74313 75590 . - 0 ID=cds-WP_000803764.1;Parent=gene-CCO34_RS15030;Dbxref=GenBank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=CCO34_RS15030;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 75587 76513 . - . ID=gene-CCO34_RS15035;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=CCO34_RS15035;old_locus_tag=CCO34_15030 NZ_NPMD01000006.1 Protein Homology CDS 75587 76513 . - 0 ID=cds-WP_000003007.1;Parent=gene-CCO34_RS15035;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=CCO34_RS15035;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 76573 77682 . - . ID=gene-CCO34_RS15040;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=CCO34_RS15040;old_locus_tag=CCO34_15035 NZ_NPMD01000006.1 Protein Homology CDS 76573 77682 . - 0 ID=cds-WP_000822974.1;Parent=gene-CCO34_RS15040;Dbxref=GenBank:WP_000822974.1;Name=WP_000822974.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=CCO34_RS15040;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822974.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 78103 78486 . + . ID=gene-CCO34_RS15045;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=CCO34_RS15045;old_locus_tag=CCO34_15040 NZ_NPMD01000006.1 Protein Homology CDS 78103 78486 . + 0 ID=cds-WP_000778873.1;Parent=gene-CCO34_RS15045;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=CCO34_RS15045;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 78464 78598 . + . ID=gene-CCO34_RS15050;Name=CCO34_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15050;old_locus_tag=CCO34_15045 NZ_NPMD01000006.1 Protein Homology CDS 78464 78598 . + 0 ID=cds-WP_001517957.1;Parent=gene-CCO34_RS15050;Dbxref=GenBank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=CCO34_RS15050;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 78682 79785 . - . ID=gene-CCO34_RS15055;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=CCO34_RS15055;old_locus_tag=CCO34_15050 NZ_NPMD01000006.1 Protein Homology CDS 78682 79785 . - 0 ID=cds-WP_140428476.1;Parent=gene-CCO34_RS15055;Dbxref=GenBank:WP_140428476.1;Name=WP_140428476.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229277.1;locus_tag=CCO34_RS15055;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_140428476.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 80107 80961 . - . ID=gene-CCO34_RS15060;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=CCO34_RS15060;old_locus_tag=CCO34_15055 NZ_NPMD01000006.1 Protein Homology CDS 80107 80961 . - 0 ID=cds-WP_000159621.1;Parent=gene-CCO34_RS15060;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=CCO34_RS15060;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 81207 82262 . - . ID=gene-CCO34_RS15065;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=CCO34_RS15065;old_locus_tag=CCO34_15060 NZ_NPMD01000006.1 Protein Homology CDS 81207 82262 . - 0 ID=cds-WP_001081707.1;Parent=gene-CCO34_RS15065;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=CCO34_RS15065;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 82255 82923 . - . ID=gene-CCO34_RS15070;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=CCO34_RS15070;old_locus_tag=CCO34_15065 NZ_NPMD01000006.1 Protein Homology CDS 82255 82923 . - 0 ID=cds-WP_000617729.1;Parent=gene-CCO34_RS15070;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=CCO34_RS15070;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 82926 84401 . - . ID=gene-CCO34_RS15075;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CCO34_RS15075;old_locus_tag=CCO34_15070 NZ_NPMD01000006.1 Protein Homology CDS 82926 84401 . - 0 ID=cds-WP_001118690.1;Parent=gene-CCO34_RS15075;Dbxref=GenBank:WP_001118690.1;Name=WP_001118690.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=CCO34_RS15075;product=signal recognition particle-docking protein FtsY;protein_id=WP_001118690.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 84527 85123 . + . ID=gene-CCO34_RS15080;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CCO34_RS15080;old_locus_tag=CCO34_15075 NZ_NPMD01000006.1 Protein Homology CDS 84527 85123 . + 0 ID=cds-WP_000743277.1;Parent=gene-CCO34_RS15080;Dbxref=GenBank:WP_000743277.1;Name=WP_000743277.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=CCO34_RS15080;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743277.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 85113 85382 . + . ID=gene-CCO34_RS15085;Name=CCO34_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15085;old_locus_tag=CCO34_15080 NZ_NPMD01000006.1 Protein Homology CDS 85113 85382 . + 0 ID=cds-WP_000906759.1;Parent=gene-CCO34_RS15085;Dbxref=GenBank:WP_000906759.1;Name=WP_000906759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=CCO34_RS15085;product=DUF1145 family protein;protein_id=WP_000906759.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 85404 85775 . - . ID=gene-CCO34_RS15090;Name=CCO34_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15090;old_locus_tag=CCO34_15085 NZ_NPMD01000006.1 Protein Homology CDS 85404 85775 . - 0 ID=cds-WP_000042861.1;Parent=gene-CCO34_RS15090;Dbxref=GenBank:WP_000042861.1;Name=WP_000042861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=CCO34_RS15090;product=DUF2500 domain-containing protein;protein_id=WP_000042861.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 85917 86543 . + . ID=gene-CCO34_RS15095;Name=CCO34_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15095;old_locus_tag=CCO34_15090 NZ_NPMD01000006.1 Protein Homology CDS 85917 86543 . + 0 ID=cds-WP_000964735.1;Parent=gene-CCO34_RS15095;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=CCO34_RS15095;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 86624 88822 . + . ID=gene-CCO34_RS15100;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=CCO34_RS15100;old_locus_tag=CCO34_15095 NZ_NPMD01000006.1 Protein Homology CDS 86624 88822 . + 0 ID=cds-WP_000106646.1;Parent=gene-CCO34_RS15100;Dbxref=GenBank:WP_000106646.1;Name=WP_000106646.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=CCO34_RS15100;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_000106646.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 89022 90665 . + . ID=gene-CCO34_RS15105;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=CCO34_RS15105;old_locus_tag=CCO34_15100 NZ_NPMD01000006.1 Protein Homology CDS 89022 90665 . + 0 ID=cds-WP_000789682.1;Parent=gene-CCO34_RS15105;Dbxref=GenBank:WP_000789682.1;Name=WP_000789682.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=CCO34_RS15105;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789682.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 90689 90934 . - . ID=gene-CCO34_RS15110;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=CCO34_RS15110;old_locus_tag=CCO34_15105 NZ_NPMD01000006.1 Protein Homology CDS 90689 90934 . - 0 ID=cds-WP_001541054.1;Parent=gene-CCO34_RS15110;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=CCO34_RS15110;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 91104 91769 . + . ID=gene-CCO34_RS15115;Name=CCO34_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15115;old_locus_tag=CCO34_15110 NZ_NPMD01000006.1 Protein Homology CDS 91104 91769 . + 0 ID=cds-WP_001519906.1;Parent=gene-CCO34_RS15115;Dbxref=GenBank:WP_001519906.1;Name=WP_001519906.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=CCO34_RS15115;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001519906.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 91842 92399 . + . ID=gene-CCO34_RS15120;Name=CCO34_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15120;old_locus_tag=CCO34_15115 NZ_NPMD01000006.1 Protein Homology CDS 91842 92399 . + 0 ID=cds-WP_021000870.1;Parent=gene-CCO34_RS15120;Dbxref=GenBank:WP_021000870.1;Name=WP_021000870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=CCO34_RS15120;product=DcrB family lipoprotein;protein_id=WP_021000870.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 92403 93662 . - . ID=gene-CCO34_RS15125;Name=CCO34_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15125;old_locus_tag=CCO34_15120 NZ_NPMD01000006.1 Protein Homology CDS 92403 93662 . - 0 ID=cds-WP_094965466.1;Parent=gene-CCO34_RS15125;Dbxref=GenBank:WP_094965466.1;Name=WP_094965466.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=CCO34_RS15125;product=MFS transporter;protein_id=WP_094965466.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 93752 94801 . + . ID=gene-CCO34_RS15130;Name=CCO34_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15130;old_locus_tag=CCO34_15125 NZ_NPMD01000006.1 Protein Homology CDS 93752 94801 . + 0 ID=cds-WP_000179594.1;Parent=gene-CCO34_RS15130;Dbxref=GenBank:WP_000179594.1;Name=WP_000179594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=CCO34_RS15130;product=AI-2E family transporter;protein_id=WP_000179594.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 94853 95431 . + . ID=gene-CCO34_RS15135;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=CCO34_RS15135;old_locus_tag=CCO34_15130 NZ_NPMD01000006.1 Protein Homology CDS 94853 95431 . + 0 ID=cds-WP_000285376.1;Parent=gene-CCO34_RS15135;Dbxref=GenBank:WP_000285376.1;Name=WP_000285376.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=CCO34_RS15135;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285376.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 95523 95924 . + . ID=gene-CCO34_RS15140;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=CCO34_RS15140;old_locus_tag=CCO34_15135 NZ_NPMD01000006.1 Protein Homology CDS 95523 95924 . + 0 ID=cds-WP_001190057.1;Parent=gene-CCO34_RS15140;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=CCO34_RS15140;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 96026 97150 . - . ID=gene-CCO34_RS15145;Name=CCO34_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15145;old_locus_tag=CCO34_15140 NZ_NPMD01000006.1 Protein Homology CDS 96026 97150 . - 0 ID=cds-WP_001214757.1;Parent=gene-CCO34_RS15145;Dbxref=GenBank:WP_001214757.1;Name=WP_001214757.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=CCO34_RS15145;product=ABC transporter permease;protein_id=WP_001214757.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 97150 99891 . - . ID=gene-CCO34_RS15150;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=CCO34_RS15150;old_locus_tag=CCO34_15145 NZ_NPMD01000006.1 Protein Homology CDS 97150 99891 . - 0 ID=cds-WP_000202924.1;Parent=gene-CCO34_RS15150;Dbxref=GenBank:WP_000202924.1;Name=WP_000202924.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=CCO34_RS15150;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000202924.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 99888 100955 . - . ID=gene-CCO34_RS15155;Name=CCO34_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15155;old_locus_tag=CCO34_15150 NZ_NPMD01000006.1 Protein Homology CDS 99888 100955 . - 0 ID=cds-WP_000359836.1;Parent=gene-CCO34_RS15155;Dbxref=GenBank:WP_000359836.1;Name=WP_000359836.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=CCO34_RS15155;product=HlyD family secretion protein;protein_id=WP_000359836.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 101261 102457 . - . ID=gene-CCO34_RS15160;Name=CCO34_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15160;old_locus_tag=CCO34_15155 NZ_NPMD01000006.1 Protein Homology CDS 101261 102457 . - 0 ID=cds-WP_000439240.1;Parent=gene-CCO34_RS15160;Dbxref=GenBank:WP_000439240.1;Name=WP_000439240.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=CCO34_RS15160;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439240.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 102688 104184 . + . ID=gene-CCO34_RS15165;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=CCO34_RS15165;old_locus_tag=CCO34_15160 NZ_NPMD01000006.1 Protein Homology CDS 102688 104184 . + 0 ID=cds-WP_000902764.1;Parent=gene-CCO34_RS15165;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=CCO34_RS15165;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 104324 104659 . - . ID=gene-CCO34_RS15170;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=CCO34_RS15170;old_locus_tag=CCO34_15165 NZ_NPMD01000006.1 Protein Homology CDS 104324 104659 . - 0 ID=cds-WP_000626193.1;Parent=gene-CCO34_RS15170;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=CCO34_RS15170;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 105047 105481 . + . ID=gene-CCO34_RS15175;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=CCO34_RS15175;old_locus_tag=CCO34_15170 NZ_NPMD01000006.1 Protein Homology CDS 105047 105481 . + 0 ID=cds-WP_000323565.1;Parent=gene-CCO34_RS15175;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=CCO34_RS15175;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 105806 107278 . + . ID=gene-CCO34_RS15180;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=CCO34_RS15180;old_locus_tag=CCO34_15175 NZ_NPMD01000006.1 Protein Homology CDS 105806 107278 . + 0 ID=cds-WP_001098274.1;Parent=gene-CCO34_RS15180;Dbxref=GenBank:WP_001098274.1;Name=WP_001098274.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=CCO34_RS15180;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098274.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 107370 108128 . - . ID=gene-CCO34_RS15185;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=CCO34_RS15185;old_locus_tag=CCO34_15180 NZ_NPMD01000006.1 Protein Homology CDS 107370 108128 . - 0 ID=cds-WP_001165127.1;Parent=gene-CCO34_RS15185;Dbxref=GenBank:WP_001165127.1;Name=WP_001165127.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=CCO34_RS15185;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_001165127.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 108135 110177 . - . ID=gene-CCO34_RS15190;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=CCO34_RS15190;old_locus_tag=CCO34_15185 NZ_NPMD01000006.1 Protein Homology CDS 108135 110177 . - 0 ID=cds-WP_000184185.1;Parent=gene-CCO34_RS15190;Dbxref=GenBank:WP_000184185.1;Name=WP_000184185.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=CCO34_RS15190;product=oligopeptidase A;protein_id=WP_000184185.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 110359 111630 . - . ID=gene-CCO34_RS15195;Name=CCO34_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15195;old_locus_tag=CCO34_15190 NZ_NPMD01000006.1 Protein Homology CDS 110359 111630 . - 0 ID=cds-WP_000766151.1;Parent=gene-CCO34_RS15195;Dbxref=GenBank:WP_000766151.1;Name=WP_000766151.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=CCO34_RS15195;product=acid phosphatase;protein_id=WP_000766151.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 111841 112683 . + . ID=gene-CCO34_RS15200;Name=CCO34_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15200;old_locus_tag=CCO34_15195 NZ_NPMD01000006.1 Protein Homology CDS 111841 112683 . + 0 ID=cds-WP_000954243.1;Parent=gene-CCO34_RS15200;Dbxref=GenBank:WP_000954243.1;Name=WP_000954243.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=CCO34_RS15200;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954243.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 112788 114140 . + . ID=gene-CCO34_RS15205;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=CCO34_RS15205;old_locus_tag=CCO34_15200 NZ_NPMD01000006.1 Protein Homology CDS 112788 114140 . + 0 ID=cds-WP_000160764.1;Parent=gene-CCO34_RS15205;Dbxref=GenBank:WP_000160764.1;Name=WP_000160764.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=CCO34_RS15205;product=glutathione-disulfide reductase;protein_id=WP_000160764.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 114187 115230 . - . ID=gene-CCO34_RS15210;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=CCO34_RS15210;old_locus_tag=CCO34_15205 NZ_NPMD01000006.1 Protein Homology CDS 114187 115230 . - 0 ID=cds-WP_000702762.1;Parent=gene-CCO34_RS15210;Dbxref=GenBank:WP_000702762.1;Name=WP_000702762.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=CCO34_RS15210;product=fructose-asparagine asparaginase;protein_id=WP_000702762.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 115289 116608 . - . ID=gene-CCO34_RS15215;Name=CCO34_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15215;old_locus_tag=CCO34_15210 NZ_NPMD01000006.1 Protein Homology CDS 115289 116608 . - 0 ID=cds-WP_000498935.1;Parent=gene-CCO34_RS15215;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=CCO34_RS15215;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 116662 117507 . - . ID=gene-CCO34_RS15220;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=CCO34_RS15220;old_locus_tag=CCO34_15215 NZ_NPMD01000006.1 Protein Homology CDS 116662 117507 . - 0 ID=cds-WP_000028431.1;Parent=gene-CCO34_RS15220;Dbxref=GenBank:WP_000028431.1;Name=WP_000028431.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=CCO34_RS15220;product=fructose-aspartate kinase;protein_id=WP_000028431.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 117571 118548 . - . ID=gene-CCO34_RS15225;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=CCO34_RS15225;old_locus_tag=CCO34_15220 NZ_NPMD01000006.1 Protein Homology CDS 117571 118548 . - 0 ID=cds-WP_077906047.1;Parent=gene-CCO34_RS15225;Dbxref=GenBank:WP_077906047.1;Name=WP_077906047.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=CCO34_RS15225;product=6-phosphofructose-aspartate deglycase;protein_id=WP_077906047.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 118724 119443 . - . ID=gene-CCO34_RS15230;Name=CCO34_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15230;old_locus_tag=CCO34_15225 NZ_NPMD01000006.1 Protein Homology CDS 118724 119443 . - 0 ID=cds-WP_000572569.1;Parent=gene-CCO34_RS15230;Dbxref=GenBank:WP_000572569.1;Name=WP_000572569.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=CCO34_RS15230;product=GntR family transcriptional regulator;protein_id=WP_000572569.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 119770 121419 . + . ID=gene-CCO34_RS15235;Name=CCO34_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15235;old_locus_tag=CCO34_15230 NZ_NPMD01000006.1 Protein Homology CDS 119770 121419 . + 0 ID=cds-WP_000934257.1;Parent=gene-CCO34_RS15235;Dbxref=GenBank:WP_000934257.1;Name=WP_000934257.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=CCO34_RS15235;product=alpha%2Calpha-trehalase;protein_id=WP_000934257.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 121432 123021 . - . ID=gene-CCO34_RS15240;Name=CCO34_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15240;old_locus_tag=CCO34_15235 NZ_NPMD01000006.1 Protein Homology CDS 121432 123021 . - 0 ID=cds-WP_000185026.1;Parent=gene-CCO34_RS15240;Dbxref=GenBank:WP_000185026.1;Name=WP_000185026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=CCO34_RS15240;product=STY4199 family HEPN domain-containing protein;protein_id=WP_000185026.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 123302 123658 . + . ID=gene-CCO34_RS15245;Name=CCO34_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15245;old_locus_tag=CCO34_15240 NZ_NPMD01000006.1 Protein Homology CDS 123302 123658 . + 0 ID=cds-WP_001120252.1;Parent=gene-CCO34_RS15245;Dbxref=GenBank:WP_001120252.1;Name=WP_001120252.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=CCO34_RS15245;product=glycoside hydrolase family protein;protein_id=WP_001120252.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 123664 124266 . - . ID=gene-CCO34_RS15250;Name=CCO34_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15250;old_locus_tag=CCO34_15245 NZ_NPMD01000006.1 Protein Homology CDS 123664 124266 . - 0 ID=cds-WP_001196081.1;Parent=gene-CCO34_RS15250;Dbxref=GenBank:WP_001196081.1;Name=WP_001196081.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=CCO34_RS15250;product=response regulator transcription factor;protein_id=WP_001196081.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 124896 125795 . + . ID=gene-CCO34_RS15255;Name=CCO34_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15255;old_locus_tag=CCO34_15250 NZ_NPMD01000006.1 Protein Homology CDS 124896 125795 . + 0 ID=cds-WP_000358046.1;Parent=gene-CCO34_RS15255;Dbxref=GenBank:WP_000358046.1;Name=WP_000358046.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=CCO34_RS15255;product=LysR family transcriptional regulator;protein_id=WP_000358046.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 125868 126896 . + . ID=gene-CCO34_RS15260;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=CCO34_RS15260;old_locus_tag=CCO34_15255 NZ_NPMD01000006.1 Protein Homology CDS 125868 126896 . + 0 ID=cds-WP_000191231.1;Parent=gene-CCO34_RS15260;Dbxref=GenBank:WP_000191231.1;Name=WP_000191231.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=CCO34_RS15260;product=inner membrane protein YhjD;protein_id=WP_000191231.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 127247 128569 . + . ID=gene-CCO34_RS15265;Name=CCO34_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15265;old_locus_tag=CCO34_15260 NZ_NPMD01000006.1 Protein Homology CDS 127247 128569 . + 0 ID=cds-WP_001148981.1;Parent=gene-CCO34_RS15265;Dbxref=GenBank:WP_001148981.1;Name=WP_001148981.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=CCO34_RS15265;product=MFS transporter;protein_id=WP_001148981.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 128609 130669 . - . ID=gene-CCO34_RS15270;Name=CCO34_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15270;old_locus_tag=CCO34_15265 NZ_NPMD01000006.1 Protein Homology CDS 128609 130669 . - 0 ID=cds-WP_023225078.1;Parent=gene-CCO34_RS15270;Dbxref=GenBank:WP_023225078.1;Name=WP_023225078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=CCO34_RS15270;product=AsmA family protein;protein_id=WP_023225078.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 130779 131546 . - . ID=gene-CCO34_RS15275;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=CCO34_RS15275;old_locus_tag=CCO34_15270 NZ_NPMD01000006.1 Protein Homology CDS 130779 131546 . - 0 ID=cds-WP_000595626.1;Parent=gene-CCO34_RS15275;Dbxref=GenBank:WP_000595626.1;Name=WP_000595626.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=CCO34_RS15275;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595626.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 131775 132704 . + . ID=gene-CCO34_RS15280;Name=CCO34_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15280;old_locus_tag=CCO34_15275 NZ_NPMD01000006.1 Protein Homology CDS 131775 132704 . + 0 ID=cds-WP_000037575.1;Parent=gene-CCO34_RS15280;Dbxref=GenBank:WP_000037575.1;Name=WP_000037575.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=CCO34_RS15280;product=sugar kinase;protein_id=WP_000037575.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 132758 134245 . - . ID=gene-CCO34_RS15285;Name=CCO34_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15285;old_locus_tag=CCO34_15280 NZ_NPMD01000006.1 Protein Homology CDS 132758 134245 . - 0 ID=cds-WP_001163182.1;Parent=gene-CCO34_RS15285;Dbxref=GenBank:WP_001163182.1;Name=WP_001163182.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=CCO34_RS15285;product=M16 family metallopeptidase;protein_id=WP_001163182.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 134465 135751 . - . ID=gene-CCO34_RS15290;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=CCO34_RS15290;old_locus_tag=CCO34_15285 NZ_NPMD01000006.1 Protein Homology CDS 134465 135751 . - 0 ID=cds-WP_000858228.1;Parent=gene-CCO34_RS15290;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=CCO34_RS15290;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 135909 137915 . - . ID=gene-CCO34_RS15295;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=CCO34_RS15295;old_locus_tag=CCO34_15290 NZ_NPMD01000006.1 Protein Homology CDS 135909 137915 . - 0 ID=cds-WP_094965468.1;Parent=gene-CCO34_RS15295;Dbxref=GenBank:WP_094965468.1;Name=WP_094965468.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=CCO34_RS15295;product=biofilm formation regulator HmsP;protein_id=WP_094965468.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 138089 141631 . - . ID=gene-CCO34_RS15305;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=CCO34_RS15305;old_locus_tag=CCO34_15300 NZ_NPMD01000006.1 Protein Homology CDS 138089 141631 . - 0 ID=cds-WP_094965469.1;Parent=gene-CCO34_RS15305;Dbxref=GenBank:WP_094965469.1;Name=WP_094965469.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=CCO34_RS15305;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_094965469.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 141613 142722 . - . ID=gene-CCO34_RS15310;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=CCO34_RS15310;old_locus_tag=CCO34_15305 NZ_NPMD01000006.1 Protein Homology CDS 141613 142722 . - 0 ID=cds-WP_001522101.1;Parent=gene-CCO34_RS15310;Dbxref=GenBank:WP_001522101.1;Name=WP_001522101.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=CCO34_RS15310;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_001522101.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 142726 145026 . - . ID=gene-CCO34_RS15315;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=CCO34_RS15315;old_locus_tag=CCO34_15310 NZ_NPMD01000006.1 Protein Homology CDS 142726 145026 . - 0 ID=cds-WP_001748888.1;Parent=gene-CCO34_RS15315;Dbxref=GenBank:WP_001748888.1;Name=WP_001748888.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=CCO34_RS15315;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_001748888.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 145037 147661 . - . ID=gene-CCO34_RS15320;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=CCO34_RS15320;old_locus_tag=CCO34_15315 NZ_NPMD01000006.1 Protein Homology CDS 145037 147661 . - 0 ID=cds-WP_001275340.1;Parent=gene-CCO34_RS15320;Dbxref=GenBank:WP_001275340.1;Name=WP_001275340.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=CCO34_RS15320;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_001275340.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 147658 148410 . - . ID=gene-CCO34_RS15325;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=CCO34_RS15325;old_locus_tag=CCO34_15320 NZ_NPMD01000006.1 Protein Homology CDS 147658 148410 . - 0 ID=cds-WP_000996120.1;Parent=gene-CCO34_RS15325;Dbxref=GenBank:WP_000996120.1;Name=WP_000996120.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=CCO34_RS15325;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996120.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 148411 148614 . - . ID=gene-CCO34_RS15330;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=CCO34_RS15330;old_locus_tag=CCO34_15325 NZ_NPMD01000006.1 Protein Homology CDS 148411 148614 . - 0 ID=cds-WP_000282616.1;Parent=gene-CCO34_RS15330;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=CCO34_RS15330;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 148859 150430 . + . ID=gene-CCO34_RS15335;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=CCO34_RS15335;old_locus_tag=CCO34_15330 NZ_NPMD01000006.1 Protein Homology CDS 148859 150430 . + 0 ID=cds-WP_001205771.1;Parent=gene-CCO34_RS15335;Dbxref=GenBank:WP_001205771.1;Name=WP_001205771.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=CCO34_RS15335;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001205771.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 150427 150618 . + . ID=gene-CCO34_RS15340;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=CCO34_RS15340;old_locus_tag=CCO34_15335 NZ_NPMD01000006.1 Protein Homology CDS 150427 150618 . + 0 ID=cds-WP_000988321.1;Parent=gene-CCO34_RS15340;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=CCO34_RS15340;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 150615 152294 . + . ID=gene-CCO34_RS15345;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=CCO34_RS15345;old_locus_tag=CCO34_15340 NZ_NPMD01000006.1 Protein Homology CDS 150615 152294 . + 0 ID=cds-WP_000192022.1;Parent=gene-CCO34_RS15345;Dbxref=GenBank:WP_000192022.1;Name=WP_000192022.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=CCO34_RS15345;product=cellulose biosynthesis protein BcsG;protein_id=WP_000192022.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 152376 152483 . - . ID=gene-CCO34_RS15350;Name=CCO34_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15350;old_locus_tag=CCO34_15345 NZ_NPMD01000006.1 Protein Homology CDS 152376 152483 . - 0 ID=cds-WP_001537650.1;Parent=gene-CCO34_RS15350;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=CCO34_RS15350;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11 NZ_NPMD01000006.1 RefSeq pseudogene 152856 153008 . + . ID=gene-CCO34_RS25830;Name=CCO34_RS25830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25830;old_locus_tag=CCO34_15355;partial=true;pseudo=true;start_range=.,152856 NZ_NPMD01000006.1 Protein Homology CDS 152856 153008 . + 0 ID=cds-CCO34_RS25830;Parent=gene-CCO34_RS25830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.6;locus_tag=CCO34_RS25830;partial=true;product=PLP-dependent transferase;pseudo=true;start_range=.,152856;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 153126 154424 . + . ID=gene-CCO34_RS15365;Name=CCO34_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15365;old_locus_tag=CCO34_15360 NZ_NPMD01000006.1 Protein Homology CDS 153126 154424 . + 0 ID=cds-WP_094965471.1;Parent=gene-CCO34_RS15365;Dbxref=GenBank:WP_094965471.1;Name=WP_094965471.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=CCO34_RS15365;product=aromatic amino acid transport family protein;protein_id=WP_094965471.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 154525 155538 . - . ID=gene-CCO34_RS15370;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=CCO34_RS15370;old_locus_tag=CCO34_15365 NZ_NPMD01000006.1 Protein Homology CDS 154525 155538 . - 0 ID=cds-WP_000103563.1;Parent=gene-CCO34_RS15370;Dbxref=GenBank:WP_000103563.1;Name=WP_000103563.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=CCO34_RS15370;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000103563.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 155535 156518 . - . ID=gene-CCO34_RS15375;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=CCO34_RS15375;old_locus_tag=CCO34_15370 NZ_NPMD01000006.1 Protein Homology CDS 155535 156518 . - 0 ID=cds-WP_001196509.1;Parent=gene-CCO34_RS15375;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=CCO34_RS15375;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 156529 157431 . - . ID=gene-CCO34_RS15380;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=CCO34_RS15380;old_locus_tag=CCO34_15375 NZ_NPMD01000006.1 Protein Homology CDS 156529 157431 . - 0 ID=cds-WP_094965473.1;Parent=gene-CCO34_RS15380;Dbxref=GenBank:WP_094965473.1;Name=WP_094965473.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=CCO34_RS15380;product=dipeptide ABC transporter permease DppC;protein_id=WP_094965473.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 157441 158460 . - . ID=gene-CCO34_RS15385;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=CCO34_RS15385;old_locus_tag=CCO34_15380 NZ_NPMD01000006.1 Protein Homology CDS 157441 158460 . - 0 ID=cds-WP_000938843.1;Parent=gene-CCO34_RS15385;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=CCO34_RS15385;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 158617 160224 . - . ID=gene-CCO34_RS15390;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=CCO34_RS15390;old_locus_tag=CCO34_15385 NZ_NPMD01000006.1 Protein Homology CDS 158617 160224 . - 0 ID=cds-WP_000028047.1;Parent=gene-CCO34_RS15390;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=CCO34_RS15390;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 160780 162105 . - . ID=gene-CCO34_RS15395;Name=CCO34_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15395;old_locus_tag=CCO34_15390 NZ_NPMD01000006.1 Protein Homology CDS 160780 162105 . - 0 ID=cds-WP_001136079.1;Parent=gene-CCO34_RS15395;Dbxref=GenBank:WP_001136079.1;Name=WP_001136079.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=CCO34_RS15395;product=uracil-xanthine permease family protein;protein_id=WP_001136079.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 162163 163287 . - . ID=gene-CCO34_RS15400;Name=CCO34_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15400;old_locus_tag=CCO34_15395 NZ_NPMD01000006.1 Protein Homology CDS 162163 163287 . - 0 ID=cds-WP_000940830.1;Parent=gene-CCO34_RS15400;Dbxref=GenBank:WP_000940830.1;Name=WP_000940830.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=CCO34_RS15400;product=aryl-sulfate sulfotransferase;protein_id=WP_000940830.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 163437 164444 . + . ID=gene-CCO34_RS15405;Name=CCO34_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15405;old_locus_tag=CCO34_15400 NZ_NPMD01000006.1 Protein Homology CDS 163437 164444 . + 0 ID=cds-WP_094965474.1;Parent=gene-CCO34_RS15405;Dbxref=GenBank:WP_094965474.1;Name=WP_094965474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=CCO34_RS15405;product=substrate-binding domain-containing protein;protein_id=WP_094965474.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 164436 164552 . - . ID=gene-CCO34_RS15410;Name=CCO34_RS15410;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS15410;old_locus_tag=CCO34_15405 NZ_NPMD01000006.1 cmsearch ncRNA 164436 164552 . - . ID=rna-CCO34_RS15410;Parent=gene-CCO34_RS15410;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS15410;product=RtT sRNA NZ_NPMD01000006.1 cmsearch exon 164436 164552 . - . ID=exon-CCO34_RS15410-1;Parent=rna-CCO34_RS15410;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS15410;product=RtT sRNA NZ_NPMD01000006.1 RefSeq gene 164589 164722 . - . ID=gene-CCO34_RS15415;Name=CCO34_RS15415;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS15415;old_locus_tag=CCO34_15410 NZ_NPMD01000006.1 cmsearch ncRNA 164589 164722 . - . ID=rna-CCO34_RS15415;Parent=gene-CCO34_RS15415;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS15415;product=RtT sRNA NZ_NPMD01000006.1 cmsearch exon 164589 164722 . - . ID=exon-CCO34_RS15415-1;Parent=rna-CCO34_RS15415;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS15415;product=RtT sRNA NZ_NPMD01000006.1 RefSeq gene 164757 164890 . - . ID=gene-CCO34_RS15420;Name=CCO34_RS15420;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO34_RS15420;old_locus_tag=CCO34_15415 NZ_NPMD01000006.1 cmsearch ncRNA 164757 164890 . - . ID=rna-CCO34_RS15420;Parent=gene-CCO34_RS15420;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS15420;product=RtT sRNA NZ_NPMD01000006.1 cmsearch exon 164757 164890 . - . ID=exon-CCO34_RS15420-1;Parent=rna-CCO34_RS15420;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS15420;product=RtT sRNA NZ_NPMD01000006.1 RefSeq gene 164925 165001 . - . ID=gene-CCO34_RS15425;Name=CCO34_RS15425;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS15425;old_locus_tag=CCO34_15420 NZ_NPMD01000006.1 tRNAscan-SE tRNA 164925 165001 . - . ID=rna-CCO34_RS15425;Parent=gene-CCO34_RS15425;anticodon=(pos:complement(164965..164967));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS15425;product=tRNA-Pro NZ_NPMD01000006.1 tRNAscan-SE exon 164925 165001 . - . ID=exon-CCO34_RS15425-1;Parent=rna-CCO34_RS15425;anticodon=(pos:complement(164965..164967));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS15425;product=tRNA-Pro NZ_NPMD01000006.1 RefSeq gene 165092 166783 . - . ID=gene-CCO34_RS15430;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=CCO34_RS15430;old_locus_tag=CCO34_15425 NZ_NPMD01000006.1 Protein Homology CDS 165092 166783 . - 0 ID=cds-WP_001269263.1;Parent=gene-CCO34_RS15430;Dbxref=GenBank:WP_001269263.1;Name=WP_001269263.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=CCO34_RS15430;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269263.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 167001 167528 . - . ID=gene-CCO34_RS15435;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=CCO34_RS15435;old_locus_tag=CCO34_15430 NZ_NPMD01000006.1 Protein Homology CDS 167001 167528 . - 0 ID=cds-WP_000792959.1;Parent=gene-CCO34_RS15435;Dbxref=GenBank:WP_000792959.1;Name=WP_000792959.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462537.1;locus_tag=CCO34_RS15435;product=long polar fimbrial protein LpfE;protein_id=WP_000792959.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 167534 168613 . - . ID=gene-CCO34_RS15440;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=CCO34_RS15440;old_locus_tag=CCO34_15435 NZ_NPMD01000006.1 Protein Homology CDS 167534 168613 . - 0 ID=cds-WP_047605522.1;Parent=gene-CCO34_RS15440;Dbxref=GenBank:WP_047605522.1;Name=WP_047605522.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462538.1;locus_tag=CCO34_RS15440;product=long polar fimbrial protein LpfD;protein_id=WP_047605522.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 168631 171159 . - . ID=gene-CCO34_RS15445;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=protein_coding;locus_tag=CCO34_RS15445;old_locus_tag=CCO34_15440 NZ_NPMD01000006.1 Protein Homology CDS 168631 171159 . - 0 ID=cds-WP_031605995.1;Parent=gene-CCO34_RS15445;Dbxref=GenBank:WP_031605995.1;Name=WP_031605995.1;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462539.1;locus_tag=CCO34_RS15445;product=outer membrane usher protein LpfC;protein_id=WP_031605995.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 171182 171880 . - . ID=gene-CCO34_RS15450;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=CCO34_RS15450;old_locus_tag=CCO34_15445 NZ_NPMD01000006.1 Protein Homology CDS 171182 171880 . - 0 ID=cds-WP_001082125.1;Parent=gene-CCO34_RS15450;Dbxref=GenBank:WP_001082125.1;Name=WP_001082125.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=CCO34_RS15450;product=long polar fimbrial chaperone LpfB;protein_id=WP_001082125.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 171965 172489 . - . ID=gene-CCO34_RS15455;Name=lpfA;gbkey=Gene;gene=lpfA;gene_biotype=protein_coding;locus_tag=CCO34_RS15455;old_locus_tag=CCO34_15450 NZ_NPMD01000006.1 Protein Homology CDS 171965 172489 . - 0 ID=cds-WP_001518613.1;Parent=gene-CCO34_RS15455;Dbxref=GenBank:WP_001518613.1;Name=WP_001518613.1;gbkey=CDS;gene=lpfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519917.1;locus_tag=CCO34_RS15455;product=long polar fimbria major subunit LpfA;protein_id=WP_001518613.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 173007 173711 . - . ID=gene-CCO34_RS15460;Name=CCO34_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15460;old_locus_tag=CCO34_15455 NZ_NPMD01000006.1 Protein Homology CDS 173007 173711 . - 0 ID=cds-WP_000637071.1;Parent=gene-CCO34_RS15460;Dbxref=GenBank:WP_000637071.1;Name=WP_000637071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=CCO34_RS15460;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637071.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 173868 174449 . + . ID=gene-CCO34_RS15465;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=CCO34_RS15465;old_locus_tag=CCO34_15460 NZ_NPMD01000006.1 Protein Homology CDS 173868 174449 . + 0 ID=cds-WP_094913596.1;Parent=gene-CCO34_RS15465;Dbxref=GenBank:WP_094913596.1;Name=WP_094913596.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=CCO34_RS15465;product=DNA-3-methyladenine glycosylase I;protein_id=WP_094913596.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 174427 174867 . + . ID=gene-CCO34_RS15470;Name=CCO34_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15470;old_locus_tag=CCO34_15465 NZ_NPMD01000006.1 Protein Homology CDS 174427 174867 . + 0 ID=cds-WP_000619902.1;Parent=gene-CCO34_RS15470;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=CCO34_RS15470;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 174836 177169 . - . ID=gene-CCO34_RS15475;Name=CCO34_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15475;old_locus_tag=CCO34_15470 NZ_NPMD01000006.1 Protein Homology CDS 174836 177169 . - 0 ID=cds-WP_094965476.1;Parent=gene-CCO34_RS15475;Dbxref=GenBank:WP_094965476.1;Name=WP_094965476.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=CCO34_RS15475;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_094965476.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 177322 177984 . + . ID=gene-CCO34_RS15480;Name=CCO34_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15480;old_locus_tag=CCO34_15475 NZ_NPMD01000006.1 Protein Homology CDS 177322 177984 . + 0 ID=cds-WP_000747544.1;Parent=gene-CCO34_RS15480;Dbxref=GenBank:WP_000747544.1;Name=WP_000747544.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=CCO34_RS15480;product=OmpA family lipoprotein;protein_id=WP_000747544.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 178203 179177 . + . ID=gene-CCO34_RS15485;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=CCO34_RS15485;old_locus_tag=CCO34_15480 NZ_NPMD01000006.1 Protein Homology CDS 178203 179177 . + 0 ID=cds-WP_000804690.1;Parent=gene-CCO34_RS15485;Dbxref=GenBank:WP_000804690.1;Name=WP_000804690.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=CCO34_RS15485;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000804690.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 179227 179937 . - . ID=gene-CCO34_RS15490;Name=CCO34_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15490;old_locus_tag=CCO34_15485 NZ_NPMD01000006.1 Protein Homology CDS 179227 179937 . - 0 ID=cds-WP_000190524.1;Parent=gene-CCO34_RS15490;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=CCO34_RS15490;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 180376 180666 . + . ID=gene-CCO34_RS15495;Name=CCO34_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15495;old_locus_tag=CCO34_15490 NZ_NPMD01000006.1 Protein Homology CDS 180376 180666 . + 0 ID=cds-WP_000455790.1;Parent=gene-CCO34_RS15495;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=CCO34_RS15495;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 180954 181166 . + . ID=gene-CCO34_RS15500;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO34_RS15500;old_locus_tag=CCO34_15495 NZ_NPMD01000006.1 Protein Homology CDS 180954 181166 . + 0 ID=cds-WP_000014594.1;Parent=gene-CCO34_RS15500;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=CCO34_RS15500;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 181339 181878 . + . ID=gene-CCO34_RS15505;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=CCO34_RS15505;old_locus_tag=CCO34_15500 NZ_NPMD01000006.1 Protein Homology CDS 181339 181878 . + 0 ID=cds-WP_000047148.1;Parent=gene-CCO34_RS15505;Dbxref=GenBank:WP_000047148.1;Name=WP_000047148.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=CCO34_RS15505;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_000047148.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 182252 182737 . - . ID=gene-CCO34_RS15510;Name=CCO34_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15510;old_locus_tag=CCO34_15505 NZ_NPMD01000006.1 Protein Homology CDS 182252 182737 . - 0 ID=cds-WP_000533911.1;Parent=gene-CCO34_RS15510;Dbxref=GenBank:WP_000533911.1;Name=WP_000533911.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=CCO34_RS15510;product=GNAT family N-acetyltransferase;protein_id=WP_000533911.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 182725 183012 . - . ID=gene-CCO34_RS15515;Name=CCO34_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15515;old_locus_tag=CCO34_15510 NZ_NPMD01000006.1 Protein Homology CDS 182725 183012 . - 0 ID=cds-WP_000965886.1;Parent=gene-CCO34_RS15515;Dbxref=GenBank:WP_000965886.1;Name=WP_000965886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=CCO34_RS15515;product=DUF1778 domain-containing protein;protein_id=WP_000965886.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 183208 184242 . + . ID=gene-CCO34_RS15520;Name=CCO34_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15520;old_locus_tag=CCO34_15515 NZ_NPMD01000006.1 Protein Homology CDS 183208 184242 . + 0 ID=cds-WP_001240754.1;Parent=gene-CCO34_RS15520;Dbxref=GenBank:WP_001240754.1;Name=WP_001240754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240754.1;locus_tag=CCO34_RS15520;product=CHAT domain-containing protein;protein_id=WP_001240754.1;transl_table=11 NZ_NPMD01000006.1 RefSeq pseudogene 184445 184843 . - . ID=gene-CCO34_RS15525;Name=CCO34_RS15525;end_range=184843,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS15525;old_locus_tag=CCO34_15520;partial=true;pseudo=true NZ_NPMD01000006.1 Protein Homology CDS 184445 184843 . - 0 ID=cds-CCO34_RS15525;Parent=gene-CCO34_RS15525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=184843,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=CCO34_RS15525;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 185233 187302 . - . ID=gene-CCO34_RS15530;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=CCO34_RS15530;old_locus_tag=CCO34_15525 NZ_NPMD01000006.1 Protein Homology CDS 185233 187302 . - 0 ID=cds-WP_001291736.1;Parent=gene-CCO34_RS15530;Dbxref=GenBank:WP_001291736.1;Name=WP_001291736.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=CCO34_RS15530;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291736.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 187312 188223 . - . ID=gene-CCO34_RS15535;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=CCO34_RS15535;old_locus_tag=CCO34_15530 NZ_NPMD01000006.1 Protein Homology CDS 187312 188223 . - 0 ID=cds-WP_001168551.1;Parent=gene-CCO34_RS15535;Dbxref=GenBank:WP_001168551.1;Name=WP_001168551.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=CCO34_RS15535;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168551.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 188362 188664 . - . ID=gene-CCO34_RS15540;Name=CCO34_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15540;old_locus_tag=CCO34_15535 NZ_NPMD01000006.1 Protein Homology CDS 188362 188664 . - 0 ID=cds-WP_000605590.1;Parent=gene-CCO34_RS15540;Dbxref=GenBank:WP_000605590.1;Name=WP_000605590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=CCO34_RS15540;product=YsaB family lipoprotein;protein_id=WP_000605590.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 188830 189825 . + . ID=gene-CCO34_RS15550;Name=CCO34_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15550;old_locus_tag=CCO34_15545 NZ_NPMD01000006.1 Protein Homology CDS 188830 189825 . + 0 ID=cds-WP_001182581.1;Parent=gene-CCO34_RS15550;Dbxref=GenBank:WP_001182581.1;Name=WP_001182581.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=CCO34_RS15550;product=acyltransferase;protein_id=WP_001182581.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 189848 190201 . - . ID=gene-CCO34_RS15555;Name=CCO34_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15555;old_locus_tag=CCO34_15550 NZ_NPMD01000006.1 Protein Homology CDS 189848 190201 . - 0 ID=cds-WP_000340935.1;Parent=gene-CCO34_RS15555;Dbxref=GenBank:WP_000340935.1;Name=WP_000340935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=CCO34_RS15555;product=YiaA/YiaB family protein;protein_id=WP_000340935.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 190376 191830 . - . ID=gene-CCO34_RS15560;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=CCO34_RS15560;old_locus_tag=CCO34_15555 NZ_NPMD01000006.1 Protein Homology CDS 190376 191830 . - 0 ID=cds-WP_000275328.1;Parent=gene-CCO34_RS15560;Dbxref=GenBank:WP_000275328.1;Name=WP_000275328.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=CCO34_RS15560;product=xylulokinase;protein_id=WP_000275328.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 191930 193252 . - . ID=gene-CCO34_RS15565;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=CCO34_RS15565;old_locus_tag=CCO34_15560 NZ_NPMD01000006.1 Protein Homology CDS 191930 193252 . - 0 ID=cds-WP_001149564.1;Parent=gene-CCO34_RS15565;Dbxref=GenBank:WP_001149564.1;Name=WP_001149564.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=CCO34_RS15565;product=xylose isomerase;protein_id=WP_001149564.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 193615 194793 . + . ID=gene-CCO34_RS15575;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=CCO34_RS15575;old_locus_tag=CCO34_15570 NZ_NPMD01000006.1 Protein Homology CDS 193615 194793 . + 0 ID=cds-WP_000459824.1;Parent=gene-CCO34_RS15575;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=CCO34_RS15575;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 194854 195678 . - . ID=gene-CCO34_RS15580;Name=CCO34_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15580;old_locus_tag=CCO34_15575 NZ_NPMD01000006.1 Protein Homology CDS 194854 195678 . - 0 ID=cds-WP_001575119.1;Parent=gene-CCO34_RS15580;Dbxref=GenBank:WP_001575119.1;Name=WP_001575119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=CCO34_RS15580;product=protein bax;protein_id=WP_001575119.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 195994 198021 . + . ID=gene-CCO34_RS15585;Name=CCO34_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15585;old_locus_tag=CCO34_15580 NZ_NPMD01000006.1 Protein Homology CDS 195994 198021 . + 0 ID=cds-WP_000761324.1;Parent=gene-CCO34_RS15585;Dbxref=GenBank:WP_000761324.1;Name=WP_000761324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=CCO34_RS15585;product=alpha-amylase;protein_id=WP_000761324.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 198195 199445 . + . ID=gene-CCO34_RS15590;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=CCO34_RS15590;old_locus_tag=CCO34_15585 NZ_NPMD01000006.1 Protein Homology CDS 198195 199445 . + 0 ID=cds-WP_000144382.1;Parent=gene-CCO34_RS15590;Dbxref=GenBank:WP_000144382.1;Name=WP_000144382.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=CCO34_RS15590;product=valine--pyruvate transaminase;protein_id=WP_000144382.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 199482 199955 . - . ID=gene-CCO34_RS15595;Name=CCO34_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15595;old_locus_tag=CCO34_15590 NZ_NPMD01000006.1 Protein Homology CDS 199482 199955 . - 0 ID=cds-WP_001078824.1;Parent=gene-CCO34_RS15595;Dbxref=GenBank:WP_001078824.1;Name=WP_001078824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=CCO34_RS15595;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078824.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 200072 200872 . - . ID=gene-CCO34_RS15600;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=CCO34_RS15600;old_locus_tag=CCO34_15595 NZ_NPMD01000006.1 Protein Homology CDS 200072 200872 . - 0 ID=cds-WP_000081341.1;Parent=gene-CCO34_RS15600;Dbxref=GenBank:WP_000081341.1;Name=WP_000081341.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=CCO34_RS15600;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081341.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 201102 202100 . + . ID=gene-CCO34_RS15605;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=CCO34_RS15605;old_locus_tag=CCO34_15600 NZ_NPMD01000006.1 Protein Homology CDS 201102 202100 . + 0 ID=cds-WP_000869012.1;Parent=gene-CCO34_RS15605;Dbxref=GenBank:WP_000869012.1;Name=WP_000869012.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=CCO34_RS15605;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869012.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 202112 202576 . + . ID=gene-CCO34_RS15610;Name=CCO34_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15610;old_locus_tag=CCO34_15605 NZ_NPMD01000006.1 Protein Homology CDS 202112 202576 . + 0 ID=cds-WP_000576100.1;Parent=gene-CCO34_RS15610;Dbxref=GenBank:WP_000576100.1;Name=WP_000576100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=CCO34_RS15610;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576100.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 202600 203532 . + . ID=gene-CCO34_RS15615;Name=CCO34_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15615;old_locus_tag=CCO34_15610 NZ_NPMD01000006.1 Protein Homology CDS 202600 203532 . + 0 ID=cds-WP_000794983.1;Parent=gene-CCO34_RS15615;Dbxref=GenBank:WP_000794983.1;Name=WP_000794983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=CCO34_RS15615;product=DUF4862 family protein;protein_id=WP_000794983.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 203671 204144 . + . ID=gene-CCO34_RS15620;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=CCO34_RS15620;old_locus_tag=CCO34_15615 NZ_NPMD01000006.1 Protein Homology CDS 203671 204144 . + 0 ID=cds-WP_000832312.1;Parent=gene-CCO34_RS15620;Dbxref=GenBank:WP_000832312.1;Name=WP_000832312.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=CCO34_RS15620;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832312.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 204147 205424 . + . ID=gene-CCO34_RS15625;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=CCO34_RS15625;old_locus_tag=CCO34_15620 NZ_NPMD01000006.1 Protein Homology CDS 204147 205424 . + 0 ID=cds-WP_000301822.1;Parent=gene-CCO34_RS15625;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=CCO34_RS15625;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 205436 206422 . + . ID=gene-CCO34_RS15630;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=CCO34_RS15630;old_locus_tag=CCO34_15625 NZ_NPMD01000006.1 Protein Homology CDS 205436 206422 . + 0 ID=cds-WP_000766340.1;Parent=gene-CCO34_RS15630;Dbxref=GenBank:WP_000766340.1;Name=WP_000766340.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=CCO34_RS15630;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766340.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 206426 207922 . + . ID=gene-CCO34_RS15635;Name=CCO34_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15635;old_locus_tag=CCO34_15630 NZ_NPMD01000006.1 Protein Homology CDS 206426 207922 . + 0 ID=cds-WP_023241059.1;Parent=gene-CCO34_RS15635;Dbxref=GenBank:WP_023241059.1;Name=WP_023241059.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=CCO34_RS15635;product=FGGY-family carbohydrate kinase;protein_id=WP_023241059.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 207919 208569 . + . ID=gene-CCO34_RS15640;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO34_RS15640;old_locus_tag=CCO34_15635 NZ_NPMD01000006.1 Protein Homology CDS 207919 208569 . + 0 ID=cds-WP_020437733.1;Parent=gene-CCO34_RS15640;Dbxref=GenBank:WP_020437733.1;Name=WP_020437733.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089526.1;locus_tag=CCO34_RS15640;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_020437733.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 208574 209434 . + . ID=gene-CCO34_RS15645;Name=CCO34_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15645;old_locus_tag=CCO34_15640 NZ_NPMD01000006.1 Protein Homology CDS 208574 209434 . + 0 ID=cds-WP_023993478.1;Parent=gene-CCO34_RS15645;Dbxref=GenBank:WP_023993478.1;Name=WP_023993478.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=CCO34_RS15645;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_023993478.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 209428 210123 . + . ID=gene-CCO34_RS15650;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO34_RS15650;old_locus_tag=CCO34_15645 NZ_NPMD01000006.1 Protein Homology CDS 209428 210123 . + 0 ID=cds-WP_000893174.1;Parent=gene-CCO34_RS15650;Dbxref=GenBank:WP_000893174.1;Name=WP_000893174.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=CCO34_RS15650;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893174.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 210284 211099 . - . ID=gene-CCO34_RS15655;Name=CCO34_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15655;old_locus_tag=CCO34_15650 NZ_NPMD01000006.1 Protein Homology CDS 210284 211099 . - 0 ID=cds-WP_080180923.1;Parent=gene-CCO34_RS15655;Dbxref=GenBank:WP_080180923.1;Name=WP_080180923.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=CCO34_RS15655;product=AraC family transcriptional regulator;protein_id=WP_080180923.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 211363 213318 . + . ID=gene-CCO34_RS15660;Name=CCO34_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15660;old_locus_tag=CCO34_15655 NZ_NPMD01000006.1 Protein Homology CDS 211363 213318 . + 0 ID=cds-WP_080180922.1;Parent=gene-CCO34_RS15660;Dbxref=GenBank:WP_080180922.1;Name=WP_080180922.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=CCO34_RS15660;product=glycoside hydrolase family 127 protein;protein_id=WP_080180922.