##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM250744v1 #!genome-build-accession NCBI_Assembly:GCF_002507445.1 #!annotation-date 04/15/2025 22:35:04 #!annotation-source NCBI RefSeq GCF_002507445.1-RS_2025_04_15 ##sequence-region NZ_NPOH01000001.1 1 531403 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000001.1 RefSeq region 1 531403 . + . ID=NZ_NPOH01000001.1:1..531403;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000001.1 RefSeq pseudogene 1 907 . + . ID=gene-CCO46_RS00005;Name=CCO46_RS00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS00005;old_locus_tag=CCO46_00005;partial=true;pseudo=true;start_range=.,1 NZ_NPOH01000001.1 Protein Homology CDS 1 907 . + 2 ID=cds-CCO46_RS00005;Parent=gene-CCO46_RS00005;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=CCO46_RS00005;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 1148 2305 . + . ID=gene-CCO46_RS00010;Name=CCO46_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00010;old_locus_tag=CCO46_00010 NZ_NPOH01000001.1 Protein Homology CDS 1148 2305 . + 0 ID=cds-WP_235514171.1;Parent=gene-CCO46_RS00010;Dbxref=GenBank:WP_235514171.1;Name=WP_235514171.1;Ontology_term=GO:0008755,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=O antigen polymerase activity|0008755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530319.1;locus_tag=CCO46_RS00010;product=O-antigen polymerase;protein_id=WP_235514171.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 2302 3363 . + . ID=gene-CCO46_RS00015;Name=CCO46_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00015;old_locus_tag=CCO46_00015 NZ_NPOH01000001.1 Protein Homology CDS 2302 3363 . + 0 ID=cds-WP_023202510.1;Parent=gene-CCO46_RS00015;Dbxref=GenBank:WP_023202510.1;Name=WP_023202510.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=CCO46_RS00015;product=glycosyltransferase family 4 protein;protein_id=WP_023202510.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 3364 4308 . + . ID=gene-CCO46_RS00020;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=CCO46_RS00020;old_locus_tag=CCO46_00020 NZ_NPOH01000001.1 Protein Homology CDS 3364 4308 . + 0 ID=cds-WP_061372095.1;Parent=gene-CCO46_RS00020;Dbxref=GenBank:WP_061372095.1;Name=WP_061372095.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=CCO46_RS00020;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WP_061372095.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 4309 5748 . + . ID=gene-CCO46_RS00025;Name=CCO46_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00025;old_locus_tag=CCO46_00025 NZ_NPOH01000001.1 Protein Homology CDS 4309 5748 . + 0 ID=cds-WP_097363174.1;Parent=gene-CCO46_RS00025;Dbxref=GenBank:WP_097363174.1;Name=WP_097363174.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=CCO46_RS00025;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_097363174.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 5735 7168 . + . ID=gene-CCO46_RS00030;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=CCO46_RS00030;old_locus_tag=CCO46_00030 NZ_NPOH01000001.1 Protein Homology CDS 5735 7168 . + 0 ID=cds-WP_094882240.1;Parent=gene-CCO46_RS00030;Dbxref=GenBank:WP_094882240.1;Name=WP_094882240.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=CCO46_RS00030;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WP_094882240.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 7240 8670 . + . ID=gene-CCO46_RS00035;Name=CCO46_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00035;old_locus_tag=CCO46_00035 NZ_NPOH01000001.1 Protein Homology CDS 7240 8670 . + 0 ID=cds-WP_023202514.1;Parent=gene-CCO46_RS00035;Dbxref=GenBank:WP_023202514.1;Name=WP_023202514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=CCO46_RS00035;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WP_023202514.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 8834 10240 . + . ID=gene-CCO46_RS00040;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=CCO46_RS00040;old_locus_tag=CCO46_00040 NZ_NPOH01000001.1 Protein Homology CDS 8834 10240 . + 0 ID=cds-WP_000043533.1;Parent=gene-CCO46_RS00040;Dbxref=GenBank:WP_000043533.1;Name=WP_000043533.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=CCO46_RS00040;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043533.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 10475 11641 . + . ID=gene-CCO46_RS00050;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=CCO46_RS00050;old_locus_tag=CCO46_00050 NZ_NPOH01000001.1 Protein Homology CDS 10475 11641 . + 0 ID=cds-WP_097363175.1;Parent=gene-CCO46_RS00050;Dbxref=GenBank:WP_097363175.1;Name=WP_097363175.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=CCO46_RS00050;product=UDP-glucose 6-dehydrogenase;protein_id=WP_097363175.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 11784 12767 . + . ID=gene-CCO46_RS00055;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=CCO46_RS00055;old_locus_tag=CCO46_00055 NZ_NPOH01000001.1 Protein Homology CDS 11784 12767 . + 0 ID=cds-WP_000215251.1;Parent=gene-CCO46_RS00055;Dbxref=GenBank:WP_000215251.1;Name=WP_000215251.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=CCO46_RS00055;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_000215251.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 12848 13459 . - . ID=gene-CCO46_RS00060;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CCO46_RS00060;old_locus_tag=CCO46_00060 NZ_NPOH01000001.1 Protein Homology CDS 12848 13459 . - 0 ID=cds-WP_000954846.1;Parent=gene-CCO46_RS00060;Dbxref=GenBank:WP_000954846.1;Name=WP_000954846.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=CCO46_RS00060;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954846.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 13453 14229 . - . ID=gene-CCO46_RS00065;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CCO46_RS00065;old_locus_tag=CCO46_00065 NZ_NPOH01000001.1 Protein Homology CDS 13453 14229 . - 0 ID=cds-WP_000880125.1;Parent=gene-CCO46_RS00065;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=CCO46_RS00065;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 14211 14948 . - . ID=gene-CCO46_RS00070;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CCO46_RS00070;old_locus_tag=CCO46_00070 NZ_NPOH01000001.1 Protein Homology CDS 14211 14948 . - 0 ID=cds-WP_000586406.1;Parent=gene-CCO46_RS00070;Dbxref=GenBank:WP_000586406.1;Name=WP_000586406.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=CCO46_RS00070;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586406.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 14948 15538 . - . ID=gene-CCO46_RS00075;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CCO46_RS00075;old_locus_tag=CCO46_00075 NZ_NPOH01000001.1 Protein Homology CDS 14948 15538 . - 0 ID=cds-WP_001103591.1;Parent=gene-CCO46_RS00075;Dbxref=GenBank:WP_001103591.1;Name=WP_001103591.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=CCO46_RS00075;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103591.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 15538 16605 . - . ID=gene-CCO46_RS00080;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CCO46_RS00080;old_locus_tag=CCO46_00080 NZ_NPOH01000001.1 Protein Homology CDS 15538 16605 . - 0 ID=cds-WP_020898967.1;Parent=gene-CCO46_RS00080;Dbxref=GenBank:WP_020898967.1;Name=WP_020898967.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=CCO46_RS00080;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_020898967.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 16602 17681 . - . ID=gene-CCO46_RS00085;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CCO46_RS00085;old_locus_tag=CCO46_00085 NZ_NPOH01000001.1 Protein Homology CDS 16602 17681 . - 0 ID=cds-WP_000102715.1;Parent=gene-CCO46_RS00085;Dbxref=GenBank:WP_000102715.1;Name=WP_000102715.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=CCO46_RS00085;product=histidinol-phosphate transaminase;protein_id=WP_000102715.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 17678 18982 . - . ID=gene-CCO46_RS00090;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CCO46_RS00090;old_locus_tag=CCO46_00090 NZ_NPOH01000001.1 Protein Homology CDS 17678 18982 . - 0 ID=cds-WP_000009622.1;Parent=gene-CCO46_RS00090;Dbxref=GenBank:WP_000009622.1;Name=WP_000009622.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=CCO46_RS00090;product=histidinol dehydrogenase;protein_id=WP_000009622.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 19085 19984 . - . ID=gene-CCO46_RS00095;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CCO46_RS00095;old_locus_tag=CCO46_00095 NZ_NPOH01000001.1 Protein Homology CDS 19085 19984 . - 0 ID=cds-WP_000886600.1;Parent=gene-CCO46_RS00095;Dbxref=GenBank:WP_000886600.1;Name=WP_000886600.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=CCO46_RS00095;product=ATP phosphoribosyltransferase;protein_id=WP_000886600.1;transl_table=11 NZ_NPOH01000001.1 cmsearch sequence_feature 20031 20154 . - . ID=id-NZ_NPOH01000001.1:20031..20154;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPOH01000001.1 RefSeq gene 20130 20180 . - . ID=gene-CCO46_RS00100;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=CCO46_RS00100;old_locus_tag=CCO46_00100 NZ_NPOH01000001.1 Protein Homology CDS 20130 20180 . - 0 ID=cds-WP_001364200.1;Parent=gene-CCO46_RS00100;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=CCO46_RS00100;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 20343 21167 . + . ID=gene-CCO46_RS00105;Name=CCO46_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00105;old_locus_tag=CCO46_00105 NZ_NPOH01000001.1 Protein Homology CDS 20343 21167 . + 0 ID=cds-WP_000754712.1;Parent=gene-CCO46_RS00105;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=CCO46_RS00105;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 21213 22127 . + . ID=gene-CCO46_RS00110;Name=CCO46_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00110;old_locus_tag=CCO46_00110 NZ_NPOH01000001.1 Protein Homology CDS 21213 22127 . + 0 ID=cds-WP_000803316.1;Parent=gene-CCO46_RS00110;Dbxref=GenBank:WP_000803316.1;Name=WP_000803316.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=CCO46_RS00110;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 22361 22423 . + . ID=gene-CCO46_RS24865;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=CCO46_RS24865 NZ_NPOH01000001.1 Protein Homology CDS 22361 22423 . + 0 ID=cds-WP_096335044.1;Parent=gene-CCO46_RS24865;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=CCO46_RS24865;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 22413 23771 . + . ID=gene-CCO46_RS00115;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=CCO46_RS00115;old_locus_tag=CCO46_00115 NZ_NPOH01000001.1 Protein Homology CDS 22413 23771 . + 0 ID=cds-WP_001519005.1;Parent=gene-CCO46_RS00115;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=CCO46_RS00115;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 23907 25337 . - . ID=gene-CCO46_RS00120;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=CCO46_RS00120;old_locus_tag=CCO46_00120 NZ_NPOH01000001.1 Protein Homology CDS 23907 25337 . - 0 ID=cds-WP_000216702.1;Parent=gene-CCO46_RS00120;Dbxref=GenBank:WP_000216702.1;Name=WP_000216702.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=CCO46_RS00120;product=exodeoxyribonuclease I;protein_id=WP_000216702.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 25473 25550 . + . ID=gene-CCO46_RS25350;Name=CCO46_RS25350;end_range=25550,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25350;partial=true;pseudo=true NZ_NPOH01000001.1 Protein Homology CDS 25473 25550 . + 0 ID=cds-CCO46_RS25350;Parent=gene-CCO46_RS25350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=25550,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=CCO46_RS25350;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 25680 28028 . - . ID=gene-CCO46_RS00125;Name=CCO46_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00125;old_locus_tag=CCO46_00125 NZ_NPOH01000001.1 Protein Homology CDS 25680 28028 . - 0 ID=cds-WP_097363176.1;Parent=gene-CCO46_RS00125;Dbxref=GenBank:WP_097363176.1;Name=WP_097363176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=CCO46_RS00125;product=type III secretion system effector HECT-type E3 ubiquitin transferase;protein_id=WP_097363176.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 28295 28384 . + . ID=gene-CCO46_RS00135;Name=CCO46_RS00135;end_range=28384,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS00135;old_locus_tag=CCO46_00135;partial=true;pseudo=true;start_range=.,28295 NZ_NPOH01000001.1 Protein Homology CDS 28295 28384 . + 0 ID=cds-CCO46_RS00135;Parent=gene-CCO46_RS00135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=28384,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO46_RS00135;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,28295;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 28647 30923 . + . ID=gene-CCO46_RS00140;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=CCO46_RS00140;old_locus_tag=CCO46_00140 NZ_NPOH01000001.1 Protein Homology CDS 28647 30923 . + 0 ID=cds-WP_097363178.1;Parent=gene-CCO46_RS00140;Dbxref=GenBank:WP_097363178.1;Name=WP_097363178.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=CCO46_RS00140;product=thiosulfate reductase PhsA;protein_id=WP_097363178.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 30938 31516 . + . ID=gene-CCO46_RS00145;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=CCO46_RS00145;old_locus_tag=CCO46_00145 NZ_NPOH01000001.1 Protein Homology CDS 30938 31516 . + 0 ID=cds-WP_001016236.1;Parent=gene-CCO46_RS00145;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=CCO46_RS00145;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 31513 32277 . + . ID=gene-CCO46_RS00150;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=CCO46_RS00150;old_locus_tag=CCO46_00150 NZ_NPOH01000001.1 Protein Homology CDS 31513 32277 . + 0 ID=cds-WP_097363179.1;Parent=gene-CCO46_RS00150;Dbxref=GenBank:WP_097363179.1;Name=WP_097363179.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=CCO46_RS00150;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_097363179.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 32401 33573 . + . ID=gene-CCO46_RS00155;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=CCO46_RS00155;old_locus_tag=CCO46_00155 NZ_NPOH01000001.1 Protein Homology CDS 32401 33573 . + 0 ID=cds-WP_097363180.1;Parent=gene-CCO46_RS00155;Dbxref=GenBank:WP_097363180.1;Name=WP_097363180.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=CCO46_RS00155;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_097363180.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 33724 34191 . + . ID=gene-CCO46_RS00160;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=CCO46_RS00160;old_locus_tag=CCO46_00160 NZ_NPOH01000001.1 Protein Homology CDS 33724 34191 . + 0 ID=cds-WP_000384326.1;Parent=gene-CCO46_RS00160;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=CCO46_RS00160;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 34310 35368 . + . ID=gene-CCO46_RS00165;Name=CCO46_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00165;old_locus_tag=CCO46_00165 NZ_NPOH01000001.1 Protein Homology CDS 34310 35368 . + 0 ID=cds-WP_097363181.1;Parent=gene-CCO46_RS00165;Dbxref=GenBank:WP_097363181.1;Name=WP_097363181.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=CCO46_RS00165;product=FUSC family protein;protein_id=WP_097363181.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 35613 35948 . + . ID=gene-CCO46_RS00170;Name=CCO46_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00170;old_locus_tag=CCO46_00170 NZ_NPOH01000001.1 Protein Homology CDS 35613 35948 . + 0 ID=cds-WP_000450405.1;Parent=gene-CCO46_RS00170;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=CCO46_RS00170;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 35982 36848 . - . ID=gene-CCO46_RS00175;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=CCO46_RS00175;old_locus_tag=CCO46_00175 NZ_NPOH01000001.1 Protein Homology CDS 35982 36848 . - 0 ID=cds-WP_140439307.1;Parent=gene-CCO46_RS00175;Dbxref=GenBank:WP_140439307.1;Name=WP_140439307.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=CCO46_RS00175;product=L-threonine kinase PduX;protein_id=WP_140439307.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 36942 38156 . - . ID=gene-CCO46_RS00180;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=CCO46_RS00180;old_locus_tag=CCO46_00180 NZ_NPOH01000001.1 Protein Homology CDS 36942 38156 . - 0 ID=cds-WP_097363183.1;Parent=gene-CCO46_RS00180;Dbxref=GenBank:WP_097363183.1;Name=WP_097363183.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=CCO46_RS00180;product=propanediol utilization propionate kinase PduW;protein_id=WP_097363183.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 38141 38593 . - . ID=gene-CCO46_RS00185;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=CCO46_RS00185;old_locus_tag=CCO46_00185 NZ_NPOH01000001.1 Protein Homology CDS 38141 38593 . - 0 ID=cds-WP_000826277.1;Parent=gene-CCO46_RS00185;Dbxref=GenBank:WP_000826277.1;Name=WP_000826277.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=CCO46_RS00185;product=propanediol utilization protein PduV;protein_id=WP_000826277.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 38598 38948 . - . ID=gene-CCO46_RS00190;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=CCO46_RS00190;old_locus_tag=CCO46_00190 NZ_NPOH01000001.1 Protein Homology CDS 38598 38948 . - 0 ID=cds-WP_000441100.1;Parent=gene-CCO46_RS00190;Dbxref=GenBank:WP_000441100.1;Name=WP_000441100.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=CCO46_RS00190;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441100.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 38948 39502 . - . ID=gene-CCO46_RS00195;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=CCO46_RS00195;old_locus_tag=CCO46_00195 NZ_NPOH01000001.1 Protein Homology CDS 38948 39502 . - 0 ID=cds-WP_000075777.1;Parent=gene-CCO46_RS00195;Dbxref=GenBank:WP_000075777.1;Name=WP_000075777.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=CCO46_RS00195;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075777.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 39505 40860 . - . ID=gene-CCO46_RS00200;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=CCO46_RS00200;old_locus_tag=CCO46_00200 NZ_NPOH01000001.1 Protein Homology CDS 39505 40860 . - 0 ID=cds-WP_097363184.1;Parent=gene-CCO46_RS00200;Dbxref=GenBank:WP_097363184.1;Name=WP_097363184.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=CCO46_RS00200;product=cobalamin reductase PduS;protein_id=WP_097363184.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 40857 41969 . - . ID=gene-CCO46_RS00205;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=CCO46_RS00205;old_locus_tag=CCO46_00205 NZ_NPOH01000001.1 Protein Homology CDS 40857 41969 . - 0 ID=cds-WP_097363185.1;Parent=gene-CCO46_RS00205;Dbxref=GenBank:WP_097363185.1;Name=WP_097363185.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=CCO46_RS00205;product=1-propanol dehydrogenase PduQ;protein_id=WP_097363185.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 41981 43375 . - . ID=gene-CCO46_RS00210;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=CCO46_RS00210;old_locus_tag=CCO46_00210 NZ_NPOH01000001.1 Protein Homology CDS 41981 43375 . - 0 ID=cds-WP_097363186.1;Parent=gene-CCO46_RS00210;Dbxref=GenBank:WP_097363186.1;Name=WP_097363186.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=CCO46_RS00210;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_097363186.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 43372 44382 . - . ID=gene-CCO46_RS00215;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=CCO46_RS00215;old_locus_tag=CCO46_00215 NZ_NPOH01000001.1 Protein Homology CDS 43372 44382 . - 0 ID=cds-WP_058331800.1;Parent=gene-CCO46_RS00215;Dbxref=GenBank:WP_058331800.1;Name=WP_058331800.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=CCO46_RS00215;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_058331800.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 44392 44667 . - . ID=gene-CCO46_RS00220;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=CCO46_RS00220;old_locus_tag=CCO46_00220 NZ_NPOH01000001.1 Protein Homology CDS 44392 44667 . - 0 ID=cds-WP_000549825.1;Parent=gene-CCO46_RS00220;Dbxref=GenBank:WP_000549825.1;Name=WP_000549825.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=CCO46_RS00220;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549825.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 44671 45162 . - . ID=gene-CCO46_RS00225;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=CCO46_RS00225;old_locus_tag=CCO46_00225 NZ_NPOH01000001.1 Protein Homology CDS 44671 45162 . - 0 ID=cds-WP_001012966.1;Parent=gene-CCO46_RS00225;Dbxref=GenBank:WP_001012966.1;Name=WP_001012966.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=CCO46_RS00225;product=propanediol utilization microcompartment protein PduM;protein_id=WP_001012966.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 45159 45791 . - . ID=gene-CCO46_RS00230;Name=CCO46_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00230;old_locus_tag=CCO46_00230 NZ_NPOH01000001.1 Protein Homology CDS 45159 45791 . - 0 ID=cds-WP_097363187.1;Parent=gene-CCO46_RS00230;Dbxref=GenBank:WP_097363187.1;Name=WP_097363187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=CCO46_RS00230;product=phosphate propanoyltransferase;protein_id=WP_097363187.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 45791 46273 . - . ID=gene-CCO46_RS00235;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=CCO46_RS00235;old_locus_tag=CCO46_00235 NZ_NPOH01000001.1 Protein Homology CDS 45791 46273 . - 0 ID=cds-WP_001284385.1;Parent=gene-CCO46_RS00235;Dbxref=GenBank:WP_001284385.1;Name=WP_001284385.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=CCO46_RS00235;product=propanediol utilization microcompartment protein PduK;protein_id=WP_001284385.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 46277 46552 . - . ID=gene-CCO46_RS00240;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=CCO46_RS00240;old_locus_tag=CCO46_00240 NZ_NPOH01000001.1 Protein Homology CDS 46277 46552 . - 0 ID=cds-WP_001057755.1;Parent=gene-CCO46_RS00240;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=CCO46_RS00240;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 46571 46921 . - . ID=gene-CCO46_RS00245;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=CCO46_RS00245;old_locus_tag=CCO46_00245 NZ_NPOH01000001.1 Protein Homology CDS 46571 46921 . - 0 ID=cds-WP_097363188.1;Parent=gene-CCO46_RS00245;Dbxref=GenBank:WP_097363188.1;Name=WP_097363188.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=CCO46_RS00245;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_097363188.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 46911 48743 . - . ID=gene-CCO46_RS00250;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=CCO46_RS00250;old_locus_tag=CCO46_00250 NZ_NPOH01000001.1 Protein Homology CDS 46911 48743 . - 0 ID=cds-WP_097363189.1;Parent=gene-CCO46_RS00250;Dbxref=GenBank:WP_097363189.1;Name=WP_097363189.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=CCO46_RS00250;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_097363189.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 48759 49280 . - . ID=gene-CCO46_RS00255;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=CCO46_RS00255;old_locus_tag=CCO46_00255 NZ_NPOH01000001.1 Protein Homology CDS 48759 49280 . - 0 ID=cds-WP_001090598.1;Parent=gene-CCO46_RS00255;Dbxref=GenBank:WP_001090598.1;Name=WP_001090598.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=CCO46_RS00255;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090598.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 49295 49969 . - . ID=gene-CCO46_RS00260;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=CCO46_RS00260;old_locus_tag=CCO46_00260 NZ_NPOH01000001.1 Protein Homology CDS 49295 49969 . - 0 ID=cds-WP_097363190.1;Parent=gene-CCO46_RS00260;Dbxref=GenBank:WP_097363190.1;Name=WP_097363190.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=CCO46_RS00260;product=propanediol dehydratase medium subunit PduD;protein_id=WP_097363190.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 49980 51644 . - . ID=gene-CCO46_RS00265;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=CCO46_RS00265;old_locus_tag=CCO46_00265 NZ_NPOH01000001.1 Protein Homology CDS 49980 51644 . - 0 ID=cds-WP_097363191.1;Parent=gene-CCO46_RS00265;Dbxref=GenBank:WP_097363191.1;Name=WP_097363191.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=CCO46_RS00265;product=propanediol dehydratase large subunit PduC;protein_id=WP_097363191.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 51663 52475 . - . ID=gene-CCO46_RS00270;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=CCO46_RS00270;old_locus_tag=CCO46_00270 NZ_NPOH01000001.1 Protein Homology CDS 51663 52475 . - 0 ID=cds-WP_097363192.1;Parent=gene-CCO46_RS00270;Dbxref=GenBank:WP_097363192.1;Name=WP_097363192.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=CCO46_RS00270;product=propanediol utilization microcompartment protein PduB;protein_id=WP_097363192.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 52472 52756 . - . ID=gene-CCO46_RS00275;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=CCO46_RS00275;old_locus_tag=CCO46_00275 NZ_NPOH01000001.1 Protein Homology CDS 52472 52756 . - 0 ID=cds-WP_001183618.1;Parent=gene-CCO46_RS00275;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=CCO46_RS00275;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 53281 54075 . + . ID=gene-CCO46_RS00280;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=CCO46_RS00280;old_locus_tag=CCO46_00280 NZ_NPOH01000001.1 Protein Homology CDS 53281 54075 . + 0 ID=cds-WP_097363193.1;Parent=gene-CCO46_RS00280;Dbxref=GenBank:WP_097363193.1;Name=WP_097363193.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=CCO46_RS00280;product=propanediol diffusion facilitator PduF;protein_id=WP_097363193.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 54292 55203 . + . ID=gene-CCO46_RS00285;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=CCO46_RS00285;old_locus_tag=CCO46_00285 NZ_NPOH01000001.1 Protein Homology CDS 54292 55203 . + 0 ID=cds-WP_097363194.1;Parent=gene-CCO46_RS00285;Dbxref=GenBank:WP_097363194.1;Name=WP_097363194.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=CCO46_RS00285;product=transcriptional regulator PocR;protein_id=WP_097363194.1;transl_table=11 NZ_NPOH01000001.1 cmsearch riboswitch 55529 55703 . + . ID=id-NZ_NPOH01000001.1:55529..55703;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPOH01000001.1 RefSeq gene 55801 57180 . + . ID=gene-CCO46_RS00290;Name=CCO46_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00290;old_locus_tag=CCO46_00290 NZ_NPOH01000001.1 Protein Homology CDS 55801 57180 . + 0 ID=cds-WP_097363195.1;Parent=gene-CCO46_RS00290;Dbxref=GenBank:WP_097363195.1;Name=WP_097363195.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=CCO46_RS00290;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_097363195.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 57177 58136 . + . ID=gene-CCO46_RS00295;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=CCO46_RS00295;old_locus_tag=CCO46_00295 NZ_NPOH01000001.1 Protein Homology CDS 57177 58136 . + 0 ID=cds-WP_000153654.1;Parent=gene-CCO46_RS00295;Dbxref=GenBank:WP_000153654.1;Name=WP_000153654.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=CCO46_RS00295;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153654.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 58147 58779 . + . ID=gene-CCO46_RS00300;Name=CCO46_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00300;old_locus_tag=CCO46_00300 NZ_NPOH01000001.1 Protein Homology CDS 58147 58779 . + 0 ID=cds-WP_023214779.1;Parent=gene-CCO46_RS00300;Dbxref=GenBank:WP_023214779.1;Name=WP_023214779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=CCO46_RS00300;product=cobalt-precorrin-8 methylmutase;protein_id=WP_023214779.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 58779 59918 . + . ID=gene-CCO46_RS00305;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=CCO46_RS00305;old_locus_tag=CCO46_00305 NZ_NPOH01000001.1 Protein Homology CDS 58779 59918 . + 0 ID=cds-WP_097363196.1;Parent=gene-CCO46_RS00305;Dbxref=GenBank:WP_097363196.1;Name=WP_097363196.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=CCO46_RS00305;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_097363196.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 59912 60517 . + . ID=gene-CCO46_RS00310;Name=CCO46_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00310;old_locus_tag=CCO46_00310 NZ_NPOH01000001.1 Protein Homology CDS 59912 60517 . + 0 ID=cds-WP_000958841.1;Parent=gene-CCO46_RS00310;Dbxref=GenBank:WP_000958841.1;Name=WP_000958841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=CCO46_RS00310;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958841.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 60507 61085 . + . ID=gene-CCO46_RS00315;Name=CCO46_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00315;old_locus_tag=CCO46_00315 NZ_NPOH01000001.1 Protein Homology CDS 60507 61085 . + 0 ID=cds-WP_000650989.1;Parent=gene-CCO46_RS00315;Dbxref=GenBank:WP_000650989.1;Name=WP_000650989.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=CCO46_RS00315;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000650989.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 61069 61842 . + . ID=gene-CCO46_RS00320;Name=CCO46_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00320;old_locus_tag=CCO46_00320 NZ_NPOH01000001.1 Protein Homology CDS 61069 61842 . + 0 ID=cds-WP_023219321.1;Parent=gene-CCO46_RS00320;Dbxref=GenBank:WP_023219321.1;Name=WP_023219321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=CCO46_RS00320;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_023219321.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 61823 62878 . + . ID=gene-CCO46_RS00325;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=CCO46_RS00325;old_locus_tag=CCO46_00325 NZ_NPOH01000001.1 Protein Homology CDS 61823 62878 . + 0 ID=cds-WP_001098914.1;Parent=gene-CCO46_RS00325;Dbxref=GenBank:WP_001098914.1;Name=WP_001098914.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=CCO46_RS00325;product=cobalt-precorrin 5A hydrolase;protein_id=WP_001098914.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 62878 63603 . + . ID=gene-CCO46_RS00330;Name=CCO46_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00330;old_locus_tag=CCO46_00330 NZ_NPOH01000001.1 Protein Homology CDS 62878 63603 . + 0 ID=cds-WP_058331795.1;Parent=gene-CCO46_RS00330;Dbxref=GenBank:WP_058331795.1;Name=WP_058331795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=CCO46_RS00330;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_058331795.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 63600 64391 . + . ID=gene-CCO46_RS00335;Name=CCO46_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00335;old_locus_tag=CCO46_00335 NZ_NPOH01000001.1 Protein Homology CDS 63600 64391 . + 0 ID=cds-WP_001001975.1;Parent=gene-CCO46_RS00335;Dbxref=GenBank:WP_001001975.1;Name=WP_001001975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=CCO46_RS00335;product=cobalt-precorrin-6A reductase;protein_id=WP_001001975.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 64394 65188 . + . ID=gene-CCO46_RS00340;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=CCO46_RS00340;old_locus_tag=CCO46_00340 NZ_NPOH01000001.1 Protein Homology CDS 64394 65188 . + 0 ID=cds-WP_000709784.1;Parent=gene-CCO46_RS00340;Dbxref=GenBank:WP_000709784.1;Name=WP_000709784.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=CCO46_RS00340;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709784.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 65185 65898 . + . ID=gene-CCO46_RS00345;Name=CCO46_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00345;old_locus_tag=CCO46_00345 NZ_NPOH01000001.1 Protein Homology CDS 65185 65898 . + 0 ID=cds-WP_001013550.1;Parent=gene-CCO46_RS00345;Dbxref=GenBank:WP_001013550.1;Name=WP_001013550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=CCO46_RS00345;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013550.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 65895 66632 . + . ID=gene-CCO46_RS00350;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=CCO46_RS00350;old_locus_tag=CCO46_00350 NZ_NPOH01000001.1 Protein Homology CDS 65895 66632 . + 0 ID=cds-WP_000764336.1;Parent=gene-CCO46_RS00350;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=CCO46_RS00350;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 66634 66915 . + . ID=gene-CCO46_RS00355;Name=CCO46_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00355;old_locus_tag=CCO46_00355 NZ_NPOH01000001.1 Protein Homology CDS 66634 66915 . + 0 ID=cds-WP_000753214.1;Parent=gene-CCO46_RS00355;Dbxref=GenBank:WP_000753214.1;Name=WP_000753214.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=CCO46_RS00355;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753214.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 66902 67579 . + . ID=gene-CCO46_RS00360;Name=CCO46_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00360;old_locus_tag=CCO46_00360 NZ_NPOH01000001.1 Protein Homology CDS 66902 67579 . + 0 ID=cds-WP_058331794.1;Parent=gene-CCO46_RS00360;Dbxref=GenBank:WP_058331794.1;Name=WP_058331794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=CCO46_RS00360;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_058331794.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 67588 68403 . + . ID=gene-CCO46_RS00365;Name=CCO46_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00365;old_locus_tag=CCO46_00365 NZ_NPOH01000001.1 Protein Homology CDS 67588 68403 . + 0 ID=cds-WP_000881542.1;Parent=gene-CCO46_RS00365;Dbxref=GenBank:WP_000881542.1;Name=WP_000881542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=CCO46_RS00365;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881542.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 68400 69920 . + . ID=gene-CCO46_RS00370;Name=CCO46_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00370;old_locus_tag=CCO46_00370 NZ_NPOH01000001.1 Protein Homology CDS 68400 69920 . + 0 ID=cds-WP_023137988.1;Parent=gene-CCO46_RS00370;Dbxref=GenBank:WP_023137988.1;Name=WP_023137988.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=CCO46_RS00370;product=cobyric acid synthase;protein_id=WP_023137988.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 69917 70462 . + . ID=gene-CCO46_RS00375;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=CCO46_RS00375;old_locus_tag=CCO46_00375 NZ_NPOH01000001.1 Protein Homology CDS 69917 70462 . + 0 ID=cds-WP_000973145.1;Parent=gene-CCO46_RS00375;Dbxref=GenBank:WP_000973145.1;Name=WP_000973145.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=CCO46_RS00375;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973145.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 70459 71202 . + . ID=gene-CCO46_RS00380;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=CCO46_RS00380;old_locus_tag=CCO46_00380 NZ_NPOH01000001.1 Protein Homology CDS 70459 71202 . + 0 ID=cds-WP_001808088.1;Parent=gene-CCO46_RS00380;Dbxref=GenBank:WP_001808088.1;Name=WP_001808088.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=CCO46_RS00380;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_001808088.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 71229 72299 . + . ID=gene-CCO46_RS00385;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=CCO46_RS00385;old_locus_tag=CCO46_00385 NZ_NPOH01000001.1 Protein Homology CDS 71229 72299 . + 0 ID=cds-WP_058331793.1;Parent=gene-CCO46_RS00385;Dbxref=GenBank:WP_058331793.1;Name=WP_058331793.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=CCO46_RS00385;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_058331793.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 72377 73306 . + . ID=gene-CCO46_RS00390;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=CCO46_RS00390;old_locus_tag=CCO46_00390 NZ_NPOH01000001.1 Protein Homology CDS 72377 73306 . + 0 ID=cds-WP_001252817.1;Parent=gene-CCO46_RS00390;Dbxref=GenBank:WP_001252817.1;Name=WP_001252817.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=CCO46_RS00390;product=L%2CD-transpeptidase;protein_id=WP_001252817.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 73531 73606 . - . ID=gene-CCO46_RS00395;Name=CCO46_RS00395;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS00395;old_locus_tag=CCO46_00395 NZ_NPOH01000001.1 tRNAscan-SE tRNA 73531 73606 . - . ID=rna-CCO46_RS00395;Parent=gene-CCO46_RS00395;anticodon=(pos:complement(73571..73573));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00395;product=tRNA-Asn NZ_NPOH01000001.1 tRNAscan-SE exon 73531 73606 . - . ID=exon-CCO46_RS00395-1;Parent=rna-CCO46_RS00395;anticodon=(pos:complement(73571..73573));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00395;product=tRNA-Asn NZ_NPOH01000001.1 RefSeq gene 73766 75223 . + . ID=gene-CCO46_RS00400;Name=CCO46_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00400;old_locus_tag=CCO46_00400 NZ_NPOH01000001.1 Protein Homology CDS 73766 75223 . + 0 ID=cds-WP_001538409.1;Parent=gene-CCO46_RS00400;Dbxref=GenBank:WP_001538409.1;Name=WP_001538409.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=CCO46_RS00400;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_001538409.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 75364 75439 . + . ID=gene-CCO46_RS00405;Name=CCO46_RS00405;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS00405;old_locus_tag=CCO46_00405 NZ_NPOH01000001.1 tRNAscan-SE tRNA 75364 75439 . + . ID=rna-CCO46_RS00405;Parent=gene-CCO46_RS00405;anticodon=(pos:75397..75399);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00405;product=tRNA-Asn NZ_NPOH01000001.1 tRNAscan-SE exon 75364 75439 . + . ID=exon-CCO46_RS00405-1;Parent=rna-CCO46_RS00405;anticodon=(pos:75397..75399);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00405;product=tRNA-Asn NZ_NPOH01000001.1 RefSeq pseudogene 75858 76321 . + . ID=gene-CCO46_RS00415;Name=CCO46_RS00415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS00415;old_locus_tag=CCO46_00415;pseudo=true NZ_NPOH01000001.1 Protein Homology CDS 75858 76321 . + 0 ID=cds-CCO46_RS00415;Parent=gene-CCO46_RS00415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=CCO46_RS00415;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 76315 76641 . + . ID=gene-CCO46_RS00420;Name=CCO46_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00420;old_locus_tag=CCO46_00420 NZ_NPOH01000001.1 Protein Homology CDS 76315 76641 . + 0 ID=cds-WP_000228159.1;Parent=gene-CCO46_RS00420;Dbxref=GenBank:WP_000228159.1;Name=WP_000228159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=CCO46_RS00420;product=DUF1493 family protein;protein_id=WP_000228159.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 76630 76791 . - . ID=gene-CCO46_RS00425;Name=CCO46_RS00425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS00425;old_locus_tag=CCO46_00425;pseudo=true NZ_NPOH01000001.1 Protein Homology CDS 76630 76791 . - 0 ID=cds-CCO46_RS00425;Parent=gene-CCO46_RS00425;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=CCO46_RS00425;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 76837 78291 . + . ID=gene-CCO46_RS00430;Name=CCO46_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00430;old_locus_tag=CCO46_00430 NZ_NPOH01000001.1 Protein Homology CDS 76837 78291 . + 0 ID=cds-WP_000428191.1;Parent=gene-CCO46_RS00430;Dbxref=GenBank:WP_000428191.1;Name=WP_000428191.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=CCO46_RS00430;product=AMP nucleosidase;protein_id=WP_000428191.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 79194 79751 . - . ID=gene-CCO46_RS00440;Name=CCO46_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00440;old_locus_tag=CCO46_00440 NZ_NPOH01000001.1 Protein Homology CDS 79194 79751 . - 0 ID=cds-WP_024798295.1;Parent=gene-CCO46_RS00440;Dbxref=GenBank:WP_024798295.1;Name=WP_024798295.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751883.1;locus_tag=CCO46_RS00440;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_024798295.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 79866 80207 . + . ID=gene-CCO46_RS00445;Name=CCO46_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00445;old_locus_tag=CCO46_00445 NZ_NPOH01000001.1 Protein Homology CDS 79866 80207 . + 0 ID=cds-WP_023226656.1;Parent=gene-CCO46_RS00445;Dbxref=GenBank:WP_023226656.1;Name=WP_023226656.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000967787.1;locus_tag=CCO46_RS00445;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_023226656.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 80525 80806 . - . ID=gene-CCO46_RS25690;Name=CCO46_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25690 NZ_NPOH01000001.1 Protein Homology CDS 80525 80806 . - 0 ID=cds-WP_306292002.1;Parent=gene-CCO46_RS25690;Dbxref=GenBank:WP_306292002.1;Name=WP_306292002.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835997.1;locus_tag=CCO46_RS25690;product=Arm DNA-binding domain-containing protein;protein_id=WP_306292002.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 80970 81045 . - . ID=gene-CCO46_RS00465;Name=CCO46_RS00465;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS00465;old_locus_tag=CCO46_00465 NZ_NPOH01000001.1 tRNAscan-SE tRNA 80970 81045 . - . ID=rna-CCO46_RS00465;Parent=gene-CCO46_RS00465;anticodon=(pos:complement(81010..81012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00465;product=tRNA-Asn NZ_NPOH01000001.1 tRNAscan-SE exon 80970 81045 . - . ID=exon-CCO46_RS00465-1;Parent=rna-CCO46_RS00465;anticodon=(pos:complement(81010..81012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00465;product=tRNA-Asn NZ_NPOH01000001.1 RefSeq pseudogene 81467 81772 . - . ID=gene-CCO46_RS00470;Name=CCO46_RS00470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS00470;old_locus_tag=CCO46_00470;partial=true;pseudo=true;start_range=.,81467 NZ_NPOH01000001.1 Protein Homology CDS 81467 81772 . - 0 ID=cds-CCO46_RS00470;Parent=gene-CCO46_RS00470;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=CCO46_RS00470;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,81467;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 81940 82015 . - . ID=gene-CCO46_RS00475;Name=CCO46_RS00475;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS00475;old_locus_tag=CCO46_00475 NZ_NPOH01000001.1 tRNAscan-SE tRNA 81940 82015 . - . ID=rna-CCO46_RS00475;Parent=gene-CCO46_RS00475;anticodon=(pos:complement(81980..81982));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00475;product=tRNA-Asn NZ_NPOH01000001.1 tRNAscan-SE exon 81940 82015 . - . ID=exon-CCO46_RS00475-1;Parent=rna-CCO46_RS00475;anticodon=(pos:complement(81980..81982));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00475;product=tRNA-Asn NZ_NPOH01000001.1 RefSeq gene 82116 82913 . - . ID=gene-CCO46_RS00480;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=CCO46_RS00480;old_locus_tag=CCO46_00480 NZ_NPOH01000001.1 Protein Homology CDS 82116 82913 . - 0 ID=cds-WP_000598920.1;Parent=gene-CCO46_RS00480;Dbxref=GenBank:WP_000598920.1;Name=WP_000598920.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=CCO46_RS00480;product=DgsA anti-repressor MtfA;protein_id=WP_000598920.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 83002 83091 . + . ID=gene-CCO46_RS00485;Name=CCO46_RS00485;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS00485;old_locus_tag=CCO46_00485 NZ_NPOH01000001.1 tRNAscan-SE tRNA 83002 83091 . + . ID=rna-CCO46_RS00485;Parent=gene-CCO46_RS00485;anticodon=(pos:83036..83038);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00485;product=tRNA-Ser NZ_NPOH01000001.1 tRNAscan-SE exon 83002 83091 . + . ID=exon-CCO46_RS00485-1;Parent=rna-CCO46_RS00485;anticodon=(pos:83036..83038);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00485;product=tRNA-Ser NZ_NPOH01000001.1 RefSeq gene 83669 84088 . + . ID=gene-CCO46_RS00500;Name=CCO46_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00500;old_locus_tag=CCO46_00500 NZ_NPOH01000001.1 Protein Homology CDS 83669 84088 . + 0 ID=cds-WP_023200548.1;Parent=gene-CCO46_RS00500;Dbxref=GenBank:WP_023200548.1;Name=WP_023200548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=CCO46_RS00500;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_023200548.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 84091 85359 . + . ID=gene-CCO46_RS00505;Name=CCO46_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00505;old_locus_tag=CCO46_00505 NZ_NPOH01000001.1 Protein Homology CDS 84091 85359 . + 0 ID=cds-WP_000457665.1;Parent=gene-CCO46_RS00505;Dbxref=GenBank:WP_000457665.1;Name=WP_000457665.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO46_RS00505;product=Y-family DNA polymerase;protein_id=WP_000457665.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 85815 86027 . + . ID=gene-CCO46_RS00510;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO46_RS00510;old_locus_tag=CCO46_00510 NZ_NPOH01000001.1 Protein Homology CDS 85815 86027 . + 0 ID=cds-WP_000208509.1;Parent=gene-CCO46_RS00510;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=CCO46_RS00510;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 86038 86226 . + . ID=gene-CCO46_RS00515;Name=CCO46_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00515;old_locus_tag=CCO46_00515 NZ_NPOH01000001.1 Protein Homology CDS 86038 86226 . + 0 ID=cds-WP_024131163.1;Parent=gene-CCO46_RS00515;Dbxref=GenBank:WP_024131163.1;Name=WP_024131163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=CCO46_RS00515;product=hypothetical protein;protein_id=WP_024131163.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 86486 87682 . - . ID=gene-CCO46_RS00520;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=CCO46_RS00520;old_locus_tag=CCO46_00520 NZ_NPOH01000001.1 Protein Homology CDS 86486 87682 . - 0 ID=cds-WP_058331792.1;Parent=gene-CCO46_RS00520;Dbxref=GenBank:WP_058331792.1;Name=WP_058331792.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=CCO46_RS00520;product=porin OmpS1;protein_id=WP_058331792.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 88333 88644 . + . ID=gene-CCO46_RS00525;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=CCO46_RS00525;old_locus_tag=CCO46_00525 NZ_NPOH01000001.1 Protein Homology CDS 88333 88644 . + 0 ID=cds-WP_000107434.1;Parent=gene-CCO46_RS00525;Dbxref=GenBank:WP_000107434.1;Name=WP_000107434.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=CCO46_RS00525;product=cell division protein DrpB;protein_id=WP_000107434.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 88724 89419 . + . ID=gene-CCO46_RS00530;Name=CCO46_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00530;old_locus_tag=CCO46_00530 NZ_NPOH01000001.1 Protein Homology CDS 88724 89419 . + 0 ID=cds-WP_000377038.1;Parent=gene-CCO46_RS00530;Dbxref=GenBank:WP_000377038.1;Name=WP_000377038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=CCO46_RS00530;product=phosphohydrolase;protein_id=WP_000377038.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 89493 90923 . + . ID=gene-CCO46_RS00535;Name=CCO46_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00535;old_locus_tag=CCO46_00535 NZ_NPOH01000001.1 Protein Homology CDS 89493 90923 . + 0 ID=cds-WP_023201529.1;Parent=gene-CCO46_RS00535;Dbxref=GenBank:WP_023201529.1;Name=WP_023201529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=CCO46_RS00535;product=DNA cytosine methyltransferase;protein_id=WP_023201529.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 90904 91374 . + . ID=gene-CCO46_RS00540;Name=CCO46_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00540;old_locus_tag=CCO46_00540 NZ_NPOH01000001.1 Protein Homology CDS 90904 91374 . + 0 ID=cds-WP_000785978.1;Parent=gene-CCO46_RS00540;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=CCO46_RS00540;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 91363 92283 . - . ID=gene-CCO46_RS00545;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=CCO46_RS00545;old_locus_tag=CCO46_00545 NZ_NPOH01000001.1 Protein Homology CDS 91363 92283 . - 0 ID=cds-WP_001212263.1;Parent=gene-CCO46_RS00545;Dbxref=GenBank:WP_001212263.1;Name=WP_001212263.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=CCO46_RS00545;product=drug/metabolite exporter YedA;protein_id=WP_001212263.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 92453 93370 . + . ID=gene-CCO46_RS00550;Name=CCO46_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00550;old_locus_tag=CCO46_00550 NZ_NPOH01000001.1 Protein Homology CDS 92453 93370 . + 0 ID=cds-WP_085920526.1;Parent=gene-CCO46_RS00550;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=CCO46_RS00550;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 93447 93632 . + . ID=gene-CCO46_RS00555;Name=CCO46_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00555;old_locus_tag=CCO46_00555 NZ_NPOH01000001.1 Protein Homology CDS 93447 93632 . + 0 ID=cds-WP_000232161.1;Parent=gene-CCO46_RS00555;Dbxref=GenBank:WP_000232161.1;Name=WP_000232161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=CCO46_RS00555;product=YodC family protein;protein_id=WP_000232161.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 93797 95509 . + . ID=gene-CCO46_RS00560;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=CCO46_RS00560;old_locus_tag=CCO46_00560 NZ_NPOH01000001.1 Protein Homology CDS 93797 95509 . + 0 ID=cds-WP_001119828.1;Parent=gene-CCO46_RS00560;Dbxref=GenBank:WP_001119828.1;Name=WP_001119828.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=CCO46_RS00560;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001119828.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 95488 96303 . - . ID=gene-CCO46_RS00565;Name=CCO46_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00565;old_locus_tag=CCO46_00565 NZ_NPOH01000001.1 Protein Homology CDS 95488 96303 . - 0 ID=cds-WP_000948786.1;Parent=gene-CCO46_RS00565;Dbxref=GenBank:WP_000948786.1;Name=WP_000948786.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=CCO46_RS00565;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948786.