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 213435 214973 . - . ID=gene-CCO34_RS15665;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=CCO34_RS15665;old_locus_tag=CCO34_15660 NZ_NPMD01000006.1 Protein Homology CDS 213435 214973 . - 0 ID=cds-WP_000183988.1;Parent=gene-CCO34_RS15665;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=CCO34_RS15665;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 215142 216023 . + . ID=gene-CCO34_RS15670;Name=CCO34_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15670;old_locus_tag=CCO34_15665 NZ_NPMD01000006.1 Protein Homology CDS 215142 216023 . + 0 ID=cds-WP_001188269.1;Parent=gene-CCO34_RS15670;Dbxref=GenBank:WP_001188269.1;Name=WP_001188269.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=CCO34_RS15670;product=ROK family protein;protein_id=WP_001188269.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 216308 218158 . - . ID=gene-CCO34_RS15675;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=CCO34_RS15675;old_locus_tag=CCO34_15670 NZ_NPMD01000006.1 Protein Homology CDS 216308 218158 . - 0 ID=cds-WP_080180921.1;Parent=gene-CCO34_RS15675;Dbxref=GenBank:WP_080180921.1;Name=WP_080180921.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=CCO34_RS15675;product=selenocysteine-specific translation elongation factor;protein_id=WP_080180921.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 218155 219546 . - . ID=gene-CCO34_RS15680;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=CCO34_RS15680;old_locus_tag=CCO34_15675 NZ_NPMD01000006.1 Protein Homology CDS 218155 219546 . - 0 ID=cds-WP_000200198.1;Parent=gene-CCO34_RS15680;Dbxref=GenBank:WP_000200198.1;Name=WP_000200198.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=CCO34_RS15680;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000200198.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 219645 220253 . - . ID=gene-CCO34_RS15685;Name=CCO34_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15685;old_locus_tag=CCO34_15680 NZ_NPMD01000006.1 Protein Homology CDS 219645 220253 . - 0 ID=cds-WP_000766685.1;Parent=gene-CCO34_RS15685;Dbxref=GenBank:WP_000766685.1;Name=WP_000766685.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=CCO34_RS15685;product=glutathione S-transferase;protein_id=WP_000766685.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 220729 222645 . + . ID=gene-CCO34_RS15690;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=CCO34_RS15690;old_locus_tag=CCO34_15685 NZ_NPMD01000006.1 Protein Homology CDS 220729 222645 . + 0 ID=cds-WP_000093287.1;Parent=gene-CCO34_RS15690;Dbxref=GenBank:WP_000093287.1;Name=WP_000093287.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=CCO34_RS15690;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093287.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 222866 224014 . + . ID=gene-CCO34_RS15695;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=CCO34_RS15695;old_locus_tag=CCO34_15690 NZ_NPMD01000006.1 Protein Homology CDS 222866 224014 . + 0 ID=cds-WP_072104882.1;Parent=gene-CCO34_RS15695;Dbxref=GenBank:WP_072104882.1;Name=WP_072104882.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=CCO34_RS15695;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_072104882.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 224011 224601 . + . ID=gene-CCO34_RS15700;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=CCO34_RS15700;old_locus_tag=CCO34_15695 NZ_NPMD01000006.1 Protein Homology CDS 224011 224601 . + 0 ID=cds-WP_000193201.1;Parent=gene-CCO34_RS15700;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=CCO34_RS15700;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 224611 224820 . - . ID=gene-CCO34_RS15705;Name=CCO34_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15705;old_locus_tag=CCO34_15700 NZ_NPMD01000006.1 Protein Homology CDS 224611 224820 . - 0 ID=cds-WP_001062558.1;Parent=gene-CCO34_RS15705;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=CCO34_RS15705;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 225111 225473 . + . ID=gene-CCO34_RS15710;Name=CCO34_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15710;old_locus_tag=CCO34_15705 NZ_NPMD01000006.1 Protein Homology CDS 225111 225473 . + 0 ID=cds-WP_000665687.1;Parent=gene-CCO34_RS15710;Dbxref=GenBank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=CCO34_RS15710;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 225960 226643 . + . ID=gene-CCO34_RS15715;Name=CCO34_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15715;old_locus_tag=CCO34_15710 NZ_NPMD01000006.1 Protein Homology CDS 225960 226643 . + 0 ID=cds-WP_024797492.1;Parent=gene-CCO34_RS15715;Dbxref=GenBank:WP_024797492.1;Name=WP_024797492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=CCO34_RS15715;product=DUF3251 domain-containing protein;protein_id=WP_024797492.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 226687 231072 . + . ID=gene-CCO34_RS15720;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=CCO34_RS15720;old_locus_tag=CCO34_15715 NZ_NPMD01000006.1 Protein Homology CDS 226687 231072 . + 0 ID=cds-WP_080180920.1;Parent=gene-CCO34_RS15720;Dbxref=GenBank:WP_080180920.1;Name=WP_080180920.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=CCO34_RS15720;product=trimeric autotransporter adhesin SadA;protein_id=WP_080180920.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 231371 233026 . + . ID=gene-CCO34_RS15725;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=CCO34_RS15725;old_locus_tag=CCO34_15720 NZ_NPMD01000006.1 Protein Homology CDS 231371 233026 . + 0 ID=cds-WP_001055305.1;Parent=gene-CCO34_RS15725;Dbxref=GenBank:WP_001055305.1;Name=WP_001055305.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=CCO34_RS15725;product=L-lactate permease;protein_id=WP_001055305.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 233023 233799 . + . ID=gene-CCO34_RS15730;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=CCO34_RS15730;old_locus_tag=CCO34_15725 NZ_NPMD01000006.1 Protein Homology CDS 233023 233799 . + 0 ID=cds-WP_000636696.1;Parent=gene-CCO34_RS15730;Dbxref=GenBank:WP_000636696.1;Name=WP_000636696.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=CCO34_RS15730;product=transcriptional regulator LldR;protein_id=WP_000636696.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 233796 234986 . + . ID=gene-CCO34_RS15735;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=CCO34_RS15735;old_locus_tag=CCO34_15730 NZ_NPMD01000006.1 Protein Homology CDS 233796 234986 . + 0 ID=cds-WP_000586988.1;Parent=gene-CCO34_RS15735;Dbxref=GenBank:WP_000586988.1;Name=WP_000586988.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=CCO34_RS15735;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586988.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 235050 235523 . + . ID=gene-CCO34_RS15740;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CCO34_RS15740;old_locus_tag=CCO34_15735 NZ_NPMD01000006.1 Protein Homology CDS 235050 235523 . + 0 ID=cds-WP_000932336.1;Parent=gene-CCO34_RS15740;Dbxref=GenBank:WP_000932336.1;Name=WP_000932336.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=CCO34_RS15740;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932336.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 235591 236595 . - . ID=gene-CCO34_RS15745;Name=CCO34_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15745;old_locus_tag=CCO34_15740 NZ_NPMD01000006.1 Protein Homology CDS 235591 236595 . - 0 ID=cds-WP_001537635.1;Parent=gene-CCO34_RS15745;Dbxref=GenBank:WP_001537635.1;Name=WP_001537635.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=CCO34_RS15745;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001537635.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 236914 238110 . + . ID=gene-CCO34_RS15755;Name=CCO34_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15755;old_locus_tag=CCO34_15750 NZ_NPMD01000006.1 Protein Homology CDS 236914 238110 . + 0 ID=cds-WP_079801773.1;Parent=gene-CCO34_RS15755;Dbxref=GenBank:WP_079801773.1;Name=WP_079801773.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=CCO34_RS15755;product=L-talarate/galactarate dehydratase;protein_id=WP_079801773.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 238184 239494 . + . ID=gene-CCO34_RS15760;Name=CCO34_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15760;old_locus_tag=CCO34_15755 NZ_NPMD01000006.1 Protein Homology CDS 238184 239494 . + 0 ID=cds-WP_001092104.1;Parent=gene-CCO34_RS15760;Dbxref=GenBank:WP_001092104.1;Name=WP_001092104.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=CCO34_RS15760;product=MFS transporter;protein_id=WP_001092104.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 239577 240398 . - . ID=gene-CCO34_RS15765;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CCO34_RS15765;old_locus_tag=CCO34_15760 NZ_NPMD01000006.1 Protein Homology CDS 239577 240398 . - 0 ID=cds-WP_023243767.1;Parent=gene-CCO34_RS15765;Dbxref=GenBank:WP_023243767.1;Name=WP_023243767.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=CCO34_RS15765;product=serine O-acetyltransferase;protein_id=WP_023243767.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 240476 241495 . - . ID=gene-CCO34_RS15770;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=CCO34_RS15770;old_locus_tag=CCO34_15765 NZ_NPMD01000006.1 Protein Homology CDS 240476 241495 . - 0 ID=cds-WP_001076596.1;Parent=gene-CCO34_RS15770;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=CCO34_RS15770;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 241495 241962 . - . ID=gene-CCO34_RS15775;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=CCO34_RS15775;old_locus_tag=CCO34_15770 NZ_NPMD01000006.1 Protein Homology CDS 241495 241962 . - 0 ID=cds-WP_000003370.1;Parent=gene-CCO34_RS15775;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=CCO34_RS15775;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 242006 242257 . - . ID=gene-CCO34_RS15780;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=CCO34_RS15780;old_locus_tag=CCO34_15775 NZ_NPMD01000006.1 Protein Homology CDS 242006 242257 . - 0 ID=cds-WP_001273795.1;Parent=gene-CCO34_RS15780;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=CCO34_RS15780;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 242343 242774 . - . ID=gene-CCO34_RS15785;Name=CCO34_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15785;old_locus_tag=CCO34_15780 NZ_NPMD01000006.1 Protein Homology CDS 242343 242774 . - 0 ID=cds-WP_001156179.1;Parent=gene-CCO34_RS15785;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=CCO34_RS15785;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 243022 244566 . + . ID=gene-CCO34_RS15790;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=CCO34_RS15790;old_locus_tag=CCO34_15785 NZ_NPMD01000006.1 Protein Homology CDS 243022 244566 . + 0 ID=cds-WP_000116576.1;Parent=gene-CCO34_RS15790;Dbxref=GenBank:WP_000116576.1;Name=WP_000116576.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=CCO34_RS15790;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116576.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 244600 245859 . + . ID=gene-CCO34_RS15795;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=CCO34_RS15795;old_locus_tag=CCO34_15790 NZ_NPMD01000006.1 Protein Homology CDS 244600 245859 . + 0 ID=cds-WP_228770042.1;Parent=gene-CCO34_RS15795;Dbxref=GenBank:WP_228770042.1;Name=WP_228770042.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=CCO34_RS15795;product=murein hydrolase activator EnvC;protein_id=WP_228770042.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 245863 246825 . + . ID=gene-CCO34_RS15800;Name=CCO34_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15800;old_locus_tag=CCO34_15795 NZ_NPMD01000006.1 Protein Homology CDS 245863 246825 . + 0 ID=cds-WP_001135512.1;Parent=gene-CCO34_RS15800;Dbxref=GenBank:WP_001135512.1;Name=WP_001135512.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=CCO34_RS15800;product=divergent polysaccharide deacetylase family protein;protein_id=WP_001135512.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 246812 247846 . - . ID=gene-CCO34_RS15805;Name=CCO34_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15805;old_locus_tag=CCO34_15800 NZ_NPMD01000006.1 Protein Homology CDS 246812 247846 . - 0 ID=cds-WP_000798200.1;Parent=gene-CCO34_RS15805;Dbxref=GenBank:WP_000798200.1;Name=WP_000798200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=CCO34_RS15805;product=glycosyltransferase;protein_id=WP_000798200.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 248140 249165 . - . ID=gene-CCO34_RS15810;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=CCO34_RS15810;old_locus_tag=CCO34_15805 NZ_NPMD01000006.1 Protein Homology CDS 248140 249165 . - 0 ID=cds-WP_000645990.1;Parent=gene-CCO34_RS15810;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=CCO34_RS15810;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 249175 250371 . - . ID=gene-CCO34_RS15815;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=CCO34_RS15815;old_locus_tag=CCO34_15810 NZ_NPMD01000006.1 Protein Homology CDS 249175 250371 . - 0 ID=cds-WP_001213798.1;Parent=gene-CCO34_RS15815;Dbxref=GenBank:WP_001213798.1;Name=WP_001213798.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=CCO34_RS15815;product=glycine C-acetyltransferase;protein_id=WP_001213798.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 250574 251506 . + . ID=gene-CCO34_RS15820;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=CCO34_RS15820;old_locus_tag=CCO34_15815 NZ_NPMD01000006.1 Protein Homology CDS 250574 251506 . + 0 ID=cds-WP_000587773.1;Parent=gene-CCO34_RS15820;Dbxref=GenBank:WP_000587773.1;Name=WP_000587773.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=CCO34_RS15820;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587773.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 251509 252555 . + . ID=gene-CCO34_RS15825;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=CCO34_RS15825;old_locus_tag=CCO34_15820 NZ_NPMD01000006.1 Protein Homology CDS 251509 252555 . + 0 ID=cds-WP_000699192.1;Parent=gene-CCO34_RS15825;Dbxref=GenBank:WP_000699192.1;Name=WP_000699192.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=CCO34_RS15825;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699192.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 252555 253508 . + . ID=gene-CCO34_RS15830;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=CCO34_RS15830;old_locus_tag=CCO34_15825 NZ_NPMD01000006.1 Protein Homology CDS 252555 253508 . + 0 ID=cds-WP_001264621.1;Parent=gene-CCO34_RS15830;Dbxref=GenBank:WP_001264621.1;Name=WP_001264621.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=CCO34_RS15830;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264621.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 253548 254762 . + . ID=gene-CCO34_RS15835;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=CCO34_RS15835;old_locus_tag=CCO34_15830 NZ_NPMD01000006.1 Protein Homology CDS 253548 254762 . + 0 ID=cds-WP_000958448.1;Parent=gene-CCO34_RS15835;Dbxref=GenBank:WP_000958448.1;Name=WP_000958448.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=CCO34_RS15835;product=O-antigen ligase RfaL;protein_id=WP_000958448.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 254819 255964 . - . ID=gene-CCO34_RS15840;Name=CCO34_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15840;old_locus_tag=CCO34_15835 NZ_NPMD01000006.1 Protein Homology CDS 254819 255964 . - 0 ID=cds-WP_000591832.1;Parent=gene-CCO34_RS15840;Dbxref=GenBank:WP_000591832.1;Name=WP_000591832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=CCO34_RS15840;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591832.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 256064 256873 . - . ID=gene-CCO34_RS15845;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=CCO34_RS15845;old_locus_tag=CCO34_15840 NZ_NPMD01000006.1 Protein Homology CDS 256064 256873 . - 0 ID=cds-WP_000536017.1;Parent=gene-CCO34_RS15845;Dbxref=GenBank:WP_000536017.1;Name=WP_000536017.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=CCO34_RS15845;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536017.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 257023 257721 . - . ID=gene-CCO34_RS15850;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=CCO34_RS15850;old_locus_tag=CCO34_15845 NZ_NPMD01000006.1 Protein Homology CDS 257023 257721 . - 0 ID=cds-WP_000582817.1;Parent=gene-CCO34_RS15850;Dbxref=GenBank:WP_000582817.1;Name=WP_000582817.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=CCO34_RS15850;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582817.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 257744 258757 . - . ID=gene-CCO34_RS15855;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=CCO34_RS15855;old_locus_tag=CCO34_15850 NZ_NPMD01000006.1 Protein Homology CDS 257744 258757 . - 0 ID=cds-WP_000376857.1;Parent=gene-CCO34_RS15855;Dbxref=GenBank:WP_000376857.1;Name=WP_000376857.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=CCO34_RS15855;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_000376857.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 258775 259788 . - . ID=gene-CCO34_RS15860;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=CCO34_RS15860;old_locus_tag=CCO34_15855 NZ_NPMD01000006.1 Protein Homology CDS 258775 259788 . - 0 ID=cds-WP_000088485.1;Parent=gene-CCO34_RS15860;Dbxref=GenBank:WP_000088485.1;Name=WP_000088485.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=CCO34_RS15860;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088485.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 259794 260873 . - . ID=gene-CCO34_RS15865;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=CCO34_RS15865;old_locus_tag=CCO34_15860 NZ_NPMD01000006.1 Protein Homology CDS 259794 260873 . - 0 ID=cds-WP_000683972.1;Parent=gene-CCO34_RS15865;Dbxref=GenBank:WP_000683972.1;Name=WP_000683972.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=CCO34_RS15865;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_000683972.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 260887 261867 . - . ID=gene-CCO34_RS15870;Name=CCO34_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15870;old_locus_tag=CCO34_15865 NZ_NPMD01000006.1 Protein Homology CDS 260887 261867 . - 0 ID=cds-WP_001280097.1;Parent=gene-CCO34_RS15870;Dbxref=GenBank:WP_001280097.1;Name=WP_001280097.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280096.1;locus_tag=CCO34_RS15870;product=glycosyltransferase;protein_id=WP_001280097.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 261923 262720 . - . ID=gene-CCO34_RS15875;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=CCO34_RS15875;old_locus_tag=CCO34_15870 NZ_NPMD01000006.1 Protein Homology CDS 261923 262720 . - 0 ID=cds-WP_000229832.1;Parent=gene-CCO34_RS15875;Dbxref=GenBank:WP_000229832.1;Name=WP_000229832.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=CCO34_RS15875;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229832.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 262713 263837 . - . ID=gene-CCO34_RS15880;Name=CCO34_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15880;old_locus_tag=CCO34_15875 NZ_NPMD01000006.1 Protein Homology CDS 262713 263837 . - 0 ID=cds-WP_001261583.1;Parent=gene-CCO34_RS15880;Dbxref=GenBank:WP_001261583.1;Name=WP_001261583.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=CCO34_RS15880;product=glycosyltransferase family 4 protein;protein_id=WP_001261583.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 263834 264904 . - . ID=gene-CCO34_RS15885;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=CCO34_RS15885;old_locus_tag=CCO34_15880 NZ_NPMD01000006.1 Protein Homology CDS 263834 264904 . - 0 ID=cds-WP_001519059.1;Parent=gene-CCO34_RS15885;Dbxref=GenBank:WP_001519059.1;Name=WP_001519059.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=CCO34_RS15885;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001519059.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 265312 266589 . + . ID=gene-CCO34_RS15890;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=CCO34_RS15890;old_locus_tag=CCO34_15885 NZ_NPMD01000006.1 Protein Homology CDS 265312 266589 . + 0 ID=cds-WP_000891582.1;Parent=gene-CCO34_RS15890;Dbxref=GenBank:WP_000891582.1;Name=WP_000891582.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=CCO34_RS15890;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891582.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 266598 267077 . + . ID=gene-CCO34_RS15895;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CCO34_RS15895;old_locus_tag=CCO34_15890 NZ_NPMD01000006.1 Protein Homology CDS 266598 267077 . + 0 ID=cds-WP_001171884.1;Parent=gene-CCO34_RS15895;Dbxref=GenBank:WP_001171884.1;Name=WP_001171884.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=CCO34_RS15895;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171884.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 267105 267914 . - . ID=gene-CCO34_RS15900;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CCO34_RS15900;old_locus_tag=CCO34_15895 NZ_NPMD01000006.1 Protein Homology CDS 267105 267914 . - 0 ID=cds-WP_001114508.1;Parent=gene-CCO34_RS15900;Dbxref=GenBank:WP_001114508.1;Name=WP_001114508.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=CCO34_RS15900;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114508.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 268012 268179 . - . ID=gene-CCO34_RS15905;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CCO34_RS15905;old_locus_tag=CCO34_15900 NZ_NPMD01000006.1 Protein Homology CDS 268012 268179 . - 0 ID=cds-WP_001051798.1;Parent=gene-CCO34_RS15905;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=CCO34_RS15905;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 268200 268436 . - . ID=gene-CCO34_RS15910;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CCO34_RS15910;old_locus_tag=CCO34_15905 NZ_NPMD01000006.1 Protein Homology CDS 268200 268436 . - 0 ID=cds-WP_001519051.1;Parent=gene-CCO34_RS15910;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=CCO34_RS15910;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 268654 269319 . - . ID=gene-CCO34_RS15915;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CCO34_RS15915;old_locus_tag=CCO34_15910 NZ_NPMD01000006.1 Protein Homology CDS 268654 269319 . - 0 ID=cds-WP_000380129.1;Parent=gene-CCO34_RS15915;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=CCO34_RS15915;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 269495 270715 . + . ID=gene-CCO34_RS15920;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CCO34_RS15920;old_locus_tag=CCO34_15915 NZ_NPMD01000006.1 Protein Homology CDS 269495 270715 . + 0 ID=cds-WP_023243754.1;Parent=gene-CCO34_RS15920;Dbxref=GenBank:WP_023243754.1;Name=WP_023243754.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=CCO34_RS15920;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_023243754.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 270693 271151 . + . ID=gene-CCO34_RS15925;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=CCO34_RS15925;old_locus_tag=CCO34_15920 NZ_NPMD01000006.1 Protein Homology CDS 270693 271151 . + 0 ID=cds-WP_000976078.1;Parent=gene-CCO34_RS15925;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=CCO34_RS15925;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 271259 271855 . + . ID=gene-CCO34_RS15930;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=CCO34_RS15930;old_locus_tag=CCO34_15925 NZ_NPMD01000006.1 Protein Homology CDS 271259 271855 . + 0 ID=cds-WP_000818607.1;Parent=gene-CCO34_RS15930;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=CCO34_RS15930;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 271933 272574 . - . ID=gene-CCO34_RS15935;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CCO34_RS15935;old_locus_tag=CCO34_15930 NZ_NPMD01000006.1 Protein Homology CDS 271933 272574 . - 0 ID=cds-WP_001661397.1;Parent=gene-CCO34_RS15935;Dbxref=GenBank:WP_001661397.1;Name=WP_001661397.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=CCO34_RS15935;product=orotate phosphoribosyltransferase;protein_id=WP_001661397.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 272653 273369 . - . ID=gene-CCO34_RS15940;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=CCO34_RS15940;old_locus_tag=CCO34_15935 NZ_NPMD01000006.1 Protein Homology CDS 272653 273369 . - 0 ID=cds-WP_001247078.1;Parent=gene-CCO34_RS15940;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=CCO34_RS15940;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 273495 274358 . + . ID=gene-CCO34_RS15950;Name=CCO34_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15950;old_locus_tag=CCO34_15945 NZ_NPMD01000006.1 Protein Homology CDS 273495 274358 . + 0 ID=cds-WP_000621352.1;Parent=gene-CCO34_RS15950;Dbxref=GenBank:WP_000621352.1;Name=WP_000621352.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=CCO34_RS15950;product=YicC/YloC family endoribonuclease;protein_id=WP_000621352.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 274408 275310 . - . ID=gene-CCO34_RS15955;Name=CCO34_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15955;old_locus_tag=CCO34_15950 NZ_NPMD01000006.1 Protein Homology CDS 274408 275310 . - 0 ID=cds-WP_023243753.1;Parent=gene-CCO34_RS15955;Dbxref=GenBank:WP_023243753.1;Name=WP_023243753.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=CCO34_RS15955;product=LysR family transcriptional regulator;protein_id=WP_023243753.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 275384 276265 . + . ID=gene-CCO34_RS15960;Name=CCO34_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15960;old_locus_tag=CCO34_15955 NZ_NPMD01000006.1 Protein Homology CDS 275384 276265 . + 0 ID=cds-WP_017466073.1;Parent=gene-CCO34_RS15960;Dbxref=GenBank:WP_017466073.1;Name=WP_017466073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=CCO34_RS15960;product=HARLDQ motif MBL-fold protein;protein_id=WP_017466073.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 276516 277133 . + . ID=gene-CCO34_RS15965;Name=CCO34_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS15965;old_locus_tag=CCO34_15960 NZ_NPMD01000006.1 Protein Homology CDS 276516 277133 . + 0 ID=cds-WP_000924334.1;Parent=gene-CCO34_RS15965;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=CCO34_RS15965;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 277130 278815 . - . ID=gene-CCO34_RS15970;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=CCO34_RS15970;old_locus_tag=CCO34_15965 NZ_NPMD01000006.1 Protein Homology CDS 277130 278815 . - 0 ID=cds-WP_080180919.1;Parent=gene-CCO34_RS15970;Dbxref=GenBank:WP_080180919.1;Name=WP_080180919.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=CCO34_RS15970;product=NAD-dependent DNA ligase LigB;protein_id=WP_080180919.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 279072 279695 . + . ID=gene-CCO34_RS15975;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CCO34_RS15975;old_locus_tag=CCO34_15970 NZ_NPMD01000006.1 Protein Homology CDS 279072 279695 . + 0 ID=cds-WP_000046966.1;Parent=gene-CCO34_RS15975;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=CCO34_RS15975;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 279750 280025 . + . ID=gene-CCO34_RS15980;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CCO34_RS15980;old_locus_tag=CCO34_15975 NZ_NPMD01000006.1 Protein Homology CDS 279750 280025 . + 0 ID=cds-WP_000135058.1;Parent=gene-CCO34_RS15980;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=CCO34_RS15980;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 280044 282155 . + . ID=gene-CCO34_RS15985;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=CCO34_RS15985;old_locus_tag=CCO34_15980 NZ_NPMD01000006.1 Protein Homology CDS 280044 282155 . + 0 ID=cds-WP_000280481.1;Parent=gene-CCO34_RS15985;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=CCO34_RS15985;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 282160 282849 . + . ID=gene-CCO34_RS15990;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=CCO34_RS15990;old_locus_tag=CCO34_15985 NZ_NPMD01000006.1 Protein Homology CDS 282160 282849 . + 0 ID=cds-WP_001068436.1;Parent=gene-CCO34_RS15990;Dbxref=GenBank:WP_001068436.1;Name=WP_001068436.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=CCO34_RS15990;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068436.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 282855 284936 . + . ID=gene-CCO34_RS15995;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CCO34_RS15995;old_locus_tag=CCO34_15990 NZ_NPMD01000006.1 Protein Homology CDS 282855 284936 . + 0 ID=cds-WP_000016751.1;Parent=gene-CCO34_RS15995;Dbxref=GenBank:WP_000016751.1;Name=WP_000016751.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=CCO34_RS15995;product=ATP-dependent DNA helicase RecG;protein_id=WP_000016751.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 284972 286177 . - . ID=gene-CCO34_RS16000;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CCO34_RS16000;old_locus_tag=CCO34_15995 NZ_NPMD01000006.1 Protein Homology CDS 284972 286177 . - 0 ID=cds-WP_000462250.1;Parent=gene-CCO34_RS16000;Dbxref=GenBank:WP_000462250.1;Name=WP_000462250.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=CCO34_RS16000;product=sodium/glutamate symporter;protein_id=WP_000462250.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 286405 287796 . + . ID=gene-CCO34_RS16005;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=CCO34_RS16005;old_locus_tag=CCO34_16000 NZ_NPMD01000006.1 Protein Homology CDS 286405 287796 . + 0 ID=cds-WP_000115428.1;Parent=gene-CCO34_RS16005;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=CCO34_RS16005;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 287917 289626 . + . ID=gene-CCO34_RS16010;Name=CCO34_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16010;old_locus_tag=CCO34_16005 NZ_NPMD01000006.1 Protein Homology CDS 287917 289626 . + 0 ID=cds-WP_000766663.1;Parent=gene-CCO34_RS16010;Dbxref=GenBank:WP_000766663.1;Name=WP_000766663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=CCO34_RS16010;product=AsmA family protein;protein_id=WP_000766663.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 289729 292047 . - . ID=gene-CCO34_RS16015;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=CCO34_RS16015;old_locus_tag=CCO34_16010 NZ_NPMD01000006.1 Protein Homology CDS 289729 292047 . - 0 ID=cds-WP_000702998.1;Parent=gene-CCO34_RS16015;Dbxref=GenBank:WP_000702998.1;Name=WP_000702998.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=CCO34_RS16015;product=alpha-xylosidase;protein_id=WP_000702998.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 292059 293441 . - . ID=gene-CCO34_RS16020;Name=CCO34_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16020;old_locus_tag=CCO34_16015 NZ_NPMD01000006.1 Protein Homology CDS 292059 293441 . - 0 ID=cds-WP_000834259.1;Parent=gene-CCO34_RS16020;Dbxref=GenBank:WP_000834259.1;Name=WP_000834259.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=CCO34_RS16020;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834259.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 293729 293823 . + . ID=gene-CCO34_RS16025;Name=CCO34_RS16025;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS16025;old_locus_tag=CCO34_16020 NZ_NPMD01000006.1 tRNAscan-SE tRNA 293729 293823 . + . ID=rna-CCO34_RS16025;Parent=gene-CCO34_RS16025;anticodon=(pos:293763..293765);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS16025;product=tRNA-Sec NZ_NPMD01000006.1 tRNAscan-SE exon 293729 293823 . + . ID=exon-CCO34_RS16025-1;Parent=rna-CCO34_RS16025;anticodon=(pos:293763..293765);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS16025;product=tRNA-Sec NZ_NPMD01000006.1 RefSeq pseudogene 293859 294198 . - . ID=gene-CCO34_RS16030;Name=CCO34_RS16030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS16030;old_locus_tag=CCO34_16025;partial=true;pseudo=true;start_range=.,293859 NZ_NPMD01000006.1 Protein Homology CDS 293859 294198 . - 0 ID=cds-CCO34_RS16030;Parent=gene-CCO34_RS16030;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611920.1;locus_tag=CCO34_RS16030;partial=true;product=transposase;pseudo=true;start_range=.,293859;transl_table=11 NZ_NPMD01000006.1 RefSeq pseudogene 294579 294689 . + . ID=gene-CCO34_RS25835;Name=CCO34_RS25835;end_range=294689,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25835;partial=true;pseudo=true NZ_NPMD01000006.1 Protein Homology CDS 294579 294689 . + 0 ID=cds-CCO34_RS25835;Parent=gene-CCO34_RS25835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=294689,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=CCO34_RS25835;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 295446 296063 . + . ID=gene-CCO34_RS16035;Name=CCO34_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16035;old_locus_tag=CCO34_16030 NZ_NPMD01000006.1 Protein Homology CDS 295446 296063 . + 0 ID=cds-WP_000984806.1;Parent=gene-CCO34_RS16035;Dbxref=GenBank:WP_000984806.1;Name=WP_000984806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=CCO34_RS16035;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984806.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 296138 299005 . + . ID=gene-CCO34_RS16040;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=CCO34_RS16040;old_locus_tag=CCO34_16035 NZ_NPMD01000006.1 Protein Homology CDS 296138 299005 . + 0 ID=cds-WP_001143042.1;Parent=gene-CCO34_RS16040;Dbxref=GenBank:WP_001143042.1;Name=WP_001143042.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=CCO34_RS16040;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_001143042.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 299100 299564 . - . ID=gene-CCO34_RS16045;Name=CCO34_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16045;old_locus_tag=CCO34_16040 NZ_NPMD01000006.1 Protein Homology CDS 299100 299564 . - 0 ID=cds-WP_001521985.1;Parent=gene-CCO34_RS16045;Dbxref=GenBank:WP_001521985.1;Name=WP_001521985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=CCO34_RS16045;product=hypothetical protein;protein_id=WP_001521985.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 299575 300432 . - . ID=gene-CCO34_RS16050;Name=CCO34_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16050;old_locus_tag=CCO34_16045 NZ_NPMD01000006.1 Protein Homology CDS 299575 300432 . - 0 ID=cds-WP_001278065.1;Parent=gene-CCO34_RS16050;Dbxref=GenBank:WP_001278065.1;Name=WP_001278065.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=CCO34_RS16050;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001278065.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 301216 301896 . + . ID=gene-CCO34_RS16060;Name=CCO34_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16060;old_locus_tag=CCO34_16055 NZ_NPMD01000006.1 Protein Homology CDS 301216 301896 . + 0 ID=cds-WP_000106461.1;Parent=gene-CCO34_RS16060;Dbxref=GenBank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=CCO34_RS16060;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 302125 302604 . - . ID=gene-CCO34_RS16065;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=CCO34_RS16065;old_locus_tag=CCO34_16060 NZ_NPMD01000006.1 Protein Homology CDS 302125 302604 . - 0 ID=cds-WP_001065327.1;Parent=gene-CCO34_RS16065;Dbxref=GenBank:WP_001065327.1;Name=WP_001065327.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=CCO34_RS16065;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065327.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 302706 302792 . - . ID=gene-CCO34_RS26055;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=CCO34_RS26055 NZ_NPMD01000006.1 Protein Homology CDS 302706 302792 . - 0 ID=cds-WP_252515021.1;Parent=gene-CCO34_RS26055;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=CCO34_RS26055;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 302805 302897 . - . ID=gene-CCO34_RS16070;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=CCO34_RS16070;old_locus_tag=CCO34_16065 NZ_NPMD01000006.1 Protein Homology CDS 302805 302897 . - 0 ID=cds-WP_001082117.1;Parent=gene-CCO34_RS16070;Dbxref=GenBank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=CCO34_RS16070;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 302919 305645 . - . ID=gene-CCO34_RS16075;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO34_RS16075;old_locus_tag=CCO34_16070 NZ_NPMD01000006.1 Protein Homology CDS 302919 305645 . - 0 ID=cds-WP_000131273.1;Parent=gene-CCO34_RS16075;Dbxref=GenBank:WP_000131273.1;Name=WP_000131273.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=CCO34_RS16075;product=magnesium-translocating P-type ATPase;protein_id=WP_000131273.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 305864 306559 . - . ID=gene-CCO34_RS16080;Name=CCO34_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16080;old_locus_tag=CCO34_16075 NZ_NPMD01000006.1 Protein Homology CDS 305864 306559 . - 0 ID=cds-WP_000392693.1;Parent=gene-CCO34_RS16080;Dbxref=GenBank:WP_000392693.1;Name=WP_000392693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=CCO34_RS16080;product=MgtC family protein;protein_id=WP_000392693.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 307068 307970 . + . ID=gene-CCO34_RS16085;Name=CCO34_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16085;old_locus_tag=CCO34_16080 NZ_NPMD01000006.1 Protein Homology CDS 307068 307970 . + 0 ID=cds-WP_000535970.1;Parent=gene-CCO34_RS16085;Dbxref=GenBank:WP_000535970.1;Name=WP_000535970.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=CCO34_RS16085;product=EamA family transporter;protein_id=WP_000535970.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 308013 308954 . - . ID=gene-CCO34_RS16090;Name=CCO34_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16090;old_locus_tag=CCO34_16085 NZ_NPMD01000006.1 Protein Homology CDS 308013 308954 . - 0 ID=cds-WP_000749540.1;Parent=gene-CCO34_RS16090;Dbxref=GenBank:WP_000749540.1;Name=WP_000749540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=CCO34_RS16090;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749540.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 309190 309933 . - . ID=gene-CCO34_RS16095;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO34_RS16095;old_locus_tag=CCO34_16090 NZ_NPMD01000006.1 Protein Homology CDS 309190 309933 . - 0 ID=cds-WP_001186147.1;Parent=gene-CCO34_RS16095;Dbxref=GenBank:WP_001186147.1;Name=WP_001186147.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=CCO34_RS16095;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186147.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 309920 311029 . - . ID=gene-CCO34_RS16100;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=CCO34_RS16100;old_locus_tag=CCO34_16095 NZ_NPMD01000006.1 Protein Homology CDS 309920 311029 . - 0 ID=cds-WP_000188473.1;Parent=gene-CCO34_RS16100;Dbxref=GenBank:WP_000188473.1;Name=WP_000188473.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=CCO34_RS16100;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_000188473.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 311033 311893 . - . ID=gene-CCO34_RS16105;Name=CCO34_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16105;old_locus_tag=CCO34_16100 NZ_NPMD01000006.1 Protein Homology CDS 311033 311893 . - 0 ID=cds-WP_001519740.1;Parent=gene-CCO34_RS16105;Dbxref=GenBank:WP_001519740.1;Name=WP_001519740.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=CCO34_RS16105;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001519740.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 311890 312639 . - . ID=gene-CCO34_RS16110;Name=CCO34_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16110;old_locus_tag=CCO34_16105 NZ_NPMD01000006.1 Protein Homology CDS 311890 312639 . - 0 ID=cds-WP_000380259.1;Parent=gene-CCO34_RS16110;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=CCO34_RS16110;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 312785 313270 . - . ID=gene-CCO34_RS16115;Name=CCO34_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16115;old_locus_tag=CCO34_16110 NZ_NPMD01000006.1 Protein Homology CDS 312785 313270 . - 0 ID=cds-WP_001284295.1;Parent=gene-CCO34_RS16115;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=CCO34_RS16115;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 313281 313706 . - . ID=gene-CCO34_RS16120;Name=CCO34_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16120;old_locus_tag=CCO34_16115 NZ_NPMD01000006.1 Protein Homology CDS 313281 313706 . - 0 ID=cds-WP_000214103.1;Parent=gene-CCO34_RS16120;Dbxref=GenBank:WP_000214103.1;Name=WP_000214103.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=CCO34_RS16120;product=PTS sugar transporter subunit IIA;protein_id=WP_000214103.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 313925 316723 . - . ID=gene-CCO34_RS16130;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=CCO34_RS16130;old_locus_tag=CCO34_16125 NZ_NPMD01000006.1 Protein Homology CDS 313925 316723 . - 0 ID=cds-WP_001252672.1;Parent=gene-CCO34_RS16130;Dbxref=GenBank:WP_001252672.1;Name=WP_001252672.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=CCO34_RS16130;product=transcriptional regulator DagR;protein_id=WP_001252672.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 316920 317213 . + . ID=gene-CCO34_RS16135;Name=CCO34_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16135;old_locus_tag=CCO34_16130 NZ_NPMD01000006.1 Protein Homology CDS 316920 317213 . + 0 ID=cds-WP_000824212.1;Parent=gene-CCO34_RS16135;Dbxref=GenBank:WP_000824212.1;Name=WP_000824212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=CCO34_RS16135;product=YicS family protein;protein_id=WP_000824212.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 317319 318701 . + . ID=gene-CCO34_RS16140;Name=CCO34_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16140;old_locus_tag=CCO34_16135 NZ_NPMD01000006.1 Protein Homology CDS 317319 318701 . + 0 ID=cds-WP_001270471.1;Parent=gene-CCO34_RS16140;Dbxref=GenBank:WP_001270471.1;Name=WP_001270471.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=CCO34_RS16140;product=glycoside hydrolase family 1 protein;protein_id=WP_001270471.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 318761 319954 . - . ID=gene-CCO34_RS16145;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=CCO34_RS16145;old_locus_tag=CCO34_16140 NZ_NPMD01000006.1 Protein Homology CDS 318761 319954 . - 0 ID=cds-WP_001004798.1;Parent=gene-CCO34_RS16145;Dbxref=GenBank:WP_001004798.1;Name=WP_001004798.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=CCO34_RS16145;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004798.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 320170 320529 . + . ID=gene-CCO34_RS16150;Name=CCO34_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16150;old_locus_tag=CCO34_16145 NZ_NPMD01000006.1 Protein Homology CDS 320170 320529 . + 0 ID=cds-WP_001217951.1;Parent=gene-CCO34_RS16150;Dbxref=GenBank:WP_001217951.1;Name=WP_001217951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=CCO34_RS16150;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001217951.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 320513 320836 . + . ID=gene-CCO34_RS16155;Name=CCO34_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16155;old_locus_tag=CCO34_16150 NZ_NPMD01000006.1 Protein Homology CDS 320513 320836 . + 0 ID=cds-WP_001274842.1;Parent=gene-CCO34_RS16155;Dbxref=GenBank:WP_001274842.1;Name=WP_001274842.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=CCO34_RS16155;product=helix-turn-helix domain-containing protein;protein_id=WP_001274842.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 320927 321196 . - . ID=gene-CCO34_RS16160;Name=CCO34_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16160;old_locus_tag=CCO34_16155 NZ_NPMD01000006.1 Protein Homology CDS 320927 321196 . - 0 ID=cds-WP_000621026.1;Parent=gene-CCO34_RS16160;Dbxref=GenBank:WP_000621026.1;Name=WP_000621026.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=CCO34_RS16160;product=HPr family phosphocarrier protein;protein_id=WP_000621026.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 321206 322066 . - . ID=gene-CCO34_RS16165;Name=CCO34_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16165;old_locus_tag=CCO34_16160 NZ_NPMD01000006.1 Protein Homology CDS 321206 322066 . - 0 ID=cds-WP_001131799.1;Parent=gene-CCO34_RS16165;Dbxref=GenBank:WP_001131799.1;Name=WP_001131799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=CCO34_RS16165;product=class II aldolase;protein_id=WP_001131799.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 322129 323613 . - . ID=gene-CCO34_RS16170;Name=CCO34_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16170;old_locus_tag=CCO34_16165 NZ_NPMD01000006.1 Protein Homology CDS 322129 323613 . - 0 ID=cds-WP_001113557.1;Parent=gene-CCO34_RS16170;Dbxref=GenBank:WP_001113557.1;Name=WP_001113557.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=CCO34_RS16170;product=FGGY-family carbohydrate kinase;protein_id=WP_001113557.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 323606 324964 . - . ID=gene-CCO34_RS16175;Name=CCO34_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16175;old_locus_tag=CCO34_16170 NZ_NPMD01000006.1 Protein Homology CDS 323606 324964 . - 0 ID=cds-WP_000997824.1;Parent=gene-CCO34_RS16175;Dbxref=GenBank:WP_000997824.1;Name=WP_000997824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=CCO34_RS16175;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997824.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 325040 325327 . - . ID=gene-CCO34_RS16180;Name=CCO34_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16180;old_locus_tag=CCO34_16175 NZ_NPMD01000006.1 Protein Homology CDS 325040 325327 . - 0 ID=cds-WP_000041396.1;Parent=gene-CCO34_RS16180;Dbxref=GenBank:WP_000041396.1;Name=WP_000041396.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=CCO34_RS16180;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 325324 325797 . - . ID=gene-CCO34_RS16185;Name=CCO34_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16185;old_locus_tag=CCO34_16180 NZ_NPMD01000006.1 Protein Homology CDS 325324 325797 . - 0 ID=cds-WP_001152237.1;Parent=gene-CCO34_RS16185;Dbxref=GenBank:WP_001152237.1;Name=WP_001152237.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=CCO34_RS16185;product=PTS sugar transporter subunit IIA;protein_id=WP_001152237.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 325815 326558 . - . ID=gene-CCO34_RS16190;Name=CCO34_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16190;old_locus_tag=CCO34_16185 NZ_NPMD01000006.1 Protein Homology CDS 325815 326558 . - 0 ID=cds-WP_000854956.1;Parent=gene-CCO34_RS16190;Dbxref=GenBank:WP_000854956.1;Name=WP_000854956.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=CCO34_RS16190;product=GntR family transcriptional regulator;protein_id=WP_000854956.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 326911 327363 . - . ID=gene-CCO34_RS16195;Name=CCO34_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16195;old_locus_tag=CCO34_16190 NZ_NPMD01000006.1 Protein Homology CDS 326911 327363 . - 0 ID=cds-WP_001519640.1;Parent=gene-CCO34_RS16195;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=CCO34_RS16195;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 327556 328947 . - . ID=gene-CCO34_RS16200;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CCO34_RS16200;old_locus_tag=CCO34_16195 NZ_NPMD01000006.1 Protein Homology CDS 327556 328947 . - 0 ID=cds-WP_000879180.1;Parent=gene-CCO34_RS16200;Dbxref=GenBank:WP_000879180.1;Name=WP_000879180.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=CCO34_RS16200;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879180.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 329090 330418 . - . ID=gene-CCO34_RS16205;Name=CCO34_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16205;old_locus_tag=CCO34_16200 NZ_NPMD01000006.1 Protein Homology CDS 329090 330418 . - 0 ID=cds-WP_000948170.1;Parent=gene-CCO34_RS16205;Dbxref=GenBank:WP_000948170.1;Name=WP_000948170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=CCO34_RS16205;product=MFS transporter;protein_id=WP_000948170.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 330428 331930 . - . ID=gene-CCO34_RS16210;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=CCO34_RS16210;old_locus_tag=CCO34_16205 NZ_NPMD01000006.1 Protein Homology CDS 330428 331930 . - 0 ID=cds-WP_001091264.1;Parent=gene-CCO34_RS16210;Dbxref=GenBank:WP_001091264.1;Name=WP_001091264.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=CCO34_RS16210;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001091264.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 331930 332520 . - . ID=gene-CCO34_RS16215;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=CCO34_RS16215;old_locus_tag=CCO34_16210 NZ_NPMD01000006.1 Protein Homology CDS 331930 332520 . - 0 ID=cds-WP_000633672.1;Parent=gene-CCO34_RS16215;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=CCO34_RS16215;product=transcriptional regulator UhpA;protein_id=WP_000633672.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 332595 333608 . - . ID=gene-CCO34_RS16220;Name=CCO34_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16220;old_locus_tag=CCO34_16215 NZ_NPMD01000006.1 Protein Homology CDS 332595 333608 . - 0 ID=cds-WP_000213201.1;Parent=gene-CCO34_RS16220;Dbxref=GenBank:WP_000213201.1;Name=WP_000213201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=CCO34_RS16220;product=aldose 1-epimerase family protein;protein_id=WP_000213201.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 333620 334936 . - . ID=gene-CCO34_RS16225;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO34_RS16225;old_locus_tag=CCO34_16220 NZ_NPMD01000006.1 Protein Homology CDS 333620 334936 . - 0 ID=cds-WP_000998358.1;Parent=gene-CCO34_RS16225;Dbxref=GenBank:WP_000998358.1;Name=WP_000998358.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=CCO34_RS16225;product=L-fucose:H+ symporter permease;protein_id=WP_000998358.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 334967 335887 . - . ID=gene-CCO34_RS16230;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO34_RS16230;old_locus_tag=CCO34_16225 NZ_NPMD01000006.1 Protein Homology CDS 334967 335887 . - 0 ID=cds-WP_000350272.1;Parent=gene-CCO34_RS16230;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=CCO34_RS16230;product=ribokinase;protein_id=WP_000350272.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 336212 336997 . + . ID=gene-CCO34_RS16235;Name=CCO34_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16235;old_locus_tag=CCO34_16230 NZ_NPMD01000006.1 Protein Homology CDS 336212 336997 . + 0 ID=cds-WP_000448638.1;Parent=gene-CCO34_RS16235;Dbxref=GenBank:WP_000448638.1;Name=WP_000448638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=CCO34_RS16235;product=DeoR family transcriptional regulator;protein_id=WP_000448638.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 336999 337289 . - . ID=gene-CCO34_RS16240;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO34_RS16240;old_locus_tag=CCO34_16235 NZ_NPMD01000006.1 Protein Homology CDS 336999 337289 . - 0 ID=cds-WP_001171826.1;Parent=gene-CCO34_RS16240;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=CCO34_RS16240;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 337293 338981 . - . ID=gene-CCO34_RS16245;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CCO34_RS16245;old_locus_tag=CCO34_16240 NZ_NPMD01000006.1 Protein Homology CDS 337293 338981 . - 0 ID=cds-WP_000168439.1;Parent=gene-CCO34_RS16245;Dbxref=GenBank:WP_000168439.1;Name=WP_000168439.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=CCO34_RS16245;product=acetolactate synthase large subunit;protein_id=WP_000168439.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 339088 339186 . - . ID=gene-CCO34_RS16250;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=CCO34_RS16250;old_locus_tag=CCO34_16245 NZ_NPMD01000006.1 Protein Homology CDS 339088 339186 . - 0 ID=cds-WP_001541152.1;Parent=gene-CCO34_RS16250;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=CCO34_RS16250;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11 NZ_NPMD01000006.1 RefSeq pseudogene 339709 339823 . + . ID=gene-CCO34_RS25355;Name=CCO34_RS25355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25355;pseudo=true NZ_NPMD01000006.1 Protein Homology CDS 339709 339823 . + 0 ID=cds-CCO34_RS25355;Parent=gene-CCO34_RS25355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=CCO34_RS25355;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 339820 339909 . + . ID=gene-CCO34_RS16255;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=CCO34_RS16255;old_locus_tag=CCO34_16250 NZ_NPMD01000006.1 Protein Homology CDS 339820 339909 . + 0 ID=cds-WP_000117642.1;Parent=gene-CCO34_RS16255;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=CCO34_RS16255;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 340002 340862 . + . ID=gene-CCO34_RS16260;Name=CCO34_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16260;old_locus_tag=CCO34_16255 NZ_NPMD01000006.1 Protein Homology CDS 340002 340862 . + 0 ID=cds-WP_001531658.1;Parent=gene-CCO34_RS16260;Dbxref=GenBank:WP_001531658.1;Name=WP_001531658.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=CCO34_RS16260;product=DMT family transporter;protein_id=WP_001531658.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 341065 342249 . + . ID=gene-CCO34_RS16265;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=CCO34_RS16265;old_locus_tag=CCO34_16260 NZ_NPMD01000006.1 Protein Homology CDS 341065 342249 . + 0 ID=cds-WP_000828737.1;Parent=gene-CCO34_RS16265;Dbxref=GenBank:WP_000828737.1;Name=WP_000828737.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=CCO34_RS16265;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828737.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 342176 343261 . - . ID=gene-CCO34_RS16270;Name=CCO34_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16270;old_locus_tag=CCO34_16265 NZ_NPMD01000006.1 Protein Homology CDS 342176 343261 . - 0 ID=cds-WP_094965477.1;Parent=gene-CCO34_RS16270;Dbxref=GenBank:WP_094965477.1;Name=WP_094965477.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=CCO34_RS16270;product=cellulase family glycosylhydrolase;protein_id=WP_094965477.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 343325 344248 . - . ID=gene-CCO34_RS16275;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=CCO34_RS16275;old_locus_tag=CCO34_16270 NZ_NPMD01000006.1 Protein Homology CDS 343325 344248 . - 0 ID=cds-WP_001522218.1;Parent=gene-CCO34_RS16275;Dbxref=GenBank:WP_001522218.1;Name=WP_001522218.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=CCO34_RS16275;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001522218.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 344474 345811 . + . ID=gene-CCO34_RS16280;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=CCO34_RS16280;old_locus_tag=CCO34_16275 NZ_NPMD01000006.1 Protein Homology CDS 344474 345811 . + 0 ID=cds-WP_000543317.1;Parent=gene-CCO34_RS16280;Dbxref=GenBank:WP_000543317.1;Name=WP_000543317.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=CCO34_RS16280;product=D-serine transporter DsdX;protein_id=WP_000543317.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 345829 347151 . + . ID=gene-CCO34_RS16285;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=CCO34_RS16285;old_locus_tag=CCO34_16280 NZ_NPMD01000006.1 Protein Homology CDS 345829 347151 . + 0 ID=cds-WP_000427993.1;Parent=gene-CCO34_RS16285;Dbxref=GenBank:WP_000427993.1;Name=WP_000427993.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=CCO34_RS16285;product=D-serine ammonia-lyase;protein_id=WP_000427993.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 347233 347763 . - . ID=gene-CCO34_RS16290;Name=CCO34_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16290;old_locus_tag=CCO34_16285 NZ_NPMD01000006.1 Protein Homology CDS 347233 347763 . - 0 ID=cds-WP_000147832.1;Parent=gene-CCO34_RS16290;Dbxref=GenBank:WP_000147832.1;Name=WP_000147832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=CCO34_RS16290;product=radical SAM protein;protein_id=WP_000147832.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 347760 348122 . - . ID=gene-CCO34_RS16295;Name=CCO34_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16295;old_locus_tag=CCO34_16290 NZ_NPMD01000006.1 Protein Homology CDS 347760 348122 . - 0 ID=cds-WP_001113454.1;Parent=gene-CCO34_RS16295;Dbxref=GenBank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=CCO34_RS16295;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 348112 348459 . - . ID=gene-CCO34_RS16300;Name=CCO34_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16300;old_locus_tag=CCO34_16295 NZ_NPMD01000006.1 Protein Homology CDS 348112 348459 . - 0 ID=cds-WP_000703964.1;Parent=gene-CCO34_RS16300;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=CCO34_RS16300;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 348595 348741 . + . ID=gene-CCO34_RS25565;Name=CCO34_RS25565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25565 NZ_NPMD01000006.1 Protein Homology CDS 348595 348741 . + 0 ID=cds-WP_000068501.1;Parent=gene-CCO34_RS25565;Dbxref=GenBank:WP_000068501.1;Name=WP_000068501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068508.1;locus_tag=CCO34_RS25565;product=hypothetical protein;protein_id=WP_000068501.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 348902 350563 . - . ID=gene-CCO34_RS16305;Name=CCO34_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16305;old_locus_tag=CCO34_16300 NZ_NPMD01000006.1 Protein Homology CDS 348902 350563 . - 0 ID=cds-WP_001279793.1;Parent=gene-CCO34_RS16305;Dbxref=GenBank:WP_001279793.1;Name=WP_001279793.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=CCO34_RS16305;product=putative transporter;protein_id=WP_001279793.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 350753 351181 . - . ID=gene-CCO34_RS16310;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=CCO34_RS16310;old_locus_tag=CCO34_16305 NZ_NPMD01000006.1 Protein Homology CDS 350753 351181 . - 0 ID=cds-WP_001246919.1;Parent=gene-CCO34_RS16310;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=CCO34_RS16310;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 351291 351704 . - . ID=gene-CCO34_RS16315;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=CCO34_RS16315;old_locus_tag=CCO34_16310 NZ_NPMD01000006.1 Protein Homology CDS 351291 351704 . - 0 ID=cds-WP_001532742.1;Parent=gene-CCO34_RS16315;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=CCO34_RS16315;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11 NZ_NPMD01000006.1 cmsearch sequence_feature 351698 351771 . - . ID=id-NZ_NPMD01000006.1:351698..351771;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMD01000006.1 RefSeq gene 352014 352346 . + . ID=gene-CCO34_RS16320;Name=CCO34_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16320;old_locus_tag=CCO34_16315 NZ_NPMD01000006.1 Protein Homology CDS 352014 352346 . + 0 ID=cds-WP_001581211.1;Parent=gene-CCO34_RS16320;Dbxref=GenBank:WP_001581211.1;Name=WP_001581211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=CCO34_RS16320;product=YceK/YidQ family lipoprotein;protein_id=WP_001581211.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 352348 353574 . - . ID=gene-CCO34_RS16325;Name=CCO34_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16325;old_locus_tag=CCO34_16320 NZ_NPMD01000006.1 Protein Homology CDS 352348 353574 . - 0 ID=cds-WP_000809955.1;Parent=gene-CCO34_RS16325;Dbxref=GenBank:WP_000809955.1;Name=WP_000809955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=CCO34_RS16325;product=DUF3748 domain-containing protein;protein_id=WP_000809955.1;transl_table=11 NZ_NPMD01000006.1 RefSeq gene 353696 354219 . - . ID=gene-CCO34_RS16330;Name=CCO34_RS16330;end_range=354219,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16330;old_locus_tag=CCO34_16325;partial=true NZ_NPMD01000006.1 Protein Homology CDS 353696 354219 . - 2 ID=cds-WP_140428477.1;Parent=gene-CCO34_RS16330;Dbxref=GenBank:WP_140428477.1;Name=WP_140428477.1;Ontology_term=GO:0005515;end_range=354219,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=CCO34_RS16330;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_140428477.1;transl_table=11 ##sequence-region NZ_NPMD01000007.1 1 288977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000007.1 RefSeq region 1 288977 . + . ID=NZ_NPMD01000007.1:1..288977;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000007.1 RefSeq gene 1 1208 . + . ID=gene-CCO34_RS16335;Name=CCO34_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16335;old_locus_tag=CCO34_16330;partial=true;start_range=.,1 NZ_NPMD01000007.1 Protein Homology CDS 1 1208 . + 2 ID=cds-WP_094965478.1;Parent=gene-CCO34_RS16335;Dbxref=GenBank:WP_094965478.1;Name=WP_094965478.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO34_RS16335;partial=true;product=pyruvate carboxylase subunit B;protein_id=WP_094965478.1;start_range=.,1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 1224 2525 . + . ID=gene-CCO34_RS16340;Name=CCO34_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16340;old_locus_tag=CCO34_16335 NZ_NPMD01000007.1 Protein Homology CDS 1224 2525 . + 0 ID=cds-WP_000444826.1;Parent=gene-CCO34_RS16340;Dbxref=GenBank:WP_000444826.1;Name=WP_000444826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO34_RS16340;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444826.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 2660 4279 . + . ID=gene-CCO34_RS16345;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=CCO34_RS16345;old_locus_tag=CCO34_16340 NZ_NPMD01000007.1 Protein Homology CDS 2660 4279 . + 0 ID=cds-WP_023228935.1;Parent=gene-CCO34_RS16345;Dbxref=GenBank:WP_023228935.1;Name=WP_023228935.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=CCO34_RS16345;product=citrate sensor histidine kinase CitA;protein_id=WP_023228935.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 4281 4988 . + . ID=gene-CCO34_RS16350;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=CCO34_RS16350;old_locus_tag=CCO34_16345 NZ_NPMD01000007.1 Protein Homology CDS 4281 4988 . + 0 ID=cds-WP_023228936.1;Parent=gene-CCO34_RS16350;Dbxref=GenBank:WP_023228936.1;Name=WP_023228936.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000377417.1;locus_tag=CCO34_RS16350;product=citrate response regulator transcription factor CitB;protein_id=WP_023228936.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 4989 5909 . - . ID=gene-CCO34_RS16355;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CCO34_RS16355;old_locus_tag=CCO34_16350 NZ_NPMD01000007.1 Protein Homology CDS 4989 5909 . - 0 ID=cds-WP_000127282.1;Parent=gene-CCO34_RS16355;Dbxref=GenBank:WP_000127282.1;Name=WP_000127282.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=CCO34_RS16355;product=ribonucleoside hydrolase RihC;protein_id=WP_000127282.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 5925 7127 . - . ID=gene-CCO34_RS16360;Name=CCO34_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16360;old_locus_tag=CCO34_16355 NZ_NPMD01000007.1 Protein Homology CDS 5925 7127 . - 0 ID=cds-WP_000516329.1;Parent=gene-CCO34_RS16360;Dbxref=GenBank:WP_000516329.1;Name=WP_000516329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=CCO34_RS16360;product=XAC2610-related protein;protein_id=WP_000516329.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 7327 8277 . - . ID=gene-CCO34_RS16365;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=CCO34_RS16365;old_locus_tag=CCO34_16360 NZ_NPMD01000007.1 Protein Homology CDS 7327 8277 . - 0 ID=cds-WP_001166422.1;Parent=gene-CCO34_RS16365;Dbxref=GenBank:WP_001166422.1;Name=WP_001166422.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=CCO34_RS16365;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166422.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 8280 8729 . - . ID=gene-CCO34_RS16370;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=CCO34_RS16370;old_locus_tag=CCO34_16365 NZ_NPMD01000007.1 Protein Homology CDS 8280 8729 . - 0 ID=cds-WP_000047269.1;Parent=gene-CCO34_RS16370;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=CCO34_RS16370;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 8884 9384 . - . ID=gene-CCO34_RS16375;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CCO34_RS16375;old_locus_tag=CCO34_16370 NZ_NPMD01000007.1 Protein Homology CDS 8884 9384 . - 0 ID=cds-WP_000042740.1;Parent=gene-CCO34_RS16375;Dbxref=GenBank:WP_000042740.1;Name=WP_000042740.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=CCO34_RS16375;product=signal peptidase II;protein_id=WP_000042740.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 9384 12218 . - . ID=gene-CCO34_RS16380;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CCO34_RS16380;old_locus_tag=CCO34_16375 NZ_NPMD01000007.1 Protein Homology CDS 9384 12218 . - 0 ID=cds-WP_023228937.1;Parent=gene-CCO34_RS16380;Dbxref=GenBank:WP_023228937.1;Name=WP_023228937.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=CCO34_RS16380;product=isoleucine--tRNA ligase;protein_id=WP_023228937.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 12263 13201 . - . ID=gene-CCO34_RS16385;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=CCO34_RS16385;old_locus_tag=CCO34_16380 NZ_NPMD01000007.1 Protein Homology CDS 12263 13201 . - 0 ID=cds-WP_000767311.1;Parent=gene-CCO34_RS16385;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=CCO34_RS16385;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 13209 13424 . - . ID=gene-CCO34_RS16390;Name=CCO34_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16390;old_locus_tag=CCO34_16385 NZ_NPMD01000007.1 Protein Homology CDS 13209 13424 . - 0 ID=cds-WP_001726890.1;Parent=gene-CCO34_RS16390;Dbxref=GenBank:WP_001726890.1;Name=WP_001726890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=CCO34_RS16390;product=DUF2575 family protein;protein_id=WP_001726890.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 13530 13793 . + . ID=gene-CCO34_RS16395;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CCO34_RS16395;old_locus_tag=CCO34_16390 NZ_NPMD01000007.1 Protein Homology CDS 13530 13793 . + 0 ID=cds-WP_001518655.1;Parent=gene-CCO34_RS16395;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=CCO34_RS16395;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 14249 15622 . + . ID=gene-CCO34_RS16400;Name=CCO34_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16400;old_locus_tag=CCO34_16395 NZ_NPMD01000007.1 Protein Homology CDS 14249 15622 . + 0 ID=cds-WP_000099988.1;Parent=gene-CCO34_RS16400;Dbxref=GenBank:WP_000099988.1;Name=WP_000099988.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=CCO34_RS16400;product=MFS transporter;protein_id=WP_000099988.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 15662 17701 . + . ID=gene-CCO34_RS16405;Name=CCO34_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16405;old_locus_tag=CCO34_16400 NZ_NPMD01000007.1 Protein Homology CDS 15662 17701 . + 0 ID=cds-WP_001116457.1;Parent=gene-CCO34_RS16405;Dbxref=GenBank:WP_001116457.1;Name=WP_001116457.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=CCO34_RS16405;product=glycoside hydrolase family 31 protein;protein_id=WP_001116457.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 17756 18655 . - . ID=gene-CCO34_RS16410;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=CCO34_RS16410;old_locus_tag=CCO34_16405 NZ_NPMD01000007.1 Protein Homology CDS 17756 18655 . - 0 ID=cds-WP_000062872.1;Parent=gene-CCO34_RS16410;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=CCO34_RS16410;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 18717 19883 . - . ID=gene-CCO34_RS16415;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=CCO34_RS16415;old_locus_tag=CCO34_16410 NZ_NPMD01000007.1 Protein Homology CDS 18717 19883 . - 0 ID=cds-WP_000681340.1;Parent=gene-CCO34_RS16415;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=CCO34_RS16415;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 20046 21761 . - . ID=gene-CCO34_RS16420;Name=CCO34_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16420;old_locus_tag=CCO34_16415 NZ_NPMD01000007.1 Protein Homology CDS 20046 21761 . - 0 ID=cds-WP_001094799.1;Parent=gene-CCO34_RS16420;Dbxref=GenBank:WP_001094799.1;Name=WP_001094799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=CCO34_RS16420;product=aryl-sulfate sulfotransferase;protein_id=WP_001094799.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 21879 23141 . - . ID=gene-CCO34_RS16425;Name=CCO34_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16425;old_locus_tag=CCO34_16420 NZ_NPMD01000007.1 Protein Homology CDS 21879 23141 . - 0 ID=cds-WP_001055830.1;Parent=gene-CCO34_RS16425;Dbxref=GenBank:WP_001055830.1;Name=WP_001055830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055825.1;locus_tag=CCO34_RS16425;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_001055830.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 23160 24350 . - . ID=gene-CCO34_RS16430;Name=CCO34_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16430;old_locus_tag=CCO34_16425 NZ_NPMD01000007.1 Protein Homology CDS 23160 24350 . - 0 ID=cds-WP_000971148.1;Parent=gene-CCO34_RS16430;Dbxref=GenBank:WP_000971148.1;Name=WP_000971148.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=CCO34_RS16430;product=anaerobic sulfatase maturase;protein_id=WP_000971148.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 24449 25942 . - . ID=gene-CCO34_RS16435;Name=CCO34_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16435;old_locus_tag=CCO34_16430 NZ_NPMD01000007.1 Protein Homology CDS 24449 25942 . - 0 ID=cds-WP_000831880.1;Parent=gene-CCO34_RS16435;Dbxref=GenBank:WP_000831880.1;Name=WP_000831880.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=CCO34_RS16435;product=sulfatase family protein;protein_id=WP_000831880.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 26539 27300 . + . ID=gene-CCO34_RS16440;Name=CCO34_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16440;old_locus_tag=CCO34_16435 NZ_NPMD01000007.1 Protein Homology CDS 26539 27300 . + 0 ID=cds-WP_000791534.1;Parent=gene-CCO34_RS16440;Dbxref=GenBank:WP_000791534.1;Name=WP_000791534.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=CCO34_RS16440;product=outer membrane protein OmpK;protein_id=WP_000791534.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 27399 28970 . + . ID=gene-CCO34_RS16445;Name=CCO34_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16445;old_locus_tag=CCO34_16440 NZ_NPMD01000007.1 Protein Homology CDS 27399 28970 . + 0 ID=cds-WP_000262866.1;Parent=gene-CCO34_RS16445;Dbxref=GenBank:WP_000262866.1;Name=WP_000262866.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=CCO34_RS16445;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000262866.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 29016 30734 . - . ID=gene-CCO34_RS16450;Name=CCO34_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16450;old_locus_tag=CCO34_16445 NZ_NPMD01000007.1 Protein Homology CDS 29016 30734 . - 0 ID=cds-WP_001036513.1;Parent=gene-CCO34_RS16450;Dbxref=GenBank:WP_001036513.1;Name=WP_001036513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=CCO34_RS16450;product=aryl-sulfate sulfotransferase;protein_id=WP_001036513.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 31257 31697 . + . ID=gene-CCO34_RS16455;Name=CCO34_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16455;old_locus_tag=CCO34_16450 NZ_NPMD01000007.1 Protein Homology CDS 31257 31697 . + 0 ID=cds-WP_000158347.1;Parent=gene-CCO34_RS16455;Dbxref=GenBank:WP_000158347.1;Name=WP_000158347.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=CCO34_RS16455;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000158347.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 31705 32709 . - . ID=gene-CCO34_RS16460;Name=CCO34_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16460;old_locus_tag=CCO34_16455 NZ_NPMD01000007.1 Protein Homology CDS 31705 32709 . - 0 ID=cds-WP_001247399.1;Parent=gene-CCO34_RS16460;Dbxref=GenBank:WP_001247399.1;Name=WP_001247399.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247398.1;locus_tag=CCO34_RS16460;product=LysR family transcriptional regulator;protein_id=WP_001247399.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 33079 33528 . + . ID=gene-CCO34_RS16465;Name=CCO34_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16465;old_locus_tag=CCO34_16460 NZ_NPMD01000007.1 Protein Homology CDS 33079 33528 . + 0 ID=cds-WP_001250362.1;Parent=gene-CCO34_RS16465;Dbxref=GenBank:WP_001250362.1;Name=WP_001250362.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=CCO34_RS16465;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001250362.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 33628 33915 . - . ID=gene-CCO34_RS16470;Name=CCO34_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16470;old_locus_tag=CCO34_16465 NZ_NPMD01000007.1 Protein Homology CDS 33628 33915 . - 0 ID=cds-WP_000839833.1;Parent=gene-CCO34_RS16470;Dbxref=GenBank:WP_000839833.1;Name=WP_000839833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=CCO34_RS16470;product=hypothetical protein;protein_id=WP_000839833.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 33954 34799 . - . ID=gene-CCO34_RS16475;Name=CCO34_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16475;old_locus_tag=CCO34_16470 NZ_NPMD01000007.1 Protein Homology CDS 33954 34799 . - 0 ID=cds-WP_000291392.1;Parent=gene-CCO34_RS16475;Dbxref=GenBank:WP_000291392.1;Name=WP_000291392.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=CCO34_RS16475;product=DsbA family protein;protein_id=WP_000291392.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 34863 35594 . - . ID=gene-CCO34_RS16480;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=CCO34_RS16480;old_locus_tag=CCO34_16475 NZ_NPMD01000007.1 Protein Homology CDS 34863 35594 . - 0 ID=cds-WP_001135043.1;Parent=gene-CCO34_RS16480;Dbxref=GenBank:WP_001135043.1;Name=WP_001135043.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=CCO34_RS16480;product=fimbrial chaperone BcfG;protein_id=WP_001135043.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 35560 36078 . - . ID=gene-CCO34_RS16485;Name=CCO34_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16485;old_locus_tag=CCO34_16480 NZ_NPMD01000007.1 Protein Homology CDS 35560 36078 . - 0 ID=cds-WP_001243232.1;Parent=gene-CCO34_RS16485;Dbxref=GenBank:WP_001243232.1;Name=WP_001243232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=CCO34_RS16485;product=fimbrial protein BcfF;protein_id=WP_001243232.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 36094 36639 . - . ID=gene-CCO34_RS16490;Name=CCO34_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16490;old_locus_tag=CCO34_16485 NZ_NPMD01000007.1 Protein Homology CDS 36094 36639 . - 0 ID=cds-WP_001082038.1;Parent=gene-CCO34_RS16490;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=CCO34_RS16490;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 36640 37647 . - . ID=gene-CCO34_RS16495;Name=CCO34_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16495;old_locus_tag=CCO34_16490 NZ_NPMD01000007.1 Protein Homology CDS 36640 37647 . - 0 ID=cds-WP_000701247.1;Parent=gene-CCO34_RS16495;Dbxref=GenBank:WP_000701247.1;Name=WP_000701247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=CCO34_RS16495;product=fimbrial protein BcfD;protein_id=WP_000701247.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 37648 40269 . - . ID=gene-CCO34_RS16500;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=CCO34_RS16500;old_locus_tag=CCO34_16495 NZ_NPMD01000007.1 Protein Homology CDS 37648 40269 . - 0 ID=cds-WP_001245857.1;Parent=gene-CCO34_RS16500;Dbxref=GenBank:WP_001245857.1;Name=WP_001245857.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=CCO34_RS16500;product=fimbrial usher BcfC;protein_id=WP_001245857.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 40274 40960 . - . ID=gene-CCO34_RS16505;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=CCO34_RS16505;old_locus_tag=CCO34_16500 NZ_NPMD01000007.1 Protein Homology CDS 40274 40960 . - 0 ID=cds-WP_000742551.1;Parent=gene-CCO34_RS16505;Dbxref=GenBank:WP_000742551.1;Name=WP_000742551.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=CCO34_RS16505;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000742551.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 41061 41603 . - . ID=gene-CCO34_RS16510;Name=CCO34_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16510;old_locus_tag=CCO34_16505 NZ_NPMD01000007.1 Protein Homology CDS 41061 41603 . - 0 ID=cds-WP_000743357.1;Parent=gene-CCO34_RS16510;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=CCO34_RS16510;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 42033 42737 . - . ID=gene-CCO34_RS16515;Name=CCO34_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16515;old_locus_tag=CCO34_16510 NZ_NPMD01000007.1 Protein Homology CDS 42033 42737 . - 0 ID=cds-WP_000738617.1;Parent=gene-CCO34_RS16515;Dbxref=GenBank:WP_000738617.1;Name=WP_000738617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=CCO34_RS16515;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000738617.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 43018 46014 . - . ID=gene-CCO34_RS16520;Name=CCO34_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16520;old_locus_tag=CCO34_16515 NZ_NPMD01000007.1 Protein Homology CDS 43018 46014 . - 0 ID=cds-WP_000155800.1;Parent=gene-CCO34_RS16520;Dbxref=GenBank:WP_000155800.1;Name=WP_000155800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=CCO34_RS16520;product=hypothetical protein;protein_id=WP_000155800.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 46106 48205 . - . ID=gene-CCO34_RS16525;Name=CCO34_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16525;old_locus_tag=CCO34_16520 NZ_NPMD01000007.1 Protein Homology CDS 46106 48205 . - 0 ID=cds-WP_000235793.1;Parent=gene-CCO34_RS16525;Dbxref=GenBank:WP_000235793.1;Name=WP_000235793.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=CCO34_RS16525;product=glycosyl hydrolase family 18 protein;protein_id=WP_000235793.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 48586 49029 . + . ID=gene-CCO34_RS16530;Name=CCO34_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16530;old_locus_tag=CCO34_16525 NZ_NPMD01000007.1 Protein Homology CDS 48586 49029 . + 0 ID=cds-WP_000860682.1;Parent=gene-CCO34_RS16530;Dbxref=GenBank:WP_000860682.1;Name=WP_000860682.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=CCO34_RS16530;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860682.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 49046 49579 . + . ID=gene-CCO34_RS16535;Name=CCO34_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16535;old_locus_tag=CCO34_16530 NZ_NPMD01000007.1 Protein Homology CDS 49046 49579 . + 0 ID=cds-WP_001068132.1;Parent=gene-CCO34_RS16535;Dbxref=GenBank:WP_001068132.1;Name=WP_001068132.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=CCO34_RS16535;product=glycoside hydrolase family 108 protein;protein_id=WP_001068132.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 49639 49983 . - . ID=gene-CCO34_RS16540;Name=CCO34_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16540;old_locus_tag=CCO34_16535 NZ_NPMD01000007.1 Protein Homology CDS 49639 49983 . - 0 ID=cds-WP_000026889.1;Parent=gene-CCO34_RS16540;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=CCO34_RS16540;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 50110 51057 . - . ID=gene-CCO34_RS16545;Name=CCO34_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16545;old_locus_tag=CCO34_16540 NZ_NPMD01000007.1 Protein Homology CDS 50110 51057 . - 0 ID=cds-WP_000534911.1;Parent=gene-CCO34_RS16545;Dbxref=GenBank:WP_000534911.1;Name=WP_000534911.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=CCO34_RS16545;product=LysR family transcriptional regulator;protein_id=WP_000534911.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 51338 52477 . - . ID=gene-CCO34_RS16550;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CCO34_RS16550;old_locus_tag=CCO34_16545 NZ_NPMD01000007.1 Protein Homology CDS 51338 52477 . - 0 ID=cds-WP_001119009.1;Parent=gene-CCO34_RS16550;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=CCO34_RS16550;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 52563 54479 . - . ID=gene-CCO34_RS16555;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CCO34_RS16555;old_locus_tag=CCO34_16550 NZ_NPMD01000007.1 Protein Homology CDS 52563 54479 . - 0 ID=cds-WP_000516126.1;Parent=gene-CCO34_RS16555;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=CCO34_RS16555;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 54828 55232 . + . ID=gene-CCO34_RS16560;Name=CCO34_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16560;old_locus_tag=CCO34_16555 NZ_NPMD01000007.1 Protein Homology CDS 54828 55232 . + 0 ID=cds-WP_001258090.1;Parent=gene-CCO34_RS16560;Dbxref=GenBank:WP_001258090.1;Name=WP_001258090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=CCO34_RS16560;product=DUF2541 family protein;protein_id=WP_001258090.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 55268 55981 . + . ID=gene-CCO34_RS16565;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=CCO34_RS16565;old_locus_tag=CCO34_16560 NZ_NPMD01000007.1 Protein Homology CDS 55268 55981 . + 0 ID=cds-WP_001103477.1;Parent=gene-CCO34_RS16565;Dbxref=GenBank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=CCO34_RS16565;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 56131 56697 . + . ID=gene-CCO34_RS16570;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=CCO34_RS16570;old_locus_tag=CCO34_16565 NZ_NPMD01000007.1 Protein Homology CDS 56131 56697 . + 0 ID=cds-WP_000528527.1;Parent=gene-CCO34_RS16570;Dbxref=GenBank:WP_000528527.1;Name=WP_000528527.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=CCO34_RS16570;product=acetate uptake transporter;protein_id=WP_000528527.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 56754 57344 . - . ID=gene-CCO34_RS16575;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=CCO34_RS16575;old_locus_tag=CCO34_16570 NZ_NPMD01000007.1 Protein Homology CDS 56754 57344 . - 0 ID=cds-WP_000380373.1;Parent=gene-CCO34_RS16575;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=CCO34_RS16575;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 57455 58408 . - . ID=gene-CCO34_RS16580;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO34_RS16580;old_locus_tag=CCO34_16575 NZ_NPMD01000007.1 Protein Homology CDS 57455 58408 . - 0 ID=cds-WP_000130175.1;Parent=gene-CCO34_RS16580;Dbxref=GenBank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=CCO34_RS16580;product=transaldolase;protein_id=WP_000130175.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 58677 60107 . + . ID=gene-CCO34_RS16585;Name=CCO34_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16585;old_locus_tag=CCO34_16580 NZ_NPMD01000007.1 Protein Homology CDS 58677 60107 . + 0 ID=cds-WP_001113805.1;Parent=gene-CCO34_RS16585;Dbxref=GenBank:WP_001113805.1;Name=WP_001113805.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=CCO34_RS16585;product=alanine/glycine:cation symporter family protein;protein_id=WP_001113805.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 60186 60959 . + . ID=gene-CCO34_RS16590;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=CCO34_RS16590;old_locus_tag=CCO34_16585 NZ_NPMD01000007.1 Protein Homology CDS 60186 60959 . + 0 ID=cds-WP_000906155.1;Parent=gene-CCO34_RS16590;Dbxref=GenBank:WP_000906155.1;Name=WP_000906155.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=CCO34_RS16590;product=peroxide stress protein YaaA;protein_id=WP_000906155.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 61053 62339 . - . ID=gene-CCO34_RS16595;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CCO34_RS16595;old_locus_tag=CCO34_16590 NZ_NPMD01000007.1 Protein Homology CDS 61053 62339 . - 0 ID=cds-WP_000781104.1;Parent=gene-CCO34_RS16595;Dbxref=GenBank:WP_000781104.1;Name=WP_000781104.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=CCO34_RS16595;product=threonine synthase;protein_id=WP_000781104.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 62343 63272 . - . ID=gene-CCO34_RS16600;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CCO34_RS16600;old_locus_tag=CCO34_16595 NZ_NPMD01000007.1 Protein Homology CDS 62343 63272 . - 0 ID=cds-WP_000241685.1;Parent=gene-CCO34_RS16600;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=CCO34_RS16600;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 63274 65736 . - . ID=gene-CCO34_RS16605;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=CCO34_RS16605;old_locus_tag=CCO34_16600 NZ_NPMD01000007.1 Protein Homology CDS 63274 65736 . - 0 ID=cds-WP_001264681.1;Parent=gene-CCO34_RS16605;Dbxref=GenBank:WP_001264681.1;Name=WP_001264681.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=CCO34_RS16605;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264681.1;transl_table=11 NZ_NPMD01000007.1 cmsearch sequence_feature 65762 65882 . - . ID=id-NZ_NPMD01000007.1:65762..65882;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMD01000007.1 RefSeq gene 65818 65883 . - . ID=gene-CCO34_RS16610;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=CCO34_RS16610;old_locus_tag=CCO34_16605 NZ_NPMD01000007.1 Protein Homology CDS 65818 65883 . - 0 ID=cds-WP_001575544.1;Parent=gene-CCO34_RS16610;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=CCO34_RS16610;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 66097 66783 . - . ID=gene-CCO34_RS16615;Name=CCO34_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16615;old_locus_tag=CCO34_16610 NZ_NPMD01000007.1 Protein Homology CDS 66097 66783 . - 0 ID=cds-WP_094965479.1;Parent=gene-CCO34_RS16615;Dbxref=GenBank:WP_094965479.1;Name=WP_094965479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=CCO34_RS16615;product=tRNA/rRNA methyltransferase;protein_id=WP_094965479.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 67183 67323 . - . ID=gene-CCO34_RS16620;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=CCO34_RS16620;old_locus_tag=CCO34_16615 NZ_NPMD01000007.1 Protein Homology CDS 67183 67323 . - 0 ID=cds-WP_001541509.1;Parent=gene-CCO34_RS16620;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=CCO34_RS16620;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 67419 68135 . + . ID=gene-CCO34_RS16625;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO34_RS16625;old_locus_tag=CCO34_16620 NZ_NPMD01000007.1 Protein Homology CDS 67419 68135 . + 0 ID=cds-WP_001194359.1;Parent=gene-CCO34_RS16625;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=CCO34_RS16625;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 68402 68716 . + . ID=gene-CCO34_RS16630;Name=CCO34_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16630;old_locus_tag=CCO34_16625 NZ_NPMD01000007.1 Protein Homology CDS 68402 68716 . + 0 ID=cds-WP_000749514.1;Parent=gene-CCO34_RS16630;Dbxref=GenBank:WP_000749514.1;Name=WP_000749514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=CCO34_RS16630;product=hypothetical protein;protein_id=WP_000749514.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 69101 69772 . + . ID=gene-CCO34_RS16635;Name=CCO34_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16635;old_locus_tag=CCO34_16630 NZ_NPMD01000007.1 Protein Homology CDS 69101 69772 . + 0 ID=cds-WP_000811635.1;Parent=gene-CCO34_RS16635;Dbxref=GenBank:WP_000811635.1;Name=WP_000811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=CCO34_RS16635;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811635.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 70111 70656 . + . ID=gene-CCO34_RS16640;Name=CCO34_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16640;old_locus_tag=CCO34_16635 NZ_NPMD01000007.1 Protein Homology CDS 70111 70656 . + 0 ID=cds-WP_000482235.1;Parent=gene-CCO34_RS16640;Dbxref=GenBank:WP_000482235.1;Name=WP_000482235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=CCO34_RS16640;product=fimbrial protein;protein_id=WP_000482235.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 70727 71410 . + . ID=gene-CCO34_RS16645;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO34_RS16645;old_locus_tag=CCO34_16640 NZ_NPMD01000007.1 Protein Homology CDS 70727 71410 . + 0 ID=cds-WP_000680522.1;Parent=gene-CCO34_RS16645;Dbxref=GenBank:WP_000680522.1;Name=WP_000680522.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=CCO34_RS16645;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680522.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 71456 73993 . + . ID=gene-CCO34_RS16650;Name=CCO34_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16650;old_locus_tag=CCO34_16645 NZ_NPMD01000007.1 Protein Homology CDS 71456 73993 . + 0 ID=cds-WP_001160707.1;Parent=gene-CCO34_RS16650;Dbxref=GenBank:WP_001160707.1;Name=WP_001160707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=CCO34_RS16650;product=fimbrial outer membrane usher protein;protein_id=WP_001160707.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 74011 74568 . + . ID=gene-CCO34_RS16655;Name=CCO34_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16655;old_locus_tag=CCO34_16650 NZ_NPMD01000007.1 Protein Homology CDS 74011 74568 . + 0 ID=cds-WP_001056984.1;Parent=gene-CCO34_RS16655;Dbxref=GenBank:WP_001056984.1;Name=WP_001056984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=CCO34_RS16655;product=fimbrial protein;protein_id=WP_001056984.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 74609 75694 . + . ID=gene-CCO34_RS16660;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=CCO34_RS16660;old_locus_tag=CCO34_16655 NZ_NPMD01000007.1 Protein Homology CDS 74609 75694 . + 0 ID=cds-WP_001253765.1;Parent=gene-CCO34_RS16660;Dbxref=GenBank:WP_001253765.1;Name=WP_001253765.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=CCO34_RS16660;product=fimbrial major subunit SthE;protein_id=WP_001253765.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 75752 77101 . - . ID=gene-CCO34_RS16665;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=CCO34_RS16665;old_locus_tag=CCO34_16660 NZ_NPMD01000007.1 Protein Homology CDS 75752 77101 . - 0 ID=cds-WP_000920390.1;Parent=gene-CCO34_RS16665;Dbxref=GenBank:WP_000920390.1;Name=WP_000920390.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=CCO34_RS16665;product=cell envelope integrity protein CreD;protein_id=WP_000920390.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 77159 78583 . - . ID=gene-CCO34_RS16670;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=CCO34_RS16670;old_locus_tag=CCO34_16665 NZ_NPMD01000007.1 Protein Homology CDS 77159 78583 . - 0 ID=cds-WP_001219542.1;Parent=gene-CCO34_RS16670;Dbxref=GenBank:WP_001219542.1;Name=WP_001219542.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=CCO34_RS16670;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219542.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 78583 79272 . - . ID=gene-CCO34_RS16675;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=CCO34_RS16675;old_locus_tag=CCO34_16670 NZ_NPMD01000007.1 Protein Homology CDS 78583 79272 . - 0 ID=cds-WP_001187047.1;Parent=gene-CCO34_RS16675;Dbxref=GenBank:WP_001187047.1;Name=WP_001187047.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=CCO34_RS16675;product=two-component system response regulator CreB;protein_id=WP_001187047.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 79285 79758 . - . ID=gene-CCO34_RS16680;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=CCO34_RS16680;old_locus_tag=CCO34_16675 NZ_NPMD01000007.1 Protein Homology CDS 79285 79758 . - 0 ID=cds-WP_000875811.1;Parent=gene-CCO34_RS16680;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=CCO34_RS16680;product=protein CreA;protein_id=WP_000875811.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 79970 80839 . + . ID=gene-CCO34_RS16685;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=CCO34_RS16685;old_locus_tag=CCO34_16680 NZ_NPMD01000007.1 Protein Homology CDS 79970 80839 . + 0 ID=cds-WP_000371685.1;Parent=gene-CCO34_RS16685;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=CCO34_RS16685;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 80836 81483 . - . ID=gene-CCO34_RS16690;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=CCO34_RS16690;old_locus_tag=CCO34_16685 NZ_NPMD01000007.1 Protein Homology CDS 80836 81483 . - 0 ID=cds-WP_000942363.1;Parent=gene-CCO34_RS16690;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=CCO34_RS16690;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 81532 82047 . + . ID=gene-CCO34_RS16695;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=CCO34_RS16695;old_locus_tag=CCO34_16690 NZ_NPMD01000007.1 Protein Homology CDS 81532 82047 . + 0 ID=cds-WP_000554315.1;Parent=gene-CCO34_RS16695;Dbxref=GenBank:WP_000554315.1;Name=WP_000554315.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=CCO34_RS16695;product=inosine/xanthosine triphosphatase;protein_id=WP_000554315.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 82149 82475 . - . ID=gene-CCO34_RS16700;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=CCO34_RS16700;old_locus_tag=CCO34_16695 NZ_NPMD01000007.1 Protein Homology CDS 82149 82475 . - 0 ID=cds-WP_000192002.1;Parent=gene-CCO34_RS16700;Dbxref=GenBank:WP_000192002.1;Name=WP_000192002.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=CCO34_RS16700;product=trp operon repressor;protein_id=WP_000192002.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 82533 84470 . - . ID=gene-CCO34_RS16705;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=CCO34_RS16705;old_locus_tag=CCO34_16700 NZ_NPMD01000007.1 Protein Homology CDS 82533 84470 . - 0 ID=cds-WP_139782499.1;Parent=gene-CCO34_RS16705;Dbxref=GenBank:WP_139782499.1;Name=WP_139782499.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=CCO34_RS16705;product=murein transglycosylase;protein_id=WP_139782499.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 84679 86346 . + . ID=gene-CCO34_RS16715;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=CCO34_RS16715;old_locus_tag=CCO34_16710 NZ_NPMD01000007.1 Protein Homology CDS 84679 86346 . + 0 ID=cds-WP_000046770.1;Parent=gene-CCO34_RS16715;Dbxref=GenBank:WP_000046770.1;Name=WP_000046770.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=CCO34_RS16715;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046770.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 86464 87696 . - . ID=gene-CCO34_RS16720;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=CCO34_RS16720;old_locus_tag=CCO34_16715 NZ_NPMD01000007.1 Protein Homology CDS 86464 87696 . - 0 ID=cds-WP_000093829.1;Parent=gene-CCO34_RS16720;Dbxref=GenBank:WP_000093829.1;Name=WP_000093829.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=CCO34_RS16720;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093829.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 87847 89229 . - . ID=gene-CCO34_RS16725;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CCO34_RS16725;old_locus_tag=CCO34_16720 NZ_NPMD01000007.1 Protein Homology CDS 87847 89229 . - 0 ID=cds-WP_001029720.1;Parent=gene-CCO34_RS16725;Dbxref=GenBank:WP_001029720.1;Name=WP_001029720.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=CCO34_RS16725;product=DNA repair protein RadA;protein_id=WP_001029720.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 89313 90281 . - . ID=gene-CCO34_RS16730;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO34_RS16730;old_locus_tag=CCO34_16725 NZ_NPMD01000007.1 Protein Homology CDS 89313 90281 . - 0 ID=cds-WP_001132983.1;Parent=gene-CCO34_RS16730;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=CCO34_RS16730;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 90398 91042 . + . ID=gene-CCO34_RS16740;Name=CCO34_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16740;old_locus_tag=CCO34_16735 NZ_NPMD01000007.1 Protein Homology CDS 90398 91042 . + 0 ID=cds-WP_000090067.1;Parent=gene-CCO34_RS16740;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=CCO34_RS16740;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 91076 92092 . + . ID=gene-CCO34_RS16745;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=CCO34_RS16745;old_locus_tag=CCO34_16740 NZ_NPMD01000007.1 Protein Homology CDS 91076 92092 . + 0 ID=cds-WP_000209761.1;Parent=gene-CCO34_RS16745;Dbxref=GenBank:WP_000209761.1;Name=WP_000209761.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=CCO34_RS16745;product=lipoate--protein ligase LplA;protein_id=WP_000209761.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 92405 93094 . + . ID=gene-CCO34_RS16750;Name=CCO34_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16750;old_locus_tag=CCO34_16745 NZ_NPMD01000007.1 Protein Homology CDS 92405 93094 . + 0 ID=cds-WP_080181055.1;Parent=gene-CCO34_RS16750;Dbxref=GenBank:WP_080181055.1;Name=WP_080181055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463431.1;locus_tag=CCO34_RS16750;product=DUF1120 domain-containing protein;protein_id=WP_080181055.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 93142 93831 . + . ID=gene-CCO34_RS16755;Name=CCO34_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16755;old_locus_tag=CCO34_16750 NZ_NPMD01000007.1 Protein Homology CDS 93142 93831 . + 0 ID=cds-WP_000722276.1;Parent=gene-CCO34_RS16755;Dbxref=GenBank:WP_000722276.1;Name=WP_000722276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463430.1;locus_tag=CCO34_RS16755;product=DUF1120 domain-containing protein;protein_id=WP_000722276.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 93909 94616 . + . ID=gene-CCO34_RS16760;Name=stjC;gbkey=Gene;gene=stjC;gene_biotype=protein_coding;locus_tag=CCO34_RS16760;old_locus_tag=CCO34_16755 NZ_NPMD01000007.1 Protein Homology CDS 93909 94616 . + 0 ID=cds-WP_001112038.1;Parent=gene-CCO34_RS16760;Dbxref=GenBank:WP_001112038.1;Name=WP_001112038.1;gbkey=CDS;gene=stjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463429.1;locus_tag=CCO34_RS16760;product=fimbrial biogenesis chaperone StjC;protein_id=WP_001112038.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 94630 97038 . + . ID=gene-CCO34_RS16765;Name=CCO34_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16765;old_locus_tag=CCO34_16760 NZ_NPMD01000007.1 Protein Homology CDS 94630 97038 . + 0 ID=cds-WP_000876238.1;Parent=gene-CCO34_RS16765;Dbxref=GenBank:WP_000876238.1;Name=WP_000876238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463428.1;locus_tag=CCO34_RS16765;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000876238.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 97035 97607 . + . ID=gene-CCO34_RS16770;Name=CCO34_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16770;old_locus_tag=CCO34_16765 NZ_NPMD01000007.1 Protein Homology CDS 97035 97607 . + 0 ID=cds-WP_000841606.1;Parent=gene-CCO34_RS16770;Dbxref=GenBank:WP_000841606.1;Name=WP_000841606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463427.1;locus_tag=CCO34_RS16770;product=membrane protein;protein_id=WP_000841606.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 97645 98364 . - . ID=gene-CCO34_RS16775;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CCO34_RS16775;old_locus_tag=CCO34_16770 NZ_NPMD01000007.1 Protein Homology CDS 97645 98364 . - 0 ID=cds-WP_000224864.1;Parent=gene-CCO34_RS16775;Dbxref=GenBank:WP_000224864.1;Name=WP_000224864.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=CCO34_RS16775;product=purine-nucleoside phosphorylase;protein_id=WP_000224864.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 98574 99797 . - . ID=gene-CCO34_RS16780;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CCO34_RS16780;old_locus_tag=CCO34_16775 NZ_NPMD01000007.1 Protein Homology CDS 98574 99797 . - 0 ID=cds-WP_000816454.1;Parent=gene-CCO34_RS16780;Dbxref=GenBank:WP_000816454.1;Name=WP_000816454.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=CCO34_RS16780;product=phosphopentomutase;protein_id=WP_000816454.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 99849 101171 . - . ID=gene-CCO34_RS16785;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=CCO34_RS16785;old_locus_tag=CCO34_16780 NZ_NPMD01000007.1 Protein Homology CDS 99849 101171 . - 0 ID=cds-WP_000477843.1;Parent=gene-CCO34_RS16785;Dbxref=GenBank:WP_000477843.1;Name=WP_000477843.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=CCO34_RS16785;product=thymidine phosphorylase;protein_id=WP_000477843.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 101295 102074 . - . ID=gene-CCO34_RS16790;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CCO34_RS16790;old_locus_tag=CCO34_16785 NZ_NPMD01000007.1 Protein Homology CDS 101295 102074 . - 0 ID=cds-WP_001519713.1;Parent=gene-CCO34_RS16790;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=CCO34_RS16790;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 102334 103884 . + . ID=gene-CCO34_RS16795;Name=CCO34_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16795;old_locus_tag=CCO34_16790 NZ_NPMD01000007.1 Protein Homology CDS 102334 103884 . + 0 ID=cds-WP_001111690.1;Parent=gene-CCO34_RS16795;Dbxref=GenBank:WP_001111690.1;Name=WP_001111690.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=CCO34_RS16795;product=YjjI family glycine radical enzyme;protein_id=WP_001111690.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 103856 104719 . + . ID=gene-CCO34_RS16800;Name=CCO34_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16800;old_locus_tag=CCO34_16795 NZ_NPMD01000007.1 Protein Homology CDS 103856 104719 . + 0 ID=cds-WP_001064940.1;Parent=gene-CCO34_RS16800;Dbxref=GenBank:WP_001064940.1;Name=WP_001064940.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=CCO34_RS16800;product=YjjW family glycine radical enzyme activase;protein_id=WP_001064940.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 104752 105525 . - . ID=gene-CCO34_RS16805;Name=CCO34_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16805;old_locus_tag=CCO34_16800 NZ_NPMD01000007.1 Protein Homology CDS 104752 105525 . - 0 ID=cds-WP_000119005.1;Parent=gene-CCO34_RS16805;Dbxref=GenBank:WP_000119005.1;Name=WP_000119005.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=CCO34_RS16805;product=metal-dependent hydrolase;protein_id=WP_000119005.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 105522 106595 . - . ID=gene-CCO34_RS16810;Name=CCO34_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16810;old_locus_tag=CCO34_16805 NZ_NPMD01000007.1 Protein Homology CDS 105522 106595 . - 0 ID=cds-WP_000531546.1;Parent=gene-CCO34_RS16810;Dbxref=GenBank:WP_000531546.1;Name=WP_000531546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=CCO34_RS16810;product=patatin-like phospholipase family protein;protein_id=WP_000531546.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 106719 106880 . - . ID=gene-CCO34_RS16815;Name=CCO34_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16815;old_locus_tag=CCO34_16810 NZ_NPMD01000007.1 Protein Homology CDS 106719 106880 . - 0 ID=cds-WP_000490276.1;Parent=gene-CCO34_RS16815;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=CCO34_RS16815;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 107009 107626 . - . ID=gene-CCO34_RS16820;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO34_RS16820;old_locus_tag=CCO34_16815 NZ_NPMD01000007.1 Protein Homology CDS 107009 107626 . - 0 ID=cds-WP_000178963.1;Parent=gene-CCO34_RS16820;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=CCO34_RS16820;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 108028 109617 . - . ID=gene-CCO34_RS16825;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=CCO34_RS16825;old_locus_tag=CCO34_16820 NZ_NPMD01000007.1 Protein Homology CDS 108028 109617 . - 0 ID=cds-WP_000175965.1;Parent=gene-CCO34_RS16825;Dbxref=GenBank:WP_000175965.1;Name=WP_000175965.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=CCO34_RS16825;product=peptide chain release factor 3;protein_id=WP_000175965.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 109709 110386 . - . ID=gene-CCO34_RS16830;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=CCO34_RS16830;old_locus_tag=CCO34_16825 NZ_NPMD01000007.1 Protein Homology CDS 109709 110386 . - 0 ID=cds-WP_000870728.1;Parent=gene-CCO34_RS16830;Dbxref=GenBank:WP_000870728.1;Name=WP_000870728.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=CCO34_RS16830;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870728.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 110408 110854 . - . ID=gene-CCO34_RS16835;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CCO34_RS16835;old_locus_tag=CCO34_16830 NZ_NPMD01000007.1 Protein Homology CDS 110408 110854 . - 0 ID=cds-WP_001092435.1;Parent=gene-CCO34_RS16835;Dbxref=GenBank:WP_001092435.1;Name=WP_001092435.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=CCO34_RS16835;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092435.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 110799 111236 . - . ID=gene-CCO34_RS16840;Name=CCO34_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16840;old_locus_tag=CCO34_16835 NZ_NPMD01000007.1 Protein Homology CDS 110799 111236 . - 0 ID=cds-WP_000203996.1;Parent=gene-CCO34_RS16840;Dbxref=GenBank:WP_000203996.1;Name=WP_000203996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=CCO34_RS16840;product=DNA polymerase III subunit psi;protein_id=WP_000203996.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 111339 112367 . + . ID=gene-CCO34_RS16845;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=CCO34_RS16845;old_locus_tag=CCO34_16840 NZ_NPMD01000007.1 Protein Homology CDS 111339 112367 . + 0 ID=cds-WP_001272277.1;Parent=gene-CCO34_RS16845;Dbxref=GenBank:WP_001272277.1;Name=WP_001272277.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=CCO34_RS16845;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272277.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 112558 112644 . + . ID=gene-CCO34_RS16850;Name=CCO34_RS16850;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS16850;old_locus_tag=CCO34_16845 NZ_NPMD01000007.1 tRNAscan-SE tRNA 112558 112644 . + . ID=rna-CCO34_RS16850;Parent=gene-CCO34_RS16850;anticodon=(pos:112592..112594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS16850;product=tRNA-Leu NZ_NPMD01000007.1 tRNAscan-SE exon 112558 112644 . + . ID=exon-CCO34_RS16850-1;Parent=rna-CCO34_RS16850;anticodon=(pos:112592..112594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS16850;product=tRNA-Leu NZ_NPMD01000007.1 RefSeq gene 112672 112758 . + . ID=gene-CCO34_RS16855;Name=CCO34_RS16855;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS16855;old_locus_tag=CCO34_16850 NZ_NPMD01000007.1 tRNAscan-SE tRNA 112672 112758 . + . ID=rna-CCO34_RS16855;Parent=gene-CCO34_RS16855;anticodon=(pos:112706..112708);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS16855;product=tRNA-Leu NZ_NPMD01000007.1 tRNAscan-SE exon 112672 112758 . + . ID=exon-CCO34_RS16855-1;Parent=rna-CCO34_RS16855;anticodon=(pos:112706..112708);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS16855;product=tRNA-Leu NZ_NPMD01000007.1 RefSeq gene 112790 112876 . + . ID=gene-CCO34_RS16860;Name=CCO34_RS16860;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS16860;old_locus_tag=CCO34_16855 NZ_NPMD01000007.1 tRNAscan-SE tRNA 112790 112876 . + . ID=rna-CCO34_RS16860;Parent=gene-CCO34_RS16860;anticodon=(pos:112824..112826);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS16860;product=tRNA-Leu NZ_NPMD01000007.1 tRNAscan-SE exon 112790 112876 . + . ID=exon-CCO34_RS16860-1;Parent=rna-CCO34_RS16860;anticodon=(pos:112824..112826);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS16860;product=tRNA-Leu NZ_NPMD01000007.1 RefSeq gene 112908 113144 . - . ID=gene-CCO34_RS16865;Name=CCO34_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16865;old_locus_tag=CCO34_16860 NZ_NPMD01000007.1 Protein Homology CDS 112908 113144 . - 0 ID=cds-WP_000941876.1;Parent=gene-CCO34_RS16865;Dbxref=GenBank:WP_000941876.1;Name=WP_000941876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=CCO34_RS16865;product=DUF1435 domain-containing protein;protein_id=WP_000941876.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 113395 114459 . + . ID=gene-CCO34_RS16870;Name=CCO34_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16870;old_locus_tag=CCO34_16865 NZ_NPMD01000007.1 Protein Homology CDS 113395 114459 . + 0 ID=cds-WP_000211207.1;Parent=gene-CCO34_RS16870;Dbxref=GenBank:WP_000211207.1;Name=WP_000211207.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=CCO34_RS16870;product=GGDEF domain-containing protein;protein_id=WP_000211207.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 114580 115368 . + . ID=gene-CCO34_RS16875;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=CCO34_RS16875;old_locus_tag=CCO34_16870 NZ_NPMD01000007.1 Protein Homology CDS 114580 115368 . + 0 ID=cds-WP_000331527.1;Parent=gene-CCO34_RS16875;Dbxref=GenBank:WP_000331527.1;Name=WP_000331527.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=CCO34_RS16875;product=siderophore-iron reductase FhuF;protein_id=WP_000331527.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 115519 115977 . + . ID=gene-CCO34_RS16880;Name=CCO34_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16880;old_locus_tag=CCO34_16875 NZ_NPMD01000007.1 Protein Homology CDS 115519 115977 . + 0 ID=cds-WP_000058276.1;Parent=gene-CCO34_RS16880;Dbxref=GenBank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=CCO34_RS16880;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 116028 116702 . - . ID=gene-CCO34_RS16885;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=CCO34_RS16885;old_locus_tag=CCO34_16880 NZ_NPMD01000007.1 Protein Homology CDS 116028 116702 . - 0 ID=cds-WP_000431546.1;Parent=gene-CCO34_RS16885;Dbxref=GenBank:WP_000431546.1;Name=WP_000431546.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=CCO34_RS16885;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431546.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 116663 117388 . - . ID=gene-CCO34_RS16890;Name=CCO34_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16890;old_locus_tag=CCO34_16885 NZ_NPMD01000007.1 Protein Homology CDS 116663 117388 . - 0 ID=cds-WP_000936666.1;Parent=gene-CCO34_RS16890;Dbxref=GenBank:WP_000936666.1;Name=WP_000936666.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=CCO34_RS16890;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_000936666.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 118101 118877 . + . ID=gene-CCO34_RS16895;Name=CCO34_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16895;old_locus_tag=CCO34_16890 NZ_NPMD01000007.1 Protein Homology CDS 118101 118877 . + 0 ID=cds-WP_001674846.1;Parent=gene-CCO34_RS16895;Dbxref=GenBank:WP_001674846.1;Name=WP_001674846.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=CCO34_RS16895;product=threonine/serine ThrE exporter family protein;protein_id=WP_001674846.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 118868 119341 . + . ID=gene-CCO34_RS16900;Name=CCO34_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16900;old_locus_tag=CCO34_16895 NZ_NPMD01000007.1 Protein Homology CDS 118868 119341 . + 0 ID=cds-WP_000511329.1;Parent=gene-CCO34_RS16900;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=CCO34_RS16900;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 119434 119973 . + . ID=gene-CCO34_RS16905;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=CCO34_RS16905;old_locus_tag=CCO34_16900 NZ_NPMD01000007.1 Protein Homology CDS 119434 119973 . + 0 ID=cds-WP_000098578.1;Parent=gene-CCO34_RS16905;Dbxref=GenBank:WP_000098578.1;Name=WP_000098578.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=CCO34_RS16905;product=primosomal protein DnaT;protein_id=WP_000098578.