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 96613 96840 . - . ID=gene-CCO46_RS00570;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=CCO46_RS00570;old_locus_tag=CCO46_00570 NZ_NPOH01000001.1 Protein Homology CDS 96613 96840 . - 0 ID=cds-WP_000844798.1;Parent=gene-CCO46_RS00570;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=CCO46_RS00570;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 96969 97163 . + . ID=gene-CCO46_RS00575;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=CCO46_RS00575;old_locus_tag=CCO46_00575 NZ_NPOH01000001.1 Protein Homology CDS 96969 97163 . + 0 ID=cds-WP_000867218.1;Parent=gene-CCO46_RS00575;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=CCO46_RS00575;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 97202 97825 . - . ID=gene-CCO46_RS00580;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=CCO46_RS00580;old_locus_tag=CCO46_00580 NZ_NPOH01000001.1 Protein Homology CDS 97202 97825 . - 0 ID=cds-WP_000103974.1;Parent=gene-CCO46_RS00580;Dbxref=GenBank:WP_000103974.1;Name=WP_000103974.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=CCO46_RS00580;product=transcriptional regulator RcsA;protein_id=WP_000103974.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 98106 98900 . - . ID=gene-CCO46_RS00585;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=CCO46_RS00585;old_locus_tag=CCO46_00585 NZ_NPOH01000001.1 Protein Homology CDS 98106 98900 . - 0 ID=cds-WP_000616953.1;Parent=gene-CCO46_RS00585;Dbxref=GenBank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=CCO46_RS00585;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 98909 99178 . - . ID=gene-CCO46_RS00590;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=CCO46_RS00590;old_locus_tag=CCO46_00590 NZ_NPOH01000001.1 Protein Homology CDS 98909 99178 . - 0 ID=cds-WP_000187355.1;Parent=gene-CCO46_RS00590;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=CCO46_RS00590;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 99188 99925 . - . ID=gene-CCO46_RS00595;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=CCO46_RS00595;old_locus_tag=CCO46_00595 NZ_NPOH01000001.1 Protein Homology CDS 99188 99925 . - 0 ID=cds-WP_001253411.1;Parent=gene-CCO46_RS00595;Dbxref=GenBank:WP_001253411.1;Name=WP_001253411.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=CCO46_RS00595;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253411.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 99925 100302 . - . ID=gene-CCO46_RS00600;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=CCO46_RS00600;old_locus_tag=CCO46_00600 NZ_NPOH01000001.1 Protein Homology CDS 99925 100302 . - 0 ID=cds-WP_000978276.1;Parent=gene-CCO46_RS00600;Dbxref=GenBank:WP_000978276.1;Name=WP_000978276.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=CCO46_RS00600;product=flagellar biosynthetic protein FliO;protein_id=WP_000978276.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 100302 100715 . - . ID=gene-CCO46_RS00605;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=CCO46_RS00605;old_locus_tag=CCO46_00605 NZ_NPOH01000001.1 Protein Homology CDS 100302 100715 . - 0 ID=cds-WP_001282111.1;Parent=gene-CCO46_RS00605;Dbxref=GenBank:WP_001282111.1;Name=WP_001282111.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=CCO46_RS00605;product=flagellar motor switch protein FliN;protein_id=WP_001282111.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 100712 101716 . - . ID=gene-CCO46_RS00610;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=CCO46_RS00610;old_locus_tag=CCO46_00610 NZ_NPOH01000001.1 Protein Homology CDS 100712 101716 . - 0 ID=cds-WP_000502811.1;Parent=gene-CCO46_RS00610;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=CCO46_RS00610;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 101721 102188 . - . ID=gene-CCO46_RS00615;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=CCO46_RS00615;old_locus_tag=CCO46_00615 NZ_NPOH01000001.1 Protein Homology CDS 101721 102188 . - 0 ID=cds-WP_000132169.1;Parent=gene-CCO46_RS00615;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=CCO46_RS00615;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 102293 103516 . - . ID=gene-CCO46_RS00620;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=CCO46_RS00620;old_locus_tag=CCO46_00620 NZ_NPOH01000001.1 Protein Homology CDS 102293 103516 . - 0 ID=cds-WP_058331791.1;Parent=gene-CCO46_RS00620;Dbxref=GenBank:WP_058331791.1;Name=WP_058331791.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=CCO46_RS00620;product=flagellar hook length control protein FliK;protein_id=WP_058331791.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 103513 103956 . - . ID=gene-CCO46_RS00625;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=CCO46_RS00625;old_locus_tag=CCO46_00625 NZ_NPOH01000001.1 Protein Homology CDS 103513 103956 . - 0 ID=cds-WP_000046982.1;Parent=gene-CCO46_RS00625;Dbxref=GenBank:WP_000046982.1;Name=WP_000046982.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=CCO46_RS00625;product=flagellar export protein FliJ;protein_id=WP_000046982.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 103978 105348 . - . ID=gene-CCO46_RS00630;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=CCO46_RS00630;old_locus_tag=CCO46_00630 NZ_NPOH01000001.1 Protein Homology CDS 103978 105348 . - 0 ID=cds-WP_000213257.1;Parent=gene-CCO46_RS00630;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=CCO46_RS00630;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 105348 106055 . - . ID=gene-CCO46_RS00635;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=CCO46_RS00635;old_locus_tag=CCO46_00635 NZ_NPOH01000001.1 Protein Homology CDS 105348 106055 . - 0 ID=cds-WP_000064163.1;Parent=gene-CCO46_RS00635;Dbxref=GenBank:WP_000064163.1;Name=WP_000064163.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=CCO46_RS00635;product=flagellar assembly protein FliH;protein_id=WP_000064163.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 106048 107043 . - . ID=gene-CCO46_RS00640;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=CCO46_RS00640;old_locus_tag=CCO46_00640 NZ_NPOH01000001.1 Protein Homology CDS 106048 107043 . - 0 ID=cds-WP_000067735.1;Parent=gene-CCO46_RS00640;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=CCO46_RS00640;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 107036 108724 . - . ID=gene-CCO46_RS00645;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=CCO46_RS00645;old_locus_tag=CCO46_00645 NZ_NPOH01000001.1 Protein Homology CDS 107036 108724 . - 0 ID=cds-WP_057394406.1;Parent=gene-CCO46_RS00645;Dbxref=GenBank:WP_057394406.1;Name=WP_057394406.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=CCO46_RS00645;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_057394406.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 108941 109255 . + . ID=gene-CCO46_RS00650;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=CCO46_RS00650;old_locus_tag=CCO46_00650 NZ_NPOH01000001.1 Protein Homology CDS 108941 109255 . + 0 ID=cds-WP_000719037.1;Parent=gene-CCO46_RS00650;Dbxref=GenBank:WP_000719037.1;Name=WP_000719037.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=CCO46_RS00650;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719037.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 109376 109762 . - . ID=gene-CCO46_RS00655;Name=CCO46_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00655;old_locus_tag=CCO46_00655 NZ_NPOH01000001.1 Protein Homology CDS 109376 109762 . - 0 ID=cds-WP_077905134.1;Parent=gene-CCO46_RS00655;Dbxref=GenBank:WP_077905134.1;Name=WP_077905134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=CCO46_RS00655;product=hypothetical protein;protein_id=WP_077905134.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 110027 110260 . - . ID=gene-CCO46_RS00660;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=CCO46_RS00660;old_locus_tag=CCO46_00660 NZ_NPOH01000001.1 Protein Homology CDS 110027 110260 . - 0 ID=cds-WP_000790504.1;Parent=gene-CCO46_RS00660;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=CCO46_RS00660;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 110257 111462 . - . ID=gene-CCO46_RS00665;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=CCO46_RS00665;old_locus_tag=CCO46_00665 NZ_NPOH01000001.1 Protein Homology CDS 110257 111462 . - 0 ID=cds-WP_001535037.1;Parent=gene-CCO46_RS00665;Dbxref=GenBank:WP_001535037.1;Name=WP_001535037.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=CCO46_RS00665;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001535037.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 111648 112061 . + . ID=gene-CCO46_RS00670;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=CCO46_RS00670;old_locus_tag=CCO46_00670 NZ_NPOH01000001.1 Protein Homology CDS 111648 112061 . + 0 ID=cds-WP_000754694.1;Parent=gene-CCO46_RS00670;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=CCO46_RS00670;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 112101 113585 . - . ID=gene-CCO46_RS00675;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=CCO46_RS00675;old_locus_tag=CCO46_00675 NZ_NPOH01000001.1 Protein Homology CDS 112101 113585 . - 0 ID=cds-WP_080160592.1;Parent=gene-CCO46_RS00675;Dbxref=GenBank:WP_080160592.1;Name=WP_080160592.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=CCO46_RS00675;product=alpha-amylase;protein_id=WP_080160592.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 113657 114025 . - . ID=gene-CCO46_RS00680;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=CCO46_RS00680;old_locus_tag=CCO46_00680 NZ_NPOH01000001.1 Protein Homology CDS 113657 114025 . - 0 ID=cds-WP_000204899.1;Parent=gene-CCO46_RS00680;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=CCO46_RS00680;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 114025 114432 . - . ID=gene-CCO46_RS00685;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=CCO46_RS00685;old_locus_tag=CCO46_00685 NZ_NPOH01000001.1 Protein Homology CDS 114025 114432 . - 0 ID=cds-WP_000287764.1;Parent=gene-CCO46_RS00685;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=CCO46_RS00685;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 114447 115853 . - . ID=gene-CCO46_RS00690;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=CCO46_RS00690;old_locus_tag=CCO46_00690 NZ_NPOH01000001.1 Protein Homology CDS 114447 115853 . - 0 ID=cds-WP_023137969.1;Parent=gene-CCO46_RS00690;Dbxref=GenBank:WP_023137969.1;Name=WP_023137969.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=CCO46_RS00690;product=flagellar filament capping protein FliD;protein_id=WP_023137969.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 115852 116091 . + . ID=gene-CCO46_RS00695;Name=CCO46_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00695;old_locus_tag=CCO46_00695 NZ_NPOH01000001.1 GeneMarkS-2+ CDS 115852 116091 . + 0 ID=cds-WP_001141165.1;Parent=gene-CCO46_RS00695;Dbxref=GenBank:WP_001141165.1;Name=WP_001141165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS00695;product=hypothetical protein;protein_id=WP_001141165.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 116109 117626 . + . ID=gene-CCO46_RS00700;Name=CCO46_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00700;old_locus_tag=CCO46_00700 NZ_NPOH01000001.1 Protein Homology CDS 116109 117626 . + 0 ID=cds-WP_000079833.1;Parent=gene-CCO46_RS00700;Dbxref=GenBank:WP_000079833.1;Name=WP_000079833.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079837.1;locus_tag=CCO46_RS00700;product=flagellin;protein_id=WP_000079833.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 117705 118910 . + . ID=gene-CCO46_RS00705;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=CCO46_RS00705;old_locus_tag=CCO46_00705 NZ_NPOH01000001.1 Protein Homology CDS 117705 118910 . + 0 ID=cds-WP_058331790.1;Parent=gene-CCO46_RS00705;Dbxref=GenBank:WP_058331790.1;Name=WP_058331790.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=CCO46_RS00705;product=flagellin lysine-N-methylase;protein_id=WP_058331790.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 119107 119826 . + . ID=gene-CCO46_RS00710;Name=CCO46_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00710;old_locus_tag=CCO46_00710 NZ_NPOH01000001.1 Protein Homology CDS 119107 119826 . + 0 ID=cds-WP_001087453.1;Parent=gene-CCO46_RS00710;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=CCO46_RS00710;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 119885 120436 . + . ID=gene-CCO46_RS00715;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=CCO46_RS00715;old_locus_tag=CCO46_00715 NZ_NPOH01000001.1 Protein Homology CDS 119885 120436 . + 0 ID=cds-WP_000218080.1;Parent=gene-CCO46_RS00715;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=CCO46_RS00715;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 120583 121383 . + . ID=gene-CCO46_RS00720;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=CCO46_RS00720;old_locus_tag=CCO46_00720 NZ_NPOH01000001.1 Protein Homology CDS 120583 121383 . + 0 ID=cds-WP_000761634.1;Parent=gene-CCO46_RS00720;Dbxref=GenBank:WP_000761634.1;Name=WP_000761634.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=CCO46_RS00720;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761634.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 121537 122523 . + . ID=gene-CCO46_RS00725;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=CCO46_RS00725;old_locus_tag=CCO46_00725 NZ_NPOH01000001.1 Protein Homology CDS 121537 122523 . + 0 ID=cds-WP_001128188.1;Parent=gene-CCO46_RS00725;Dbxref=GenBank:WP_001128188.1;Name=WP_001128188.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=CCO46_RS00725;product=D-cysteine desulfhydrase;protein_id=WP_001128188.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 122544 123212 . + . ID=gene-CCO46_RS00730;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=CCO46_RS00730;old_locus_tag=CCO46_00730 NZ_NPOH01000001.1 Protein Homology CDS 122544 123212 . + 0 ID=cds-WP_001158238.1;Parent=gene-CCO46_RS00730;Dbxref=GenBank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=CCO46_RS00730;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 123209 123961 . + . ID=gene-CCO46_RS00735;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=CCO46_RS00735;old_locus_tag=CCO46_00735 NZ_NPOH01000001.1 Protein Homology CDS 123209 123961 . + 0 ID=cds-WP_001273025.1;Parent=gene-CCO46_RS00735;Dbxref=GenBank:WP_001273025.1;Name=WP_001273025.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=CCO46_RS00735;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273025.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 124193 124915 . + . ID=gene-CCO46_RS00740;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=CCO46_RS00740;old_locus_tag=CCO46_00740 NZ_NPOH01000001.1 Protein Homology CDS 124193 124915 . + 0 ID=cds-WP_023202351.1;Parent=gene-CCO46_RS00740;Dbxref=GenBank:WP_023202351.1;Name=WP_023202351.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=CCO46_RS00740;product=transcriptional regulator SdiA;protein_id=WP_023202351.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 124982 125206 . - . ID=gene-CCO46_RS00745;Name=CCO46_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00745;old_locus_tag=CCO46_00745 NZ_NPOH01000001.1 Protein Homology CDS 124982 125206 . - 0 ID=cds-WP_000106483.1;Parent=gene-CCO46_RS00745;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=CCO46_RS00745;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 125203 125358 . - . ID=gene-CCO46_RS00750;Name=CCO46_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00750;old_locus_tag=CCO46_00750 NZ_NPOH01000001.1 Protein Homology CDS 125203 125358 . - 0 ID=cds-WP_058331789.1;Parent=gene-CCO46_RS00750;Dbxref=GenBank:WP_058331789.1;Name=WP_058331789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=CCO46_RS00750;product=hypothetical protein;protein_id=WP_058331789.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 125670 126326 . + . ID=gene-CCO46_RS00755;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=CCO46_RS00755;old_locus_tag=CCO46_00755 NZ_NPOH01000001.1 Protein Homology CDS 125670 126326 . + 0 ID=cds-WP_000611323.1;Parent=gene-CCO46_RS00755;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=CCO46_RS00755;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 126323 128155 . + . ID=gene-CCO46_RS00760;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CCO46_RS00760;old_locus_tag=CCO46_00760 NZ_NPOH01000001.1 Protein Homology CDS 126323 128155 . + 0 ID=cds-WP_001289472.1;Parent=gene-CCO46_RS00760;Dbxref=GenBank:WP_001289472.1;Name=WP_001289472.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=CCO46_RS00760;product=excinuclease ABC subunit UvrC;protein_id=WP_001289472.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 128212 128760 . + . ID=gene-CCO46_RS00765;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CCO46_RS00765;old_locus_tag=CCO46_00765 NZ_NPOH01000001.1 Protein Homology CDS 128212 128760 . + 0 ID=cds-WP_001160192.1;Parent=gene-CCO46_RS00765;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=CCO46_RS00765;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 128912 128987 . + . ID=gene-CCO46_RS00770;Name=CCO46_RS00770;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS00770;old_locus_tag=CCO46_00770 NZ_NPOH01000001.1 tRNAscan-SE tRNA 128912 128987 . + . ID=rna-CCO46_RS00770;Parent=gene-CCO46_RS00770;anticodon=(pos:128945..128947);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00770;product=tRNA-Gly NZ_NPOH01000001.1 tRNAscan-SE exon 128912 128987 . + . ID=exon-CCO46_RS00770-1;Parent=rna-CCO46_RS00770;anticodon=(pos:128945..128947);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00770;product=tRNA-Gly NZ_NPOH01000001.1 RefSeq gene 129041 129114 . + . ID=gene-CCO46_RS00775;Name=CCO46_RS00775;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS00775;old_locus_tag=CCO46_00775 NZ_NPOH01000001.1 tRNAscan-SE tRNA 129041 129114 . + . ID=rna-CCO46_RS00775;Parent=gene-CCO46_RS00775;anticodon=(pos:129073..129075);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00775;product=tRNA-Cys NZ_NPOH01000001.1 tRNAscan-SE exon 129041 129114 . + . ID=exon-CCO46_RS00775-1;Parent=rna-CCO46_RS00775;anticodon=(pos:129073..129075);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00775;product=tRNA-Cys NZ_NPOH01000001.1 RefSeq gene 129126 129212 . + . ID=gene-CCO46_RS00780;Name=CCO46_RS00780;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS00780;old_locus_tag=CCO46_00780 NZ_NPOH01000001.1 tRNAscan-SE tRNA 129126 129212 . + . ID=rna-CCO46_RS00780;Parent=gene-CCO46_RS00780;anticodon=(pos:129160..129162);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00780;product=tRNA-Leu NZ_NPOH01000001.1 tRNAscan-SE exon 129126 129212 . + . ID=exon-CCO46_RS00780-1;Parent=rna-CCO46_RS00780;anticodon=(pos:129160..129162);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS00780;product=tRNA-Leu NZ_NPOH01000001.1 RefSeq gene 129462 129794 . + . ID=gene-CCO46_RS00785;Name=CCO46_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00785;old_locus_tag=CCO46_00785 NZ_NPOH01000001.1 Protein Homology CDS 129462 129794 . + 0 ID=cds-WP_001556026.1;Parent=gene-CCO46_RS00785;Dbxref=GenBank:WP_001556026.1;Name=WP_001556026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=CCO46_RS00785;product=hypothetical protein;protein_id=WP_001556026.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 130008 131447 . + . ID=gene-CCO46_RS00790;Name=CCO46_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00790;old_locus_tag=CCO46_00790 NZ_NPOH01000001.1 Protein Homology CDS 130008 131447 . + 0 ID=cds-WP_094964394.1;Parent=gene-CCO46_RS00790;Dbxref=GenBank:WP_094964394.1;Name=WP_094964394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=CCO46_RS00790;product=SH3 domain-containing C40 family peptidase;protein_id=WP_094964394.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 131660 131986 . + . ID=gene-CCO46_RS00795;Name=CCO46_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00795;old_locus_tag=CCO46_00795 NZ_NPOH01000001.1 Protein Homology CDS 131660 131986 . + 0 ID=cds-WP_000240837.1;Parent=gene-CCO46_RS00795;Dbxref=GenBank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=CCO46_RS00795;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 132225 132890 . + . ID=gene-CCO46_RS00800;Name=CCO46_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00800;old_locus_tag=CCO46_00800 NZ_NPOH01000001.1 Protein Homology CDS 132225 132890 . + 0 ID=cds-WP_058331787.1;Parent=gene-CCO46_RS00800;Dbxref=GenBank:WP_058331787.1;Name=WP_058331787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=CCO46_RS00800;product=YecA family protein;protein_id=WP_058331787.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 132965 134176 . - . ID=gene-CCO46_RS00805;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=CCO46_RS00805;old_locus_tag=CCO46_00805 NZ_NPOH01000001.1 Protein Homology CDS 132965 134176 . - 0 ID=cds-WP_001747700.1;Parent=gene-CCO46_RS00805;Dbxref=GenBank:WP_001747700.1;Name=WP_001747700.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=CCO46_RS00805;product=tyrosine transporter TyrP;protein_id=WP_001747700.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 134403 134642 . + . ID=gene-CCO46_RS00810;Name=CCO46_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00810;old_locus_tag=CCO46_00810 NZ_NPOH01000001.1 Protein Homology CDS 134403 134642 . + 0 ID=cds-WP_000377238.1;Parent=gene-CCO46_RS00810;Dbxref=GenBank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=CCO46_RS00810;product=YecH family metal-binding protein;protein_id=WP_000377238.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 134688 135185 . - . ID=gene-CCO46_RS00815;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=CCO46_RS00815;old_locus_tag=CCO46_00815 NZ_NPOH01000001.1 Protein Homology CDS 134688 135185 . - 0 ID=cds-WP_000920619.1;Parent=gene-CCO46_RS00815;Dbxref=GenBank:WP_000920619.1;Name=WP_000920619.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=CCO46_RS00815;product=non-heme ferritin;protein_id=WP_000920619.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 135425 135760 . - . ID=gene-CCO46_RS00820;Name=CCO46_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00820;old_locus_tag=CCO46_00820 NZ_NPOH01000001.1 Protein Homology CDS 135425 135760 . - 0 ID=cds-WP_000803229.1;Parent=gene-CCO46_RS00820;Dbxref=GenBank:WP_000803229.1;Name=WP_000803229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=CCO46_RS00820;product=YecR-like lipofamily protein;protein_id=WP_000803229.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 136016 136654 . + . ID=gene-CCO46_RS00825;Name=CCO46_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00825;old_locus_tag=CCO46_00825 NZ_NPOH01000001.1 Protein Homology CDS 136016 136654 . + 0 ID=cds-WP_023202347.1;Parent=gene-CCO46_RS00825;Dbxref=GenBank:WP_023202347.1;Name=WP_023202347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684811.1;locus_tag=CCO46_RS00825;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_023202347.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 136833 137336 . - . ID=gene-CCO46_RS00830;Name=CCO46_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00830;old_locus_tag=CCO46_00830 NZ_NPOH01000001.1 Protein Homology CDS 136833 137336 . - 0 ID=cds-WP_000741707.1;Parent=gene-CCO46_RS00830;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=CCO46_RS00830;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 137887 138441 . + . ID=gene-CCO46_RS00835;Name=CCO46_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00835;old_locus_tag=CCO46_00835 NZ_NPOH01000001.1 Protein Homology CDS 137887 138441 . + 0 ID=cds-WP_058331786.1;Parent=gene-CCO46_RS00835;Dbxref=GenBank:WP_058331786.1;Name=WP_058331786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=CCO46_RS00835;product=DJ-1/PfpI family protein;protein_id=WP_058331786.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 138556 138738 . + . ID=gene-CCO46_RS00840;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=CCO46_RS00840;old_locus_tag=CCO46_00840;partial=true;pseudo=true;start_range=.,138556 NZ_NPOH01000001.1 Protein Homology CDS 138556 138738 . + 0 ID=cds-CCO46_RS00840;Parent=gene-CCO46_RS00840;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=CCO46_RS00840;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;start_range=.,138556;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 138961 139764 . + . ID=gene-CCO46_RS00845;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=CCO46_RS00845;old_locus_tag=CCO46_00845 NZ_NPOH01000001.1 Protein Homology CDS 138961 139764 . + 0 ID=cds-WP_058331785.1;Parent=gene-CCO46_RS00845;Dbxref=GenBank:WP_058331785.1;Name=WP_058331785.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=CCO46_RS00845;product=trehalose-phosphatase;protein_id=WP_058331785.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 139739 141160 . + . ID=gene-CCO46_RS00850;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=CCO46_RS00850;old_locus_tag=CCO46_00850 NZ_NPOH01000001.1 Protein Homology CDS 139739 141160 . + 0 ID=cds-WP_000089042.1;Parent=gene-CCO46_RS00850;Dbxref=GenBank:WP_000089042.1;Name=WP_000089042.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=CCO46_RS00850;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089042.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 141178 141606 . - . ID=gene-CCO46_RS00855;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=CCO46_RS00855;old_locus_tag=CCO46_00855 NZ_NPOH01000001.1 Protein Homology CDS 141178 141606 . - 0 ID=cds-WP_000122606.1;Parent=gene-CCO46_RS00855;Dbxref=GenBank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=CCO46_RS00855;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 141603 141719 . - . ID=gene-CCO46_RS00860;Name=CCO46_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00860;old_locus_tag=CCO46_00860 NZ_NPOH01000001.1 Protein Homology CDS 141603 141719 . - 0 ID=cds-WP_001617301.1;Parent=gene-CCO46_RS00860;Dbxref=GenBank:WP_001617301.1;Name=WP_001617301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=CCO46_RS00860;product=hypothetical protein;protein_id=WP_001617301.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 142402 142743 . + . ID=gene-CCO46_RS00865;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=CCO46_RS00865;old_locus_tag=CCO46_00865 NZ_NPOH01000001.1 Protein Homology CDS 142402 142743 . + 0 ID=cds-WP_001518146.1;Parent=gene-CCO46_RS00865;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=CCO46_RS00865;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 142740 143324 . + . ID=gene-CCO46_RS00870;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=CCO46_RS00870;old_locus_tag=CCO46_00870 NZ_NPOH01000001.1 Protein Homology CDS 142740 143324 . + 0 ID=cds-WP_000605987.1;Parent=gene-CCO46_RS00870;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=CCO46_RS00870;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 143449 144336 . + . ID=gene-CCO46_RS00875;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=CCO46_RS00875;old_locus_tag=CCO46_00875 NZ_NPOH01000001.1 Protein Homology CDS 143449 144336 . + 0 ID=cds-WP_000906312.1;Parent=gene-CCO46_RS00875;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=CCO46_RS00875;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 144333 145262 . + . ID=gene-CCO46_RS00880;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=CCO46_RS00880;old_locus_tag=CCO46_00880 NZ_NPOH01000001.1 Protein Homology CDS 144333 145262 . + 0 ID=cds-WP_000795653.1;Parent=gene-CCO46_RS00880;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=CCO46_RS00880;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 145267 147282 . + . ID=gene-CCO46_RS00885;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=CCO46_RS00885;old_locus_tag=CCO46_00885 NZ_NPOH01000001.1 Protein Homology CDS 145267 147282 . + 0 ID=cds-WP_000061307.1;Parent=gene-CCO46_RS00885;Dbxref=GenBank:WP_000061307.1;Name=WP_000061307.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=CCO46_RS00885;product=chemotaxis protein CheA;protein_id=WP_000061307.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 147303 147806 . + . ID=gene-CCO46_RS00890;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=CCO46_RS00890;old_locus_tag=CCO46_00890 NZ_NPOH01000001.1 Protein Homology CDS 147303 147806 . + 0 ID=cds-WP_000147295.1;Parent=gene-CCO46_RS00890;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=CCO46_RS00890;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 148043 149704 . + . ID=gene-CCO46_RS00895;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=CCO46_RS00895;old_locus_tag=CCO46_00895 NZ_NPOH01000001.1 Protein Homology CDS 148043 149704 . + 0 ID=cds-WP_000483264.1;Parent=gene-CCO46_RS00895;Dbxref=GenBank:WP_000483264.1;Name=WP_000483264.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=CCO46_RS00895;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483264.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 149858 150724 . + . ID=gene-CCO46_RS00900;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=CCO46_RS00900;old_locus_tag=CCO46_00900 NZ_NPOH01000001.1 Protein Homology CDS 149858 150724 . + 0 ID=cds-WP_000204365.1;Parent=gene-CCO46_RS00900;Dbxref=GenBank:WP_000204365.1;Name=WP_000204365.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=CCO46_RS00900;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204365.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 150721 151770 . + . ID=gene-CCO46_RS00905;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=CCO46_RS00905;old_locus_tag=CCO46_00905 NZ_NPOH01000001.1 Protein Homology CDS 150721 151770 . + 0 ID=cds-WP_000036392.1;Parent=gene-CCO46_RS00905;Dbxref=GenBank:WP_000036392.1;Name=WP_000036392.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=CCO46_RS00905;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036392.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 151788 152177 . + . ID=gene-CCO46_RS00910;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=CCO46_RS00910;old_locus_tag=CCO46_00910 NZ_NPOH01000001.1 Protein Homology CDS 151788 152177 . + 0 ID=cds-WP_000763861.1;Parent=gene-CCO46_RS00910;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=CCO46_RS00910;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 152188 152832 . + . ID=gene-CCO46_RS00915;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=CCO46_RS00915;old_locus_tag=CCO46_00915 NZ_NPOH01000001.1 Protein Homology CDS 152188 152832 . + 0 ID=cds-WP_000983586.1;Parent=gene-CCO46_RS00915;Dbxref=GenBank:WP_000983586.1;Name=WP_000983586.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=CCO46_RS00915;product=protein phosphatase CheZ;protein_id=WP_000983586.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 153026 154177 . + . ID=gene-CCO46_RS00920;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=CCO46_RS00920;old_locus_tag=CCO46_00920 NZ_NPOH01000001.1 Protein Homology CDS 153026 154177 . + 0 ID=cds-WP_000797081.1;Parent=gene-CCO46_RS00920;Dbxref=GenBank:WP_000797081.1;Name=WP_000797081.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=CCO46_RS00920;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797081.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 154170 156248 . + . ID=gene-CCO46_RS00925;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO46_RS00925;old_locus_tag=CCO46_00925 NZ_NPOH01000001.1 Protein Homology CDS 154170 156248 . + 0 ID=cds-WP_097363197.1;Parent=gene-CCO46_RS00925;Dbxref=GenBank:WP_097363197.1;Name=WP_097363197.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=CCO46_RS00925;product=flagellar biosynthesis protein FlhA;protein_id=WP_097363197.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 156248 156640 . + . ID=gene-CCO46_RS00930;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=CCO46_RS00930;old_locus_tag=CCO46_00930 NZ_NPOH01000001.1 Protein Homology CDS 156248 156640 . + 0 ID=cds-WP_001233619.1;Parent=gene-CCO46_RS00930;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=CCO46_RS00930;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 156877 158016 . + . ID=gene-CCO46_RS00935;Name=CCO46_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00935;old_locus_tag=CCO46_00935 NZ_NPOH01000001.1 Protein Homology CDS 156877 158016 . + 0 ID=cds-WP_000989908.1;Parent=gene-CCO46_RS00935;Dbxref=GenBank:WP_000989908.1;Name=WP_000989908.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=CCO46_RS00935;product=glycoside hydrolase family 88/105 protein;protein_id=WP_000989908.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 158070 159941 . - . ID=gene-CCO46_RS00940;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO46_RS00940;old_locus_tag=CCO46_00940 NZ_NPOH01000001.1 Protein Homology CDS 158070 159941 . - 0 ID=cds-WP_058331783.1;Parent=gene-CCO46_RS00940;Dbxref=GenBank:WP_058331783.1;Name=WP_058331783.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=CCO46_RS00940;product=penicillin-binding protein 2;protein_id=WP_058331783.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 160130 161863 . - . ID=gene-CCO46_RS00945;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CCO46_RS00945;old_locus_tag=CCO46_00945 NZ_NPOH01000001.1 Protein Homology CDS 160130 161863 . - 0 ID=cds-WP_001025358.1;Parent=gene-CCO46_RS00945;Dbxref=GenBank:WP_001025358.1;Name=WP_001025358.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=CCO46_RS00945;product=arginine--tRNA ligase;protein_id=WP_001025358.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 162100 162669 . + . ID=gene-CCO46_RS00950;Name=CCO46_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00950;old_locus_tag=CCO46_00950 NZ_NPOH01000001.1 Protein Homology CDS 162100 162669 . + 0 ID=cds-WP_094887631.1;Parent=gene-CCO46_RS00950;Dbxref=GenBank:WP_094887631.1;Name=WP_094887631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=CCO46_RS00950;product=VOC family protein;protein_id=WP_094887631.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 162689 163435 . + . ID=gene-CCO46_RS00955;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=CCO46_RS00955;old_locus_tag=CCO46_00955 NZ_NPOH01000001.1 Protein Homology CDS 162689 163435 . + 0 ID=cds-WP_094887630.1;Parent=gene-CCO46_RS00955;Dbxref=GenBank:WP_094887630.1;Name=WP_094887630.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=CCO46_RS00955;product=copper homeostasis protein CutC;protein_id=WP_094887630.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 163671 164642 . - . ID=gene-CCO46_RS00965;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=CCO46_RS00965;old_locus_tag=CCO46_00965 NZ_NPOH01000001.1 Protein Homology CDS 163671 164642 . - 0 ID=cds-WP_080160496.1;Parent=gene-CCO46_RS00965;Dbxref=GenBank:WP_080160496.1;Name=WP_080160496.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=CCO46_RS00965;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_080160496.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 164639 165382 . - . ID=gene-CCO46_RS00970;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=CCO46_RS00970;old_locus_tag=CCO46_00970 NZ_NPOH01000001.1 Protein Homology CDS 164639 165382 . - 0 ID=cds-WP_000019609.1;Parent=gene-CCO46_RS00970;Dbxref=GenBank:WP_000019609.1;Name=WP_000019609.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=CCO46_RS00970;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019609.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 165423 165818 . - . ID=gene-CCO46_RS00975;Name=CCO46_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00975;old_locus_tag=CCO46_00975 NZ_NPOH01000001.1 Protein Homology CDS 165423 165818 . - 0 ID=cds-WP_000252975.1;Parent=gene-CCO46_RS00975;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=CCO46_RS00975;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 165871 166689 . - . ID=gene-CCO46_RS00980;Name=CCO46_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00980;old_locus_tag=CCO46_00980 NZ_NPOH01000001.1 Protein Homology CDS 165871 166689 . - 0 ID=cds-WP_000639226.1;Parent=gene-CCO46_RS00980;Dbxref=GenBank:WP_000639226.1;Name=WP_000639226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=CCO46_RS00980;product=DUF72 domain-containing protein;protein_id=WP_000639226.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 166686 167252 . - . ID=gene-CCO46_RS00985;Name=CCO46_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS00985;old_locus_tag=CCO46_00985 NZ_NPOH01000001.1 Protein Homology CDS 166686 167252 . - 0 ID=cds-WP_000916144.1;Parent=gene-CCO46_RS00985;Dbxref=GenBank:WP_000916144.1;Name=WP_000916144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=CCO46_RS00985;product=hydrolase;protein_id=WP_000916144.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 167577 169349 . + . ID=gene-CCO46_RS00990;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CCO46_RS00990;old_locus_tag=CCO46_00990 NZ_NPOH01000001.1 Protein Homology CDS 167577 169349 . + 0 ID=cds-WP_097363198.1;Parent=gene-CCO46_RS00990;Dbxref=GenBank:WP_097363198.1;Name=WP_097363198.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=CCO46_RS00990;product=aspartate--tRNA ligase;protein_id=WP_097363198.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 169443 169895 . + . ID=gene-CCO46_RS00995;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=CCO46_RS00995;old_locus_tag=CCO46_00995 NZ_NPOH01000001.1 Protein Homology CDS 169443 169895 . + 0 ID=cds-WP_000653693.1;Parent=gene-CCO46_RS00995;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=CCO46_RS00995;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 169925 170665 . + . ID=gene-CCO46_RS01000;Name=CCO46_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01000;old_locus_tag=CCO46_01000 NZ_NPOH01000001.1 Protein Homology CDS 169925 170665 . + 0 ID=cds-WP_000907242.1;Parent=gene-CCO46_RS01000;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=CCO46_RS01000;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 170702 171223 . + . ID=gene-CCO46_RS01005;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=CCO46_RS01005;old_locus_tag=CCO46_01005 NZ_NPOH01000001.1 Protein Homology CDS 170702 171223 . + 0 ID=cds-WP_000022509.1;Parent=gene-CCO46_RS01005;Dbxref=GenBank:WP_000022509.1;Name=WP_000022509.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=CCO46_RS01005;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022509.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 171225 171824 . - . ID=gene-CCO46_RS01010;Name=CCO46_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01010;old_locus_tag=CCO46_01010 NZ_NPOH01000001.1 Protein Homology CDS 171225 171824 . - 0 ID=cds-WP_000716750.1;Parent=gene-CCO46_RS01010;Dbxref=GenBank:WP_000716750.1;Name=WP_000716750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=CCO46_RS01010;product=YebB family permuted papain-like enzyme;protein_id=WP_000716750.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 172033 172725 . + . ID=gene-CCO46_RS01015;Name=CCO46_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01015;old_locus_tag=CCO46_01015 NZ_NPOH01000001.1 Protein Homology CDS 172033 172725 . + 0 ID=cds-WP_170947408.1;Parent=gene-CCO46_RS01015;Dbxref=GenBank:WP_170947408.1;Name=WP_170947408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=CCO46_RS01015;product=hypothetical protein;protein_id=WP_170947408.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 173085 173696 . + . ID=gene-CCO46_RS01020;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CCO46_RS01020;old_locus_tag=CCO46_01020 NZ_NPOH01000001.1 Protein Homology CDS 173085 173696 . + 0 ID=cds-WP_000580335.1;Parent=gene-CCO46_RS01020;Dbxref=GenBank:WP_000580335.1;Name=WP_000580335.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=CCO46_RS01020;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580335.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 173705 174715 . + . ID=gene-CCO46_RS01025;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CCO46_RS01025;old_locus_tag=CCO46_01025 NZ_NPOH01000001.1 Protein Homology CDS 173705 174715 . + 0 ID=cds-WP_000568508.1;Parent=gene-CCO46_RS01025;Dbxref=GenBank:WP_000568508.1;Name=WP_000568508.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=CCO46_RS01025;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568508.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 174794 175579 . - . ID=gene-CCO46_RS01030;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=CCO46_RS01030;old_locus_tag=CCO46_01030 NZ_NPOH01000001.1 Protein Homology CDS 174794 175579 . - 0 ID=cds-WP_086805756.1;Parent=gene-CCO46_RS01030;Dbxref=GenBank:WP_086805756.1;Name=WP_086805756.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=CCO46_RS01030;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_086805756.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 175576 176331 . - . ID=gene-CCO46_RS01035;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=CCO46_RS01035;old_locus_tag=CCO46_01035 NZ_NPOH01000001.1 Protein Homology CDS 175576 176331 . - 0 ID=cds-WP_097363199.1;Parent=gene-CCO46_RS01035;Dbxref=GenBank:WP_097363199.1;Name=WP_097363199.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=CCO46_RS01035;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_097363199.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 176410 177354 . + . ID=gene-CCO46_RS01040;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=CCO46_RS01040;old_locus_tag=CCO46_01040 NZ_NPOH01000001.1 Protein Homology CDS 176410 177354 . + 0 ID=cds-WP_000939597.1;Parent=gene-CCO46_RS01040;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=CCO46_RS01040;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 177370 178689 . + . ID=gene-CCO46_RS01045;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=CCO46_RS01045;old_locus_tag=CCO46_01045 NZ_NPOH01000001.1 Protein Homology CDS 177370 178689 . + 0 ID=cds-WP_001184028.1;Parent=gene-CCO46_RS01045;Dbxref=GenBank:WP_001184028.1;Name=WP_001184028.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=CCO46_RS01045;product=murein DD-endopeptidase MepM;protein_id=WP_001184028.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 178806 179777 . + . ID=gene-CCO46_RS01055;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=CCO46_RS01055;old_locus_tag=CCO46_01055 NZ_NPOH01000001.1 Protein Homology CDS 178806 179777 . + 0 ID=cds-WP_000448401.1;Parent=gene-CCO46_RS01055;Dbxref=GenBank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=CCO46_RS01055;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 179850 181292 . - . ID=gene-CCO46_RS01060;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CCO46_RS01060;old_locus_tag=CCO46_01060 NZ_NPOH01000001.1 Protein Homology CDS 179850 181292 . - 0 ID=cds-WP_058331780.1;Parent=gene-CCO46_RS01060;Dbxref=GenBank:WP_058331780.1;Name=WP_058331780.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=CCO46_RS01060;product=pyruvate kinase;protein_id=WP_058331780.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 181416 182285 . - . ID=gene-CCO46_RS01065;Name=CCO46_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01065;old_locus_tag=CCO46_01065 NZ_NPOH01000001.1 Protein Homology CDS 181416 182285 . - 0 ID=cds-WP_001056719.1;Parent=gene-CCO46_RS01065;Dbxref=GenBank:WP_001056719.1;Name=WP_001056719.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=CCO46_RS01065;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001056719.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 182627 184102 . + . ID=gene-CCO46_RS01075;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CCO46_RS01075;old_locus_tag=CCO46_01075 NZ_NPOH01000001.1 Protein Homology CDS 182627 184102 . + 0 ID=cds-WP_000301711.1;Parent=gene-CCO46_RS01075;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=CCO46_RS01075;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 184337 186148 . + . ID=gene-CCO46_RS01080;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=CCO46_RS01080;old_locus_tag=CCO46_01080 NZ_NPOH01000001.1 Protein Homology CDS 184337 186148 . + 0 ID=cds-WP_058331779.1;Parent=gene-CCO46_RS01080;Dbxref=GenBank:WP_058331779.1;Name=WP_058331779.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=CCO46_RS01080;product=phosphogluconate dehydratase;protein_id=WP_058331779.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 186186 186827 . + . ID=gene-CCO46_RS01085;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=CCO46_RS01085;old_locus_tag=CCO46_01085 NZ_NPOH01000001.1 Protein Homology CDS 186186 186827 . + 0 ID=cds-WP_000800494.1;Parent=gene-CCO46_RS01085;Dbxref=GenBank:WP_000800494.1;Name=WP_000800494.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=CCO46_RS01085;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800494.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 186927 188105 . - . ID=gene-CCO46_RS01090;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=CCO46_RS01090;old_locus_tag=CCO46_01090 NZ_NPOH01000001.1 Protein Homology CDS 186927 188105 . - 0 ID=cds-WP_001524392.1;Parent=gene-CCO46_RS01090;Dbxref=GenBank:WP_001524392.1;Name=WP_001524392.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=CCO46_RS01090;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_001524392.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 188236 188526 . + . ID=gene-CCO46_RS01095;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=CCO46_RS01095;old_locus_tag=CCO46_01095 NZ_NPOH01000001.1 Protein Homology CDS 188236 188526 . + 0 ID=cds-WP_000257723.1;Parent=gene-CCO46_RS01095;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=CCO46_RS01095;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 188594 188947 . + . ID=gene-CCO46_RS01100;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=CCO46_RS01100;old_locus_tag=CCO46_01100 NZ_NPOH01000001.1 Protein Homology CDS 188594 188947 . + 0 ID=cds-WP_001042123.1;Parent=gene-CCO46_RS01100;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=CCO46_RS01100;product=protein YebF;protein_id=WP_001042123.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 189041 189700 . + . ID=gene-CCO46_RS01105;Name=CCO46_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01105;old_locus_tag=CCO46_01105 NZ_NPOH01000001.1 Protein Homology CDS 189041 189700 . + 0 ID=cds-WP_000024706.1;Parent=gene-CCO46_RS01105;Dbxref=GenBank:WP_000024706.1;Name=WP_000024706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=CCO46_RS01105;product=tellurite resistance TerB family protein;protein_id=WP_000024706.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 189913 191964 . + . ID=gene-CCO46_RS01110;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=CCO46_RS01110;old_locus_tag=CCO46_01110 NZ_NPOH01000001.1 Protein Homology CDS 189913 191964 . + 0 ID=cds-WP_000936999.1;Parent=gene-CCO46_RS01110;Dbxref=GenBank:WP_000936999.1;Name=WP_000936999.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=CCO46_RS01110;product=oligopeptidase B;protein_id=WP_000936999.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 191999 192697 . - . ID=gene-CCO46_RS01115;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=CCO46_RS01115;old_locus_tag=CCO46_01115 NZ_NPOH01000001.1 Protein Homology CDS 191999 192697 . - 0 ID=cds-WP_058331778.1;Parent=gene-CCO46_RS01115;Dbxref=GenBank:WP_058331778.1;Name=WP_058331778.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=CCO46_RS01115;product=exodeoxyribonuclease X;protein_id=WP_058331778.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 192721 193377 . - . ID=gene-CCO46_RS01120;Name=CCO46_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01120;old_locus_tag=CCO46_01120 NZ_NPOH01000001.1 Protein Homology CDS 192721 193377 . - 0 ID=cds-WP_000100256.1;Parent=gene-CCO46_RS01120;Dbxref=GenBank:WP_000100256.1;Name=WP_000100256.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=CCO46_RS01120;product=nitrilase-related carbon-nitrogen hydrolase;protein_id=WP_000100256.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 193485 193715 . - . ID=gene-CCO46_RS01125;Name=CCO46_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01125;old_locus_tag=CCO46_01125 NZ_NPOH01000001.1 Protein Homology CDS 193485 193715 . - 0 ID=cds-WP_000856224.1;Parent=gene-CCO46_RS01125;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=CCO46_RS01125;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 193853 194227 . + . ID=gene-CCO46_RS01130;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=CCO46_RS01130;old_locus_tag=CCO46_01130 NZ_NPOH01000001.1 Protein Homology CDS 193853 194227 . + 0 ID=cds-WP_058331777.1;Parent=gene-CCO46_RS01130;Dbxref=GenBank:WP_058331777.1;Name=WP_058331777.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=CCO46_RS01130;product=CopC domain-containing protein YobA;protein_id=WP_058331777.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 194228 195103 . + . ID=gene-CCO46_RS01135;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=CCO46_RS01135;old_locus_tag=CCO46_01135 NZ_NPOH01000001.1 Protein Homology CDS 194228 195103 . + 0 ID=cds-WP_000979699.1;Parent=gene-CCO46_RS01135;Dbxref=GenBank:WP_000979699.1;Name=WP_000979699.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=CCO46_RS01135;product=copper homeostasis membrane protein CopD;protein_id=WP_000979699.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 195120 195473 . + . ID=gene-CCO46_RS01140;Name=CCO46_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01140;old_locus_tag=CCO46_01140 NZ_NPOH01000001.1 Protein Homology CDS 195120 195473 . + 0 ID=cds-WP_017441954.1;Parent=gene-CCO46_RS01140;Dbxref=GenBank:WP_017441954.1;Name=WP_017441954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=CCO46_RS01140;product=YebY family protein;protein_id=WP_017441954.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 195857 196099 . - . ID=gene-CCO46_RS01150;Name=CCO46_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01150;old_locus_tag=CCO46_01150 NZ_NPOH01000001.1 Protein Homology CDS 195857 196099 . - 0 ID=cds-WP_058331776.1;Parent=gene-CCO46_RS01150;Dbxref=GenBank:WP_058331776.1;Name=WP_058331776.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=CCO46_RS01150;product=tyrosine-type recombinase/integrase;protein_id=WP_058331776.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 196162 197376 . - . ID=gene-CCO46_RS01155;Name=CCO46_RS01155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS01155;old_locus_tag=CCO46_01155;pseudo=true NZ_NPOH01000001.1 Protein Homology CDS 196162 197376 . - 0 ID=cds-CCO46_RS01155;Parent=gene-CCO46_RS01155;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612254.1;locus_tag=CCO46_RS01155;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 197413 197771 . - . ID=gene-CCO46_RS01160;Name=CCO46_RS01160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS01160;old_locus_tag=CCO46_01160;partial=true;pseudo=true;start_range=.,197413 NZ_NPOH01000001.1 Protein Homology CDS 197413 197771 . - 0 ID=cds-CCO46_RS01160;Parent=gene-CCO46_RS01160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611788.1;locus_tag=CCO46_RS01160;partial=true;product=IS4/IS5 family transposase;pseudo=true;start_range=.,197413;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 197999 199322 . + . ID=gene-CCO46_RS01170;Name=CCO46_RS01170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS01170;old_locus_tag=CCO46_01170;pseudo=true NZ_NPOH01000001.1 Protein Homology CDS 197999 199322 . + 0 ID=cds-CCO46_RS01170;Parent=gene-CCO46_RS01170;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012767987.1;locus_tag=CCO46_RS01170;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 199686 200369 . + . ID=gene-CCO46_RS01175;Name=CCO46_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01175;old_locus_tag=CCO46_01175 NZ_NPOH01000001.1 Protein Homology CDS 199686 200369 . + 0 ID=cds-WP_058331774.1;Parent=gene-CCO46_RS01175;Dbxref=GenBank:WP_058331774.1;Name=WP_058331774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=CCO46_RS01175;product=PipA/GogA/GtgA family type III secretion system effector;protein_id=WP_058331774.