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 119976 120713 . + . ID=gene-CCO34_RS16910;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=CCO34_RS16910;old_locus_tag=CCO34_16905 NZ_NPMD01000007.1 Protein Homology CDS 119976 120713 . + 0 ID=cds-WP_000799924.1;Parent=gene-CCO34_RS16910;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=CCO34_RS16910;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 120771 121232 . + . ID=gene-CCO34_RS16915;Name=CCO34_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16915;old_locus_tag=CCO34_16910 NZ_NPMD01000007.1 Protein Homology CDS 120771 121232 . + 0 ID=cds-WP_001090312.1;Parent=gene-CCO34_RS16915;Dbxref=GenBank:WP_001090312.1;Name=WP_001090312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=CCO34_RS16915;product=DUF2501 domain-containing protein;protein_id=WP_001090312.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 121515 123806 . + . ID=gene-CCO34_RS16920;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=CCO34_RS16920;old_locus_tag=CCO34_16915 NZ_NPMD01000007.1 Protein Homology CDS 121515 123806 . + 0 ID=cds-WP_080181014.1;Parent=gene-CCO34_RS16920;Dbxref=GenBank:WP_080181014.1;Name=WP_080181014.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=CCO34_RS16920;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_080181014.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 123940 124950 . - . ID=gene-CCO34_RS16925;Name=CCO34_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16925;old_locus_tag=CCO34_16920 NZ_NPMD01000007.1 Protein Homology CDS 123940 124950 . - 0 ID=cds-WP_000900307.1;Parent=gene-CCO34_RS16925;Dbxref=GenBank:WP_000900307.1;Name=WP_000900307.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=CCO34_RS16925;product=SIS domain-containing protein;protein_id=WP_000900307.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 124968 126029 . - . ID=gene-CCO34_RS16930;Name=CCO34_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16930;old_locus_tag=CCO34_16925 NZ_NPMD01000007.1 Protein Homology CDS 124968 126029 . - 0 ID=cds-WP_000075413.1;Parent=gene-CCO34_RS16930;Dbxref=GenBank:WP_000075413.1;Name=WP_000075413.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=CCO34_RS16930;product=SIS domain-containing protein;protein_id=WP_000075413.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 126042 126890 . - . ID=gene-CCO34_RS16935;Name=CCO34_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16935;old_locus_tag=CCO34_16930 NZ_NPMD01000007.1 Protein Homology CDS 126042 126890 . - 0 ID=cds-WP_000178065.1;Parent=gene-CCO34_RS16935;Dbxref=GenBank:WP_000178065.1;Name=WP_000178065.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=CCO34_RS16935;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178065.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 126868 127647 . - . ID=gene-CCO34_RS16940;Name=CCO34_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16940;old_locus_tag=CCO34_16935 NZ_NPMD01000007.1 Protein Homology CDS 126868 127647 . - 0 ID=cds-WP_000228863.1;Parent=gene-CCO34_RS16940;Dbxref=GenBank:WP_000228863.1;Name=WP_000228863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=CCO34_RS16940;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000228863.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 127673 128134 . - . ID=gene-CCO34_RS16945;Name=CCO34_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16945;old_locus_tag=CCO34_16940 NZ_NPMD01000007.1 Protein Homology CDS 127673 128134 . - 0 ID=cds-WP_000634727.1;Parent=gene-CCO34_RS16945;Dbxref=GenBank:WP_000634727.1;Name=WP_000634727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=CCO34_RS16945;product=PTS sugar transporter subunit IIB;protein_id=WP_000634727.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 128149 128571 . - . ID=gene-CCO34_RS16950;Name=CCO34_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16950;old_locus_tag=CCO34_16945 NZ_NPMD01000007.1 Protein Homology CDS 128149 128571 . - 0 ID=cds-WP_000820693.1;Parent=gene-CCO34_RS16950;Dbxref=GenBank:WP_000820693.1;Name=WP_000820693.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=CCO34_RS16950;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 128673 131438 . - . ID=gene-CCO34_RS16955;Name=CCO34_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16955;old_locus_tag=CCO34_16950 NZ_NPMD01000007.1 Protein Homology CDS 128673 131438 . - 0 ID=cds-WP_023228948.1;Parent=gene-CCO34_RS16955;Dbxref=GenBank:WP_023228948.1;Name=WP_023228948.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=CCO34_RS16955;product=sigma 54-interacting transcriptional regulator;protein_id=WP_023228948.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 131762 133423 . - . ID=gene-CCO34_RS16960;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=CCO34_RS16960;old_locus_tag=CCO34_16955 NZ_NPMD01000007.1 Protein Homology CDS 131762 133423 . - 0 ID=cds-WP_000919517.1;Parent=gene-CCO34_RS16960;Dbxref=GenBank:WP_000919517.1;Name=WP_000919517.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=CCO34_RS16960;product=methyl-accepting chemotaxis protein;protein_id=WP_000919517.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 133790 135940 . + . ID=gene-CCO34_RS16965;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=CCO34_RS16965;old_locus_tag=CCO34_16960 NZ_NPMD01000007.1 Protein Homology CDS 133790 135940 . + 0 ID=cds-WP_000379929.1;Parent=gene-CCO34_RS16965;Dbxref=GenBank:WP_000379929.1;Name=WP_000379929.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=CCO34_RS16965;product=pyruvate/proton symporter BtsT;protein_id=WP_000379929.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 136035 136238 . + . ID=gene-CCO34_RS16970;Name=CCO34_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16970;old_locus_tag=CCO34_16965 NZ_NPMD01000007.1 Protein Homology CDS 136035 136238 . + 0 ID=cds-WP_000460616.1;Parent=gene-CCO34_RS16970;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=CCO34_RS16970;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 136249 137205 . + . ID=gene-CCO34_RS16975;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=CCO34_RS16975;old_locus_tag=CCO34_16970 NZ_NPMD01000007.1 Protein Homology CDS 136249 137205 . + 0 ID=cds-WP_000612222.1;Parent=gene-CCO34_RS16975;Dbxref=GenBank:WP_000612222.1;Name=WP_000612222.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=CCO34_RS16975;product=GTPase;protein_id=WP_000612222.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 137321 138289 . - . ID=gene-CCO34_RS16980;Name=CCO34_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16980;old_locus_tag=CCO34_16975 NZ_NPMD01000007.1 Protein Homology CDS 137321 138289 . - 0 ID=cds-WP_000452020.1;Parent=gene-CCO34_RS16980;Dbxref=GenBank:WP_000452020.1;Name=WP_000452020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441751.1;locus_tag=CCO34_RS16980;product=hypothetical protein;protein_id=WP_000452020.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 138431 140860 . + . ID=gene-CCO34_RS16985;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=CCO34_RS16985;old_locus_tag=CCO34_16980 NZ_NPMD01000007.1 Protein Homology CDS 138431 140860 . + 0 ID=cds-WP_000774450.1;Parent=gene-CCO34_RS16985;Dbxref=GenBank:WP_000774450.1;Name=WP_000774450.1;Ontology_term=GO:0009307,GO:0003678,GO:0015666;gbkey=CDS;gene=hsdR;go_function=DNA helicase activity|0003678||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=CCO34_RS16985;product=EcoAI/FtnUII family type I restriction enzme subunit R;protein_id=WP_000774450.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 140931 142400 . + . ID=gene-CCO34_RS16990;Name=CCO34_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16990;old_locus_tag=CCO34_16985 NZ_NPMD01000007.1 Protein Homology CDS 140931 142400 . + 0 ID=cds-WP_000028346.1;Parent=gene-CCO34_RS16990;Dbxref=GenBank:WP_000028346.1;Name=WP_000028346.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028345.1;locus_tag=CCO34_RS16990;product=N-6 DNA methylase;protein_id=WP_000028346.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 142400 144145 . + . ID=gene-CCO34_RS16995;Name=CCO34_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS16995;old_locus_tag=CCO34_16990 NZ_NPMD01000007.1 Protein Homology CDS 142400 144145 . + 0 ID=cds-WP_000257594.1;Parent=gene-CCO34_RS16995;Dbxref=GenBank:WP_000257594.1;Name=WP_000257594.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149500.1;locus_tag=CCO34_RS16995;product=restriction endonuclease subunit S;protein_id=WP_000257594.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 144362 144682 . + . ID=gene-CCO34_RS17000;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=CCO34_RS17000;old_locus_tag=CCO34_16995 NZ_NPMD01000007.1 Protein Homology CDS 144362 144682 . + 0 ID=cds-WP_000210979.1;Parent=gene-CCO34_RS17000;Dbxref=GenBank:WP_000210979.1;Name=WP_000210979.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551937.1;locus_tag=CCO34_RS17000;product=endoribonuclease SymE;protein_id=WP_000210979.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 144727 146580 . - . ID=gene-CCO34_RS17005;Name=CCO34_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17005;old_locus_tag=CCO34_17000 NZ_NPMD01000007.1 Protein Homology CDS 144727 146580 . - 0 ID=cds-WP_000102840.1;Parent=gene-CCO34_RS17005;Dbxref=GenBank:WP_000102840.1;Name=WP_000102840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102841.1;locus_tag=CCO34_RS17005;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_000102840.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 146716 147636 . + . ID=gene-CCO34_RS17010;Name=CCO34_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17010;old_locus_tag=CCO34_17005 NZ_NPMD01000007.1 Protein Homology CDS 146716 147636 . + 0 ID=cds-WP_001280247.1;Parent=gene-CCO34_RS17010;Dbxref=GenBank:WP_001280247.1;Name=WP_001280247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=CCO34_RS17010;product=DUF5655 domain-containing protein;protein_id=WP_001280247.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 147713 147877 . - . ID=gene-CCO34_RS17015;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=CCO34_RS17015;old_locus_tag=CCO34_17010 NZ_NPMD01000007.1 Protein Homology CDS 147713 147877 . - 0 ID=cds-WP_000397915.1;Parent=gene-CCO34_RS17015;Dbxref=GenBank:WP_000397915.1;Name=WP_000397915.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=CCO34_RS17015;product=DUF1127 domain-containing protein YjiS;protein_id=WP_000397915.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 147844 147987 . + . ID=gene-CCO34_RS17020;Name=CCO34_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17020;old_locus_tag=CCO34_17015 NZ_NPMD01000007.1 Protein Homology CDS 147844 147987 . + 0 ID=cds-WP_031601813.1;Parent=gene-CCO34_RS17020;Dbxref=GenBank:WP_031601813.1;Name=WP_031601813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=CCO34_RS17020;product=hypothetical protein;protein_id=WP_031601813.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 148083 149453 . - . ID=gene-CCO34_RS17025;Name=CCO34_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17025;old_locus_tag=CCO34_17020 NZ_NPMD01000007.1 Protein Homology CDS 148083 149453 . - 0 ID=cds-WP_000331429.1;Parent=gene-CCO34_RS17025;Dbxref=GenBank:WP_000331429.1;Name=WP_000331429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331412.1;locus_tag=CCO34_RS17025;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000331429.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 149634 150587 . - . ID=gene-CCO34_RS17030;Name=CCO34_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17030;old_locus_tag=CCO34_17025 NZ_NPMD01000007.1 Protein Homology CDS 149634 150587 . - 0 ID=cds-WP_000750002.1;Parent=gene-CCO34_RS17030;Dbxref=GenBank:WP_000750002.1;Name=WP_000750002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=CCO34_RS17030;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000750002.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 151066 152307 . + . ID=gene-CCO34_RS17035;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=CCO34_RS17035;old_locus_tag=CCO34_17030 NZ_NPMD01000007.1 Protein Homology CDS 151066 152307 . + 0 ID=cds-WP_001188918.1;Parent=gene-CCO34_RS17035;Dbxref=GenBank:WP_001188918.1;Name=WP_001188918.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=CCO34_RS17035;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001188918.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 152394 153665 . + . ID=gene-CCO34_RS17040;Name=CCO34_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17040;old_locus_tag=CCO34_17035 NZ_NPMD01000007.1 Protein Homology CDS 152394 153665 . + 0 ID=cds-WP_001033043.1;Parent=gene-CCO34_RS17040;Dbxref=GenBank:WP_001033043.1;Name=WP_001033043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=CCO34_RS17040;product=DUF445 domain-containing protein;protein_id=WP_001033043.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 153885 155069 . + . ID=gene-CCO34_RS17045;Name=CCO34_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17045;old_locus_tag=CCO34_17040 NZ_NPMD01000007.1 Protein Homology CDS 153885 155069 . + 0 ID=cds-WP_000233267.1;Parent=gene-CCO34_RS17045;Dbxref=GenBank:WP_000233267.1;Name=WP_000233267.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=CCO34_RS17045;product=MFS transporter;protein_id=WP_000233267.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 155941 156612 . + . ID=gene-CCO34_RS17050;Name=CCO34_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17050;old_locus_tag=CCO34_17045 NZ_NPMD01000007.1 Protein Homology CDS 155941 156612 . + 0 ID=cds-WP_000068752.1;Parent=gene-CCO34_RS17050;Dbxref=GenBank:WP_000068752.1;Name=WP_000068752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=CCO34_RS17050;product=nucleoside recognition domain-containing protein;protein_id=WP_000068752.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 156609 157070 . + . ID=gene-CCO34_RS17055;Name=CCO34_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17055;old_locus_tag=CCO34_17050 NZ_NPMD01000007.1 Protein Homology CDS 156609 157070 . + 0 ID=cds-WP_000211979.1;Parent=gene-CCO34_RS17055;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=CCO34_RS17055;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 157083 158255 . + . ID=gene-CCO34_RS17060;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=CCO34_RS17060;old_locus_tag=CCO34_17055 NZ_NPMD01000007.1 Protein Homology CDS 157083 158255 . + 0 ID=cds-WP_001113057.1;Parent=gene-CCO34_RS17060;Dbxref=GenBank:WP_001113057.1;Name=WP_001113057.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=CCO34_RS17060;product=beta-aspartyl-peptidase;protein_id=WP_001113057.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 158374 159282 . + . ID=gene-CCO34_RS17065;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=CCO34_RS17065;old_locus_tag=CCO34_17060 NZ_NPMD01000007.1 Protein Homology CDS 158374 159282 . + 0 ID=cds-WP_000383508.1;Parent=gene-CCO34_RS17065;Dbxref=GenBank:WP_000383508.1;Name=WP_000383508.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=CCO34_RS17065;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383508.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 159288 160022 . - . ID=gene-CCO34_RS17070;Name=CCO34_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17070;old_locus_tag=CCO34_17065 NZ_NPMD01000007.1 Protein Homology CDS 159288 160022 . - 0 ID=cds-WP_000683254.1;Parent=gene-CCO34_RS17070;Dbxref=GenBank:WP_000683254.1;Name=WP_000683254.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=CCO34_RS17070;product=aspartate/glutamate racemase family protein;protein_id=WP_000683254.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 160261 160791 . - . ID=gene-CCO34_RS17080;Name=CCO34_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17080;old_locus_tag=CCO34_17075 NZ_NPMD01000007.1 Protein Homology CDS 160261 160791 . - 0 ID=cds-WP_000907671.1;Parent=gene-CCO34_RS17080;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=CCO34_RS17080;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 161508 162521 . + . ID=gene-CCO34_RS17085;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO34_RS17085;old_locus_tag=CCO34_17080 NZ_NPMD01000007.1 Protein Homology CDS 161508 162521 . + 0 ID=cds-WP_001094607.1;Parent=gene-CCO34_RS17085;Dbxref=GenBank:WP_001094607.1;Name=WP_001094607.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=CCO34_RS17085;product=tryptophan--tRNA ligase;protein_id=WP_001094607.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 162522 163295 . - . ID=gene-CCO34_RS17090;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=CCO34_RS17090;old_locus_tag=CCO34_17085 NZ_NPMD01000007.1 Protein Homology CDS 162522 163295 . - 0 ID=cds-WP_000841640.1;Parent=gene-CCO34_RS17090;Dbxref=GenBank:WP_000841640.1;Name=WP_000841640.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=CCO34_RS17090;product=Uxu operon transcriptional regulator;protein_id=WP_000841640.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 163645 164319 . + . ID=gene-CCO34_RS17100;Name=CCO34_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17100;old_locus_tag=CCO34_17095 NZ_NPMD01000007.1 Protein Homology CDS 163645 164319 . + 0 ID=cds-WP_000588686.1;Parent=gene-CCO34_RS17100;Dbxref=GenBank:WP_000588686.1;Name=WP_000588686.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=CCO34_RS17100;product=dienelactone hydrolase family protein;protein_id=WP_000588686.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 164316 164777 . - . ID=gene-CCO34_RS17105;Name=CCO34_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17105;old_locus_tag=CCO34_17100 NZ_NPMD01000007.1 Protein Homology CDS 164316 164777 . - 0 ID=cds-WP_001654330.1;Parent=gene-CCO34_RS17105;Dbxref=GenBank:WP_001654330.1;Name=WP_001654330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=CCO34_RS17105;product=DUF302 domain-containing protein;protein_id=WP_001654330.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 164982 165893 . - . ID=gene-CCO34_RS17110;Name=CCO34_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17110;old_locus_tag=CCO34_17105 NZ_NPMD01000007.1 Protein Homology CDS 164982 165893 . - 0 ID=cds-WP_000556777.1;Parent=gene-CCO34_RS17110;Dbxref=GenBank:WP_000556777.1;Name=WP_000556777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=CCO34_RS17110;product=STM4504/CBY_0614 family protein;protein_id=WP_000556777.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 166169 167164 . - . ID=gene-CCO34_RS17115;Name=CCO34_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17115;old_locus_tag=CCO34_17110 NZ_NPMD01000007.1 Protein Homology CDS 166169 167164 . - 0 ID=cds-WP_001240360.1;Parent=gene-CCO34_RS17115;Dbxref=GenBank:WP_001240360.1;Name=WP_001240360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240361.1;locus_tag=CCO34_RS17115;product=membrane protein;protein_id=WP_001240360.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 167416 168024 . - . ID=gene-CCO34_RS17120;Name=CCO34_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17120;old_locus_tag=CCO34_17115 NZ_NPMD01000007.1 Protein Homology CDS 167416 168024 . - 0 ID=cds-WP_000864866.1;Parent=gene-CCO34_RS17120;Dbxref=GenBank:WP_000864866.1;Name=WP_000864866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=CCO34_RS17120;product=DUF1062 domain-containing protein;protein_id=WP_000864866.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 168512 168769 . + . ID=gene-CCO34_RS17130;Name=CCO34_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17130;old_locus_tag=CCO34_17125 NZ_NPMD01000007.1 Protein Homology CDS 168512 168769 . + 0 ID=cds-WP_001054377.1;Parent=gene-CCO34_RS17130;Dbxref=GenBank:WP_001054377.1;Name=WP_001054377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=CCO34_RS17130;product=YjhX family toxin;protein_id=WP_001054377.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 168774 170405 . + . ID=gene-CCO34_RS17135;Name=CCO34_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17135;old_locus_tag=CCO34_17130 NZ_NPMD01000007.1 Protein Homology CDS 168774 170405 . + 0 ID=cds-WP_000979781.1;Parent=gene-CCO34_RS17135;Dbxref=GenBank:WP_000979781.1;Name=WP_000979781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=CCO34_RS17135;product=methyltransferase domain-containing protein;protein_id=WP_000979781.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 170965 171681 . + . ID=gene-CCO34_RS17145;Name=CCO34_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17145;old_locus_tag=CCO34_17140 NZ_NPMD01000007.1 Protein Homology CDS 170965 171681 . + 0 ID=cds-WP_000532939.1;Parent=gene-CCO34_RS17145;Dbxref=GenBank:WP_000532939.1;Name=WP_000532939.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=CCO34_RS17145;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 172161 173036 . - . ID=gene-CCO34_RS17150;Name=CCO34_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17150;old_locus_tag=CCO34_17145 NZ_NPMD01000007.1 Protein Homology CDS 172161 173036 . - 0 ID=cds-WP_000199881.1;Parent=gene-CCO34_RS17150;Dbxref=GenBank:WP_000199881.1;Name=WP_000199881.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=CCO34_RS17150;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=WP_000199881.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 173434 174581 . - . ID=gene-CCO34_RS17155;Name=CCO34_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17155;old_locus_tag=CCO34_17150 NZ_NPMD01000007.1 Protein Homology CDS 174344 174581 . - 0 ID=cds-WP_086016622.1;Parent=gene-CCO34_RS17155;Dbxref=GenBank:WP_086016622.1;Name=WP_086016622.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=CCO34_RS17155;product=IS3 family transposase;protein_id=WP_086016622.1;transl_table=11 NZ_NPMD01000007.1 Protein Homology CDS 173434 174344 . - 2 ID=cds-WP_086016622.1;Parent=gene-CCO34_RS17155;Dbxref=GenBank:WP_086016622.1;Name=WP_086016622.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=CCO34_RS17155;product=IS3 family transposase;protein_id=WP_086016622.1;transl_table=11 NZ_NPMD01000007.1 RefSeq pseudogene 174646 174927 . + . ID=gene-CCO34_RS17160;Name=pilV;end_range=174927,.;gbkey=Gene;gene=pilV;gene_biotype=pseudogene;locus_tag=CCO34_RS17160;old_locus_tag=CCO34_17155;partial=true;pseudo=true;start_range=.,174646 NZ_NPMD01000007.1 Protein Homology CDS 174646 174927 . + 0 ID=cds-CCO34_RS17160;Parent=gene-CCO34_RS17160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=174927,.;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004164871.1;locus_tag=CCO34_RS17160;partial=true;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;pseudo=true;start_range=.,174646;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 174943 175134 . + . ID=gene-CCO34_RS25570;Name=CCO34_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25570 NZ_NPMD01000007.1 GeneMarkS-2+ CDS 174943 175134 . + 0 ID=cds-WP_162785927.1;Parent=gene-CCO34_RS25570;Dbxref=GenBank:WP_162785927.1;Name=WP_162785927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25570;product=hypothetical protein;protein_id=WP_162785927.1;transl_table=11 NZ_NPMD01000007.1 RefSeq pseudogene 175290 175493 . + . ID=gene-CCO34_RS26095;Name=CCO34_RS26095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26095;old_locus_tag=CCO34_17160;partial=true;pseudo=true;start_range=.,175290 NZ_NPMD01000007.1 Protein Homology CDS 175290 175493 . + 0 ID=cds-CCO34_RS26095;Parent=gene-CCO34_RS26095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090616.1;locus_tag=CCO34_RS26095;partial=true;product=conjugal transfer protein TraD;pseudo=true;start_range=.,175290;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 175591 176478 . - . ID=gene-CCO34_RS17170;Name=CCO34_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17170;old_locus_tag=CCO34_17165 NZ_NPMD01000007.1 Protein Homology CDS 175591 176478 . - 0 ID=cds-WP_000594647.1;Parent=gene-CCO34_RS17170;Dbxref=GenBank:WP_000594647.1;Name=WP_000594647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000594647.1;locus_tag=CCO34_RS17170;product=Bpu10I family restriction endonuclease;protein_id=WP_000594647.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 176465 177649 . - . ID=gene-CCO34_RS17175;Name=CCO34_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17175;old_locus_tag=CCO34_17170 NZ_NPMD01000007.1 Protein Homology CDS 176465 177649 . - 0 ID=cds-WP_000048865.1;Parent=gene-CCO34_RS17175;Dbxref=GenBank:WP_000048865.1;Name=WP_000048865.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000048865.1;locus_tag=CCO34_RS17175;product=DNA cytosine methyltransferase;protein_id=WP_000048865.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 177717 178967 . - . ID=gene-CCO34_RS17180;Name=CCO34_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17180;old_locus_tag=CCO34_17175 NZ_NPMD01000007.1 Protein Homology CDS 177717 178967 . - 0 ID=cds-WP_001218964.1;Parent=gene-CCO34_RS17180;Dbxref=GenBank:WP_001218964.1;Name=WP_001218964.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245212.1;locus_tag=CCO34_RS17180;product=tyrosine-type recombinase/integrase;protein_id=WP_001218964.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 179156 179240 . - . ID=gene-CCO34_RS17185;Name=CCO34_RS17185;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS17185;old_locus_tag=CCO34_17180 NZ_NPMD01000007.1 tRNAscan-SE tRNA 179156 179240 . - . ID=rna-CCO34_RS17185;Parent=gene-CCO34_RS17185;anticodon=(pos:complement(179204..179206));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS17185;product=tRNA-Leu NZ_NPMD01000007.1 tRNAscan-SE exon 179156 179240 . - . ID=exon-CCO34_RS17185-1;Parent=rna-CCO34_RS17185;anticodon=(pos:complement(179204..179206));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS17185;product=tRNA-Leu NZ_NPMD01000007.1 RefSeq gene 179463 180482 . + . ID=gene-CCO34_RS17190;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=CCO34_RS17190;old_locus_tag=CCO34_17185 NZ_NPMD01000007.1 Protein Homology CDS 179463 180482 . + 0 ID=cds-WP_000152563.1;Parent=gene-CCO34_RS17190;Dbxref=GenBank:WP_000152563.1;Name=WP_000152563.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=CCO34_RS17190;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000152563.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 180510 181040 . - . ID=gene-CCO34_RS17195;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=CCO34_RS17195;old_locus_tag=CCO34_17190 NZ_NPMD01000007.1 Protein Homology CDS 180510 181040 . - 0 ID=cds-WP_000896759.1;Parent=gene-CCO34_RS17195;Dbxref=GenBank:WP_000896759.1;Name=WP_000896759.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=CCO34_RS17195;product=gluconokinase;protein_id=WP_000896759.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 181257 182288 . + . ID=gene-CCO34_RS17200;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=CCO34_RS17200;old_locus_tag=CCO34_17195 NZ_NPMD01000007.1 Protein Homology CDS 181257 182288 . + 0 ID=cds-WP_000453338.1;Parent=gene-CCO34_RS17200;Dbxref=GenBank:WP_000453338.1;Name=WP_000453338.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=CCO34_RS17200;product=L-idonate 5-dehydrogenase;protein_id=WP_000453338.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 182313 183077 . + . ID=gene-CCO34_RS17205;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=CCO34_RS17205;old_locus_tag=CCO34_17200 NZ_NPMD01000007.1 Protein Homology CDS 182313 183077 . + 0 ID=cds-WP_000998688.1;Parent=gene-CCO34_RS17205;Dbxref=GenBank:WP_000998688.1;Name=WP_000998688.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=CCO34_RS17205;product=gluconate 5-dehydrogenase;protein_id=WP_000998688.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 183139 184458 . + . ID=gene-CCO34_RS17210;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=CCO34_RS17210;old_locus_tag=CCO34_17205 NZ_NPMD01000007.1 Protein Homology CDS 183139 184458 . + 0 ID=cds-WP_001128356.1;Parent=gene-CCO34_RS17210;Dbxref=GenBank:WP_001128356.1;Name=WP_001128356.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=CCO34_RS17210;product=gnt-II system L-idonate transporter;protein_id=WP_001128356.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 184522 185520 . + . ID=gene-CCO34_RS17215;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=CCO34_RS17215;old_locus_tag=CCO34_17210 NZ_NPMD01000007.1 Protein Homology CDS 184522 185520 . + 0 ID=cds-WP_001244061.1;Parent=gene-CCO34_RS17215;Dbxref=GenBank:WP_001244061.1;Name=WP_001244061.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=CCO34_RS17215;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244061.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 185715 186797 . - . ID=gene-CCO34_RS17220;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=CCO34_RS17220;old_locus_tag=CCO34_17215 NZ_NPMD01000007.1 Protein Homology CDS 185715 186797 . - 0 ID=cds-WP_001182242.1;Parent=gene-CCO34_RS17220;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=CCO34_RS17220;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 186797 187897 . - . ID=gene-CCO34_RS17225;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=CCO34_RS17225;old_locus_tag=CCO34_17220 NZ_NPMD01000007.1 Protein Homology CDS 186797 187897 . - 0 ID=cds-WP_000584132.1;Parent=gene-CCO34_RS17225;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=CCO34_RS17225;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 187961 188011 . - . ID=gene-CCO34_RS25845;Name=CCO34_RS25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25845 NZ_NPMD01000007.1 Protein Homology CDS 187961 188011 . - 0 ID=cds-WP_212724070.1;Parent=gene-CCO34_RS25845;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=CCO34_RS25845;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 188292 189803 . + . ID=gene-CCO34_RS17240;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=CCO34_RS17240;old_locus_tag=CCO34_17235 NZ_NPMD01000007.1 Protein Homology CDS 188292 189803 . + 0 ID=cds-WP_000397158.1;Parent=gene-CCO34_RS17240;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=CCO34_RS17240;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 189940 190383 . + . ID=gene-CCO34_RS17245;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=CCO34_RS17245;old_locus_tag=CCO34_17240 NZ_NPMD01000007.1 Protein Homology CDS 189940 190383 . + 0 ID=cds-WP_001523689.1;Parent=gene-CCO34_RS17245;Dbxref=GenBank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=CCO34_RS17245;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 190383 193238 . + . ID=gene-CCO34_RS17250;Name=CCO34_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17250;old_locus_tag=CCO34_17245 NZ_NPMD01000007.1 Protein Homology CDS 190383 193238 . + 0 ID=cds-WP_000416328.1;Parent=gene-CCO34_RS17250;Dbxref=GenBank:WP_000416328.1;Name=WP_000416328.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=CCO34_RS17250;product=valine--tRNA ligase;protein_id=WP_000416328.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 193380 194567 . - . ID=gene-CCO34_RS17255;Name=CCO34_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17255;old_locus_tag=CCO34_17250 NZ_NPMD01000007.1 Protein Homology CDS 193380 194567 . - 0 ID=cds-WP_001066979.1;Parent=gene-CCO34_RS17255;Dbxref=GenBank:WP_001066979.1;Name=WP_001066979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=CCO34_RS17255;product=YjgN family protein;protein_id=WP_001066979.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 194762 195265 . + . ID=gene-CCO34_RS17260;Name=CCO34_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17260;old_locus_tag=CCO34_17255 NZ_NPMD01000007.1 Protein Homology CDS 194762 195265 . + 0 ID=cds-WP_001519079.1;Parent=gene-CCO34_RS17260;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=CCO34_RS17260;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 195372 195860 . + . ID=gene-CCO34_RS17265;Name=CCO34_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17265;old_locus_tag=CCO34_17260 NZ_NPMD01000007.1 Protein Homology CDS 195372 195860 . + 0 ID=cds-WP_000826193.1;Parent=gene-CCO34_RS17265;Dbxref=GenBank:WP_000826193.1;Name=WP_000826193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=CCO34_RS17265;product=DUF3617 domain-containing protein;protein_id=WP_000826193.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 196094 196906 . - . ID=gene-CCO34_RS17270;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=CCO34_RS17270;old_locus_tag=CCO34_17265 NZ_NPMD01000007.1 Protein Homology CDS 196094 196906 . - 0 ID=cds-WP_000218457.1;Parent=gene-CCO34_RS17270;Dbxref=GenBank:WP_000218457.1;Name=WP_000218457.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=CCO34_RS17270;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_000218457.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 196918 197334 . - . ID=gene-CCO34_RS17275;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=CCO34_RS17275;old_locus_tag=CCO34_17270 NZ_NPMD01000007.1 Protein Homology CDS 196918 197334 . - 0 ID=cds-WP_000002940.1;Parent=gene-CCO34_RS17275;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=CCO34_RS17275;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 197435 197530 . + . ID=gene-CCO34_RS26225;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=CCO34_RS26225 NZ_NPMD01000007.1 Protein Homology CDS 197435 197530 . + 0 ID=cds-WP_223148976.1;Parent=gene-CCO34_RS26225;Dbxref=GenBank:WP_223148976.1;Name=WP_223148976.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=CCO34_RS26225;product=putative translational regulatory protein ArgL;protein_id=WP_223148976.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 197500 198504 . + . ID=gene-CCO34_RS17280;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO34_RS17280;old_locus_tag=CCO34_17275 NZ_NPMD01000007.1 Protein Homology CDS 197500 198504 . + 0 ID=cds-WP_000103041.1;Parent=gene-CCO34_RS17280;Dbxref=GenBank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=CCO34_RS17280;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 198578 199030 . - . ID=gene-CCO34_RS17285;Name=CCO34_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17285;old_locus_tag=CCO34_17280 NZ_NPMD01000007.1 Protein Homology CDS 198578 199030 . - 0 ID=cds-WP_000583460.1;Parent=gene-CCO34_RS17285;Dbxref=GenBank:WP_000583460.1;Name=WP_000583460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=CCO34_RS17285;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000583460.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 199706 200926 . + . ID=gene-CCO34_RS17295;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO34_RS17295;old_locus_tag=CCO34_17290 NZ_NPMD01000007.1 Protein Homology CDS 199706 200926 . + 0 ID=cds-WP_000410840.1;Parent=gene-CCO34_RS17295;Dbxref=GenBank:WP_000410840.1;Name=WP_000410840.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=CCO34_RS17295;product=arginine deiminase;protein_id=WP_000410840.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 200937 201869 . + . ID=gene-CCO34_RS17300;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CCO34_RS17300;old_locus_tag=CCO34_17295 NZ_NPMD01000007.1 Protein Homology CDS 200937 201869 . + 0 ID=cds-WP_000428750.1;Parent=gene-CCO34_RS17300;Dbxref=GenBank:WP_000428750.1;Name=WP_000428750.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=CCO34_RS17300;product=carbamate kinase;protein_id=WP_000428750.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 201981 202985 . + . ID=gene-CCO34_RS17305;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO34_RS17305;old_locus_tag=CCO34_17300 NZ_NPMD01000007.1 Protein Homology CDS 201981 202985 . + 0 ID=cds-WP_000237031.1;Parent=gene-CCO34_RS17305;Dbxref=GenBank:WP_000237031.1;Name=WP_000237031.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=CCO34_RS17305;product=ornithine carbamoyltransferase;protein_id=WP_000237031.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 203041 204444 . + . ID=gene-CCO34_RS17310;Name=CCO34_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17310;old_locus_tag=CCO34_17305 NZ_NPMD01000007.1 Protein Homology CDS 203041 204444 . + 0 ID=cds-WP_000514424.1;Parent=gene-CCO34_RS17310;Dbxref=GenBank:WP_000514424.1;Name=WP_000514424.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=CCO34_RS17310;product=YfcC family protein;protein_id=WP_000514424.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 204631 205119 . + . ID=gene-CCO34_RS17315;Name=CCO34_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17315;old_locus_tag=CCO34_17310 NZ_NPMD01000007.1 Protein Homology CDS 204631 205119 . + 0 ID=cds-WP_000666051.1;Parent=gene-CCO34_RS17315;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=CCO34_RS17315;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11 NZ_NPMD01000007.1 RefSeq pseudogene 205089 205230 . - . ID=gene-CCO34_RS17320;Name=CCO34_RS17320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS17320;old_locus_tag=CCO34_17315;pseudo=true NZ_NPMD01000007.1 Protein Homology CDS 205089 205230 . - 0 ID=cds-CCO34_RS17320;Parent=gene-CCO34_RS17320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=CCO34_RS17320;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 205210 205311 . + . ID=gene-CCO34_RS17325;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=CCO34_RS17325;old_locus_tag=CCO34_17320 NZ_NPMD01000007.1 Protein Homology CDS 205210 205311 . + 0 ID=cds-WP_000249504.1;Parent=gene-CCO34_RS17325;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=CCO34_RS17325;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 205347 206282 . + . ID=gene-CCO34_RS17330;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=CCO34_RS17330;old_locus_tag=CCO34_17325 NZ_NPMD01000007.1 Protein Homology CDS 205347 206282 . + 0 ID=cds-WP_000013055.1;Parent=gene-CCO34_RS17330;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=CCO34_RS17330;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 206295 206756 . + . ID=gene-CCO34_RS17335;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=CCO34_RS17335;old_locus_tag=CCO34_17330 NZ_NPMD01000007.1 Protein Homology CDS 206295 206756 . + 0 ID=cds-WP_000148567.1;Parent=gene-CCO34_RS17335;Dbxref=GenBank:WP_000148567.1;Name=WP_000148567.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=CCO34_RS17335;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148567.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 206833 207219 . + . ID=gene-CCO34_RS17340;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=CCO34_RS17340;old_locus_tag=CCO34_17335 NZ_NPMD01000007.1 Protein Homology CDS 206833 207219 . + 0 ID=cds-WP_000047544.1;Parent=gene-CCO34_RS17340;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=CCO34_RS17340;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 207308 210016 . - . ID=gene-CCO34_RS17345;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO34_RS17345;old_locus_tag=CCO34_17340 NZ_NPMD01000007.1 Protein Homology CDS 207308 210016 . - 0 ID=cds-WP_000920867.1;Parent=gene-CCO34_RS17345;Dbxref=GenBank:WP_000920867.1;Name=WP_000920867.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=CCO34_RS17345;product=magnesium-translocating P-type ATPase;protein_id=WP_000920867.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 210157 210255 . - . ID=gene-CCO34_RS26230;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=CCO34_RS26230 NZ_NPMD01000007.1 Protein Homology CDS 210157 210255 . - 0 ID=cds-WP_105789234.1;Parent=gene-CCO34_RS26230;Dbxref=GenBank:WP_105789234.1;Name=WP_105789234.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=CCO34_RS26230;product=mgtA regulatory leader peptide MgtL;protein_id=WP_105789234.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 210400 211347 . + . ID=gene-CCO34_RS17350;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CCO34_RS17350;old_locus_tag=CCO34_17345 NZ_NPMD01000007.1 Protein Homology CDS 210400 211347 . + 0 ID=cds-WP_001181297.1;Parent=gene-CCO34_RS17350;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=CCO34_RS17350;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 211485 212903 . + . ID=gene-CCO34_RS17355;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=CCO34_RS17355;old_locus_tag=CCO34_17350 NZ_NPMD01000007.1 Protein Homology CDS 211485 212903 . + 0 ID=cds-WP_000048828.1;Parent=gene-CCO34_RS17355;Dbxref=GenBank:WP_000048828.1;Name=WP_000048828.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=CCO34_RS17355;product=PTS trehalose transporter subunit IIBC;protein_id=WP_000048828.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 212953 214605 . + . ID=gene-CCO34_RS17360;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CCO34_RS17360;old_locus_tag=CCO34_17355 NZ_NPMD01000007.1 Protein Homology CDS 212953 214605 . + 0 ID=cds-WP_000155046.1;Parent=gene-CCO34_RS17360;Dbxref=GenBank:WP_000155046.1;Name=WP_000155046.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=CCO34_RS17360;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_000155046.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 215014 217152 . + . ID=gene-CCO34_RS17365;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CCO34_RS17365;old_locus_tag=CCO34_17360 NZ_NPMD01000007.1 Protein Homology CDS 215014 217152 . + 0 ID=cds-WP_000187818.1;Parent=gene-CCO34_RS17365;Dbxref=GenBank:WP_000187818.1;Name=WP_000187818.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=CCO34_RS17365;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187818.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 217273 217737 . + . ID=gene-CCO34_RS17370;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CCO34_RS17370;old_locus_tag=CCO34_17365 NZ_NPMD01000007.1 Protein Homology CDS 217273 217737 . + 0 ID=cds-WP_001268861.1;Parent=gene-CCO34_RS17370;Dbxref=GenBank:WP_001268861.1;Name=WP_001268861.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=CCO34_RS17370;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001268861.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 217741 218025 . - . ID=gene-CCO34_RS17375;Name=CCO34_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17375;old_locus_tag=CCO34_17370 NZ_NPMD01000007.1 Protein Homology CDS 217741 218025 . - 0 ID=cds-WP_000220578.1;Parent=gene-CCO34_RS17375;Dbxref=GenBank:WP_000220578.1;Name=WP_000220578.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=CCO34_RS17375;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220578.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 218015 218257 . - . ID=gene-CCO34_RS17380;Name=CCO34_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17380;old_locus_tag=CCO34_17375 NZ_NPMD01000007.1 Protein Homology CDS 218015 218257 . - 0 ID=cds-WP_000212724.1;Parent=gene-CCO34_RS17380;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=CCO34_RS17380;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 218335 220248 . - . ID=gene-CCO34_RS17385;Name=CCO34_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17385;old_locus_tag=CCO34_17380 NZ_NPMD01000007.1 Protein Homology CDS 218335 220248 . - 0 ID=cds-WP_001212145.1;Parent=gene-CCO34_RS17385;Dbxref=GenBank:WP_001212145.1;Name=WP_001212145.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=CCO34_RS17385;product=BglG family transcription antiterminator;protein_id=WP_001212145.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 220265 221005 . - . ID=gene-CCO34_RS17390;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO34_RS17390;old_locus_tag=CCO34_17385 NZ_NPMD01000007.1 Protein Homology CDS 220265 221005 . - 0 ID=cds-WP_000779252.1;Parent=gene-CCO34_RS17390;Dbxref=GenBank:WP_000779252.1;Name=WP_000779252.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=CCO34_RS17390;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000779252.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 221002 222120 . - . ID=gene-CCO34_RS17395;Name=CCO34_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17395;old_locus_tag=CCO34_17390 NZ_NPMD01000007.1 Protein Homology CDS 221002 222120 . - 0 ID=cds-WP_001139194.1;Parent=gene-CCO34_RS17395;Dbxref=GenBank:WP_001139194.1;Name=WP_001139194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=CCO34_RS17395;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_001139194.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 222104 223237 . - . ID=gene-CCO34_RS17400;Name=CCO34_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17400;old_locus_tag=CCO34_17395 NZ_NPMD01000007.1 Protein Homology CDS 222104 223237 . - 0 ID=cds-WP_000459928.1;Parent=gene-CCO34_RS17400;Dbxref=GenBank:WP_000459928.1;Name=WP_000459928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=CCO34_RS17400;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_000459928.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 223296 223940 . - . ID=gene-CCO34_RS17405;Name=CCO34_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17405;old_locus_tag=CCO34_17400 NZ_NPMD01000007.1 Protein Homology CDS 223296 223940 . - 0 ID=cds-WP_000392128.1;Parent=gene-CCO34_RS17405;Dbxref=GenBank:WP_000392128.1;Name=WP_000392128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=CCO34_RS17405;product=DUF4310 family protein;protein_id=WP_000392128.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 223952 224728 . - . ID=gene-CCO34_RS17410;Name=CCO34_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17410;old_locus_tag=CCO34_17405 NZ_NPMD01000007.1 Protein Homology CDS 223952 224728 . - 0 ID=cds-WP_000478578.1;Parent=gene-CCO34_RS17410;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=CCO34_RS17410;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 224751 225053 . - . ID=gene-CCO34_RS17415;Name=CCO34_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17415;old_locus_tag=CCO34_17410 NZ_NPMD01000007.1 Protein Homology CDS 224751 225053 . - 0 ID=cds-WP_000975187.1;Parent=gene-CCO34_RS17415;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=CCO34_RS17415;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 225053 225415 . - . ID=gene-CCO34_RS17420;Name=CCO34_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17420;old_locus_tag=CCO34_17415 NZ_NPMD01000007.1 Protein Homology CDS 225053 225415 . - 0 ID=cds-WP_000435389.1;Parent=gene-CCO34_RS17420;Dbxref=GenBank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=CCO34_RS17420;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 225426 225764 . - . ID=gene-CCO34_RS17425;Name=CCO34_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17425;old_locus_tag=CCO34_17420 NZ_NPMD01000007.1 Protein Homology CDS 225426 225764 . - 0 ID=cds-WP_001255104.1;Parent=gene-CCO34_RS17425;Dbxref=GenBank:WP_001255104.1;Name=WP_001255104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=CCO34_RS17425;product=glycine dehydrogenase;protein_id=WP_001255104.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 226042 226428 . - . ID=gene-CCO34_RS17430;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=CCO34_RS17430;old_locus_tag=CCO34_17425 NZ_NPMD01000007.1 Protein Homology CDS 226042 226428 . - 0 ID=cds-WP_001232231.1;Parent=gene-CCO34_RS17430;Dbxref=GenBank:WP_001232231.1;Name=WP_001232231.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=CCO34_RS17430;product=cytochrome b562;protein_id=WP_001232231.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 226527 227879 . - . ID=gene-CCO34_RS17435;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=CCO34_RS17435;old_locus_tag=CCO34_17430 NZ_NPMD01000007.1 Protein Homology CDS 226527 227879 . - 0 ID=cds-WP_000852994.1;Parent=gene-CCO34_RS17435;Dbxref=GenBank:WP_000852994.1;Name=WP_000852994.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=CCO34_RS17435;product=metalloprotease PmbA;protein_id=WP_000852994.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 227975 228526 . + . ID=gene-CCO34_RS17440;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=CCO34_RS17440;old_locus_tag=CCO34_17435 NZ_NPMD01000007.1 Protein Homology CDS 227975 228526 . + 0 ID=cds-WP_000166287.1;Parent=gene-CCO34_RS17440;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=CCO34_RS17440;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 228582 229466 . - . ID=gene-CCO34_RS17445;Name=iolH;gbkey=Gene;gene=iolH;gene_biotype=protein_coding;locus_tag=CCO34_RS17445;old_locus_tag=CCO34_17440 NZ_NPMD01000007.1 Protein Homology CDS 228582 229466 . - 0 ID=cds-WP_000683955.1;Parent=gene-CCO34_RS17445;Dbxref=GenBank:WP_000683955.1;Name=WP_000683955.1;gbkey=CDS;gene=iolH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463297.1;locus_tag=CCO34_RS17445;product=sugar phosphate isomerase/epimerase IolH;protein_id=WP_000683955.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 229519 230334 . - . ID=gene-CCO34_RS17450;Name=iolI2;gbkey=Gene;gene=iolI2;gene_biotype=protein_coding;locus_tag=CCO34_RS17450;old_locus_tag=CCO34_17445 NZ_NPMD01000007.1 Protein Homology CDS 229519 230334 . - 0 ID=cds-WP_001019384.1;Parent=gene-CCO34_RS17450;Dbxref=GenBank:WP_001019384.1;Name=WP_001019384.1;gbkey=CDS;gene=iolI2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463296.1;locus_tag=CCO34_RS17450;product=2-keto-myo-inositol isomerase IolI2;protein_id=WP_001019384.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 230495 231721 . - . ID=gene-CCO34_RS17455;Name=CCO34_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17455;old_locus_tag=CCO34_17450 NZ_NPMD01000007.1 Protein Homology CDS 230495 231721 . - 0 ID=cds-WP_000661786.1;Parent=gene-CCO34_RS17455;Dbxref=GenBank:WP_000661786.1;Name=WP_000661786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463295.1;locus_tag=CCO34_RS17455;product=MFS transporter;protein_id=WP_000661786.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 231794 232816 . - . ID=gene-CCO34_RS17460;Name=iolG2;gbkey=Gene;gene=iolG2;gene_biotype=protein_coding;locus_tag=CCO34_RS17460;old_locus_tag=CCO34_17455 NZ_NPMD01000007.1 Protein Homology CDS 231794 232816 . - 0 ID=cds-WP_000736098.1;Parent=gene-CCO34_RS17460;Dbxref=GenBank:WP_000736098.1;Name=WP_000736098.1;gbkey=CDS;gene=iolG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=CCO34_RS17460;product=D-chiro-inositol-2-dehydrogenase IolG2;protein_id=WP_000736098.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 232997 234937 . - . ID=gene-CCO34_RS17465;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=CCO34_RS17465;old_locus_tag=CCO34_17460 NZ_NPMD01000007.1 Protein Homology CDS 232997 234937 . - 0 ID=cds-WP_000849477.1;Parent=gene-CCO34_RS17465;Dbxref=GenBank:WP_000849477.1;Name=WP_000849477.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453702.1;locus_tag=CCO34_RS17465;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_000849477.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 235354 237291 . + . ID=gene-CCO34_RS17470;Name=CCO34_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17470;old_locus_tag=CCO34_17465 NZ_NPMD01000007.1 Protein Homology CDS 235354 237291 . + 0 ID=cds-WP_077906067.1;Parent=gene-CCO34_RS17470;Dbxref=GenBank:WP_077906067.1;Name=WP_077906067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453701.1;locus_tag=CCO34_RS17470;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_077906067.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 237352 238518 . + . ID=gene-CCO34_RS17475;Name=CCO34_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17475;old_locus_tag=CCO34_17470 NZ_NPMD01000007.1 Protein Homology CDS 237352 238518 . + 0 ID=cds-WP_001111174.1;Parent=gene-CCO34_RS17475;Dbxref=GenBank:WP_001111174.1;Name=WP_001111174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=CCO34_RS17475;product=MFS transporter;protein_id=WP_001111174.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 238515 239348 . - . ID=gene-CCO34_RS17480;Name=iolI1;gbkey=Gene;gene=iolI1;gene_biotype=protein_coding;locus_tag=CCO34_RS17480;old_locus_tag=CCO34_17475 NZ_NPMD01000007.1 Protein Homology CDS 238515 239348 . - 0 ID=cds-WP_000976929.1;Parent=gene-CCO34_RS17480;Dbxref=GenBank:WP_000976929.1;Name=WP_000976929.1;gbkey=CDS;gene=iolI1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463288.1;locus_tag=CCO34_RS17480;product=2-keto-myo-inositol isomerase IolI1;protein_id=WP_000976929.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 239349 240692 . - . ID=gene-CCO34_RS17485;Name=srfJ;gbkey=Gene;gene=srfJ;gene_biotype=protein_coding;locus_tag=CCO34_RS17485;old_locus_tag=CCO34_17480 NZ_NPMD01000007.1 Protein Homology CDS 239349 240692 . - 0 ID=cds-WP_000678386.1;Parent=gene-CCO34_RS17485;Dbxref=GenBank:WP_000678386.1;Name=WP_000678386.1;gbkey=CDS;gene=srfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463287.1;locus_tag=CCO34_RS17485;product=lysosomal glucosyl ceramidase-like type III secretion effector SrfJ;protein_id=WP_000678386.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 240789 241799 . - . ID=gene-CCO34_RS17490;Name=iolG1;gbkey=Gene;gene=iolG1;gene_biotype=protein_coding;locus_tag=CCO34_RS17490;old_locus_tag=CCO34_17485 NZ_NPMD01000007.1 Protein Homology CDS 240789 241799 . - 0 ID=cds-WP_000172704.1;Parent=gene-CCO34_RS17490;Dbxref=GenBank:WP_000172704.1;Name=WP_000172704.1;gbkey=CDS;gene=iolG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463286.1;locus_tag=CCO34_RS17490;product=inositol 2-dehydrogenase IolG1;protein_id=WP_000172704.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 241818 242738 . - . ID=gene-CCO34_RS17495;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=CCO34_RS17495;old_locus_tag=CCO34_17490 NZ_NPMD01000007.1 Protein Homology CDS 241818 242738 . - 0 ID=cds-WP_012601329.1;Parent=gene-CCO34_RS17495;Dbxref=GenBank:WP_012601329.1;Name=WP_012601329.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463285.3;locus_tag=CCO34_RS17495;product=myo-inosose-2 dehydratase;protein_id=WP_012601329.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 242998 243822 . - . ID=gene-CCO34_RS17500;Name=reiD;gbkey=Gene;gene=reiD;gene_biotype=protein_coding;locus_tag=CCO34_RS17500;old_locus_tag=CCO34_17495 NZ_NPMD01000007.1 Protein Homology CDS 242998 243822 . - 0 ID=cds-WP_000332219.1;Parent=gene-CCO34_RS17500;Dbxref=GenBank:WP_000332219.1;Name=WP_000332219.1;gbkey=CDS;gene=reiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332219.1;locus_tag=CCO34_RS17500;product=myo-inositol utilization transcriptional regulator ReiD;protein_id=WP_000332219.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 243945 244247 . + . ID=gene-CCO34_RS17505;Name=CCO34_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17505;old_locus_tag=CCO34_17500 NZ_NPMD01000007.1 Protein Homology CDS 243945 244247 . + 0 ID=cds-WP_071532969.1;Parent=gene-CCO34_RS17505;Dbxref=GenBank:WP_071532969.1;Name=WP_071532969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=CCO34_RS17505;product=hypothetical protein;protein_id=WP_071532969.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 244263 245768 . + . ID=gene-CCO34_RS17510;Name=iolA;gbkey=Gene;gene=iolA;gene_biotype=protein_coding;locus_tag=CCO34_RS17510;old_locus_tag=CCO34_17505 NZ_NPMD01000007.1 Protein Homology CDS 244263 245768 . + 0 ID=cds-WP_000450730.1;Parent=gene-CCO34_RS17510;Dbxref=GenBank:WP_000450730.1;Name=WP_000450730.1;gbkey=CDS;gene=iolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=CCO34_RS17510;product=malonate-semialdehyde dehydrogenase IolA;protein_id=WP_000450730.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 245793 246602 . + . ID=gene-CCO34_RS17515;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=CCO34_RS17515;old_locus_tag=CCO34_17510 NZ_NPMD01000007.1 Protein Homology CDS 245793 246602 . + 0 ID=cds-WP_000002010.1;Parent=gene-CCO34_RS17515;Dbxref=GenBank:WP_000002010.1;Name=WP_000002010.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463281.1;locus_tag=CCO34_RS17515;product=5-deoxy-glucuronate isomerase;protein_id=WP_000002010.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 246955 248391 . - . ID=gene-CCO34_RS17520;Name=iolT2;gbkey=Gene;gene=iolT2;gene_biotype=protein_coding;locus_tag=CCO34_RS17520;old_locus_tag=CCO34_17515 NZ_NPMD01000007.1 Protein Homology CDS 246955 248391 . - 0 ID=cds-WP_000083108.1;Parent=gene-CCO34_RS17520;Dbxref=GenBank:WP_000083108.1;Name=WP_000083108.1;gbkey=CDS;gene=iolT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463280.1;locus_tag=CCO34_RS17520;product=myo-inositol import MFS transporter IolT2;protein_id=WP_000083108.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 248428 248622 . + . ID=gene-CCO34_RS17525;Name=CCO34_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17525;old_locus_tag=CCO34_17520 NZ_NPMD01000007.1 GeneMarkS-2+ CDS 248428 248622 . + 0 ID=cds-WP_000667714.1;Parent=gene-CCO34_RS17525;Dbxref=GenBank:WP_000667714.1;Name=WP_000667714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS17525;product=hypothetical protein;protein_id=WP_000667714.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 248850 250283 . + . ID=gene-CCO34_RS17530;Name=iolT1;gbkey=Gene;gene=iolT1;gene_biotype=protein_coding;locus_tag=CCO34_RS17530;old_locus_tag=CCO34_17525 NZ_NPMD01000007.1 Protein Homology CDS 248850 250283 . + 0 ID=cds-WP_000107710.1;Parent=gene-CCO34_RS17530;Dbxref=GenBank:WP_000107710.1;Name=WP_000107710.1;gbkey=CDS;gene=iolT1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=CCO34_RS17530;product=myo-inositol import MFS transporter IolT1;protein_id=WP_000107710.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 250334 251167 . - . ID=gene-CCO34_RS17535;Name=iolR;gbkey=Gene;gene=iolR;gene_biotype=protein_coding;locus_tag=CCO34_RS17535;old_locus_tag=CCO34_17530 NZ_NPMD01000007.1 Protein Homology CDS 250334 251167 . - 0 ID=cds-WP_000033840.1;Parent=gene-CCO34_RS17535;Dbxref=GenBank:WP_000033840.1;Name=WP_000033840.1;gbkey=CDS;gene=iolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463278.1;locus_tag=CCO34_RS17535;product=myo-inositol utilization transcriptional regulator IolR;protein_id=WP_000033840.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 251658 253037 . - . ID=gene-CCO34_RS17545;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=CCO34_RS17545;old_locus_tag=CCO34_17540 NZ_NPMD01000007.1 Protein Homology CDS 251658 253037 . - 0 ID=cds-WP_001219825.1;Parent=gene-CCO34_RS17545;Dbxref=GenBank:WP_001219825.1;Name=WP_001219825.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463277.1;locus_tag=CCO34_RS17545;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219825.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 253212 254210 . + . ID=gene-CCO34_RS17550;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=CCO34_RS17550;old_locus_tag=CCO34_17545 NZ_NPMD01000007.1 Protein Homology CDS 253212 254210 . + 0 ID=cds-WP_000853764.1;Parent=gene-CCO34_RS17550;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=CCO34_RS17550;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 254437 254967 . + . ID=gene-CCO34_RS17555;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=CCO34_RS17555;old_locus_tag=CCO34_17550 NZ_NPMD01000007.1 Protein Homology CDS 254437 254967 . + 0 ID=cds-WP_000055079.1;Parent=gene-CCO34_RS17555;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=CCO34_RS17555;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 255377 256540 . + . ID=gene-CCO34_RS17560;Name=CCO34_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17560;old_locus_tag=CCO34_17555 NZ_NPMD01000007.1 Protein Homology CDS 255377 256540 . + 0 ID=cds-WP_000977209.1;Parent=gene-CCO34_RS17560;Dbxref=GenBank:WP_000977209.1;Name=WP_000977209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=CCO34_RS17560;product=metallo-dependent hydrolase;protein_id=WP_000977209.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 256537 257745 . + . ID=gene-CCO34_RS17565;Name=CCO34_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17565;old_locus_tag=CCO34_17560 NZ_NPMD01000007.1 Protein Homology CDS 256537 257745 . + 0 ID=cds-WP_000203135.1;Parent=gene-CCO34_RS17565;Dbxref=GenBank:WP_000203135.1;Name=WP_000203135.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=CCO34_RS17565;product=MFS transporter;protein_id=WP_000203135.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 257882 258877 . - . ID=gene-CCO34_RS17570;Name=CCO34_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17570;old_locus_tag=CCO34_17565 NZ_NPMD01000007.1 Protein Homology CDS 257882 258877 . - 0 ID=cds-WP_001372721.1;Parent=gene-CCO34_RS17570;Dbxref=GenBank:WP_001372721.1;Name=WP_001372721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001372721.1;locus_tag=CCO34_RS17570;product=phage integrase;protein_id=WP_001372721.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 258944 259237 . - . ID=gene-CCO34_RS17575;Name=CCO34_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17575;old_locus_tag=CCO34_17570 NZ_NPMD01000007.1 Protein Homology CDS 258944 259237 . - 0 ID=cds-WP_057698144.1;Parent=gene-CCO34_RS17575;Dbxref=GenBank:WP_057698144.1;Name=WP_057698144.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519230.1;locus_tag=CCO34_RS17575;product=helix-turn-helix transcriptional regulator;protein_id=WP_057698144.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 259352 259777 . + . ID=gene-CCO34_RS17580;Name=CCO34_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17580;old_locus_tag=CCO34_17575 NZ_NPMD01000007.1 Protein Homology CDS 259352 259777 . + 0 ID=cds-WP_094965480.1;Parent=gene-CCO34_RS17580;Dbxref=GenBank:WP_094965480.1;Name=WP_094965480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001561239.1;locus_tag=CCO34_RS17580;product=Cox family DNA-binding protein;protein_id=WP_094965480.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 259882 260289 . + . ID=gene-CCO34_RS17585;Name=CCO34_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17585;old_locus_tag=CCO34_17580 NZ_NPMD01000007.1 GeneMarkS-2+ CDS 259882 260289 . + 0 ID=cds-WP_237585406.1;Parent=gene-CCO34_RS17585;Dbxref=GenBank:WP_237585406.1;Name=WP_237585406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS17585;product=hypothetical protein;protein_id=WP_237585406.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 260290 260472 . - . ID=gene-CCO34_RS17590;Name=CCO34_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17590;old_locus_tag=CCO34_17585 NZ_NPMD01000007.1 GeneMarkS-2+ CDS 260290 260472 . - 0 ID=cds-WP_094965482.1;Parent=gene-CCO34_RS17590;Dbxref=GenBank:WP_094965482.1;Name=WP_094965482.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS17590;product=hypothetical protein;protein_id=WP_094965482.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 260614 260964 . + . ID=gene-CCO34_RS17595;Name=CCO34_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17595;old_locus_tag=CCO34_17590 NZ_NPMD01000007.1 Protein Homology CDS 260614 260964 . + 0 ID=cds-WP_094965483.1;Parent=gene-CCO34_RS17595;Dbxref=GenBank:WP_094965483.1;Name=WP_094965483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813102.1;locus_tag=CCO34_RS17595;product=DUF4761 family protein;protein_id=WP_094965483.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 260975 261253 . + . ID=gene-CCO34_RS17600;Name=CCO34_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17600;old_locus_tag=CCO34_17595 NZ_NPMD01000007.1 Protein Homology CDS 260975 261253 . + 0 ID=cds-WP_094965484.1;Parent=gene-CCO34_RS17600;Dbxref=GenBank:WP_094965484.1;Name=WP_094965484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310651.1;locus_tag=CCO34_RS17600;product=hypothetical protein;protein_id=WP_094965484.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 261265 261507 . + . ID=gene-CCO34_RS17605;Name=CCO34_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17605;old_locus_tag=CCO34_17600 NZ_NPMD01000007.1 Protein Homology CDS 261265 261507 . + 0 ID=cds-WP_080171539.1;Parent=gene-CCO34_RS17605;Dbxref=GenBank:WP_080171539.1;Name=WP_080171539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310652.1;locus_tag=CCO34_RS17605;product=DUF4754 family protein;protein_id=WP_080171539.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 261504 261617 . + . ID=gene-CCO34_RS25370;Name=CCO34_RS25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25370 NZ_NPMD01000007.1 Protein Homology CDS 261504 261617 . + 0 ID=cds-WP_139782308.1;Parent=gene-CCO34_RS25370;Dbxref=GenBank:WP_139782308.1;Name=WP_139782308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519659.1;locus_tag=CCO34_RS25370;product=hypothetical protein;protein_id=WP_139782308.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 261710 262078 . + . ID=gene-CCO34_RS17610;Name=CCO34_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17610;old_locus_tag=CCO34_17605 NZ_NPMD01000007.1 Protein Homology CDS 261710 262078 . + 0 ID=cds-WP_094965485.1;Parent=gene-CCO34_RS17610;Dbxref=GenBank:WP_094965485.1;Name=WP_094965485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001560995.1;locus_tag=CCO34_RS17610;product=hypothetical protein;protein_id=WP_094965485.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 262090 262422 . + . ID=gene-CCO34_RS17615;Name=CCO34_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17615;old_locus_tag=CCO34_17610 NZ_NPMD01000007.1 Protein Homology CDS 262090 262422 . + 0 ID=cds-WP_080171537.1;Parent=gene-CCO34_RS17615;Dbxref=GenBank:WP_080171537.1;Name=WP_080171537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413220.1;locus_tag=CCO34_RS17615;product=hypothetical protein;protein_id=WP_080171537.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 262422 262625 . + . ID=gene-CCO34_RS17620;Name=CCO34_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17620;old_locus_tag=CCO34_17615 NZ_NPMD01000007.1 Protein Homology CDS 262422 262625 . + 0 ID=cds-WP_094965486.1;Parent=gene-CCO34_RS17620;Dbxref=GenBank:WP_094965486.1;Name=WP_094965486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310654.1;locus_tag=CCO34_RS17620;product=hypothetical protein;protein_id=WP_094965486.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 262622 262867 . + . ID=gene-CCO34_RS17625;Name=CCO34_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17625;old_locus_tag=CCO34_17620 NZ_NPMD01000007.1 Protein Homology CDS 262622 262867 . + 0 ID=cds-WP_000153674.1;Parent=gene-CCO34_RS17625;Dbxref=GenBank:WP_000153674.1;Name=WP_000153674.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310655.1;locus_tag=CCO34_RS17625;product=MarR family transcriptional regulator;protein_id=WP_000153674.1;transl_table=11 NZ_NPMD01000007.1 RefSeq pseudogene 262864 262957 . + . ID=gene-CCO34_RS26235;Name=CCO34_RS26235;end_range=262957,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26235;partial=true;pseudo=true NZ_NPMD01000007.1 Protein Homology CDS 262864 262957 . + 0 ID=cds-CCO34_RS26235;Parent=gene-CCO34_RS26235;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=262957,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108349.1;locus_tag=CCO34_RS26235;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000007.1 RefSeq pseudogene 263089 263184 . + . ID=gene-CCO34_RS26240;Name=CCO34_RS26240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26240;partial=true;pseudo=true;start_range=.,263089 NZ_NPMD01000007.1 Protein Homology CDS 263089 263184 . + 0 ID=cds-CCO34_RS26240;Parent=gene-CCO34_RS26240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310656.1;locus_tag=CCO34_RS26240;partial=true;product=hypothetical protein;pseudo=true;start_range=.,263089;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 263196 263342 . + . ID=gene-CCO34_RS25575;Name=CCO34_RS25575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25575;old_locus_tag=CCO34_17630 NZ_NPMD01000007.1 Protein Homology CDS 263196 263342 . + 0 ID=cds-WP_094965487.1;Parent=gene-CCO34_RS25575;Dbxref=GenBank:WP_094965487.1;Name=WP_094965487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030144.1;locus_tag=CCO34_RS25575;product=hypothetical protein;protein_id=WP_094965487.1;transl_table=11 NZ_NPMD01000007.1 RefSeq pseudogene 263369 263629 . + . ID=gene-CCO34_RS25855;Name=CCO34_RS25855;end_range=263629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25855;partial=true;pseudo=true NZ_NPMD01000007.1 Protein Homology CDS 263369 263629 . + 0 ID=cds-CCO34_RS25855;Parent=gene-CCO34_RS25855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=263629,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.6;locus_tag=CCO34_RS25855;partial=true;product=ash family protein;pseudo=true;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 263680 263910 . + . ID=gene-CCO34_RS25860;Name=CCO34_RS25860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25860;old_locus_tag=CCO34_17635 NZ_NPMD01000007.1 Protein Homology CDS 263680 263910 . + 0 ID=cds-WP_080171534.1;Parent=gene-CCO34_RS25860;Dbxref=GenBank:WP_080171534.1;Name=WP_080171534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310658.1;locus_tag=CCO34_RS25860;product=derepression protein;protein_id=WP_080171534.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 263983 264348 . + . ID=gene-CCO34_RS17645;Name=CCO34_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17645;old_locus_tag=CCO34_17640 NZ_NPMD01000007.1 GeneMarkS-2+ CDS 263983 264348 . + 0 ID=cds-WP_080171533.1;Parent=gene-CCO34_RS17645;Dbxref=GenBank:WP_080171533.1;Name=WP_080171533.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS17645;product=hypothetical protein;protein_id=WP_080171533.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 264355 266973 . + . ID=gene-CCO34_RS17650;Name=CCO34_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17650;old_locus_tag=CCO34_17645 NZ_NPMD01000007.1 Protein Homology CDS 264355 266973 . + 0 ID=cds-WP_094965489.1;Parent=gene-CCO34_RS17650;Dbxref=GenBank:WP_094965489.1;Name=WP_094965489.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356139.1;locus_tag=CCO34_RS17650;product=replication endonuclease;protein_id=WP_094965489.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 266970 267398 . + . ID=gene-CCO34_RS17655;Name=CCO34_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17655;old_locus_tag=CCO34_17650 NZ_NPMD01000007.1 GeneMarkS-2+ CDS 266970 267398 . + 0 ID=cds-WP_080171531.1;Parent=gene-CCO34_RS17655;Dbxref=GenBank:WP_080171531.1;Name=WP_080171531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS17655;product=hypothetical protein;protein_id=WP_080171531.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 267513 268472 . + . ID=gene-CCO34_RS17660;Name=CCO34_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17660;old_locus_tag=CCO34_17655 NZ_NPMD01000007.1 Protein Homology CDS 267513 268472 . + 0 ID=cds-WP_094965490.1;Parent=gene-CCO34_RS17660;Dbxref=GenBank:WP_094965490.1;Name=WP_094965490.1;Ontology_term=GO:0030541,GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;go_process=plasmid partitioning|0030541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310661.1;locus_tag=CCO34_RS17660;product=plasmid segregation protein ParM;protein_id=WP_094965490.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 268476 268790 . + . ID=gene-CCO34_RS17665;Name=CCO34_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17665;old_locus_tag=CCO34_17660 NZ_NPMD01000007.1 Protein Homology CDS 268476 268790 . + 0 ID=cds-WP_080171529.1;Parent=gene-CCO34_RS17665;Dbxref=GenBank:WP_080171529.1;Name=WP_080171529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211287.1;locus_tag=CCO34_RS17665;product=plasmid partitioning/stability family protein;protein_id=WP_080171529.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 269101 269379 . + . ID=gene-CCO34_RS17670;Name=CCO34_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17670;old_locus_tag=CCO34_17665 NZ_NPMD01000007.1 Protein Homology CDS 269101 269379 . + 0 ID=cds-WP_080171528.1;Parent=gene-CCO34_RS17670;Dbxref=GenBank:WP_080171528.1;Name=WP_080171528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511534.1;locus_tag=CCO34_RS17670;product=hypothetical protein;protein_id=WP_080171528.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 269446 269733 . + . ID=gene-CCO34_RS17675;Name=CCO34_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17675;old_locus_tag=CCO34_17670 NZ_NPMD01000007.1 Protein Homology CDS 269446 269733 . + 0 ID=cds-WP_080171527.1;Parent=gene-CCO34_RS17675;Dbxref=GenBank:WP_080171527.1;Name=WP_080171527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001376620.1;locus_tag=CCO34_RS17675;product=hypothetical protein;protein_id=WP_080171527.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 270035 270664 . - . ID=gene-CCO34_RS17680;Name=CCO34_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17680;old_locus_tag=CCO34_17675 NZ_NPMD01000007.1 Protein Homology CDS 270035 270664 . - 0 ID=cds-WP_080171526.1;Parent=gene-CCO34_RS17680;Dbxref=GenBank:WP_080171526.1;Name=WP_080171526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460689.1;locus_tag=CCO34_RS17680;product=hypothetical protein;protein_id=WP_080171526.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 270689 270946 . - . ID=gene-CCO34_RS17685;Name=CCO34_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17685;old_locus_tag=CCO34_17680 NZ_NPMD01000007.1 Protein Homology CDS 270689 270946 . - 0 ID=cds-WP_237585407.1;Parent=gene-CCO34_RS17685;Dbxref=GenBank:WP_237585407.1;Name=WP_237585407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254197.1;locus_tag=CCO34_RS17685;product=ogr/Delta-like zinc finger family protein;protein_id=WP_237585407.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 271012 272046 . - . ID=gene-CCO34_RS17690;Name=CCO34_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17690;old_locus_tag=CCO34_17685 NZ_NPMD01000007.1 Protein Homology CDS 271012 272046 . - 0 ID=cds-WP_094965492.1;Parent=gene-CCO34_RS17690;Dbxref=GenBank:WP_094965492.1;Name=WP_094965492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038285.1;locus_tag=CCO34_RS17690;product=phage portal protein;protein_id=WP_094965492.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 272039 273826 . - . ID=gene-CCO34_RS17695;Name=CCO34_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17695;old_locus_tag=CCO34_17690 NZ_NPMD01000007.1 Protein Homology CDS 272039 273826 . - 0 ID=cds-WP_094965493.1;Parent=gene-CCO34_RS17695;Dbxref=GenBank:WP_094965493.1;Name=WP_094965493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331668.1;locus_tag=CCO34_RS17695;product=terminase large subunit domain-containing protein;protein_id=WP_094965493.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 274019 274930 . + . ID=gene-CCO34_RS17700;Name=CCO34_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17700;old_locus_tag=CCO34_17695 NZ_NPMD01000007.1 Protein Homology CDS 274019 274930 . + 0 ID=cds-WP_094965494.1;Parent=gene-CCO34_RS17700;Dbxref=GenBank:WP_094965494.1;Name=WP_094965494.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040311.1;locus_tag=CCO34_RS17700;product=GPO family capsid scaffolding protein;protein_id=WP_094965494.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 274945 275958 . + . ID=gene-CCO34_RS17705;Name=CCO34_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17705;old_locus_tag=CCO34_17700 NZ_NPMD01000007.1 Protein Homology CDS 274945 275958 . + 0 ID=cds-WP_080171522.1;Parent=gene-CCO34_RS17705;Dbxref=GenBank:WP_080171522.1;Name=WP_080171522.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001057495.1;locus_tag=CCO34_RS17705;product=phage major capsid protein%2C P2 family;protein_id=WP_080171522.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 275976 276686 . + . ID=gene-CCO34_RS17710;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=CCO34_RS17710;old_locus_tag=CCO34_17705 NZ_NPMD01000007.1 Protein Homology CDS 275976 276686 . + 0 ID=cds-WP_094965495.1;Parent=gene-CCO34_RS17710;Dbxref=GenBank:WP_094965495.1;Name=WP_094965495.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353014.1;locus_tag=CCO34_RS17710;product=phage terminase small subunit;protein_id=WP_094965495.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 276785 277279 . + . ID=gene-CCO34_RS17715;Name=CCO34_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17715;old_locus_tag=CCO34_17710 NZ_NPMD01000007.1 Protein Homology CDS 276785 277279 . + 0 ID=cds-WP_000459490.1;Parent=gene-CCO34_RS17715;Dbxref=GenBank:WP_000459490.1;Name=WP_000459490.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459494.1;locus_tag=CCO34_RS17715;product=head completion/stabilization protein;protein_id=WP_000459490.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 277289 277762 . + . ID=gene-CCO34_RS17720;Name=CCO34_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17720;old_locus_tag=CCO34_17715 NZ_NPMD01000007.1 Protein Homology CDS 277289 277762 . + 0 ID=cds-WP_080171520.1;Parent=gene-CCO34_RS17720;Dbxref=GenBank:WP_080171520.1;Name=WP_080171520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392841.1;locus_tag=CCO34_RS17720;product=phage tail protein;protein_id=WP_080171520.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 277759 278472 . + . ID=gene-CCO34_RS17725;Name=CCO34_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17725;old_locus_tag=CCO34_17720 NZ_NPMD01000007.1 Protein Homology CDS 277759 278472 . + 0 ID=cds-WP_080171519.1;Parent=gene-CCO34_RS17725;Dbxref=GenBank:WP_080171519.1;Name=WP_080171519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197974.1;locus_tag=CCO34_RS17725;product=phage virion morphogenesis protein;protein_id=WP_080171519.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 278492 279640 . + . ID=gene-CCO34_RS17730;Name=CCO34_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17730;old_locus_tag=CCO34_17725 NZ_NPMD01000007.1 Protein Homology CDS 278492 279640 . + 0 ID=cds-WP_080171518.1;Parent=gene-CCO34_RS17730;Dbxref=GenBank:WP_080171518.1;Name=WP_080171518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220196.1;locus_tag=CCO34_RS17730;product=DUF2586 domain-containing protein;protein_id=WP_080171518.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 279637 280092 . + . ID=gene-CCO34_RS17735;Name=CCO34_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17735;old_locus_tag=CCO34_17730 NZ_NPMD01000007.1 Protein Homology CDS 279637 280092 . + 0 ID=cds-WP_080171517.1;Parent=gene-CCO34_RS17735;Dbxref=GenBank:WP_080171517.1;Name=WP_080171517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213187.1;locus_tag=CCO34_RS17735;product=phage protein;protein_id=WP_080171517.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 280096 280392 . + . ID=gene-CCO34_RS17740;Name=CCO34_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17740;old_locus_tag=CCO34_17735 NZ_NPMD01000007.1 Protein Homology CDS 280096 280392 . + 0 ID=cds-WP_080171516.1;Parent=gene-CCO34_RS17740;Dbxref=GenBank:WP_080171516.1;Name=WP_080171516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001155242.1;locus_tag=CCO34_RS17740;product=phage holin family protein;protein_id=WP_080171516.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 280502 280843 . + . ID=gene-CCO34_RS17745;Name=CCO34_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17745;old_locus_tag=CCO34_17740 NZ_NPMD01000007.1 Protein Homology CDS 280502 280843 . + 0 ID=cds-WP_080171515.1;Parent=gene-CCO34_RS17745;Dbxref=GenBank:WP_080171515.1;Name=WP_080171515.1;Ontology_term=GO:0006508,GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007710822.1;locus_tag=CCO34_RS17745;product=M15 family metallopeptidase;protein_id=WP_080171515.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 280914 281201 . + . ID=gene-CCO34_RS17750;Name=CCO34_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17750;old_locus_tag=CCO34_17745 NZ_NPMD01000007.1 Protein Homology CDS 280914 281201 . + 0 ID=cds-WP_021580194.1;Parent=gene-CCO34_RS17750;Dbxref=GenBank:WP_021580194.1;Name=WP_021580194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998379.1;locus_tag=CCO34_RS17750;product=putative phage tail assembly chaperone;protein_id=WP_021580194.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 281243 281389 . + . ID=gene-CCO34_RS25580;Name=CCO34_RS25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25580 NZ_NPMD01000007.1 Protein Homology CDS 281243 281389 . + 0 ID=cds-WP_176210925.1;Parent=gene-CCO34_RS25580;Dbxref=GenBank:WP_176210925.1;Name=WP_176210925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000906384.1;locus_tag=CCO34_RS25580;product=DUF6890 family protein;protein_id=WP_176210925.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 281389 283485 . + . ID=gene-CCO34_RS17755;Name=CCO34_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17755;old_locus_tag=CCO34_17750 NZ_NPMD01000007.1 Protein Homology CDS 281389 283485 . + 0 ID=cds-WP_094965496.1;Parent=gene-CCO34_RS17755;Dbxref=GenBank:WP_094965496.1;Name=WP_094965496.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000082776.1;locus_tag=CCO34_RS17755;product=phage tail tape measure protein;protein_id=WP_094965496.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 283475 283825 . + . ID=gene-CCO34_RS17760;Name=CCO34_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17760;old_locus_tag=CCO34_17755 NZ_NPMD01000007.1 Protein Homology CDS 283475 283825 . + 0 ID=cds-WP_094965498.1;Parent=gene-CCO34_RS17760;Dbxref=GenBank:WP_094965498.1;Name=WP_094965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556622.1;locus_tag=CCO34_RS17760;product=DUF2590 family protein;protein_id=WP_094965498.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 283818 285002 . + . ID=gene-CCO34_RS17765;Name=CCO34_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17765;old_locus_tag=CCO34_17760 NZ_NPMD01000007.1 Protein Homology CDS 283818 285002 . + 0 ID=cds-WP_094965499.1;Parent=gene-CCO34_RS17765;Dbxref=GenBank:WP_094965499.1;Name=WP_094965499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606950.1;locus_tag=CCO34_RS17765;product=baseplate J/gp47 family protein;protein_id=WP_094965499.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 284999 285634 . + . ID=gene-CCO34_RS17770;Name=CCO34_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17770;old_locus_tag=CCO34_17765 NZ_NPMD01000007.1 Protein Homology CDS 284999 285634 . + 0 ID=cds-WP_080171511.1;Parent=gene-CCO34_RS17770;Dbxref=GenBank:WP_080171511.1;Name=WP_080171511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775222.1;locus_tag=CCO34_RS17770;product=phage tail protein;protein_id=WP_080171511.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 285631 287397 . + . ID=gene-CCO34_RS17775;Name=CCO34_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17775;old_locus_tag=CCO34_17770 NZ_NPMD01000007.1 Protein Homology CDS 285631 287397 . + 0 ID=cds-WP_094965500.1;Parent=gene-CCO34_RS17775;Dbxref=GenBank:WP_094965500.1;Name=WP_094965500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104016.1;locus_tag=CCO34_RS17775;product=phage tail protein;protein_id=WP_094965500.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 287400 287957 . + . ID=gene-CCO34_RS17780;Name=CCO34_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17780;old_locus_tag=CCO34_17775 NZ_NPMD01000007.1 Protein Homology CDS 287400 287957 . + 0 ID=cds-WP_094965502.1;Parent=gene-CCO34_RS17780;Dbxref=GenBank:WP_094965502.1;Name=WP_094965502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000902866.1;locus_tag=CCO34_RS17780;product=tail fiber assembly protein;protein_id=WP_094965502.1;transl_table=11 NZ_NPMD01000007.1 RefSeq gene 287957 288977 . + . ID=gene-CCO34_RS17785;Name=CCO34_RS17785;end_range=288977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17785;old_locus_tag=CCO34_17780;partial=true NZ_NPMD01000007.1 Protein Homology CDS 287957 288977 . + 0 ID=cds-WP_176452909.1;Parent=gene-CCO34_RS17785;Dbxref=GenBank:WP_176452909.1;Name=WP_176452909.1;end_range=288977,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268800.1;locus_tag=CCO34_RS17785;partial=true;product=phage tail protein;protein_id=WP_176452909.1;transl_table=11 ##sequence-region NZ_NPMD01000008.1 1 258836 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000008.1 RefSeq region 1 258836 . + . ID=NZ_NPMD01000008.1:1..258836;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000008.1 RefSeq gene 5 120 . + . ID=gene-CCO34_RS17790;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO34_RS17790;old_locus_tag=CCO34_17785 NZ_NPMD01000008.1 cmsearch rRNA 5 120 . + . ID=rna-CCO34_RS17790;Parent=gene-CCO34_RS17790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS17790;product=5S ribosomal RNA NZ_NPMD01000008.1 cmsearch exon 5 120 . + . ID=exon-CCO34_RS17790-1;Parent=rna-CCO34_RS17790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO34_RS17790;product=5S ribosomal RNA NZ_NPMD01000008.1 RefSeq gene 453 890 . - . ID=gene-CCO34_RS17795;Name=CCO34_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17795;old_locus_tag=CCO34_17790 NZ_NPMD01000008.1 Protein Homology CDS 453 890 . - 0 ID=cds-WP_000973248.1;Parent=gene-CCO34_RS17795;Dbxref=GenBank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=CCO34_RS17795;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 1047 1976 . + . ID=gene-CCO34_RS17800;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=CCO34_RS17800;old_locus_tag=CCO34_17795 NZ_NPMD01000008.1 Protein Homology CDS 1047 1976 . + 0 ID=cds-WP_001122767.1;Parent=gene-CCO34_RS17800;Dbxref=GenBank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=CCO34_RS17800;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122767.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 2245 3846 . + . ID=gene-CCO34_RS17805;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=CCO34_RS17805;old_locus_tag=CCO34_17800 NZ_NPMD01000008.1 Protein Homology CDS 2245 3846 . + 0 ID=cds-WP_001069381.1;Parent=gene-CCO34_RS17805;Dbxref=GenBank:WP_001069381.1;Name=WP_001069381.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=CCO34_RS17805;product=malate synthase A;protein_id=WP_001069381.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 3878 5182 . + . ID=gene-CCO34_RS17810;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=CCO34_RS17810;old_locus_tag=CCO34_17805 NZ_NPMD01000008.1 Protein Homology CDS 3878 5182 . + 0 ID=cds-WP_000857884.1;Parent=gene-CCO34_RS17810;Dbxref=GenBank:WP_000857884.1;Name=WP_000857884.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=CCO34_RS17810;product=isocitrate lyase;protein_id=WP_000857884.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 5284 7035 . + . ID=gene-CCO34_RS17815;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=CCO34_RS17815;old_locus_tag=CCO34_17810 NZ_NPMD01000008.1 Protein Homology CDS 5284 7035 . + 0 ID=cds-WP_001137277.1;Parent=gene-CCO34_RS17815;Dbxref=GenBank:WP_001137277.1;Name=WP_001137277.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=CCO34_RS17815;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137277.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 6999 7406 . - . ID=gene-CCO34_RS17820;Name=CCO34_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17820;old_locus_tag=CCO34_17815 NZ_NPMD01000008.1 Protein Homology CDS 6999 7406 . - 0 ID=cds-WP_077906073.1;Parent=gene-CCO34_RS17820;Dbxref=GenBank:WP_077906073.1;Name=WP_077906073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=CCO34_RS17820;product=ASCH domain-containing protein;protein_id=WP_077906073.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 7417 8241 . - . ID=gene-CCO34_RS17825;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=CCO34_RS17825;old_locus_tag=CCO34_17820 NZ_NPMD01000008.1 Protein Homology CDS 7417 8241 . - 0 ID=cds-WP_000226434.1;Parent=gene-CCO34_RS17825;Dbxref=GenBank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=CCO34_RS17825;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 8546 12229 . + . ID=gene-CCO34_RS17830;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=CCO34_RS17830;old_locus_tag=CCO34_17825 NZ_NPMD01000008.1 Protein Homology CDS 8546 12229 . + 0 ID=cds-WP_000095979.1;Parent=gene-CCO34_RS17830;Dbxref=GenBank:WP_000095979.1;Name=WP_000095979.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=CCO34_RS17830;product=methionine synthase;protein_id=WP_000095979.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 12496 14127 . + . ID=gene-CCO34_RS17835;Name=CCO34_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17835;old_locus_tag=CCO34_17830 NZ_NPMD01000008.1 Protein Homology CDS 12496 14127 . + 0 ID=cds-WP_000956811.1;Parent=gene-CCO34_RS17835;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=CCO34_RS17835;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 14217 14906 . - . ID=gene-CCO34_RS17840;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=CCO34_RS17840;old_locus_tag=CCO34_17835 NZ_NPMD01000008.1 Protein Homology CDS 14217 14906 . - 0 ID=cds-WP_000421783.1;Parent=gene-CCO34_RS17840;Dbxref=GenBank:WP_000421783.1;Name=WP_000421783.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=CCO34_RS17840;product=dipeptidase PepE;protein_id=WP_000421783.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 14978 15079 . + . ID=gene-CCO34_RS17845;Name=CCO34_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17845;old_locus_tag=CCO34_17840 NZ_NPMD01000008.1 Protein Homology CDS 14978 15079 . + 0 ID=cds-WP_010989276.1;Parent=gene-CCO34_RS17845;Dbxref=GenBank:WP_010989276.1;Name=WP_010989276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=CCO34_RS17845;product=hypothetical protein;protein_id=WP_010989276.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 15114 15653 . + . ID=gene-CCO34_RS17850;Name=CCO34_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17850;old_locus_tag=CCO34_17845 NZ_NPMD01000008.1 Protein Homology CDS 15114 15653 . + 0 ID=cds-WP_001096724.1;Parent=gene-CCO34_RS17850;Dbxref=GenBank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=CCO34_RS17850;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 15700 16569 . + . ID=gene-CCO34_RS17855;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=CCO34_RS17855;old_locus_tag=CCO34_17850 NZ_NPMD01000008.1 Protein Homology CDS 15700 16569 . + 0 ID=cds-WP_000954619.1;Parent=gene-CCO34_RS17855;Dbxref=GenBank:WP_000954619.1;Name=WP_000954619.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=CCO34_RS17855;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954619.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 16566 16838 . - . ID=gene-CCO34_RS17860;Name=CCO34_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17860;old_locus_tag=CCO34_17855 NZ_NPMD01000008.1 Protein Homology CDS 16566 16838 . - 0 ID=cds-WP_001207628.1;Parent=gene-CCO34_RS17860;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=CCO34_RS17860;product=DUF3811 domain-containing protein;protein_id=WP_001207628.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 16901 17659 . - . ID=gene-CCO34_RS17865;Name=CCO34_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17865;old_locus_tag=CCO34_17860 NZ_NPMD01000008.1 Protein Homology CDS 16901 17659 . - 0 ID=cds-WP_001068171.1;Parent=gene-CCO34_RS17865;Dbxref=GenBank:WP_001068171.1;Name=WP_001068171.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068167.1;locus_tag=CCO34_RS17865;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001068171.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 17646 18509 . - . ID=gene-CCO34_RS17870;Name=CCO34_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17870;old_locus_tag=CCO34_17865 NZ_NPMD01000008.1 Protein Homology CDS 17646 18509 . - 0 ID=cds-WP_000924652.1;Parent=gene-CCO34_RS17870;Dbxref=GenBank:WP_000924652.1;Name=WP_000924652.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924639.1;locus_tag=CCO34_RS17870;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000924652.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 18526 19365 . - . ID=gene-CCO34_RS17875;Name=CCO34_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17875;old_locus_tag=CCO34_17870 NZ_NPMD01000008.1 Protein Homology CDS 18526 19365 . - 0 ID=cds-WP_000472335.1;Parent=gene-CCO34_RS17875;Dbxref=GenBank:WP_000472335.1;Name=WP_000472335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472335.1;locus_tag=CCO34_RS17875;product=hypothetical protein;protein_id=WP_000472335.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 19389 20978 . - . ID=gene-CCO34_RS17880;Name=CCO34_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17880;old_locus_tag=CCO34_17875 NZ_NPMD01000008.1 Protein Homology CDS 19389 20978 . - 0 ID=cds-WP_000716850.1;Parent=gene-CCO34_RS17880;Dbxref=GenBank:WP_000716850.1;Name=WP_000716850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716843.1;locus_tag=CCO34_RS17880;product=PTS sugar transporter;protein_id=WP_000716850.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 21401 21916 . - . ID=gene-CCO34_RS17885;Name=CCO34_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17885;old_locus_tag=CCO34_17880 NZ_NPMD01000008.1 Protein Homology CDS 21401 21916 . - 0 ID=cds-WP_001177097.1;Parent=gene-CCO34_RS17885;Dbxref=GenBank:WP_001177097.1;Name=WP_001177097.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750962.1;locus_tag=CCO34_RS17885;product=tail fiber assembly protein;protein_id=WP_001177097.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 21926 23407 . - . ID=gene-CCO34_RS17890;Name=CCO34_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17890;old_locus_tag=CCO34_17885 NZ_NPMD01000008.1 Protein Homology CDS 21926 23407 . - 0 ID=cds-WP_000368203.1;Parent=gene-CCO34_RS17890;Dbxref=GenBank:WP_000368203.1;Name=WP_000368203.1;Ontology_term=GO:0019062,GO:0046718;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368212.1;locus_tag=CCO34_RS17890;product=tail fiber protein;protein_id=WP_000368203.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 23410 24042 . - . ID=gene-CCO34_RS17895;Name=CCO34_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17895;old_locus_tag=CCO34_17890 NZ_NPMD01000008.1 Protein Homology CDS 23410 24042 . - 0 ID=cds-WP_000359508.1;Parent=gene-CCO34_RS17895;Dbxref=GenBank:WP_000359508.1;Name=WP_000359508.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=CCO34_RS17895;product=phage tail protein I;protein_id=WP_000359508.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 24035 25150 . - . ID=gene-CCO34_RS17900;Name=CCO34_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17900;old_locus_tag=CCO34_17895 NZ_NPMD01000008.1 Protein Homology CDS 24035 25150 . - 0 ID=cds-WP_000951736.1;Parent=gene-CCO34_RS17900;Dbxref=GenBank:WP_000951736.1;Name=WP_000951736.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=CCO34_RS17900;product=baseplate assembly protein;protein_id=WP_000951736.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 25141 25500 . - . ID=gene-CCO34_RS17905;Name=CCO34_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17905;old_locus_tag=CCO34_17900 NZ_NPMD01000008.1 Protein Homology CDS 25141 25500 . - 0 ID=cds-WP_001093501.1;Parent=gene-CCO34_RS17905;Dbxref=GenBank:WP_001093501.1;Name=WP_001093501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=CCO34_RS17905;product=GPW/gp25 family protein;protein_id=WP_001093501.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 25664 27211 . - . ID=gene-CCO34_RS17910;Name=CCO34_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17910;old_locus_tag=CCO34_17905 NZ_NPMD01000008.1 Protein Homology CDS 25664 27211 . - 0 ID=cds-WP_001095011.1;Parent=gene-CCO34_RS17910;Dbxref=GenBank:WP_001095011.1;Name=WP_001095011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463069.1;locus_tag=CCO34_RS17910;product=DUF6056 family protein;protein_id=WP_001095011.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 27211 28140 . - . ID=gene-CCO34_RS17915;Name=CCO34_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17915;old_locus_tag=CCO34_17910 NZ_NPMD01000008.1 Protein Homology CDS 27211 28140 . - 0 ID=cds-WP_000703628.1;Parent=gene-CCO34_RS17915;Dbxref=GenBank:WP_000703628.1;Name=WP_000703628.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463070.1;locus_tag=CCO34_RS17915;product=glycosyltransferase family 2 protein;protein_id=WP_000703628.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 28137 28499 . - . ID=gene-CCO34_RS17920;Name=CCO34_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17920;old_locus_tag=CCO34_17915 NZ_NPMD01000008.1 Protein Homology CDS 28137 28499 . - 0 ID=cds-WP_000593184.1;Parent=gene-CCO34_RS17920;Dbxref=GenBank:WP_000593184.1;Name=WP_000593184.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=CCO34_RS17920;product=GtrA family protein;protein_id=WP_000593184.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 28827 29549 . - . ID=gene-CCO34_RS17925;Name=CCO34_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17925;old_locus_tag=CCO34_17920 NZ_NPMD01000008.1 Protein Homology CDS 28827 29549 . - 0 ID=cds-WP_000679397.1;Parent=gene-CCO34_RS17925;Dbxref=GenBank:WP_000679397.1;Name=WP_000679397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=CCO34_RS17925;product=phage baseplate assembly protein V;protein_id=WP_000679397.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 29559 30602 . - . ID=gene-CCO34_RS17930;Name=CCO34_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17930;old_locus_tag=CCO34_17925 NZ_NPMD01000008.1 Protein Homology CDS 29559 30602 . - 0 ID=cds-WP_001535840.1;Parent=gene-CCO34_RS17930;Dbxref=GenBank:WP_001535840.1;Name=WP_001535840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=CCO34_RS17930;product=phage late control D family protein;protein_id=WP_001535840.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 30590 30799 . - . ID=gene-CCO34_RS17935;Name=CCO34_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17935;old_locus_tag=CCO34_17930 NZ_NPMD01000008.1 Protein Homology CDS 30590 30799 . - 0 ID=cds-WP_001269717.1;Parent=gene-CCO34_RS17935;Dbxref=GenBank:WP_001269717.1;Name=WP_001269717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=CCO34_RS17935;product=tail protein X;protein_id=WP_001269717.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 30799 31752 . - . ID=gene-CCO34_RS17940;Name=CCO34_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17940;old_locus_tag=CCO34_17935 NZ_NPMD01000008.1 Protein Homology CDS 30799 31752 . - 0 ID=cds-WP_000271421.1;Parent=gene-CCO34_RS17940;Dbxref=GenBank:WP_000271421.1;Name=WP_000271421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=CCO34_RS17940;product=phage tail protein;protein_id=WP_000271421.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 31752 34106 . - . ID=gene-CCO34_RS17945;Name=CCO34_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17945;old_locus_tag=CCO34_17940 NZ_NPMD01000008.1 Protein Homology CDS 31752 34106 . - 0 ID=cds-WP_001262485.1;Parent=gene-CCO34_RS17945;Dbxref=GenBank:WP_001262485.1;Name=WP_001262485.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=CCO34_RS17945;product=phage tail tape measure protein;protein_id=WP_001262485.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 34203 34331 . - . ID=gene-CCO34_RS26100;Name=CCO34_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS26100;old_locus_tag=CCO34_17945 NZ_NPMD01000008.1 Protein Homology CDS 34203 34331 . - 0 ID=cds-WP_001185654.1;Parent=gene-CCO34_RS26100;Dbxref=GenBank:WP_001185654.1;Name=WP_001185654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=CCO34_RS26100;product=GpE family phage tail protein;protein_id=WP_001185654.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 34291 34608 . - . ID=gene-CCO34_RS17955;Name=CCO34_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17955;old_locus_tag=CCO34_17950 NZ_NPMD01000008.1 Protein Homology CDS 34291 34608 . - 0 ID=cds-WP_001003639.1;Parent=gene-CCO34_RS17955;Dbxref=GenBank:WP_001003639.1;Name=WP_001003639.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=CCO34_RS17955;product=phage tail assembly protein;protein_id=WP_001003639.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 34660 35184 . - . ID=gene-CCO34_RS17960;Name=CCO34_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17960;old_locus_tag=CCO34_17955 NZ_NPMD01000008.1 Protein Homology CDS 34660 35184 . - 0 ID=cds-WP_000907494.1;Parent=gene-CCO34_RS17960;Dbxref=GenBank:WP_000907494.1;Name=WP_000907494.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=CCO34_RS17960;product=phage major tail tube protein;protein_id=WP_000907494.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 35184 36611 . - . ID=gene-CCO34_RS17965;Name=CCO34_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17965;old_locus_tag=CCO34_17960 NZ_NPMD01000008.1 Protein Homology CDS 35184 36611 . - 0 ID=cds-WP_000729852.1;Parent=gene-CCO34_RS17965;Dbxref=GenBank:WP_000729852.1;Name=WP_000729852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463078.1;locus_tag=CCO34_RS17965;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_000729852.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 36601 36798 . - . ID=gene-CCO34_RS17970;Name=CCO34_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17970;old_locus_tag=CCO34_17965 NZ_NPMD01000008.1 Protein Homology CDS 36601 36798 . - 0 ID=cds-WP_000875314.1;Parent=gene-CCO34_RS17970;Dbxref=GenBank:WP_000875314.1;Name=WP_000875314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=CCO34_RS17970;product=hypothetical protein;protein_id=WP_000875314.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 36795 37250 . - . ID=gene-CCO34_RS17975;Name=CCO34_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17975;old_locus_tag=CCO34_17970 NZ_NPMD01000008.1 Protein Homology CDS 36795 37250 . - 0 ID=cds-WP_000449435.1;Parent=gene-CCO34_RS17975;Dbxref=GenBank:WP_000449435.1;Name=WP_000449435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=CCO34_RS17975;product=Gp37 family protein;protein_id=WP_000449435.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 37410 37724 . - . ID=gene-CCO34_RS17980;Name=CCO34_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17980;old_locus_tag=CCO34_17975 NZ_NPMD01000008.1 Protein Homology CDS 37410 37724 . - 0 ID=cds-WP_000777266.1;Parent=gene-CCO34_RS17980;Dbxref=GenBank:WP_000777266.1;Name=WP_000777266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463081.1;locus_tag=CCO34_RS17980;product=membrane protein;protein_id=WP_000777266.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 37737 38342 . - . ID=gene-CCO34_RS17985;Name=CCO34_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17985;old_locus_tag=CCO34_17980 NZ_NPMD01000008.1 Protein Homology CDS 37737 38342 . - 0 ID=cds-WP_001270427.1;Parent=gene-CCO34_RS17985;Dbxref=GenBank:WP_001270427.1;Name=WP_001270427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=CCO34_RS17985;product=lytic transglycosylase domain-containing protein;protein_id=WP_001270427.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 38345 38632 . - . ID=gene-CCO34_RS17990;Name=CCO34_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17990;old_locus_tag=CCO34_17985 NZ_NPMD01000008.1 Protein Homology CDS 38345 38632 . - 0 ID=cds-WP_001226439.1;Parent=gene-CCO34_RS17990;Dbxref=GenBank:WP_001226439.1;Name=WP_001226439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=CCO34_RS17990;product=putative holin;protein_id=WP_001226439.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 39209 39556 . + . ID=gene-CCO34_RS17995;Name=CCO34_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS17995;old_locus_tag=CCO34_17990 NZ_NPMD01000008.1 Protein Homology CDS 39209 39556 . + 0 ID=cds-WP_000615248.1;Parent=gene-CCO34_RS17995;Dbxref=GenBank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=CCO34_RS17995;product=Mor transcription activator family protein;protein_id=WP_000615248.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 39687 41036 . - . ID=gene-CCO34_RS18000;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO34_RS18000;old_locus_tag=CCO34_17995 NZ_NPMD01000008.1 Protein Homology CDS 39687 41036 . - 0 ID=cds-WP_000136394.1;Parent=gene-CCO34_RS18000;Dbxref=GenBank:WP_000136394.1;Name=WP_000136394.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=CCO34_RS18000;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136394.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 41381 43030 . + . ID=gene-CCO34_RS18005;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=CCO34_RS18005;old_locus_tag=CCO34_18000 NZ_NPMD01000008.1 Protein Homology CDS 41381 43030 . + 0 ID=cds-WP_000790026.1;Parent=gene-CCO34_RS18005;Dbxref=GenBank:WP_000790026.1;Name=WP_000790026.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=CCO34_RS18005;product=glucose-6-phosphate isomerase;protein_id=WP_000790026.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 43474 43716 . + . ID=gene-CCO34_RS18010;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=CCO34_RS18010;old_locus_tag=CCO34_18005 NZ_NPMD01000008.1 Protein Homology CDS 43474 43716 . + 0 ID=cds-WP_001541297.1;Parent=gene-CCO34_RS18010;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=CCO34_RS18010;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 43780 44418 . + . ID=gene-CCO34_RS18015;Name=CCO34_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18015;old_locus_tag=CCO34_18010 NZ_NPMD01000008.1 Protein Homology CDS 43780 44418 . + 0 ID=cds-WP_000824797.1;Parent=gene-CCO34_RS18015;Dbxref=GenBank:WP_000824797.1;Name=WP_000824797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=CCO34_RS18015;product=YjbF family lipoprotein;protein_id=WP_000824797.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 44415 45152 . + . ID=gene-CCO34_RS18020;Name=CCO34_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18020;old_locus_tag=CCO34_18015 NZ_NPMD01000008.1 Protein Homology CDS 44415 45152 . + 0 ID=cds-WP_000977961.1;Parent=gene-CCO34_RS18020;Dbxref=GenBank:WP_000977961.1;Name=WP_000977961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=CCO34_RS18020;product=capsule biosynthesis GfcC family protein;protein_id=WP_000977961.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 45152 47248 . + . ID=gene-CCO34_RS18025;Name=CCO34_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18025;old_locus_tag=CCO34_18020 NZ_NPMD01000008.1 Protein Homology CDS 45152 47248 . + 0 ID=cds-WP_000750780.1;Parent=gene-CCO34_RS18025;Dbxref=GenBank:WP_000750780.1;Name=WP_000750780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=CCO34_RS18025;product=YjbH domain-containing protein;protein_id=WP_000750780.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 47391 47801 . + . ID=gene-CCO34_RS18030;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=CCO34_RS18030;old_locus_tag=CCO34_18025 NZ_NPMD01000008.1 Protein Homology CDS 47391 47801 . + 0 ID=cds-WP_000982749.1;Parent=gene-CCO34_RS18030;Dbxref=GenBank:WP_000982749.1;Name=WP_000982749.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=CCO34_RS18030;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982749.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 47967 48857 . - . ID=gene-CCO34_RS18035;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=CCO34_RS18035;old_locus_tag=CCO34_18030 NZ_NPMD01000008.1 Protein Homology CDS 47967 48857 . - 0 ID=cds-WP_001252085.1;Parent=gene-CCO34_RS18035;Dbxref=GenBank:WP_001252085.1;Name=WP_001252085.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=CCO34_RS18035;product=maltose ABC transporter permease MalG;protein_id=WP_001252085.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 48872 50416 . - . ID=gene-CCO34_RS18040;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=CCO34_RS18040;old_locus_tag=CCO34_18035 NZ_NPMD01000008.1 Protein Homology CDS 48872 50416 . - 0 ID=cds-WP_000382570.1;Parent=gene-CCO34_RS18040;Dbxref=GenBank:WP_000382570.1;Name=WP_000382570.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=CCO34_RS18040;product=maltose ABC transporter permease MalF;protein_id=WP_000382570.1;transl_table=11 NZ_NPMD01000008.1 RefSeq pseudogene 50459 50599 . + . ID=gene-CCO34_RS26245;Name=CCO34_RS26245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26245;partial=true;pseudo=true;start_range=.,50459 NZ_NPMD01000008.1 Protein Homology CDS 50459 50599 . + 0 ID=cds-CCO34_RS26245;Parent=gene-CCO34_RS26245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO34_RS26245;partial=true;product=hypothetical protein;pseudo=true;start_range=.,50459;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 50548 51738 . - . ID=gene-CCO34_RS18045;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=CCO34_RS18045;old_locus_tag=CCO34_18040 NZ_NPMD01000008.1 Protein Homology CDS 50548 51738 . - 0 ID=cds-WP_000695415.1;Parent=gene-CCO34_RS18045;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=CCO34_RS18045;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 52100 53209 . + . ID=gene-CCO34_RS18050;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=CCO34_RS18050;old_locus_tag=CCO34_18045 NZ_NPMD01000008.1 Protein Homology CDS 52100 53209 . + 0 ID=cds-WP_000179176.1;Parent=gene-CCO34_RS18050;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=CCO34_RS18050;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 53298 54656 . + . ID=gene-CCO34_RS18055;Name=CCO34_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18055;old_locus_tag=CCO34_18050 NZ_NPMD01000008.1 Protein Homology CDS 53298 54656 . + 0 ID=cds-WP_000973678.1;Parent=gene-CCO34_RS18055;Dbxref=GenBank:WP_000973678.1;Name=WP_000973678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=CCO34_RS18055;product=maltoporin;protein_id=WP_000973678.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 54820 55737 . + . ID=gene-CCO34_RS18060;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=CCO34_RS18060;old_locus_tag=CCO34_18055 NZ_NPMD01000008.1 Protein Homology CDS 54820 55737 . + 0 ID=cds-WP_000782497.1;Parent=gene-CCO34_RS18060;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=CCO34_RS18060;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 55918 56415 . + . ID=gene-CCO34_RS18065;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=CCO34_RS18065;old_locus_tag=CCO34_18060 NZ_NPMD01000008.1 Protein Homology CDS 55918 56415 . + 0 ID=cds-WP_000019230.1;Parent=gene-CCO34_RS18065;Dbxref=GenBank:WP_000019230.1;Name=WP_000019230.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=CCO34_RS18065;product=chorismate lyase;protein_id=WP_000019230.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 56429 57301 . + . ID=gene-CCO34_RS18070;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=CCO34_RS18070;old_locus_tag=CCO34_18065 NZ_NPMD01000008.1 Protein Homology CDS 56429 57301 . + 0 ID=cds-WP_000455249.1;Parent=gene-CCO34_RS18070;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=CCO34_RS18070;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 57400 59820 . - . ID=gene-CCO34_RS18075;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=CCO34_RS18075;old_locus_tag=CCO34_18070 NZ_NPMD01000008.1 Protein Homology CDS 57400 59820 . - 0 ID=cds-WP_000017360.1;Parent=gene-CCO34_RS18075;Dbxref=GenBank:WP_000017360.1;Name=WP_000017360.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=CCO34_RS18075;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017360.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 59991 60359 . + . ID=gene-CCO34_RS18080;Name=CCO34_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18080;old_locus_tag=CCO34_18075 NZ_NPMD01000008.1 Protein Homology CDS 59991 60359 . + 0 ID=cds-WP_023228823.1;Parent=gene-CCO34_RS18080;Dbxref=GenBank:WP_023228823.1;Name=WP_023228823.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=CCO34_RS18080;product=diacylglycerol kinase;protein_id=WP_023228823.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 60468 61076 . + . ID=gene-CCO34_RS18085;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CCO34_RS18085;old_locus_tag=CCO34_18080 NZ_NPMD01000008.1 Protein Homology CDS 60468 61076 . + 0 ID=cds-WP_000646079.1;Parent=gene-CCO34_RS18085;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=CCO34_RS18085;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 61255 62580 . + . ID=gene-CCO34_RS18090;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=CCO34_RS18090;old_locus_tag=CCO34_18085 NZ_NPMD01000008.1 Protein Homology CDS 61255 62580 . + 0 ID=cds-WP_023228822.1;Parent=gene-CCO34_RS18090;Dbxref=GenBank:WP_023228822.1;Name=WP_023228822.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=CCO34_RS18090;product=MATE family efflux transporter DinF;protein_id=WP_023228822.