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 200508 201723 . + . ID=gene-CCO46_RS01180;Name=CCO46_RS01180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS01180;old_locus_tag=CCO46_01180;pseudo=true NZ_NPOH01000001.1 Protein Homology CDS 200508 201723 . + 0 ID=cds-CCO46_RS01180;Parent=gene-CCO46_RS01180;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001111520.1;locus_tag=CCO46_RS01180;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 202161 202637 . - . ID=gene-CCO46_RS01190;Name=CCO46_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01190;old_locus_tag=CCO46_01190 NZ_NPOH01000001.1 Protein Homology CDS 202161 202637 . - 0 ID=cds-WP_024798204.1;Parent=gene-CCO46_RS01190;Dbxref=GenBank:WP_024798204.1;Name=WP_024798204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=CCO46_RS01190;product=hypothetical protein;protein_id=WP_024798204.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 202966 203361 . - . ID=gene-CCO46_RS01195;Name=CCO46_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01195;old_locus_tag=CCO46_01195 NZ_NPOH01000001.1 Protein Homology CDS 202966 203361 . - 0 ID=cds-WP_000422887.1;Parent=gene-CCO46_RS01195;Dbxref=GenBank:WP_000422887.1;Name=WP_000422887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=CCO46_RS01195;product=DUF1398 domain-containing protein;protein_id=WP_000422887.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 204045 204767 . + . ID=gene-CCO46_RS01200;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=CCO46_RS01200;old_locus_tag=CCO46_01200 NZ_NPOH01000001.1 Protein Homology CDS 204045 204767 . + 0 ID=cds-WP_080160452.1;Parent=gene-CCO46_RS01200;Dbxref=GenBank:WP_080160452.1;Name=WP_080160452.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=CCO46_RS01200;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_080160452.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 205052 205216 . + . ID=gene-CCO46_RS01205;Name=CCO46_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01205;old_locus_tag=CCO46_01205 NZ_NPOH01000001.1 Protein Homology CDS 205052 205216 . + 0 ID=cds-WP_001134857.1;Parent=gene-CCO46_RS01205;Dbxref=GenBank:WP_001134857.1;Name=WP_001134857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=CCO46_RS01205;product=hypothetical protein;protein_id=WP_001134857.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 205439 206089 . + . ID=gene-CCO46_RS01210;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=CCO46_RS01210;old_locus_tag=CCO46_01210 NZ_NPOH01000001.1 Protein Homology CDS 205439 206089 . + 0 ID=cds-WP_000986176.1;Parent=gene-CCO46_RS01210;Dbxref=GenBank:WP_000986176.1;Name=WP_000986176.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=CCO46_RS01210;product=protein-serine/threonine phosphatase;protein_id=WP_000986176.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 206108 206299 . - . ID=gene-CCO46_RS01215;Name=CCO46_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01215;old_locus_tag=CCO46_01215 NZ_NPOH01000001.1 Protein Homology CDS 206108 206299 . - 0 ID=cds-WP_000457838.1;Parent=gene-CCO46_RS01215;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=CCO46_RS01215;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 206410 206646 . - . ID=gene-CCO46_RS01220;Name=CCO46_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01220;old_locus_tag=CCO46_01220 NZ_NPOH01000001.1 Protein Homology CDS 206410 206646 . - 0 ID=cds-WP_024131167.1;Parent=gene-CCO46_RS01220;Dbxref=GenBank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=CCO46_RS01220;product=YebV family protein;protein_id=WP_024131167.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 206764 208203 . - . ID=gene-CCO46_RS01225;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=CCO46_RS01225;old_locus_tag=CCO46_01225 NZ_NPOH01000001.1 Protein Homology CDS 206764 208203 . - 0 ID=cds-WP_080160453.1;Parent=gene-CCO46_RS01225;Dbxref=GenBank:WP_080160453.1;Name=WP_080160453.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=CCO46_RS01225;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_080160453.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 208281 210914 . - . ID=gene-CCO46_RS01230;Name=CCO46_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01230;old_locus_tag=CCO46_01230 NZ_NPOH01000001.1 Protein Homology CDS 208281 210914 . - 0 ID=cds-WP_001529852.1;Parent=gene-CCO46_RS01230;Dbxref=GenBank:WP_001529852.1;Name=WP_001529852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=CCO46_RS01230;product=PqiB family protein;protein_id=WP_001529852.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 210883 212166 . - . ID=gene-CCO46_RS01235;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=CCO46_RS01235;old_locus_tag=CCO46_01235 NZ_NPOH01000001.1 Protein Homology CDS 210883 212166 . - 0 ID=cds-WP_001207293.1;Parent=gene-CCO46_RS01235;Dbxref=GenBank:WP_001207293.1;Name=WP_001207293.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=CCO46_RS01235;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207293.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 212295 212792 . + . ID=gene-CCO46_RS01240;Name=CCO46_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01240;old_locus_tag=CCO46_01240 NZ_NPOH01000001.1 Protein Homology CDS 212295 212792 . + 0 ID=cds-WP_001518229.1;Parent=gene-CCO46_RS01240;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=CCO46_RS01240;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 212890 213576 . + . ID=gene-CCO46_RS01245;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=CCO46_RS01245;old_locus_tag=CCO46_01245 NZ_NPOH01000001.1 Protein Homology CDS 212890 213576 . + 0 ID=cds-WP_000431401.1;Parent=gene-CCO46_RS01245;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=CCO46_RS01245;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 213596 215644 . + . ID=gene-CCO46_RS01250;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=CCO46_RS01250;old_locus_tag=CCO46_01250 NZ_NPOH01000001.1 Protein Homology CDS 213596 215644 . + 0 ID=cds-WP_001091237.1;Parent=gene-CCO46_RS01250;Dbxref=GenBank:WP_001091237.1;Name=WP_001091237.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=CCO46_RS01250;product=carboxy terminal-processing peptidase;protein_id=WP_001091237.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 215839 216720 . + . ID=gene-CCO46_RS01255;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=CCO46_RS01255;old_locus_tag=CCO46_01255 NZ_NPOH01000001.1 Protein Homology CDS 215839 216720 . + 0 ID=cds-WP_000984498.1;Parent=gene-CCO46_RS01255;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=CCO46_RS01255;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 216768 218141 . - . ID=gene-CCO46_RS01260;Name=CCO46_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01260;old_locus_tag=CCO46_01260 NZ_NPOH01000001.1 Protein Homology CDS 216768 218141 . - 0 ID=cds-WP_000416139.1;Parent=gene-CCO46_RS01260;Dbxref=GenBank:WP_000416139.1;Name=WP_000416139.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=CCO46_RS01260;product=MFS transporter;protein_id=WP_000416139.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 218317 219108 . + . ID=gene-CCO46_RS01265;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=CCO46_RS01265;old_locus_tag=CCO46_01265 NZ_NPOH01000001.1 Protein Homology CDS 218317 219108 . + 0 ID=cds-WP_001262195.1;Parent=gene-CCO46_RS01265;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=CCO46_RS01265;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 219320 219559 . - . ID=gene-CCO46_RS01270;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=CCO46_RS01270;old_locus_tag=CCO46_01270 NZ_NPOH01000001.1 Protein Homology CDS 219320 219559 . - 0 ID=cds-WP_001236777.1;Parent=gene-CCO46_RS01270;Dbxref=GenBank:WP_001236777.1;Name=WP_001236777.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=CCO46_RS01270;product=invasion protein YobH;protein_id=WP_001236777.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 219717 219860 . + . ID=gene-CCO46_RS01275;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=CCO46_RS01275;old_locus_tag=CCO46_01275 NZ_NPOH01000001.1 Protein Homology CDS 219717 219860 . + 0 ID=cds-WP_000714547.1;Parent=gene-CCO46_RS01275;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=CCO46_RS01275;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 219931 220218 . + . ID=gene-CCO46_RS01280;Name=CCO46_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01280;old_locus_tag=CCO46_01280 NZ_NPOH01000001.1 Protein Homology CDS 219931 220218 . + 0 ID=cds-WP_001000660.1;Parent=gene-CCO46_RS01280;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=CCO46_RS01280;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 220867 221010 . + . ID=gene-CCO46_RS01285;Name=CCO46_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01285;old_locus_tag=CCO46_01285 NZ_NPOH01000001.1 Protein Homology CDS 220867 221010 . + 0 ID=cds-WP_001537930.1;Parent=gene-CCO46_RS01285;Dbxref=GenBank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=CCO46_RS01285;product=DUF2627 domain-containing protein;protein_id=WP_001537930.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 221023 221232 . + . ID=gene-CCO46_RS01290;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO46_RS01290;old_locus_tag=CCO46_01290 NZ_NPOH01000001.1 Protein Homology CDS 221023 221232 . + 0 ID=cds-WP_001062678.1;Parent=gene-CCO46_RS01290;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=CCO46_RS01290;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 221452 223197 . + . ID=gene-CCO46_RS01295;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO46_RS01295;old_locus_tag=CCO46_01295 NZ_NPOH01000001.1 Protein Homology CDS 221452 223197 . + 0 ID=cds-WP_000730322.1;Parent=gene-CCO46_RS01295;Dbxref=GenBank:WP_000730322.1;Name=WP_000730322.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=CCO46_RS01295;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730322.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 223263 224072 . + . ID=gene-CCO46_RS01300;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=CCO46_RS01300;old_locus_tag=CCO46_01300 NZ_NPOH01000001.1 Protein Homology CDS 223263 224072 . + 0 ID=cds-WP_000010924.1;Parent=gene-CCO46_RS01300;Dbxref=GenBank:WP_000010924.1;Name=WP_000010924.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=CCO46_RS01300;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010924.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 224069 224635 . - . ID=gene-CCO46_RS01305;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=CCO46_RS01305;old_locus_tag=CCO46_01305 NZ_NPOH01000001.1 Protein Homology CDS 224069 224635 . - 0 ID=cds-WP_001518359.1;Parent=gene-CCO46_RS01305;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=CCO46_RS01305;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11 NZ_NPOH01000001.1 cmsearch riboswitch 224747 224848 . - . ID=id-NZ_NPOH01000001.1:224747..224848;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPOH01000001.1 RefSeq gene 225045 225503 . - . ID=gene-CCO46_RS01315;Name=CCO46_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01315;old_locus_tag=CCO46_01315 NZ_NPOH01000001.1 Protein Homology CDS 225045 225503 . - 0 ID=cds-WP_000156280.1;Parent=gene-CCO46_RS01315;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=CCO46_RS01315;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 225562 226413 . - . ID=gene-CCO46_RS01320;Name=CCO46_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01320;old_locus_tag=CCO46_01320 NZ_NPOH01000001.1 Protein Homology CDS 225562 226413 . - 0 ID=cds-WP_001518647.1;Parent=gene-CCO46_RS01320;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=CCO46_RS01320;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 226426 227226 . - . ID=gene-CCO46_RS01325;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=CCO46_RS01325;old_locus_tag=CCO46_01325 NZ_NPOH01000001.1 Protein Homology CDS 226426 227226 . - 0 ID=cds-WP_000406918.1;Parent=gene-CCO46_RS01325;Dbxref=GenBank:WP_000406918.1;Name=WP_000406918.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=CCO46_RS01325;product=PTS mannose transporter subunit IIC;protein_id=WP_000406918.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 227279 228247 . - . ID=gene-CCO46_RS01330;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=CCO46_RS01330;old_locus_tag=CCO46_01330 NZ_NPOH01000001.1 Protein Homology CDS 227279 228247 . - 0 ID=cds-WP_000150523.1;Parent=gene-CCO46_RS01330;Dbxref=GenBank:WP_000150523.1;Name=WP_000150523.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=CCO46_RS01330;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150523.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 228565 228732 . + . ID=gene-CCO46_RS25775;Name=CCO46_RS25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25775 NZ_NPOH01000001.1 Protein Homology CDS 228565 228732 . + 0 ID=cds-WP_370739650.1;Parent=gene-CCO46_RS25775;Dbxref=GenBank:WP_370739650.1;Name=WP_370739650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=CCO46_RS25775;product=protein YoaL;protein_id=WP_370739650.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 228720 230279 . + . ID=gene-CCO46_RS01340;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=CCO46_RS01340;old_locus_tag=CCO46_01340 NZ_NPOH01000001.1 Protein Homology CDS 228720 230279 . + 0 ID=cds-WP_000421815.1;Parent=gene-CCO46_RS01340;Dbxref=GenBank:WP_000421815.1;Name=WP_000421815.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=CCO46_RS01340;product=CNNM family cation transport protein YoaE;protein_id=WP_000421815.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 230301 231902 . - . ID=gene-CCO46_RS01345;Name=CCO46_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01345;old_locus_tag=CCO46_01345 NZ_NPOH01000001.1 Protein Homology CDS 230301 231902 . - 0 ID=cds-WP_097363200.1;Parent=gene-CCO46_RS01345;Dbxref=GenBank:WP_097363200.1;Name=WP_097363200.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=CCO46_RS01345;product=EAL domain-containing protein;protein_id=WP_097363200.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 232040 233404 . - . ID=gene-CCO46_RS01350;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=CCO46_RS01350;old_locus_tag=CCO46_01350 NZ_NPOH01000001.1 Protein Homology CDS 232040 233404 . - 0 ID=cds-WP_097363201.1;Parent=gene-CCO46_RS01350;Dbxref=GenBank:WP_097363201.1;Name=WP_097363201.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=CCO46_RS01350;product=L-serine ammonia-lyase;protein_id=WP_097363201.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 233668 234246 . - . ID=gene-CCO46_RS01355;Name=CCO46_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01355;old_locus_tag=CCO46_01355 NZ_NPOH01000001.1 Protein Homology CDS 233668 234246 . - 0 ID=cds-WP_097363202.1;Parent=gene-CCO46_RS01355;Dbxref=GenBank:WP_097363202.1;Name=WP_097363202.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=CCO46_RS01355;product=CoA pyrophosphatase;protein_id=WP_097363202.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 234250 235614 . - . ID=gene-CCO46_RS01360;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=CCO46_RS01360;old_locus_tag=CCO46_01360 NZ_NPOH01000001.1 Protein Homology CDS 234250 235614 . - 0 ID=cds-WP_097363203.1;Parent=gene-CCO46_RS01360;Dbxref=GenBank:WP_097363203.1;Name=WP_097363203.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=CCO46_RS01360;product=aminodeoxychorismate synthase component 1;protein_id=WP_097363203.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 235695 235874 . + . ID=gene-CCO46_RS01365;Name=CCO46_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01365;old_locus_tag=CCO46_01365 NZ_NPOH01000001.1 Protein Homology CDS 235695 235874 . + 0 ID=cds-WP_000457328.1;Parent=gene-CCO46_RS01365;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=CCO46_RS01365;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 235880 236224 . - . ID=gene-CCO46_RS01370;Name=CCO46_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01370;old_locus_tag=CCO46_01370 NZ_NPOH01000001.1 Protein Homology CDS 235880 236224 . - 0 ID=cds-WP_000029550.1;Parent=gene-CCO46_RS01370;Dbxref=GenBank:WP_000029550.1;Name=WP_000029550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=CCO46_RS01370;product=RidA family protein;protein_id=WP_000029550.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 236355 238265 . + . ID=gene-CCO46_RS01375;Name=CCO46_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01375;old_locus_tag=CCO46_01375 NZ_NPOH01000001.1 Protein Homology CDS 236355 238265 . + 0 ID=cds-WP_097363204.1;Parent=gene-CCO46_RS01375;Dbxref=GenBank:WP_097363204.1;Name=WP_097363204.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=CCO46_RS01375;product=ATP-dependent DNA helicase;protein_id=WP_097363204.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 238323 239018 . + . ID=gene-CCO46_RS01380;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CCO46_RS01380;old_locus_tag=CCO46_01380 NZ_NPOH01000001.1 Protein Homology CDS 238323 239018 . + 0 ID=cds-WP_061371953.1;Parent=gene-CCO46_RS01380;Dbxref=GenBank:WP_061371953.1;Name=WP_061371953.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=CCO46_RS01380;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_061371953.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 239090 239671 . + . ID=gene-CCO46_RS01385;Name=CCO46_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01385;old_locus_tag=CCO46_01385 NZ_NPOH01000001.1 Protein Homology CDS 239090 239671 . + 0 ID=cds-WP_000290594.1;Parent=gene-CCO46_RS01385;Dbxref=GenBank:WP_000290594.1;Name=WP_000290594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=CCO46_RS01385;product=Slp family lipoprotein;protein_id=WP_000290594.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 239876 241561 . + . ID=gene-CCO46_RS01395;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CCO46_RS01395;old_locus_tag=CCO46_01395 NZ_NPOH01000001.1 Protein Homology CDS 239876 241561 . + 0 ID=cds-WP_001532413.1;Parent=gene-CCO46_RS01395;Dbxref=GenBank:WP_001532413.1;Name=WP_001532413.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=CCO46_RS01395;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_001532413.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 241634 242761 . + . ID=gene-CCO46_RS01400;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=CCO46_RS01400;old_locus_tag=CCO46_01400 NZ_NPOH01000001.1 Protein Homology CDS 241634 242761 . + 0 ID=cds-WP_024146063.1;Parent=gene-CCO46_RS01400;Dbxref=GenBank:WP_024146063.1;Name=WP_024146063.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=CCO46_RS01400;product=ribonuclease D;protein_id=WP_024146063.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 242883 243149 . - . ID=gene-CCO46_RS01405;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=CCO46_RS01405;old_locus_tag=CCO46_01405 NZ_NPOH01000001.1 Protein Homology CDS 242883 243149 . - 0 ID=cds-WP_001185666.1;Parent=gene-CCO46_RS01405;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=CCO46_RS01405;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 243153 243965 . - . ID=gene-CCO46_RS01410;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=CCO46_RS01410;old_locus_tag=CCO46_01410 NZ_NPOH01000001.1 Protein Homology CDS 243153 243965 . - 0 ID=cds-WP_000101047.1;Parent=gene-CCO46_RS01410;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=CCO46_RS01410;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 243989 244696 . - . ID=gene-CCO46_RS01415;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=CCO46_RS01415;old_locus_tag=CCO46_01415 NZ_NPOH01000001.1 Protein Homology CDS 243989 244696 . - 0 ID=cds-WP_000072527.1;Parent=gene-CCO46_RS01415;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=CCO46_RS01415;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 244822 245115 . + . ID=gene-CCO46_RS01420;Name=CCO46_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01420;old_locus_tag=CCO46_01420 NZ_NPOH01000001.1 Protein Homology CDS 244822 245115 . + 0 ID=cds-WP_001525604.1;Parent=gene-CCO46_RS01420;Dbxref=GenBank:WP_001525604.1;Name=WP_001525604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=CCO46_RS01420;product=YcgL domain-containing protein;protein_id=WP_001525604.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 245165 245824 . + . ID=gene-CCO46_RS01425;Name=CCO46_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01425;old_locus_tag=CCO46_01425 NZ_NPOH01000001.1 Protein Homology CDS 245165 245824 . + 0 ID=cds-WP_001537367.1;Parent=gene-CCO46_RS01425;Dbxref=GenBank:WP_001537367.1;Name=WP_001537367.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=CCO46_RS01425;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001537367.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 245917 246363 . + . ID=gene-CCO46_RS01430;Name=CCO46_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01430;old_locus_tag=CCO46_01430 NZ_NPOH01000001.1 Protein Homology CDS 245917 246363 . + 0 ID=cds-WP_001285703.1;Parent=gene-CCO46_RS01430;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=CCO46_RS01430;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 246715 246852 . + . ID=gene-CCO46_RS01435;Name=CCO46_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01435;old_locus_tag=CCO46_01435 NZ_NPOH01000001.1 Protein Homology CDS 246715 246852 . + 0 ID=cds-WP_001540194.1;Parent=gene-CCO46_RS01435;Dbxref=GenBank:WP_001540194.1;Name=WP_001540194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=CCO46_RS01435;product=hypothetical protein;protein_id=WP_001540194.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 247044 247217 . + . ID=gene-CCO46_RS01440;Name=CCO46_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01440;old_locus_tag=CCO46_01440 NZ_NPOH01000001.1 Protein Homology CDS 247044 247217 . + 0 ID=cds-WP_001083583.1;Parent=gene-CCO46_RS01440;Dbxref=GenBank:WP_001083583.1;Name=WP_001083583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=CCO46_RS01440;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083583.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 247289 247630 . - . ID=gene-CCO46_RS01445;Name=CCO46_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01445;old_locus_tag=CCO46_01445 NZ_NPOH01000001.1 Protein Homology CDS 247289 247630 . - 0 ID=cds-WP_000018967.1;Parent=gene-CCO46_RS01445;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=CCO46_RS01445;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 247740 248270 . - . ID=gene-CCO46_RS01450;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=CCO46_RS01450;old_locus_tag=CCO46_01450 NZ_NPOH01000001.1 Protein Homology CDS 247740 248270 . - 0 ID=cds-WP_000943475.1;Parent=gene-CCO46_RS01450;Dbxref=GenBank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=CCO46_RS01450;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 248412 249956 . - . ID=gene-CCO46_RS01455;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=CCO46_RS01455;old_locus_tag=CCO46_01455 NZ_NPOH01000001.1 Protein Homology CDS 248412 249956 . - 0 ID=cds-WP_000406438.1;Parent=gene-CCO46_RS01455;Dbxref=GenBank:WP_000406438.1;Name=WP_000406438.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=CCO46_RS01455;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406438.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 250176 250895 . + . ID=gene-CCO46_RS01460;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=CCO46_RS01460;old_locus_tag=CCO46_01460 NZ_NPOH01000001.1 Protein Homology CDS 250176 250895 . + 0 ID=cds-WP_000234826.1;Parent=gene-CCO46_RS01460;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=CCO46_RS01460;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 250942 252474 . - . ID=gene-CCO46_RS01465;Name=CCO46_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01465;old_locus_tag=CCO46_01465 NZ_NPOH01000001.1 Protein Homology CDS 250942 252474 . - 0 ID=cds-WP_000190832.1;Parent=gene-CCO46_RS01465;Dbxref=GenBank:WP_000190832.1;Name=WP_000190832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=CCO46_RS01465;product=SpoVR family protein;protein_id=WP_000190832.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 252797 254095 . + . ID=gene-CCO46_RS01470;Name=CCO46_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01470;old_locus_tag=CCO46_01470 NZ_NPOH01000001.1 Protein Homology CDS 252797 254095 . + 0 ID=cds-WP_001266938.1;Parent=gene-CCO46_RS01470;Dbxref=GenBank:WP_001266938.1;Name=WP_001266938.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=CCO46_RS01470;product=D-amino acid dehydrogenase;protein_id=WP_001266938.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 254109 255179 . + . ID=gene-CCO46_RS01475;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=CCO46_RS01475;old_locus_tag=CCO46_01475 NZ_NPOH01000001.1 Protein Homology CDS 254109 255179 . + 0 ID=cds-WP_000197903.1;Parent=gene-CCO46_RS01475;Dbxref=GenBank:WP_000197903.1;Name=WP_000197903.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=CCO46_RS01475;product=catabolic alanine racemase DadX;protein_id=WP_000197903.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 255212 255304 . + . ID=gene-CCO46_RS25780;Name=CCO46_RS25780;end_range=255304,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25780;partial=true;pseudo=true NZ_NPOH01000001.1 Protein Homology CDS 255212 255304 . + 0 ID=cds-CCO46_RS25780;Parent=gene-CCO46_RS25780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=255304,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=CCO46_RS25780;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 255260 256975 . - . ID=gene-CCO46_RS01480;Name=CCO46_RS01480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS01480;old_locus_tag=CCO46_01480;partial=true;pseudo=true;start_range=.,255260 NZ_NPOH01000001.1 Protein Homology CDS 255260 256975 . - 0 ID=cds-CCO46_RS01480;Parent=gene-CCO46_RS01480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=CCO46_RS01480;partial=true;product=potassium/proton antiporter;pseudo=true;start_range=.,255260;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 257072 257986 . - . ID=gene-CCO46_RS01485;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=CCO46_RS01485;old_locus_tag=CCO46_01485 NZ_NPOH01000001.1 Protein Homology CDS 257072 257986 . - 0 ID=cds-WP_061371949.1;Parent=gene-CCO46_RS01485;Dbxref=GenBank:WP_061371949.1;Name=WP_061371949.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=CCO46_RS01485;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_061371949.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 258157 258768 . + . ID=gene-CCO46_RS01490;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=CCO46_RS01490;old_locus_tag=CCO46_01490 NZ_NPOH01000001.1 Protein Homology CDS 258157 258768 . + 0 ID=cds-WP_000776974.1;Parent=gene-CCO46_RS01490;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=CCO46_RS01490;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 258782 259516 . - . ID=gene-CCO46_RS01495;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=CCO46_RS01495;old_locus_tag=CCO46_01495 NZ_NPOH01000001.1 Protein Homology CDS 258782 259516 . - 0 ID=cds-WP_000017423.1;Parent=gene-CCO46_RS01495;Dbxref=GenBank:WP_000017423.1;Name=WP_000017423.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=CCO46_RS01495;product=flagellar brake protein YcgR;protein_id=WP_000017423.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 259685 259939 . + . ID=gene-CCO46_RS01500;Name=CCO46_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01500;old_locus_tag=CCO46_01500 NZ_NPOH01000001.1 Protein Homology CDS 259685 259939 . + 0 ID=cds-WP_000511323.1;Parent=gene-CCO46_RS01500;Dbxref=GenBank:WP_000511323.1;Name=WP_000511323.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=CCO46_RS01500;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511323.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 260002 261714 . - . ID=gene-CCO46_RS01505;Name=CCO46_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01505;old_locus_tag=CCO46_01505 NZ_NPOH01000001.1 Protein Homology CDS 260002 261714 . - 0 ID=cds-WP_000612830.1;Parent=gene-CCO46_RS01505;Dbxref=GenBank:WP_000612830.1;Name=WP_000612830.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=CCO46_RS01505;product=alpha%2Calpha-trehalase;protein_id=WP_000612830.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 261928 263202 . - . ID=gene-CCO46_RS01510;Name=CCO46_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01510;old_locus_tag=CCO46_01510 NZ_NPOH01000001.1 Protein Homology CDS 261928 263202 . - 0 ID=cds-WP_001526439.1;Parent=gene-CCO46_RS01510;Dbxref=GenBank:WP_001526439.1;Name=WP_001526439.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=CCO46_RS01510;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001526439.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 263597 263686 . - . ID=gene-CCO46_RS01515;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=CCO46_RS01515;old_locus_tag=CCO46_01515 NZ_NPOH01000001.1 Protein Homology CDS 263597 263686 . - 0 ID=cds-WP_000270301.1;Parent=gene-CCO46_RS01515;Dbxref=GenBank:WP_000270301.1;Name=WP_000270301.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=CCO46_RS01515;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270301.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 263699 264835 . - . ID=gene-CCO46_RS01520;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=CCO46_RS01520;old_locus_tag=CCO46_01520 NZ_NPOH01000001.1 Protein Homology CDS 263699 264835 . - 0 ID=cds-WP_000888110.1;Parent=gene-CCO46_RS01520;Dbxref=GenBank:WP_000888110.1;Name=WP_000888110.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=CCO46_RS01520;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888110.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 264847 266391 . - . ID=gene-CCO46_RS01525;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=CCO46_RS01525;old_locus_tag=CCO46_01525 NZ_NPOH01000001.1 Protein Homology CDS 264847 266391 . - 0 ID=cds-WP_000263615.1;Parent=gene-CCO46_RS01525;Dbxref=GenBank:WP_000263615.1;Name=WP_000263615.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=CCO46_RS01525;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263615.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 266466 267314 . - . ID=gene-CCO46_RS01530;Name=CCO46_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01530;old_locus_tag=CCO46_01530 NZ_NPOH01000001.1 Protein Homology CDS 266466 267314 . - 0 ID=cds-WP_000063377.1;Parent=gene-CCO46_RS01530;Dbxref=GenBank:WP_000063377.1;Name=WP_000063377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=CCO46_RS01530;product=hydrogenase expression/formation protein;protein_id=WP_000063377.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 267311 267715 . - . ID=gene-CCO46_RS01535;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=CCO46_RS01535;old_locus_tag=CCO46_01535 NZ_NPOH01000001.1 Protein Homology CDS 267311 267715 . - 0 ID=cds-WP_001262580.1;Parent=gene-CCO46_RS01535;Dbxref=GenBank:WP_001262580.1;Name=WP_001262580.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=CCO46_RS01535;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262580.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 267705 268301 . - . ID=gene-CCO46_RS01540;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=CCO46_RS01540;old_locus_tag=CCO46_01540 NZ_NPOH01000001.1 Protein Homology CDS 267705 268301 . - 0 ID=cds-WP_023254289.1;Parent=gene-CCO46_RS01540;Dbxref=GenBank:WP_023254289.1;Name=WP_023254289.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=CCO46_RS01540;product=hydrogenase 1 maturation protease;protein_id=WP_023254289.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 268298 269029 . - . ID=gene-CCO46_RS01545;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=CCO46_RS01545;old_locus_tag=CCO46_01545 NZ_NPOH01000001.1 Protein Homology CDS 268298 269029 . - 0 ID=cds-WP_000147029.1;Parent=gene-CCO46_RS01545;Dbxref=GenBank:WP_000147029.1;Name=WP_000147029.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=CCO46_RS01545;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147029.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 269048 270841 . - . ID=gene-CCO46_RS01550;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=CCO46_RS01550;old_locus_tag=CCO46_01550 NZ_NPOH01000001.1 Protein Homology CDS 269048 270841 . - 0 ID=cds-WP_000070982.1;Parent=gene-CCO46_RS01550;Dbxref=GenBank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=CCO46_RS01550;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 270838 271956 . - . ID=gene-CCO46_RS01555;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=CCO46_RS01555;old_locus_tag=CCO46_01555 NZ_NPOH01000001.1 Protein Homology CDS 270838 271956 . - 0 ID=cds-WP_058331823.1;Parent=gene-CCO46_RS01555;Dbxref=GenBank:WP_058331823.1;Name=WP_058331823.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=CCO46_RS01555;product=hydrogenase 1 small subunit;protein_id=WP_058331823.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 272305 272376 . - . ID=gene-CCO46_RS25785;Name=CCO46_RS25785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25785;partial=true;pseudo=true;start_range=.,272305 NZ_NPOH01000001.1 Protein Homology CDS 272305 272376 . - 0 ID=cds-CCO46_RS25785;Parent=gene-CCO46_RS25785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135374.1;locus_tag=CCO46_RS25785;partial=true;product=hypothetical protein;pseudo=true;start_range=.,272305;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 272871 273326 . - . ID=gene-CCO46_RS01560;Name=CCO46_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01560;old_locus_tag=CCO46_01560 NZ_NPOH01000001.1 Protein Homology CDS 272871 273326 . - 0 ID=cds-WP_000487338.1;Parent=gene-CCO46_RS01560;Dbxref=GenBank:WP_000487338.1;Name=WP_000487338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=CCO46_RS01560;product=hypothetical protein;protein_id=WP_000487338.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 273365 273985 . - . ID=gene-CCO46_RS01565;Name=CCO46_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01565;old_locus_tag=CCO46_01565 NZ_NPOH01000001.1 Protein Homology CDS 273365 273985 . - 0 ID=cds-WP_024146062.1;Parent=gene-CCO46_RS01565;Dbxref=GenBank:WP_024146062.1;Name=WP_024146062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=CCO46_RS01565;product=hypothetical protein;protein_id=WP_024146062.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 274744 275835 . - . ID=gene-CCO46_RS01570;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CCO46_RS01570;old_locus_tag=CCO46_01570 NZ_NPOH01000001.1 Protein Homology CDS 274744 275835 . - 0 ID=cds-WP_000505850.1;Parent=gene-CCO46_RS01570;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=CCO46_RS01570;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 275952 276536 . - . ID=gene-CCO46_RS01575;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CCO46_RS01575;old_locus_tag=CCO46_01575 NZ_NPOH01000001.1 Protein Homology CDS 275952 276536 . - 0 ID=cds-WP_000985595.1;Parent=gene-CCO46_RS01575;Dbxref=GenBank:WP_000985595.1;Name=WP_000985595.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=CCO46_RS01575;product=aminoacyl-tRNA hydrolase;protein_id=WP_000985595.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 276812 277090 . + . ID=gene-CCO46_RS01580;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=CCO46_RS01580;old_locus_tag=CCO46_01580 NZ_NPOH01000001.1 Protein Homology CDS 276812 277090 . + 0 ID=cds-WP_000823878.1;Parent=gene-CCO46_RS01580;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=CCO46_RS01580;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 277135 278820 . - . ID=gene-CCO46_RS01585;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=CCO46_RS01585;old_locus_tag=CCO46_01585 NZ_NPOH01000001.1 Protein Homology CDS 277135 278820 . - 0 ID=cds-WP_001037181.1;Parent=gene-CCO46_RS01585;Dbxref=GenBank:WP_001037181.1;Name=WP_001037181.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=CCO46_RS01585;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037181.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 278945 279892 . - . ID=gene-CCO46_RS01590;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=CCO46_RS01590;old_locus_tag=CCO46_01590 NZ_NPOH01000001.1 Protein Homology CDS 278945 279892 . - 0 ID=cds-WP_001518537.1;Parent=gene-CCO46_RS01590;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=CCO46_RS01590;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 280158 281009 . - . ID=gene-CCO46_RS01595;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CCO46_RS01595;old_locus_tag=CCO46_01595 NZ_NPOH01000001.1 Protein Homology CDS 280158 281009 . - 0 ID=cds-WP_000988253.1;Parent=gene-CCO46_RS01595;Dbxref=GenBank:WP_000988253.1;Name=WP_000988253.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=CCO46_RS01595;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988253.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 281006 281629 . - . ID=gene-CCO46_RS01600;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=CCO46_RS01600;old_locus_tag=CCO46_01600 NZ_NPOH01000001.1 Protein Homology CDS 281006 281629 . - 0 ID=cds-WP_000174484.1;Parent=gene-CCO46_RS01600;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=CCO46_RS01600;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 281943 283199 . + . ID=gene-CCO46_RS01605;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CCO46_RS01605;old_locus_tag=CCO46_01605 NZ_NPOH01000001.1 Protein Homology CDS 281943 283199 . + 0 ID=cds-WP_000173208.1;Parent=gene-CCO46_RS01605;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=CCO46_RS01605;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 283240 284322 . + . ID=gene-CCO46_RS01610;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CCO46_RS01610;old_locus_tag=CCO46_01610 NZ_NPOH01000001.1 Protein Homology CDS 283240 284322 . + 0 ID=cds-WP_000804703.1;Parent=gene-CCO46_RS01610;Dbxref=GenBank:WP_000804703.1;Name=WP_000804703.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=CCO46_RS01610;product=peptide chain release factor 1;protein_id=WP_000804703.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 284322 285155 . + . ID=gene-CCO46_RS01615;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CCO46_RS01615;old_locus_tag=CCO46_01615 NZ_NPOH01000001.1 Protein Homology CDS 284322 285155 . + 0 ID=cds-WP_000347313.1;Parent=gene-CCO46_RS01615;Dbxref=GenBank:WP_000347313.1;Name=WP_000347313.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=CCO46_RS01615;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000347313.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 285152 285541 . + . ID=gene-CCO46_RS01620;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=CCO46_RS01620;old_locus_tag=CCO46_01620 NZ_NPOH01000001.1 Protein Homology CDS 285152 285541 . + 0 ID=cds-WP_058331766.1;Parent=gene-CCO46_RS01620;Dbxref=GenBank:WP_058331766.1;Name=WP_058331766.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=CCO46_RS01620;product=invasion regulator SirB2;protein_id=WP_058331766.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 285545 286354 . + . ID=gene-CCO46_RS01625;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=CCO46_RS01625;old_locus_tag=CCO46_01625 NZ_NPOH01000001.1 Protein Homology CDS 285545 286354 . + 0 ID=cds-WP_001257065.1;Parent=gene-CCO46_RS01625;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=CCO46_RS01625;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 286392 287246 . + . ID=gene-CCO46_RS01630;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=CCO46_RS01630;old_locus_tag=CCO46_01630 NZ_NPOH01000001.1 Protein Homology CDS 286392 287246 . + 0 ID=cds-WP_000811046.1;Parent=gene-CCO46_RS01630;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=CCO46_RS01630;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 287300 288400 . - . ID=gene-CCO46_RS01635;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=CCO46_RS01635;old_locus_tag=CCO46_01635 NZ_NPOH01000001.1 Protein Homology CDS 287300 288400 . - 0 ID=cds-WP_000148418.1;Parent=gene-CCO46_RS01635;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=CCO46_RS01635;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 288667 288897 . + . ID=gene-CCO46_RS01640;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=CCO46_RS01640;old_locus_tag=CCO46_01640 NZ_NPOH01000001.1 Protein Homology CDS 288667 288897 . + 0 ID=cds-WP_001146392.1;Parent=gene-CCO46_RS01640;Dbxref=GenBank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=CCO46_RS01640;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 288977 289330 . - . ID=gene-CCO46_RS01645;Name=CCO46_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01645;old_locus_tag=CCO46_01645 NZ_NPOH01000001.1 Protein Homology CDS 288977 289330 . - 0 ID=cds-WP_001179794.1;Parent=gene-CCO46_RS01645;Dbxref=GenBank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=CCO46_RS01645;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179794.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 289507 290931 . + . ID=gene-CCO46_RS01650;Name=CCO46_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01650;old_locus_tag=CCO46_01650 NZ_NPOH01000001.1 Protein Homology CDS 289507 290931 . + 0 ID=cds-WP_001116346.1;Parent=gene-CCO46_RS01650;Dbxref=GenBank:WP_001116346.1;Name=WP_001116346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=CCO46_RS01650;product=YchO/YchP family invasin;protein_id=WP_001116346.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 290932 291582 . - . ID=gene-CCO46_RS01655;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=CCO46_RS01655;old_locus_tag=CCO46_01655 NZ_NPOH01000001.1 Protein Homology CDS 290932 291582 . - 0 ID=cds-WP_001064598.1;Parent=gene-CCO46_RS01655;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=CCO46_RS01655;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 291575 293371 . - . ID=gene-CCO46_RS01660;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=CCO46_RS01660;old_locus_tag=CCO46_01660 NZ_NPOH01000001.1 Protein Homology CDS 291575 293371 . - 0 ID=cds-WP_097363205.1;Parent=gene-CCO46_RS01660;Dbxref=GenBank:WP_097363205.1;Name=WP_097363205.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=CCO46_RS01660;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_097363205.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 293712 295109 . + . ID=gene-CCO46_RS01670;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=CCO46_RS01670;old_locus_tag=CCO46_01670 NZ_NPOH01000001.1 Protein Homology CDS 293712 295109 . + 0 ID=cds-WP_000019848.1;Parent=gene-CCO46_RS01670;Dbxref=GenBank:WP_000019848.1;Name=WP_000019848.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=CCO46_RS01670;product=nitrate transporter NarK;protein_id=WP_000019848.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 295497 299240 . + . ID=gene-CCO46_RS01675;Name=CCO46_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01675;old_locus_tag=CCO46_01675 NZ_NPOH01000001.1 Protein Homology CDS 295497 299240 . + 0 ID=cds-WP_097363206.1;Parent=gene-CCO46_RS01675;Dbxref=GenBank:WP_097363206.1;Name=WP_097363206.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=CCO46_RS01675;product=nitrate reductase subunit alpha;protein_id=WP_097363206.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 299237 300772 . + . ID=gene-CCO46_RS01680;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO46_RS01680;old_locus_tag=CCO46_01680 NZ_NPOH01000001.1 Protein Homology CDS 299237 300772 . + 0 ID=cds-WP_000702629.1;Parent=gene-CCO46_RS01680;Dbxref=GenBank:WP_000702629.1;Name=WP_000702629.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=CCO46_RS01680;product=nitrate reductase subunit beta;protein_id=WP_000702629.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 300769 301479 . + . ID=gene-CCO46_RS01685;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=CCO46_RS01685;old_locus_tag=CCO46_01685 NZ_NPOH01000001.1 Protein Homology CDS 300769 301479 . + 0 ID=cds-WP_000571667.1;Parent=gene-CCO46_RS01685;Dbxref=GenBank:WP_000571667.1;Name=WP_000571667.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=CCO46_RS01685;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571667.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 301479 302156 . + . ID=gene-CCO46_RS01690;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO46_RS01690;old_locus_tag=CCO46_01690 NZ_NPOH01000001.1 Protein Homology CDS 301479 302156 . + 0 ID=cds-WP_000545594.1;Parent=gene-CCO46_RS01690;Dbxref=GenBank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=CCO46_RS01690;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 302398 303927 . + . ID=gene-CCO46_RS01700;Name=CCO46_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01700;old_locus_tag=CCO46_01700 NZ_NPOH01000001.1 Protein Homology CDS 302398 303927 . + 0 ID=cds-WP_001212708.1;Parent=gene-CCO46_RS01700;Dbxref=GenBank:WP_001212708.1;Name=WP_001212708.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=CCO46_RS01700;product=tetratricopeptide repeat protein;protein_id=WP_001212708.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 304030 304161 . - . ID=gene-CCO46_RS01705;Name=CCO46_RS01705;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO46_RS01705;old_locus_tag=CCO46_01705 NZ_NPOH01000001.1 cmsearch ncRNA 304030 304161 . - . ID=rna-CCO46_RS01705;Parent=gene-CCO46_RS01705;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS01705;product=RtT sRNA NZ_NPOH01000001.1 cmsearch exon 304030 304161 . - . ID=exon-CCO46_RS01705-1;Parent=rna-CCO46_RS01705;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS01705;product=RtT sRNA NZ_NPOH01000001.1 RefSeq gene 304205 304336 . - . ID=gene-CCO46_RS01710;Name=CCO46_RS01710;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO46_RS01710;old_locus_tag=CCO46_01710 NZ_NPOH01000001.1 cmsearch ncRNA 304205 304336 . - . ID=rna-CCO46_RS01710;Parent=gene-CCO46_RS01710;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS01710;product=RtT sRNA NZ_NPOH01000001.1 cmsearch exon 304205 304336 . - . ID=exon-CCO46_RS01710-1;Parent=rna-CCO46_RS01710;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS01710;product=RtT sRNA NZ_NPOH01000001.1 RefSeq gene 304381 304511 . - . ID=gene-CCO46_RS01715;Name=CCO46_RS01715;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO46_RS01715;old_locus_tag=CCO46_01715 NZ_NPOH01000001.1 cmsearch ncRNA 304381 304511 . - . ID=rna-CCO46_RS01715;Parent=gene-CCO46_RS01715;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS01715;product=RtT sRNA NZ_NPOH01000001.1 cmsearch exon 304381 304511 . - . ID=exon-CCO46_RS01715-1;Parent=rna-CCO46_RS01715;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS01715;product=RtT sRNA NZ_NPOH01000001.1 RefSeq gene 304562 304646 . - . ID=gene-CCO46_RS01720;Name=CCO46_RS01720;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS01720;old_locus_tag=CCO46_01720 NZ_NPOH01000001.1 tRNAscan-SE tRNA 304562 304646 . - . ID=rna-CCO46_RS01720;Parent=gene-CCO46_RS01720;anticodon=(pos:complement(304610..304612));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS01720;product=tRNA-Tyr NZ_NPOH01000001.1 tRNAscan-SE exon 304562 304646 . - . ID=exon-CCO46_RS01720-1;Parent=rna-CCO46_RS01720;anticodon=(pos:complement(304610..304612));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS01720;product=tRNA-Tyr NZ_NPOH01000001.1 RefSeq gene 304681 304812 . - . ID=gene-CCO46_RS01725;Name=CCO46_RS01725;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO46_RS01725;old_locus_tag=CCO46_01725 NZ_NPOH01000001.1 cmsearch ncRNA 304681 304812 . - . ID=rna-CCO46_RS01725;Parent=gene-CCO46_RS01725;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS01725;product=RtT sRNA NZ_NPOH01000001.1 cmsearch exon 304681 304812 . - . ID=exon-CCO46_RS01725-1;Parent=rna-CCO46_RS01725;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS01725;product=RtT sRNA NZ_NPOH01000001.1 RefSeq gene 304857 304941 . - . ID=gene-CCO46_RS01730;Name=CCO46_RS01730;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS01730;old_locus_tag=CCO46_01730 NZ_NPOH01000001.1 tRNAscan-SE tRNA 304857 304941 . - . ID=rna-CCO46_RS01730;Parent=gene-CCO46_RS01730;anticodon=(pos:complement(304905..304907));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS01730;product=tRNA-Tyr NZ_NPOH01000001.1 tRNAscan-SE exon 304857 304941 . - . ID=exon-CCO46_RS01730-1;Parent=rna-CCO46_RS01730;anticodon=(pos:complement(304905..304907));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS01730;product=tRNA-Tyr NZ_NPOH01000001.1 RefSeq gene 304970 305111 . - . ID=gene-CCO46_RS01735;Name=CCO46_RS01735;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO46_RS01735;old_locus_tag=CCO46_01735 NZ_NPOH01000001.1 cmsearch ncRNA 304970 305111 . - . ID=rna-CCO46_RS01735;Parent=gene-CCO46_RS01735;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS01735;product=RtT sRNA NZ_NPOH01000001.1 cmsearch exon 304970 305111 . - . ID=exon-CCO46_RS01735-1;Parent=rna-CCO46_RS01735;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS01735;product=RtT sRNA NZ_NPOH01000001.1 RefSeq gene 305282 306124 . - . ID=gene-CCO46_RS01740;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=CCO46_RS01740;old_locus_tag=CCO46_01740 NZ_NPOH01000001.1 Protein Homology CDS 305282 306124 . - 0 ID=cds-WP_001191156.1;Parent=gene-CCO46_RS01740;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=CCO46_RS01740;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 306175 306633 . - . ID=gene-CCO46_RS01745;Name=CCO46_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01745;old_locus_tag=CCO46_01745 NZ_NPOH01000001.1 Protein Homology CDS 306175 306633 . - 0 ID=cds-WP_001540172.1;Parent=gene-CCO46_RS01745;Dbxref=GenBank:WP_001540172.1;Name=WP_001540172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=CCO46_RS01745;product=YchJ family protein;protein_id=WP_001540172.