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 62577 62690 . + . ID=gene-CCO34_RS18095;Name=CCO34_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18095;old_locus_tag=CCO34_18090 NZ_NPMD01000008.1 Protein Homology CDS 62577 62690 . + 0 ID=cds-WP_077906072.1;Parent=gene-CCO34_RS18095;Dbxref=GenBank:WP_077906072.1;Name=WP_077906072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=CCO34_RS18095;product=hypothetical protein;protein_id=WP_077906072.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 62712 62921 . + . ID=gene-CCO34_RS18100;Name=CCO34_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18100;old_locus_tag=CCO34_18095 NZ_NPMD01000008.1 Protein Homology CDS 62712 62921 . + 0 ID=cds-WP_001030592.1;Parent=gene-CCO34_RS18100;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=CCO34_RS18100;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 63021 63536 . - . ID=gene-CCO34_RS18105;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=CCO34_RS18105;old_locus_tag=CCO34_18100 NZ_NPMD01000008.1 Protein Homology CDS 63021 63536 . - 0 ID=cds-WP_000416271.1;Parent=gene-CCO34_RS18105;Dbxref=GenBank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=CCO34_RS18105;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 63783 65093 . + . ID=gene-CCO34_RS18110;Name=CCO34_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18110;old_locus_tag=CCO34_18105 NZ_NPMD01000008.1 Protein Homology CDS 63783 65093 . + 0 ID=cds-WP_001039328.1;Parent=gene-CCO34_RS18110;Dbxref=GenBank:WP_001039328.1;Name=WP_001039328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=CCO34_RS18110;product=conjugal transfer protein TraF;protein_id=WP_001039328.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 65181 66179 . + . ID=gene-CCO34_RS18115;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=CCO34_RS18115;old_locus_tag=CCO34_18110 NZ_NPMD01000008.1 Protein Homology CDS 65181 66179 . + 0 ID=cds-WP_001182231.1;Parent=gene-CCO34_RS18115;Dbxref=GenBank:WP_001182231.1;Name=WP_001182231.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=CCO34_RS18115;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001182231.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 66347 66589 . + . ID=gene-CCO34_RS18120;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=CCO34_RS18120;old_locus_tag=CCO34_18115 NZ_NPMD01000008.1 Protein Homology CDS 66347 66589 . + 0 ID=cds-WP_000891414.1;Parent=gene-CCO34_RS18120;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=CCO34_RS18120;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 66763 67746 . - . ID=gene-CCO34_RS18125;Name=CCO34_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18125;old_locus_tag=CCO34_18120 NZ_NPMD01000008.1 Protein Homology CDS 66763 67746 . - 0 ID=cds-WP_000235555.1;Parent=gene-CCO34_RS18125;Dbxref=GenBank:WP_000235555.1;Name=WP_000235555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=CCO34_RS18125;product=quinone oxidoreductase;protein_id=WP_000235555.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 67811 69226 . + . ID=gene-CCO34_RS18130;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CCO34_RS18130;old_locus_tag=CCO34_18125 NZ_NPMD01000008.1 Protein Homology CDS 67811 69226 . + 0 ID=cds-WP_000918353.1;Parent=gene-CCO34_RS18130;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=CCO34_RS18130;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 69258 70337 . + . ID=gene-CCO34_RS18135;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CCO34_RS18135;old_locus_tag=CCO34_18130 NZ_NPMD01000008.1 Protein Homology CDS 69258 70337 . + 0 ID=cds-WP_001147301.1;Parent=gene-CCO34_RS18135;Dbxref=GenBank:WP_001147301.1;Name=WP_001147301.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=CCO34_RS18135;product=alanine racemase;protein_id=WP_001147301.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 70523 71716 . + . ID=gene-CCO34_RS18140;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=CCO34_RS18140;old_locus_tag=CCO34_18135 NZ_NPMD01000008.1 Protein Homology CDS 70523 71716 . + 0 ID=cds-WP_000486910.1;Parent=gene-CCO34_RS18140;Dbxref=GenBank:WP_000486910.1;Name=WP_000486910.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=CCO34_RS18140;product=aromatic amino acid transaminase;protein_id=WP_000486910.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 71903 72616 . + . ID=gene-CCO34_RS18145;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=CCO34_RS18145;old_locus_tag=CCO34_18140 NZ_NPMD01000008.1 Protein Homology CDS 71903 72616 . + 0 ID=cds-WP_000724435.1;Parent=gene-CCO34_RS18145;Dbxref=GenBank:WP_000724435.1;Name=WP_000724435.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=CCO34_RS18145;product=acid phosphatase AphA;protein_id=WP_000724435.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 72745 73161 . + . ID=gene-CCO34_RS18150;Name=CCO34_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18150;old_locus_tag=CCO34_18145 NZ_NPMD01000008.1 Protein Homology CDS 72745 73161 . + 0 ID=cds-WP_000270392.1;Parent=gene-CCO34_RS18150;Dbxref=GenBank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=CCO34_RS18150;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 73164 73520 . + . ID=gene-CCO34_RS18155;Name=CCO34_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18155;old_locus_tag=CCO34_18150 NZ_NPMD01000008.1 Protein Homology CDS 73164 73520 . + 0 ID=cds-WP_000155665.1;Parent=gene-CCO34_RS18155;Dbxref=GenBank:WP_000155665.1;Name=WP_000155665.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=CCO34_RS18155;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155665.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 73521 73859 . - . ID=gene-CCO34_RS18160;Name=CCO34_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18160;old_locus_tag=CCO34_18155 NZ_NPMD01000008.1 Protein Homology CDS 73521 73859 . - 0 ID=cds-WP_000146591.1;Parent=gene-CCO34_RS18160;Dbxref=GenBank:WP_000146591.1;Name=WP_000146591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=CCO34_RS18160;product=hypothetical protein;protein_id=WP_000146591.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 73846 74301 . - . ID=gene-CCO34_RS18165;Name=CCO34_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18165;old_locus_tag=CCO34_18160 NZ_NPMD01000008.1 Protein Homology CDS 73846 74301 . - 0 ID=cds-WP_080181020.1;Parent=gene-CCO34_RS18165;Dbxref=GenBank:WP_080181020.1;Name=WP_080181020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=CCO34_RS18165;product=hypothetical protein;protein_id=WP_080181020.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 74433 77258 . - . ID=gene-CCO34_RS18170;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CCO34_RS18170;old_locus_tag=CCO34_18165 NZ_NPMD01000008.1 Protein Homology CDS 74433 77258 . - 0 ID=cds-WP_000357724.1;Parent=gene-CCO34_RS18170;Dbxref=GenBank:WP_000357724.1;Name=WP_000357724.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=CCO34_RS18170;product=excinuclease ABC subunit UvrA;protein_id=WP_000357724.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 77506 78036 . + . ID=gene-CCO34_RS18180;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=CCO34_RS18180;old_locus_tag=CCO34_18175 NZ_NPMD01000008.1 Protein Homology CDS 77506 78036 . + 0 ID=cds-WP_000168322.1;Parent=gene-CCO34_RS18180;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=CCO34_RS18180;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 79286 79918 . + . ID=gene-CCO34_RS18185;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=CCO34_RS18185;old_locus_tag=CCO34_18180 NZ_NPMD01000008.1 Protein Homology CDS 79286 79918 . + 0 ID=cds-WP_000389231.1;Parent=gene-CCO34_RS18185;Dbxref=GenBank:WP_000389231.1;Name=WP_000389231.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=CCO34_RS18185;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389231.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 79915 81303 . + . ID=gene-CCO34_RS18190;Name=CCO34_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18190;old_locus_tag=CCO34_18185 NZ_NPMD01000008.1 Protein Homology CDS 79915 81303 . + 0 ID=cds-WP_000875192.1;Parent=gene-CCO34_RS18190;Dbxref=GenBank:WP_000875192.1;Name=WP_000875192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=CCO34_RS18190;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_000875192.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 81293 82612 . + . ID=gene-CCO34_RS18195;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=CCO34_RS18195;old_locus_tag=CCO34_18190 NZ_NPMD01000008.1 Protein Homology CDS 81293 82612 . + 0 ID=cds-WP_001670706.1;Parent=gene-CCO34_RS18195;Dbxref=GenBank:WP_001670706.1;Name=WP_001670706.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=CCO34_RS18195;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_001670706.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 82609 83886 . + . ID=gene-CCO34_RS18200;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=CCO34_RS18200;old_locus_tag=CCO34_18195 NZ_NPMD01000008.1 Protein Homology CDS 82609 83886 . + 0 ID=cds-WP_001081935.1;Parent=gene-CCO34_RS18200;Dbxref=GenBank:WP_001081935.1;Name=WP_001081935.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=CCO34_RS18200;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081935.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 83903 100582 . + . ID=gene-CCO34_RS18205;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=CCO34_RS18205;old_locus_tag=CCO34_18200 NZ_NPMD01000008.1 Protein Homology CDS 83903 100582 . + 0 ID=cds-WP_000527221.1;Parent=gene-CCO34_RS18205;Dbxref=GenBank:WP_000527221.1;Name=WP_000527221.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=CCO34_RS18205;product=non-fimbrial adhesin SiiE;protein_id=WP_000527221.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 100622 102688 . + . ID=gene-CCO34_RS18210;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=CCO34_RS18210;old_locus_tag=CCO34_18205 NZ_NPMD01000008.1 Protein Homology CDS 100622 102688 . + 0 ID=cds-WP_000358578.1;Parent=gene-CCO34_RS18210;Dbxref=GenBank:WP_000358578.1;Name=WP_000358578.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=CCO34_RS18210;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_000358578.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 102966 103247 . - . ID=gene-CCO34_RS18215;Name=CCO34_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18215;old_locus_tag=CCO34_18210 NZ_NPMD01000008.1 Protein Homology CDS 102966 103247 . - 0 ID=cds-WP_000719058.1;Parent=gene-CCO34_RS18215;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=CCO34_RS18215;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 103810 105411 . + . ID=gene-CCO34_RS18220;Name=CCO34_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18220;old_locus_tag=CCO34_18215 NZ_NPMD01000008.1 Protein Homology CDS 103810 105411 . + 0 ID=cds-WP_000083651.1;Parent=gene-CCO34_RS18220;Dbxref=GenBank:WP_000083651.1;Name=WP_000083651.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=CCO34_RS18220;product=EAL domain-containing protein;protein_id=WP_000083651.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 105399 105722 . - . ID=gene-CCO34_RS18225;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=CCO34_RS18225;old_locus_tag=CCO34_18220 NZ_NPMD01000008.1 Protein Homology CDS 105399 105722 . - 0 ID=cds-WP_000019483.1;Parent=gene-CCO34_RS18225;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=CCO34_RS18225;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 105809 106267 . + . ID=gene-CCO34_RS18230;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=CCO34_RS18230;old_locus_tag=CCO34_18225 NZ_NPMD01000008.1 Protein Homology CDS 105809 106267 . + 0 ID=cds-WP_000412686.1;Parent=gene-CCO34_RS18230;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=CCO34_RS18230;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 106560 107228 . + . ID=gene-CCO34_RS18235;Name=CCO34_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18235;old_locus_tag=CCO34_18230 NZ_NPMD01000008.1 Protein Homology CDS 106560 107228 . + 0 ID=cds-WP_000958575.1;Parent=gene-CCO34_RS18235;Dbxref=GenBank:WP_000958575.1;Name=WP_000958575.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=CCO34_RS18235;product=glutathione S-transferase family protein;protein_id=WP_000958575.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 107575 108924 . + . ID=gene-CCO34_RS18245;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=CCO34_RS18245;old_locus_tag=CCO34_18240 NZ_NPMD01000008.1 Protein Homology CDS 107575 108924 . + 0 ID=cds-WP_000106901.1;Parent=gene-CCO34_RS18245;Dbxref=GenBank:WP_000106901.1;Name=WP_000106901.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=CCO34_RS18245;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106901.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 109074 110720 . + . ID=gene-CCO34_RS18255;Name=CCO34_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18255;old_locus_tag=CCO34_18250 NZ_NPMD01000008.1 Protein Homology CDS 109074 110720 . + 0 ID=cds-WP_001536604.1;Parent=gene-CCO34_RS18255;Dbxref=GenBank:WP_001536604.1;Name=WP_001536604.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=CCO34_RS18255;product=Na+/H+ antiporter;protein_id=WP_001536604.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 110815 111702 . - . ID=gene-CCO34_RS18260;Name=CCO34_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18260;old_locus_tag=CCO34_18255 NZ_NPMD01000008.1 Protein Homology CDS 110815 111702 . - 0 ID=cds-WP_000354962.1;Parent=gene-CCO34_RS18260;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=CCO34_RS18260;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 111806 112216 . + . ID=gene-CCO34_RS18265;Name=CCO34_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18265;old_locus_tag=CCO34_18260 NZ_NPMD01000008.1 Protein Homology CDS 111806 112216 . + 0 ID=cds-WP_000257347.1;Parent=gene-CCO34_RS18265;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=CCO34_RS18265;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 112209 112898 . + . ID=gene-CCO34_RS18270;Name=CCO34_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18270;old_locus_tag=CCO34_18265 NZ_NPMD01000008.1 Protein Homology CDS 112209 112898 . + 0 ID=cds-WP_001067096.1;Parent=gene-CCO34_RS18270;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=CCO34_RS18270;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 112937 114586 . - . ID=gene-CCO34_RS18275;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=CCO34_RS18275;old_locus_tag=CCO34_18270 NZ_NPMD01000008.1 Protein Homology CDS 112937 114586 . - 0 ID=cds-WP_000832536.1;Parent=gene-CCO34_RS18275;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=CCO34_RS18275;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 114583 114897 . - . ID=gene-CCO34_RS18280;Name=CCO34_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18280;old_locus_tag=CCO34_18275 NZ_NPMD01000008.1 Protein Homology CDS 114583 114897 . - 0 ID=cds-WP_000999620.1;Parent=gene-CCO34_RS18280;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=CCO34_RS18280;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 115143 117101 . - . ID=gene-CCO34_RS18285;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=CCO34_RS18285;old_locus_tag=CCO34_18280 NZ_NPMD01000008.1 Protein Homology CDS 115143 117101 . - 0 ID=cds-WP_000083877.1;Parent=gene-CCO34_RS18285;Dbxref=GenBank:WP_000083877.1;Name=WP_000083877.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=CCO34_RS18285;product=acetate--CoA ligase;protein_id=WP_000083877.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 117533 118969 . + . ID=gene-CCO34_RS18295;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=CCO34_RS18295;old_locus_tag=CCO34_18290 NZ_NPMD01000008.1 Protein Homology CDS 117533 118969 . + 0 ID=cds-WP_000101779.1;Parent=gene-CCO34_RS18295;Dbxref=GenBank:WP_000101779.1;Name=WP_000101779.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=CCO34_RS18295;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000101779.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 119014 119580 . + . ID=gene-CCO34_RS18300;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=CCO34_RS18300;old_locus_tag=CCO34_18295 NZ_NPMD01000008.1 Protein Homology CDS 119014 119580 . + 0 ID=cds-WP_000115064.1;Parent=gene-CCO34_RS18300;Dbxref=GenBank:WP_000115064.1;Name=WP_000115064.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=CCO34_RS18300;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115064.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 119577 120248 . + . ID=gene-CCO34_RS18305;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=CCO34_RS18305;old_locus_tag=CCO34_18300 NZ_NPMD01000008.1 Protein Homology CDS 119577 120248 . + 0 ID=cds-WP_001278019.1;Parent=gene-CCO34_RS18305;Dbxref=GenBank:WP_001278019.1;Name=WP_001278019.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=CCO34_RS18305;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278019.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 120245 121201 . + . ID=gene-CCO34_RS18310;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=CCO34_RS18310;old_locus_tag=CCO34_18305 NZ_NPMD01000008.1 Protein Homology CDS 120245 121201 . + 0 ID=cds-WP_000199626.1;Parent=gene-CCO34_RS18310;Dbxref=GenBank:WP_000199626.1;Name=WP_000199626.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=CCO34_RS18310;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000199626.1;transl_table=11 NZ_NPMD01000008.1 RefSeq pseudogene 121194 123432 . + . ID=gene-CCO34_RS18315;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=pseudogene;locus_tag=CCO34_RS18315;old_locus_tag=CCO34_18310;pseudo=true NZ_NPMD01000008.1 Protein Homology CDS 121194 123432 . + 0 ID=cds-CCO34_RS18315;Parent=gene-CCO34_RS18315;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO34_RS18315;product=heme lyase NrfEFG subunit NrfF;pseudo=true;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 123429 124049 . + . ID=gene-CCO34_RS18325;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=CCO34_RS18325;old_locus_tag=CCO34_18320 NZ_NPMD01000008.1 Protein Homology CDS 123429 124049 . + 0 ID=cds-WP_000083234.1;Parent=gene-CCO34_RS18325;Dbxref=GenBank:WP_000083234.1;Name=WP_000083234.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=CCO34_RS18325;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000083234.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 124394 125704 . + . ID=gene-CCO34_RS18330;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=CCO34_RS18330;old_locus_tag=CCO34_18325 NZ_NPMD01000008.1 Protein Homology CDS 124394 125704 . + 0 ID=cds-WP_000793276.1;Parent=gene-CCO34_RS18330;Dbxref=GenBank:WP_000793276.1;Name=WP_000793276.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=CCO34_RS18330;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793276.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 125862 126551 . - . ID=gene-CCO34_RS18335;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=CCO34_RS18335;old_locus_tag=CCO34_18330 NZ_NPMD01000008.1 Protein Homology CDS 125862 126551 . - 0 ID=cds-WP_000771456.1;Parent=gene-CCO34_RS18335;Dbxref=GenBank:WP_000771456.1;Name=WP_000771456.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=CCO34_RS18335;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000771456.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 126728 128875 . - . ID=gene-CCO34_RS18340;Name=CCO34_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18340;old_locus_tag=CCO34_18335 NZ_NPMD01000008.1 Protein Homology CDS 126728 128875 . - 0 ID=cds-WP_011233236.1;Parent=gene-CCO34_RS18340;Dbxref=GenBank:WP_011233236.1;Name=WP_011233236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=CCO34_RS18340;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WP_011233236.1;transl_except=(pos:complement(128456..128458)%2Caa:Sec);transl_table=11 NZ_NPMD01000008.1 RefSeq gene 129230 130138 . - . ID=gene-CCO34_RS18345;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=CCO34_RS18345;old_locus_tag=CCO34_18340 NZ_NPMD01000008.1 Protein Homology CDS 129230 130138 . - 0 ID=cds-WP_000457029.1;Parent=gene-CCO34_RS18345;Dbxref=GenBank:WP_000457029.1;Name=WP_000457029.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=CCO34_RS18345;product=lipid A hydroxylase LpxO;protein_id=WP_000457029.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 130396 130830 . - . ID=gene-CCO34_RS18350;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=CCO34_RS18350;old_locus_tag=CCO34_18345 NZ_NPMD01000008.1 Protein Homology CDS 130396 130830 . - 0 ID=cds-WP_001674343.1;Parent=gene-CCO34_RS18350;Dbxref=GenBank:WP_001674343.1;Name=WP_001674343.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=CCO34_RS18350;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001674343.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 130982 131425 . - . ID=gene-CCO34_RS18355;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=CCO34_RS18355;old_locus_tag=CCO34_18350 NZ_NPMD01000008.1 Protein Homology CDS 130982 131425 . - 0 ID=cds-WP_001131305.1;Parent=gene-CCO34_RS18355;Dbxref=GenBank:WP_001131305.1;Name=WP_001131305.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=CCO34_RS18355;product=VOC family metalloprotein YjdN;protein_id=WP_001131305.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 131545 131880 . - . ID=gene-CCO34_RS18360;Name=CCO34_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18360;old_locus_tag=CCO34_18355 NZ_NPMD01000008.1 Protein Homology CDS 131545 131880 . - 0 ID=cds-WP_000056482.1;Parent=gene-CCO34_RS18360;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=CCO34_RS18360;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 132348 133850 . + . ID=gene-CCO34_RS18365;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=CCO34_RS18365;old_locus_tag=CCO34_18360 NZ_NPMD01000008.1 Protein Homology CDS 132348 133850 . + 0 ID=cds-WP_000919710.1;Parent=gene-CCO34_RS18365;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=CCO34_RS18365;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 133920 134009 . + . ID=gene-CCO34_RS18370;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=CCO34_RS18370;old_locus_tag=CCO34_18365 NZ_NPMD01000008.1 Protein Homology CDS 133920 134009 . + 0 ID=cds-WP_023243307.1;Parent=gene-CCO34_RS18370;Dbxref=GenBank:WP_023243307.1;Name=WP_023243307.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=CCO34_RS18370;product=LpxT activity modulator PmrR;protein_id=WP_023243307.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 134017 135087 . - . ID=gene-CCO34_RS18375;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=CCO34_RS18375;old_locus_tag=CCO34_18370 NZ_NPMD01000008.1 Protein Homology CDS 134017 135087 . - 0 ID=cds-WP_001212189.1;Parent=gene-CCO34_RS18375;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=CCO34_RS18375;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 135097 135765 . - . ID=gene-CCO34_RS18380;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=CCO34_RS18380;old_locus_tag=CCO34_18375 NZ_NPMD01000008.1 Protein Homology CDS 135097 135765 . - 0 ID=cds-WP_000697899.1;Parent=gene-CCO34_RS18380;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=CCO34_RS18380;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 135762 137405 . - . ID=gene-CCO34_RS18385;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=CCO34_RS18385;old_locus_tag=CCO34_18380 NZ_NPMD01000008.1 Protein Homology CDS 135762 137405 . - 0 ID=cds-WP_053445417.1;Parent=gene-CCO34_RS18385;Dbxref=GenBank:WP_053445417.1;Name=WP_053445417.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=CCO34_RS18385;product=phosphoethanolamine transferase EptA;protein_id=WP_053445417.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 137545 138876 . - . ID=gene-CCO34_RS18390;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=CCO34_RS18390;old_locus_tag=CCO34_18385 NZ_NPMD01000008.1 Protein Homology CDS 137545 138876 . - 0 ID=cds-WP_080180939.1;Parent=gene-CCO34_RS18390;Dbxref=GenBank:WP_080180939.1;Name=WP_080180939.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=CCO34_RS18390;product=arginine/agmatine antiporter;protein_id=WP_080180939.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 139016 139777 . - . ID=gene-CCO34_RS18395;Name=CCO34_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18395;old_locus_tag=CCO34_18390 NZ_NPMD01000008.1 Protein Homology CDS 139016 139777 . - 0 ID=cds-WP_001217074.1;Parent=gene-CCO34_RS18395;Dbxref=GenBank:WP_001217074.1;Name=WP_001217074.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=CCO34_RS18395;product=AraC family transcriptional regulator;protein_id=WP_001217074.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 140074 142341 . - . ID=gene-CCO34_RS18400;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=CCO34_RS18400;old_locus_tag=CCO34_18395 NZ_NPMD01000008.1 Protein Homology CDS 140074 142341 . - 0 ID=cds-WP_094965511.1;Parent=gene-CCO34_RS18400;Dbxref=GenBank:WP_094965511.1;Name=WP_094965511.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=CCO34_RS18400;product=arginine decarboxylase;protein_id=WP_094965511.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 142574 143506 . - . ID=gene-CCO34_RS18405;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=CCO34_RS18405;old_locus_tag=CCO34_18400 NZ_NPMD01000008.1 Protein Homology CDS 142574 143506 . - 0 ID=cds-WP_000106992.1;Parent=gene-CCO34_RS18405;Dbxref=GenBank:WP_000106992.1;Name=WP_000106992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=CCO34_RS18405;product=transcriptional regulator MelR;protein_id=WP_000106992.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 143775 145130 . + . ID=gene-CCO34_RS18410;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=CCO34_RS18410;old_locus_tag=CCO34_18405 NZ_NPMD01000008.1 Protein Homology CDS 143775 145130 . + 0 ID=cds-WP_001520868.1;Parent=gene-CCO34_RS18410;Dbxref=GenBank:WP_001520868.1;Name=WP_001520868.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=CCO34_RS18410;product=alpha-galactosidase;protein_id=WP_001520868.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 145214 146644 . + . ID=gene-CCO34_RS18415;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CCO34_RS18415;old_locus_tag=CCO34_18410 NZ_NPMD01000008.1 Protein Homology CDS 145214 146644 . + 0 ID=cds-WP_000028075.1;Parent=gene-CCO34_RS18415;Dbxref=GenBank:WP_000028075.1;Name=WP_000028075.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=CCO34_RS18415;product=melibiose:sodium transporter MelB;protein_id=WP_000028075.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 146742 148388 . - . ID=gene-CCO34_RS18420;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=CCO34_RS18420;old_locus_tag=CCO34_18415 NZ_NPMD01000008.1 Protein Homology CDS 146742 148388 . - 0 ID=cds-WP_000037201.1;Parent=gene-CCO34_RS18420;Dbxref=GenBank:WP_000037201.1;Name=WP_000037201.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=CCO34_RS18420;product=class I fumarate hydratase FumA;protein_id=WP_000037201.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 148484 149824 . - . ID=gene-CCO34_RS18425;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=CCO34_RS18425;old_locus_tag=CCO34_18420 NZ_NPMD01000008.1 Protein Homology CDS 148484 149824 . - 0 ID=cds-WP_000899149.1;Parent=gene-CCO34_RS18425;Dbxref=GenBank:WP_000899149.1;Name=WP_000899149.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=CCO34_RS18425;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899149.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 149971 150237 . - . ID=gene-CCO34_RS18430;Name=CCO34_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18430;old_locus_tag=CCO34_18425 NZ_NPMD01000008.1 Protein Homology CDS 149971 150237 . - 0 ID=cds-WP_010989095.1;Parent=gene-CCO34_RS18430;Dbxref=GenBank:WP_010989095.1;Name=WP_010989095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=CCO34_RS18430;product=hypothetical protein;protein_id=WP_010989095.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 150554 151273 . - . ID=gene-CCO34_RS18435;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=CCO34_RS18435;old_locus_tag=CCO34_18430 NZ_NPMD01000008.1 Protein Homology CDS 150554 151273 . - 0 ID=cds-WP_000611307.1;Parent=gene-CCO34_RS18435;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=CCO34_RS18435;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 151270 152901 . - . ID=gene-CCO34_RS18440;Name=CCO34_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18440;old_locus_tag=CCO34_18435 NZ_NPMD01000008.1 Protein Homology CDS 151270 152901 . - 0 ID=cds-WP_000682892.1;Parent=gene-CCO34_RS18440;Dbxref=GenBank:WP_000682892.1;Name=WP_000682892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=CCO34_RS18440;product=sensor histidine kinase;protein_id=WP_000682892.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 153257 155686 . + . ID=gene-CCO34_RS18445;Name=CCO34_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18445;old_locus_tag=CCO34_18440 NZ_NPMD01000008.1 Protein Homology CDS 153257 155686 . + 0 ID=cds-WP_000403493.1;Parent=gene-CCO34_RS18445;Dbxref=GenBank:WP_000403493.1;Name=WP_000403493.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=CCO34_RS18445;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_000403493.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 155700 156326 . + . ID=gene-CCO34_RS18450;Name=CCO34_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18450;old_locus_tag=CCO34_18445 NZ_NPMD01000008.1 Protein Homology CDS 155700 156326 . + 0 ID=cds-WP_000816143.1;Parent=gene-CCO34_RS18450;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=CCO34_RS18450;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 156319 157092 . + . ID=gene-CCO34_RS18455;Name=CCO34_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18455;old_locus_tag=CCO34_18450 NZ_NPMD01000008.1 Protein Homology CDS 156319 157092 . + 0 ID=cds-WP_000544929.1;Parent=gene-CCO34_RS18455;Dbxref=GenBank:WP_000544929.1;Name=WP_000544929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=CCO34_RS18455;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544929.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 157168 157761 . + . ID=gene-CCO34_RS18460;Name=CCO34_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18460;old_locus_tag=CCO34_18455 NZ_NPMD01000008.1 Protein Homology CDS 157168 157761 . + 0 ID=cds-WP_001542298.1;Parent=gene-CCO34_RS18460;Dbxref=GenBank:WP_001542298.1;Name=WP_001542298.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=CCO34_RS18460;product=TorD/DmsD family molecular chaperone;protein_id=WP_001542298.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 157845 159245 . - . ID=gene-CCO34_RS18465;Name=CCO34_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18465;old_locus_tag=CCO34_18460 NZ_NPMD01000008.1 Protein Homology CDS 157845 159245 . - 0 ID=cds-WP_000773789.1;Parent=gene-CCO34_RS18465;Dbxref=GenBank:WP_000773789.1;Name=WP_000773789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=CCO34_RS18465;product=DUF7594 domain-containing protein;protein_id=WP_000773789.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 159549 160454 . + . ID=gene-CCO34_RS18470;Name=CCO34_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18470;old_locus_tag=CCO34_18465 NZ_NPMD01000008.1 Protein Homology CDS 159549 160454 . + 0 ID=cds-WP_001268195.1;Parent=gene-CCO34_RS18470;Dbxref=GenBank:WP_001268195.1;Name=WP_001268195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=CCO34_RS18470;product=SdiA-regulated domain-containing protein;protein_id=WP_001268195.1;transl_table=11 NZ_NPMD01000008.1 RefSeq pseudogene 160749 160880 . - . ID=gene-CCO34_RS25865;Name=CCO34_RS25865;end_range=160880,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25865;partial=true;pseudo=true NZ_NPMD01000008.1 Protein Homology CDS 160749 160880 . - 0 ID=cds-CCO34_RS25865;Parent=gene-CCO34_RS25865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=160880,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=CCO34_RS25865;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000008.1 RefSeq pseudogene 160998 161303 . - . ID=gene-CCO34_RS18475;Name=CCO34_RS18475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS18475;old_locus_tag=CCO34_18470;partial=true;pseudo=true;start_range=.,160998 NZ_NPMD01000008.1 Protein Homology CDS 160998 161303 . - 0 ID=cds-CCO34_RS18475;Parent=gene-CCO34_RS18475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=CCO34_RS18475;partial=true;product=Ig-like domain-containing protein;pseudo=true;start_range=.,160998;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 161380 161667 . - . ID=gene-CCO34_RS18480;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=CCO34_RS18480;old_locus_tag=CCO34_18475 NZ_NPMD01000008.1 Protein Homology CDS 161380 161667 . - 0 ID=cds-WP_001541332.1;Parent=gene-CCO34_RS18480;Dbxref=GenBank:WP_001541332.1;Name=WP_001541332.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=CCO34_RS18480;product=transcriptional regulator RtsB;protein_id=WP_001541332.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 161664 162539 . - . ID=gene-CCO34_RS18485;Name=CCO34_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18485;old_locus_tag=CCO34_18480 NZ_NPMD01000008.1 Protein Homology CDS 161664 162539 . - 0 ID=cds-WP_000921676.1;Parent=gene-CCO34_RS18485;Dbxref=GenBank:WP_000921676.1;Name=WP_000921676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=CCO34_RS18485;product=AraC family transcriptional regulator;protein_id=WP_000921676.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 162805 163026 . - . ID=gene-CCO34_RS18490;Name=CCO34_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18490;old_locus_tag=CCO34_18485 NZ_NPMD01000008.1 Protein Homology CDS 162805 163026 . - 0 ID=cds-WP_001576552.1;Parent=gene-CCO34_RS18490;Dbxref=GenBank:WP_001576552.1;Name=WP_001576552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=CCO34_RS18490;product=hypothetical protein;protein_id=WP_001576552.1;transl_table=11 NZ_NPMD01000008.1 RefSeq pseudogene 163143 164024 . + . ID=gene-CCO34_RS18495;Name=CCO34_RS18495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS18495;old_locus_tag=CCO34_18490;pseudo=true NZ_NPMD01000008.1 Protein Homology CDS 163143 164024 . + 0 ID=cds-CCO34_RS18495;Parent=gene-CCO34_RS18495;Note=frameshifted%3B internal stop;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=CCO34_RS18495;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 164362 165363 . + . ID=gene-CCO34_RS18505;Name=CCO34_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18505;old_locus_tag=CCO34_18500 NZ_NPMD01000008.1 Protein Homology CDS 164362 165363 . + 0 ID=cds-WP_000676523.1;Parent=gene-CCO34_RS18505;Dbxref=GenBank:WP_000676523.1;Name=WP_000676523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000676522.1;locus_tag=CCO34_RS18505;product=DUF1202 family protein;protein_id=WP_000676523.1;transl_table=11 NZ_NPMD01000008.1 RefSeq pseudogene 165452 166497 . - . ID=gene-CCO34_RS18510;Name=CCO34_RS18510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS18510;old_locus_tag=CCO34_18505;pseudo=true NZ_NPMD01000008.1 Protein Homology CDS 165452 166497 . - 0 ID=cds-CCO34_RS18510;Parent=gene-CCO34_RS18510;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO34_RS18510;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 166640 167392 . - . ID=gene-CCO34_RS18515;Name=CCO34_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18515;old_locus_tag=CCO34_18510 NZ_NPMD01000008.1 Protein Homology CDS 166640 167392 . - 0 ID=cds-WP_000842424.1;Parent=gene-CCO34_RS18515;Dbxref=GenBank:WP_000842424.1;Name=WP_000842424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=CCO34_RS18515;product=non-specific acid phosphatase;protein_id=WP_000842424.1;transl_table=11 NZ_NPMD01000008.1 RefSeq pseudogene 167949 168023 . + . ID=gene-CCO34_RS18520;Name=CCO34_RS18520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS18520;old_locus_tag=CCO34_18515;partial=true;pseudo=true;start_range=.,167949 NZ_NPMD01000008.1 Protein Homology CDS 167949 168023 . + 0 ID=cds-CCO34_RS18520;Parent=gene-CCO34_RS18520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=CCO34_RS18520;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,167949;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 168103 168178 . - . ID=gene-CCO34_RS18525;Name=CCO34_RS18525;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS18525;old_locus_tag=CCO34_18520 NZ_NPMD01000008.1 tRNAscan-SE tRNA 168103 168178 . - . ID=rna-CCO34_RS18525;Parent=gene-CCO34_RS18525;anticodon=(pos:complement(168143..168145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS18525;product=tRNA-Phe NZ_NPMD01000008.1 tRNAscan-SE exon 168103 168178 . - . ID=exon-CCO34_RS18525-1;Parent=rna-CCO34_RS18525;anticodon=(pos:complement(168143..168145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS18525;product=tRNA-Phe NZ_NPMD01000008.1 RefSeq gene 168294 168869 . - . ID=gene-CCO34_RS18530;Name=CCO34_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18530;old_locus_tag=CCO34_18525 NZ_NPMD01000008.1 Protein Homology CDS 168294 168869 . - 0 ID=cds-WP_001188509.1;Parent=gene-CCO34_RS18530;Dbxref=GenBank:WP_001188509.1;Name=WP_001188509.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=CCO34_RS18530;product=transcriptional regulator;protein_id=WP_001188509.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 168906 170609 . - . ID=gene-CCO34_RS18535;Name=CCO34_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18535;old_locus_tag=CCO34_18530 NZ_NPMD01000008.1 Protein Homology CDS 168906 170609 . - 0 ID=cds-WP_000068898.1;Parent=gene-CCO34_RS18535;Dbxref=GenBank:WP_000068898.1;Name=WP_000068898.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=CCO34_RS18535;product=protein-disulfide reductase DsbD;protein_id=WP_000068898.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 170585 170932 . - . ID=gene-CCO34_RS18540;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=CCO34_RS18540;old_locus_tag=CCO34_18535 NZ_NPMD01000008.1 Protein Homology CDS 170585 170932 . - 0 ID=cds-WP_000887832.1;Parent=gene-CCO34_RS18540;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=CCO34_RS18540;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 171053 172354 . - . ID=gene-CCO34_RS18545;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=CCO34_RS18545;old_locus_tag=CCO34_18540 NZ_NPMD01000008.1 Protein Homology CDS 171053 172354 . - 0 ID=cds-WP_000637595.1;Parent=gene-CCO34_RS18545;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=CCO34_RS18545;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 172469 173905 . - . ID=gene-CCO34_RS18550;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=CCO34_RS18550;old_locus_tag=CCO34_18545 NZ_NPMD01000008.1 Protein Homology CDS 172469 173905 . - 0 ID=cds-WP_000069440.1;Parent=gene-CCO34_RS18550;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=CCO34_RS18550;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 174246 174722 . + . ID=gene-CCO34_RS18555;Name=CCO34_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18555;old_locus_tag=CCO34_18550 NZ_NPMD01000008.1 Protein Homology CDS 174246 174722 . + 0 ID=cds-WP_001267291.1;Parent=gene-CCO34_RS18555;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=CCO34_RS18555;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 174781 176022 . - . ID=gene-CCO34_RS18560;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=CCO34_RS18560;old_locus_tag=CCO34_18555 NZ_NPMD01000008.1 Protein Homology CDS 174781 176022 . - 0 ID=cds-WP_023228817.1;Parent=gene-CCO34_RS18560;Dbxref=GenBank:WP_023228817.1;Name=WP_023228817.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=CCO34_RS18560;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_023228817.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 176298 176591 . + . ID=gene-CCO34_RS18565;Name=CCO34_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18565;old_locus_tag=CCO34_18560 NZ_NPMD01000008.1 Protein Homology CDS 176298 176591 . + 0 ID=cds-WP_000027827.1;Parent=gene-CCO34_RS18565;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=CCO34_RS18565;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 176635 178281 . + . ID=gene-CCO34_RS18570;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CCO34_RS18570;old_locus_tag=CCO34_18565 NZ_NPMD01000008.1 Protein Homology CDS 176635 178281 . + 0 ID=cds-WP_000729126.1;Parent=gene-CCO34_RS18570;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=CCO34_RS18570;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 178525 178878 . + . ID=gene-CCO34_RS18575;Name=CCO34_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18575;old_locus_tag=CCO34_18570 NZ_NPMD01000008.1 Protein Homology CDS 178525 178878 . + 0 ID=cds-WP_000558210.1;Parent=gene-CCO34_RS18575;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=CCO34_RS18575;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 178926 179783 . - . ID=gene-CCO34_RS18580;Name=CCO34_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18580;old_locus_tag=CCO34_18575 NZ_NPMD01000008.1 Protein Homology CDS 178926 179783 . - 0 ID=cds-WP_001229227.1;Parent=gene-CCO34_RS18580;Dbxref=GenBank:WP_001229227.1;Name=WP_001229227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=CCO34_RS18580;product=YjeJ family protein;protein_id=WP_001229227.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 180065 181093 . - . ID=gene-CCO34_RS18585;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=CCO34_RS18585;old_locus_tag=CCO34_18580 NZ_NPMD01000008.1 Protein Homology CDS 180065 181093 . - 0 ID=cds-WP_000940475.1;Parent=gene-CCO34_RS18585;Dbxref=GenBank:WP_000940475.1;Name=WP_000940475.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313154.1;locus_tag=CCO34_RS18585;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940475.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 181134 181700 . + . ID=gene-CCO34_RS18590;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CCO34_RS18590;old_locus_tag=CCO34_18585 NZ_NPMD01000008.1 Protein Homology CDS 181134 181700 . + 0 ID=cds-WP_000257282.1;Parent=gene-CCO34_RS18590;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=CCO34_RS18590;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 181761 181895 . + . ID=gene-CCO34_RS18595;Name=CCO34_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18595;old_locus_tag=CCO34_18590 NZ_NPMD01000008.1 Protein Homology CDS 181761 181895 . + 0 ID=cds-WP_001670700.1;Parent=gene-CCO34_RS18595;Dbxref=GenBank:WP_001670700.1;Name=WP_001670700.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=CCO34_RS18595;product=entericidin A/B family lipoprotein;protein_id=WP_001670700.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 182003 182149 . + . ID=gene-CCO34_RS18600;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=CCO34_RS18600;old_locus_tag=CCO34_18595 NZ_NPMD01000008.1 Protein Homology CDS 182003 182149 . + 0 ID=cds-WP_000239598.1;Parent=gene-CCO34_RS18600;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=CCO34_RS18600;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 182180 182767 . - . ID=gene-CCO34_RS18605;Name=CCO34_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18605;old_locus_tag=CCO34_18600 NZ_NPMD01000008.1 Protein Homology CDS 182180 182767 . - 0 ID=cds-WP_000912957.1;Parent=gene-CCO34_RS18605;Dbxref=GenBank:WP_000912957.1;Name=WP_000912957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=CCO34_RS18605;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912957.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 183024 183341 . + . ID=gene-CCO34_RS18610;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=CCO34_RS18610;old_locus_tag=CCO34_18605 NZ_NPMD01000008.1 Protein Homology CDS 183024 183341 . + 0 ID=cds-WP_000118469.1;Parent=gene-CCO34_RS18610;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=CCO34_RS18610;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 183358 183891 . - . ID=gene-CCO34_RS18615;Name=CCO34_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18615;old_locus_tag=CCO34_18610 NZ_NPMD01000008.1 Protein Homology CDS 183358 183891 . - 0 ID=cds-WP_001238396.1;Parent=gene-CCO34_RS18615;Dbxref=GenBank:WP_001238396.1;Name=WP_001238396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=CCO34_RS18615;product=lipocalin family protein;protein_id=WP_001238396.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 184003 184362 . - . ID=gene-CCO34_RS18620;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=CCO34_RS18620;old_locus_tag=CCO34_18615 NZ_NPMD01000008.1 Protein Homology CDS 184003 184362 . - 0 ID=cds-WP_000609650.1;Parent=gene-CCO34_RS18620;Dbxref=GenBank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=CCO34_RS18620;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 184373 184768 . - . ID=gene-CCO34_RS18625;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=CCO34_RS18625;old_locus_tag=CCO34_18620 NZ_NPMD01000008.1 Protein Homology CDS 184373 184768 . - 0 ID=cds-WP_000208749.1;Parent=gene-CCO34_RS18625;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=CCO34_RS18625;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 184779 185513 . - . ID=gene-CCO34_RS18630;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=CCO34_RS18630;old_locus_tag=CCO34_18625 NZ_NPMD01000008.1 Protein Homology CDS 184779 185513 . - 0 ID=cds-WP_000829509.1;Parent=gene-CCO34_RS18630;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=CCO34_RS18630;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 185506 187296 . - . ID=gene-CCO34_RS18635;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=CCO34_RS18635;old_locus_tag=CCO34_18630 NZ_NPMD01000008.1 Protein Homology CDS 185506 187296 . - 0 ID=cds-WP_001192954.1;Parent=gene-CCO34_RS18635;Dbxref=GenBank:WP_001192954.1;Name=WP_001192954.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=CCO34_RS18635;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 187619 188596 . + . ID=gene-CCO34_RS18640;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=CCO34_RS18640;old_locus_tag=CCO34_18635 NZ_NPMD01000008.1 Protein Homology CDS 187619 188596 . + 0 ID=cds-WP_000004794.1;Parent=gene-CCO34_RS18640;Dbxref=GenBank:WP_000004794.1;Name=WP_000004794.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=CCO34_RS18640;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004794.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 188822 190324 . + . ID=gene-CCO34_RS18645;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=CCO34_RS18645;old_locus_tag=CCO34_18640 NZ_NPMD01000008.1 Protein Homology CDS 188822 190324 . + 0 ID=cds-WP_000149872.1;Parent=gene-CCO34_RS18645;Dbxref=GenBank:WP_000149872.1;Name=WP_000149872.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=CCO34_RS18645;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000149872.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 190389 190709 . + . ID=gene-CCO34_RS18650;Name=CCO34_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18650;old_locus_tag=CCO34_18645 NZ_NPMD01000008.1 Protein Homology CDS 190389 190709 . + 0 ID=cds-WP_001736544.1;Parent=gene-CCO34_RS18650;Dbxref=GenBank:WP_001736544.1;Name=WP_001736544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=CCO34_RS18650;product=hypothetical protein;protein_id=WP_001736544.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 190846 194172 . - . ID=gene-CCO34_RS18655;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=CCO34_RS18655;old_locus_tag=CCO34_18650 NZ_NPMD01000008.1 Protein Homology CDS 190846 194172 . - 0 ID=cds-WP_001525129.1;Parent=gene-CCO34_RS18655;Dbxref=GenBank:WP_001525129.1;Name=WP_001525129.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=CCO34_RS18655;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001525129.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 194191 195159 . - . ID=gene-CCO34_RS18660;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO34_RS18660;old_locus_tag=CCO34_18655 NZ_NPMD01000008.1 Protein Homology CDS 194191 195159 . - 0 ID=cds-WP_000934949.1;Parent=gene-CCO34_RS18660;Dbxref=GenBank:WP_000934949.1;Name=WP_000934949.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=CCO34_RS18660;product=archaetidylserine decarboxylase;protein_id=WP_000934949.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 195251 196303 . - . ID=gene-CCO34_RS18665;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CCO34_RS18665;old_locus_tag=CCO34_18660 NZ_NPMD01000008.1 Protein Homology CDS 195251 196303 . - 0 ID=cds-WP_000041950.1;Parent=gene-CCO34_RS18665;Dbxref=GenBank:WP_000041950.1;Name=WP_000041950.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=CCO34_RS18665;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041950.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 196410 196955 . + . ID=gene-CCO34_RS18670;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=CCO34_RS18670;old_locus_tag=CCO34_18665 NZ_NPMD01000008.1 Protein Homology CDS 196410 196955 . + 0 ID=cds-WP_001271546.1;Parent=gene-CCO34_RS18670;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=CCO34_RS18670;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 197017 197757 . - . ID=gene-CCO34_RS18675;Name=CCO34_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18675;old_locus_tag=CCO34_18670 NZ_NPMD01000008.1 Protein Homology CDS 197017 197757 . - 0 ID=cds-WP_000727897.1;Parent=gene-CCO34_RS18675;Dbxref=GenBank:WP_000727897.1;Name=WP_000727897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=CCO34_RS18675;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727897.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 198033 198108 . + . ID=gene-CCO34_RS18680;Name=CCO34_RS18680;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS18680;old_locus_tag=CCO34_18675 NZ_NPMD01000008.1 tRNAscan-SE tRNA 198033 198108 . + . ID=rna-CCO34_RS18680;Parent=gene-CCO34_RS18680;anticodon=(pos:198066..198068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS18680;product=tRNA-Gly NZ_NPMD01000008.1 tRNAscan-SE exon 198033 198108 . + . ID=exon-CCO34_RS18680-1;Parent=rna-CCO34_RS18680;anticodon=(pos:198066..198068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS18680;product=tRNA-Gly NZ_NPMD01000008.1 RefSeq gene 198265 198340 . + . ID=gene-CCO34_RS18685;Name=CCO34_RS18685;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS18685;old_locus_tag=CCO34_18680 NZ_NPMD01000008.1 tRNAscan-SE tRNA 198265 198340 . + . ID=rna-CCO34_RS18685;Parent=gene-CCO34_RS18685;anticodon=(pos:198298..198300);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS18685;product=tRNA-Gly NZ_NPMD01000008.1 tRNAscan-SE exon 198265 198340 . + . ID=exon-CCO34_RS18685-1;Parent=rna-CCO34_RS18685;anticodon=(pos:198298..198300);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS18685;product=tRNA-Gly NZ_NPMD01000008.1 RefSeq gene 198497 198572 . + . ID=gene-CCO34_RS18690;Name=CCO34_RS18690;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO34_RS18690;old_locus_tag=CCO34_18685 NZ_NPMD01000008.1 tRNAscan-SE tRNA 198497 198572 . + . ID=rna-CCO34_RS18690;Parent=gene-CCO34_RS18690;anticodon=(pos:198530..198532);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS18690;product=tRNA-Gly NZ_NPMD01000008.1 tRNAscan-SE exon 198497 198572 . + . ID=exon-CCO34_RS18690-1;Parent=rna-CCO34_RS18690;anticodon=(pos:198530..198532);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO34_RS18690;product=tRNA-Gly NZ_NPMD01000008.1 RefSeq gene 198842 199981 . - . ID=gene-CCO34_RS18695;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CCO34_RS18695;old_locus_tag=CCO34_18690 NZ_NPMD01000008.1 Protein Homology CDS 198842 199981 . - 0 ID=cds-WP_001670426.1;Parent=gene-CCO34_RS18695;Dbxref=GenBank:WP_001670426.1;Name=WP_001670426.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=CCO34_RS18695;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001670426.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 199980 201527 . + . ID=gene-CCO34_RS18700;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=CCO34_RS18700;old_locus_tag=CCO34_18695 NZ_NPMD01000008.1 Protein Homology CDS 199980 201527 . + 0 ID=cds-WP_000968675.1;Parent=gene-CCO34_RS18700;Dbxref=GenBank:WP_000968675.1;Name=WP_000968675.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=CCO34_RS18700;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968675.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 201499 201960 . + . ID=gene-CCO34_RS18705;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CCO34_RS18705;old_locus_tag=CCO34_18700 NZ_NPMD01000008.1 Protein Homology CDS 201499 201960 . + 0 ID=cds-WP_000981984.1;Parent=gene-CCO34_RS18705;Dbxref=GenBank:WP_000981984.1;Name=WP_000981984.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=CCO34_RS18705;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 201977 203299 . + . ID=gene-CCO34_RS18710;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=CCO34_RS18710;old_locus_tag=CCO34_18705 NZ_NPMD01000008.1 Protein Homology CDS 201977 203299 . + 0 ID=cds-WP_000640355.1;Parent=gene-CCO34_RS18710;Dbxref=GenBank:WP_000640355.1;Name=WP_000640355.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=CCO34_RS18710;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640355.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 203309 205165 . + . ID=gene-CCO34_RS18715;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CCO34_RS18715;old_locus_tag=CCO34_18710 NZ_NPMD01000008.1 Protein Homology CDS 203309 205165 . + 0 ID=cds-WP_001122556.1;Parent=gene-CCO34_RS18715;Dbxref=GenBank:WP_001122556.1;Name=WP_001122556.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=CCO34_RS18715;product=DNA mismatch repair endonuclease MutL;protein_id=WP_001122556.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 205158 206108 . + . ID=gene-CCO34_RS18720;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CCO34_RS18720;old_locus_tag=CCO34_18715 NZ_NPMD01000008.1 Protein Homology CDS 205158 206108 . + 0 ID=cds-WP_001000734.1;Parent=gene-CCO34_RS18720;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=CCO34_RS18720;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 206191 206499 . + . ID=gene-CCO34_RS18725;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CCO34_RS18725;old_locus_tag=CCO34_18720 NZ_NPMD01000008.1 Protein Homology CDS 206191 206499 . + 0 ID=cds-WP_001051875.1;Parent=gene-CCO34_RS18725;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=CCO34_RS18725;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 206571 207851 . + . ID=gene-CCO34_RS18730;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CCO34_RS18730;old_locus_tag=CCO34_18725 NZ_NPMD01000008.1 Protein Homology CDS 206571 207851 . + 0 ID=cds-WP_000460338.1;Parent=gene-CCO34_RS18730;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=CCO34_RS18730;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 208066 209325 . + . ID=gene-CCO34_RS18735;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=CCO34_RS18735;old_locus_tag=CCO34_18730 NZ_NPMD01000008.1 Protein Homology CDS 208066 209325 . + 0 ID=cds-WP_000312505.1;Parent=gene-CCO34_RS18735;Dbxref=GenBank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=CCO34_RS18735;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 209328 210332 . + . ID=gene-CCO34_RS18740;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=CCO34_RS18740;old_locus_tag=CCO34_18735 NZ_NPMD01000008.1 Protein Homology CDS 209328 210332 . + 0 ID=cds-WP_001232417.1;Parent=gene-CCO34_RS18740;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=CCO34_RS18740;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 210411 210608 . + . ID=gene-CCO34_RS18745;Name=CCO34_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18745;old_locus_tag=CCO34_18740 NZ_NPMD01000008.1 Protein Homology CDS 210411 210608 . + 0 ID=cds-WP_001089290.1;Parent=gene-CCO34_RS18745;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=CCO34_RS18745;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 210711 212009 . + . ID=gene-CCO34_RS18750;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=CCO34_RS18750;old_locus_tag=CCO34_18745 NZ_NPMD01000008.1 Protein Homology CDS 210711 212009 . + 0 ID=cds-WP_000527976.1;Parent=gene-CCO34_RS18750;Dbxref=GenBank:WP_000527976.1;Name=WP_000527976.