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 306744 307649 . + . ID=gene-CCO46_RS01750;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=CCO46_RS01750;old_locus_tag=CCO46_01750 NZ_NPOH01000001.1 Protein Homology CDS 306744 307649 . + 0 ID=cds-WP_001230575.1;Parent=gene-CCO46_RS01750;Dbxref=GenBank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=CCO46_RS01750;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 307740 308753 . + . ID=gene-CCO46_RS01755;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=CCO46_RS01755;old_locus_tag=CCO46_01755 NZ_NPOH01000001.1 Protein Homology CDS 307740 308753 . + 0 ID=cds-WP_000193432.1;Parent=gene-CCO46_RS01755;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=CCO46_RS01755;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 308956 309864 . + . ID=gene-CCO46_RS01760;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CCO46_RS01760;old_locus_tag=CCO46_01760 NZ_NPOH01000001.1 Protein Homology CDS 308956 309864 . + 0 ID=cds-WP_000729450.1;Parent=gene-CCO46_RS01760;Dbxref=GenBank:WP_000729450.1;Name=WP_000729450.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=CCO46_RS01760;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729450.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 309996 310409 . - . ID=gene-CCO46_RS01765;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=CCO46_RS01765;old_locus_tag=CCO46_01765 NZ_NPOH01000001.1 Protein Homology CDS 309996 310409 . - 0 ID=cds-WP_001287383.1;Parent=gene-CCO46_RS01765;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=CCO46_RS01765;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 311072 311689 . + . ID=gene-CCO46_RS01770;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=CCO46_RS01770;old_locus_tag=CCO46_01770 NZ_NPOH01000001.1 Protein Homology CDS 311072 311689 . + 0 ID=cds-WP_000068097.1;Parent=gene-CCO46_RS01770;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=CCO46_RS01770;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 311886 314564 . - . ID=gene-CCO46_RS01775;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=CCO46_RS01775;old_locus_tag=CCO46_01775 NZ_NPOH01000001.1 Protein Homology CDS 311886 314564 . - 0 ID=cds-WP_000301678.1;Parent=gene-CCO46_RS01775;Dbxref=GenBank:WP_000301678.1;Name=WP_000301678.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=CCO46_RS01775;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301678.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 315041 315688 . + . ID=gene-CCO46_RS01780;Name=CCO46_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01780;old_locus_tag=CCO46_01780 NZ_NPOH01000001.1 Protein Homology CDS 315041 315688 . + 0 ID=cds-WP_000615840.1;Parent=gene-CCO46_RS01780;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=CCO46_RS01780;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 316465 318096 . + . ID=gene-CCO46_RS01790;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=CCO46_RS01790;old_locus_tag=CCO46_01790 NZ_NPOH01000001.1 Protein Homology CDS 316465 318096 . + 0 ID=cds-WP_023182233.1;Parent=gene-CCO46_RS01790;Dbxref=GenBank:WP_023182233.1;Name=WP_023182233.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=CCO46_RS01790;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_023182233.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 318218 319138 . + . ID=gene-CCO46_RS01795;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=CCO46_RS01795;old_locus_tag=CCO46_01795 NZ_NPOH01000001.1 Protein Homology CDS 318218 319138 . + 0 ID=cds-WP_000911097.1;Parent=gene-CCO46_RS01795;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=CCO46_RS01795;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 319153 320061 . + . ID=gene-CCO46_RS01800;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=CCO46_RS01800;old_locus_tag=CCO46_01800 NZ_NPOH01000001.1 Protein Homology CDS 319153 320061 . + 0 ID=cds-WP_000979653.1;Parent=gene-CCO46_RS01800;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=CCO46_RS01800;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 320073 321080 . + . ID=gene-CCO46_RS01805;Name=CCO46_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01805;old_locus_tag=CCO46_01805 NZ_NPOH01000001.1 Protein Homology CDS 320073 321080 . + 0 ID=cds-WP_000058857.1;Parent=gene-CCO46_RS01805;Dbxref=GenBank:WP_000058857.1;Name=WP_000058857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=CCO46_RS01805;product=ABC transporter ATP-binding protein;protein_id=WP_000058857.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 321077 322081 . + . ID=gene-CCO46_RS01810;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=CCO46_RS01810;old_locus_tag=CCO46_01810 NZ_NPOH01000001.1 Protein Homology CDS 321077 322081 . + 0 ID=cds-WP_000994698.1;Parent=gene-CCO46_RS01810;Dbxref=GenBank:WP_000994698.1;Name=WP_000994698.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=CCO46_RS01810;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994698.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 322129 322965 . + . ID=gene-CCO46_RS01815;Name=CCO46_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01815;old_locus_tag=CCO46_01815 NZ_NPOH01000001.1 Protein Homology CDS 322129 322965 . + 0 ID=cds-WP_000059074.1;Parent=gene-CCO46_RS01815;Dbxref=GenBank:WP_000059074.1;Name=WP_000059074.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=CCO46_RS01815;product=ion transporter;protein_id=WP_000059074.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 323013 323342 . - . ID=gene-CCO46_RS01820;Name=CCO46_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01820;old_locus_tag=CCO46_01820 NZ_NPOH01000001.1 Protein Homology CDS 323013 323342 . - 0 ID=cds-WP_000425070.1;Parent=gene-CCO46_RS01820;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=CCO46_RS01820;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 323376 324836 . - . ID=gene-CCO46_RS01825;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CCO46_RS01825;old_locus_tag=CCO46_01825 NZ_NPOH01000001.1 Protein Homology CDS 323376 324836 . - 0 ID=cds-WP_000206886.1;Parent=gene-CCO46_RS01825;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=CCO46_RS01825;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 324979 325152 . + . ID=gene-CCO46_RS01830;Name=CCO46_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01830;old_locus_tag=CCO46_01830 NZ_NPOH01000001.1 Protein Homology CDS 324979 325152 . + 0 ID=cds-WP_001531561.1;Parent=gene-CCO46_RS01830;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=CCO46_RS01830;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 325196 325492 . - . ID=gene-CCO46_RS01835;Name=CCO46_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01835;old_locus_tag=CCO46_01835 NZ_NPOH01000001.1 Protein Homology CDS 325196 325492 . - 0 ID=cds-WP_000967605.1;Parent=gene-CCO46_RS01835;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=CCO46_RS01835;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 325716 326444 . + . ID=gene-CCO46_RS01840;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=CCO46_RS01840;old_locus_tag=CCO46_01840 NZ_NPOH01000001.1 Protein Homology CDS 325716 326444 . + 0 ID=cds-WP_097363220.1;Parent=gene-CCO46_RS01840;Dbxref=GenBank:WP_097363220.1;Name=WP_097363220.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=CCO46_RS01840;product=TonB system transport protein TonB;protein_id=WP_097363220.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 326504 326905 . - . ID=gene-CCO46_RS01845;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=CCO46_RS01845;old_locus_tag=CCO46_01845 NZ_NPOH01000001.1 Protein Homology CDS 326504 326905 . - 0 ID=cds-WP_000210317.1;Parent=gene-CCO46_RS01845;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=CCO46_RS01845;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 327066 327605 . - . ID=gene-CCO46_RS01850;Name=CCO46_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01850;old_locus_tag=CCO46_01850 NZ_NPOH01000001.1 Protein Homology CDS 327066 327605 . - 0 ID=cds-WP_000808682.1;Parent=gene-CCO46_RS01850;Dbxref=GenBank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=CCO46_RS01850;product=septation protein A;protein_id=WP_000808682.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 327662 328405 . - . ID=gene-CCO46_RS01855;Name=CCO46_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01855;old_locus_tag=CCO46_01855 NZ_NPOH01000001.1 Protein Homology CDS 327662 328405 . - 0 ID=cds-WP_000028507.1;Parent=gene-CCO46_RS01855;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=CCO46_RS01855;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 328431 328835 . - . ID=gene-CCO46_RS01860;Name=CCO46_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01860;old_locus_tag=CCO46_01860 NZ_NPOH01000001.1 Protein Homology CDS 328431 328835 . - 0 ID=cds-WP_076726667.1;Parent=gene-CCO46_RS01860;Dbxref=GenBank:WP_076726667.1;Name=WP_076726667.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=CCO46_RS01860;product=YkgJ family cysteine cluster protein;protein_id=WP_076726667.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 329171 329809 . + . ID=gene-CCO46_RS01865;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=CCO46_RS01865;old_locus_tag=CCO46_01865 NZ_NPOH01000001.1 Protein Homology CDS 329171 329809 . + 0 ID=cds-WP_000714798.1;Parent=gene-CCO46_RS01865;Dbxref=GenBank:WP_000714798.1;Name=WP_000714798.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=CCO46_RS01865;product=outer membrane protein OmpW;protein_id=WP_000714798.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 329891 330769 . - . ID=gene-CCO46_RS01870;Name=CCO46_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01870;old_locus_tag=CCO46_01870 NZ_NPOH01000001.1 Protein Homology CDS 329891 330769 . - 0 ID=cds-WP_000488354.1;Parent=gene-CCO46_RS01870;Dbxref=GenBank:WP_000488354.1;Name=WP_000488354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=CCO46_RS01870;product=manganese catalase family protein;protein_id=WP_000488354.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 330789 331295 . - . ID=gene-CCO46_RS01875;Name=CCO46_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01875;old_locus_tag=CCO46_01875 NZ_NPOH01000001.1 Protein Homology CDS 330789 331295 . - 0 ID=cds-WP_001109977.1;Parent=gene-CCO46_RS01875;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=CCO46_RS01875;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 331369 331872 . - . ID=gene-CCO46_RS01880;Name=CCO46_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01880;old_locus_tag=CCO46_01880 NZ_NPOH01000001.1 Protein Homology CDS 331369 331872 . - 0 ID=cds-WP_094887686.1;Parent=gene-CCO46_RS01880;Dbxref=GenBank:WP_094887686.1;Name=WP_094887686.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=CCO46_RS01880;product=ferritin-like domain-containing protein;protein_id=WP_094887686.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 331962 332144 . - . ID=gene-CCO46_RS01885;Name=CCO46_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01885;old_locus_tag=CCO46_01885 NZ_NPOH01000001.1 Protein Homology CDS 331962 332144 . - 0 ID=cds-WP_000807657.1;Parent=gene-CCO46_RS01885;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=CCO46_RS01885;product=general stress protein;protein_id=WP_000807657.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 332624 333430 . - . ID=gene-CCO46_RS01890;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CCO46_RS01890;old_locus_tag=CCO46_01890 NZ_NPOH01000001.1 Protein Homology CDS 332624 333430 . - 0 ID=cds-WP_094887687.1;Parent=gene-CCO46_RS01890;Dbxref=GenBank:WP_094887687.1;Name=WP_094887687.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=CCO46_RS01890;product=tryptophan synthase subunit alpha;protein_id=WP_094887687.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 333430 334623 . - . ID=gene-CCO46_RS01895;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CCO46_RS01895;old_locus_tag=CCO46_01895 NZ_NPOH01000001.1 Protein Homology CDS 333430 334623 . - 0 ID=cds-WP_000209485.1;Parent=gene-CCO46_RS01895;Dbxref=GenBank:WP_000209485.1;Name=WP_000209485.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=CCO46_RS01895;product=tryptophan synthase subunit beta;protein_id=WP_000209485.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 334633 335991 . - . ID=gene-CCO46_RS01900;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=CCO46_RS01900;old_locus_tag=CCO46_01900 NZ_NPOH01000001.1 Protein Homology CDS 334633 335991 . - 0 ID=cds-WP_094887688.1;Parent=gene-CCO46_RS01900;Dbxref=GenBank:WP_094887688.1;Name=WP_094887688.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=CCO46_RS01900;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_094887688.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 335995 337590 . - . ID=gene-CCO46_RS01905;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CCO46_RS01905;old_locus_tag=CCO46_01905 NZ_NPOH01000001.1 Protein Homology CDS 335995 337590 . - 0 ID=cds-WP_079821371.1;Parent=gene-CCO46_RS01905;Dbxref=GenBank:WP_079821371.1;Name=WP_079821371.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=CCO46_RS01905;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_079821371.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 337590 339152 . - . ID=gene-CCO46_RS01910;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=CCO46_RS01910;old_locus_tag=CCO46_01910 NZ_NPOH01000001.1 Protein Homology CDS 337590 339152 . - 0 ID=cds-WP_024797890.1;Parent=gene-CCO46_RS01910;Dbxref=GenBank:WP_024797890.1;Name=WP_024797890.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=CCO46_RS01910;product=anthranilate synthase component I;protein_id=WP_024797890.1;transl_table=11 NZ_NPOH01000001.1 cmsearch sequence_feature 339175 339270 . - . ID=id-NZ_NPOH01000001.1:339175..339270;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPOH01000001.1 RefSeq gene 339247 339291 . - . ID=gene-CCO46_RS01915;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=CCO46_RS01915;old_locus_tag=CCO46_01915 NZ_NPOH01000001.1 Protein Homology CDS 339247 339291 . - 0 ID=cds-WP_010989026.1;Parent=gene-CCO46_RS01915;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=CCO46_RS01915;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 339413 340294 . + . ID=gene-CCO46_RS01920;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=CCO46_RS01920;old_locus_tag=CCO46_01920 NZ_NPOH01000001.1 Protein Homology CDS 339413 340294 . + 0 ID=cds-WP_000500435.1;Parent=gene-CCO46_RS01920;Dbxref=GenBank:WP_000500435.1;Name=WP_000500435.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=CCO46_RS01920;product=RNase RNM;protein_id=WP_000500435.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 340302 340922 . + . ID=gene-CCO46_RS01925;Name=CCO46_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01925;old_locus_tag=CCO46_01925 NZ_NPOH01000001.1 Protein Homology CDS 340302 340922 . + 0 ID=cds-WP_000077250.1;Parent=gene-CCO46_RS01925;Dbxref=GenBank:WP_000077250.1;Name=WP_000077250.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=CCO46_RS01925;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077250.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 341023 341898 . + . ID=gene-CCO46_RS01930;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=CCO46_RS01930;old_locus_tag=CCO46_01930 NZ_NPOH01000001.1 Protein Homology CDS 341023 341898 . + 0 ID=cds-WP_001291233.1;Parent=gene-CCO46_RS01930;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=CCO46_RS01930;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 341985 342575 . - . ID=gene-CCO46_RS01935;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=CCO46_RS01935;old_locus_tag=CCO46_01935 NZ_NPOH01000001.1 Protein Homology CDS 341985 342575 . - 0 ID=cds-WP_001278856.1;Parent=gene-CCO46_RS01935;Dbxref=GenBank:WP_001278856.1;Name=WP_001278856.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=CCO46_RS01935;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278856.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 342572 343333 . - . ID=gene-CCO46_RS01940;Name=CCO46_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01940;old_locus_tag=CCO46_01940 NZ_NPOH01000001.1 Protein Homology CDS 342572 343333 . - 0 ID=cds-WP_000559310.1;Parent=gene-CCO46_RS01940;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=CCO46_RS01940;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 343571 344617 . + . ID=gene-CCO46_RS01945;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=CCO46_RS01945;old_locus_tag=CCO46_01945 NZ_NPOH01000001.1 Protein Homology CDS 343571 344617 . + 0 ID=cds-WP_000422082.1;Parent=gene-CCO46_RS01945;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=CCO46_RS01945;product=protease SohB;protein_id=WP_000422082.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 344659 344910 . - . ID=gene-CCO46_RS01950;Name=CCO46_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01950;old_locus_tag=CCO46_01950 NZ_NPOH01000001.1 Protein Homology CDS 344659 344910 . - 0 ID=cds-WP_000548616.1;Parent=gene-CCO46_RS01950;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=CCO46_RS01950;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 345313 347910 . + . ID=gene-CCO46_RS01960;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CCO46_RS01960;old_locus_tag=CCO46_01960 NZ_NPOH01000001.1 Protein Homology CDS 345313 347910 . + 0 ID=cds-WP_000513593.1;Parent=gene-CCO46_RS01960;Dbxref=GenBank:WP_000513593.1;Name=WP_000513593.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=CCO46_RS01960;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 348321 349295 . + . ID=gene-CCO46_RS01970;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=CCO46_RS01970;old_locus_tag=CCO46_01970 NZ_NPOH01000001.1 Protein Homology CDS 348321 349295 . + 0 ID=cds-WP_000776233.1;Parent=gene-CCO46_RS01970;Dbxref=GenBank:WP_000776233.1;Name=WP_000776233.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=CCO46_RS01970;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776233.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 349576 349716 . + . ID=gene-CCO46_RS01975;Name=CCO46_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS01975;old_locus_tag=CCO46_01975 NZ_NPOH01000001.1 Protein Homology CDS 349576 349716 . + 0 ID=cds-WP_213083417.1;Parent=gene-CCO46_RS01975;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=CCO46_RS01975;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 349997 350089 . + . ID=gene-CCO46_RS25360;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=CCO46_RS25360 NZ_NPOH01000001.1 Protein Homology CDS 349997 350089 . + 0 ID=cds-WP_223148964.1;Parent=gene-CCO46_RS25360;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=CCO46_RS25360;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 350272 352947 . + . ID=gene-CCO46_RS01990;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CCO46_RS01990;old_locus_tag=CCO46_01990 NZ_NPOH01000001.1 Protein Homology CDS 350272 352947 . + 0 ID=cds-WP_097363207.1;Parent=gene-CCO46_RS01990;Dbxref=GenBank:WP_097363207.1;Name=WP_097363207.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=CCO46_RS01990;product=aconitate hydratase AcnA;protein_id=WP_097363207.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 353003 353593 . - . ID=gene-CCO46_RS01995;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=CCO46_RS01995;old_locus_tag=CCO46_01995 NZ_NPOH01000001.1 Protein Homology CDS 353003 353593 . - 0 ID=cds-WP_001176284.1;Parent=gene-CCO46_RS01995;Dbxref=GenBank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=CCO46_RS01995;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 353789 354553 . + . ID=gene-CCO46_RS02000;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=CCO46_RS02000;old_locus_tag=CCO46_02000 NZ_NPOH01000001.1 Protein Homology CDS 353789 354553 . + 0 ID=cds-WP_000948651.1;Parent=gene-CCO46_RS02000;Dbxref=GenBank:WP_000948651.1;Name=WP_000948651.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=CCO46_RS02000;product=phosphatidylglycerophosphatase B;protein_id=WP_000948651.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 354703 355011 . + . ID=gene-CCO46_RS02010;Name=CCO46_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02010;old_locus_tag=CCO46_02010 NZ_NPOH01000001.1 Protein Homology CDS 354703 355011 . + 0 ID=cds-WP_000876301.1;Parent=gene-CCO46_RS02010;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=CCO46_RS02010;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 355018 356187 . + . ID=gene-CCO46_RS02015;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=CCO46_RS02015;old_locus_tag=CCO46_02015 NZ_NPOH01000001.1 Protein Homology CDS 355018 356187 . + 0 ID=cds-WP_000891378.1;Parent=gene-CCO46_RS02015;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=CCO46_RS02015;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 356378 357115 . + . ID=gene-CCO46_RS02020;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CCO46_RS02020;old_locus_tag=CCO46_02020 NZ_NPOH01000001.1 Protein Homology CDS 356378 357115 . + 0 ID=cds-WP_001675160.1;Parent=gene-CCO46_RS02020;Dbxref=GenBank:WP_001675160.1;Name=WP_001675160.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=CCO46_RS02020;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_001675160.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 357115 357441 . + . ID=gene-CCO46_RS02025;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=CCO46_RS02025;old_locus_tag=CCO46_02025 NZ_NPOH01000001.1 Protein Homology CDS 357115 357441 . + 0 ID=cds-WP_001285199.1;Parent=gene-CCO46_RS02025;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=CCO46_RS02025;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 357561 357779 . - . ID=gene-CCO46_RS02030;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=CCO46_RS02030;old_locus_tag=CCO46_02030 NZ_NPOH01000001.1 Protein Homology CDS 357561 357779 . - 0 ID=cds-WP_061372242.1;Parent=gene-CCO46_RS02030;Dbxref=GenBank:WP_061372242.1;Name=WP_061372242.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=CCO46_RS02030;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_061372242.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 358038 358790 . - . ID=gene-CCO46_RS02035;Name=CCO46_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02035;old_locus_tag=CCO46_02035 NZ_NPOH01000001.1 Protein Homology CDS 358038 358790 . - 0 ID=cds-WP_001088594.1;Parent=gene-CCO46_RS02035;Dbxref=GenBank:WP_001088594.1;Name=WP_001088594.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=CCO46_RS02035;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088594.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 358877 359056 . - . ID=gene-CCO46_RS02040;Name=CCO46_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02040;old_locus_tag=CCO46_02040 NZ_NPOH01000001.1 Protein Homology CDS 358877 359056 . - 0 ID=cds-WP_076735109.1;Parent=gene-CCO46_RS02040;Dbxref=GenBank:WP_076735109.1;Name=WP_076735109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=CCO46_RS02040;product=hypothetical protein;protein_id=WP_076735109.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 359178 361160 . - . ID=gene-CCO46_RS02045;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=CCO46_RS02045;old_locus_tag=CCO46_02045 NZ_NPOH01000001.1 Protein Homology CDS 359178 361160 . - 0 ID=cds-WP_024146146.1;Parent=gene-CCO46_RS02045;Dbxref=GenBank:WP_024146146.1;Name=WP_024146146.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=CCO46_RS02045;product=cyclic di-GMP phosphodiesterase;protein_id=WP_024146146.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 361422 363356 . - . ID=gene-CCO46_RS02055;Name=CCO46_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02055;old_locus_tag=CCO46_02055 NZ_NPOH01000001.1 Protein Homology CDS 361422 363356 . - 0 ID=cds-WP_000485041.1;Parent=gene-CCO46_RS02055;Dbxref=GenBank:WP_000485041.1;Name=WP_000485041.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=CCO46_RS02055;product=exoribonuclease II;protein_id=WP_000485041.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 363601 364578 . - . ID=gene-CCO46_RS02060;Name=CCO46_RS02060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS02060;old_locus_tag=CCO46_02060;partial=true;pseudo=true;start_range=.,363601 NZ_NPOH01000001.1 Protein Homology CDS 363601 364578 . - 0 ID=cds-CCO46_RS02060;Parent=gene-CCO46_RS02060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=CCO46_RS02060;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,363601;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 364778 365566 . - . ID=gene-CCO46_RS02065;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CCO46_RS02065;old_locus_tag=CCO46_02065 NZ_NPOH01000001.1 Protein Homology CDS 364778 365566 . - 0 ID=cds-WP_000506501.1;Parent=gene-CCO46_RS02065;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=CCO46_RS02065;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 365684 365977 . - . ID=gene-CCO46_RS02070;Name=CCO46_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02070;old_locus_tag=CCO46_02070 NZ_NPOH01000001.1 Protein Homology CDS 365684 365977 . - 0 ID=cds-WP_058331450.1;Parent=gene-CCO46_RS02070;Dbxref=GenBank:WP_058331450.1;Name=WP_058331450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=CCO46_RS02070;product=hypothetical protein;protein_id=WP_058331450.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 365958 366137 . - . ID=gene-CCO46_RS02075;Name=CCO46_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02075;old_locus_tag=CCO46_02075 NZ_NPOH01000001.1 Protein Homology CDS 365958 366137 . - 0 ID=cds-WP_058331547.1;Parent=gene-CCO46_RS02075;Dbxref=GenBank:WP_058331547.1;Name=WP_058331547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=CCO46_RS02075;product=hypothetical protein;protein_id=WP_058331547.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 366171 367544 . + . ID=gene-CCO46_RS02080;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=CCO46_RS02080;old_locus_tag=CCO46_02080 NZ_NPOH01000001.1 Protein Homology CDS 366171 367544 . + 0 ID=cds-WP_094887690.1;Parent=gene-CCO46_RS02080;Dbxref=GenBank:WP_094887690.1;Name=WP_094887690.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=CCO46_RS02080;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_094887690.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 368011 368718 . + . ID=gene-CCO46_RS02085;Name=CCO46_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02085;old_locus_tag=CCO46_02085 NZ_NPOH01000001.1 Protein Homology CDS 368011 368718 . + 0 ID=cds-WP_058331451.1;Parent=gene-CCO46_RS02085;Dbxref=GenBank:WP_058331451.1;Name=WP_058331451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=CCO46_RS02085;product=EAL domain-containing protein;protein_id=WP_058331451.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 368734 369540 . - . ID=gene-CCO46_RS02090;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=CCO46_RS02090;old_locus_tag=CCO46_02090 NZ_NPOH01000001.1 Protein Homology CDS 368734 369540 . - 0 ID=cds-WP_000230462.1;Parent=gene-CCO46_RS02090;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=CCO46_RS02090;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 369542 370534 . - . ID=gene-CCO46_RS02095;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=CCO46_RS02095;old_locus_tag=CCO46_02095 NZ_NPOH01000001.1 Protein Homology CDS 369542 370534 . - 0 ID=cds-WP_001128869.1;Parent=gene-CCO46_RS02095;Dbxref=GenBank:WP_001128869.1;Name=WP_001128869.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=CCO46_RS02095;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128869.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 370534 371424 . - . ID=gene-CCO46_RS02100;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=CCO46_RS02100;old_locus_tag=CCO46_02100 NZ_NPOH01000001.1 Protein Homology CDS 370534 371424 . - 0 ID=cds-WP_094887691.1;Parent=gene-CCO46_RS02100;Dbxref=GenBank:WP_094887691.1;Name=WP_094887691.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=CCO46_RS02100;product=peptide ABC transporter permease SapC;protein_id=WP_094887691.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 371411 372376 . - . ID=gene-CCO46_RS02105;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=CCO46_RS02105;old_locus_tag=CCO46_02105 NZ_NPOH01000001.1 Protein Homology CDS 371411 372376 . - 0 ID=cds-WP_080160240.1;Parent=gene-CCO46_RS02105;Dbxref=GenBank:WP_080160240.1;Name=WP_080160240.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=CCO46_RS02105;product=peptide ABC transporter permease SapB;protein_id=WP_080160240.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 372373 374022 . - . ID=gene-CCO46_RS02110;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=CCO46_RS02110;old_locus_tag=CCO46_02110 NZ_NPOH01000001.1 Protein Homology CDS 372373 374022 . - 0 ID=cds-WP_001241629.1;Parent=gene-CCO46_RS02110;Dbxref=GenBank:WP_001241629.1;Name=WP_001241629.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=CCO46_RS02110;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241629.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 374134 375114 . - . ID=gene-CCO46_RS02115;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=CCO46_RS02115;old_locus_tag=CCO46_02115 NZ_NPOH01000001.1 Protein Homology CDS 374134 375114 . - 0 ID=cds-WP_000807306.1;Parent=gene-CCO46_RS02115;Dbxref=GenBank:WP_000807306.1;Name=WP_000807306.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=CCO46_RS02115;product=phage shock protein operon transcriptional activator;protein_id=WP_000807306.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 375285 375953 . + . ID=gene-CCO46_RS02120;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=CCO46_RS02120;old_locus_tag=CCO46_02120 NZ_NPOH01000001.1 Protein Homology CDS 375285 375953 . + 0 ID=cds-WP_000510996.1;Parent=gene-CCO46_RS02120;Dbxref=GenBank:WP_000510996.1;Name=WP_000510996.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=CCO46_RS02120;product=phage shock protein PspA;protein_id=WP_000510996.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 376013 376237 . + . ID=gene-CCO46_RS02125;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=CCO46_RS02125;old_locus_tag=CCO46_02125 NZ_NPOH01000001.1 Protein Homology CDS 376013 376237 . + 0 ID=cds-WP_001274953.1;Parent=gene-CCO46_RS02125;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=CCO46_RS02125;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 376237 376596 . + . ID=gene-CCO46_RS02130;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=CCO46_RS02130;old_locus_tag=CCO46_02130 NZ_NPOH01000001.1 Protein Homology CDS 376237 376596 . + 0 ID=cds-WP_023202035.1;Parent=gene-CCO46_RS02130;Dbxref=GenBank:WP_023202035.1;Name=WP_023202035.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=CCO46_RS02130;product=envelope stress response membrane protein PspC;protein_id=WP_023202035.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 376619 376837 . + . ID=gene-CCO46_RS02135;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=CCO46_RS02135;old_locus_tag=CCO46_02135 NZ_NPOH01000001.1 Protein Homology CDS 376619 376837 . + 0 ID=cds-WP_001097607.1;Parent=gene-CCO46_RS02135;Dbxref=GenBank:WP_001097607.1;Name=WP_001097607.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=CCO46_RS02135;product=phage shock protein PspD;protein_id=WP_001097607.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 376913 377227 . + . ID=gene-CCO46_RS02140;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=CCO46_RS02140;old_locus_tag=CCO46_02140 NZ_NPOH01000001.1 Protein Homology CDS 376913 377227 . + 0 ID=cds-WP_000913428.1;Parent=gene-CCO46_RS02140;Dbxref=GenBank:WP_000913428.1;Name=WP_000913428.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=CCO46_RS02140;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913428.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 377376 378773 . + . ID=gene-CCO46_RS02145;Name=CCO46_RS02145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS02145;old_locus_tag=CCO46_02145;pseudo=true NZ_NPOH01000001.1 Protein Homology CDS 377376 378773 . + 0 ID=cds-CCO46_RS02145;Parent=gene-CCO46_RS02145;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=CCO46_RS02145;product=YcjX family protein;pseudo=true;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 378770 379831 . + . ID=gene-CCO46_RS02150;Name=CCO46_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02150;old_locus_tag=CCO46_02150 NZ_NPOH01000001.1 Protein Homology CDS 378770 379831 . + 0 ID=cds-WP_001294463.1;Parent=gene-CCO46_RS02150;Dbxref=GenBank:WP_001294463.1;Name=WP_001294463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=CCO46_RS02150;product=YcjF family protein;protein_id=WP_001294463.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 379979 381520 . + . ID=gene-CCO46_RS02155;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=CCO46_RS02155;old_locus_tag=CCO46_02155 NZ_NPOH01000001.1 Protein Homology CDS 379979 381520 . + 0 ID=cds-WP_058331454.1;Parent=gene-CCO46_RS02155;Dbxref=GenBank:WP_058331454.1;Name=WP_058331454.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=CCO46_RS02155;product=transcriptional regulator TyrR;protein_id=WP_058331454.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 381610 382116 . - . ID=gene-CCO46_RS02160;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CCO46_RS02160;old_locus_tag=CCO46_02160 NZ_NPOH01000001.1 Protein Homology CDS 381610 382116 . - 0 ID=cds-WP_000084401.1;Parent=gene-CCO46_RS02160;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=CCO46_RS02160;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 382232 383197 . + . ID=gene-CCO46_RS02165;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=CCO46_RS02165;old_locus_tag=CCO46_02165 NZ_NPOH01000001.1 Protein Homology CDS 382232 383197 . + 0 ID=cds-WP_001258068.1;Parent=gene-CCO46_RS02165;Dbxref=GenBank:WP_001258068.1;Name=WP_001258068.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=CCO46_RS02165;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001258068.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 383172 383900 . - . ID=gene-CCO46_RS02170;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=CCO46_RS02170;old_locus_tag=CCO46_02170 NZ_NPOH01000001.1 Protein Homology CDS 383172 383900 . - 0 ID=cds-WP_000219107.1;Parent=gene-CCO46_RS02170;Dbxref=GenBank:WP_000219107.1;Name=WP_000219107.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=CCO46_RS02170;product=murein tripeptide amidase MpaA;protein_id=WP_000219107.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 384090 385703 . + . ID=gene-CCO46_RS02175;Name=CCO46_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02175;old_locus_tag=CCO46_02175 NZ_NPOH01000001.1 Protein Homology CDS 384090 385703 . + 0 ID=cds-WP_001216553.1;Parent=gene-CCO46_RS02175;Dbxref=GenBank:WP_001216553.1;Name=WP_001216553.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=CCO46_RS02175;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216553.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 385800 386729 . - . ID=gene-CCO46_RS02180;Name=CCO46_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02180;old_locus_tag=CCO46_02180 NZ_NPOH01000001.1 Protein Homology CDS 385800 386729 . - 0 ID=cds-WP_058331455.1;Parent=gene-CCO46_RS02180;Dbxref=GenBank:WP_058331455.1;Name=WP_058331455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=CCO46_RS02180;product=aromatic alcohol reductase;protein_id=WP_058331455.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 386848 387753 . + . ID=gene-CCO46_RS02185;Name=CCO46_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02185;old_locus_tag=CCO46_02185 NZ_NPOH01000001.1 Protein Homology CDS 386848 387753 . + 0 ID=cds-WP_094887694.1;Parent=gene-CCO46_RS02185;Dbxref=GenBank:WP_094887694.1;Name=WP_094887694.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=CCO46_RS02185;product=LysR family transcriptional regulator;protein_id=WP_094887694.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 388029 388898 . + . ID=gene-CCO46_RS02190;Name=CCO46_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02190;old_locus_tag=CCO46_02190 NZ_NPOH01000001.1 Protein Homology CDS 388029 388898 . + 0 ID=cds-WP_000456775.1;Parent=gene-CCO46_RS02190;Dbxref=GenBank:WP_000456775.1;Name=WP_000456775.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=CCO46_RS02190;product=aldo/keto reductase;protein_id=WP_000456775.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 388989 389702 . - . ID=gene-CCO46_RS02195;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=CCO46_RS02195;old_locus_tag=CCO46_02195 NZ_NPOH01000001.1 Protein Homology CDS 388989 389702 . - 0 ID=cds-WP_031605281.1;Parent=gene-CCO46_RS02195;Dbxref=GenBank:WP_031605281.1;Name=WP_031605281.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=CCO46_RS02195;product=SDR family oxidoreductase;protein_id=WP_031605281.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 389780 390370 . + . ID=gene-CCO46_RS02200;Name=CCO46_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02200;old_locus_tag=CCO46_02200 NZ_NPOH01000001.1 Protein Homology CDS 389780 390370 . + 0 ID=cds-WP_000208474.1;Parent=gene-CCO46_RS02200;Dbxref=GenBank:WP_000208474.1;Name=WP_000208474.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=CCO46_RS02200;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208474.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 390499 390735 . + . ID=gene-CCO46_RS02205;Name=CCO46_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02205;old_locus_tag=CCO46_02205 NZ_NPOH01000001.1 Protein Homology CDS 390499 390735 . + 0 ID=cds-WP_001168017.1;Parent=gene-CCO46_RS02205;Dbxref=GenBank:WP_001168017.1;Name=WP_001168017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=CCO46_RS02205;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168017.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 390949 392058 . - . ID=gene-CCO46_RS02210;Name=CCO46_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02210;old_locus_tag=CCO46_02210 NZ_NPOH01000001.1 Protein Homology CDS 390949 392058 . - 0 ID=cds-WP_094887695.1;Parent=gene-CCO46_RS02210;Dbxref=GenBank:WP_094887695.1;Name=WP_094887695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=CCO46_RS02210;product=hypothetical protein;protein_id=WP_094887695.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 392450 393307 . - . ID=gene-CCO46_RS02215;Name=CCO46_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02215;old_locus_tag=CCO46_02215 NZ_NPOH01000001.1 Protein Homology CDS 392450 393307 . - 0 ID=cds-WP_078057665.1;Parent=gene-CCO46_RS02215;Dbxref=GenBank:WP_078057665.1;Name=WP_078057665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=CCO46_RS02215;product=GyrI-like domain-containing protein;protein_id=WP_078057665.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 393600 394445 . + . ID=gene-CCO46_RS02220;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=CCO46_RS02220;old_locus_tag=CCO46_02220 NZ_NPOH01000001.1 Protein Homology CDS 393600 394445 . + 0 ID=cds-WP_058331459.1;Parent=gene-CCO46_RS02220;Dbxref=GenBank:WP_058331459.1;Name=WP_058331459.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=CCO46_RS02220;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_058331459.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 394520 396502 . + . ID=gene-CCO46_RS02225;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=CCO46_RS02225;old_locus_tag=CCO46_02225 NZ_NPOH01000001.1 Protein Homology CDS 394520 396502 . + 0 ID=cds-WP_097363208.1;Parent=gene-CCO46_RS02225;Dbxref=GenBank:WP_097363208.1;Name=WP_097363208.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=CCO46_RS02225;product=two-partner secretion translocator ZirT;protein_id=WP_097363208.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 396529 397356 . + . ID=gene-CCO46_RS02230;Name=CCO46_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02230;old_locus_tag=CCO46_02230 NZ_NPOH01000001.1 Protein Homology CDS 396529 397356 . + 0 ID=cds-WP_097363209.1;Parent=gene-CCO46_RS02230;Dbxref=GenBank:WP_097363209.1;Name=WP_097363209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666973.1;locus_tag=CCO46_RS02230;product=ZirS family two-partner secretion-like system exoprotein;protein_id=WP_097363209.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 397452 398009 . + . ID=gene-CCO46_RS02235;Name=CCO46_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02235;old_locus_tag=CCO46_02235 NZ_NPOH01000001.1 Protein Homology CDS 397452 398009 . + 0 ID=cds-WP_076726641.1;Parent=gene-CCO46_RS02235;Dbxref=GenBank:WP_076726641.1;Name=WP_076726641.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=CCO46_RS02235;product=thiol peroxidase;protein_id=WP_076726641.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 398113 398451 . - . ID=gene-CCO46_RS02240;Name=CCO46_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02240;old_locus_tag=CCO46_02240 NZ_NPOH01000001.1 Protein Homology CDS 398113 398451 . - 0 ID=cds-WP_023228350.1;Parent=gene-CCO46_RS02240;Dbxref=GenBank:WP_023228350.1;Name=WP_023228350.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=CCO46_RS02240;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_023228350.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 398479 399165 . - . ID=gene-CCO46_RS02245;Name=CCO46_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02245;old_locus_tag=CCO46_02245 NZ_NPOH01000001.1 Protein Homology CDS 398479 399165 . - 0 ID=cds-WP_058331463.1;Parent=gene-CCO46_RS02245;Dbxref=GenBank:WP_058331463.1;Name=WP_058331463.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=CCO46_RS02245;product=B3/B4 domain-containing protein;protein_id=WP_058331463.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 399209 399811 . + . ID=gene-CCO46_RS02250;Name=CCO46_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02250;old_locus_tag=CCO46_02250 NZ_NPOH01000001.1 Protein Homology CDS 399209 399811 . + 0 ID=cds-WP_094887698.1;Parent=gene-CCO46_RS02250;Dbxref=GenBank:WP_094887698.1;Name=WP_094887698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=CCO46_RS02250;product=helix-turn-helix domain-containing protein;protein_id=WP_094887698.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 399897 400928 . - . ID=gene-CCO46_RS02255;Name=CCO46_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02255;old_locus_tag=CCO46_02255 NZ_NPOH01000001.1 Protein Homology CDS 399897 400928 . - 0 ID=cds-WP_063809277.1;Parent=gene-CCO46_RS02255;Dbxref=GenBank:WP_063809277.1;Name=WP_063809277.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=CCO46_RS02255;product=mechanosensitive ion channel family protein;protein_id=WP_063809277.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 401167 401421 . + . ID=gene-CCO46_RS02260;Name=CCO46_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02260;old_locus_tag=CCO46_02260 NZ_NPOH01000001.1 Protein Homology CDS 401167 401421 . + 0 ID=cds-WP_000605645.1;Parent=gene-CCO46_RS02260;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=CCO46_RS02260;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 401476 402423 . - . ID=gene-CCO46_RS02265;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=CCO46_RS02265;old_locus_tag=CCO46_02265 NZ_NPOH01000001.1 Protein Homology CDS 401476 402423 . - 0 ID=cds-WP_001262138.1;Parent=gene-CCO46_RS02265;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=CCO46_RS02265;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 402574 403326 . - . ID=gene-CCO46_RS02270;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=CCO46_RS02270;old_locus_tag=CCO46_02270 NZ_NPOH01000001.1 Protein Homology CDS 402574 403326 . - 0 ID=cds-WP_000611914.1;Parent=gene-CCO46_RS02270;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=CCO46_RS02270;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 403522 404037 . - . ID=gene-CCO46_RS02275;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=CCO46_RS02275;old_locus_tag=CCO46_02275 NZ_NPOH01000001.1 Protein Homology CDS 403522 404037 . - 0 ID=cds-WP_000945036.1;Parent=gene-CCO46_RS02275;Dbxref=GenBank:WP_000945036.1;Name=WP_000945036.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=CCO46_RS02275;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945036.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 404295 404858 . + . ID=gene-CCO46_RS02280;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=CCO46_RS02280;old_locus_tag=CCO46_02280 NZ_NPOH01000001.1 Protein Homology CDS 404295 404858 . + 0 ID=cds-WP_001046799.1;Parent=gene-CCO46_RS02280;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=CCO46_RS02280;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 405190 406344 . + . ID=gene-CCO46_RS02285;Name=CCO46_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02285;old_locus_tag=CCO46_02285 NZ_NPOH01000001.1 Protein Homology CDS 405190 406344 . + 0 ID=cds-WP_061372232.1;Parent=gene-CCO46_RS02285;Dbxref=GenBank:WP_061372232.1;Name=WP_061372232.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=CCO46_RS02285;product=methyl-accepting chemotaxis protein;protein_id=WP_061372232.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 406490 407473 . + . ID=gene-CCO46_RS02290;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=CCO46_RS02290;old_locus_tag=CCO46_02290 NZ_NPOH01000001.1 Protein Homology CDS 406490 407473 . + 0 ID=cds-WP_000387373.1;Parent=gene-CCO46_RS02290;Dbxref=GenBank:WP_000387373.1;Name=WP_000387373.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=CCO46_RS02290;product=zinc transporter ZntB;protein_id=WP_000387373.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 407749 407931 . + . ID=gene-CCO46_RS25790;Name=CCO46_RS25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25790;old_locus_tag=CCO46_02295 NZ_NPOH01000001.1 Protein Homology CDS 407749 407931 . + 0 ID=cds-WP_001670836.1;Parent=gene-CCO46_RS25790;Dbxref=GenBank:WP_001670836.1;Name=WP_001670836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048180.1;locus_tag=CCO46_RS25790;product=hypothetical protein;protein_id=WP_001670836.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 407960 409333 . + . ID=gene-CCO46_RS02300;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=CCO46_RS02300;old_locus_tag=CCO46_02300 NZ_NPOH01000001.1 Protein Homology CDS 407960 409333 . + 0 ID=cds-WP_000123688.1;Parent=gene-CCO46_RS02300;Dbxref=GenBank:WP_000123688.1;Name=WP_000123688.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=CCO46_RS02300;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123688.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 409377 410312 . - . ID=gene-CCO46_RS02305;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=CCO46_RS02305;old_locus_tag=CCO46_02305 NZ_NPOH01000001.1 Protein Homology CDS 409377 410312 . - 0 ID=cds-WP_076726631.1;Parent=gene-CCO46_RS02305;Dbxref=GenBank:WP_076726631.1;Name=WP_076726631.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=CCO46_RS02305;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_076726631.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 410418 410570 . - . ID=gene-CCO46_RS02310;Name=CCO46_RS02310;end_range=410570,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS02310;old_locus_tag=CCO46_02310;partial=true;pseudo=true NZ_NPOH01000001.1 Protein Homology CDS 410418 410570 . - 0 ID=cds-CCO46_RS02310;Parent=gene-CCO46_RS02310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=410570,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=CCO46_RS02310;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 411000 414422 . + . ID=gene-CCO46_RS02315;Name=CCO46_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02315;old_locus_tag=CCO46_02315 NZ_NPOH01000001.1 Protein Homology CDS 411000 414422 . + 0 ID=cds-WP_097363210.1;Parent=gene-CCO46_RS02315;Dbxref=GenBank:WP_097363210.1;Name=WP_097363210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=CCO46_RS02315;product=DUF4765 family protein;protein_id=WP_097363210.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 414754 415092 . + . ID=gene-CCO46_RS02325;Name=CCO46_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02325;old_locus_tag=CCO46_02325 NZ_NPOH01000001.1 Protein Homology CDS 414754 415092 . + 0 ID=cds-WP_000159237.1;Parent=gene-CCO46_RS02325;Dbxref=GenBank:WP_000159237.1;Name=WP_000159237.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=CCO46_RS02325;product=SMR family transporter;protein_id=WP_000159237.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 415145 415579 . - . ID=gene-CCO46_RS02330;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=CCO46_RS02330;old_locus_tag=CCO46_02330 NZ_NPOH01000001.1 Protein Homology CDS 415145 415579 . - 0 ID=cds-WP_001082296.1;Parent=gene-CCO46_RS02330;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=CCO46_RS02330;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 416061 419585 . - . ID=gene-CCO46_RS02340;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=pseudogene;locus_tag=CCO46_RS02340;old_locus_tag=CCO46_02340;pseudo=true NZ_NPOH01000001.1 Protein Homology CDS 416061 419585 . - 0 ID=cds-CCO46_RS02340;Parent=gene-CCO46_RS02340;Note=internal stop;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=CCO46_RS02340;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;pseudo=true;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 419646 419957 . - . ID=gene-CCO46_RS02345;Name=CCO46_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02345;old_locus_tag=CCO46_02345 NZ_NPOH01000001.1 Protein Homology CDS 419646 419957 . - 0 ID=cds-WP_031607896.1;Parent=gene-CCO46_RS02345;Dbxref=GenBank:WP_031607896.1;Name=WP_031607896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=CCO46_RS02345;product=hypothetical protein;protein_id=WP_031607896.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 419861 420127 . + . ID=gene-CCO46_RS02350;Name=CCO46_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02350;old_locus_tag=CCO46_02350 NZ_NPOH01000001.1 Protein Homology CDS 419861 420127 . + 0 ID=cds-WP_001200680.1;Parent=gene-CCO46_RS02350;Dbxref=GenBank:WP_001200680.1;Name=WP_001200680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=CCO46_RS02350;product=putative hemolysin;protein_id=WP_001200680.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 420171 420581 . - . ID=gene-CCO46_RS02355;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=CCO46_RS02355;old_locus_tag=CCO46_02355 NZ_NPOH01000001.1 Protein Homology CDS 420171 420581 . - 0 ID=cds-WP_000725242.1;Parent=gene-CCO46_RS02355;Dbxref=GenBank:WP_000725242.1;Name=WP_000725242.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=CCO46_RS02355;product=heat shock protein HslJ;protein_id=WP_000725242.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 420692 421681 . - . ID=gene-CCO46_RS02360;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=CCO46_RS02360;old_locus_tag=CCO46_02360 NZ_NPOH01000001.1 Protein Homology CDS 420692 421681 . - 0 ID=cds-WP_000762206.1;Parent=gene-CCO46_RS02360;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=CCO46_RS02360;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 421921 424557 . + . ID=gene-CCO46_RS02365;Name=CCO46_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02365;old_locus_tag=CCO46_02365 NZ_NPOH01000001.1 Protein Homology CDS 421921 424557 . + 0 ID=cds-WP_058331469.1;Parent=gene-CCO46_RS02365;Dbxref=GenBank:WP_058331469.1;Name=WP_058331469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=CCO46_RS02365;product=YdbH family protein;protein_id=WP_058331469.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 424557 424748 . + . ID=gene-CCO46_RS02370;Name=CCO46_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02370;old_locus_tag=CCO46_02370 NZ_NPOH01000001.1 Protein Homology CDS 424557 424748 . + 0 ID=cds-WP_000784063.1;Parent=gene-CCO46_RS02370;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=CCO46_RS02370;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 424756 425079 . + . ID=gene-CCO46_RS02375;Name=CCO46_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02375;old_locus_tag=CCO46_02375 NZ_NPOH01000001.1 Protein Homology CDS 424756 425079 . + 0 ID=cds-WP_000760414.1;Parent=gene-CCO46_RS02375;Dbxref=GenBank:WP_000760414.1;Name=WP_000760414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=CCO46_RS02375;product=YdbL family protein;protein_id=WP_000760414.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 425222 425671 . + . ID=gene-CCO46_RS02380;Name=CCO46_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02380;old_locus_tag=CCO46_02380 NZ_NPOH01000001.1 Protein Homology CDS 425222 425671 . + 0 ID=cds-WP_001518898.1;Parent=gene-CCO46_RS02380;Dbxref=GenBank:WP_001518898.1;Name=WP_001518898.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=CCO46_RS02380;product=GFA family protein;protein_id=WP_001518898.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 425668 426273 . - . ID=gene-CCO46_RS02385;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=CCO46_RS02385;old_locus_tag=CCO46_02385 NZ_NPOH01000001.1 Protein Homology CDS 425668 426273 . - 0 ID=cds-WP_000048924.1;Parent=gene-CCO46_RS02385;Dbxref=GenBank:WP_000048924.1;Name=WP_000048924.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=CCO46_RS02385;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048924.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 426474 430376 . + . ID=gene-CCO46_RS02390;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=CCO46_RS02390;old_locus_tag=CCO46_02390 NZ_NPOH01000001.1 Protein Homology CDS 426474 430376 . + 0 ID=cds-WP_097363221.1;Parent=gene-CCO46_RS02390;Dbxref=GenBank:WP_097363221.1;Name=WP_097363221.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=CCO46_RS02390;product=ATP-dependent RNA helicase HrpA;protein_id=WP_097363221.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 430440 431240 . + . ID=gene-CCO46_RS02395;Name=CCO46_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02395;old_locus_tag=CCO46_02395 NZ_NPOH01000001.1 Protein Homology CDS 430440 431240 . + 0 ID=cds-WP_097363211.1;Parent=gene-CCO46_RS02395;Dbxref=GenBank:WP_097363211.1;Name=WP_097363211.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=CCO46_RS02395;product=YdcF family protein;protein_id=WP_097363211.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 431357 431887 . + . ID=gene-CCO46_RS02400;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=CCO46_RS02400;old_locus_tag=CCO46_02400 NZ_NPOH01000001.1 Protein Homology CDS 431357 431887 . + 0 ID=cds-WP_000527277.1;Parent=gene-CCO46_RS02400;Dbxref=GenBank:WP_000527277.1;Name=WP_000527277.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=CCO46_RS02400;product=cytochrome b561;protein_id=WP_000527277.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 432158 432820 . - . ID=gene-CCO46_RS02405;Name=CCO46_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02405;old_locus_tag=CCO46_02405 NZ_NPOH01000001.1 Protein Homology CDS 432158 432820 . - 0 ID=cds-WP_001520112.1;Parent=gene-CCO46_RS02405;Dbxref=GenBank:WP_001520112.1;Name=WP_001520112.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=CCO46_RS02405;product=class I SAM-dependent methyltransferase;protein_id=WP_001520112.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 433776 434120 . + . ID=gene-CCO46_RS02410;Name=CCO46_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02410;old_locus_tag=CCO46_02410 NZ_NPOH01000001.1 Protein Homology CDS 433776 434120 . + 0 ID=cds-WP_097363212.1;Parent=gene-CCO46_RS02410;Dbxref=GenBank:WP_097363212.1;Name=WP_097363212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=CCO46_RS02410;product=DUF1294 domain-containing protein;protein_id=WP_097363212.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 434240 435466 . - . ID=gene-CCO46_RS02415;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=CCO46_RS02415;old_locus_tag=CCO46_02415 NZ_NPOH01000001.1 Protein Homology CDS 434240 435466 . - 0 ID=cds-WP_094964478.1;Parent=gene-CCO46_RS02415;Dbxref=GenBank:WP_094964478.1;Name=WP_094964478.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=CCO46_RS02415;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_094964478.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 435892 436608 . + . ID=gene-CCO46_RS02420;Name=CCO46_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02420;old_locus_tag=CCO46_02420 NZ_NPOH01000001.1 Protein Homology CDS 435892 436608 . + 0 ID=cds-WP_076726614.1;Parent=gene-CCO46_RS02420;Dbxref=GenBank:WP_076726614.1;Name=WP_076726614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=CCO46_RS02420;product=hypothetical protein;protein_id=WP_076726614.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 436739 437140 . - . ID=gene-CCO46_RS02425;Name=CCO46_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02425;old_locus_tag=CCO46_02425 NZ_NPOH01000001.1 Protein Homology CDS 436739 437140 . - 0 ID=cds-WP_080160226.1;Parent=gene-CCO46_RS02425;Dbxref=GenBank:WP_080160226.1;Name=WP_080160226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=CCO46_RS02425;product=effector protein;protein_id=WP_080160226.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 437664 437939 . + . ID=gene-CCO46_RS02430;Name=CCO46_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02430;old_locus_tag=CCO46_02430 NZ_NPOH01000001.1 Protein Homology CDS 437664 437939 . + 0 ID=cds-WP_001120770.1;Parent=gene-CCO46_RS02430;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=CCO46_RS02430;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 437971 439089 . + . ID=gene-CCO46_RS02435;Name=CCO46_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02435;old_locus_tag=CCO46_02435 NZ_NPOH01000001.1 Protein Homology CDS 437971 439089 . + 0 ID=cds-WP_097363213.1;Parent=gene-CCO46_RS02435;Dbxref=GenBank:WP_097363213.1;Name=WP_097363213.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=CCO46_RS02435;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_097363213.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 439258 440883 . + . ID=gene-CCO46_RS02445;Name=CCO46_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02445;old_locus_tag=CCO46_02445 NZ_NPOH01000001.1 Protein Homology CDS 439258 440883 . + 0 ID=cds-WP_097363215.1;Parent=gene-CCO46_RS02445;Dbxref=GenBank:WP_097363215.1;Name=WP_097363215.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=CCO46_RS02445;product=methyl-accepting chemotaxis protein;protein_id=WP_097363215.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 440944 441867 . - . ID=gene-CCO46_RS02450;Name=CCO46_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02450;old_locus_tag=CCO46_02450 NZ_NPOH01000001.1 Protein Homology CDS 440944 441867 . - 0 ID=cds-WP_000414259.1;Parent=gene-CCO46_RS02450;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=CCO46_RS02450;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 442160 443503 . + . ID=gene-CCO46_RS02455;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=CCO46_RS02455;old_locus_tag=CCO46_02455 NZ_NPOH01000001.1 Protein Homology CDS 442160 443503 . + 0 ID=cds-WP_076726612.1;Parent=gene-CCO46_RS02455;Dbxref=GenBank:WP_076726612.1;Name=WP_076726612.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=CCO46_RS02455;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_076726612.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 443552 445060 . + . ID=gene-CCO46_RS02460;Name=CCO46_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02460;old_locus_tag=CCO46_02460 NZ_NPOH01000001.1 Protein Homology CDS 443552 445060 . + 0 ID=cds-WP_000933978.1;Parent=gene-CCO46_RS02460;Dbxref=GenBank:WP_000933978.1;Name=WP_000933978.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=CCO46_RS02460;product=carboxylesterase/lipase family protein;protein_id=WP_000933978.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 445280 446935 . + . ID=gene-CCO46_RS02465;Name=CCO46_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02465;old_locus_tag=CCO46_02465 NZ_NPOH01000001.1 Protein Homology CDS 445280 446935 . + 0 ID=cds-WP_058331473.1;Parent=gene-CCO46_RS02465;Dbxref=GenBank:WP_058331473.1;Name=WP_058331473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=CCO46_RS02465;product=glucan biosynthesis protein D;protein_id=WP_058331473.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 447131 447706 . + . ID=gene-CCO46_RS02470;Name=CCO46_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02470;old_locus_tag=CCO46_02470 NZ_NPOH01000001.1 Protein Homology CDS 447131 447706 . + 0 ID=cds-WP_097363216.1;Parent=gene-CCO46_RS02470;Dbxref=GenBank:WP_097363216.1;Name=WP_097363216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=CCO46_RS02470;product=YceI family protein;protein_id=WP_097363216.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 447884 448603 . - . ID=gene-CCO46_RS02475;Name=CCO46_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02475;old_locus_tag=CCO46_02475 NZ_NPOH01000001.1 Protein Homology CDS 447884 448603 . - 0 ID=cds-WP_000023780.1;Parent=gene-CCO46_RS02475;Dbxref=GenBank:WP_000023780.1;Name=WP_000023780.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023780.1;locus_tag=CCO46_RS02475;product=FadR/GntR family transcriptional regulator;protein_id=WP_000023780.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 448694 449785 . - . ID=gene-CCO46_RS02480;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=CCO46_RS02480;old_locus_tag=CCO46_02480 NZ_NPOH01000001.1 Protein Homology CDS 448694 449785 . - 0 ID=cds-WP_001131637.1;Parent=gene-CCO46_RS02480;Dbxref=GenBank:WP_001131637.1;Name=WP_001131637.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131634.1;locus_tag=CCO46_RS02480;product=L-idonate 5-dehydrogenase;protein_id=WP_001131637.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 449754 451115 . - . ID=gene-CCO46_RS02485;Name=CCO46_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02485;old_locus_tag=CCO46_02485 NZ_NPOH01000001.1 Protein Homology CDS 449754 451115 . - 0 ID=cds-WP_000648129.1;Parent=gene-CCO46_RS02485;Dbxref=GenBank:WP_000648129.1;Name=WP_000648129.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=CCO46_RS02485;product=MFS transporter;protein_id=WP_000648129.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 451199 451966 . - . ID=gene-CCO46_RS02490;Name=CCO46_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02490;old_locus_tag=CCO46_02490 NZ_NPOH01000001.1 Protein Homology CDS 451199 451966 . - 0 ID=cds-WP_000125686.1;Parent=gene-CCO46_RS02490;Dbxref=GenBank:WP_000125686.1;Name=WP_000125686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=CCO46_RS02490;product=SDR family oxidoreductase;protein_id=WP_000125686.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 452304 453557 . + . ID=gene-CCO46_RS02495;Name=CCO46_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02495;old_locus_tag=CCO46_02495 NZ_NPOH01000001.1 Protein Homology CDS 452304 453557 . + 0 ID=cds-WP_000067287.1;Parent=gene-CCO46_RS02495;Dbxref=GenBank:WP_000067287.1;Name=WP_000067287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=CCO46_RS02495;product=enolase C-terminal domain-like protein;protein_id=WP_000067287.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 453698 454135 . - . ID=gene-CCO46_RS02500;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=CCO46_RS02500;old_locus_tag=CCO46_02500 NZ_NPOH01000001.1 Protein Homology CDS 453698 454135 . - 0 ID=cds-WP_000354868.1;Parent=gene-CCO46_RS02500;Dbxref=GenBank:WP_000354868.1;Name=WP_000354868.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=CCO46_RS02500;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_000354868.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 454135 454926 . - . ID=gene-CCO46_RS02505;Name=CCO46_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02505;old_locus_tag=CCO46_02505 NZ_NPOH01000001.1 Protein Homology CDS 454135 454926 . - 0 ID=cds-WP_001670738.1;Parent=gene-CCO46_RS02505;Dbxref=GenBank:WP_001670738.1;Name=WP_001670738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=CCO46_RS02505;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001670738.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 454942 455574 . - . ID=gene-CCO46_RS02510;Name=CCO46_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02510;old_locus_tag=CCO46_02510 NZ_NPOH01000001.1 Protein Homology CDS 454942 455574 . - 0 ID=cds-WP_000600620.1;Parent=gene-CCO46_RS02510;Dbxref=GenBank:WP_000600620.1;Name=WP_000600620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=CCO46_RS02510;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600620.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 455586 456023 . - . ID=gene-CCO46_RS02515;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=CCO46_RS02515;old_locus_tag=CCO46_02515 NZ_NPOH01000001.1 Protein Homology CDS 455586 456023 . - 0 ID=cds-WP_000606458.1;Parent=gene-CCO46_RS02515;Dbxref=GenBank:WP_000606458.1;Name=WP_000606458.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=CCO46_RS02515;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606458.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 456155 456961 . - . ID=gene-CCO46_RS02520;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=CCO46_RS02520;old_locus_tag=CCO46_02520 NZ_NPOH01000001.1 Protein Homology CDS 456155 456961 . - 0 ID=cds-WP_000118619.1;Parent=gene-CCO46_RS02520;Dbxref=GenBank:WP_000118619.1;Name=WP_000118619.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=CCO46_RS02520;product=BtpA family protein SgcQ;protein_id=WP_000118619.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 456975 458288 . - . ID=gene-CCO46_RS02525;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=CCO46_RS02525;old_locus_tag=CCO46_02525 NZ_NPOH01000001.1 Protein Homology CDS 456975 458288 . - 0 ID=cds-WP_000460835.1;Parent=gene-CCO46_RS02525;Dbxref=GenBank:WP_000460835.1;Name=WP_000460835.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=CCO46_RS02525;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_000460835.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 458299 458580 . - . ID=gene-CCO46_RS02530;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=CCO46_RS02530;old_locus_tag=CCO46_02530 NZ_NPOH01000001.1 Protein Homology CDS 458299 458580 . - 0 ID=cds-WP_000976132.1;Parent=gene-CCO46_RS02530;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=CCO46_RS02530;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 458577 459695 . - . ID=gene-CCO46_RS02535;Name=CCO46_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02535;old_locus_tag=CCO46_02535 NZ_NPOH01000001.1 Protein Homology CDS 458577 459695 . - 0 ID=cds-WP_094887701.1;Parent=gene-CCO46_RS02535;Dbxref=GenBank:WP_094887701.1;Name=WP_094887701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=CCO46_RS02535;product=M42 family metallopeptidase;protein_id=WP_094887701.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 459912 460451 . + . ID=gene-CCO46_RS02540;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=CCO46_RS02540;old_locus_tag=CCO46_02540 NZ_NPOH01000001.1 Protein Homology CDS 459912 460451 . + 0 ID=cds-WP_000229311.1;Parent=gene-CCO46_RS02540;Dbxref=GenBank:WP_000229311.1;Name=WP_000229311.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=CCO46_RS02540;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229311.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 460448 461428 . - . ID=gene-CCO46_RS02545;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=CCO46_RS02545;old_locus_tag=CCO46_02545 NZ_NPOH01000001.1 Protein Homology CDS 460448 461428 . - 0 ID=cds-WP_000170584.1;Parent=gene-CCO46_RS02545;Dbxref=GenBank:WP_000170584.1;Name=WP_000170584.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=CCO46_RS02545;product=YdcK family protein;protein_id=WP_000170584.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 461535 462548 . + . ID=gene-CCO46_RS02550;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=CCO46_RS02550;old_locus_tag=CCO46_02550 NZ_NPOH01000001.1 Protein Homology CDS 461535 462548 . + 0 ID=cds-WP_001243996.1;Parent=gene-CCO46_RS02550;Dbxref=GenBank:WP_001243996.1;Name=WP_001243996.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=CCO46_RS02550;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001243996.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 462535 463131 . + . ID=gene-CCO46_RS02555;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=CCO46_RS02555;old_locus_tag=CCO46_02555 NZ_NPOH01000001.1 Protein Homology CDS 462535 463131 . + 0 ID=cds-WP_000218277.1;Parent=gene-CCO46_RS02555;Dbxref=GenBank:WP_000218277.1;Name=WP_000218277.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=CCO46_RS02555;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218277.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 463287 463955 . + . ID=gene-CCO46_RS02560;Name=CCO46_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02560;old_locus_tag=CCO46_02560 NZ_NPOH01000001.1 Protein Homology CDS 463287 463955 . + 0 ID=cds-WP_001259025.1;Parent=gene-CCO46_RS02560;Dbxref=GenBank:WP_001259025.1;Name=WP_001259025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=CCO46_RS02560;product=DUF3313 domain-containing protein;protein_id=WP_001259025.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 464009 465187 . - . ID=gene-CCO46_RS02565;Name=CCO46_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02565;old_locus_tag=CCO46_02565 NZ_NPOH01000001.1 Protein Homology CDS 464009 465187 . - 0 ID=cds-WP_061372440.1;Parent=gene-CCO46_RS02565;Dbxref=GenBank:WP_061372440.1;Name=WP_061372440.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=CCO46_RS02565;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_061372440.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 465280 465816 . + . ID=gene-CCO46_RS02570;Name=CCO46_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02570;old_locus_tag=CCO46_02570 NZ_NPOH01000001.1 Protein Homology CDS 465280 465816 . + 0 ID=cds-WP_000369536.1;Parent=gene-CCO46_RS02570;Dbxref=GenBank:WP_000369536.1;Name=WP_000369536.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=CCO46_RS02570;product=helix-turn-helix domain-containing protein;protein_id=WP_000369536.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 465895 467859 . + . ID=gene-CCO46_RS02575;Name=CCO46_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02575;old_locus_tag=CCO46_02575 NZ_NPOH01000001.1 Protein Homology CDS 465895 467859 . + 0 ID=cds-WP_001249753.1;Parent=gene-CCO46_RS02575;Dbxref=GenBank:WP_001249753.1;Name=WP_001249753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=CCO46_RS02575;product=peptidase U32 family protein;protein_id=WP_001249753.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 467860 468090 . - . ID=gene-CCO46_RS02580;Name=CCO46_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02580;old_locus_tag=CCO46_02580 NZ_NPOH01000001.1 Protein Homology CDS 467860 468090 . - 0 ID=cds-WP_001537894.1;Parent=gene-CCO46_RS02580;Dbxref=GenBank:WP_001537894.1;Name=WP_001537894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=CCO46_RS02580;product=YncJ family protein;protein_id=WP_001537894.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 469363 470211 . - . ID=gene-CCO46_RS02585;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=CCO46_RS02585;old_locus_tag=CCO46_02585 NZ_NPOH01000001.1 Protein Homology CDS 469363 470211 . - 0 ID=cds-WP_094887702.1;Parent=gene-CCO46_RS02585;Dbxref=GenBank:WP_094887702.1;Name=WP_094887702.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001123158.1;locus_tag=CCO46_RS02585;product=SPI-2 type III secretion system effector PipB;protein_id=WP_094887702.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 470315 471448 . - . ID=gene-CCO46_RS02590;Name=CCO46_RS02590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS02590;old_locus_tag=CCO46_02590;partial=true;pseudo=true;start_range=.,470315 NZ_NPOH01000001.1 Protein Homology CDS 470315 471448 . - 0 ID=cds-CCO46_RS02590;Parent=gene-CCO46_RS02590;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=CCO46_RS02590;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,470315;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 473420 474190 . + . ID=gene-CCO46_RS02600;Name=CCO46_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02600;old_locus_tag=CCO46_02600 NZ_NPOH01000001.1 Protein Homology CDS 473420 474190 . + 0 ID=cds-WP_094887703.1;Parent=gene-CCO46_RS02600;Dbxref=GenBank:WP_094887703.1;Name=WP_094887703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=CCO46_RS02600;product=M15 family metallopeptidase;protein_id=WP_094887703.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 474326 475750 . + . ID=gene-CCO46_RS02605;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=CCO46_RS02605;old_locus_tag=CCO46_02605 NZ_NPOH01000001.1 Protein Homology CDS 474326 475750 . + 0 ID=cds-WP_058331484.1;Parent=gene-CCO46_RS02605;Dbxref=GenBank:WP_058331484.1;Name=WP_058331484.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=CCO46_RS02605;product=GntR family transcriptional regulator YdcR;protein_id=WP_058331484.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 475865 477310 . + . ID=gene-CCO46_RS02610;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=CCO46_RS02610;old_locus_tag=CCO46_02610 NZ_NPOH01000001.1 Protein Homology CDS 475865 477310 . + 0 ID=cds-WP_000158098.1;Parent=gene-CCO46_RS02610;Dbxref=GenBank:WP_000158098.1;Name=WP_000158098.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=CCO46_RS02610;product=aminobutyraldehyde dehydrogenase;protein_id=WP_000158098.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 477415 477510 . - . ID=gene-CCO46_RS02615;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=CCO46_RS02615;old_locus_tag=CCO46_02615 NZ_NPOH01000001.1 Protein Homology CDS 477415 477510 . - 0 ID=cds-WP_001103198.1;Parent=gene-CCO46_RS02615;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=CCO46_RS02615;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 477709 477882 . + . ID=gene-CCO46_RS02620;Name=CCO46_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02620;old_locus_tag=CCO46_02620 NZ_NPOH01000001.1 Protein Homology CDS 477709 477882 . + 0 ID=cds-WP_001522647.1;Parent=gene-CCO46_RS02620;Dbxref=GenBank:WP_001522647.1;Name=WP_001522647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=CCO46_RS02620;product=GhoT/OrtT family toxin;protein_id=WP_001522647.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 477927 480071 . - . ID=gene-CCO46_RS02625;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=CCO46_RS02625;old_locus_tag=CCO46_02625 NZ_NPOH01000001.1 Protein Homology CDS 477927 480071 . - 0 ID=cds-WP_094887704.1;Parent=gene-CCO46_RS02625;Dbxref=GenBank:WP_094887704.1;Name=WP_094887704.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=CCO46_RS02625;product=virulence-associated effector SrfC;protein_id=WP_094887704.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 480068 483049 . - . ID=gene-CCO46_RS02630;Name=CCO46_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02630;old_locus_tag=CCO46_02630 NZ_NPOH01000001.1 Protein Homology CDS 480068 483049 . - 0 ID=cds-WP_080160411.1;Parent=gene-CCO46_RS02630;Dbxref=GenBank:WP_080160411.1;Name=WP_080160411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=CCO46_RS02630;product=virulence factor SrfB;protein_id=WP_080160411.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 483054 484379 . - . ID=gene-CCO46_RS02635;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=CCO46_RS02635;old_locus_tag=CCO46_02635 NZ_NPOH01000001.1 Protein Homology CDS 483054 484379 . - 0 ID=cds-WP_061372444.1;Parent=gene-CCO46_RS02635;Dbxref=GenBank:WP_061372444.1;Name=WP_061372444.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=CCO46_RS02635;product=virulence-associated effector SrfA;protein_id=WP_061372444.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 484603 484836 . + . ID=gene-CCO46_RS02640;Name=CCO46_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02640;old_locus_tag=CCO46_02640 NZ_NPOH01000001.1 Protein Homology CDS 484603 484836 . + 0 ID=cds-WP_000018720.1;Parent=gene-CCO46_RS02640;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=CCO46_RS02640;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 484841 485290 . - . ID=gene-CCO46_RS02645;Name=CCO46_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02645;old_locus_tag=CCO46_02645 NZ_NPOH01000001.1 Protein Homology CDS 484841 485290 . - 0 ID=cds-WP_001076571.1;Parent=gene-CCO46_RS02645;Dbxref=GenBank:WP_001076571.1;Name=WP_001076571.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=CCO46_RS02645;product=DMT family transporter;protein_id=WP_001076571.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 485290 485805 . - . ID=gene-CCO46_RS02650;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=CCO46_RS02650;old_locus_tag=CCO46_02650 NZ_NPOH01000001.1 Protein Homology CDS 485290 485805 . - 0 ID=cds-WP_000155373.1;Parent=gene-CCO46_RS02650;Dbxref=GenBank:WP_000155373.1;Name=WP_000155373.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=CCO46_RS02650;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000155373.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 486017 487054 . + . ID=gene-CCO46_RS02655;Name=CCO46_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02655;old_locus_tag=CCO46_02655 NZ_NPOH01000001.1 Protein Homology CDS 486017 487054 . + 0 ID=cds-WP_017465903.1;Parent=gene-CCO46_RS02655;Dbxref=GenBank:WP_017465903.1;Name=WP_017465903.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=CCO46_RS02655;product=NADP-dependent oxidoreductase;protein_id=WP_017465903.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 487388 488053 . + . ID=gene-CCO46_RS02660;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=CCO46_RS02660;old_locus_tag=CCO46_02660 NZ_NPOH01000001.1 Protein Homology CDS 487388 488053 . + 0 ID=cds-WP_058331487.1;Parent=gene-CCO46_RS02660;Dbxref=GenBank:WP_058331487.1;Name=WP_058331487.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=CCO46_RS02660;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_058331487.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 488109 490229 . - . ID=gene-CCO46_RS02665;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=CCO46_RS02665;old_locus_tag=CCO46_02665 NZ_NPOH01000001.1 Protein Homology CDS 488109 490229 . - 0 ID=cds-WP_097363217.1;Parent=gene-CCO46_RS02665;Dbxref=GenBank:WP_097363217.1;Name=WP_097363217.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=CCO46_RS02665;product=TonB-dependent receptor PqqU;protein_id=WP_097363217.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 490493 491554 . + . ID=gene-CCO46_RS02670;Name=CCO46_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02670;old_locus_tag=CCO46_02670 NZ_NPOH01000001.1 Protein Homology CDS 490493 491554 . + 0 ID=cds-WP_000550642.1;Parent=gene-CCO46_RS02670;Dbxref=GenBank:WP_000550642.1;Name=WP_000550642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=CCO46_RS02670;product=YncE family protein;protein_id=WP_000550642.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 491699 491920 . + . ID=gene-CCO46_RS02675;Name=CCO46_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02675;old_locus_tag=CCO46_02675 NZ_NPOH01000001.1 Protein Homology CDS 491699 491920 . + 0 ID=cds-WP_000732362.1;Parent=gene-CCO46_RS02675;Dbxref=GenBank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=CCO46_RS02675;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 491997 493490 . - . ID=gene-CCO46_RS02680;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=CCO46_RS02680;old_locus_tag=CCO46_02680 NZ_NPOH01000001.1 Protein Homology CDS 491997 493490 . - 0 ID=cds-WP_058331490.1;Parent=gene-CCO46_RS02680;Dbxref=GenBank:WP_058331490.1;Name=WP_058331490.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=CCO46_RS02680;product=L-asparagine permease;protein_id=WP_058331490.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 494003 494635 . + . ID=gene-CCO46_RS02685;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=CCO46_RS02685;old_locus_tag=CCO46_02685 NZ_NPOH01000001.1 Protein Homology CDS 494003 494635 . + 0 ID=cds-WP_058331491.1;Parent=gene-CCO46_RS02685;Dbxref=GenBank:WP_058331491.1;Name=WP_058331491.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=CCO46_RS02685;product=type III secretion system effector SteA;protein_id=WP_058331491.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 494919 495764 . + . ID=gene-CCO46_RS02695;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=CCO46_RS02695;old_locus_tag=CCO46_02695 NZ_NPOH01000001.1 Protein Homology CDS 494919 495764 . + 0 ID=cds-WP_058331492.1;Parent=gene-CCO46_RS02695;Dbxref=GenBank:WP_058331492.1;Name=WP_058331492.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=CCO46_RS02695;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_058331492.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 495800 496693 . - . ID=gene-CCO46_RS02700;Name=CCO46_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02700;old_locus_tag=CCO46_02700 NZ_NPOH01000001.1 Protein Homology CDS 495800 496693 . - 0 ID=cds-WP_058331493.1;Parent=gene-CCO46_RS02700;Dbxref=GenBank:WP_058331493.1;Name=WP_058331493.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=CCO46_RS02700;product=PhzF family isomerase;protein_id=WP_058331493.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 496798 497478 . - . ID=gene-CCO46_RS02705;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO46_RS02705;old_locus_tag=CCO46_02705 NZ_NPOH01000001.1 Protein Homology CDS 496798 497478 . - 0 ID=cds-WP_000617103.1;Parent=gene-CCO46_RS02705;Dbxref=GenBank:WP_000617103.1;Name=WP_000617103.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=CCO46_RS02705;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617103.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 497475 498170 . - . ID=gene-CCO46_RS02710;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=CCO46_RS02710;old_locus_tag=CCO46_02710 NZ_NPOH01000001.1 Protein Homology CDS 497475 498170 . - 0 ID=cds-WP_023214604.1;Parent=gene-CCO46_RS02710;Dbxref=GenBank:WP_023214604.1;Name=WP_023214604.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=CCO46_RS02710;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_023214604.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 498170 499714 . - . ID=gene-CCO46_RS02715;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO46_RS02715;old_locus_tag=CCO46_02715 NZ_NPOH01000001.1 Protein Homology CDS 498170 499714 . - 0 ID=cds-WP_000702591.1;Parent=gene-CCO46_RS02715;Dbxref=GenBank:WP_000702591.1;Name=WP_000702591.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=CCO46_RS02715;product=nitrate reductase subunit beta;protein_id=WP_000702591.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 499711 503451 . - . ID=gene-CCO46_RS02720;Name=CCO46_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02720;old_locus_tag=CCO46_02720 NZ_NPOH01000001.1 Protein Homology CDS 499711 503451 . - 0 ID=cds-WP_076726573.1;Parent=gene-CCO46_RS02720;Dbxref=GenBank:WP_076726573.1;Name=WP_076726573.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=CCO46_RS02720;product=nitrate reductase subunit alpha;protein_id=WP_076726573.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 503543 504931 . - . ID=gene-CCO46_RS02725;Name=CCO46_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02725;old_locus_tag=CCO46_02725 NZ_NPOH01000001.1 Protein Homology CDS 503543 504931 . - 0 ID=cds-WP_058331494.1;Parent=gene-CCO46_RS02725;Dbxref=GenBank:WP_058331494.1;Name=WP_058331494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=CCO46_RS02725;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_058331494.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 505145 505723 . - . ID=gene-CCO46_RS02730;Name=CCO46_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02730;old_locus_tag=CCO46_02730 NZ_NPOH01000001.1 Protein Homology CDS 505145 505723 . - 0 ID=cds-WP_058331495.1;Parent=gene-CCO46_RS02730;Dbxref=GenBank:WP_058331495.1;Name=WP_058331495.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=CCO46_RS02730;product=TetR family transcriptional regulator;protein_id=WP_058331495.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 505841 507328 . + . ID=gene-CCO46_RS02735;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=CCO46_RS02735;old_locus_tag=CCO46_02735 NZ_NPOH01000001.1 Protein Homology CDS 505841 507328 . + 0 ID=cds-WP_000489731.1;Parent=gene-CCO46_RS02735;Dbxref=GenBank:WP_000489731.1;Name=WP_000489731.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=CCO46_RS02735;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489731.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 507353 507733 . - . ID=gene-CCO46_RS02740;Name=CCO46_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02740;old_locus_tag=CCO46_02740 NZ_NPOH01000001.1 Protein Homology CDS 507353 507733 . - 0 ID=cds-WP_014343841.1;Parent=gene-CCO46_RS02740;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=CCO46_RS02740;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 507877 508965 . - . ID=gene-CCO46_RS02745;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=CCO46_RS02745;old_locus_tag=CCO46_02745 NZ_NPOH01000001.1 Protein Homology CDS 507877 508965 . - 0 ID=cds-WP_000769037.1;Parent=gene-CCO46_RS02745;Dbxref=GenBank:WP_000769037.1;Name=WP_000769037.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=CCO46_RS02745;product=porin OmpD;protein_id=WP_000769037.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 509488 510369 . - . ID=gene-CCO46_RS02755;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=CCO46_RS02755;old_locus_tag=CCO46_02755 NZ_NPOH01000001.1 Protein Homology CDS 509488 510369 . - 0 ID=cds-WP_000203795.1;Parent=gene-CCO46_RS02755;Dbxref=GenBank:WP_000203795.1;Name=WP_000203795.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=CCO46_RS02755;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000203795.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 510648 513695 . + . ID=gene-CCO46_RS02765;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO46_RS02765;old_locus_tag=CCO46_02765 NZ_NPOH01000001.1 Protein Homology CDS 510648 513695 . + 0 ID=cds-WP_140439308.1;Parent=gene-CCO46_RS02765;Dbxref=GenBank:WP_140439308.1;Name=WP_140439308.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=CCO46_RS02765;product=formate dehydrogenase-N subunit alpha;protein_id=WP_140439308.1;transl_except=(pos:511233..511235%2Caa:Sec);transl_table=11 NZ_NPOH01000001.1 RefSeq gene 513709 514593 . + . ID=gene-CCO46_RS02770;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO46_RS02770;old_locus_tag=CCO46_02770 NZ_NPOH01000001.1 Protein Homology CDS 513709 514593 . + 0 ID=cds-WP_061372448.1;Parent=gene-CCO46_RS02770;Dbxref=GenBank:WP_061372448.1;Name=WP_061372448.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=CCO46_RS02770;product=formate dehydrogenase subunit beta;protein_id=WP_061372448.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 514586 515242 . + . ID=gene-CCO46_RS02775;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=CCO46_RS02775;old_locus_tag=CCO46_02775 NZ_NPOH01000001.1 Protein Homology CDS 514586 515242 . + 0 ID=cds-WP_000045658.1;Parent=gene-CCO46_RS02775;Dbxref=GenBank:WP_000045658.1;Name=WP_000045658.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=CCO46_RS02775;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045658.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 515341 516351 . - . ID=gene-CCO46_RS02780;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=CCO46_RS02780;old_locus_tag=CCO46_02780 NZ_NPOH01000001.1 Protein Homology CDS 515341 516351 . - 0 ID=cds-WP_000642446.1;Parent=gene-CCO46_RS02780;Dbxref=GenBank:WP_000642446.1;Name=WP_000642446.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=CCO46_RS02780;product=alcohol dehydrogenase AdhP;protein_id=WP_000642446.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 516637 518334 . - . ID=gene-CCO46_RS02785;Name=CCO46_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02785;old_locus_tag=CCO46_02785 NZ_NPOH01000001.1 Protein Homology CDS 516637 518334 . - 0 ID=cds-WP_023202472.1;Parent=gene-CCO46_RS02785;Dbxref=GenBank:WP_023202472.1;Name=WP_023202472.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=CCO46_RS02785;product=NAD-dependent malic enzyme;protein_id=WP_023202472.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 518511 518654 . - . ID=gene-CCO46_RS02790;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=CCO46_RS02790;old_locus_tag=CCO46_02790 NZ_NPOH01000001.1 Protein Homology CDS 518511 518654 . - 0 ID=cds-WP_000841559.1;Parent=gene-CCO46_RS02790;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=CCO46_RS02790;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 518749 518964 . - . ID=gene-CCO46_RS02795;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=CCO46_RS02795;old_locus_tag=CCO46_02795 NZ_NPOH01000001.1 Protein Homology CDS 518749 518964 . - 0 ID=cds-WP_000495700.1;Parent=gene-CCO46_RS02795;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=CCO46_RS02795;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 519475 519906 . + . ID=gene-CCO46_RS02800;Name=CCO46_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02800;old_locus_tag=CCO46_02800 NZ_NPOH01000001.1 Protein Homology CDS 519475 519906 . + 0 ID=cds-WP_023218048.1;Parent=gene-CCO46_RS02800;Dbxref=GenBank:WP_023218048.1;Name=WP_023218048.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=CCO46_RS02800;product=OsmC family protein;protein_id=WP_023218048.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 520027 520938 . - . ID=gene-CCO46_RS02805;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=CCO46_RS02805;old_locus_tag=CCO46_02805 NZ_NPOH01000001.1 Protein Homology CDS 520027 520938 . - 0 ID=cds-WP_058331496.1;Parent=gene-CCO46_RS02805;Dbxref=GenBank:WP_058331496.1;Name=WP_058331496.1;gbkey=CDS;gene=hlyE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=CCO46_RS02805;product=hemolysin HlyE;protein_id=WP_058331496.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 521073 521708 . - . ID=gene-CCO46_RS02810;Name=CCO46_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02810;old_locus_tag=CCO46_02810 NZ_NPOH01000001.1 Protein Homology CDS 521073 521708 . - 0 ID=cds-WP_076726566.1;Parent=gene-CCO46_RS02810;Dbxref=GenBank:WP_076726566.1;Name=WP_076726566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778346.1;locus_tag=CCO46_RS02810;product=hypothetical protein;protein_id=WP_076726566.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 522477 522806 . + . ID=gene-CCO46_RS02820;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=CCO46_RS02820;old_locus_tag=CCO46_02820 NZ_NPOH01000001.1 Protein Homology CDS 522477 522806 . + 0 ID=cds-WP_001032161.1;Parent=gene-CCO46_RS02820;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=CCO46_RS02820;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 522949 523734 . + . ID=gene-CCO46_RS02825;Name=CCO46_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02825;old_locus_tag=CCO46_02825 NZ_NPOH01000001.1 Protein Homology CDS 522949 523734 . + 0 ID=cds-WP_058331498.1;Parent=gene-CCO46_RS02825;Dbxref=GenBank:WP_058331498.1;Name=WP_058331498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=CCO46_RS02825;product=OBAP family protein;protein_id=WP_058331498.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 523863 525647 . + . ID=gene-CCO46_RS02830;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=CCO46_RS02830;old_locus_tag=CCO46_02830 NZ_NPOH01000001.1 Protein Homology CDS 523863 525647 . + 0 ID=cds-WP_058331499.1;Parent=gene-CCO46_RS02830;Dbxref=GenBank:WP_058331499.1;Name=WP_058331499.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=CCO46_RS02830;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_058331499.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 525644 528172 . + . ID=gene-CCO46_RS02835;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=CCO46_RS02835;old_locus_tag=CCO46_02835 NZ_NPOH01000001.1 Protein Homology CDS 525644 528172 . + 0 ID=cds-WP_058331500.1;Parent=gene-CCO46_RS02835;Dbxref=GenBank:WP_058331500.1;Name=WP_058331500.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=CCO46_RS02835;product=malto-oligosyltrehalose synthase;protein_id=WP_058331500.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 528229 530304 . + . ID=gene-CCO46_RS02840;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO46_RS02840;old_locus_tag=CCO46_02840 NZ_NPOH01000001.1 Protein Homology CDS 528229 530304 . + 0 ID=cds-WP_000210582.1;Parent=gene-CCO46_RS02840;Dbxref=GenBank:WP_000210582.1;Name=WP_000210582.1;Ontology_term=GO:0005980,GO:0004133,GO:0004553;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=CCO46_RS02840;product=glycogen debranching protein GlgX;protein_id=WP_000210582.1;transl_table=11 NZ_NPOH01000001.1 RefSeq pseudogene 530352 530510 . - . ID=gene-CCO46_RS25370;Name=CCO46_RS25370;end_range=530510,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25370;partial=true;pseudo=true NZ_NPOH01000001.1 Protein Homology CDS 530352 530510 . - 0 ID=cds-CCO46_RS25370;Parent=gene-CCO46_RS25370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=530510,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226988.1;locus_tag=CCO46_RS25370;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 530627 530959 . + . ID=gene-CCO46_RS02845;Name=CCO46_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02845;old_locus_tag=CCO46_02845 NZ_NPOH01000001.1 GeneMarkS-2+ CDS 530627 530959 . + 0 ID=cds-WP_058331501.1;Parent=gene-CCO46_RS02845;Dbxref=GenBank:WP_058331501.1;Name=WP_058331501.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS02845;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_058331501.1;transl_table=11 NZ_NPOH01000001.1 RefSeq gene 530946 531260 . + . ID=gene-CCO46_RS02850;Name=CCO46_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02850;old_locus_tag=CCO46_02850 NZ_NPOH01000001.1 GeneMarkS-2+ CDS 530946 531260 . + 0 ID=cds-WP_058331502.1;Parent=gene-CCO46_RS02850;Dbxref=GenBank:WP_058331502.1;Name=WP_058331502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS02850;product=hypothetical protein;protein_id=WP_058331502.1;transl_table=11 ##sequence-region NZ_NPOH01000010.1 1 171201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000010.1 RefSeq region 1 171201 . + . ID=NZ_NPOH01000010.1:1..171201;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000010.1 RefSeq gene 1 5247 . + . ID=gene-CCO46_RS13160;Name=CCO46_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13160;old_locus_tag=CCO46_13165;partial=true;start_range=.,1 NZ_NPOH01000010.1 Protein Homology CDS 1 5247 . + 0 ID=cds-WP_097363357.1;Parent=gene-CCO46_RS13160;Dbxref=GenBank:WP_097363357.1;Name=WP_097363357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747946.1;locus_tag=CCO46_RS13160;partial=true;product=autotransporter domain-containing protein;protein_id=WP_097363357.1;start_range=.,1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 5440 5610 . + . ID=gene-CCO46_RS13165;Name=CCO46_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13165;old_locus_tag=CCO46_13170 NZ_NPOH01000010.1 Protein Homology CDS 5440 5610 . + 0 ID=cds-WP_000472323.1;Parent=gene-CCO46_RS13165;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=CCO46_RS13165;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 5755 6759 . - . ID=gene-CCO46_RS13170;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO46_RS13170;old_locus_tag=CCO46_13175 NZ_NPOH01000010.1 Protein Homology CDS 5755 6759 . - 0 ID=cds-WP_000165562.1;Parent=gene-CCO46_RS13170;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=CCO46_RS13170;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 6752 7510 . - . ID=gene-CCO46_RS13175;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=CCO46_RS13175;old_locus_tag=CCO46_13180 NZ_NPOH01000010.1 Protein Homology CDS 6752 7510 . - 0 ID=cds-WP_000359653.1;Parent=gene-CCO46_RS13175;Dbxref=GenBank:WP_000359653.1;Name=WP_000359653.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=CCO46_RS13175;product=phosphoglycolate phosphatase;protein_id=WP_000359653.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 7503 8180 . - . ID=gene-CCO46_RS13180;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CCO46_RS13180;old_locus_tag=CCO46_13185 NZ_NPOH01000010.1 Protein Homology CDS 7503 8180 . - 0 ID=cds-WP_000816286.1;Parent=gene-CCO46_RS13180;Dbxref=GenBank:WP_000816286.1;Name=WP_000816286.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=CCO46_RS13180;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816286.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 8198 9034 . - . ID=gene-CCO46_RS13185;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=CCO46_RS13185;old_locus_tag=CCO46_13190 NZ_NPOH01000010.1 Protein Homology CDS 8198 9034 . - 0 ID=cds-WP_000742132.1;Parent=gene-CCO46_RS13185;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=CCO46_RS13185;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 9215 10492 . - . ID=gene-CCO46_RS13190;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=CCO46_RS13190;old_locus_tag=CCO46_13195 NZ_NPOH01000010.1 Protein Homology CDS 9215 10492 . - 0 ID=cds-WP_000343147.1;Parent=gene-CCO46_RS13190;Dbxref=GenBank:WP_000343147.1;Name=WP_000343147.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=CCO46_RS13190;product=cell division protein DamX;protein_id=WP_000343147.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 10590 11678 . - . ID=gene-CCO46_RS13195;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CCO46_RS13195;old_locus_tag=CCO46_13200 NZ_NPOH01000010.1 Protein Homology CDS 10590 11678 . - 0 ID=cds-WP_000439820.1;Parent=gene-CCO46_RS13195;Dbxref=GenBank:WP_000439820.1;Name=WP_000439820.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=CCO46_RS13195;product=3-dehydroquinate synthase;protein_id=WP_000439820.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 11735 12256 . - . ID=gene-CCO46_RS13200;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=CCO46_RS13200;old_locus_tag=CCO46_13205 NZ_NPOH01000010.1 Protein Homology CDS 11735 12256 . - 0 ID=cds-WP_000818621.1;Parent=gene-CCO46_RS13200;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=CCO46_RS13200;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 12721 13959 . - . ID=gene-CCO46_RS13210;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=CCO46_RS13210;old_locus_tag=CCO46_13215 NZ_NPOH01000010.1 Protein Homology CDS 12721 13959 . - 0 ID=cds-WP_000832803.1;Parent=gene-CCO46_RS13210;Dbxref=GenBank:WP_000832803.1;Name=WP_000832803.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=CCO46_RS13210;product=DNA uptake porin HofQ;protein_id=WP_000832803.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 13874 14275 . - . ID=gene-CCO46_RS13215;Name=CCO46_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13215;old_locus_tag=CCO46_13220 NZ_NPOH01000010.1 Protein Homology CDS 13874 14275 . - 0 ID=cds-WP_000868832.1;Parent=gene-CCO46_RS13215;Dbxref=GenBank:WP_000868832.1;Name=WP_000868832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=CCO46_RS13215;product=HofP DNA utilization family protein;protein_id=WP_000868832.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 14265 14738 . - . ID=gene-CCO46_RS13220;Name=CCO46_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13220;old_locus_tag=CCO46_13225 NZ_NPOH01000010.1 Protein Homology CDS 14265 14738 . - 0 ID=cds-WP_076727293.1;Parent=gene-CCO46_RS13220;Dbxref=GenBank:WP_076727293.1;Name=WP_076727293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=CCO46_RS13220;product=hypothetical protein;protein_id=WP_076727293.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 14722 15261 . - . ID=gene-CCO46_RS13225;Name=CCO46_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13225;old_locus_tag=CCO46_13230 NZ_NPOH01000010.1 Protein Homology CDS 14722 15261 . - 0 ID=cds-WP_000951390.1;Parent=gene-CCO46_RS13225;Dbxref=GenBank:WP_000951390.1;Name=WP_000951390.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=CCO46_RS13225;product=PilN domain-containing protein;protein_id=WP_000951390.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 15261 16040 . - . ID=gene-CCO46_RS13230;Name=CCO46_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13230;old_locus_tag=CCO46_13235 NZ_NPOH01000010.1 Protein Homology CDS 15261 16040 . - 0 ID=cds-WP_000874740.1;Parent=gene-CCO46_RS13230;Dbxref=GenBank:WP_000874740.1;Name=WP_000874740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=CCO46_RS13230;product=hypothetical protein;protein_id=WP_000874740.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 16161 18713 . + . ID=gene-CCO46_RS13235;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=CCO46_RS13235;old_locus_tag=CCO46_13240 NZ_NPOH01000010.1 Protein Homology CDS 16161 18713 . + 0 ID=cds-WP_023237398.1;Parent=gene-CCO46_RS13235;Dbxref=GenBank:WP_023237398.1;Name=WP_023237398.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=CCO46_RS13235;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_023237398.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 18809 19372 . - . ID=gene-CCO46_RS13240;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=CCO46_RS13240;old_locus_tag=CCO46_13245 NZ_NPOH01000010.1 Protein Homology CDS 18809 19372 . - 0 ID=cds-WP_000045725.1;Parent=gene-CCO46_RS13240;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=CCO46_RS13240;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 19695 21827 . + . ID=gene-CCO46_RS13245;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=CCO46_RS13245;old_locus_tag=CCO46_13250 NZ_NPOH01000010.1 Protein Homology CDS 19695 21827 . + 0 ID=cds-WP_000104092.1;Parent=gene-CCO46_RS13245;Dbxref=GenBank:WP_000104092.1;Name=WP_000104092.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=CCO46_RS13245;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104092.