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=CCO34_RS18750;product=adenylosuccinate synthase;protein_id=WP_000527976.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 212229 212654 . + . ID=gene-CCO34_RS18760;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=CCO34_RS18760;old_locus_tag=CCO34_18755 NZ_NPMD01000008.1 Protein Homology CDS 212229 212654 . + 0 ID=cds-WP_001177632.1;Parent=gene-CCO34_RS18760;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=CCO34_RS18760;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 212692 215130 . + . ID=gene-CCO34_RS18765;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CCO34_RS18765;old_locus_tag=CCO34_18760 NZ_NPMD01000008.1 Protein Homology CDS 212692 215130 . + 0 ID=cds-WP_000076354.1;Parent=gene-CCO34_RS18765;Dbxref=GenBank:WP_000076354.1;Name=WP_000076354.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=CCO34_RS18765;product=ribonuclease R;protein_id=WP_000076354.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 215221 215952 . + . ID=gene-CCO34_RS18770;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CCO34_RS18770;old_locus_tag=CCO34_18765 NZ_NPMD01000008.1 Protein Homology CDS 215221 215952 . + 0 ID=cds-WP_001293277.1;Parent=gene-CCO34_RS18770;Dbxref=GenBank:WP_001293277.1;Name=WP_001293277.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=CCO34_RS18770;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293277.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 216084 216488 . + . ID=gene-CCO34_RS18775;Name=CCO34_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18775;old_locus_tag=CCO34_18770 NZ_NPMD01000008.1 Protein Homology CDS 216084 216488 . + 0 ID=cds-WP_000312605.1;Parent=gene-CCO34_RS18775;Dbxref=GenBank:WP_000312605.1;Name=WP_000312605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=CCO34_RS18775;product=YjfI family protein;protein_id=WP_000312605.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 216503 217201 . + . ID=gene-CCO34_RS18780;Name=CCO34_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18780;old_locus_tag=CCO34_18775 NZ_NPMD01000008.1 Protein Homology CDS 216503 217201 . + 0 ID=cds-WP_000511981.1;Parent=gene-CCO34_RS18780;Dbxref=GenBank:WP_000511981.1;Name=WP_000511981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=CCO34_RS18780;product=PspA/IM30 family protein;protein_id=WP_000511981.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 217201 218271 . + . ID=gene-CCO34_RS18785;Name=CCO34_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18785;old_locus_tag=CCO34_18780 NZ_NPMD01000008.1 Protein Homology CDS 217201 218271 . + 0 ID=cds-WP_000899675.1;Parent=gene-CCO34_RS18785;Dbxref=GenBank:WP_000899675.1;Name=WP_000899675.1;Ontology_term=GO:0034220,GO:0071805,GO:0005216,GO:0005267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic ion channel activity|0005216||IEA,potassium channel activity|0005267||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA,potassium ion transmembrane transport|0071805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=CCO34_RS18785;product=potassium channel family protein;protein_id=WP_000899675.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 218244 218927 . + . ID=gene-CCO34_RS18790;Name=CCO34_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18790;old_locus_tag=CCO34_18785 NZ_NPMD01000008.1 Protein Homology CDS 218244 218927 . + 0 ID=cds-WP_000090290.1;Parent=gene-CCO34_RS18790;Dbxref=GenBank:WP_000090290.1;Name=WP_000090290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=CCO34_RS18790;product=YjfK family protein;protein_id=WP_000090290.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 218945 219343 . + . ID=gene-CCO34_RS18795;Name=CCO34_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18795;old_locus_tag=CCO34_18790 NZ_NPMD01000008.1 Protein Homology CDS 218945 219343 . + 0 ID=cds-WP_000547737.1;Parent=gene-CCO34_RS18795;Dbxref=GenBank:WP_000547737.1;Name=WP_000547737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=CCO34_RS18795;product=DUF350 domain-containing protein;protein_id=WP_000547737.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 219353 219991 . + . ID=gene-CCO34_RS18800;Name=CCO34_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18800;old_locus_tag=CCO34_18795 NZ_NPMD01000008.1 Protein Homology CDS 219353 219991 . + 0 ID=cds-WP_001085595.1;Parent=gene-CCO34_RS18800;Dbxref=GenBank:WP_001085595.1;Name=WP_001085595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=CCO34_RS18800;product=DUF1190 domain-containing protein;protein_id=WP_001085595.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 219994 221157 . + . ID=gene-CCO34_RS18805;Name=CCO34_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18805;old_locus_tag=CCO34_18800 NZ_NPMD01000008.1 Protein Homology CDS 219994 221157 . + 0 ID=cds-WP_000943948.1;Parent=gene-CCO34_RS18805;Dbxref=GenBank:WP_000943948.1;Name=WP_000943948.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=CCO34_RS18805;product=glutathionylspermidine synthase family protein;protein_id=WP_000943948.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 221242 222864 . + . ID=gene-CCO34_RS18810;Name=CCO34_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18810;old_locus_tag=CCO34_18805 NZ_NPMD01000008.1 Protein Homology CDS 221242 222864 . + 0 ID=cds-WP_000118970.1;Parent=gene-CCO34_RS18810;Dbxref=GenBank:WP_000118970.1;Name=WP_000118970.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=CCO34_RS18810;product=isovaleryl-CoA dehydrogenase;protein_id=WP_000118970.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 222942 223217 . - . ID=gene-CCO34_RS18815;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=CCO34_RS18815;old_locus_tag=CCO34_18810 NZ_NPMD01000008.1 Protein Homology CDS 222942 223217 . - 0 ID=cds-WP_001518964.1;Parent=gene-CCO34_RS18815;Dbxref=GenBank:WP_001518964.1;Name=WP_001518964.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=CCO34_RS18815;product=DUF1471 family protease activator YjfN;protein_id=WP_001518964.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 223348 223677 . - . ID=gene-CCO34_RS18820;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=CCO34_RS18820;old_locus_tag=CCO34_18815 NZ_NPMD01000008.1 Protein Homology CDS 223348 223677 . - 0 ID=cds-WP_000586835.1;Parent=gene-CCO34_RS18820;Dbxref=GenBank:WP_000586835.1;Name=WP_000586835.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=CCO34_RS18820;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586835.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 223861 224610 . + . ID=gene-CCO34_RS18825;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=CCO34_RS18825;old_locus_tag=CCO34_18820 NZ_NPMD01000008.1 Protein Homology CDS 223861 224610 . + 0 ID=cds-WP_000560303.1;Parent=gene-CCO34_RS18825;Dbxref=GenBank:WP_000560303.1;Name=WP_000560303.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=CCO34_RS18825;product=esterase;protein_id=WP_000560303.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 224607 225362 . - . ID=gene-CCO34_RS18830;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=CCO34_RS18830;old_locus_tag=CCO34_18825 NZ_NPMD01000008.1 Protein Homology CDS 224607 225362 . - 0 ID=cds-WP_000133618.1;Parent=gene-CCO34_RS18830;Dbxref=GenBank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=CCO34_RS18830;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 225467 226531 . - . ID=gene-CCO34_RS18835;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CCO34_RS18835;old_locus_tag=CCO34_18830 NZ_NPMD01000008.1 Protein Homology CDS 225467 226531 . - 0 ID=cds-WP_000049164.1;Parent=gene-CCO34_RS18835;Dbxref=GenBank:WP_000049164.1;Name=WP_000049164.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=CCO34_RS18835;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049164.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 226894 228291 . + . ID=gene-CCO34_RS18840;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=CCO34_RS18840;old_locus_tag=CCO34_18835 NZ_NPMD01000008.1 Protein Homology CDS 226894 228291 . + 0 ID=cds-WP_000404873.1;Parent=gene-CCO34_RS18840;Dbxref=GenBank:WP_000404873.1;Name=WP_000404873.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=CCO34_RS18840;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404873.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 228307 228612 . + . ID=gene-CCO34_RS18845;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=CCO34_RS18845;old_locus_tag=CCO34_18840 NZ_NPMD01000008.1 Protein Homology CDS 228307 228612 . + 0 ID=cds-WP_000218357.1;Parent=gene-CCO34_RS18845;Dbxref=GenBank:WP_000218357.1;Name=WP_000218357.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=CCO34_RS18845;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218357.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 228622 229086 . + . ID=gene-CCO34_RS18850;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=CCO34_RS18850;old_locus_tag=CCO34_18845 NZ_NPMD01000008.1 Protein Homology CDS 228622 229086 . + 0 ID=cds-WP_000776531.1;Parent=gene-CCO34_RS18850;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=CCO34_RS18850;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 229100 229750 . + . ID=gene-CCO34_RS18855;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO34_RS18855;old_locus_tag=CCO34_18850 NZ_NPMD01000008.1 Protein Homology CDS 229100 229750 . + 0 ID=cds-WP_000056761.1;Parent=gene-CCO34_RS18855;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=CCO34_RS18855;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 229760 230614 . + . ID=gene-CCO34_RS18860;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=CCO34_RS18860;old_locus_tag=CCO34_18855 NZ_NPMD01000008.1 Protein Homology CDS 229760 230614 . + 0 ID=cds-WP_000949530.1;Parent=gene-CCO34_RS18860;Dbxref=GenBank:WP_000949530.1;Name=WP_000949530.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=CCO34_RS18860;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949530.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 230614 231300 . + . ID=gene-CCO34_RS18865;Name=CCO34_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18865;old_locus_tag=CCO34_18860 NZ_NPMD01000008.1 Protein Homology CDS 230614 231300 . + 0 ID=cds-WP_001170767.1;Parent=gene-CCO34_RS18865;Dbxref=GenBank:WP_001170767.1;Name=WP_001170767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=CCO34_RS18865;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170767.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 231429 231704 . - . ID=gene-CCO34_RS18870;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=CCO34_RS18870;old_locus_tag=CCO34_18865 NZ_NPMD01000008.1 Protein Homology CDS 231429 231704 . - 0 ID=cds-WP_023195975.1;Parent=gene-CCO34_RS18870;Dbxref=GenBank:WP_023195975.1;Name=WP_023195975.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463250.1;locus_tag=CCO34_RS18870;product=DUF1471 family protein YjfY;protein_id=WP_023195975.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 231898 232104 . + . ID=gene-CCO34_RS18880;Name=CCO34_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18880;old_locus_tag=CCO34_18875 NZ_NPMD01000008.1 Protein Homology CDS 231898 232104 . + 0 ID=cds-WP_077908641.1;Parent=gene-CCO34_RS18880;Dbxref=GenBank:WP_077908641.1;Name=WP_077908641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463251.1;locus_tag=CCO34_RS18880;product=hypothetical protein;protein_id=WP_077908641.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 232175 232570 . + . ID=gene-CCO34_RS18890;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CCO34_RS18890;old_locus_tag=CCO34_18885 NZ_NPMD01000008.1 Protein Homology CDS 232175 232570 . + 0 ID=cds-WP_001216673.1;Parent=gene-CCO34_RS18890;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=CCO34_RS18890;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 232577 232891 . + . ID=gene-CCO34_RS18895;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=CCO34_RS18895;old_locus_tag=CCO34_18890 NZ_NPMD01000008.1 Protein Homology CDS 232577 232891 . + 0 ID=cds-WP_001519453.1;Parent=gene-CCO34_RS18895;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=CCO34_RS18895;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 232896 233123 . + . ID=gene-CCO34_RS18900;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CCO34_RS18900;old_locus_tag=CCO34_18895 NZ_NPMD01000008.1 Protein Homology CDS 232896 233123 . + 0 ID=cds-WP_000135199.1;Parent=gene-CCO34_RS18900;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=CCO34_RS18900;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 233165 233614 . + . ID=gene-CCO34_RS18905;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CCO34_RS18905;old_locus_tag=CCO34_18900 NZ_NPMD01000008.1 Protein Homology CDS 233165 233614 . + 0 ID=cds-WP_001196059.1;Parent=gene-CCO34_RS18905;Dbxref=GenBank:WP_001196059.1;Name=WP_001196059.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=CCO34_RS18905;product=50S ribosomal protein L9;protein_id=WP_001196059.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 233762 234688 . + . ID=gene-CCO34_RS18910;Name=CCO34_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18910;old_locus_tag=CCO34_18905 NZ_NPMD01000008.1 Protein Homology CDS 233762 234688 . + 0 ID=cds-WP_000381068.1;Parent=gene-CCO34_RS18910;Dbxref=GenBank:WP_000381068.1;Name=WP_000381068.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=CCO34_RS18910;product=DMT family transporter;protein_id=WP_000381068.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 234738 235373 . - . ID=gene-CCO34_RS18915;Name=CCO34_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18915;old_locus_tag=CCO34_18910 NZ_NPMD01000008.1 Protein Homology CDS 234738 235373 . - 0 ID=cds-WP_001119451.1;Parent=gene-CCO34_RS18915;Dbxref=GenBank:WP_001119451.1;Name=WP_001119451.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=CCO34_RS18915;product=LysM-like peptidoglycan-binding domain-containing protein;protein_id=WP_001119451.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 235593 236213 . + . ID=gene-CCO34_RS18920;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=CCO34_RS18920;old_locus_tag=CCO34_18915 NZ_NPMD01000008.1 Protein Homology CDS 235593 236213 . + 0 ID=cds-WP_000235161.1;Parent=gene-CCO34_RS18920;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=CCO34_RS18920;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 236509 237918 . + . ID=gene-CCO34_RS18925;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=CCO34_RS18925;old_locus_tag=CCO34_18920 NZ_NPMD01000008.1 Protein Homology CDS 236509 237918 . + 0 ID=cds-WP_000228322.1;Parent=gene-CCO34_RS18925;Dbxref=GenBank:WP_000228322.1;Name=WP_000228322.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=CCO34_RS18925;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228322.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 238030 238692 . - . ID=gene-CCO34_RS18930;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=CCO34_RS18930;old_locus_tag=CCO34_18925 NZ_NPMD01000008.1 Protein Homology CDS 238030 238692 . - 0 ID=cds-WP_000331471.1;Parent=gene-CCO34_RS18930;Dbxref=GenBank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=CCO34_RS18930;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 238795 239760 . - . ID=gene-CCO34_RS18935;Name=CCO34_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18935;old_locus_tag=CCO34_18930 NZ_NPMD01000008.1 Protein Homology CDS 238795 239760 . - 0 ID=cds-WP_000623290.1;Parent=gene-CCO34_RS18935;Dbxref=GenBank:WP_000623290.1;Name=WP_000623290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=CCO34_RS18935;product=DMT family transporter;protein_id=WP_000623290.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 239841 240689 . - . ID=gene-CCO34_RS18940;Name=CCO34_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18940;old_locus_tag=CCO34_18935 NZ_NPMD01000008.1 Protein Homology CDS 239841 240689 . - 0 ID=cds-WP_000560616.1;Parent=gene-CCO34_RS18940;Dbxref=GenBank:WP_000560616.1;Name=WP_000560616.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=CCO34_RS18940;product=SDR family oxidoreductase;protein_id=WP_000560616.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 240777 241163 . + . ID=gene-CCO34_RS18945;Name=CCO34_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18945;old_locus_tag=CCO34_18940 NZ_NPMD01000008.1 Protein Homology CDS 240777 241163 . + 0 ID=cds-WP_001201297.1;Parent=gene-CCO34_RS18945;Dbxref=GenBank:WP_001201297.1;Name=WP_001201297.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=CCO34_RS18945;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201297.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 241221 243164 . - . ID=gene-CCO34_RS18950;Name=CCO34_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18950;old_locus_tag=CCO34_18945 NZ_NPMD01000008.1 Protein Homology CDS 241221 243164 . - 0 ID=cds-WP_080180938.1;Parent=gene-CCO34_RS18950;Dbxref=GenBank:WP_080180938.1;Name=WP_080180938.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=CCO34_RS18950;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_080180938.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 243432 244172 . + . ID=gene-CCO34_RS18960;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=CCO34_RS18960;old_locus_tag=CCO34_18955 NZ_NPMD01000008.1 Protein Homology CDS 243432 244172 . + 0 ID=cds-WP_000893398.1;Parent=gene-CCO34_RS18960;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=CCO34_RS18960;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 244162 244719 . - . ID=gene-CCO34_RS18965;Name=CCO34_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18965;old_locus_tag=CCO34_18960 NZ_NPMD01000008.1 Protein Homology CDS 244162 244719 . - 0 ID=cds-WP_000175301.1;Parent=gene-CCO34_RS18965;Dbxref=GenBank:WP_000175301.1;Name=WP_000175301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=CCO34_RS18965;product=YtfJ family protein;protein_id=WP_000175301.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 245046 245252 . + . ID=gene-CCO34_RS18975;Name=CCO34_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18975;old_locus_tag=CCO34_18970 NZ_NPMD01000008.1 Protein Homology CDS 245046 245252 . + 0 ID=cds-WP_000689229.1;Parent=gene-CCO34_RS18975;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=CCO34_RS18975;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 245337 246680 . - . ID=gene-CCO34_RS18980;Name=CCO34_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS18980;old_locus_tag=CCO34_18975 NZ_NPMD01000008.1 Protein Homology CDS 245337 246680 . - 0 ID=cds-WP_000934972.1;Parent=gene-CCO34_RS18980;Dbxref=GenBank:WP_000934972.1;Name=WP_000934972.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=CCO34_RS18980;product=hemolysin family protein;protein_id=WP_000934972.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 246863 247501 . - . ID=gene-CCO34_RS18985;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CCO34_RS18985;old_locus_tag=CCO34_18980 NZ_NPMD01000008.1 Protein Homology CDS 246863 247501 . - 0 ID=cds-WP_000051472.1;Parent=gene-CCO34_RS18985;Dbxref=GenBank:WP_000051472.1;Name=WP_000051472.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=CCO34_RS18985;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_000051472.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 247714 249447 . + . ID=gene-CCO34_RS18990;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=CCO34_RS18990;old_locus_tag=CCO34_18985 NZ_NPMD01000008.1 Protein Homology CDS 247714 249447 . + 0 ID=cds-WP_001120235.1;Parent=gene-CCO34_RS18990;Dbxref=GenBank:WP_001120235.1;Name=WP_001120235.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=CCO34_RS18990;product=autotransporter assembly complex protein TamA;protein_id=WP_001120235.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 249444 253223 . + . ID=gene-CCO34_RS18995;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=CCO34_RS18995;old_locus_tag=CCO34_18990 NZ_NPMD01000008.1 Protein Homology CDS 249444 253223 . + 0 ID=cds-WP_094965504.1;Parent=gene-CCO34_RS18995;Dbxref=GenBank:WP_094965504.1;Name=WP_094965504.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=CCO34_RS18995;product=autotransporter assembly complex protein TamB;protein_id=WP_094965504.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 253226 253570 . + . ID=gene-CCO34_RS19000;Name=CCO34_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19000;old_locus_tag=CCO34_18995 NZ_NPMD01000008.1 Protein Homology CDS 253226 253570 . + 0 ID=cds-WP_001219167.1;Parent=gene-CCO34_RS19000;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=CCO34_RS19000;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 253870 254151 . + . ID=gene-CCO34_RS19010;Name=CCO34_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19010;old_locus_tag=CCO34_19005 NZ_NPMD01000008.1 Protein Homology CDS 253870 254151 . + 0 ID=cds-WP_094965506.1;Parent=gene-CCO34_RS19010;Dbxref=GenBank:WP_094965506.1;Name=WP_094965506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_305382.1;locus_tag=CCO34_RS19010;product=hypothetical protein;protein_id=WP_094965506.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 254307 254447 . - . ID=gene-CCO34_RS19015;Name=CCO34_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19015;old_locus_tag=CCO34_19010 NZ_NPMD01000008.1 Protein Homology CDS 254307 254447 . - 0 ID=cds-WP_000078915.1;Parent=gene-CCO34_RS19015;Dbxref=GenBank:WP_000078915.1;Name=WP_000078915.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078918.1;locus_tag=CCO34_RS19015;product=Hok/Gef family protein;protein_id=WP_000078915.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 255276 256973 . - . ID=gene-CCO34_RS19025;Name=CCO34_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19025;old_locus_tag=CCO34_19020 NZ_NPMD01000008.1 Protein Homology CDS 255276 256973 . - 0 ID=cds-WP_094965508.1;Parent=gene-CCO34_RS19025;Dbxref=GenBank:WP_094965508.1;Name=WP_094965508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767297.1;locus_tag=CCO34_RS19025;product=hypothetical protein;protein_id=WP_094965508.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 256970 257545 . - . ID=gene-CCO34_RS19030;Name=CCO34_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19030;old_locus_tag=CCO34_19025 NZ_NPMD01000008.1 Protein Homology CDS 256970 257545 . - 0 ID=cds-WP_080171618.1;Parent=gene-CCO34_RS19030;Dbxref=GenBank:WP_080171618.1;Name=WP_080171618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192895.1;locus_tag=CCO34_RS19030;product=hypothetical protein;protein_id=WP_080171618.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 257517 258230 . - . ID=gene-CCO34_RS19035;Name=CCO34_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19035;old_locus_tag=CCO34_19030 NZ_NPMD01000008.1 Protein Homology CDS 257517 258230 . - 0 ID=cds-WP_080171619.1;Parent=gene-CCO34_RS19035;Dbxref=GenBank:WP_080171619.1;Name=WP_080171619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000870770.1;locus_tag=CCO34_RS19035;product=hypothetical protein;protein_id=WP_080171619.1;transl_table=11 NZ_NPMD01000008.1 RefSeq gene 258227 258808 . - . ID=gene-CCO34_RS19040;Name=CCO34_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19040;old_locus_tag=CCO34_19035 NZ_NPMD01000008.1 Protein Homology CDS 258227 258808 . - 0 ID=cds-WP_094965509.1;Parent=gene-CCO34_RS19040;Dbxref=GenBank:WP_094965509.1;Name=WP_094965509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701870.1;locus_tag=CCO34_RS19040;product=DUF4376 domain-containing protein;protein_id=WP_094965509.1;transl_table=11 ##sequence-region NZ_NPMD01000009.1 1 224028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=149385 NZ_NPMD01000009.1 RefSeq region 1 224028 . + . ID=NZ_NPMD01000009.1:1..224028;Dbxref=taxon:149385;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Hadar;strain=CFSAN059886;sub-species=enterica NZ_NPMD01000009.1 RefSeq pseudogene 1 535 . - . ID=gene-CCO34_RS19045;Name=CCO34_RS19045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS19045;old_locus_tag=CCO34_19040;partial=true;pseudo=true;start_range=.,1 NZ_NPMD01000009.1 Protein Homology CDS 1 535 . - 0 ID=cds-CCO34_RS19045;Parent=gene-CCO34_RS19045;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO34_RS19045;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 552 791 . - . ID=gene-CCO34_RS19050;Name=CCO34_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19050;old_locus_tag=CCO34_19045 NZ_NPMD01000009.1 Protein Homology CDS 552 791 . - 0 ID=cds-WP_001001150.1;Parent=gene-CCO34_RS19050;Dbxref=GenBank:WP_001001150.1;Name=WP_001001150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=CCO34_RS19050;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001001150.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 950 2290 . - . ID=gene-CCO34_RS19055;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=CCO34_RS19055;old_locus_tag=CCO34_19050 NZ_NPMD01000009.1 Protein Homology CDS 950 2290 . - 0 ID=cds-WP_000183602.1;Parent=gene-CCO34_RS19055;Dbxref=GenBank:WP_000183602.1;Name=WP_000183602.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=CCO34_RS19055;product=citrate/sodium symporter CitS;protein_id=WP_000183602.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 2535 3578 . + . ID=gene-CCO34_RS19060;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO34_RS19060;old_locus_tag=CCO34_19055 NZ_NPMD01000009.1 Protein Homology CDS 2535 3578 . + 0 ID=cds-WP_001181438.1;Parent=gene-CCO34_RS19060;Dbxref=GenBank:WP_001181438.1;Name=WP_001181438.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=CCO34_RS19060;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_001181438.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 3608 3901 . + . ID=gene-CCO34_RS19065;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO34_RS19065;old_locus_tag=CCO34_19060 NZ_NPMD01000009.1 Protein Homology CDS 3608 3901 . + 0 ID=cds-WP_000691461.1;Parent=gene-CCO34_RS19065;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=CCO34_RS19065;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 3898 4767 . + . ID=gene-CCO34_RS19070;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO34_RS19070;old_locus_tag=CCO34_19065 NZ_NPMD01000009.1 Protein Homology CDS 3898 4767 . + 0 ID=cds-WP_001247811.1;Parent=gene-CCO34_RS19070;Dbxref=GenBank:WP_001247811.1;Name=WP_001247811.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=CCO34_RS19070;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001247811.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 4778 6298 . + . ID=gene-CCO34_RS19075;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO34_RS19075;old_locus_tag=CCO34_19070 NZ_NPMD01000009.1 Protein Homology CDS 4778 6298 . + 0 ID=cds-WP_000665572.1;Parent=gene-CCO34_RS19075;Dbxref=GenBank:WP_000665572.1;Name=WP_000665572.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=CCO34_RS19075;product=citrate lyase subunit alpha;protein_id=WP_000665572.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 6298 6849 . + . ID=gene-CCO34_RS19080;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO34_RS19080;old_locus_tag=CCO34_19075 NZ_NPMD01000009.1 Protein Homology CDS 6298 6849 . + 0 ID=cds-WP_000679050.1;Parent=gene-CCO34_RS19080;Dbxref=GenBank:WP_000679050.1;Name=WP_000679050.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=CCO34_RS19080;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000679050.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 6827 7735 . + . ID=gene-CCO34_RS19085;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO34_RS19085;old_locus_tag=CCO34_19080 NZ_NPMD01000009.1 Protein Homology CDS 6827 7735 . + 0 ID=cds-WP_001103238.1;Parent=gene-CCO34_RS19085;Dbxref=GenBank:WP_001103238.1;Name=WP_001103238.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=CCO34_RS19085;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_001103238.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 7915 8736 . + . ID=gene-CCO34_RS19090;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CCO34_RS19090;old_locus_tag=CCO34_19085 NZ_NPMD01000009.1 Protein Homology CDS 7915 8736 . + 0 ID=cds-WP_000544030.1;Parent=gene-CCO34_RS19090;Dbxref=GenBank:WP_000544030.1;Name=WP_000544030.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=CCO34_RS19090;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544030.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 8862 9128 . - . ID=gene-CCO34_RS25880;Name=CCO34_RS25880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25880 NZ_NPMD01000009.1 GeneMarkS-2+ CDS 8862 9128 . - 0 ID=cds-WP_000355347.1;Parent=gene-CCO34_RS25880;Dbxref=GenBank:WP_000355347.1;Name=WP_000355347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25880;product=hypothetical protein;protein_id=WP_000355347.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 9766 10914 . + . ID=gene-CCO34_RS19100;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=CCO34_RS19100;old_locus_tag=CCO34_19095 NZ_NPMD01000009.1 Protein Homology CDS 9766 10914 . + 0 ID=cds-WP_000597282.1;Parent=gene-CCO34_RS19100;Dbxref=GenBank:WP_000597282.1;Name=WP_000597282.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=CCO34_RS19100;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597282.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 10933 14160 . + . ID=gene-CCO34_RS19105;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CCO34_RS19105;old_locus_tag=CCO34_19100 NZ_NPMD01000009.1 Protein Homology CDS 10933 14160 . + 0 ID=cds-WP_001126310.1;Parent=gene-CCO34_RS19105;Dbxref=GenBank:WP_001126310.1;Name=WP_001126310.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=CCO34_RS19105;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126310.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 14434 14829 . + . ID=gene-CCO34_RS19110;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=CCO34_RS19110;old_locus_tag=CCO34_19105 NZ_NPMD01000009.1 Protein Homology CDS 14434 14829 . + 0 ID=cds-WP_000333324.1;Parent=gene-CCO34_RS19110;Dbxref=GenBank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=CCO34_RS19110;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 14907 15503 . - . ID=gene-CCO34_RS19115;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=CCO34_RS19115;old_locus_tag=CCO34_19110 NZ_NPMD01000009.1 Protein Homology CDS 14907 15503 . - 0 ID=cds-WP_000122863.1;Parent=gene-CCO34_RS19115;Dbxref=GenBank:WP_000122863.1;Name=WP_000122863.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=CCO34_RS19115;product=carnitine operon protein CaiE;protein_id=WP_000122863.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 15613 16398 . - . ID=gene-CCO34_RS19120;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=CCO34_RS19120;old_locus_tag=CCO34_19115 NZ_NPMD01000009.1 Protein Homology CDS 15613 16398 . - 0 ID=cds-WP_000004383.1;Parent=gene-CCO34_RS19120;Dbxref=GenBank:WP_000004383.1;Name=WP_000004383.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO34_RS19120;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004383.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 16452 18005 . - . ID=gene-CCO34_RS19125;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=CCO34_RS19125;old_locus_tag=CCO34_19120 NZ_NPMD01000009.1 Protein Homology CDS 16452 18005 . - 0 ID=cds-WP_000355805.1;Parent=gene-CCO34_RS19125;Dbxref=GenBank:WP_000355805.1;Name=WP_000355805.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=CCO34_RS19125;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_000355805.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 18068 19285 . - . ID=gene-CCO34_RS19130;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=CCO34_RS19130;old_locus_tag=CCO34_19125 NZ_NPMD01000009.1 Protein Homology CDS 18068 19285 . - 0 ID=cds-WP_001016212.1;Parent=gene-CCO34_RS19130;Dbxref=GenBank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=CCO34_RS19130;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 19397 20539 . - . ID=gene-CCO34_RS19135;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=CCO34_RS19135;old_locus_tag=CCO34_19130 NZ_NPMD01000009.1 Protein Homology CDS 19397 20539 . - 0 ID=cds-WP_000347134.1;Parent=gene-CCO34_RS19135;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=CCO34_RS19135;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 20574 22091 . - . ID=gene-CCO34_RS19140;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=CCO34_RS19140;old_locus_tag=CCO34_19135 NZ_NPMD01000009.1 Protein Homology CDS 20574 22091 . - 0 ID=cds-WP_000787073.1;Parent=gene-CCO34_RS19140;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=CCO34_RS19140;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 22572 23342 . + . ID=gene-CCO34_RS19145;Name=CCO34_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19145;old_locus_tag=CCO34_19140 NZ_NPMD01000009.1 Protein Homology CDS 22572 23342 . + 0 ID=cds-WP_000692185.1;Parent=gene-CCO34_RS19145;Dbxref=GenBank:WP_000692185.1;Name=WP_000692185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=CCO34_RS19145;product=electron transfer flavoprotein FixA;protein_id=WP_000692185.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 23358 24299 . + . ID=gene-CCO34_RS19150;Name=CCO34_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19150;old_locus_tag=CCO34_19145 NZ_NPMD01000009.1 Protein Homology CDS 23358 24299 . + 0 ID=cds-WP_001032195.1;Parent=gene-CCO34_RS19150;Dbxref=GenBank:WP_001032195.1;Name=WP_001032195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=CCO34_RS19150;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032195.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 24349 25635 . + . ID=gene-CCO34_RS19155;Name=CCO34_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19155;old_locus_tag=CCO34_19150 NZ_NPMD01000009.1 Protein Homology CDS 24349 25635 . + 0 ID=cds-WP_001287775.1;Parent=gene-CCO34_RS19155;Dbxref=GenBank:WP_001287775.1;Name=WP_001287775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=CCO34_RS19155;product=FAD-dependent oxidoreductase;protein_id=WP_001287775.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 25632 25919 . + . ID=gene-CCO34_RS19160;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=CCO34_RS19160;old_locus_tag=CCO34_19155 NZ_NPMD01000009.1 Protein Homology CDS 25632 25919 . + 0 ID=cds-WP_000203736.1;Parent=gene-CCO34_RS19160;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=CCO34_RS19160;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 26066 27406 . + . ID=gene-CCO34_RS19165;Name=CCO34_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19165;old_locus_tag=CCO34_19160 NZ_NPMD01000009.1 Protein Homology CDS 26066 27406 . + 0 ID=cds-WP_001187057.1;Parent=gene-CCO34_RS19165;Dbxref=GenBank:WP_001187057.1;Name=WP_001187057.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=CCO34_RS19165;product=MFS transporter;protein_id=WP_001187057.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 27495 27725 . + . ID=gene-CCO34_RS19170;Name=CCO34_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19170;old_locus_tag=CCO34_19165 NZ_NPMD01000009.1 Protein Homology CDS 27495 27725 . + 0 ID=cds-WP_001172089.1;Parent=gene-CCO34_RS19170;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=CCO34_RS19170;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 28025 28441 . + . ID=gene-CCO34_RS19175;Name=CCO34_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19175;old_locus_tag=CCO34_19170 NZ_NPMD01000009.1 Protein Homology CDS 28025 28441 . + 0 ID=cds-WP_162008108.1;Parent=gene-CCO34_RS19175;Dbxref=GenBank:WP_162008108.1;Name=WP_162008108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=CCO34_RS19175;product=hypothetical protein;protein_id=WP_162008108.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 28665 28955 . - . ID=gene-CCO34_RS19180;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=CCO34_RS19180;old_locus_tag=CCO34_19175 NZ_NPMD01000009.1 Protein Homology CDS 28665 28955 . - 0 ID=cds-WP_000745961.1;Parent=gene-CCO34_RS19180;Dbxref=GenBank:WP_000745961.1;Name=WP_000745961.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=CCO34_RS19180;product=DUF1471 family virulence protein SrfN;protein_id=WP_000745961.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 29853 31742 . + . ID=gene-CCO34_RS19195;Name=CCO34_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19195;old_locus_tag=CCO34_19190 NZ_NPMD01000009.1 Protein Homology CDS 29853 31742 . + 0 ID=cds-WP_000066324.1;Parent=gene-CCO34_RS19195;Dbxref=GenBank:WP_000066324.1;Name=WP_000066324.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=CCO34_RS19195;product=sulfatase-like hydrolase/transferase;protein_id=WP_000066324.1;transl_table=11 NZ_NPMD01000009.1 RefSeq pseudogene 32094 32174 . - . ID=gene-CCO34_RS26250;Name=CCO34_RS26250;end_range=32174,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS26250;partial=true;pseudo=true NZ_NPMD01000009.1 Protein Homology CDS 32094 32174 . - 0 ID=cds-CCO34_RS26250;Parent=gene-CCO34_RS26250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=32174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO34_RS26250;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 32296 32826 . + . ID=gene-CCO34_RS19210;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=CCO34_RS19210;old_locus_tag=CCO34_19205 NZ_NPMD01000009.1 Protein Homology CDS 32296 32826 . + 0 ID=cds-WP_000600706.1;Parent=gene-CCO34_RS19210;Dbxref=GenBank:WP_000600706.1;Name=WP_000600706.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=CCO34_RS19210;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600706.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 32819 34681 . + . ID=gene-CCO34_RS19215;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=CCO34_RS19215;old_locus_tag=CCO34_19210 NZ_NPMD01000009.1 Protein Homology CDS 32819 34681 . + 0 ID=cds-WP_000377163.1;Parent=gene-CCO34_RS19215;Dbxref=GenBank:WP_000377163.1;Name=WP_000377163.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=CCO34_RS19215;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377163.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 34880 35359 . + . ID=gene-CCO34_RS19220;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=CCO34_RS19220;old_locus_tag=CCO34_19215 NZ_NPMD01000009.1 Protein Homology CDS 34880 35359 . + 0 ID=cds-WP_000624379.1;Parent=gene-CCO34_RS19220;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=CCO34_RS19220;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 35465 36313 . - . ID=gene-CCO34_RS19225;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=CCO34_RS19225;old_locus_tag=CCO34_19220 NZ_NPMD01000009.1 Protein Homology CDS 35465 36313 . - 0 ID=cds-WP_000257211.1;Parent=gene-CCO34_RS19225;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=CCO34_RS19225;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 36324 36701 . - . ID=gene-CCO34_RS19230;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=CCO34_RS19230;old_locus_tag=CCO34_19225 NZ_NPMD01000009.1 Protein Homology CDS 36324 36701 . - 0 ID=cds-WP_000610894.1;Parent=gene-CCO34_RS19230;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=CCO34_RS19230;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 36704 37525 . - . ID=gene-CCO34_RS19235;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CCO34_RS19235;old_locus_tag=CCO34_19230 NZ_NPMD01000009.1 Protein Homology CDS 36704 37525 . - 0 ID=cds-WP_001065397.1;Parent=gene-CCO34_RS19235;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=CCO34_RS19235;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 37522 38511 . - . ID=gene-CCO34_RS19240;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=CCO34_RS19240;old_locus_tag=CCO34_19235 NZ_NPMD01000009.1 Protein Homology CDS 37522 38511 . - 0 ID=cds-WP_000093006.1;Parent=gene-CCO34_RS19240;Dbxref=GenBank:WP_000093006.1;Name=WP_000093006.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=CCO34_RS19240;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000093006.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 38511 39797 . - . ID=gene-CCO34_RS19245;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=CCO34_RS19245;old_locus_tag=CCO34_19240 NZ_NPMD01000009.1 Protein Homology CDS 38511 39797 . - 0 ID=cds-WP_000800482.1;Parent=gene-CCO34_RS19245;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=CCO34_RS19245;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 39851 42211 . - . ID=gene-CCO34_RS19250;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=CCO34_RS19250;old_locus_tag=CCO34_19245 NZ_NPMD01000009.1 Protein Homology CDS 39851 42211 . - 0 ID=cds-WP_000746119.1;Parent=gene-CCO34_RS19250;Dbxref=GenBank:WP_000746119.1;Name=WP_000746119.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=CCO34_RS19250;product=LPS assembly protein LptD;protein_id=WP_000746119.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 42465 43277 . + . ID=gene-CCO34_RS19255;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=CCO34_RS19255;old_locus_tag=CCO34_19250 NZ_NPMD01000009.1 Protein Homology CDS 42465 43277 . + 0 ID=cds-WP_001200595.1;Parent=gene-CCO34_RS19255;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=CCO34_RS19255;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 43372 44031 . - . ID=gene-CCO34_RS19260;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=CCO34_RS19260;old_locus_tag=CCO34_19255 NZ_NPMD01000009.1 Protein Homology CDS 43372 44031 . - 0 ID=cds-WP_000525196.1;Parent=gene-CCO34_RS19260;Dbxref=GenBank:WP_000525196.1;Name=WP_000525196.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=CCO34_RS19260;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525196.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 44043 46949 . - . ID=gene-CCO34_RS19265;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=CCO34_RS19265;old_locus_tag=CCO34_19260 NZ_NPMD01000009.1 Protein Homology CDS 44043 46949 . - 0 ID=cds-WP_001116966.1;Parent=gene-CCO34_RS19265;Dbxref=GenBank:WP_001116966.1;Name=WP_001116966.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=CCO34_RS19265;product=RNA polymerase-associated protein RapA;protein_id=WP_001116966.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 47123 49474 . - . ID=gene-CCO34_RS19270;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=CCO34_RS19270;old_locus_tag=CCO34_19265 NZ_NPMD01000009.1 Protein Homology CDS 47123 49474 . - 0 ID=cds-WP_000035711.1;Parent=gene-CCO34_RS19270;Dbxref=GenBank:WP_000035711.1;Name=WP_000035711.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=CCO34_RS19270;product=DNA polymerase II;protein_id=WP_000035711.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 49518 50138 . - . ID=gene-CCO34_RS19275;Name=CCO34_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19275;old_locus_tag=CCO34_19270 NZ_NPMD01000009.1 Protein Homology CDS 49518 50138 . - 0 ID=cds-WP_000877507.1;Parent=gene-CCO34_RS19275;Dbxref=GenBank:WP_000877507.1;Name=WP_000877507.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=CCO34_RS19275;product=YdcF family protein;protein_id=WP_000877507.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 50656 51075 . + . ID=gene-CCO34_RS19285;Name=CCO34_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19285;old_locus_tag=CCO34_19280 NZ_NPMD01000009.1 Protein Homology CDS 50656 51075 . + 0 ID=cds-WP_001103149.1;Parent=gene-CCO34_RS19285;Dbxref=GenBank:WP_001103149.1;Name=WP_001103149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=CCO34_RS19285;product=DUF4751 family protein;protein_id=WP_001103149.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 51081 51776 . - . ID=gene-CCO34_RS19290;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO34_RS19290;old_locus_tag=CCO34_19285 NZ_NPMD01000009.1 Protein Homology CDS 51081 51776 . - 0 ID=cds-WP_000888684.1;Parent=gene-CCO34_RS19290;Dbxref=GenBank:WP_000888684.1;Name=WP_000888684.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=CCO34_RS19290;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888684.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 51917 53419 . - . ID=gene-CCO34_RS19295;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=CCO34_RS19295;old_locus_tag=CCO34_19290 NZ_NPMD01000009.1 Protein Homology CDS 51917 53419 . - 0 ID=cds-WP_000151695.1;Parent=gene-CCO34_RS19295;Dbxref=GenBank:WP_000151695.1;Name=WP_000151695.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=CCO34_RS19295;product=L-arabinose isomerase;protein_id=WP_000151695.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 53430 55139 . - . ID=gene-CCO34_RS19300;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=CCO34_RS19300;old_locus_tag=CCO34_19295 NZ_NPMD01000009.1 Protein Homology CDS 53430 55139 . - 0 ID=cds-WP_000951814.1;Parent=gene-CCO34_RS19300;Dbxref=GenBank:WP_000951814.1;Name=WP_000951814.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=CCO34_RS19300;product=ribulokinase;protein_id=WP_000951814.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 55480 56325 . + . ID=gene-CCO34_RS19305;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=CCO34_RS19305;old_locus_tag=CCO34_19300 NZ_NPMD01000009.1 Protein Homology CDS 55480 56325 . + 0 ID=cds-WP_000852387.1;Parent=gene-CCO34_RS19305;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=CCO34_RS19305;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 56444 57211 . + . ID=gene-CCO34_RS19310;Name=CCO34_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19310;old_locus_tag=CCO34_19305 NZ_NPMD01000009.1 Protein Homology CDS 56444 57211 . + 0 ID=cds-WP_001148367.1;Parent=gene-CCO34_RS19310;Dbxref=GenBank:WP_001148367.1;Name=WP_001148367.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=CCO34_RS19310;product=DedA family protein;protein_id=WP_001148367.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 57250 57957 . - . ID=gene-CCO34_RS19315;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=CCO34_RS19315;old_locus_tag=CCO34_19310 NZ_NPMD01000009.1 Protein Homology CDS 57250 57957 . - 0 ID=cds-WP_000915977.1;Parent=gene-CCO34_RS19315;Dbxref=GenBank:WP_000915977.1;Name=WP_000915977.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915977.1;locus_tag=CCO34_RS19315;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000915977.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 57941 59551 . - . ID=gene-CCO34_RS19320;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=CCO34_RS19320;old_locus_tag=CCO34_19315 NZ_NPMD01000009.1 Protein Homology CDS 57941 59551 . - 0 ID=cds-WP_000235642.1;Parent=gene-CCO34_RS19320;Dbxref=GenBank:WP_000235642.1;Name=WP_000235642.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=CCO34_RS19320;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235642.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 59527 60510 . - . ID=gene-CCO34_RS19325;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=CCO34_RS19325;old_locus_tag=CCO34_19320 NZ_NPMD01000009.1 Protein Homology CDS 59527 60510 . - 0 ID=cds-WP_000915326.1;Parent=gene-CCO34_RS19325;Dbxref=GenBank:WP_000915326.1;Name=WP_000915326.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=CCO34_RS19325;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915326.1;transl_table=11 NZ_NPMD01000009.1 cmsearch riboswitch 60542 60641 . - . ID=id-NZ_NPMD01000009.1:60542..60641;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMD01000009.1 RefSeq gene 60688 62346 . - . ID=gene-CCO34_RS19330;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=CCO34_RS19330;old_locus_tag=CCO34_19325 NZ_NPMD01000009.1 Protein Homology CDS 60688 62346 . - 0 ID=cds-WP_001139045.1;Parent=gene-CCO34_RS19330;Dbxref=GenBank:WP_001139045.1;Name=WP_001139045.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=CCO34_RS19330;product=HTH-type transcriptional regulator SgrR;protein_id=WP_001139045.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 62439 62561 . + . ID=gene-CCO34_RS19335;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=CCO34_RS19335;old_locus_tag=CCO34_19330 NZ_NPMD01000009.1 Protein Homology CDS 62439 62561 . + 0 ID=cds-WP_001248755.1;Parent=gene-CCO34_RS19335;Dbxref=GenBank:WP_001248755.1;Name=WP_001248755.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=CCO34_RS19335;product=glucose uptake inhibitor SgrT;protein_id=WP_001248755.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 62897 63502 . - . ID=gene-CCO34_RS19340;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CCO34_RS19340;old_locus_tag=CCO34_19335 NZ_NPMD01000009.1 Protein Homology CDS 62897 63502 . - 0 ID=cds-WP_000818264.1;Parent=gene-CCO34_RS19340;Dbxref=GenBank:WP_000818264.1;Name=WP_000818264.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=CCO34_RS19340;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818264.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 63513 64913 . - . ID=gene-CCO34_RS19345;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CCO34_RS19345;old_locus_tag=CCO34_19340 NZ_NPMD01000009.1 Protein Homology CDS 63513 64913 . - 0 ID=cds-WP_001140630.1;Parent=gene-CCO34_RS19345;Dbxref=GenBank:WP_001140630.1;Name=WP_001140630.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=CCO34_RS19345;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140630.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 64916 66007 . - . ID=gene-CCO34_RS19350;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CCO34_RS19350;old_locus_tag=CCO34_19345 NZ_NPMD01000009.1 Protein Homology CDS 64916 66007 . - 0 ID=cds-WP_000042336.1;Parent=gene-CCO34_RS19350;Dbxref=GenBank:WP_000042336.1;Name=WP_000042336.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=CCO34_RS19350;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042336.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 66007 67578 . - . ID=gene-CCO34_RS19355;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=CCO34_RS19355;old_locus_tag=CCO34_19350 NZ_NPMD01000009.1 Protein Homology CDS 66007 67578 . - 0 ID=cds-WP_000082819.1;Parent=gene-CCO34_RS19355;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=CCO34_RS19355;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 67666 67752 . - . ID=gene-CCO34_RS19360;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=CCO34_RS19360;old_locus_tag=CCO34_19355 NZ_NPMD01000009.1 Protein Homology CDS 67666 67752 . - 0 ID=cds-WP_001575587.1;Parent=gene-CCO34_RS19360;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=CCO34_RS19360;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 68409 69353 . + . ID=gene-CCO34_RS19365;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=CCO34_RS19365;old_locus_tag=CCO34_19360 NZ_NPMD01000009.1 Protein Homology CDS 68409 69353 . + 0 ID=cds-WP_001115420.1;Parent=gene-CCO34_RS19365;Dbxref=GenBank:WP_001115420.1;Name=WP_001115420.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=CCO34_RS19365;product=transcriptional regulator LeuO;protein_id=WP_001115420.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 69675 71399 . + . ID=gene-CCO34_RS19370;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=CCO34_RS19370;old_locus_tag=CCO34_19365 NZ_NPMD01000009.1 Protein Homology CDS 69675 71399 . + 0 ID=cds-WP_170917832.1;Parent=gene-CCO34_RS19370;Dbxref=GenBank:WP_170917832.1;Name=WP_170917832.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=CCO34_RS19370;product=acetolactate synthase 3 large subunit;protein_id=WP_170917832.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 71402 71893 . + . ID=gene-CCO34_RS19375;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO34_RS19375;old_locus_tag=CCO34_19370 NZ_NPMD01000009.1 Protein Homology CDS 71402 71893 . + 0 ID=cds-WP_001563086.1;Parent=gene-CCO34_RS19375;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=CCO34_RS19375;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 72177 73181 . + . ID=gene-CCO34_RS19380;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=CCO34_RS19380;old_locus_tag=CCO34_19375 NZ_NPMD01000009.1 Protein Homology CDS 72177 73181 . + 0 ID=cds-WP_000762406.1;Parent=gene-CCO34_RS19380;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=CCO34_RS19380;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 73787 74245 . + . ID=gene-CCO34_RS19385;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CCO34_RS19385;old_locus_tag=CCO34_19380 NZ_NPMD01000009.1 Protein Homology CDS 73787 74245 . + 0 ID=cds-WP_000488294.1;Parent=gene-CCO34_RS19385;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=CCO34_RS19385;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 74247 75188 . + . ID=gene-CCO34_RS19390;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CCO34_RS19390;old_locus_tag=CCO34_19385 NZ_NPMD01000009.1 Protein Homology CDS 74247 75188 . + 0 ID=cds-WP_000970444.1;Parent=gene-CCO34_RS19390;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=CCO34_RS19390;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 75185 75550 . + . ID=gene-CCO34_RS19395;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CCO34_RS19395;old_locus_tag=CCO34_19390 NZ_NPMD01000009.1 Protein Homology CDS 75185 75550 . + 0 ID=cds-WP_000625651.1;Parent=gene-CCO34_RS19395;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=CCO34_RS19395;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 75566 77332 . + . ID=gene-CCO34_RS19400;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO34_RS19400;old_locus_tag=CCO34_19395 NZ_NPMD01000009.1 Protein Homology CDS 75566 77332 . + 0 ID=cds-WP_000642235.1;Parent=gene-CCO34_RS19400;Dbxref=GenBank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=CCO34_RS19400;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 77319 78806 . + . ID=gene-CCO34_RS19405;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=CCO34_RS19405;old_locus_tag=CCO34_19400 NZ_NPMD01000009.1 Protein Homology CDS 77319 78806 . + 0 ID=cds-WP_000775084.1;Parent=gene-CCO34_RS19405;Dbxref=GenBank:WP_000775084.1;Name=WP_000775084.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=CCO34_RS19405;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_000775084.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 78803 80161 . + . ID=gene-CCO34_RS19410;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=CCO34_RS19410;old_locus_tag=CCO34_19405 NZ_NPMD01000009.1 Protein Homology CDS 78803 80161 . + 0 ID=cds-WP_000626632.1;Parent=gene-CCO34_RS19410;Dbxref=GenBank:WP_000626632.1;Name=WP_000626632.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=CCO34_RS19410;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626632.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 80155 81237 . + . ID=gene-CCO34_RS19415;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CCO34_RS19415;old_locus_tag=CCO34_19410 NZ_NPMD01000009.1 Protein Homology CDS 80155 81237 . + 0 ID=cds-WP_000964138.1;Parent=gene-CCO34_RS19415;Dbxref=GenBank:WP_000964138.1;Name=WP_000964138.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=CCO34_RS19415;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 81240 82556 . + . ID=gene-CCO34_RS19420;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CCO34_RS19420;old_locus_tag=CCO34_19415 NZ_NPMD01000009.1 Protein Homology CDS 81240 82556 . + 0 ID=cds-WP_000796443.1;Parent=gene-CCO34_RS19420;Dbxref=GenBank:WP_000796443.1;Name=WP_000796443.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=CCO34_RS19420;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796443.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 82556 83800 . + . ID=gene-CCO34_RS19425;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CCO34_RS19425;old_locus_tag=CCO34_19420 NZ_NPMD01000009.1 Protein Homology CDS 82556 83800 . + 0 ID=cds-WP_001239803.1;Parent=gene-CCO34_RS19425;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=CCO34_RS19425;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 83797 84864 . + . ID=gene-CCO34_RS19430;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CCO34_RS19430;old_locus_tag=CCO34_19425 NZ_NPMD01000009.1 Protein Homology CDS 83797 84864 . + 0 ID=cds-WP_080068424.1;Parent=gene-CCO34_RS19430;Dbxref=GenBank:WP_080068424.1;Name=WP_080068424.