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 21892 22560 . + . ID=gene-CCO46_RS13250;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=CCO46_RS13250;old_locus_tag=CCO46_13255 NZ_NPOH01000010.1 Protein Homology CDS 21892 22560 . + 0 ID=cds-WP_001520508.1;Parent=gene-CCO46_RS13250;Dbxref=GenBank:WP_001520508.1;Name=WP_001520508.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=CCO46_RS13250;product=GMP/IMP nucleotidase;protein_id=WP_001520508.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 22571 22972 . + . ID=gene-CCO46_RS13255;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=CCO46_RS13255;old_locus_tag=CCO46_13260 NZ_NPOH01000010.1 Protein Homology CDS 22571 22972 . + 0 ID=cds-WP_000660723.1;Parent=gene-CCO46_RS13255;Dbxref=GenBank:WP_000660723.1;Name=WP_000660723.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=CCO46_RS13255;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660723.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 22997 23875 . + . ID=gene-CCO46_RS13260;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CCO46_RS13260;old_locus_tag=CCO46_13265 NZ_NPOH01000010.1 Protein Homology CDS 22997 23875 . + 0 ID=cds-WP_001135571.1;Parent=gene-CCO46_RS13260;Dbxref=GenBank:WP_001135571.1;Name=WP_001135571.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=CCO46_RS13260;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135571.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 23973 25682 . - . ID=gene-CCO46_RS13265;Name=CCO46_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13265;old_locus_tag=CCO46_13270 NZ_NPOH01000010.1 Protein Homology CDS 23973 25682 . - 0 ID=cds-WP_097363358.1;Parent=gene-CCO46_RS13265;Dbxref=GenBank:WP_097363358.1;Name=WP_097363358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=CCO46_RS13265;product=DUF4153 domain-containing protein;protein_id=WP_097363358.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 26062 27681 . + . ID=gene-CCO46_RS13270;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CCO46_RS13270;old_locus_tag=CCO46_13275 NZ_NPOH01000010.1 Protein Homology CDS 26062 27681 . + 0 ID=cds-WP_001265689.1;Parent=gene-CCO46_RS13270;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=CCO46_RS13270;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 27756 29108 . - . ID=gene-CCO46_RS13275;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=CCO46_RS13275;old_locus_tag=CCO46_13280 NZ_NPOH01000010.1 Protein Homology CDS 27756 29108 . - 0 ID=cds-WP_001253818.1;Parent=gene-CCO46_RS13275;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=CCO46_RS13275;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 29105 29824 . - . ID=gene-CCO46_RS13280;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=CCO46_RS13280;old_locus_tag=CCO46_13285 NZ_NPOH01000010.1 Protein Homology CDS 29105 29824 . - 0 ID=cds-WP_001157751.1;Parent=gene-CCO46_RS13280;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=CCO46_RS13280;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 30050 30523 . + . ID=gene-CCO46_RS13285;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=CCO46_RS13285;old_locus_tag=CCO46_13290 NZ_NPOH01000010.1 Protein Homology CDS 30050 30523 . + 0 ID=cds-WP_000856695.1;Parent=gene-CCO46_RS13285;Dbxref=GenBank:WP_000856695.1;Name=WP_000856695.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=CCO46_RS13285;product=transcription elongation factor GreB;protein_id=WP_000856695.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 30622 32952 . + . ID=gene-CCO46_RS13290;Name=CCO46_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13290;old_locus_tag=CCO46_13295 NZ_NPOH01000010.1 Protein Homology CDS 30622 32952 . + 0 ID=cds-WP_000980662.1;Parent=gene-CCO46_RS13290;Dbxref=GenBank:WP_000980662.1;Name=WP_000980662.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=CCO46_RS13290;product=Tex family protein;protein_id=WP_000980662.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 33389 33616 . + . ID=gene-CCO46_RS13300;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=CCO46_RS13300;old_locus_tag=CCO46_13305 NZ_NPOH01000010.1 Protein Homology CDS 33389 33616 . + 0 ID=cds-WP_001160955.1;Parent=gene-CCO46_RS13300;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=CCO46_RS13300;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 33635 35953 . + . ID=gene-CCO46_RS13305;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CCO46_RS13305;old_locus_tag=CCO46_13310 NZ_NPOH01000010.1 Protein Homology CDS 33635 35953 . + 0 ID=cds-WP_023216665.1;Parent=gene-CCO46_RS13305;Dbxref=GenBank:WP_023216665.1;Name=WP_023216665.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=CCO46_RS13305;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_023216665.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 35966 36202 . + . ID=gene-CCO46_RS13310;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=CCO46_RS13310;old_locus_tag=CCO46_13315 NZ_NPOH01000010.1 Protein Homology CDS 35966 36202 . + 0 ID=cds-WP_000157587.1;Parent=gene-CCO46_RS13310;Dbxref=GenBank:WP_000157587.1;Name=WP_000157587.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=CCO46_RS13310;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157587.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 36437 37363 . + . ID=gene-CCO46_RS13315;Name=CCO46_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13315;old_locus_tag=CCO46_13320 NZ_NPOH01000010.1 Protein Homology CDS 36437 37363 . + 0 ID=cds-WP_058331615.1;Parent=gene-CCO46_RS13315;Dbxref=GenBank:WP_058331615.1;Name=WP_058331615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=CCO46_RS13315;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_058331615.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 37399 38169 . - . ID=gene-CCO46_RS13320;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=CCO46_RS13320;old_locus_tag=CCO46_13325 NZ_NPOH01000010.1 Protein Homology CDS 37399 38169 . - 0 ID=cds-WP_000998144.1;Parent=gene-CCO46_RS13320;Dbxref=GenBank:WP_000998144.1;Name=WP_000998144.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=CCO46_RS13320;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998144.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 38207 38890 . + . ID=gene-CCO46_RS13325;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=CCO46_RS13325;old_locus_tag=CCO46_13330 NZ_NPOH01000010.1 Protein Homology CDS 38207 38890 . + 0 ID=cds-WP_000958733.1;Parent=gene-CCO46_RS13325;Dbxref=GenBank:WP_000958733.1;Name=WP_000958733.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=CCO46_RS13325;product=DNA utilization protein GntX;protein_id=WP_000958733.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 38949 39524 . + . ID=gene-CCO46_RS13330;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=CCO46_RS13330;old_locus_tag=CCO46_13335 NZ_NPOH01000010.1 Protein Homology CDS 38949 39524 . + 0 ID=cds-WP_000619387.1;Parent=gene-CCO46_RS13330;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=CCO46_RS13330;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 39901 41217 . + . ID=gene-CCO46_RS13335;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=CCO46_RS13335;old_locus_tag=CCO46_13340 NZ_NPOH01000010.1 Protein Homology CDS 39901 41217 . + 0 ID=cds-WP_001131741.1;Parent=gene-CCO46_RS13335;Dbxref=GenBank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=CCO46_RS13335;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 41336 43414 . - . ID=gene-CCO46_RS13340;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=CCO46_RS13340;old_locus_tag=CCO46_13345 NZ_NPOH01000010.1 Protein Homology CDS 41336 43414 . - 0 ID=cds-WP_080160084.1;Parent=gene-CCO46_RS13340;Dbxref=GenBank:WP_080160084.1;Name=WP_080160084.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=CCO46_RS13340;product=4-alpha-glucanotransferase;protein_id=WP_080160084.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 43424 45817 . - . ID=gene-CCO46_RS13345;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=CCO46_RS13345;old_locus_tag=CCO46_13350 NZ_NPOH01000010.1 Protein Homology CDS 43424 45817 . - 0 ID=cds-WP_080108549.1;Parent=gene-CCO46_RS13345;Dbxref=GenBank:WP_080108549.1;Name=WP_080108549.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=CCO46_RS13345;product=maltodextrin phosphorylase;protein_id=WP_080108549.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 46411 49116 . + . ID=gene-CCO46_RS13350;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=CCO46_RS13350;old_locus_tag=CCO46_13355 NZ_NPOH01000010.1 Protein Homology CDS 46411 49116 . + 0 ID=cds-WP_097363359.1;Parent=gene-CCO46_RS13350;Dbxref=GenBank:WP_097363359.1;Name=WP_097363359.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=CCO46_RS13350;product=HTH-type transcriptional regulator MalT;protein_id=WP_097363359.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 49250 49810 . - . ID=gene-CCO46_RS13355;Name=CCO46_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13355;old_locus_tag=CCO46_13360 NZ_NPOH01000010.1 Protein Homology CDS 49250 49810 . - 0 ID=cds-WP_000220922.1;Parent=gene-CCO46_RS13355;Dbxref=GenBank:WP_000220922.1;Name=WP_000220922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650910.1;locus_tag=CCO46_RS13355;product=hypothetical protein;protein_id=WP_000220922.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 49807 50841 . - . ID=gene-CCO46_RS13360;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=CCO46_RS13360;old_locus_tag=CCO46_13365 NZ_NPOH01000010.1 Protein Homology CDS 49807 50841 . - 0 ID=cds-WP_000101029.1;Parent=gene-CCO46_RS13360;Dbxref=GenBank:WP_000101029.1;Name=WP_000101029.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101029.1;locus_tag=CCO46_RS13360;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_000101029.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 50845 52059 . - . ID=gene-CCO46_RS13365;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=CCO46_RS13365;old_locus_tag=CCO46_13370 NZ_NPOH01000010.1 Protein Homology CDS 50845 52059 . - 0 ID=cds-WP_001105526.1;Parent=gene-CCO46_RS13365;Dbxref=GenBank:WP_001105526.1;Name=WP_001105526.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=CCO46_RS13365;product=RNA-splicing ligase RtcB;protein_id=WP_001105526.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 52381 52497 . - . ID=gene-CCO46_RS25190;Name=CCO46_RS25190;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS25190 NZ_NPOH01000010.1 tRNAscan-SE tRNA 52381 52497 . - . ID=rna-CCO46_RS25190;Parent=gene-CCO46_RS25190;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS25190;product=tRNA-OTHER NZ_NPOH01000010.1 tRNAscan-SE exon 52381 52497 . - . ID=exon-CCO46_RS25190-1;Parent=rna-CCO46_RS25190;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS25190;product=tRNA-OTHER NZ_NPOH01000010.1 RefSeq gene 52656 54209 . - . ID=gene-CCO46_RS13370;Name=CCO46_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13370;old_locus_tag=CCO46_13375 NZ_NPOH01000010.1 Protein Homology CDS 52656 54209 . - 0 ID=cds-WP_058331611.1;Parent=gene-CCO46_RS13370;Dbxref=GenBank:WP_058331611.1;Name=WP_058331611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=CCO46_RS13370;product=vWA domain-containing protein;protein_id=WP_058331611.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 54399 55982 . + . ID=gene-CCO46_RS13375;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=CCO46_RS13375;old_locus_tag=CCO46_13380 NZ_NPOH01000010.1 Protein Homology CDS 54399 55982 . + 0 ID=cds-WP_001232874.1;Parent=gene-CCO46_RS13375;Dbxref=GenBank:WP_001232874.1;Name=WP_001232874.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=CCO46_RS13375;product=RNA repair transcriptional activator RtcR;protein_id=WP_001232874.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 55979 56737 . - . ID=gene-CCO46_RS13380;Name=CCO46_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13380;old_locus_tag=CCO46_13385 NZ_NPOH01000010.1 Protein Homology CDS 55979 56737 . - 0 ID=cds-WP_000815085.1;Parent=gene-CCO46_RS13380;Dbxref=GenBank:WP_000815085.1;Name=WP_000815085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=CCO46_RS13380;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815085.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 56831 57661 . - . ID=gene-CCO46_RS13385;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=CCO46_RS13385;old_locus_tag=CCO46_13390 NZ_NPOH01000010.1 Protein Homology CDS 56831 57661 . - 0 ID=cds-WP_000928702.1;Parent=gene-CCO46_RS13385;Dbxref=GenBank:WP_000928702.1;Name=WP_000928702.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=CCO46_RS13385;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928702.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 57737 58063 . - . ID=gene-CCO46_RS13390;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=CCO46_RS13390;old_locus_tag=CCO46_13395 NZ_NPOH01000010.1 Protein Homology CDS 57737 58063 . - 0 ID=cds-WP_000434524.1;Parent=gene-CCO46_RS13390;Dbxref=GenBank:WP_000434524.1;Name=WP_000434524.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=CCO46_RS13390;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434524.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 58262 59770 . + . ID=gene-CCO46_RS13395;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=CCO46_RS13395;old_locus_tag=CCO46_13400 NZ_NPOH01000010.1 Protein Homology CDS 58262 59770 . + 0 ID=cds-WP_000448178.1;Parent=gene-CCO46_RS13395;Dbxref=GenBank:WP_000448178.1;Name=WP_000448178.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=CCO46_RS13395;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448178.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 59817 60362 . - . ID=gene-CCO46_RS13400;Name=CCO46_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13400;old_locus_tag=CCO46_13405 NZ_NPOH01000010.1 Protein Homology CDS 59817 60362 . - 0 ID=cds-WP_000390369.1;Parent=gene-CCO46_RS13400;Dbxref=GenBank:WP_000390369.1;Name=WP_000390369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=CCO46_RS13400;product=hypothetical protein;protein_id=WP_000390369.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 60372 61865 . - . ID=gene-CCO46_RS13405;Name=CCO46_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13405;old_locus_tag=CCO46_13410 NZ_NPOH01000010.1 Protein Homology CDS 60372 61865 . - 0 ID=cds-WP_097363360.1;Parent=gene-CCO46_RS13405;Dbxref=GenBank:WP_097363360.1;Name=WP_097363360.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551775.1;locus_tag=CCO46_RS13405;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_097363360.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 61995 64442 . - . ID=gene-CCO46_RS13410;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=CCO46_RS13410;old_locus_tag=CCO46_13415 NZ_NPOH01000010.1 Protein Homology CDS 61995 64442 . - 0 ID=cds-WP_000993424.1;Parent=gene-CCO46_RS13410;Dbxref=GenBank:WP_000993424.1;Name=WP_000993424.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=CCO46_RS13410;product=glycogen phosphorylase;protein_id=WP_000993424.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 64462 65895 . - . ID=gene-CCO46_RS13415;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=CCO46_RS13415;old_locus_tag=CCO46_13420 NZ_NPOH01000010.1 Protein Homology CDS 64462 65895 . - 0 ID=cds-WP_001197674.1;Parent=gene-CCO46_RS13415;Dbxref=GenBank:WP_001197674.1;Name=WP_001197674.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=CCO46_RS13415;product=glycogen synthase GlgA;protein_id=WP_001197674.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 65895 67190 . - . ID=gene-CCO46_RS13420;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=CCO46_RS13420;old_locus_tag=CCO46_13425 NZ_NPOH01000010.1 Protein Homology CDS 65895 67190 . - 0 ID=cds-WP_000253994.1;Parent=gene-CCO46_RS13420;Dbxref=GenBank:WP_000253994.1;Name=WP_000253994.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=CCO46_RS13420;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253994.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 67205 69181 . - . ID=gene-CCO46_RS13425;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO46_RS13425;old_locus_tag=CCO46_13430 NZ_NPOH01000010.1 Protein Homology CDS 67205 69181 . - 0 ID=cds-WP_000192489.1;Parent=gene-CCO46_RS13425;Dbxref=GenBank:WP_000192489.1;Name=WP_000192489.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=CCO46_RS13425;product=glycogen debranching protein GlgX;protein_id=WP_000192489.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 69178 71364 . - . ID=gene-CCO46_RS13430;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=CCO46_RS13430;old_locus_tag=CCO46_13435 NZ_NPOH01000010.1 Protein Homology CDS 69178 71364 . - 0 ID=cds-WP_000098547.1;Parent=gene-CCO46_RS13430;Dbxref=GenBank:WP_000098547.1;Name=WP_000098547.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=CCO46_RS13430;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098547.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 71711 72817 . - . ID=gene-CCO46_RS13435;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO46_RS13435;old_locus_tag=CCO46_13440 NZ_NPOH01000010.1 Protein Homology CDS 71711 72817 . - 0 ID=cds-WP_000799937.1;Parent=gene-CCO46_RS13435;Dbxref=GenBank:WP_000799937.1;Name=WP_000799937.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=CCO46_RS13435;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799937.1;transl_table=11 NZ_NPOH01000010.1 RefSeq pseudogene 73052 73126 . + . ID=gene-CCO46_RS25870;Name=CCO46_RS25870;end_range=73126,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25870;partial=true;pseudo=true NZ_NPOH01000010.1 Protein Homology CDS 73052 73126 . + 0 ID=cds-CCO46_RS25870;Parent=gene-CCO46_RS25870;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=73126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=CCO46_RS25870;partial=true;product=MarC family protein;pseudo=true;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 73241 74581 . - . ID=gene-CCO46_RS13445;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=CCO46_RS13445;old_locus_tag=CCO46_13450 NZ_NPOH01000010.1 Protein Homology CDS 73241 74581 . - 0 ID=cds-WP_000105950.1;Parent=gene-CCO46_RS13445;Dbxref=GenBank:WP_000105950.1;Name=WP_000105950.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=CCO46_RS13445;product=gluconate transporter;protein_id=WP_000105950.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 74578 75111 . - . ID=gene-CCO46_RS13450;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CCO46_RS13450;old_locus_tag=CCO46_13455 NZ_NPOH01000010.1 Protein Homology CDS 74578 75111 . - 0 ID=cds-WP_000108342.1;Parent=gene-CCO46_RS13450;Dbxref=GenBank:WP_000108342.1;Name=WP_000108342.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=CCO46_RS13450;product=gluconokinase;protein_id=WP_000108342.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 75250 76245 . - . ID=gene-CCO46_RS13455;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=CCO46_RS13455;old_locus_tag=CCO46_13460 NZ_NPOH01000010.1 Protein Homology CDS 75250 76245 . - 0 ID=cds-WP_000730239.1;Parent=gene-CCO46_RS13455;Dbxref=GenBank:WP_000730239.1;Name=WP_000730239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=CCO46_RS13455;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 76375 77070 . - . ID=gene-CCO46_RS13460;Name=CCO46_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13460;old_locus_tag=CCO46_13465 NZ_NPOH01000010.1 Protein Homology CDS 76375 77070 . - 0 ID=cds-WP_000639789.1;Parent=gene-CCO46_RS13460;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=CCO46_RS13460;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 77194 78231 . - . ID=gene-CCO46_RS13465;Name=CCO46_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13465;old_locus_tag=CCO46_13470 NZ_NPOH01000010.1 Protein Homology CDS 77194 78231 . - 0 ID=cds-WP_094887754.1;Parent=gene-CCO46_RS13465;Dbxref=GenBank:WP_094887754.1;Name=WP_094887754.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=CCO46_RS13465;product=oxidoreductase;protein_id=WP_094887754.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 78699 79187 . + . ID=gene-CCO46_RS13470;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=CCO46_RS13470;old_locus_tag=CCO46_13475 NZ_NPOH01000010.1 Protein Homology CDS 78699 79187 . + 0 ID=cds-WP_001290286.1;Parent=gene-CCO46_RS13470;Dbxref=GenBank:WP_001290286.1;Name=WP_001290286.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=CCO46_RS13470;product=N-acetyltransferase;protein_id=WP_001290286.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 79452 80666 . + . ID=gene-CCO46_RS13475;Name=CCO46_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13475;old_locus_tag=CCO46_13480 NZ_NPOH01000010.1 Protein Homology CDS 79452 80666 . + 0 ID=cds-WP_080160088.1;Parent=gene-CCO46_RS13475;Dbxref=GenBank:WP_080160088.1;Name=WP_080160088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=CCO46_RS13475;product=PfkB family carbohydrate kinase;protein_id=WP_080160088.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 80682 81443 . + . ID=gene-CCO46_RS13480;Name=CCO46_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13480;old_locus_tag=CCO46_13485 NZ_NPOH01000010.1 Protein Homology CDS 80682 81443 . + 0 ID=cds-WP_023219537.1;Parent=gene-CCO46_RS13480;Dbxref=GenBank:WP_023219537.1;Name=WP_023219537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=CCO46_RS13480;product=glutamine amidotransferase;protein_id=WP_023219537.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 81497 82468 . + . ID=gene-CCO46_RS13485;Name=CCO46_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13485;old_locus_tag=CCO46_13490 NZ_NPOH01000010.1 Protein Homology CDS 81497 82468 . + 0 ID=cds-WP_080160089.1;Parent=gene-CCO46_RS13485;Dbxref=GenBank:WP_080160089.1;Name=WP_080160089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=CCO46_RS13485;product=DMT family transporter;protein_id=WP_080160089.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 82465 83499 . + . ID=gene-CCO46_RS13490;Name=CCO46_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13490;old_locus_tag=CCO46_13495 NZ_NPOH01000010.1 Protein Homology CDS 82465 83499 . + 0 ID=cds-WP_000675705.1;Parent=gene-CCO46_RS13490;Dbxref=GenBank:WP_000675705.1;Name=WP_000675705.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=CCO46_RS13490;product=phosphotriesterase family protein;protein_id=WP_000675705.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 83544 85286 . - . ID=gene-CCO46_RS13495;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=CCO46_RS13495;old_locus_tag=CCO46_13500 NZ_NPOH01000010.1 Protein Homology CDS 83544 85286 . - 0 ID=cds-WP_094964469.1;Parent=gene-CCO46_RS13495;Dbxref=GenBank:WP_094964469.1;Name=WP_094964469.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=CCO46_RS13495;product=gamma-glutamyltransferase;protein_id=WP_094964469.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 85412 85828 . + . ID=gene-CCO46_RS13500;Name=CCO46_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13500;old_locus_tag=CCO46_13505 NZ_NPOH01000010.1 Protein Homology CDS 85412 85828 . + 0 ID=cds-WP_000826041.1;Parent=gene-CCO46_RS13500;Dbxref=GenBank:WP_000826041.1;Name=WP_000826041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=CCO46_RS13500;product=DUF2756 family protein;protein_id=WP_000826041.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 85841 86581 . - . ID=gene-CCO46_RS13505;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=CCO46_RS13505;old_locus_tag=CCO46_13510 NZ_NPOH01000010.1 Protein Homology CDS 85841 86581 . - 0 ID=cds-WP_000073548.1;Parent=gene-CCO46_RS13505;Dbxref=GenBank:WP_000073548.1;Name=WP_000073548.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=CCO46_RS13505;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073548.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 86578 87648 . - . ID=gene-CCO46_RS13510;Name=CCO46_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13510;old_locus_tag=CCO46_13515 NZ_NPOH01000010.1 Protein Homology CDS 86578 87648 . - 0 ID=cds-WP_094964470.1;Parent=gene-CCO46_RS13510;Dbxref=GenBank:WP_094964470.1;Name=WP_094964470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=CCO46_RS13510;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_094964470.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 87650 88495 . - . ID=gene-CCO46_RS13515;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=CCO46_RS13515;old_locus_tag=CCO46_13520 NZ_NPOH01000010.1 Protein Homology CDS 87650 88495 . - 0 ID=cds-WP_000572196.1;Parent=gene-CCO46_RS13515;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=CCO46_RS13515;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 88492 89379 . - . ID=gene-CCO46_RS13520;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=CCO46_RS13520;old_locus_tag=CCO46_13525 NZ_NPOH01000010.1 Protein Homology CDS 88492 89379 . - 0 ID=cds-WP_000099303.1;Parent=gene-CCO46_RS13520;Dbxref=GenBank:WP_000099303.1;Name=WP_000099303.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=CCO46_RS13520;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099303.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 89484 90800 . - . ID=gene-CCO46_RS13525;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=CCO46_RS13525;old_locus_tag=CCO46_13530 NZ_NPOH01000010.1 Protein Homology CDS 89484 90800 . - 0 ID=cds-WP_000624747.1;Parent=gene-CCO46_RS13525;Dbxref=GenBank:WP_000624747.1;Name=WP_000624747.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=CCO46_RS13525;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624747.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 91059 91427 . - . ID=gene-CCO46_RS13530;Name=CCO46_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13530;old_locus_tag=CCO46_13535 NZ_NPOH01000010.1 Protein Homology CDS 91059 91427 . - 0 ID=cds-WP_000174964.1;Parent=gene-CCO46_RS13530;Dbxref=GenBank:WP_000174964.1;Name=WP_000174964.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=CCO46_RS13530;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_000174964.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 91424 91645 . - . ID=gene-CCO46_RS13535;Name=CCO46_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13535;old_locus_tag=CCO46_13540 NZ_NPOH01000010.1 Protein Homology CDS 91424 91645 . - 0 ID=cds-WP_001520924.1;Parent=gene-CCO46_RS13535;Dbxref=GenBank:WP_001520924.1;Name=WP_001520924.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=CCO46_RS13535;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_001520924.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 91776 92489 . - . ID=gene-CCO46_RS13540;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=CCO46_RS13540;old_locus_tag=CCO46_13545 NZ_NPOH01000010.1 Protein Homology CDS 91776 92489 . - 0 ID=cds-WP_000416114.1;Parent=gene-CCO46_RS13540;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=CCO46_RS13540;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 92491 93258 . - . ID=gene-CCO46_RS13545;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=CCO46_RS13545;old_locus_tag=CCO46_13550 NZ_NPOH01000010.1 Protein Homology CDS 92491 93258 . - 0 ID=cds-WP_058331605.1;Parent=gene-CCO46_RS13545;Dbxref=GenBank:WP_058331605.1;Name=WP_058331605.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=CCO46_RS13545;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_058331605.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 93255 94532 . - . ID=gene-CCO46_RS13550;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=CCO46_RS13550;old_locus_tag=CCO46_13555 NZ_NPOH01000010.1 Protein Homology CDS 93255 94532 . - 0 ID=cds-WP_097363361.1;Parent=gene-CCO46_RS13550;Dbxref=GenBank:WP_097363361.1;Name=WP_097363361.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=CCO46_RS13550;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_097363361.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 94529 95455 . - . ID=gene-CCO46_RS13555;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=CCO46_RS13555;old_locus_tag=CCO46_13560 NZ_NPOH01000010.1 Protein Homology CDS 94529 95455 . - 0 ID=cds-WP_000003007.1;Parent=gene-CCO46_RS13555;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=CCO46_RS13555;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 95515 96624 . - . ID=gene-CCO46_RS13560;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=CCO46_RS13560;old_locus_tag=CCO46_13565 NZ_NPOH01000010.1 Protein Homology CDS 95515 96624 . - 0 ID=cds-WP_000822976.1;Parent=gene-CCO46_RS13560;Dbxref=GenBank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=CCO46_RS13560;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 97046 97429 . + . ID=gene-CCO46_RS13565;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=CCO46_RS13565;old_locus_tag=CCO46_13570 NZ_NPOH01000010.1 Protein Homology CDS 97046 97429 . + 0 ID=cds-WP_058331604.1;Parent=gene-CCO46_RS13565;Dbxref=GenBank:WP_058331604.1;Name=WP_058331604.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=CCO46_RS13565;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_058331604.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 97414 97539 . + . ID=gene-CCO46_RS24950;Name=CCO46_RS24950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24950 NZ_NPOH01000010.1 Protein Homology CDS 97414 97539 . + 0 ID=cds-WP_011233195.1;Parent=gene-CCO46_RS24950;Dbxref=GenBank:WP_011233195.1;Name=WP_011233195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233195.1;locus_tag=CCO46_RS24950;product=hypothetical protein;protein_id=WP_011233195.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 97623 98726 . - . ID=gene-CCO46_RS13570;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=CCO46_RS13570;old_locus_tag=CCO46_13575 NZ_NPOH01000010.1 Protein Homology CDS 97623 98726 . - 0 ID=cds-WP_001747710.1;Parent=gene-CCO46_RS13570;Dbxref=GenBank:WP_001747710.1;Name=WP_001747710.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=CCO46_RS13570;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001747710.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 99048 99902 . - . ID=gene-CCO46_RS13575;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=CCO46_RS13575;old_locus_tag=CCO46_13580 NZ_NPOH01000010.1 Protein Homology CDS 99048 99902 . - 0 ID=cds-WP_000159621.1;Parent=gene-CCO46_RS13575;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=CCO46_RS13575;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 100148 101203 . - . ID=gene-CCO46_RS13580;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=CCO46_RS13580;old_locus_tag=CCO46_13585 NZ_NPOH01000010.1 Protein Homology CDS 100148 101203 . - 0 ID=cds-WP_001081707.1;Parent=gene-CCO46_RS13580;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=CCO46_RS13580;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 101196 101864 . - . ID=gene-CCO46_RS13585;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=CCO46_RS13585;old_locus_tag=CCO46_13590 NZ_NPOH01000010.1 Protein Homology CDS 101196 101864 . - 0 ID=cds-WP_000617729.1;Parent=gene-CCO46_RS13585;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=CCO46_RS13585;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 101867 103342 . - . ID=gene-CCO46_RS13590;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CCO46_RS13590;old_locus_tag=CCO46_13595 NZ_NPOH01000010.1 Protein Homology CDS 101867 103342 . - 0 ID=cds-WP_001533896.1;Parent=gene-CCO46_RS13590;Dbxref=GenBank:WP_001533896.1;Name=WP_001533896.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=CCO46_RS13590;product=signal recognition particle-docking protein FtsY;protein_id=WP_001533896.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 103468 104064 . + . ID=gene-CCO46_RS13595;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CCO46_RS13595;old_locus_tag=CCO46_13600 NZ_NPOH01000010.1 Protein Homology CDS 103468 104064 . + 0 ID=cds-WP_000743276.1;Parent=gene-CCO46_RS13595;Dbxref=GenBank:WP_000743276.1;Name=WP_000743276.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=CCO46_RS13595;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743276.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 104054 104323 . + . ID=gene-CCO46_RS13600;Name=CCO46_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13600;old_locus_tag=CCO46_13605 NZ_NPOH01000010.1 Protein Homology CDS 104054 104323 . + 0 ID=cds-WP_000906759.1;Parent=gene-CCO46_RS13600;Dbxref=GenBank:WP_000906759.1;Name=WP_000906759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=CCO46_RS13600;product=DUF1145 family protein;protein_id=WP_000906759.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 104345 104716 . - . ID=gene-CCO46_RS13605;Name=CCO46_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13605;old_locus_tag=CCO46_13610 NZ_NPOH01000010.1 Protein Homology CDS 104345 104716 . - 0 ID=cds-WP_000042851.1;Parent=gene-CCO46_RS13605;Dbxref=GenBank:WP_000042851.1;Name=WP_000042851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=CCO46_RS13605;product=DUF2500 domain-containing protein;protein_id=WP_000042851.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 104858 105484 . + . ID=gene-CCO46_RS13610;Name=CCO46_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13610;old_locus_tag=CCO46_13615 NZ_NPOH01000010.1 Protein Homology CDS 104858 105484 . + 0 ID=cds-WP_061372391.1;Parent=gene-CCO46_RS13610;Dbxref=GenBank:WP_061372391.1;Name=WP_061372391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=CCO46_RS13610;product=lysoplasmalogenase;protein_id=WP_061372391.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 105565 107763 . + . ID=gene-CCO46_RS13615;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=CCO46_RS13615;old_locus_tag=CCO46_13620 NZ_NPOH01000010.1 Protein Homology CDS 105565 107763 . + 0 ID=cds-WP_000106648.1;Parent=gene-CCO46_RS13615;Dbxref=GenBank:WP_000106648.1;Name=WP_000106648.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=CCO46_RS13615;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_000106648.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 107963 109606 . + . ID=gene-CCO46_RS13620;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=CCO46_RS13620;old_locus_tag=CCO46_13625 NZ_NPOH01000010.1 Protein Homology CDS 107963 109606 . + 0 ID=cds-WP_000789682.1;Parent=gene-CCO46_RS13620;Dbxref=GenBank:WP_000789682.1;Name=WP_000789682.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=CCO46_RS13620;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789682.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 109630 109875 . - . ID=gene-CCO46_RS13625;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=CCO46_RS13625;old_locus_tag=CCO46_13630 NZ_NPOH01000010.1 Protein Homology CDS 109630 109875 . - 0 ID=cds-WP_001541054.1;Parent=gene-CCO46_RS13625;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=CCO46_RS13625;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 110045 110710 . + . ID=gene-CCO46_RS13630;Name=CCO46_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13630;old_locus_tag=CCO46_13635 NZ_NPOH01000010.1 Protein Homology CDS 110045 110710 . + 0 ID=cds-WP_001531644.1;Parent=gene-CCO46_RS13630;Dbxref=GenBank:WP_001531644.1;Name=WP_001531644.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=CCO46_RS13630;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001531644.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 110783 111340 . + . ID=gene-CCO46_RS13635;Name=CCO46_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13635;old_locus_tag=CCO46_13640 NZ_NPOH01000010.1 Protein Homology CDS 110783 111340 . + 0 ID=cds-WP_001245277.1;Parent=gene-CCO46_RS13635;Dbxref=GenBank:WP_001245277.1;Name=WP_001245277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=CCO46_RS13635;product=DcrB family lipoprotein;protein_id=WP_001245277.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 111344 112603 . - . ID=gene-CCO46_RS13640;Name=CCO46_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13640;old_locus_tag=CCO46_13645 NZ_NPOH01000010.1 Protein Homology CDS 111344 112603 . - 0 ID=cds-WP_097363362.1;Parent=gene-CCO46_RS13640;Dbxref=GenBank:WP_097363362.1;Name=WP_097363362.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=CCO46_RS13640;product=MFS transporter;protein_id=WP_097363362.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 112693 113742 . + . ID=gene-CCO46_RS13645;Name=CCO46_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13645;old_locus_tag=CCO46_13650 NZ_NPOH01000010.1 Protein Homology CDS 112693 113742 . + 0 ID=cds-WP_000179588.1;Parent=gene-CCO46_RS13645;Dbxref=GenBank:WP_000179588.1;Name=WP_000179588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=CCO46_RS13645;product=AI-2E family transporter;protein_id=WP_000179588.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 113794 114372 . + . ID=gene-CCO46_RS13650;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=CCO46_RS13650;old_locus_tag=CCO46_13655 NZ_NPOH01000010.1 Protein Homology CDS 113794 114372 . + 0 ID=cds-WP_000285379.1;Parent=gene-CCO46_RS13650;Dbxref=GenBank:WP_000285379.1;Name=WP_000285379.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=CCO46_RS13650;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285379.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 114464 114865 . + . ID=gene-CCO46_RS13655;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=CCO46_RS13655;old_locus_tag=CCO46_13660 NZ_NPOH01000010.1 Protein Homology CDS 114464 114865 . + 0 ID=cds-WP_001190057.1;Parent=gene-CCO46_RS13655;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=CCO46_RS13655;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 114954 116078 . - . ID=gene-CCO46_RS13660;Name=CCO46_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13660;old_locus_tag=CCO46_13665 NZ_NPOH01000010.1 Protein Homology CDS 114954 116078 . - 0 ID=cds-WP_001214764.1;Parent=gene-CCO46_RS13660;Dbxref=GenBank:WP_001214764.1;Name=WP_001214764.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=CCO46_RS13660;product=ABC transporter permease;protein_id=WP_001214764.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 116078 118819 . - . ID=gene-CCO46_RS13665;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=CCO46_RS13665;old_locus_tag=CCO46_13670 NZ_NPOH01000010.1 Protein Homology CDS 116078 118819 . - 0 ID=cds-WP_079972992.1;Parent=gene-CCO46_RS13665;Dbxref=GenBank:WP_079972992.1;Name=WP_079972992.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=CCO46_RS13665;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_079972992.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 118816 119883 . - . ID=gene-CCO46_RS13670;Name=CCO46_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13670;old_locus_tag=CCO46_13675 NZ_NPOH01000010.1 Protein Homology CDS 118816 119883 . - 0 ID=cds-WP_000359828.1;Parent=gene-CCO46_RS13670;Dbxref=GenBank:WP_000359828.1;Name=WP_000359828.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=CCO46_RS13670;product=HlyD family secretion protein;protein_id=WP_000359828.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 120189 121385 . - . ID=gene-CCO46_RS13675;Name=CCO46_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13675;old_locus_tag=CCO46_13680 NZ_NPOH01000010.1 Protein Homology CDS 120189 121385 . - 0 ID=cds-WP_000439230.1;Parent=gene-CCO46_RS13675;Dbxref=GenBank:WP_000439230.1;Name=WP_000439230.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=CCO46_RS13675;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439230.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 121616 123112 . + . ID=gene-CCO46_RS13680;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=CCO46_RS13680;old_locus_tag=CCO46_13685 NZ_NPOH01000010.1 Protein Homology CDS 121616 123112 . + 0 ID=cds-WP_000902764.1;Parent=gene-CCO46_RS13680;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=CCO46_RS13680;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 123253 123588 . - . ID=gene-CCO46_RS13685;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=CCO46_RS13685;old_locus_tag=CCO46_13690 NZ_NPOH01000010.1 Protein Homology CDS 123253 123588 . - 0 ID=cds-WP_000626193.1;Parent=gene-CCO46_RS13685;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=CCO46_RS13685;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 123976 124410 . + . ID=gene-CCO46_RS13690;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=CCO46_RS13690;old_locus_tag=CCO46_13695 NZ_NPOH01000010.1 Protein Homology CDS 123976 124410 . + 0 ID=cds-WP_000323565.1;Parent=gene-CCO46_RS13690;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=CCO46_RS13690;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 124735 126207 . + . ID=gene-CCO46_RS13695;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=CCO46_RS13695;old_locus_tag=CCO46_13700 NZ_NPOH01000010.1 Protein Homology CDS 124735 126207 . + 0 ID=cds-WP_097363363.1;Parent=gene-CCO46_RS13695;Dbxref=GenBank:WP_097363363.1;Name=WP_097363363.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=CCO46_RS13695;product=dipeptide/tripeptide permease DtpB;protein_id=WP_097363363.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 126299 127057 . - . ID=gene-CCO46_RS13700;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=CCO46_RS13700;old_locus_tag=CCO46_13705 NZ_NPOH01000010.1 Protein Homology CDS 126299 127057 . - 0 ID=cds-WP_023205380.1;Parent=gene-CCO46_RS13700;Dbxref=GenBank:WP_023205380.1;Name=WP_023205380.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=CCO46_RS13700;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_023205380.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 127064 129106 . - . ID=gene-CCO46_RS13705;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=CCO46_RS13705;old_locus_tag=CCO46_13710 NZ_NPOH01000010.1 Protein Homology CDS 127064 129106 . - 0 ID=cds-WP_000184178.1;Parent=gene-CCO46_RS13705;Dbxref=GenBank:WP_000184178.1;Name=WP_000184178.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=CCO46_RS13705;product=oligopeptidase A;protein_id=WP_000184178.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 129288 130559 . - . ID=gene-CCO46_RS13710;Name=CCO46_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13710;old_locus_tag=CCO46_13715 NZ_NPOH01000010.1 Protein Homology CDS 129288 130559 . - 0 ID=cds-WP_000766151.1;Parent=gene-CCO46_RS13710;Dbxref=GenBank:WP_000766151.1;Name=WP_000766151.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=CCO46_RS13710;product=acid phosphatase;protein_id=WP_000766151.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 130770 131612 . + . ID=gene-CCO46_RS13715;Name=CCO46_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13715;old_locus_tag=CCO46_13720 NZ_NPOH01000010.1 Protein Homology CDS 130770 131612 . + 0 ID=cds-WP_000954235.1;Parent=gene-CCO46_RS13715;Dbxref=GenBank:WP_000954235.1;Name=WP_000954235.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=CCO46_RS13715;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954235.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 131717 133069 . + . ID=gene-CCO46_RS13720;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=CCO46_RS13720;old_locus_tag=CCO46_13725 NZ_NPOH01000010.1 Protein Homology CDS 131717 133069 . + 0 ID=cds-WP_000160775.1;Parent=gene-CCO46_RS13720;Dbxref=GenBank:WP_000160775.1;Name=WP_000160775.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=CCO46_RS13720;product=glutathione-disulfide reductase;protein_id=WP_000160775.1;transl_table=11 NZ_NPOH01000010.1 RefSeq pseudogene 133116 133247 . - . ID=gene-CCO46_RS13725;Name=CCO46_RS13725;end_range=133247,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS13725;old_locus_tag=CCO46_13730;partial=true;pseudo=true NZ_NPOH01000010.1 Protein Homology CDS 133116 133247 . - 0 ID=cds-CCO46_RS13725;Parent=gene-CCO46_RS13725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=133247,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=CCO46_RS13725;partial=true;product=L-asparaginase;pseudo=true;transl_table=11 NZ_NPOH01000010.1 RefSeq pseudogene 133240 133320 . - . ID=gene-CCO46_RS25875;Name=CCO46_RS25875;end_range=133320,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25875;old_locus_tag=CCO46_13735;partial=true;pseudo=true;start_range=.,133240 NZ_NPOH01000010.1 Protein Homology CDS 133240 133320 . - 0 ID=cds-CCO46_RS25875;Parent=gene-CCO46_RS25875;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=133320,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226344.1;locus_tag=CCO46_RS25875;partial=true;product=asparaginase domain-containing protein;pseudo=true;start_range=.,133240;transl_table=11 NZ_NPOH01000010.1 RefSeq pseudogene 133469 133840 . - . ID=gene-CCO46_RS13735;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=pseudogene;locus_tag=CCO46_RS13735;old_locus_tag=CCO46_13740;partial=true;pseudo=true;start_range=.,133469 NZ_NPOH01000010.1 Protein Homology CDS 133469 133840 . - 0 ID=cds-CCO46_RS13735;Parent=gene-CCO46_RS13735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=CCO46_RS13735;partial=true;product=fructose-asparagine asparaginase;pseudo=true;start_range=.,133469;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 133899 135218 . - . ID=gene-CCO46_RS13740;Name=CCO46_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13740;old_locus_tag=CCO46_13745 NZ_NPOH01000010.1 Protein Homology CDS 133899 135218 . - 0 ID=cds-WP_000498935.1;Parent=gene-CCO46_RS13740;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=CCO46_RS13740;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 135272 136117 . - . ID=gene-CCO46_RS13745;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=CCO46_RS13745;old_locus_tag=CCO46_13750 NZ_NPOH01000010.1 Protein Homology CDS 135272 136117 . - 0 ID=cds-WP_023202029.1;Parent=gene-CCO46_RS13745;Dbxref=GenBank:WP_023202029.1;Name=WP_023202029.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=CCO46_RS13745;product=fructose-aspartate kinase;protein_id=WP_023202029.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 136181 137158 . - . ID=gene-CCO46_RS13750;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=CCO46_RS13750;old_locus_tag=CCO46_13755 NZ_NPOH01000010.1 Protein Homology CDS 136181 137158 . - 0 ID=cds-WP_077248388.1;Parent=gene-CCO46_RS13750;Dbxref=GenBank:WP_077248388.1;Name=WP_077248388.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=CCO46_RS13750;product=6-phosphofructose-aspartate deglycase;protein_id=WP_077248388.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 137334 138053 . - . ID=gene-CCO46_RS13755;Name=CCO46_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13755;old_locus_tag=CCO46_13760 NZ_NPOH01000010.1 Protein Homology CDS 137334 138053 . - 0 ID=cds-WP_000572565.1;Parent=gene-CCO46_RS13755;Dbxref=GenBank:WP_000572565.1;Name=WP_000572565.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=CCO46_RS13755;product=GntR family transcriptional regulator;protein_id=WP_000572565.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 138378 140027 . + . ID=gene-CCO46_RS13760;Name=CCO46_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13760;old_locus_tag=CCO46_13765 NZ_NPOH01000010.1 Protein Homology CDS 138378 140027 . + 0 ID=cds-WP_000934257.1;Parent=gene-CCO46_RS13760;Dbxref=GenBank:WP_000934257.1;Name=WP_000934257.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=CCO46_RS13760;product=alpha%2Calpha-trehalase;protein_id=WP_000934257.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 140040 141629 . - . ID=gene-CCO46_RS13765;Name=CCO46_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13765;old_locus_tag=CCO46_13770 NZ_NPOH01000010.1 Protein Homology CDS 140040 141629 . - 0 ID=cds-WP_000185008.1;Parent=gene-CCO46_RS13765;Dbxref=GenBank:WP_000185008.1;Name=WP_000185008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=CCO46_RS13765;product=STY4199 family HEPN domain-containing protein;protein_id=WP_000185008.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 141910 142266 . + . ID=gene-CCO46_RS13770;Name=CCO46_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13770;old_locus_tag=CCO46_13775 NZ_NPOH01000010.1 Protein Homology CDS 141910 142266 . + 0 ID=cds-WP_001120251.1;Parent=gene-CCO46_RS13770;Dbxref=GenBank:WP_001120251.1;Name=WP_001120251.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=CCO46_RS13770;product=glycoside hydrolase family protein;protein_id=WP_001120251.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 142272 142874 . - . ID=gene-CCO46_RS13775;Name=CCO46_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13775;old_locus_tag=CCO46_13780 NZ_NPOH01000010.1 Protein Homology CDS 142272 142874 . - 0 ID=cds-WP_001196081.1;Parent=gene-CCO46_RS13775;Dbxref=GenBank:WP_001196081.1;Name=WP_001196081.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=CCO46_RS13775;product=response regulator transcription factor;protein_id=WP_001196081.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 143505 144404 . + . ID=gene-CCO46_RS13780;Name=CCO46_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13780;old_locus_tag=CCO46_13785 NZ_NPOH01000010.1 Protein Homology CDS 143505 144404 . + 0 ID=cds-WP_000358046.1;Parent=gene-CCO46_RS13780;Dbxref=GenBank:WP_000358046.1;Name=WP_000358046.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=CCO46_RS13780;product=LysR family transcriptional regulator;protein_id=WP_000358046.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 144477 145505 . + . ID=gene-CCO46_RS13785;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=CCO46_RS13785;old_locus_tag=CCO46_13790 NZ_NPOH01000010.1 Protein Homology CDS 144477 145505 . + 0 ID=cds-WP_000191231.1;Parent=gene-CCO46_RS13785;Dbxref=GenBank:WP_000191231.1;Name=WP_000191231.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=CCO46_RS13785;product=inner membrane protein YhjD;protein_id=WP_000191231.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 145856 147178 . + . ID=gene-CCO46_RS13790;Name=CCO46_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13790;old_locus_tag=CCO46_13795 NZ_NPOH01000010.1 Protein Homology CDS 145856 147178 . + 0 ID=cds-WP_001148983.1;Parent=gene-CCO46_RS13790;Dbxref=GenBank:WP_001148983.1;Name=WP_001148983.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=CCO46_RS13790;product=MFS transporter;protein_id=WP_001148983.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 147218 149278 . - . ID=gene-CCO46_RS13795;Name=CCO46_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13795;old_locus_tag=CCO46_13800 NZ_NPOH01000010.1 Protein Homology CDS 147218 149278 . - 0 ID=cds-WP_000158680.1;Parent=gene-CCO46_RS13795;Dbxref=GenBank:WP_000158680.1;Name=WP_000158680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=CCO46_RS13795;product=AsmA family protein;protein_id=WP_000158680.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 149388 150155 . - . ID=gene-CCO46_RS13800;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=CCO46_RS13800;old_locus_tag=CCO46_13805 NZ_NPOH01000010.1 Protein Homology CDS 149388 150155 . - 0 ID=cds-WP_000595623.1;Parent=gene-CCO46_RS13800;Dbxref=GenBank:WP_000595623.1;Name=WP_000595623.