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=CCO34_RS19430;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_080068424.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 84983 86458 . + . ID=gene-CCO34_RS19435;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CCO34_RS19435;old_locus_tag=CCO34_19430 NZ_NPMD01000009.1 Protein Homology CDS 84983 86458 . + 0 ID=cds-WP_001096058.1;Parent=gene-CCO34_RS19435;Dbxref=GenBank:WP_001096058.1;Name=WP_001096058.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=CCO34_RS19435;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096058.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 86451 87371 . + . ID=gene-CCO34_RS19440;Name=CCO34_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19440;old_locus_tag=CCO34_19435 NZ_NPMD01000009.1 Protein Homology CDS 86451 87371 . + 0 ID=cds-WP_000763895.1;Parent=gene-CCO34_RS19440;Dbxref=GenBank:WP_000763895.1;Name=WP_000763895.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=CCO34_RS19440;product=D-alanine--D-alanine ligase;protein_id=WP_000763895.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 87373 88203 . + . ID=gene-CCO34_RS19445;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=CCO34_RS19445;old_locus_tag=CCO34_19440 NZ_NPMD01000009.1 Protein Homology CDS 87373 88203 . + 0 ID=cds-WP_000075728.1;Parent=gene-CCO34_RS19445;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=CCO34_RS19445;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 88200 89462 . + . ID=gene-CCO34_RS19450;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CCO34_RS19450;old_locus_tag=CCO34_19445 NZ_NPMD01000009.1 Protein Homology CDS 88200 89462 . + 0 ID=cds-WP_000588463.1;Parent=gene-CCO34_RS19450;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=CCO34_RS19450;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 89523 90674 . + . ID=gene-CCO34_RS19455;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CCO34_RS19455;old_locus_tag=CCO34_19450 NZ_NPMD01000009.1 Protein Homology CDS 89523 90674 . + 0 ID=cds-WP_000462785.1;Parent=gene-CCO34_RS19455;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=CCO34_RS19455;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 90775 91692 . + . ID=gene-CCO34_RS19460;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=CCO34_RS19460;old_locus_tag=CCO34_19455 NZ_NPMD01000009.1 Protein Homology CDS 90775 91692 . + 0 ID=cds-WP_000595487.1;Parent=gene-CCO34_RS19460;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=CCO34_RS19460;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 91971 92468 . + . ID=gene-CCO34_RS19465;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=CCO34_RS19465;old_locus_tag=CCO34_19460 NZ_NPMD01000009.1 Protein Homology CDS 91971 92468 . + 0 ID=cds-WP_000014336.1;Parent=gene-CCO34_RS19465;Dbxref=GenBank:WP_000014336.1;Name=WP_000014336.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=CCO34_RS19465;product=secA translation cis-regulator SecM;protein_id=WP_000014336.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 92530 95235 . + . ID=gene-CCO34_RS19470;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CCO34_RS19470;old_locus_tag=CCO34_19465 NZ_NPMD01000009.1 Protein Homology CDS 92530 95235 . + 0 ID=cds-WP_000905756.1;Parent=gene-CCO34_RS19470;Dbxref=GenBank:WP_000905756.1;Name=WP_000905756.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=CCO34_RS19470;product=preprotein translocase subunit SecA;protein_id=WP_000905756.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 95391 95786 . + . ID=gene-CCO34_RS19475;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=CCO34_RS19475;old_locus_tag=CCO34_19470 NZ_NPMD01000009.1 Protein Homology CDS 95391 95786 . + 0 ID=cds-WP_000736057.1;Parent=gene-CCO34_RS19475;Dbxref=GenBank:WP_000736057.1;Name=WP_000736057.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459142.1;locus_tag=CCO34_RS19475;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736057.1;transl_table=11 NZ_NPMD01000009.1 RefSeq pseudogene 95820 95972 . - . ID=gene-CCO34_RS25885;Name=CCO34_RS25885;end_range=95972,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS25885;old_locus_tag=CCO34_19475;partial=true;pseudo=true NZ_NPMD01000009.1 Protein Homology CDS 95820 95972 . - 0 ID=cds-CCO34_RS25885;Parent=gene-CCO34_RS25885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=95972,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=CCO34_RS25885;partial=true;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_NPMD01000009.1 RefSeq pseudogene 95999 96112 . + . ID=gene-CCO34_RS19485;Name=CCO34_RS19485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO34_RS19485;old_locus_tag=CCO34_19480;partial=true;pseudo=true;start_range=.,95999 NZ_NPMD01000009.1 Protein Homology CDS 95999 96112 . + 0 ID=cds-CCO34_RS19485;Parent=gene-CCO34_RS19485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=CCO34_RS19485;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,95999;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 96109 96300 . - . ID=gene-CCO34_RS19490;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=CCO34_RS19490;old_locus_tag=CCO34_19485 NZ_NPMD01000009.1 Protein Homology CDS 96109 96300 . - 0 ID=cds-WP_001286420.1;Parent=gene-CCO34_RS19490;Dbxref=GenBank:WP_001286420.1;Name=WP_001286420.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=CCO34_RS19490;product=DNA gyrase inhibitor YacG;protein_id=WP_001286420.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 96310 97053 . - . ID=gene-CCO34_RS19495;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=CCO34_RS19495;old_locus_tag=CCO34_19490 NZ_NPMD01000009.1 Protein Homology CDS 96310 97053 . - 0 ID=cds-WP_000557441.1;Parent=gene-CCO34_RS19495;Dbxref=GenBank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=CCO34_RS19495;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 97053 97673 . - . ID=gene-CCO34_RS19500;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CCO34_RS19500;old_locus_tag=CCO34_19495 NZ_NPMD01000009.1 Protein Homology CDS 97053 97673 . - 0 ID=cds-WP_001270913.1;Parent=gene-CCO34_RS19500;Dbxref=GenBank:WP_001270913.1;Name=WP_001270913.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=CCO34_RS19500;product=dephospho-CoA kinase;protein_id=WP_001270913.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 97899 98942 . + . ID=gene-CCO34_RS19505;Name=CCO34_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19505;old_locus_tag=CCO34_19500 NZ_NPMD01000009.1 Protein Homology CDS 97899 98942 . + 0 ID=cds-WP_001217364.1;Parent=gene-CCO34_RS19505;Dbxref=GenBank:WP_001217364.1;Name=WP_001217364.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=CCO34_RS19505;product=GMP reductase;protein_id=WP_001217364.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 98973 100175 . - . ID=gene-CCO34_RS19510;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=CCO34_RS19510;old_locus_tag=CCO34_19505 NZ_NPMD01000009.1 Protein Homology CDS 98973 100175 . - 0 ID=cds-WP_000114084.1;Parent=gene-CCO34_RS19510;Dbxref=GenBank:WP_000114084.1;Name=WP_000114084.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=CCO34_RS19510;product=protein transport protein HofC;protein_id=WP_000114084.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 100165 101550 . - . ID=gene-CCO34_RS19515;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=CCO34_RS19515;old_locus_tag=CCO34_19510 NZ_NPMD01000009.1 Protein Homology CDS 100165 101550 . - 0 ID=cds-WP_000650615.1;Parent=gene-CCO34_RS19515;Dbxref=GenBank:WP_000650615.1;Name=WP_000650615.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=CCO34_RS19515;product=type II secretion system protein GspE;protein_id=WP_000650615.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 101560 101997 . - . ID=gene-CCO34_RS19520;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=CCO34_RS19520;old_locus_tag=CCO34_19515 NZ_NPMD01000009.1 Protein Homology CDS 101560 101997 . - 0 ID=cds-WP_000414989.1;Parent=gene-CCO34_RS19520;Dbxref=GenBank:WP_000414989.1;Name=WP_000414989.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=CCO34_RS19520;product=prepilin peptidase-dependent pilin;protein_id=WP_000414989.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 102219 103112 . - . ID=gene-CCO34_RS19530;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=CCO34_RS19530;old_locus_tag=CCO34_19525 NZ_NPMD01000009.1 Protein Homology CDS 102219 103112 . - 0 ID=cds-WP_001135135.1;Parent=gene-CCO34_RS19530;Dbxref=GenBank:WP_001135135.1;Name=WP_001135135.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=CCO34_RS19530;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135135.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 103200 103763 . + . ID=gene-CCO34_RS19535;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=CCO34_RS19535;old_locus_tag=CCO34_19530 NZ_NPMD01000009.1 Protein Homology CDS 103200 103763 . + 0 ID=cds-WP_000936329.1;Parent=gene-CCO34_RS19535;Dbxref=GenBank:WP_000936329.1;Name=WP_000936329.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=CCO34_RS19535;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936329.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 103760 104614 . + . ID=gene-CCO34_RS19540;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=CCO34_RS19540;old_locus_tag=CCO34_19535 NZ_NPMD01000009.1 Protein Homology CDS 103760 104614 . + 0 ID=cds-WP_000172039.1;Parent=gene-CCO34_RS19540;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=CCO34_RS19540;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 104706 105656 . - . ID=gene-CCO34_RS19545;Name=CCO34_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19545;old_locus_tag=CCO34_19540 NZ_NPMD01000009.1 Protein Homology CDS 104706 105656 . - 0 ID=cds-WP_000024769.1;Parent=gene-CCO34_RS19545;Dbxref=GenBank:WP_000024769.1;Name=WP_000024769.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=CCO34_RS19545;product=glycoside hydrolase family 43 protein;protein_id=WP_000024769.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 105656 107062 . - . ID=gene-CCO34_RS19550;Name=CCO34_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19550;old_locus_tag=CCO34_19545 NZ_NPMD01000009.1 Protein Homology CDS 105656 107062 . - 0 ID=cds-WP_000357537.1;Parent=gene-CCO34_RS19550;Dbxref=GenBank:WP_000357537.1;Name=WP_000357537.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=CCO34_RS19550;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_000357537.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 107226 108599 . - . ID=gene-CCO34_RS19555;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=CCO34_RS19555;old_locus_tag=CCO34_19550 NZ_NPMD01000009.1 Protein Homology CDS 107226 108599 . - 0 ID=cds-WP_000969487.1;Parent=gene-CCO34_RS19555;Dbxref=GenBank:WP_000969487.1;Name=WP_000969487.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=CCO34_RS19555;product=aromatic amino acid transporter AroP;protein_id=WP_000969487.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 109162 109926 . + . ID=gene-CCO34_RS19560;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=CCO34_RS19560;old_locus_tag=CCO34_19555 NZ_NPMD01000009.1 Protein Homology CDS 109162 109926 . + 0 ID=cds-WP_000331771.1;Parent=gene-CCO34_RS19560;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=CCO34_RS19560;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 110086 112749 . + . ID=gene-CCO34_RS19565;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=CCO34_RS19565;old_locus_tag=CCO34_19560 NZ_NPMD01000009.1 Protein Homology CDS 110086 112749 . + 0 ID=cds-WP_000003852.1;Parent=gene-CCO34_RS19565;Dbxref=GenBank:WP_000003852.1;Name=WP_000003852.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=CCO34_RS19565;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003852.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 112764 114647 . + . ID=gene-CCO34_RS19570;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=CCO34_RS19570;old_locus_tag=CCO34_19565 NZ_NPMD01000009.1 Protein Homology CDS 112764 114647 . + 0 ID=cds-WP_000963611.1;Parent=gene-CCO34_RS19570;Dbxref=GenBank:WP_000963611.1;Name=WP_000963611.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=CCO34_RS19570;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963611.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 114849 116273 . + . ID=gene-CCO34_RS19575;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CCO34_RS19575;old_locus_tag=CCO34_19570 NZ_NPMD01000009.1 Protein Homology CDS 114849 116273 . + 0 ID=cds-WP_001519338.1;Parent=gene-CCO34_RS19575;Dbxref=GenBank:WP_001519338.1;Name=WP_001519338.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=CCO34_RS19575;product=dihydrolipoyl dehydrogenase;protein_id=WP_001519338.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 116562 116846 . + . ID=gene-CCO34_RS19580;Name=CCO34_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19580;old_locus_tag=CCO34_19575 NZ_NPMD01000009.1 Protein Homology CDS 116562 116846 . + 0 ID=cds-WP_000765363.1;Parent=gene-CCO34_RS19580;Dbxref=GenBank:WP_000765363.1;Name=WP_000765363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=CCO34_RS19580;product=outer membrane protein;protein_id=WP_000765363.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 116884 117675 . - . ID=gene-CCO34_RS19585;Name=CCO34_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19585;old_locus_tag=CCO34_19580 NZ_NPMD01000009.1 Protein Homology CDS 116884 117675 . - 0 ID=cds-WP_000757452.1;Parent=gene-CCO34_RS19585;Dbxref=GenBank:WP_000757452.1;Name=WP_000757452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=CCO34_RS19585;product=DUF2950 family protein;protein_id=WP_000757452.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 117688 119313 . - . ID=gene-CCO34_RS19590;Name=CCO34_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19590;old_locus_tag=CCO34_19585 NZ_NPMD01000009.1 Protein Homology CDS 117688 119313 . - 0 ID=cds-WP_000174539.1;Parent=gene-CCO34_RS19590;Dbxref=GenBank:WP_000174539.1;Name=WP_000174539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=CCO34_RS19590;product=DUF3300 domain-containing protein;protein_id=WP_000174539.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 119702 122299 . + . ID=gene-CCO34_RS19595;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=CCO34_RS19595;old_locus_tag=CCO34_19590 NZ_NPMD01000009.1 Protein Homology CDS 119702 122299 . + 0 ID=cds-WP_000888964.1;Parent=gene-CCO34_RS19595;Dbxref=GenBank:WP_000888964.1;Name=WP_000888964.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459163.1;locus_tag=CCO34_RS19595;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_000888964.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 122339 122803 . - . ID=gene-CCO34_RS19600;Name=CCO34_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19600;old_locus_tag=CCO34_19595 NZ_NPMD01000009.1 Protein Homology CDS 122339 122803 . - 0 ID=cds-WP_000110441.1;Parent=gene-CCO34_RS19600;Dbxref=GenBank:WP_000110441.1;Name=WP_000110441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=CCO34_RS19600;product=membrane protein;protein_id=WP_000110441.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 123221 123544 . - . ID=gene-CCO34_RS19605;Name=CCO34_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19605;old_locus_tag=CCO34_19600 NZ_NPMD01000009.1 Protein Homology CDS 123221 123544 . - 0 ID=cds-WP_001101536.1;Parent=gene-CCO34_RS19605;Dbxref=GenBank:WP_001101536.1;Name=WP_001101536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=CCO34_RS19605;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_001101536.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 123815 124177 . + . ID=gene-CCO34_RS19610;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=CCO34_RS19610;old_locus_tag=CCO34_19605 NZ_NPMD01000009.1 Protein Homology CDS 123815 124177 . + 0 ID=cds-WP_000384308.1;Parent=gene-CCO34_RS19610;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=CCO34_RS19610;product=protein YacL;protein_id=WP_000384308.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 124412 125365 . + . ID=gene-CCO34_RS19615;Name=CCO34_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19615;old_locus_tag=CCO34_19610 NZ_NPMD01000009.1 Protein Homology CDS 124412 125365 . + 0 ID=cds-WP_001022089.1;Parent=gene-CCO34_RS19615;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=CCO34_RS19615;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 125362 126633 . + . ID=gene-CCO34_RS19620;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=CCO34_RS19620;old_locus_tag=CCO34_19615 NZ_NPMD01000009.1 Protein Homology CDS 125362 126633 . + 0 ID=cds-WP_000783302.1;Parent=gene-CCO34_RS19620;Dbxref=GenBank:WP_000783302.1;Name=WP_000783302.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=CCO34_RS19620;product=D-threonate kinase;protein_id=WP_000783302.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 126623 127606 . + . ID=gene-CCO34_RS19625;Name=CCO34_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19625;old_locus_tag=CCO34_19620 NZ_NPMD01000009.1 Protein Homology CDS 126623 127606 . + 0 ID=cds-WP_000448749.1;Parent=gene-CCO34_RS19625;Dbxref=GenBank:WP_000448749.1;Name=WP_000448749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=CCO34_RS19625;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448749.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 127616 128383 . + . ID=gene-CCO34_RS19630;Name=CCO34_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19630;old_locus_tag=CCO34_19625 NZ_NPMD01000009.1 Protein Homology CDS 127616 128383 . + 0 ID=cds-WP_000678254.1;Parent=gene-CCO34_RS19630;Dbxref=GenBank:WP_000678254.1;Name=WP_000678254.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=CCO34_RS19630;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678254.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 128413 129207 . - . ID=gene-CCO34_RS19635;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=CCO34_RS19635;old_locus_tag=CCO34_19630 NZ_NPMD01000009.1 Protein Homology CDS 128413 129207 . - 0 ID=cds-WP_000734276.1;Parent=gene-CCO34_RS19635;Dbxref=GenBank:WP_000734276.1;Name=WP_000734276.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=CCO34_RS19635;product=adenosylmethionine decarboxylase;protein_id=WP_000734276.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 129228 130088 . - . ID=gene-CCO34_RS19640;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=CCO34_RS19640;old_locus_tag=CCO34_19635 NZ_NPMD01000009.1 Protein Homology CDS 129228 130088 . - 0 ID=cds-WP_000829973.1;Parent=gene-CCO34_RS19640;Dbxref=GenBank:WP_000829973.1;Name=WP_000829973.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=CCO34_RS19640;product=polyamine aminopropyltransferase;protein_id=WP_000829973.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 130195 130542 . - . ID=gene-CCO34_RS19645;Name=CCO34_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19645;old_locus_tag=CCO34_19640 NZ_NPMD01000009.1 Protein Homology CDS 130195 130542 . - 0 ID=cds-WP_000846613.1;Parent=gene-CCO34_RS19645;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=CCO34_RS19645;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 130744 132354 . + . ID=gene-CCO34_RS19650;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=CCO34_RS19650;old_locus_tag=CCO34_19645 NZ_NPMD01000009.1 Protein Homology CDS 130744 132354 . + 0 ID=cds-WP_000946047.1;Parent=gene-CCO34_RS19650;Dbxref=GenBank:WP_000946047.1;Name=WP_000946047.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=CCO34_RS19650;product=multicopper oxidase CueO;protein_id=WP_000946047.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 132432 134822 . - . ID=gene-CCO34_RS19655;Name=CCO34_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19655;old_locus_tag=CCO34_19650 NZ_NPMD01000009.1 Protein Homology CDS 132432 134822 . - 0 ID=cds-WP_080180914.1;Parent=gene-CCO34_RS19655;Dbxref=GenBank:WP_080180914.1;Name=WP_080180914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=CCO34_RS19655;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_080180914.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 135028 135564 . + . ID=gene-CCO34_RS19660;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CCO34_RS19660;old_locus_tag=CCO34_19655 NZ_NPMD01000009.1 Protein Homology CDS 135028 135564 . + 0 ID=cds-WP_000683343.1;Parent=gene-CCO34_RS19660;Dbxref=GenBank:WP_000683343.1;Name=WP_000683343.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=CCO34_RS19660;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683343.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 135622 136284 . - . ID=gene-CCO34_RS19665;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=CCO34_RS19665;old_locus_tag=CCO34_19660 NZ_NPMD01000009.1 Protein Homology CDS 135622 136284 . - 0 ID=cds-WP_000651591.1;Parent=gene-CCO34_RS19665;Dbxref=GenBank:WP_000651591.1;Name=WP_000651591.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=CCO34_RS19665;product=carbonate dehydratase;protein_id=WP_000651591.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 136393 137319 . + . ID=gene-CCO34_RS19670;Name=CCO34_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19670;old_locus_tag=CCO34_19665 NZ_NPMD01000009.1 Protein Homology CDS 136393 137319 . + 0 ID=cds-WP_000150619.1;Parent=gene-CCO34_RS19670;Dbxref=GenBank:WP_000150619.1;Name=WP_000150619.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=CCO34_RS19670;product=ABC transporter ATP-binding protein;protein_id=WP_000150619.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 137316 138086 . + . ID=gene-CCO34_RS19675;Name=CCO34_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19675;old_locus_tag=CCO34_19670 NZ_NPMD01000009.1 Protein Homology CDS 137316 138086 . + 0 ID=cds-WP_000983418.1;Parent=gene-CCO34_RS19675;Dbxref=GenBank:WP_000983418.1;Name=WP_000983418.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=CCO34_RS19675;product=ABC transporter permease;protein_id=WP_000983418.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 138200 139276 . - . ID=gene-CCO34_RS19680;Name=CCO34_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19680;old_locus_tag=CCO34_19675 NZ_NPMD01000009.1 Protein Homology CDS 138200 139276 . - 0 ID=cds-WP_080180913.1;Parent=gene-CCO34_RS19680;Dbxref=GenBank:WP_080180913.1;Name=WP_080180913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=CCO34_RS19680;product=fimbrial protein;protein_id=WP_080180913.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 139285 141831 . - . ID=gene-CCO34_RS19685;Name=CCO34_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19685;old_locus_tag=CCO34_19680 NZ_NPMD01000009.1 Protein Homology CDS 139285 141831 . - 0 ID=cds-WP_023238182.1;Parent=gene-CCO34_RS19685;Dbxref=GenBank:WP_023238182.1;Name=WP_023238182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=CCO34_RS19685;product=fimbrial outer membrane usher protein;protein_id=WP_023238182.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 141858 142541 . - . ID=gene-CCO34_RS19690;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=CCO34_RS19690;old_locus_tag=CCO34_19685 NZ_NPMD01000009.1 Protein Homology CDS 141858 142541 . - 0 ID=cds-WP_001086408.1;Parent=gene-CCO34_RS19690;Dbxref=GenBank:WP_001086408.1;Name=WP_001086408.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=CCO34_RS19690;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086408.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 142589 143128 . - . ID=gene-CCO34_RS19695;Name=stiA;gbkey=Gene;gene=stiA;gene_biotype=protein_coding;locus_tag=CCO34_RS19695;old_locus_tag=CCO34_19690 NZ_NPMD01000009.1 Protein Homology CDS 142589 143128 . - 0 ID=cds-WP_001821456.1;Parent=gene-CCO34_RS19695;Dbxref=GenBank:WP_001821456.1;Name=WP_001821456.1;gbkey=CDS;gene=stiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=CCO34_RS19695;product=Sti fimbria major subunit StiA;protein_id=WP_001821456.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 143498 143938 . + . ID=gene-CCO34_RS19700;Name=CCO34_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19700;old_locus_tag=CCO34_19695 NZ_NPMD01000009.1 Protein Homology CDS 143498 143938 . + 0 ID=cds-WP_080180912.1;Parent=gene-CCO34_RS19700;Dbxref=GenBank:WP_080180912.1;Name=WP_080180912.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=CCO34_RS19700;product=PTS sugar transporter subunit IIA;protein_id=WP_080180912.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 144000 145229 . + . ID=gene-CCO34_RS19705;Name=CCO34_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19705;old_locus_tag=CCO34_19700 NZ_NPMD01000009.1 Protein Homology CDS 144000 145229 . + 0 ID=cds-WP_080180911.1;Parent=gene-CCO34_RS19705;Dbxref=GenBank:WP_080180911.1;Name=WP_080180911.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=CCO34_RS19705;product=polysaccharide deacetylase family protein;protein_id=WP_080180911.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 145231 146292 . - . ID=gene-CCO34_RS19710;Name=CCO34_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19710;old_locus_tag=CCO34_19705 NZ_NPMD01000009.1 Protein Homology CDS 145231 146292 . - 0 ID=cds-WP_080180910.1;Parent=gene-CCO34_RS19710;Dbxref=GenBank:WP_080180910.1;Name=WP_080180910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506595.1;locus_tag=CCO34_RS19710;product=fimbrial protein StkG;protein_id=WP_080180910.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 146304 146903 . - . ID=gene-CCO34_RS19715;Name=CCO34_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19715;old_locus_tag=CCO34_19710 NZ_NPMD01000009.1 Protein Homology CDS 146304 146903 . - 0 ID=cds-WP_001186620.1;Parent=gene-CCO34_RS19715;Dbxref=GenBank:WP_001186620.1;Name=WP_001186620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186618.1;locus_tag=CCO34_RS19715;product=fimbrial-like protein;protein_id=WP_001186620.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 146922 147479 . - . ID=gene-CCO34_RS19720;Name=CCO34_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19720;old_locus_tag=CCO34_19715 NZ_NPMD01000009.1 Protein Homology CDS 146922 147479 . - 0 ID=cds-WP_000673422.1;Parent=gene-CCO34_RS19720;Dbxref=GenBank:WP_000673422.1;Name=WP_000673422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504756.1;locus_tag=CCO34_RS19720;product=fimbrial protein;protein_id=WP_000673422.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 147506 148090 . - . ID=gene-CCO34_RS19725;Name=CCO34_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19725;old_locus_tag=CCO34_19720 NZ_NPMD01000009.1 Protein Homology CDS 147506 148090 . - 0 ID=cds-WP_001267116.1;Parent=gene-CCO34_RS19725;Dbxref=GenBank:WP_001267116.1;Name=WP_001267116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001267117.1;locus_tag=CCO34_RS19725;product=fimbrial protein;protein_id=WP_001267116.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 148113 150710 . - . ID=gene-CCO34_RS19730;Name=CCO34_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19730;old_locus_tag=CCO34_19725 NZ_NPMD01000009.1 Protein Homology CDS 148113 150710 . - 0 ID=cds-WP_080180909.1;Parent=gene-CCO34_RS19730;Dbxref=GenBank:WP_080180909.1;Name=WP_080180909.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441536.1;locus_tag=CCO34_RS19730;product=outer membrane usher protein;protein_id=WP_080180909.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 150778 151530 . - . ID=gene-CCO34_RS19735;Name=CCO34_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19735;old_locus_tag=CCO34_19730 NZ_NPMD01000009.1 Protein Homology CDS 150778 151530 . - 0 ID=cds-WP_017441535.1;Parent=gene-CCO34_RS19735;Dbxref=GenBank:WP_017441535.1;Name=WP_017441535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248438.1;locus_tag=CCO34_RS19735;product=fimbrial chaperone;protein_id=WP_017441535.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 151617 152222 . - . ID=gene-CCO34_RS19740;Name=stkA;gbkey=Gene;gene=stkA;gene_biotype=protein_coding;locus_tag=CCO34_RS19740;old_locus_tag=CCO34_19735 NZ_NPMD01000009.1 Protein Homology CDS 151617 152222 . - 0 ID=cds-WP_020898401.1;Parent=gene-CCO34_RS19740;Dbxref=GenBank:WP_020898401.1;Name=WP_020898401.1;gbkey=CDS;gene=stkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466117.1;locus_tag=CCO34_RS19740;product=Stk fimbria major subunit StkA;protein_id=WP_020898401.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 152502 152882 . - . ID=gene-CCO34_RS19745;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CCO34_RS19745;old_locus_tag=CCO34_19740 NZ_NPMD01000009.1 Protein Homology CDS 152502 152882 . - 0 ID=cds-WP_000621526.1;Parent=gene-CCO34_RS19745;Dbxref=GenBank:WP_000621526.1;Name=WP_000621526.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=CCO34_RS19745;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 152977 153831 . - . ID=gene-CCO34_RS19755;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CCO34_RS19755;old_locus_tag=CCO34_19750 NZ_NPMD01000009.1 Protein Homology CDS 152977 153831 . - 0 ID=cds-WP_000905348.1;Parent=gene-CCO34_RS19755;Dbxref=GenBank:WP_000905348.1;Name=WP_000905348.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=CCO34_RS19755;product=pantoate--beta-alanine ligase;protein_id=WP_000905348.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 153957 154748 . - . ID=gene-CCO34_RS19760;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CCO34_RS19760;old_locus_tag=CCO34_19755 NZ_NPMD01000009.1 Protein Homology CDS 153957 154748 . - 0 ID=cds-WP_000805487.1;Parent=gene-CCO34_RS19760;Dbxref=GenBank:WP_000805487.1;Name=WP_000805487.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=CCO34_RS19760;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805487.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 154869 155348 . - . ID=gene-CCO34_RS19765;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CCO34_RS19765;old_locus_tag=CCO34_19760 NZ_NPMD01000009.1 Protein Homology CDS 154869 155348 . - 0 ID=cds-WP_080180908.1;Parent=gene-CCO34_RS19765;Dbxref=GenBank:WP_080180908.1;Name=WP_080180908.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=CCO34_RS19765;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_080180908.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 155345 156742 . - . ID=gene-CCO34_RS19770;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=CCO34_RS19770;old_locus_tag=CCO34_19765 NZ_NPMD01000009.1 Protein Homology CDS 155345 156742 . - 0 ID=cds-WP_125540466.1;Parent=gene-CCO34_RS19770;Dbxref=GenBank:WP_125540466.1;Name=WP_125540466.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=CCO34_RS19770;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_125540466.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 156904 157800 . - . ID=gene-CCO34_RS19775;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=CCO34_RS19775;old_locus_tag=CCO34_19770 NZ_NPMD01000009.1 Protein Homology CDS 156904 157800 . - 0 ID=cds-WP_000132295.1;Parent=gene-CCO34_RS19775;Dbxref=GenBank:WP_000132295.1;Name=WP_000132295.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=CCO34_RS19775;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_000132295.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 157869 158324 . - . ID=gene-CCO34_RS19780;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=CCO34_RS19780;old_locus_tag=CCO34_19775 NZ_NPMD01000009.1 Protein Homology CDS 157869 158324 . - 0 ID=cds-WP_001155232.1;Parent=gene-CCO34_RS19780;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=CCO34_RS19780;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 158501 159205 . - . ID=gene-CCO34_RS19785;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=CCO34_RS19785;old_locus_tag=CCO34_19780 NZ_NPMD01000009.1 Protein Homology CDS 158501 159205 . - 0 ID=cds-WP_000899412.1;Parent=gene-CCO34_RS19785;Dbxref=GenBank:WP_000899412.1;Name=WP_000899412.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=CCO34_RS19785;product=DNA/RNA nuclease SfsA;protein_id=WP_000899412.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 159222 159752 . - . ID=gene-CCO34_RS19790;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=CCO34_RS19790;old_locus_tag=CCO34_19785 NZ_NPMD01000009.1 Protein Homology CDS 159222 159752 . - 0 ID=cds-WP_001748937.1;Parent=gene-CCO34_RS19790;Dbxref=GenBank:WP_001748937.1;Name=WP_001748937.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=CCO34_RS19790;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001748937.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 159825 162254 . + . ID=gene-CCO34_RS19795;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=CCO34_RS19795;old_locus_tag=CCO34_19790 NZ_NPMD01000009.1 Protein Homology CDS 159825 162254 . + 0 ID=cds-WP_176452910.1;Parent=gene-CCO34_RS19795;Dbxref=GenBank:WP_176452910.1;Name=WP_176452910.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308179.2;locus_tag=CCO34_RS19795;product=ATP-dependent helicase HrpB;protein_id=WP_176452910.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 162395 164917 . + . ID=gene-CCO34_RS19800;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=CCO34_RS19800;old_locus_tag=CCO34_19795 NZ_NPMD01000009.1 Protein Homology CDS 162395 164917 . + 0 ID=cds-WP_000918119.1;Parent=gene-CCO34_RS19800;Dbxref=GenBank:WP_000918119.1;Name=WP_000918119.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=CCO34_RS19800;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918119.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 165210 167453 . + . ID=gene-CCO34_RS19805;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=CCO34_RS19805;old_locus_tag=CCO34_19800 NZ_NPMD01000009.1 Protein Homology CDS 165210 167453 . + 0 ID=cds-WP_000113212.1;Parent=gene-CCO34_RS19805;Dbxref=GenBank:WP_000113212.1;Name=WP_000113212.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308181.1;locus_tag=CCO34_RS19805;product=ferrichrome porin FhuA;protein_id=WP_000113212.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 167502 168299 . + . ID=gene-CCO34_RS19810;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=CCO34_RS19810;old_locus_tag=CCO34_19805 NZ_NPMD01000009.1 Protein Homology CDS 167502 168299 . + 0 ID=cds-WP_001157197.1;Parent=gene-CCO34_RS19810;Dbxref=GenBank:WP_001157197.1;Name=WP_001157197.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=CCO34_RS19810;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157197.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 168299 169189 . + . ID=gene-CCO34_RS19815;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=CCO34_RS19815;old_locus_tag=CCO34_19810 NZ_NPMD01000009.1 Protein Homology CDS 168299 169189 . + 0 ID=cds-WP_023210543.1;Parent=gene-CCO34_RS19815;Dbxref=GenBank:WP_023210543.1;Name=WP_023210543.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=CCO34_RS19815;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_023210543.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 169204 171243 . + . ID=gene-CCO34_RS19820;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=CCO34_RS19820;old_locus_tag=CCO34_19815 NZ_NPMD01000009.1 Protein Homology CDS 169204 171243 . + 0 ID=cds-WP_094965513.1;Parent=gene-CCO34_RS19820;Dbxref=GenBank:WP_094965513.1;Name=WP_094965513.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=CCO34_RS19820;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_094965513.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 171310 171543 . - . ID=gene-CCO34_RS25380;Name=CCO34_RS25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS25380 NZ_NPMD01000009.1 GeneMarkS-2+ CDS 171310 171543 . - 0 ID=cds-WP_139782500.1;Parent=gene-CCO34_RS25380;Dbxref=GenBank:WP_139782500.1;Name=WP_139782500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO34_RS25380;product=hypothetical protein;protein_id=WP_139782500.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 172182 172742 . + . ID=gene-CCO34_RS19830;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=CCO34_RS19830;old_locus_tag=CCO34_19825 NZ_NPMD01000009.1 Protein Homology CDS 172182 172742 . + 0 ID=cds-WP_080180906.1;Parent=gene-CCO34_RS19830;Dbxref=GenBank:WP_080180906.1;Name=WP_080180906.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=CCO34_RS19830;product=fimbrial major subunit StfA;protein_id=WP_080180906.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 172828 175485 . + . ID=gene-CCO34_RS19835;Name=CCO34_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19835;old_locus_tag=CCO34_19830 NZ_NPMD01000009.1 Protein Homology CDS 172828 175485 . + 0 ID=cds-WP_000951673.1;Parent=gene-CCO34_RS19835;Dbxref=GenBank:WP_000951673.1;Name=WP_000951673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=CCO34_RS19835;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000951673.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 175503 176255 . + . ID=gene-CCO34_RS19840;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=CCO34_RS19840;old_locus_tag=CCO34_19835 NZ_NPMD01000009.1 Protein Homology CDS 175503 176255 . + 0 ID=cds-WP_000982726.1;Parent=gene-CCO34_RS19840;Dbxref=GenBank:WP_000982726.1;Name=WP_000982726.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=CCO34_RS19840;product=fimbrial chaperone StfD;protein_id=WP_000982726.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 176274 176786 . + . ID=gene-CCO34_RS19845;Name=CCO34_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19845;old_locus_tag=CCO34_19840 NZ_NPMD01000009.1 Protein Homology CDS 176274 176786 . + 0 ID=cds-WP_001250313.1;Parent=gene-CCO34_RS19845;Dbxref=GenBank:WP_001250313.1;Name=WP_001250313.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=CCO34_RS19845;product=fimbrial protein;protein_id=WP_001250313.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 176783 177259 . + . ID=gene-CCO34_RS19850;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=CCO34_RS19850;old_locus_tag=CCO34_19845 NZ_NPMD01000009.1 Protein Homology CDS 176783 177259 . + 0 ID=cds-WP_000725074.1;Parent=gene-CCO34_RS19850;Dbxref=GenBank:WP_000725074.1;Name=WP_000725074.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=CCO34_RS19850;product=fimbrial minor subunit StfF;protein_id=WP_000725074.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 177259 177789 . + . ID=gene-CCO34_RS19855;Name=CCO34_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19855;old_locus_tag=CCO34_19850 NZ_NPMD01000009.1 Protein Homology CDS 177259 177789 . + 0 ID=cds-WP_001129314.1;Parent=gene-CCO34_RS19855;Dbxref=GenBank:WP_001129314.1;Name=WP_001129314.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=CCO34_RS19855;product=fimbrial protein;protein_id=WP_001129314.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 177789 178628 . + . ID=gene-CCO34_RS19860;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=CCO34_RS19860;old_locus_tag=CCO34_19855 NZ_NPMD01000009.1 Protein Homology CDS 177789 178628 . + 0 ID=cds-WP_023228929.1;Parent=gene-CCO34_RS19860;Dbxref=GenBank:WP_023228929.1;Name=WP_023228929.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=CCO34_RS19860;product=fimbrial adhesin StfH;protein_id=WP_023228929.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 178727 180007 . - . ID=gene-CCO34_RS19865;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CCO34_RS19865;old_locus_tag=CCO34_19860 NZ_NPMD01000009.1 Protein Homology CDS 178727 180007 . - 0 ID=cds-WP_000045257.1;Parent=gene-CCO34_RS19865;Dbxref=GenBank:WP_000045257.1;Name=WP_000045257.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=CCO34_RS19865;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045257.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 180177 181598 . + . ID=gene-CCO34_RS19870;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=CCO34_RS19870;old_locus_tag=CCO34_19865 NZ_NPMD01000009.1 Protein Homology CDS 180177 181598 . + 0 ID=cds-WP_000845428.1;Parent=gene-CCO34_RS19870;Dbxref=GenBank:WP_000845428.1;Name=WP_000845428.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=CCO34_RS19870;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845428.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 181680 182024 . + . ID=gene-CCO34_RS19875;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=CCO34_RS19875;old_locus_tag=CCO34_19870 NZ_NPMD01000009.1 Protein Homology CDS 181680 182024 . + 0 ID=cds-WP_001278668.1;Parent=gene-CCO34_RS19875;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=CCO34_RS19875;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 182125 182748 . - . ID=gene-CCO34_RS19880;Name=CCO34_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19880;old_locus_tag=CCO34_19875 NZ_NPMD01000009.1 Protein Homology CDS 182125 182748 . - 0 ID=cds-WP_000964234.1;Parent=gene-CCO34_RS19880;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=CCO34_RS19880;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 182785 183585 . - . ID=gene-CCO34_RS19885;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=CCO34_RS19885;old_locus_tag=CCO34_19880 NZ_NPMD01000009.1 Protein Homology CDS 182785 183585 . - 0 ID=cds-WP_000240675.1;Parent=gene-CCO34_RS19885;Dbxref=GenBank:WP_000240675.1;Name=WP_000240675.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=CCO34_RS19885;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_000240675.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 183578 184276 . - . ID=gene-CCO34_RS19890;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=CCO34_RS19890;old_locus_tag=CCO34_19885 NZ_NPMD01000009.1 Protein Homology CDS 183578 184276 . - 0 ID=cds-WP_000689822.1;Parent=gene-CCO34_RS19890;Dbxref=GenBank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=CCO34_RS19890;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 184361 185878 . + . ID=gene-CCO34_RS19895;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=CCO34_RS19895;old_locus_tag=CCO34_19890 NZ_NPMD01000009.1 Protein Homology CDS 184361 185878 . + 0 ID=cds-WP_000146450.1;Parent=gene-CCO34_RS19895;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=CCO34_RS19895;product=dGTPase;protein_id=WP_000146450.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 186008 187435 . + . ID=gene-CCO34_RS19900;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=CCO34_RS19900;old_locus_tag=CCO34_19895 NZ_NPMD01000009.1 Protein Homology CDS 186008 187435 . + 0 ID=cds-WP_000753958.1;Parent=gene-CCO34_RS19900;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=CCO34_RS19900;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 187588 188745 . + . ID=gene-CCO34_RS19905;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=CCO34_RS19905;old_locus_tag=CCO34_19900 NZ_NPMD01000009.1 Protein Homology CDS 187588 188745 . + 0 ID=cds-WP_000929420.1;Parent=gene-CCO34_RS19905;Dbxref=GenBank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=CCO34_RS19905;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 188834 189220 . - . ID=gene-CCO34_RS19910;Name=CCO34_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19910;old_locus_tag=CCO34_19905 NZ_NPMD01000009.1 Protein Homology CDS 188834 189220 . - 0 ID=cds-WP_000272193.1;Parent=gene-CCO34_RS19910;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=CCO34_RS19910;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 189467 190768 . + . ID=gene-CCO34_RS19915;Name=CCO34_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS19915;old_locus_tag=CCO34_19910 NZ_NPMD01000009.1 Protein Homology CDS 189467 190768 . + 0 ID=cds-WP_000017191.1;Parent=gene-CCO34_RS19915;Dbxref=GenBank:WP_000017191.1;Name=WP_000017191.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=CCO34_RS19915;product=MFS transporter;protein_id=WP_000017191.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 190805 191629 . - . ID=gene-CCO34_RS19920;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CCO34_RS19920;old_locus_tag=CCO34_19915 NZ_NPMD01000009.1 Protein Homology CDS 190805 191629 . - 0 ID=cds-WP_001186673.1;Parent=gene-CCO34_RS19920;Dbxref=GenBank:WP_001186673.1;Name=WP_001186673.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=CCO34_RS19920;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186673.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 191659 194331 . - . ID=gene-CCO34_RS19925;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=CCO34_RS19925;old_locus_tag=CCO34_19920 NZ_NPMD01000009.1 Protein Homology CDS 191659 194331 . - 0 ID=cds-WP_001094519.1;Parent=gene-CCO34_RS19925;Dbxref=GenBank:WP_001094519.1;Name=WP_001094519.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=CCO34_RS19925;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094519.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 194569 195363 . - . ID=gene-CCO34_RS19935;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CCO34_RS19935;old_locus_tag=CCO34_19930 NZ_NPMD01000009.1 Protein Homology CDS 194569 195363 . - 0 ID=cds-WP_001018214.1;Parent=gene-CCO34_RS19935;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=CCO34_RS19935;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 195814 196539 . + . ID=gene-CCO34_RS19945;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CCO34_RS19945;old_locus_tag=CCO34_19940 NZ_NPMD01000009.1 Protein Homology CDS 195814 196539 . + 0 ID=cds-WP_000246886.1;Parent=gene-CCO34_RS19945;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=CCO34_RS19945;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 196797 197648 . + . ID=gene-CCO34_RS19955;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CCO34_RS19955;old_locus_tag=CCO34_19950 NZ_NPMD01000009.1 Protein Homology CDS 196797 197648 . + 0 ID=cds-WP_000808106.1;Parent=gene-CCO34_RS19955;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=CCO34_RS19955;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 197793 198518 . + . ID=gene-CCO34_RS19960;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CCO34_RS19960;old_locus_tag=CCO34_19955 NZ_NPMD01000009.1 Protein Homology CDS 197793 198518 . + 0 ID=cds-WP_000224567.1;Parent=gene-CCO34_RS19960;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=CCO34_RS19960;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 198665 199222 . + . ID=gene-CCO34_RS19965;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CCO34_RS19965;old_locus_tag=CCO34_19960 NZ_NPMD01000009.1 Protein Homology CDS 198665 199222 . + 0 ID=cds-WP_000622423.1;Parent=gene-CCO34_RS19965;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=CCO34_RS19965;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 199363 200559 . + . ID=gene-CCO34_RS19970;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=CCO34_RS19970;old_locus_tag=CCO34_19965 NZ_NPMD01000009.1 Protein Homology CDS 199363 200559 . + 0 ID=cds-WP_000811905.1;Parent=gene-CCO34_RS19970;Dbxref=GenBank:WP_000811905.1;Name=WP_000811905.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=CCO34_RS19970;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811905.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 200872 201630 . + . ID=gene-CCO34_RS19980;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=CCO34_RS19980;old_locus_tag=CCO34_19975 NZ_NPMD01000009.1 Protein Homology CDS 200872 201630 . + 0 ID=cds-WP_000947413.1;Parent=gene-CCO34_RS19980;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=CCO34_RS19980;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 201643 202500 . + . ID=gene-CCO34_RS19985;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=CCO34_RS19985;old_locus_tag=CCO34_19980 NZ_NPMD01000009.1 Protein Homology CDS 201643 202500 . + 0 ID=cds-WP_000922422.1;Parent=gene-CCO34_RS19985;Dbxref=GenBank:WP_000922422.1;Name=WP_000922422.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=CCO34_RS19985;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 202512 203864 . + . ID=gene-CCO34_RS19990;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CCO34_RS19990;old_locus_tag=CCO34_19985 NZ_NPMD01000009.1 Protein Homology CDS 202512 203864 . + 0 ID=cds-WP_000949017.1;Parent=gene-CCO34_RS19990;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=CCO34_RS19990;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 203896 206310 . + . ID=gene-CCO34_RS19995;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=CCO34_RS19995;old_locus_tag=CCO34_19990 NZ_NPMD01000009.1 Protein Homology CDS 203896 206310 . + 0 ID=cds-WP_001240935.1;Parent=gene-CCO34_RS19995;Dbxref=GenBank:WP_001240935.1;Name=WP_001240935.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=CCO34_RS19995;product=outer membrane protein assembly factor BamA;protein_id=WP_001240935.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 206433 206918 . + . ID=gene-CCO34_RS20000;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=CCO34_RS20000;old_locus_tag=CCO34_19995 NZ_NPMD01000009.1 Protein Homology CDS 206433 206918 . + 0 ID=cds-WP_000758966.1;Parent=gene-CCO34_RS20000;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=CCO34_RS20000;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 206922 207947 . + . ID=gene-CCO34_RS20005;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=CCO34_RS20005;old_locus_tag=CCO34_20000 NZ_NPMD01000009.1 Protein Homology CDS 206922 207947 . + 0 ID=cds-WP_001139265.1;Parent=gene-CCO34_RS20005;Dbxref=GenBank:WP_001139265.1;Name=WP_001139265.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=CCO34_RS20005;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 208053 208508 . + . ID=gene-CCO34_RS20010;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CCO34_RS20010;old_locus_tag=CCO34_20005 NZ_NPMD01000009.1 Protein Homology CDS 208053 208508 . + 0 ID=cds-WP_000210741.1;Parent=gene-CCO34_RS20010;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=CCO34_RS20010;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 208512 209300 . + . ID=gene-CCO34_RS20015;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=CCO34_RS20015;old_locus_tag=CCO34_20010 NZ_NPMD01000009.1 Protein Homology CDS 208512 209300 . + 0 ID=cds-WP_000565950.1;Parent=gene-CCO34_RS20015;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=CCO34_RS20015;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 209300 210448 . + . ID=gene-CCO34_RS20020;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=CCO34_RS20020;old_locus_tag=CCO34_20015 NZ_NPMD01000009.1 Protein Homology CDS 209300 210448 . + 0 ID=cds-WP_000741217.1;Parent=gene-CCO34_RS20020;Dbxref=GenBank:WP_000741217.1;Name=WP_000741217.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=CCO34_RS20020;product=lipid-A-disaccharide synthase;protein_id=WP_000741217.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 210445 211041 . + . ID=gene-CCO34_RS20025;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=CCO34_RS20025;old_locus_tag=CCO34_20020 NZ_NPMD01000009.1 Protein Homology CDS 210445 211041 . + 0 ID=cds-WP_000569411.1;Parent=gene-CCO34_RS20025;Dbxref=GenBank:WP_000569411.1;Name=WP_000569411.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=CCO34_RS20025;product=ribonuclease HII;protein_id=WP_000569411.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 211065 214547 . + . ID=gene-CCO34_RS20030;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=CCO34_RS20030;old_locus_tag=CCO34_20025 NZ_NPMD01000009.1 Protein Homology CDS 211065 214547 . + 0 ID=cds-WP_001294821.1;Parent=gene-CCO34_RS20030;Dbxref=GenBank:WP_001294821.1;Name=WP_001294821.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=CCO34_RS20030;product=DNA polymerase III subunit alpha;protein_id=WP_001294821.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 214560 215519 . + . ID=gene-CCO34_RS20035;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=CCO34_RS20035;old_locus_tag=CCO34_20030 NZ_NPMD01000009.1 Protein Homology CDS 214560 215519 . + 0 ID=cds-WP_000055753.1;Parent=gene-CCO34_RS20035;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=CCO34_RS20035;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 215700 217463 . + . ID=gene-CCO34_RS20040;Name=CCO34_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20040;old_locus_tag=CCO34_20035 NZ_NPMD01000009.1 Protein Homology CDS 215700 217463 . + 0 ID=cds-WP_000524169.1;Parent=gene-CCO34_RS20040;Dbxref=GenBank:WP_000524169.1;Name=WP_000524169.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=CCO34_RS20040;product=chitinase;protein_id=WP_000524169.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 217539 219680 . + . ID=gene-CCO34_RS20045;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=CCO34_RS20045;old_locus_tag=CCO34_20040 NZ_NPMD01000009.1 Protein Homology CDS 217539 219680 . + 0 ID=cds-WP_001021042.1;Parent=gene-CCO34_RS20045;Dbxref=GenBank:WP_001021042.1;Name=WP_001021042.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=CCO34_RS20045;product=lysine decarboxylase LdcC;protein_id=WP_001021042.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 219736 220125 . + . ID=gene-CCO34_RS20050;Name=CCO34_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20050;old_locus_tag=CCO34_20045 NZ_NPMD01000009.1 Protein Homology CDS 219736 220125 . + 0 ID=cds-WP_000901088.1;Parent=gene-CCO34_RS20050;Dbxref=GenBank:WP_000901088.1;Name=WP_000901088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=CCO34_RS20050;product=VOC family protein;protein_id=WP_000901088.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 220188 221480 . + . ID=gene-CCO34_RS20055;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CCO34_RS20055;old_locus_tag=CCO34_20050 NZ_NPMD01000009.1 Protein Homology CDS 220188 221480 . + 0 ID=cds-WP_000210056.1;Parent=gene-CCO34_RS20055;Dbxref=GenBank:WP_000210056.1;Name=WP_000210056.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=CCO34_RS20055;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000210056.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 221564 221824 . - . ID=gene-CCO34_RS20060;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=CCO34_RS20060;old_locus_tag=CCO34_20055 NZ_NPMD01000009.1 Protein Homology CDS 221564 221824 . - 0 ID=cds-WP_000062330.1;Parent=gene-CCO34_RS20060;Dbxref=GenBank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=CCO34_RS20060;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 221811 222011 . - . ID=gene-CCO34_RS20065;Name=CCO34_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20065;old_locus_tag=CCO34_20060 NZ_NPMD01000009.1 Protein Homology CDS 221811 222011 . - 0 ID=cds-WP_001518678.1;Parent=gene-CCO34_RS20065;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=CCO34_RS20065;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 222209 222754 . + . ID=gene-CCO34_RS20070;Name=CCO34_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO34_RS20070;old_locus_tag=CCO34_20065 NZ_NPMD01000009.1 Protein Homology CDS 222209 222754 . + 0 ID=cds-WP_001185319.1;Parent=gene-CCO34_RS20070;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=CCO34_RS20070;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 222751 223173 . + . ID=gene-CCO34_RS20075;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=CCO34_RS20075;old_locus_tag=CCO34_20070 NZ_NPMD01000009.1 Protein Homology CDS 222751 223173 . + 0 ID=cds-WP_000560527.1;Parent=gene-CCO34_RS20075;Dbxref=GenBank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=CCO34_RS20075;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11 NZ_NPMD01000009.1 RefSeq gene 223205 223924 . + . ID=gene-CCO34_RS20080;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=CCO34_RS20080;old_locus_tag=CCO34_20075 NZ_NPMD01000009.1 Protein Homology CDS 223205 223924 . + 0 ID=cds-WP_000252577.1;Parent=gene-CCO34_RS20080;Dbxref=GenBank:WP_000252577.1;Name=WP_000252577.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000252577.1;locus_tag=CCO34_RS20080;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252577.1;transl_table=11 ###