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=CCO46_RS13800;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595623.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 150385 151314 . + . ID=gene-CCO46_RS13805;Name=CCO46_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13805;old_locus_tag=CCO46_13810 NZ_NPOH01000010.1 Protein Homology CDS 150385 151314 . + 0 ID=cds-WP_058331599.1;Parent=gene-CCO46_RS13805;Dbxref=GenBank:WP_058331599.1;Name=WP_058331599.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=CCO46_RS13805;product=sugar kinase;protein_id=WP_058331599.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 151368 152855 . - . ID=gene-CCO46_RS13810;Name=CCO46_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13810;old_locus_tag=CCO46_13815 NZ_NPOH01000010.1 Protein Homology CDS 151368 152855 . - 0 ID=cds-WP_097363364.1;Parent=gene-CCO46_RS13810;Dbxref=GenBank:WP_097363364.1;Name=WP_097363364.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=CCO46_RS13810;product=M16 family metallopeptidase;protein_id=WP_097363364.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 153075 154361 . - . ID=gene-CCO46_RS13815;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=CCO46_RS13815;old_locus_tag=CCO46_13820 NZ_NPOH01000010.1 Protein Homology CDS 153075 154361 . - 0 ID=cds-WP_000858228.1;Parent=gene-CCO46_RS13815;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=CCO46_RS13815;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 154519 156525 . - . ID=gene-CCO46_RS13820;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=CCO46_RS13820;old_locus_tag=CCO46_13825 NZ_NPOH01000010.1 Protein Homology CDS 154519 156525 . - 0 ID=cds-WP_058331598.1;Parent=gene-CCO46_RS13820;Dbxref=GenBank:WP_058331598.1;Name=WP_058331598.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=CCO46_RS13820;product=biofilm formation regulator HmsP;protein_id=WP_058331598.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 156699 160241 . - . ID=gene-CCO46_RS13830;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=CCO46_RS13830;old_locus_tag=CCO46_13835 NZ_NPOH01000010.1 Protein Homology CDS 156699 160241 . - 0 ID=cds-WP_097363365.1;Parent=gene-CCO46_RS13830;Dbxref=GenBank:WP_097363365.1;Name=WP_097363365.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=CCO46_RS13830;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_097363365.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 160223 161332 . - . ID=gene-CCO46_RS13835;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=CCO46_RS13835;old_locus_tag=CCO46_13840 NZ_NPOH01000010.1 Protein Homology CDS 160223 161332 . - 0 ID=cds-WP_000988802.1;Parent=gene-CCO46_RS13835;Dbxref=GenBank:WP_000988802.1;Name=WP_000988802.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=CCO46_RS13835;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_000988802.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 161336 163636 . - . ID=gene-CCO46_RS13840;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=CCO46_RS13840;old_locus_tag=CCO46_13845 NZ_NPOH01000010.1 Protein Homology CDS 161336 163636 . - 0 ID=cds-WP_000823796.1;Parent=gene-CCO46_RS13840;Dbxref=GenBank:WP_000823796.1;Name=WP_000823796.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=CCO46_RS13840;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823796.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 163647 166271 . - . ID=gene-CCO46_RS13845;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=CCO46_RS13845;old_locus_tag=CCO46_13850 NZ_NPOH01000010.1 Protein Homology CDS 163647 166271 . - 0 ID=cds-WP_097363366.1;Parent=gene-CCO46_RS13845;Dbxref=GenBank:WP_097363366.1;Name=WP_097363366.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=CCO46_RS13845;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_097363366.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 166268 167020 . - . ID=gene-CCO46_RS13850;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=CCO46_RS13850;old_locus_tag=CCO46_13855 NZ_NPOH01000010.1 Protein Homology CDS 166268 167020 . - 0 ID=cds-WP_000996113.1;Parent=gene-CCO46_RS13850;Dbxref=GenBank:WP_000996113.1;Name=WP_000996113.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=CCO46_RS13850;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996113.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 167021 167224 . - . ID=gene-CCO46_RS13855;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=CCO46_RS13855;old_locus_tag=CCO46_13860 NZ_NPOH01000010.1 Protein Homology CDS 167021 167224 . - 0 ID=cds-WP_000282616.1;Parent=gene-CCO46_RS13855;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=CCO46_RS13855;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 167469 169040 . + . ID=gene-CCO46_RS13860;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=CCO46_RS13860;old_locus_tag=CCO46_13865 NZ_NPOH01000010.1 Protein Homology CDS 167469 169040 . + 0 ID=cds-WP_080160598.1;Parent=gene-CCO46_RS13860;Dbxref=GenBank:WP_080160598.1;Name=WP_080160598.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=CCO46_RS13860;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_080160598.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 169037 169228 . + . ID=gene-CCO46_RS13865;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=CCO46_RS13865;old_locus_tag=CCO46_13870 NZ_NPOH01000010.1 Protein Homology CDS 169037 169228 . + 0 ID=cds-WP_000988321.1;Parent=gene-CCO46_RS13865;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=CCO46_RS13865;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 169225 170904 . + . ID=gene-CCO46_RS13870;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=CCO46_RS13870;old_locus_tag=CCO46_13875 NZ_NPOH01000010.1 Protein Homology CDS 169225 170904 . + 0 ID=cds-WP_058331597.1;Parent=gene-CCO46_RS13870;Dbxref=GenBank:WP_058331597.1;Name=WP_058331597.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=CCO46_RS13870;product=cellulose biosynthesis protein BcsG;protein_id=WP_058331597.1;transl_table=11 NZ_NPOH01000010.1 RefSeq gene 170986 171093 . - . ID=gene-CCO46_RS13875;Name=CCO46_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13875;old_locus_tag=CCO46_13880 NZ_NPOH01000010.1 Protein Homology CDS 170986 171093 . - 0 ID=cds-WP_001537650.1;Parent=gene-CCO46_RS13875;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=CCO46_RS13875;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11 ##sequence-region NZ_NPOH01000011.1 1 162594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000011.1 RefSeq region 1 162594 . + . ID=NZ_NPOH01000011.1:1..162594;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000011.1 RefSeq gene 242 1609 . - . ID=gene-CCO46_RS13880;Name=CCO46_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13880;old_locus_tag=CCO46_13885 NZ_NPOH01000011.1 Protein Homology CDS 242 1609 . - 0 ID=cds-WP_000626392.1;Parent=gene-CCO46_RS13880;Dbxref=GenBank:WP_000626392.1;Name=WP_000626392.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=CCO46_RS13880;product=L-serine ammonia-lyase;protein_id=WP_000626392.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 1668 2957 . - . ID=gene-CCO46_RS13885;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=CCO46_RS13885;old_locus_tag=CCO46_13890 NZ_NPOH01000011.1 Protein Homology CDS 1668 2957 . - 0 ID=cds-WP_000450462.1;Parent=gene-CCO46_RS13885;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=CCO46_RS13885;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 3522 4886 . - . ID=gene-CCO46_RS13890;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=CCO46_RS13890;old_locus_tag=CCO46_13895 NZ_NPOH01000011.1 Protein Homology CDS 3522 4886 . - 0 ID=cds-WP_000627973.1;Parent=gene-CCO46_RS13890;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=CCO46_RS13890;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 4999 5847 . - . ID=gene-CCO46_RS13895;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CCO46_RS13895;old_locus_tag=CCO46_13900 NZ_NPOH01000011.1 Protein Homology CDS 4999 5847 . - 0 ID=cds-WP_064043891.1;Parent=gene-CCO46_RS13895;Dbxref=GenBank:WP_064043891.1;Name=WP_064043891.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=CCO46_RS13895;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_064043891.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 5916 6461 . + . ID=gene-CCO46_RS13900;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=CCO46_RS13900;old_locus_tag=CCO46_13905 NZ_NPOH01000011.1 Protein Homology CDS 5916 6461 . + 0 ID=cds-WP_000343990.1;Parent=gene-CCO46_RS13900;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=CCO46_RS13900;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 7073 7402 . + . ID=gene-CCO46_RS13910;Name=CCO46_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13910;old_locus_tag=CCO46_13915 NZ_NPOH01000011.1 Protein Homology CDS 7073 7402 . + 0 ID=cds-WP_000207014.1;Parent=gene-CCO46_RS13910;Dbxref=GenBank:WP_000207014.1;Name=WP_000207014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=CCO46_RS13910;product=YqcC family protein;protein_id=WP_000207014.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 7402 8184 . + . ID=gene-CCO46_RS13915;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=CCO46_RS13915;old_locus_tag=CCO46_13920 NZ_NPOH01000011.1 Protein Homology CDS 7402 8184 . + 0 ID=cds-WP_000890028.1;Parent=gene-CCO46_RS13915;Dbxref=GenBank:WP_000890028.1;Name=WP_000890028.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=CCO46_RS13915;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890028.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 8203 8652 . + . ID=gene-CCO46_RS13920;Name=CCO46_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13920;old_locus_tag=CCO46_13925 NZ_NPOH01000011.1 Protein Homology CDS 8203 8652 . + 0 ID=cds-WP_000807736.1;Parent=gene-CCO46_RS13920;Dbxref=GenBank:WP_000807736.1;Name=WP_000807736.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=CCO46_RS13920;product=flavodoxin;protein_id=WP_000807736.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 9134 10492 . + . ID=gene-CCO46_RS13930;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=CCO46_RS13930;old_locus_tag=CCO46_13935 NZ_NPOH01000011.1 Protein Homology CDS 9134 10492 . + 0 ID=cds-WP_000097016.1;Parent=gene-CCO46_RS13930;Dbxref=GenBank:WP_000097016.1;Name=WP_000097016.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=CCO46_RS13930;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097016.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 10489 11829 . + . ID=gene-CCO46_RS13935;Name=CCO46_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13935;old_locus_tag=CCO46_13940 NZ_NPOH01000011.1 Protein Homology CDS 10489 11829 . + 0 ID=cds-WP_058331858.1;Parent=gene-CCO46_RS13935;Dbxref=GenBank:WP_058331858.1;Name=WP_058331858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=CCO46_RS13935;product=enolase C-terminal domain-like protein;protein_id=WP_058331858.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 11850 13190 . + . ID=gene-CCO46_RS13940;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=CCO46_RS13940;old_locus_tag=CCO46_13945 NZ_NPOH01000011.1 Protein Homology CDS 11850 13190 . + 0 ID=cds-WP_000107113.1;Parent=gene-CCO46_RS13940;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=CCO46_RS13940;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 13268 14410 . + . ID=gene-CCO46_RS13945;Name=CCO46_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13945;old_locus_tag=CCO46_13950 NZ_NPOH01000011.1 Protein Homology CDS 13268 14410 . + 0 ID=cds-WP_000706486.1;Parent=gene-CCO46_RS13945;Dbxref=GenBank:WP_000706486.1;Name=WP_000706486.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=CCO46_RS13945;product=glycerate kinase;protein_id=WP_000706486.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 14454 17210 . - . ID=gene-CCO46_RS13950;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=CCO46_RS13950;old_locus_tag=CCO46_13955 NZ_NPOH01000011.1 Protein Homology CDS 14454 17210 . - 0 ID=cds-WP_000186400.1;Parent=gene-CCO46_RS13950;Dbxref=GenBank:WP_000186400.1;Name=WP_000186400.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=CCO46_RS13950;product=two-component sensor histidine kinase BarA;protein_id=WP_000186400.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 17268 18563 . + . ID=gene-CCO46_RS13955;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CCO46_RS13955;old_locus_tag=CCO46_13960 NZ_NPOH01000011.1 Protein Homology CDS 17268 18563 . + 0 ID=cds-WP_000046861.1;Parent=gene-CCO46_RS13955;Dbxref=GenBank:WP_000046861.1;Name=WP_000046861.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=CCO46_RS13955;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046861.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 18615 20849 . + . ID=gene-CCO46_RS13960;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=CCO46_RS13960;old_locus_tag=CCO46_13965 NZ_NPOH01000011.1 Protein Homology CDS 18615 20849 . + 0 ID=cds-WP_000226841.1;Parent=gene-CCO46_RS13960;Dbxref=GenBank:WP_000226841.1;Name=WP_000226841.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=CCO46_RS13960;product=GTP diphosphokinase;protein_id=WP_000226841.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 20933 21289 . + . ID=gene-CCO46_RS13965;Name=CCO46_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13965;old_locus_tag=CCO46_13970 NZ_NPOH01000011.1 Protein Homology CDS 20933 21289 . + 0 ID=cds-WP_000480218.1;Parent=gene-CCO46_RS13965;Dbxref=GenBank:WP_000480218.1;Name=WP_000480218.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=CCO46_RS13965;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_000480218.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 21255 21551 . + . ID=gene-CCO46_RS13970;Name=CCO46_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13970;old_locus_tag=CCO46_13975 NZ_NPOH01000011.1 Protein Homology CDS 21255 21551 . + 0 ID=cds-WP_015633101.1;Parent=gene-CCO46_RS13970;Dbxref=GenBank:WP_015633101.1;Name=WP_015633101.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=CCO46_RS13970;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_015633101.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 21998 22990 . - . ID=gene-CCO46_RS24955;Name=CCO46_RS24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24955 NZ_NPOH01000011.1 GeneMarkS-2+ CDS 21998 22990 . - 0 ID=cds-WP_015633100.1;Parent=gene-CCO46_RS24955;Dbxref=GenBank:WP_015633100.1;Name=WP_015633100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS24955;product=hypothetical protein;protein_id=WP_015633100.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 23120 23656 . - . ID=gene-CCO46_RS13980;Name=CCO46_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13980;old_locus_tag=CCO46_13985 NZ_NPOH01000011.1 Protein Homology CDS 23120 23656 . - 0 ID=cds-WP_001079649.1;Parent=gene-CCO46_RS13980;Dbxref=GenBank:WP_001079649.1;Name=WP_001079649.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=CCO46_RS13980;product=fimbrial protein;protein_id=WP_001079649.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 23653 24123 . - . ID=gene-CCO46_RS13985;Name=CCO46_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13985;old_locus_tag=CCO46_13990 NZ_NPOH01000011.1 Protein Homology CDS 23653 24123 . - 0 ID=cds-WP_000832397.1;Parent=gene-CCO46_RS13985;Dbxref=GenBank:WP_000832397.1;Name=WP_000832397.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=CCO46_RS13985;product=fimbrial protein;protein_id=WP_000832397.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 24138 24644 . - . ID=gene-CCO46_RS13990;Name=CCO46_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13990;old_locus_tag=CCO46_13995 NZ_NPOH01000011.1 Protein Homology CDS 24138 24644 . - 0 ID=cds-WP_000178257.1;Parent=gene-CCO46_RS13990;Dbxref=GenBank:WP_000178257.1;Name=WP_000178257.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=CCO46_RS13990;product=fimbrial protein;protein_id=WP_000178257.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 24664 25437 . - . ID=gene-CCO46_RS13995;Name=CCO46_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13995;old_locus_tag=CCO46_14000 NZ_NPOH01000011.1 Protein Homology CDS 24664 25437 . - 0 ID=cds-WP_001044458.1;Parent=gene-CCO46_RS13995;Dbxref=GenBank:WP_001044458.1;Name=WP_001044458.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=CCO46_RS13995;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001044458.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 25450 28146 . - . ID=gene-CCO46_RS14000;Name=CCO46_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14000;old_locus_tag=CCO46_14005 NZ_NPOH01000011.1 Protein Homology CDS 25450 28146 . - 0 ID=cds-WP_071883618.1;Parent=gene-CCO46_RS14000;Dbxref=GenBank:WP_071883618.1;Name=WP_071883618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=CCO46_RS14000;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_071883618.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 28229 28816 . - . ID=gene-CCO46_RS14005;Name=CCO46_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14005;old_locus_tag=CCO46_14010 NZ_NPOH01000011.1 Protein Homology CDS 28229 28816 . - 0 ID=cds-WP_097363367.1;Parent=gene-CCO46_RS14005;Dbxref=GenBank:WP_097363367.1;Name=WP_097363367.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=CCO46_RS14005;product=fimbrial protein;protein_id=WP_097363367.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 29422 30222 . + . ID=gene-CCO46_RS14010;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=CCO46_RS14010;old_locus_tag=CCO46_14015 NZ_NPOH01000011.1 Protein Homology CDS 29422 30222 . + 0 ID=cds-WP_023241556.1;Parent=gene-CCO46_RS14010;Dbxref=GenBank:WP_023241556.1;Name=WP_023241556.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=CCO46_RS14010;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_023241556.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 30450 32087 . + . ID=gene-CCO46_RS14015;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CCO46_RS14015;old_locus_tag=CCO46_14020 NZ_NPOH01000011.1 Protein Homology CDS 30450 32087 . + 0 ID=cds-WP_000210863.1;Parent=gene-CCO46_RS14015;Dbxref=GenBank:WP_000210863.1;Name=WP_000210863.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=CCO46_RS14015;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210863.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 32170 33468 . + . ID=gene-CCO46_RS14020;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CCO46_RS14020;old_locus_tag=CCO46_14025 NZ_NPOH01000011.1 Protein Homology CDS 32170 33468 . + 0 ID=cds-WP_000036734.1;Parent=gene-CCO46_RS14020;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=CCO46_RS14020;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 33604 34275 . + . ID=gene-CCO46_RS14025;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CCO46_RS14025;old_locus_tag=CCO46_14030 NZ_NPOH01000011.1 Protein Homology CDS 33604 34275 . + 0 ID=cds-WP_001199961.1;Parent=gene-CCO46_RS14025;Dbxref=GenBank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=CCO46_RS14025;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11 NZ_NPOH01000011.1 RefSeq direct_repeat 34572 36249 . + . ID=id-NZ_NPOH01000011.1:34572..36249;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=34572..34600;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_NPOH01000011.1 RefSeq gene 36408 37205 . + . ID=gene-CCO46_RS14030;Name=CCO46_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14030;old_locus_tag=CCO46_14035 NZ_NPOH01000011.1 Protein Homology CDS 36408 37205 . + 0 ID=cds-WP_001208009.1;Parent=gene-CCO46_RS14030;Dbxref=GenBank:WP_001208009.1;Name=WP_001208009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=CCO46_RS14030;product=MBL fold metallo-hydrolase;protein_id=WP_001208009.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 37293 37655 . - . ID=gene-CCO46_RS14035;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CCO46_RS14035;old_locus_tag=CCO46_14040 NZ_NPOH01000011.1 Protein Homology CDS 37293 37655 . - 0 ID=cds-WP_000108312.1;Parent=gene-CCO46_RS14035;Dbxref=GenBank:WP_000108312.1;Name=WP_000108312.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=CCO46_RS14035;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108312.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 38078 39877 . + . ID=gene-CCO46_RS14045;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=CCO46_RS14045;old_locus_tag=CCO46_14050 NZ_NPOH01000011.1 Protein Homology CDS 38078 39877 . + 0 ID=cds-WP_058331998.1;Parent=gene-CCO46_RS14045;Dbxref=GenBank:WP_058331998.1;Name=WP_058331998.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=CCO46_RS14045;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_058331998.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 39877 41589 . + . ID=gene-CCO46_RS14050;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=CCO46_RS14050;old_locus_tag=CCO46_14055 NZ_NPOH01000011.1 Protein Homology CDS 39877 41589 . + 0 ID=cds-WP_058331999.1;Parent=gene-CCO46_RS14050;Dbxref=GenBank:WP_058331999.1;Name=WP_058331999.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=CCO46_RS14050;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_058331999.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 41665 42399 . + . ID=gene-CCO46_RS14060;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=CCO46_RS14060;old_locus_tag=CCO46_14065 NZ_NPOH01000011.1 Protein Homology CDS 41665 42399 . + 0 ID=cds-WP_023136478.1;Parent=gene-CCO46_RS14060;Dbxref=GenBank:WP_023136478.1;Name=WP_023136478.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=CCO46_RS14060;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_023136478.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 42487 43440 . - . ID=gene-CCO46_RS14065;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=CCO46_RS14065;old_locus_tag=CCO46_14070 NZ_NPOH01000011.1 Protein Homology CDS 42487 43440 . - 0 ID=cds-WP_024146070.1;Parent=gene-CCO46_RS14065;Dbxref=GenBank:WP_024146070.1;Name=WP_024146070.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=CCO46_RS14065;product=SPI-1 type III secretion system effector SopD;protein_id=WP_024146070.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 43824 46523 . - . ID=gene-CCO46_RS14070;Name=CCO46_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14070;old_locus_tag=CCO46_14075 NZ_NPOH01000011.1 Protein Homology CDS 43824 46523 . - 0 ID=cds-WP_080210143.1;Parent=gene-CCO46_RS14070;Dbxref=GenBank:WP_080210143.1;Name=WP_080210143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192071.1;locus_tag=CCO46_RS14070;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_080210143.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 46881 48416 . + . ID=gene-CCO46_RS14075;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=CCO46_RS14075;old_locus_tag=CCO46_14080 NZ_NPOH01000011.1 Protein Homology CDS 46881 48416 . + 0 ID=cds-WP_080210145.1;Parent=gene-CCO46_RS14075;Dbxref=GenBank:WP_080210145.1;Name=WP_080210145.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000366313.1;locus_tag=CCO46_RS14075;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_080210145.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 48433 49035 . + . ID=gene-CCO46_RS14080;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=CCO46_RS14080;old_locus_tag=CCO46_14085 NZ_NPOH01000011.1 Protein Homology CDS 48433 49035 . + 0 ID=cds-WP_000935106.1;Parent=gene-CCO46_RS14080;Dbxref=GenBank:WP_000935106.1;Name=WP_000935106.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935106.1;locus_tag=CCO46_RS14080;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_000935106.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 49058 50116 . + . ID=gene-CCO46_RS14085;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=CCO46_RS14085;old_locus_tag=CCO46_14090 NZ_NPOH01000011.1 Protein Homology CDS 49058 50116 . + 0 ID=cds-WP_063809720.1;Parent=gene-CCO46_RS14085;Dbxref=GenBank:WP_063809720.1;Name=WP_063809720.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001804435.1;locus_tag=CCO46_RS14085;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_063809720.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 50126 50851 . + . ID=gene-CCO46_RS14090;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=CCO46_RS14090;old_locus_tag=CCO46_14095 NZ_NPOH01000011.1 Protein Homology CDS 50126 50851 . + 0 ID=cds-WP_000666424.1;Parent=gene-CCO46_RS14090;Dbxref=GenBank:WP_000666424.1;Name=WP_000666424.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666428.1;locus_tag=CCO46_RS14090;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_000666424.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 50851 51555 . + . ID=gene-CCO46_RS14095;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=CCO46_RS14095;old_locus_tag=CCO46_14100 NZ_NPOH01000011.1 Protein Homology CDS 50851 51555 . + 0 ID=cds-WP_080210146.1;Parent=gene-CCO46_RS14095;Dbxref=GenBank:WP_080210146.1;Name=WP_080210146.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748704.1;locus_tag=CCO46_RS14095;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_080210146.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 51555 52472 . + . ID=gene-CCO46_RS14100;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=CCO46_RS14100;old_locus_tag=CCO46_14105 NZ_NPOH01000011.1 Protein Homology CDS 51555 52472 . + 0 ID=cds-WP_000118674.1;Parent=gene-CCO46_RS14100;Dbxref=GenBank:WP_000118674.1;Name=WP_000118674.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417235.1;locus_tag=CCO46_RS14100;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000118674.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 52475 52768 . + . ID=gene-CCO46_RS14105;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=CCO46_RS14105;old_locus_tag=CCO46_14110 NZ_NPOH01000011.1 Protein Homology CDS 52475 52768 . + 0 ID=cds-WP_079942321.1;Parent=gene-CCO46_RS14105;Dbxref=GenBank:WP_079942321.1;Name=WP_079942321.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062285.1;locus_tag=CCO46_RS14105;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_079942321.1;transl_table=11 NZ_NPOH01000011.1 RefSeq direct_repeat 52853 55749 . + . ID=id-NZ_NPOH01000011.1:52853..55749;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=52853..52881;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_NPOH01000011.1 RefSeq gene 55764 56810 . - . ID=gene-CCO46_RS14110;Name=CCO46_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14110;old_locus_tag=CCO46_14115 NZ_NPOH01000011.1 Protein Homology CDS 55764 56810 . - 0 ID=cds-WP_000490481.1;Parent=gene-CCO46_RS14110;Dbxref=GenBank:WP_000490481.1;Name=WP_000490481.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=CCO46_RS14110;product=aminopeptidase;protein_id=WP_000490481.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 57061 57969 . + . ID=gene-CCO46_RS14115;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=CCO46_RS14115;old_locus_tag=CCO46_14120 NZ_NPOH01000011.1 Protein Homology CDS 57061 57969 . + 0 ID=cds-WP_000372384.1;Parent=gene-CCO46_RS14115;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=CCO46_RS14115;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 57979 59418 . + . ID=gene-CCO46_RS14120;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=CCO46_RS14120;old_locus_tag=CCO46_14125 NZ_NPOH01000011.1 Protein Homology CDS 57979 59418 . + 0 ID=cds-WP_080207563.1;Parent=gene-CCO46_RS14120;Dbxref=GenBank:WP_080207563.1;Name=WP_080207563.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=CCO46_RS14120;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_080207563.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 59405 60010 . + . ID=gene-CCO46_RS14125;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=CCO46_RS14125;old_locus_tag=CCO46_14130 NZ_NPOH01000011.1 Protein Homology CDS 59405 60010 . + 0 ID=cds-WP_058331197.1;Parent=gene-CCO46_RS14125;Dbxref=GenBank:WP_058331197.1;Name=WP_058331197.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=CCO46_RS14125;product=adenylyl-sulfate kinase;protein_id=WP_058331197.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 60061 60384 . + . ID=gene-CCO46_RS14130;Name=CCO46_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14130;old_locus_tag=CCO46_14135 NZ_NPOH01000011.1 Protein Homology CDS 60061 60384 . + 0 ID=cds-WP_001537530.1;Parent=gene-CCO46_RS14130;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=CCO46_RS14130;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 60575 60886 . + . ID=gene-CCO46_RS14135;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=CCO46_RS14135;old_locus_tag=CCO46_14140 NZ_NPOH01000011.1 Protein Homology CDS 60575 60886 . + 0 ID=cds-WP_000517480.1;Parent=gene-CCO46_RS14135;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=CCO46_RS14135;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 60905 61615 . + . ID=gene-CCO46_RS14140;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CCO46_RS14140;old_locus_tag=CCO46_14145 NZ_NPOH01000011.1 Protein Homology CDS 60905 61615 . + 0 ID=cds-WP_000741653.1;Parent=gene-CCO46_RS14140;Dbxref=GenBank:WP_000741653.1;Name=WP_000741653.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=CCO46_RS14140;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741653.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 61615 62094 . + . ID=gene-CCO46_RS14145;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CCO46_RS14145;old_locus_tag=CCO46_14150 NZ_NPOH01000011.1 Protein Homology CDS 61615 62094 . + 0 ID=cds-WP_001219244.1;Parent=gene-CCO46_RS14145;Dbxref=GenBank:WP_001219244.1;Name=WP_001219244.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=CCO46_RS14145;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219244.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 62091 63140 . + . ID=gene-CCO46_RS14150;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=CCO46_RS14150;old_locus_tag=CCO46_14155 NZ_NPOH01000011.1 Protein Homology CDS 62091 63140 . + 0 ID=cds-WP_000134246.1;Parent=gene-CCO46_RS14150;Dbxref=GenBank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=CCO46_RS14150;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 63121 63882 . + . ID=gene-CCO46_RS14155;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=CCO46_RS14155;old_locus_tag=CCO46_14160 NZ_NPOH01000011.1 Protein Homology CDS 63121 63882 . + 0 ID=cds-WP_001221538.1;Parent=gene-CCO46_RS14155;Dbxref=GenBank:WP_001221538.1;Name=WP_001221538.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=CCO46_RS14155;product=5'/3'-nucleotidase SurE;protein_id=WP_001221538.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 63876 64502 . + . ID=gene-CCO46_RS14160;Name=CCO46_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14160;old_locus_tag=CCO46_14165 NZ_NPOH01000011.1 Protein Homology CDS 63876 64502 . + 0 ID=cds-WP_000253545.1;Parent=gene-CCO46_RS14160;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=CCO46_RS14160;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 64641 64799 . - . ID=gene-CCO46_RS25495;Name=CCO46_RS25495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25495 NZ_NPOH01000011.1 Protein Homology CDS 64641 64799 . - 0 ID=cds-WP_223148970.1;Parent=gene-CCO46_RS25495;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=CCO46_RS25495;product=peptidase;protein_id=WP_223148970.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 64729 65811 . + . ID=gene-CCO46_RS14165;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=CCO46_RS14165;old_locus_tag=CCO46_14170 NZ_NPOH01000011.1 Protein Homology CDS 64729 65811 . + 0 ID=cds-WP_223151197.1;Parent=gene-CCO46_RS14165;Dbxref=GenBank:WP_223151197.1;Name=WP_223151197.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=CCO46_RS14165;product=murein hydrolase activator NlpD;protein_id=WP_223151197.1;transl_table=11 NZ_NPOH01000011.1 RefSeq pseudogene 65874 66866 . + . ID=gene-CCO46_RS14170;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=pseudogene;locus_tag=CCO46_RS14170;old_locus_tag=CCO46_14175;pseudo=true NZ_NPOH01000011.1 Protein Homology CDS 65874 66866 . + 0 ID=cds-CCO46_RS14170;Parent=gene-CCO46_RS14170;Note=internal stop;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=CCO46_RS14170;product=RNA polymerase sigma factor RpoS;pseudo=true;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 66911 67147 . - . ID=gene-CCO46_RS14175;Name=CCO46_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14175;old_locus_tag=CCO46_14180 NZ_NPOH01000011.1 Protein Homology CDS 66911 67147 . - 0 ID=cds-WP_000562964.1;Parent=gene-CCO46_RS14175;Dbxref=GenBank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=CCO46_RS14175;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562964.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 67158 68585 . - . ID=gene-CCO46_RS14180;Name=CCO46_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14180;old_locus_tag=CCO46_14185 NZ_NPOH01000011.1 Protein Homology CDS 67158 68585 . - 0 ID=cds-WP_000863168.1;Parent=gene-CCO46_RS14180;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=CCO46_RS14180;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 68585 69178 . - . ID=gene-CCO46_RS14185;Name=CCO46_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14185;old_locus_tag=CCO46_14190 NZ_NPOH01000011.1 Protein Homology CDS 68585 69178 . - 0 ID=cds-WP_001237180.1;Parent=gene-CCO46_RS14185;Dbxref=GenBank:WP_001237180.1;Name=WP_001237180.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=CCO46_RS14185;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001237180.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 69349 69753 . + . ID=gene-CCO46_RS14190;Name=CCO46_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14190;old_locus_tag=CCO46_14195 NZ_NPOH01000011.1 Protein Homology CDS 69349 69753 . + 0 ID=cds-WP_000423338.1;Parent=gene-CCO46_RS14190;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=CCO46_RS14190;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 69772 70536 . - . ID=gene-CCO46_RS14195;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=CCO46_RS14195;old_locus_tag=CCO46_14200 NZ_NPOH01000011.1 Protein Homology CDS 69772 70536 . - 0 ID=cds-WP_097363368.1;Parent=gene-CCO46_RS14195;Dbxref=GenBank:WP_097363368.1;Name=WP_097363368.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=CCO46_RS14195;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_097363368.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 70733 71656 . + . ID=gene-CCO46_RS14200;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=CCO46_RS14200;old_locus_tag=CCO46_14205 NZ_NPOH01000011.1 Protein Homology CDS 70733 71656 . + 0 ID=cds-WP_000206958.1;Parent=gene-CCO46_RS14200;Dbxref=GenBank:WP_000206958.1;Name=WP_000206958.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=CCO46_RS14200;product=L-threonate dehydrogenase;protein_id=WP_000206958.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 71650 72912 . + . ID=gene-CCO46_RS14205;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=CCO46_RS14205;old_locus_tag=CCO46_14210 NZ_NPOH01000011.1 Protein Homology CDS 71650 72912 . + 0 ID=cds-WP_097363369.1;Parent=gene-CCO46_RS14205;Dbxref=GenBank:WP_097363369.1;Name=WP_097363369.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=CCO46_RS14205;product=3-oxo-tetronate kinase;protein_id=WP_097363369.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 72909 73547 . + . ID=gene-CCO46_RS14210;Name=CCO46_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14210;old_locus_tag=CCO46_14215 NZ_NPOH01000011.1 Protein Homology CDS 72909 73547 . + 0 ID=cds-WP_000153636.1;Parent=gene-CCO46_RS14210;Dbxref=GenBank:WP_000153636.1;Name=WP_000153636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=CCO46_RS14210;product=aldolase;protein_id=WP_000153636.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 73552 74328 . + . ID=gene-CCO46_RS14215;Name=CCO46_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14215;old_locus_tag=CCO46_14220 NZ_NPOH01000011.1 Protein Homology CDS 73552 74328 . + 0 ID=cds-WP_094887544.1;Parent=gene-CCO46_RS14215;Dbxref=GenBank:WP_094887544.1;Name=WP_094887544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=CCO46_RS14215;product=HPr family phosphocarrier protein;protein_id=WP_094887544.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 74368 75318 . + . ID=gene-CCO46_RS14220;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=CCO46_RS14220;old_locus_tag=CCO46_14225 NZ_NPOH01000011.1 Protein Homology CDS 74368 75318 . + 0 ID=cds-WP_001165727.1;Parent=gene-CCO46_RS14220;Dbxref=GenBank:WP_001165727.1;Name=WP_001165727.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=CCO46_RS14220;product=D-erythronate dehydrogenase;protein_id=WP_001165727.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 75315 76811 . + . ID=gene-CCO46_RS14225;Name=CCO46_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14225;old_locus_tag=CCO46_14230 NZ_NPOH01000011.1 Protein Homology CDS 75315 76811 . + 0 ID=cds-WP_000202725.1;Parent=gene-CCO46_RS14225;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=CCO46_RS14225;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 76853 77785 . - . ID=gene-CCO46_RS14230;Name=CCO46_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14230;old_locus_tag=CCO46_14235 NZ_NPOH01000011.1 Protein Homology CDS 76853 77785 . - 0 ID=cds-WP_072102872.1;Parent=gene-CCO46_RS14230;Dbxref=GenBank:WP_072102872.1;Name=WP_072102872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=CCO46_RS14230;product=LysR family transcriptional regulator;protein_id=WP_072102872.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 77873 79081 . + . ID=gene-CCO46_RS14235;Name=CCO46_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14235;old_locus_tag=CCO46_14240 NZ_NPOH01000011.1 Protein Homology CDS 77873 79081 . + 0 ID=cds-WP_097363370.1;Parent=gene-CCO46_RS14235;Dbxref=GenBank:WP_097363370.1;Name=WP_097363370.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=CCO46_RS14235;product=MFS transporter;protein_id=WP_097363370.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 79078 79458 . + . ID=gene-CCO46_RS14240;Name=CCO46_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14240;old_locus_tag=CCO46_14245 NZ_NPOH01000011.1 Protein Homology CDS 79078 79458 . + 0 ID=cds-WP_094887546.1;Parent=gene-CCO46_RS14240;Dbxref=GenBank:WP_094887546.1;Name=WP_094887546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=CCO46_RS14240;product=DUF4440 domain-containing protein;protein_id=WP_094887546.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 79514 82081 . - . ID=gene-CCO46_RS14245;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CCO46_RS14245;old_locus_tag=CCO46_14250 NZ_NPOH01000011.1 Protein Homology CDS 79514 82081 . - 0 ID=cds-WP_058331193.1;Parent=gene-CCO46_RS14245;Dbxref=GenBank:WP_058331193.1;Name=WP_058331193.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=CCO46_RS14245;product=DNA mismatch repair protein MutS;protein_id=WP_058331193.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 82239 82760 . + . ID=gene-CCO46_RS14250;Name=CCO46_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14250;old_locus_tag=CCO46_14255 NZ_NPOH01000011.1 Protein Homology CDS 82239 82760 . + 0 ID=cds-WP_015633084.1;Parent=gene-CCO46_RS14250;Dbxref=GenBank:WP_015633084.1;Name=WP_015633084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=CCO46_RS14250;product=hypothetical protein;protein_id=WP_015633084.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 82931 83587 . - . ID=gene-CCO46_RS14255;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=CCO46_RS14255;old_locus_tag=CCO46_14260 NZ_NPOH01000011.1 Protein Homology CDS 82931 83587 . - 0 ID=cds-WP_000420451.1;Parent=gene-CCO46_RS14255;Dbxref=GenBank:WP_000420451.1;Name=WP_000420451.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=CCO46_RS14255;product=protein-serine/threonine phosphatase;protein_id=WP_000420451.1;transl_table=11 NZ_NPOH01000011.1 RefSeq pseudogene 83814 84239 . + . ID=gene-CCO46_RS14260;Name=CCO46_RS14260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS14260;old_locus_tag=CCO46_14265;partial=true;pseudo=true;start_range=.,83814 NZ_NPOH01000011.1 Protein Homology CDS 83814 84239 . + 0 ID=cds-CCO46_RS14260;Parent=gene-CCO46_RS14260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=CCO46_RS14260;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,83814;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 84312 84839 . - . ID=gene-CCO46_RS14265;Name=CCO46_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14265;old_locus_tag=CCO46_14270 NZ_NPOH01000011.1 Protein Homology CDS 84312 84839 . - 0 ID=cds-WP_000971655.1;Parent=gene-CCO46_RS14265;Dbxref=GenBank:WP_000971655.1;Name=WP_000971655.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=CCO46_RS14265;product=GNAT family N-acetyltransferase;protein_id=WP_000971655.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 84836 85126 . - . ID=gene-CCO46_RS14270;Name=CCO46_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14270;old_locus_tag=CCO46_14275 NZ_NPOH01000011.1 Protein Homology CDS 84836 85126 . - 0 ID=cds-WP_000855694.1;Parent=gene-CCO46_RS14270;Dbxref=GenBank:WP_000855694.1;Name=WP_000855694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=CCO46_RS14270;product=DUF1778 domain-containing protein;protein_id=WP_000855694.1;transl_table=11 NZ_NPOH01000011.1 RefSeq pseudogene 85394 85594 . - . ID=gene-CCO46_RS14275;Name=CCO46_RS14275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS14275;old_locus_tag=CCO46_14280;partial=true;pseudo=true;start_range=.,85394 NZ_NPOH01000011.1 Protein Homology CDS 85394 85594 . - 0 ID=cds-CCO46_RS14275;Parent=gene-CCO46_RS14275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO46_RS14275;partial=true;product=transposase;pseudo=true;start_range=.,85394;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 85835 86161 . + . ID=gene-CCO46_RS14280;Name=CCO46_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14280;old_locus_tag=CCO46_14285 NZ_NPOH01000011.1 Protein Homology CDS 85835 86161 . + 0 ID=cds-WP_050067855.1;Parent=gene-CCO46_RS14280;Dbxref=GenBank:WP_050067855.1;Name=WP_050067855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=CCO46_RS14280;product=hypothetical protein;protein_id=WP_050067855.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 86434 86781 . - . ID=gene-CCO46_RS14285;Name=CCO46_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14285;old_locus_tag=CCO46_14290 NZ_NPOH01000011.1 Protein Homology CDS 86434 86781 . - 0 ID=cds-WP_001555786.1;Parent=gene-CCO46_RS14285;Dbxref=GenBank:WP_001555786.1;Name=WP_001555786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=CCO46_RS14285;product=DUF1493 family protein;protein_id=WP_001555786.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 86766 87215 . - . ID=gene-CCO46_RS14290;Name=CCO46_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14290;old_locus_tag=CCO46_14295 NZ_NPOH01000011.1 Protein Homology CDS 86766 87215 . - 0 ID=cds-WP_000381613.1;Parent=gene-CCO46_RS14290;Dbxref=GenBank:WP_000381613.1;Name=WP_000381613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=CCO46_RS14290;product=STM2901 family protein;protein_id=WP_000381613.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 87647 88090 . - . ID=gene-CCO46_RS14295;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=CCO46_RS14295;old_locus_tag=CCO46_14300 NZ_NPOH01000011.1 Protein Homology CDS 87647 88090 . - 0 ID=cds-WP_058331192.1;Parent=gene-CCO46_RS14295;Dbxref=GenBank:WP_058331192.1;Name=WP_058331192.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=CCO46_RS14295;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_058331192.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 88546 89196 . + . ID=gene-CCO46_RS14300;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=CCO46_RS14300;old_locus_tag=CCO46_14305 NZ_NPOH01000011.1 Protein Homology CDS 88546 89196 . + 0 ID=cds-WP_001674874.1;Parent=gene-CCO46_RS14300;Dbxref=GenBank:WP_001674874.1;Name=WP_001674874.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=CCO46_RS14300;product=type III secretion system transcriptional activator InvF;protein_id=WP_001674874.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 89193 90881 . + . ID=gene-CCO46_RS14305;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=CCO46_RS14305;old_locus_tag=CCO46_14310 NZ_NPOH01000011.1 Protein Homology CDS 89193 90881 . + 0 ID=cds-WP_000848113.1;Parent=gene-CCO46_RS14305;Dbxref=GenBank:WP_000848113.1;Name=WP_000848113.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=CCO46_RS14305;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848113.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 90878 91996 . + . ID=gene-CCO46_RS14310;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=CCO46_RS14310;old_locus_tag=CCO46_14315 NZ_NPOH01000011.1 Protein Homology CDS 90878 91996 . + 0 ID=cds-WP_000612171.1;Parent=gene-CCO46_RS14310;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=CCO46_RS14310;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 92021 94078 . + . ID=gene-CCO46_RS14315;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=CCO46_RS14315;old_locus_tag=CCO46_14320 NZ_NPOH01000011.1 Protein Homology CDS 92021 94078 . + 0 ID=cds-WP_000927219.1;Parent=gene-CCO46_RS14315;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=CCO46_RS14315;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 94102 94509 . + . ID=gene-CCO46_RS14320;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=CCO46_RS14320;old_locus_tag=CCO46_14325 NZ_NPOH01000011.1 Protein Homology CDS 94102 94509 . + 0 ID=cds-WP_001164066.1;Parent=gene-CCO46_RS14320;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=CCO46_RS14320;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 94506 95801 . + . ID=gene-CCO46_RS14325;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=CCO46_RS14325;old_locus_tag=CCO46_14330 NZ_NPOH01000011.1 Protein Homology CDS 94506 95801 . + 0 ID=cds-WP_097363371.1;Parent=gene-CCO46_RS14325;Dbxref=GenBank:WP_097363371.1;Name=WP_097363371.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=CCO46_RS14325;product=SctN family type III secretion system ATPase InvC;protein_id=WP_097363371.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 95779 96222 . + . ID=gene-CCO46_RS14330;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=CCO46_RS14330;old_locus_tag=CCO46_14335 NZ_NPOH01000011.1 Protein Homology CDS 95779 96222 . + 0 ID=cds-WP_000555884.1;Parent=gene-CCO46_RS14330;Dbxref=GenBank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=CCO46_RS14330;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 96222 97232 . + . ID=gene-CCO46_RS14335;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=CCO46_RS14335;old_locus_tag=CCO46_14340 NZ_NPOH01000011.1 Protein Homology CDS 96222 97232 . + 0 ID=cds-WP_058331191.1;Parent=gene-CCO46_RS14335;Dbxref=GenBank:WP_058331191.1;Name=WP_058331191.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=CCO46_RS14335;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_058331191.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 97232 98143 . + . ID=gene-CCO46_RS14340;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=CCO46_RS14340;old_locus_tag=CCO46_14345 NZ_NPOH01000011.1 Protein Homology CDS 97232 98143 . + 0 ID=cds-WP_000058734.1;Parent=gene-CCO46_RS14340;Dbxref=GenBank:WP_000058734.1;Name=WP_000058734.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=CCO46_RS14340;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058734.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 98133 98807 . + . ID=gene-CCO46_RS14345;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=CCO46_RS14345;old_locus_tag=CCO46_14350 NZ_NPOH01000011.1 Protein Homology CDS 98133 98807 . + 0 ID=cds-WP_000526016.1;Parent=gene-CCO46_RS14345;Dbxref=GenBank:WP_000526016.1;Name=WP_000526016.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=CCO46_RS14345;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526016.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 98833 99093 . + . ID=gene-CCO46_RS14350;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=CCO46_RS14350;old_locus_tag=CCO46_14355 NZ_NPOH01000011.1 Protein Homology CDS 98833 99093 . + 0 ID=cds-WP_000342503.1;Parent=gene-CCO46_RS14350;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=CCO46_RS14350;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 99097 99888 . + . ID=gene-CCO46_RS14355;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=CCO46_RS14355;old_locus_tag=CCO46_14360 NZ_NPOH01000011.1 Protein Homology CDS 99097 99888 . + 0 ID=cds-WP_000498965.1;Parent=gene-CCO46_RS14355;Dbxref=GenBank:WP_000498965.1;Name=WP_000498965.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=CCO46_RS14355;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000498965.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 99875 100945 . + . ID=gene-CCO46_RS14360;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=CCO46_RS14360;old_locus_tag=CCO46_14365 NZ_NPOH01000011.1 Protein Homology CDS 99875 100945 . + 0 ID=cds-WP_000097719.1;Parent=gene-CCO46_RS14360;Dbxref=GenBank:WP_000097719.1;Name=WP_000097719.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=CCO46_RS14360;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097719.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 101083 101580 . + . ID=gene-CCO46_RS14365;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=CCO46_RS14365;old_locus_tag=CCO46_14370 NZ_NPOH01000011.1 Protein Homology CDS 101083 101580 . + 0 ID=cds-WP_000386309.1;Parent=gene-CCO46_RS14365;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=CCO46_RS14365;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 101583 103364 . + . ID=gene-CCO46_RS14370;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=CCO46_RS14370;old_locus_tag=CCO46_14375 NZ_NPOH01000011.1 Protein Homology CDS 101583 103364 . + 0 ID=cds-WP_058331190.1;Parent=gene-CCO46_RS14370;Dbxref=GenBank:WP_058331190.1;Name=WP_058331190.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=CCO46_RS14370;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_058331190.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 103392 104621 . + . ID=gene-CCO46_RS14375;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=CCO46_RS14375;old_locus_tag=CCO46_14380 NZ_NPOH01000011.1 Protein Homology CDS 103392 104621 . + 0 ID=cds-WP_000909019.1;Parent=gene-CCO46_RS14375;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=CCO46_RS14375;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 104692 105723 . + . ID=gene-CCO46_RS14380;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=CCO46_RS14380;old_locus_tag=CCO46_14385 NZ_NPOH01000011.1 Protein Homology CDS 104692 105723 . + 0 ID=cds-WP_058331189.1;Parent=gene-CCO46_RS14380;Dbxref=GenBank:WP_058331189.1;Name=WP_058331189.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=CCO46_RS14380;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_058331189.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 105742 107787 . + . ID=gene-CCO46_RS14385;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=CCO46_RS14385;old_locus_tag=CCO46_14390 NZ_NPOH01000011.1 Protein Homology CDS 105742 107787 . + 0 ID=cds-WP_058331188.1;Parent=gene-CCO46_RS14385;Dbxref=GenBank:WP_058331188.1;Name=WP_058331188.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=CCO46_RS14385;product=SPI-1 type III secretion system effector SipA;protein_id=WP_058331188.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 107806 108054 . + . ID=gene-CCO46_RS14390;Name=CCO46_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14390;old_locus_tag=CCO46_14395 NZ_NPOH01000011.1 Protein Homology CDS 107806 108054 . + 0 ID=cds-WP_023227559.1;Parent=gene-CCO46_RS14390;Dbxref=GenBank:WP_023227559.1;Name=WP_023227559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055583.1;locus_tag=CCO46_RS14390;product=acyl carrier protein;protein_id=WP_023227559.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 108098 108358 . + . ID=gene-CCO46_RS14395;Name=CCO46_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14395;old_locus_tag=CCO46_14400 NZ_NPOH01000011.1 Protein Homology CDS 108098 108358 . + 0 ID=cds-WP_076727070.1;Parent=gene-CCO46_RS14395;Dbxref=GenBank:WP_076727070.1;Name=WP_076727070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=CCO46_RS14395;product=hypothetical protein;protein_id=WP_076727070.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 108385 108777 . + . ID=gene-CCO46_RS14400;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=CCO46_RS14400;old_locus_tag=CCO46_14405 NZ_NPOH01000011.1 Protein Homology CDS 108385 108777 . + 0 ID=cds-WP_058331185.1;Parent=gene-CCO46_RS14400;Dbxref=GenBank:WP_058331185.1;Name=WP_058331185.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=CCO46_RS14400;product=chaperone SicP;protein_id=WP_058331185.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 108764 110395 . + . ID=gene-CCO46_RS14405;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=CCO46_RS14405;old_locus_tag=CCO46_14410 NZ_NPOH01000011.1 Protein Homology CDS 108764 110395 . + 0 ID=cds-WP_076727068.1;Parent=gene-CCO46_RS14405;Dbxref=GenBank:WP_076727068.1;Name=WP_076727068.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=CCO46_RS14405;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_076727068.1;transl_table=11 NZ_NPOH01000011.1 RefSeq pseudogene 110477 111684 . + . ID=gene-CCO46_RS14410;Name=CCO46_RS14410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS14410;old_locus_tag=CCO46_14415;pseudo=true NZ_NPOH01000011.1 Protein Homology CDS 110477 111684 . + 0 ID=cds-CCO46_RS14410;Parent=gene-CCO46_RS14410;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO46_RS14410;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 111770 112252 . - . ID=gene-CCO46_RS14415;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=CCO46_RS14415;old_locus_tag=CCO46_14420 NZ_NPOH01000011.1 Protein Homology CDS 111770 112252 . - 0 ID=cds-WP_058331181.1;Parent=gene-CCO46_RS14415;Dbxref=GenBank:WP_058331181.1;Name=WP_058331181.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=CCO46_RS14415;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_058331181.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 112270 113931 . - . ID=gene-CCO46_RS14420;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=CCO46_RS14420;old_locus_tag=CCO46_14425 NZ_NPOH01000011.1 Protein Homology CDS 112270 113931 . - 0 ID=cds-WP_058331180.1;Parent=gene-CCO46_RS14420;Dbxref=GenBank:WP_058331180.1;Name=WP_058331180.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=CCO46_RS14420;product=transcriptional regulator HilA;protein_id=WP_058331180.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 115023 115952 . - . ID=gene-CCO46_RS14425;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=CCO46_RS14425;old_locus_tag=CCO46_14430 NZ_NPOH01000011.1 Protein Homology CDS 115023 115952 . - 0 ID=cds-WP_076727066.1;Parent=gene-CCO46_RS14425;Dbxref=GenBank:WP_076727066.1;Name=WP_076727066.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=CCO46_RS14425;product=transcriptional regulator HilD;protein_id=WP_076727066.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 116268 117446 . + . ID=gene-CCO46_RS14430;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=CCO46_RS14430;old_locus_tag=CCO46_14435 NZ_NPOH01000011.1 Protein Homology CDS 116268 117446 . + 0 ID=cds-WP_058331198.1;Parent=gene-CCO46_RS14430;Dbxref=GenBank:WP_058331198.1;Name=WP_058331198.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=CCO46_RS14430;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_058331198.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 117471 117713 . + . ID=gene-CCO46_RS14435;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=CCO46_RS14435;old_locus_tag=CCO46_14440 NZ_NPOH01000011.1 Protein Homology CDS 117471 117713 . + 0 ID=cds-WP_001143300.1;Parent=gene-CCO46_RS14435;Dbxref=GenBank:WP_001143300.1;Name=WP_001143300.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=CCO46_RS14435;product=type III secretion system needle filament protein PrgI;protein_id=WP_001143300.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 117732 118037 . + . ID=gene-CCO46_RS14440;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=CCO46_RS14440;old_locus_tag=CCO46_14445 NZ_NPOH01000011.1 Protein Homology CDS 117732 118037 . + 0 ID=cds-WP_000020427.1;Parent=gene-CCO46_RS14440;Dbxref=GenBank:WP_000020427.1;Name=WP_000020427.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=CCO46_RS14440;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020427.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 118034 118792 . + . ID=gene-CCO46_RS14445;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=CCO46_RS14445;old_locus_tag=CCO46_14450 NZ_NPOH01000011.1 Protein Homology CDS 118034 118792 . + 0 ID=cds-WP_000621238.1;Parent=gene-CCO46_RS14445;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=CCO46_RS14445;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 118764 119363 . + . ID=gene-CCO46_RS14450;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=CCO46_RS14450;old_locus_tag=CCO46_14455 NZ_NPOH01000011.1 Protein Homology CDS 118764 119363 . + 0 ID=cds-WP_078057680.1;Parent=gene-CCO46_RS14450;Dbxref=GenBank:WP_078057680.1;Name=WP_078057680.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=CCO46_RS14450;product=oxygen-regulated invasion protein OrgA;protein_id=WP_078057680.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 119320 119991 . + . ID=gene-CCO46_RS14455;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=CCO46_RS14455;old_locus_tag=CCO46_14460 NZ_NPOH01000011.1 Protein Homology CDS 119320 119991 . + 0 ID=cds-WP_076727064.1;Parent=gene-CCO46_RS14455;Dbxref=GenBank:WP_076727064.1;Name=WP_076727064.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835247.1;locus_tag=CCO46_RS14455;product=type III secretion system linker protein OrgB;protein_id=WP_076727064.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 120007 120459 . + . ID=gene-CCO46_RS14460;Name=CCO46_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14460;old_locus_tag=CCO46_14465 NZ_NPOH01000011.1 Protein Homology CDS 120007 120459 . + 0 ID=cds-WP_058331177.1;Parent=gene-CCO46_RS14460;Dbxref=GenBank:WP_058331177.1;Name=WP_058331177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=CCO46_RS14460;product=type III secretion system effector protein OrgC;protein_id=WP_058331177.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 120804 121691 . + . ID=gene-CCO46_RS14465;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=CCO46_RS14465;old_locus_tag=CCO46_14470 NZ_NPOH01000011.1 Protein Homology CDS 120804 121691 . + 0 ID=cds-WP_097363372.1;Parent=gene-CCO46_RS14465;Dbxref=GenBank:WP_097363372.1;Name=WP_097363372.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=CCO46_RS14465;product=invasion transcriptional regulator HilC;protein_id=WP_097363372.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 122076 122831 . + . ID=gene-CCO46_RS14475;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=CCO46_RS14475;old_locus_tag=CCO46_14475 NZ_NPOH01000011.1 Protein Homology CDS 122076 122831 . + 0 ID=cds-WP_058331175.1;Parent=gene-CCO46_RS14475;Dbxref=GenBank:WP_058331175.1;Name=WP_058331175.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=CCO46_RS14475;product=transcriptional regulator SprB;protein_id=WP_058331175.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 123108 123956 . - . ID=gene-CCO46_RS14485;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=CCO46_RS14485;old_locus_tag=CCO46_14485 NZ_NPOH01000011.1 Protein Homology CDS 123108 123956 . - 0 ID=cds-WP_058331174.1;Parent=gene-CCO46_RS14485;Dbxref=GenBank:WP_058331174.1;Name=WP_058331174.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=CCO46_RS14485;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_058331174.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 123947 124807 . - . ID=gene-CCO46_RS14490;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=CCO46_RS14490;old_locus_tag=CCO46_14490 NZ_NPOH01000011.1 Protein Homology CDS 123947 124807 . - 0 ID=cds-WP_001104336.1;Parent=gene-CCO46_RS14490;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=CCO46_RS14490;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 124804 125625 . - . ID=gene-CCO46_RS14495;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=CCO46_RS14495;old_locus_tag=CCO46_14495 NZ_NPOH01000011.1 Protein Homology CDS 124804 125625 . - 0 ID=cds-WP_058331173.1;Parent=gene-CCO46_RS14495;Dbxref=GenBank:WP_058331173.1;Name=WP_058331173.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=CCO46_RS14495;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_058331173.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 125622 126539 . - . ID=gene-CCO46_RS14500;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=CCO46_RS14500;old_locus_tag=CCO46_14500 NZ_NPOH01000011.1 Protein Homology CDS 125622 126539 . - 0 ID=cds-WP_000182930.1;Parent=gene-CCO46_RS14500;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=CCO46_RS14500;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 126721 127065 . + . ID=gene-CCO46_RS14505;Name=CCO46_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14505;old_locus_tag=CCO46_14505 NZ_NPOH01000011.1 Protein Homology CDS 126721 127065 . + 0 ID=cds-WP_001117944.1;Parent=gene-CCO46_RS14505;Dbxref=GenBank:WP_001117944.1;Name=WP_001117944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=CCO46_RS14505;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117944.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 127127 129205 . - . ID=gene-CCO46_RS14510;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO46_RS14510;old_locus_tag=CCO46_14510 NZ_NPOH01000011.1 Protein Homology CDS 127127 129205 . - 0 ID=cds-WP_000122692.1;Parent=gene-CCO46_RS14510;Dbxref=GenBank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=CCO46_RS14510;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 129424 130434 . - . ID=gene-CCO46_RS14515;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=CCO46_RS14515;old_locus_tag=CCO46_14515 NZ_NPOH01000011.1 Protein Homology CDS 129424 130434 . - 0 ID=cds-WP_001059959.1;Parent=gene-CCO46_RS14515;Dbxref=GenBank:WP_001059959.1;Name=WP_001059959.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=CCO46_RS14515;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059959.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 130431 131552 . - . ID=gene-CCO46_RS14520;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=CCO46_RS14520;old_locus_tag=CCO46_14520 NZ_NPOH01000011.1 Protein Homology CDS 130431 131552 . - 0 ID=cds-WP_001212956.1;Parent=gene-CCO46_RS14520;Dbxref=GenBank:WP_001212956.1;Name=WP_001212956.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=CCO46_RS14520;product=hydrogenase formation protein HypD;protein_id=WP_001212956.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 131552 131824 . - . ID=gene-CCO46_RS14525;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO46_RS14525;old_locus_tag=CCO46_14525 NZ_NPOH01000011.1 Protein Homology CDS 131552 131824 . - 0 ID=cds-WP_000334871.1;Parent=gene-CCO46_RS14525;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=CCO46_RS14525;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 131815 132687 . - . ID=gene-CCO46_RS14530;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=CCO46_RS14530;old_locus_tag=CCO46_14530 NZ_NPOH01000011.1 Protein Homology CDS 131815 132687 . - 0 ID=cds-WP_000337640.1;Parent=gene-CCO46_RS14530;Dbxref=GenBank:WP_000337640.1;Name=WP_000337640.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=CCO46_RS14530;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337640.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 132756 133112 . - . ID=gene-CCO46_RS14535;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO46_RS14535;old_locus_tag=CCO46_14535 NZ_NPOH01000011.1 Protein Homology CDS 132756 133112 . - 0 ID=cds-WP_000544461.1;Parent=gene-CCO46_RS14535;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=CCO46_RS14535;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 133322 133783 . + . ID=gene-CCO46_RS14545;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=CCO46_RS14545;old_locus_tag=CCO46_14545 NZ_NPOH01000011.1 Protein Homology CDS 133322 133783 . + 0 ID=cds-WP_000158073.1;Parent=gene-CCO46_RS14545;Dbxref=GenBank:WP_000158073.1;Name=WP_000158073.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=CCO46_RS14545;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158073.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 133929 134537 . + . ID=gene-CCO46_RS14550;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=CCO46_RS14550;old_locus_tag=CCO46_14550 NZ_NPOH01000011.1 Protein Homology CDS 133929 134537 . + 0 ID=cds-WP_001079163.1;Parent=gene-CCO46_RS14550;Dbxref=GenBank:WP_001079163.1;Name=WP_001079163.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=CCO46_RS14550;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079163.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 134537 136363 . + . ID=gene-CCO46_RS14555;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=CCO46_RS14555;old_locus_tag=CCO46_14555 NZ_NPOH01000011.1 Protein Homology CDS 134537 136363 . + 0 ID=cds-WP_000097037.1;Parent=gene-CCO46_RS14555;Dbxref=GenBank:WP_000097037.1;Name=WP_000097037.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=CCO46_RS14555;product=formate hydrogenlyase subunit 3;protein_id=WP_000097037.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 136366 137289 . + . ID=gene-CCO46_RS14560;Name=CCO46_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14560;old_locus_tag=CCO46_14560 NZ_NPOH01000011.1 Protein Homology CDS 136366 137289 . + 0 ID=cds-WP_058331172.1;Parent=gene-CCO46_RS14560;Dbxref=GenBank:WP_058331172.1;Name=WP_058331172.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=CCO46_RS14560;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_058331172.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 137307 139016 . + . ID=gene-CCO46_RS14565;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=CCO46_RS14565;old_locus_tag=CCO46_14565 NZ_NPOH01000011.1 Protein Homology CDS 137307 139016 . + 0 ID=cds-WP_001288155.1;Parent=gene-CCO46_RS14565;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=CCO46_RS14565;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 139026 139568 . + . ID=gene-CCO46_RS14570;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=CCO46_RS14570;old_locus_tag=CCO46_14570 NZ_NPOH01000011.1 Protein Homology CDS 139026 139568 . + 0 ID=cds-WP_000493767.1;Parent=gene-CCO46_RS14570;Dbxref=GenBank:WP_000493767.1;Name=WP_000493767.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=CCO46_RS14570;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493767.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 139568 140335 . + . ID=gene-CCO46_RS14575;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=CCO46_RS14575;old_locus_tag=CCO46_14575 NZ_NPOH01000011.1 Protein Homology CDS 139568 140335 . + 0 ID=cds-WP_000067419.1;Parent=gene-CCO46_RS14575;Dbxref=GenBank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=CCO46_RS14575;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 140332 140742 . + . ID=gene-CCO46_RS14580;Name=CCO46_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14580;old_locus_tag=CCO46_14580 NZ_NPOH01000011.1 Protein Homology CDS 140332 140742 . + 0 ID=cds-WP_000003725.1;Parent=gene-CCO46_RS14580;Dbxref=GenBank:WP_000003725.1;Name=WP_000003725.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=CCO46_RS14580;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003725.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 140735 141205 . + . ID=gene-CCO46_RS14585;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=CCO46_RS14585;old_locus_tag=CCO46_14585 NZ_NPOH01000011.1 Protein Homology CDS 140735 141205 . + 0 ID=cds-WP_058331171.1;Parent=gene-CCO46_RS14585;Dbxref=GenBank:WP_058331171.1;Name=WP_058331171.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=CCO46_RS14585;product=hydrogenase maturation peptidase HycI;protein_id=WP_058331171.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 141232 142041 . + . ID=gene-CCO46_RS14590;Name=CCO46_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14590;old_locus_tag=CCO46_14590 NZ_NPOH01000011.1 Protein Homology CDS 141232 142041 . + 0 ID=cds-WP_058331170.1;Parent=gene-CCO46_RS14590;Dbxref=GenBank:WP_058331170.1;Name=WP_058331170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=CCO46_RS14590;product=hypothetical protein;protein_id=WP_058331170.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 142242 142787 . + . ID=gene-CCO46_RS14595;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=CCO46_RS14595;old_locus_tag=CCO46_14595 NZ_NPOH01000011.1 Protein Homology CDS 142242 142787 . + 0 ID=cds-WP_001078791.1;Parent=gene-CCO46_RS14595;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=CCO46_RS14595;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 142933 145173 . + . ID=gene-CCO46_RS14600;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=CCO46_RS14600;old_locus_tag=CCO46_14600 NZ_NPOH01000011.1 Protein Homology CDS 142933 145173 . + 0 ID=cds-WP_058331169.1;Parent=gene-CCO46_RS14600;Dbxref=GenBank:WP_058331169.1;Name=WP_058331169.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=CCO46_RS14600;product=carbamoyltransferase HypF;protein_id=WP_058331169.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 145270 146403 . - . ID=gene-CCO46_RS14605;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=CCO46_RS14605;old_locus_tag=CCO46_14605 NZ_NPOH01000011.1 Protein Homology CDS 145270 146403 . - 0 ID=cds-WP_023202132.1;Parent=gene-CCO46_RS14605;Dbxref=GenBank:WP_023202132.1;Name=WP_023202132.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=CCO46_RS14605;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_023202132.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 146400 147839 . - . ID=gene-CCO46_RS14610;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=CCO46_RS14610;old_locus_tag=CCO46_14610 NZ_NPOH01000011.1 Protein Homology CDS 146400 147839 . - 0 ID=cds-WP_000026011.1;Parent=gene-CCO46_RS14610;Dbxref=GenBank:WP_000026011.1;Name=WP_000026011.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=CCO46_RS14610;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000026011.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 148025 149545 . + . ID=gene-CCO46_RS14615;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=CCO46_RS14615;old_locus_tag=CCO46_14615 NZ_NPOH01000011.1 Protein Homology CDS 148025 149545 . + 0 ID=cds-WP_000010814.1;Parent=gene-CCO46_RS14615;Dbxref=GenBank:WP_000010814.1;Name=WP_000010814.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=CCO46_RS14615;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010814.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 149542 150507 . - . ID=gene-CCO46_RS14620;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=CCO46_RS14620;old_locus_tag=CCO46_14620 NZ_NPOH01000011.1 Protein Homology CDS 149542 150507 . - 0 ID=cds-WP_058331168.1;Parent=gene-CCO46_RS14620;Dbxref=GenBank:WP_058331168.1;Name=WP_058331168.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=CCO46_RS14620;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_058331168.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 150500 151273 . - . ID=gene-CCO46_RS14625;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=CCO46_RS14625;old_locus_tag=CCO46_14625 NZ_NPOH01000011.1 Protein Homology CDS 150500 151273 . - 0 ID=cds-WP_000804536.1;Parent=gene-CCO46_RS14625;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=CCO46_RS14625;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 151471 151830 . - . ID=gene-CCO46_RS14630;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=CCO46_RS14630;old_locus_tag=CCO46_14630 NZ_NPOH01000011.1 Protein Homology CDS 151471 151830 . - 0 ID=cds-WP_000255198.1;Parent=gene-CCO46_RS14630;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=CCO46_RS14630;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 151907 152686 . - . ID=gene-CCO46_RS14635;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=CCO46_RS14635;old_locus_tag=CCO46_14635 NZ_NPOH01000011.1 Protein Homology CDS 151907 152686 . - 0 ID=cds-WP_001077372.1;Parent=gene-CCO46_RS14635;Dbxref=GenBank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=CCO46_RS14635;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 152698 153060 . - . ID=gene-CCO46_RS14640;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=CCO46_RS14640;old_locus_tag=CCO46_14640 NZ_NPOH01000011.1 Protein Homology CDS 152698 153060 . - 0 ID=cds-WP_000111553.1;Parent=gene-CCO46_RS14640;Dbxref=GenBank:WP_000111553.1;Name=WP_000111553.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=CCO46_RS14640;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111553.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 153072 154043 . - . ID=gene-CCO46_RS14645;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=CCO46_RS14645;old_locus_tag=CCO46_14645 NZ_NPOH01000011.1 Protein Homology CDS 153072 154043 . - 0 ID=cds-WP_058331167.1;Parent=gene-CCO46_RS14645;Dbxref=GenBank:WP_058331167.1;Name=WP_058331167.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=CCO46_RS14645;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_058331167.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 154040 154603 . - . ID=gene-CCO46_RS14650;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=CCO46_RS14650;old_locus_tag=CCO46_14650 NZ_NPOH01000011.1 Protein Homology CDS 154040 154603 . - 0 ID=cds-WP_000573333.1;Parent=gene-CCO46_RS14650;Dbxref=GenBank:WP_000573333.1;Name=WP_000573333.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=CCO46_RS14650;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573333.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 154856 155935 . + . ID=gene-CCO46_RS14655;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=CCO46_RS14655;old_locus_tag=CCO46_14655 NZ_NPOH01000011.1 Protein Homology CDS 154856 155935 . + 0 ID=cds-WP_058331166.1;Parent=gene-CCO46_RS14655;Dbxref=GenBank:WP_058331166.1;Name=WP_058331166.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=CCO46_RS14655;product=lytic murein transglycosylase B;protein_id=WP_058331166.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 155973 156218 . - . ID=gene-CCO46_RS25500;Name=CCO46_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25500;old_locus_tag=CCO46_14660 NZ_NPOH01000011.1 Protein Homology CDS 155973 156218 . - 0 ID=cds-WP_000053777.1;Parent=gene-CCO46_RS25500;Dbxref=GenBank:WP_000053777.1;Name=WP_000053777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=CCO46_RS25500;product=hypothetical protein;protein_id=WP_000053777.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 156414 156911 . + . ID=gene-CCO46_RS14665;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=CCO46_RS14665;old_locus_tag=CCO46_14665 NZ_NPOH01000011.1 Protein Homology CDS 156414 156911 . + 0 ID=cds-WP_000132239.1;Parent=gene-CCO46_RS14665;Dbxref=GenBank:WP_000132239.1;Name=WP_000132239.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=CCO46_RS14665;product=nicotinamide-nucleotide amidase;protein_id=WP_000132239.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 156996 158057 . + . ID=gene-CCO46_RS14670;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CCO46_RS14670;old_locus_tag=CCO46_14670 NZ_NPOH01000011.1 Protein Homology CDS 156996 158057 . + 0 ID=cds-WP_000963150.1;Parent=gene-CCO46_RS14670;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=CCO46_RS14670;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 158174 158674 . + . ID=gene-CCO46_RS14675;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CCO46_RS14675;old_locus_tag=CCO46_14675 NZ_NPOH01000011.1 Protein Homology CDS 158174 158674 . + 0 ID=cds-WP_001294863.1;Parent=gene-CCO46_RS14675;Dbxref=GenBank:WP_001294863.1;Name=WP_001294863.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=CCO46_RS14675;product=recombination regulator RecX;protein_id=WP_001294863.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 158910 161540 . + . ID=gene-CCO46_RS14685;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CCO46_RS14685;old_locus_tag=CCO46_14685 NZ_NPOH01000011.1 Protein Homology CDS 158910 161540 . + 0 ID=cds-WP_023232043.1;Parent=gene-CCO46_RS14685;Dbxref=GenBank:WP_023232043.1;Name=WP_023232043.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=CCO46_RS14685;product=alanine--tRNA ligase;protein_id=WP_023232043.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 161775 161960 . + . ID=gene-CCO46_RS14690;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=CCO46_RS14690;old_locus_tag=CCO46_14690 NZ_NPOH01000011.1 Protein Homology CDS 161775 161960 . + 0 ID=cds-WP_000906486.1;Parent=gene-CCO46_RS14690;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=CCO46_RS14690;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_NPOH01000011.1 RefSeq gene 162264 162356 . + . ID=gene-CCO46_RS14700;Name=CCO46_RS14700;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS14700;old_locus_tag=CCO46_14700 NZ_NPOH01000011.1 tRNAscan-SE tRNA 162264 162356 . + . ID=rna-CCO46_RS14700;Parent=gene-CCO46_RS14700;anticodon=(pos:162298..162300);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS14700;product=tRNA-Ser NZ_NPOH01000011.1 tRNAscan-SE exon 162264 162356 . + . ID=exon-CCO46_RS14700-1;Parent=rna-CCO46_RS14700;anticodon=(pos:162298..162300);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS14700;product=tRNA-Ser NZ_NPOH01000011.1 RefSeq gene 162360 162436 . + . ID=gene-CCO46_RS14705;Name=CCO46_RS14705;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS14705;old_locus_tag=CCO46_14705 NZ_NPOH01000011.1 tRNAscan-SE tRNA 162360 162436 . + . ID=rna-CCO46_RS14705;Parent=gene-CCO46_RS14705;anticodon=(pos:162394..162396);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS14705;product=tRNA-Arg NZ_NPOH01000011.1 tRNAscan-SE exon 162360 162436 . + . ID=exon-CCO46_RS14705-1;Parent=rna-CCO46_RS14705;anticodon=(pos:162394..162396);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS14705;product=tRNA-Arg NZ_NPOH01000011.1 RefSeq gene 162498 162574 . + . ID=gene-CCO46_RS14710;Name=CCO46_RS14710;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS14710;old_locus_tag=CCO46_14710 NZ_NPOH01000011.1 tRNAscan-SE tRNA 162498 162574 . + . ID=rna-CCO46_RS14710;Parent=gene-CCO46_RS14710;anticodon=(pos:162532..162534);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS14710;product=tRNA-Arg NZ_NPOH01000011.1 tRNAscan-SE exon 162498 162574 . + . ID=exon-CCO46_RS14710-1;Parent=rna-CCO46_RS14710;anticodon=(pos:162532..162534);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS14710;product=tRNA-Arg ##sequence-region NZ_NPOH01000012.1 1 160382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000012.1 RefSeq region 1 160382 . + . ID=NZ_NPOH01000012.1:1..160382;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000012.1 RefSeq gene 505 3078 . - . ID=gene-CCO46_RS14725;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CCO46_RS14725;old_locus_tag=CCO46_14725 NZ_NPOH01000012.1 Protein Homology CDS 505 3078 . - 0 ID=cds-WP_001235092.1;Parent=gene-CCO46_RS14725;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=CCO46_RS14725;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 3208 3939 . - . ID=gene-CCO46_RS14730;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=CCO46_RS14730;old_locus_tag=CCO46_14730 NZ_NPOH01000012.1 Protein Homology CDS 3208 3939 . - 0 ID=cds-WP_000992643.1;Parent=gene-CCO46_RS14730;Dbxref=GenBank:WP_000992643.1;Name=WP_000992643.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=CCO46_RS14730;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992643.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 3936 4916 . - . ID=gene-CCO46_RS14735;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=CCO46_RS14735;old_locus_tag=CCO46_14735 NZ_NPOH01000012.1 Protein Homology CDS 3936 4916 . - 0 ID=cds-WP_000079130.1;Parent=gene-CCO46_RS14735;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=CCO46_RS14735;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 5048 5785 . + . ID=gene-CCO46_RS14740;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=CCO46_RS14740;old_locus_tag=CCO46_14740 NZ_NPOH01000012.1 Protein Homology CDS 5048 5785 . + 0 ID=cds-WP_000197660.1;Parent=gene-CCO46_RS14740;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=CCO46_RS14740;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 6057 6395 . + . ID=gene-CCO46_RS14745;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CCO46_RS14745;old_locus_tag=CCO46_14745 NZ_NPOH01000012.1 Protein Homology CDS 6057 6395 . + 0 ID=cds-WP_000178449.1;Parent=gene-CCO46_RS14745;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=CCO46_RS14745;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11 NZ_NPOH01000012.1 cmsearch sequence_feature 6498 6623 . + . ID=id-NZ_NPOH01000012.1:6498..6623;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPOH01000012.1 RefSeq gene 6499 6546 . + . ID=gene-CCO46_RS24965;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=CCO46_RS24965 NZ_NPOH01000012.1 Protein Homology CDS 6499 6546 . + 0 ID=cds-WP_010989056.1;Parent=gene-CCO46_RS24965;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=CCO46_RS24965;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 6646 7806 . + . ID=gene-CCO46_RS14750;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=CCO46_RS14750;old_locus_tag=CCO46_14750 NZ_NPOH01000012.1 Protein Homology CDS 6646 7806 . + 0 ID=cds-WP_058331158.1;Parent=gene-CCO46_RS14750;Dbxref=GenBank:WP_058331158.1;Name=WP_058331158.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=CCO46_RS14750;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_058331158.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 7767 8675 . - . ID=gene-CCO46_RS14755;Name=CCO46_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14755;old_locus_tag=CCO46_14755 NZ_NPOH01000012.1 Protein Homology CDS 7767 8675 . - 0 ID=cds-WP_058331159.1;Parent=gene-CCO46_RS14755;Dbxref=GenBank:WP_058331159.1;Name=WP_058331159.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=CCO46_RS14755;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_058331159.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 8733 9854 . - . ID=gene-CCO46_RS14760;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=CCO46_RS14760;old_locus_tag=CCO46_14760 NZ_NPOH01000012.1 Protein Homology CDS 8733 9854 . - 0 ID=cds-WP_000225191.1;Parent=gene-CCO46_RS14760;Dbxref=GenBank:WP_000225191.1;Name=WP_000225191.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=CCO46_RS14760;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225191.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 9864 10934 . - . ID=gene-CCO46_RS14765;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=CCO46_RS14765;old_locus_tag=CCO46_14765 NZ_NPOH01000012.1 Protein Homology CDS 9864 10934 . - 0 ID=cds-WP_001168062.1;Parent=gene-CCO46_RS14765;Dbxref=GenBank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=CCO46_RS14765;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 11374 11892 . + . ID=gene-CCO46_RS14770;Name=CCO46_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14770;old_locus_tag=CCO46_14770 NZ_NPOH01000012.1 Protein Homology CDS 11374 11892 . + 0 ID=cds-WP_001212379.1;Parent=gene-CCO46_RS14770;Dbxref=GenBank:WP_001212379.1;Name=WP_001212379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=CCO46_RS14770;product=YfiR family protein;protein_id=WP_001212379.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 11885 13105 . + . ID=gene-CCO46_RS14775;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=CCO46_RS14775;old_locus_tag=CCO46_14775 NZ_NPOH01000012.1 Protein Homology CDS 11885 13105 . + 0 ID=cds-WP_001030985.1;Parent=gene-CCO46_RS14775;Dbxref=GenBank:WP_001030985.1;Name=WP_001030985.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=CCO46_RS14775;product=diguanylate cyclase DgcN;protein_id=WP_001030985.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 13262 13609 . - . ID=gene-CCO46_RS14780;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CCO46_RS14780;old_locus_tag=CCO46_14780 NZ_NPOH01000012.1 Protein Homology CDS 13262 13609 . - 0 ID=cds-WP_000065257.1;Parent=gene-CCO46_RS14780;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=CCO46_RS14780;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 13650 14417 . - . ID=gene-CCO46_RS14785;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CCO46_RS14785;old_locus_tag=CCO46_14785 NZ_NPOH01000012.1 Protein Homology CDS 13650 14417 . - 0 ID=cds-WP_000469804.1;Parent=gene-CCO46_RS14785;Dbxref=GenBank:WP_000469804.1;Name=WP_000469804.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=CCO46_RS14785;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469804.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 14462 15010 . - . ID=gene-CCO46_RS14790;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CCO46_RS14790;old_locus_tag=CCO46_14790 NZ_NPOH01000012.1 Protein Homology CDS 14462 15010 . - 0 ID=cds-WP_000043266.1;Parent=gene-CCO46_RS14790;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=CCO46_RS14790;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 15029 15277 . - . ID=gene-CCO46_RS14795;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CCO46_RS14795;old_locus_tag=CCO46_14795 NZ_NPOH01000012.1 Protein Homology CDS 15029 15277 . - 0 ID=cds-WP_000256453.1;Parent=gene-CCO46_RS14795;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=CCO46_RS14795;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 15591 16952 . - . ID=gene-CCO46_RS14800;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CCO46_RS14800;old_locus_tag=CCO46_14800 NZ_NPOH01000012.1 Protein Homology CDS 15591 16952 . - 0 ID=cds-WP_000460052.1;Parent=gene-CCO46_RS14800;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=CCO46_RS14800;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 17118 17909 . + . ID=gene-CCO46_RS14805;Name=CCO46_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14805;old_locus_tag=CCO46_14805 NZ_NPOH01000012.1 Protein Homology CDS 17118 17909 . + 0 ID=cds-WP_001537507.1;Parent=gene-CCO46_RS14805;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=CCO46_RS14805;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 17929 19215 . + . ID=gene-CCO46_RS14810;Name=CCO46_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14810;old_locus_tag=CCO46_14810 NZ_NPOH01000012.1 Protein Homology CDS 17929 19215 . + 0 ID=cds-WP_127172650.1;Parent=gene-CCO46_RS14810;Dbxref=GenBank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=CCO46_RS14810;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 19336 19941 . + . ID=gene-CCO46_RS14815;Name=CCO46_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14815;old_locus_tag=CCO46_14815 NZ_NPOH01000012.1 Protein Homology CDS 19336 19941 . + 0 ID=cds-WP_023205540.1;Parent=gene-CCO46_RS14815;Dbxref=GenBank:WP_023205540.1;Name=WP_023205540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=CCO46_RS14815;product=DUF6630 family protein;protein_id=WP_023205540.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 19976 20566 . - . ID=gene-CCO46_RS14820;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CCO46_RS14820;old_locus_tag=CCO46_14820 NZ_NPOH01000012.1 Protein Homology CDS 19976 20566 . - 0 ID=cds-WP_001518875.1;Parent=gene-CCO46_RS14820;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=CCO46_RS14820;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 20690 21568 . + . ID=gene-CCO46_RS14830;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=CCO46_RS14830;old_locus_tag=CCO46_14830 NZ_NPOH01000012.1 Protein Homology CDS 20690 21568 . + 0 ID=cds-WP_001059155.1;Parent=gene-CCO46_RS14830;Dbxref=GenBank:WP_001059155.1;Name=WP_001059155.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=CCO46_RS14830;product=NAD(+) kinase;protein_id=WP_001059155.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 21654 23315 . + . ID=gene-CCO46_RS14835;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CCO46_RS14835;old_locus_tag=CCO46_14835 NZ_NPOH01000012.1 Protein Homology CDS 21654 23315 . + 0 ID=cds-WP_000880965.1;Parent=gene-CCO46_RS14835;Dbxref=GenBank:WP_000880965.1;Name=WP_000880965.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=CCO46_RS14835;product=DNA repair protein RecN;protein_id=WP_000880965.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 23464 23802 . + . ID=gene-CCO46_RS14840;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=CCO46_RS14840;old_locus_tag=CCO46_14840 NZ_NPOH01000012.1 Protein Homology CDS 23464 23802 . + 0 ID=cds-WP_001203445.1;Parent=gene-CCO46_RS14840;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=CCO46_RS14840;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 23968 24258 . - . ID=gene-CCO46_RS14845;Name=CCO46_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14845;old_locus_tag=CCO46_14845 NZ_NPOH01000012.1 Protein Homology CDS 23968 24258 . - 0 ID=cds-WP_001112990.1;Parent=gene-CCO46_RS14845;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=CCO46_RS14845;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 24248 24685 . - . ID=gene-CCO46_RS14850;Name=CCO46_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14850;old_locus_tag=CCO46_14850 NZ_NPOH01000012.1 Protein Homology CDS 24248 24685 . - 0 ID=cds-WP_001537508.1;Parent=gene-CCO46_RS14850;Dbxref=GenBank:WP_001537508.1;Name=WP_001537508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=CCO46_RS14850;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001537508.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 24874 25356 . + . ID=gene-CCO46_RS14855;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CCO46_RS14855;old_locus_tag=CCO46_14855 NZ_NPOH01000012.1 Protein Homology CDS 24874 25356 . + 0 ID=cds-WP_001518569.1;Parent=gene-CCO46_RS14855;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=CCO46_RS14855;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 25976 37450 . + . ID=gene-CCO46_RS14860;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=CCO46_RS14860;old_locus_tag=CCO46_14860 NZ_NPOH01000012.1 Protein Homology CDS 25976 37450 . + 0 ID=cds-WP_097363374.1;Parent=gene-CCO46_RS14860;Dbxref=GenBank:WP_097363374.1;Name=WP_097363374.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=CCO46_RS14860;product=biofilm-associated protein BapA;protein_id=WP_097363374.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 37515 38924 . + . ID=gene-CCO46_RS14865;Name=CCO46_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14865;old_locus_tag=CCO46_14865 NZ_NPOH01000012.1 Protein Homology CDS 37515 38924 . + 0 ID=cds-WP_058331161.1;Parent=gene-CCO46_RS14865;Dbxref=GenBank:WP_058331161.1;Name=WP_058331161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=CCO46_RS14865;product=TolC family outer membrane protein;protein_id=WP_058331161.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 38921 41101 . + . ID=gene-CCO46_RS14870;Name=CCO46_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14870;old_locus_tag=CCO46_14870 NZ_NPOH01000012.1 Protein Homology CDS 38921 41101 . + 0 ID=cds-WP_000196141.1;Parent=gene-CCO46_RS14870;Dbxref=GenBank:WP_000196141.1;Name=WP_000196141.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=CCO46_RS14870;product=type I secretion system permease/ATPase;protein_id=WP_000196141.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 41109 42272 . + . ID=gene-CCO46_RS14875;Name=CCO46_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14875;old_locus_tag=CCO46_14875 NZ_NPOH01000012.1 Protein Homology CDS 41109 42272 . + 0 ID=cds-WP_000342601.1;Parent=gene-CCO46_RS14875;Dbxref=GenBank:WP_000342601.1;Name=WP_000342601.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=CCO46_RS14875;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_000342601.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 42344 42706 . + . ID=gene-CCO46_RS14880;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CCO46_RS14880;old_locus_tag=CCO46_14880 NZ_NPOH01000012.1 cmsearch tmRNA 42344 42706 . + . ID=rna-CCO46_RS14880;Parent=gene-CCO46_RS14880;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS14880;product=transfer-messenger RNA NZ_NPOH01000012.1 cmsearch exon 42344 42706 . + . ID=exon-CCO46_RS14880-1;Parent=rna-CCO46_RS14880;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS14880;product=transfer-messenger RNA NZ_NPOH01000012.1 RefSeq gene 42824 43042 . - . ID=gene-CCO46_RS14885;Name=CCO46_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14885;old_locus_tag=CCO46_14885 NZ_NPOH01000012.1 Protein Homology CDS 42824 43042 . - 0 ID=cds-WP_000980498.1;Parent=gene-CCO46_RS14885;Dbxref=GenBank:WP_000980498.1;Name=WP_000980498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461622.1;locus_tag=CCO46_RS14885;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000980498.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 43111 44211 . - . ID=gene-CCO46_RS14890;Name=CCO46_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14890;old_locus_tag=CCO46_14890 NZ_NPOH01000012.1 Protein Homology CDS 43111 44211 . - 0 ID=cds-WP_080160399.1;Parent=gene-CCO46_RS14890;Dbxref=GenBank:WP_080160399.1;Name=WP_080160399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=CCO46_RS14890;product=phage late control D family protein;protein_id=WP_080160399.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 44208 44693 . - . ID=gene-CCO46_RS14895;Name=CCO46_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14895;old_locus_tag=CCO46_14895 NZ_NPOH01000012.1 Protein Homology CDS 44208 44693 . - 0 ID=cds-WP_000980409.1;Parent=gene-CCO46_RS14895;Dbxref=GenBank:WP_000980409.1;Name=WP_000980409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=CCO46_RS14895;product=phage tail protein;protein_id=WP_000980409.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 44690 47497 . - . ID=gene-CCO46_RS14900;Name=CCO46_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14900;old_locus_tag=CCO46_14900 NZ_NPOH01000012.1 Protein Homology CDS 44690 47497 . - 0 ID=cds-WP_080160398.1;Parent=gene-CCO46_RS14900;Dbxref=GenBank:WP_080160398.1;Name=WP_080160398.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461625.1;locus_tag=CCO46_RS14900;product=phage tail tape measure protein;protein_id=WP_080160398.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 47490 47609 . - . ID=gene-CCO46_RS14905;Name=CCO46_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14905;old_locus_tag=CCO46_14905 NZ_NPOH01000012.1 Protein Homology CDS 47490 47609 . - 0 ID=cds-WP_000763316.1;Parent=gene-CCO46_RS14905;Dbxref=GenBank:WP_000763316.1;Name=WP_000763316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=CCO46_RS14905;product=GpE family phage tail protein;protein_id=WP_000763316.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 47624 47926 . - . ID=gene-CCO46_RS14910;Name=CCO46_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14910;old_locus_tag=CCO46_14910 NZ_NPOH01000012.1 Protein Homology CDS 47624 47926 . - 0 ID=cds-WP_001280962.1;Parent=gene-CCO46_RS14910;Dbxref=GenBank:WP_001280962.1;Name=WP_001280962.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=CCO46_RS14910;product=phage tail assembly protein;protein_id=WP_001280962.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 47981 48496 . - . ID=gene-CCO46_RS14915;Name=CCO46_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14915;old_locus_tag=CCO46_14915 NZ_NPOH01000012.1 Protein Homology CDS 47981 48496 . - 0 ID=cds-WP_080160397.1;Parent=gene-CCO46_RS14915;Dbxref=GenBank:WP_080160397.1;Name=WP_080160397.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=CCO46_RS14915;product=phage major tail tube protein;protein_id=WP_080160397.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 48506 49678 . - . ID=gene-CCO46_RS14920;Name=CCO46_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14920;old_locus_tag=CCO46_14920 NZ_NPOH01000012.1 Protein Homology CDS 48506 49678 . - 0 ID=cds-WP_000046103.1;Parent=gene-CCO46_RS14920;Dbxref=GenBank:WP_000046103.1;Name=WP_000046103.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=CCO46_RS14920;product=phage tail sheath protein;protein_id=WP_000046103.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 49809 50336 . - . ID=gene-CCO46_RS14925;Name=CCO46_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14925;old_locus_tag=CCO46_14925 NZ_NPOH01000012.1 Protein Homology CDS 49809 50336 . - 0 ID=cds-WP_000680167.1;Parent=gene-CCO46_RS14925;Dbxref=GenBank:WP_000680167.1;Name=WP_000680167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461177.1;locus_tag=CCO46_RS14925;product=tail fiber assembly protein;protein_id=WP_000680167.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 50339 52105 . - . ID=gene-CCO46_RS14930;Name=CCO46_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14930;old_locus_tag=CCO46_14930 NZ_NPOH01000012.1 Protein Homology CDS 50339 52105 . - 0 ID=cds-WP_010835202.1;Parent=gene-CCO46_RS14930;Dbxref=GenBank:WP_010835202.1;Name=WP_010835202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835202.1;locus_tag=CCO46_RS14930;product=phage tail protein;protein_id=WP_010835202.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 52102 52707 . - . ID=gene-CCO46_RS14935;Name=CCO46_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14935;old_locus_tag=CCO46_14935 NZ_NPOH01000012.1 Protein Homology CDS 52102 52707 . - 0 ID=cds-WP_001086804.1;Parent=gene-CCO46_RS14935;Dbxref=GenBank:WP_001086804.1;Name=WP_001086804.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461635.1;locus_tag=CCO46_RS14935;product=phage tail protein I;protein_id=WP_001086804.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 52700 53608 . - . ID=gene-CCO46_RS14940;Name=CCO46_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14940;old_locus_tag=CCO46_14940 NZ_NPOH01000012.1 Protein Homology CDS 52700 53608 . - 0 ID=cds-WP_000268273.1;Parent=gene-CCO46_RS14940;Dbxref=GenBank:WP_000268273.1;Name=WP_000268273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461636.1;locus_tag=CCO46_RS14940;product=baseplate assembly protein;protein_id=WP_000268273.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 53595 53954 . - . ID=gene-CCO46_RS14945;Name=CCO46_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14945;old_locus_tag=CCO46_14945 NZ_NPOH01000012.1 Protein Homology CDS 53595 53954 . - 0 ID=cds-WP_000177484.1;Parent=gene-CCO46_RS14945;Dbxref=GenBank:WP_000177484.1;Name=WP_000177484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461637.1;locus_tag=CCO46_RS14945;product=GPW/gp25 family protein;protein_id=WP_000177484.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 53951 54529 . - . ID=gene-CCO46_RS14950;Name=CCO46_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14950;old_locus_tag=CCO46_14950 NZ_NPOH01000012.1 Protein Homology CDS 53951 54529 . - 0 ID=cds-WP_080160396.1;Parent=gene-CCO46_RS14950;Dbxref=GenBank:WP_080160396.1;Name=WP_080160396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461638.1;locus_tag=CCO46_RS14950;product=phage baseplate assembly protein V;protein_id=WP_080160396.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 54630 55325 . + . ID=gene-CCO46_RS14955;Name=CCO46_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14955;old_locus_tag=CCO46_14955 NZ_NPOH01000012.1 Protein Homology CDS 54630 55325 . + 0 ID=cds-WP_080160395.1;Parent=gene-CCO46_RS14955;Dbxref=GenBank:WP_080160395.1;Name=WP_080160395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235545.1;locus_tag=CCO46_RS14955;product=DUF6216 family protein;protein_id=WP_080160395.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 55327 55776 . - . ID=gene-CCO46_RS14960;Name=CCO46_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14960;old_locus_tag=CCO46_14960 NZ_NPOH01000012.1 Protein Homology CDS 55327 55776 . - 0 ID=cds-WP_080160394.1;Parent=gene-CCO46_RS14960;Dbxref=GenBank:WP_080160394.1;Name=WP_080160394.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554841.1;locus_tag=CCO46_RS14960;product=phage virion morphogenesis protein;protein_id=WP_080160394.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 55769 56200 . - . ID=gene-CCO46_RS14965;Name=CCO46_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14965;old_locus_tag=CCO46_14965 NZ_NPOH01000012.1 Protein Homology CDS 55769 56200 . - 0 ID=cds-WP_080160393.1;Parent=gene-CCO46_RS14965;Dbxref=GenBank:WP_080160393.1;Name=WP_080160393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461640.1;locus_tag=CCO46_RS14965;product=phage tail protein;protein_id=WP_080160393.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 56163 56411 . - . ID=gene-CCO46_RS25505;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO46_RS25505;old_locus_tag=CCO46_14970 NZ_NPOH01000012.1 Protein Homology CDS 56163 56411 . - 0 ID=cds-WP_237141205.1;Parent=gene-CCO46_RS25505;Dbxref=GenBank:WP_237141205.1;Name=WP_237141205.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461641.1;locus_tag=CCO46_RS25505;product=Rz1-like lysis system protein LysC;protein_id=WP_237141205.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 56296 56724 . - . ID=gene-CCO46_RS14975;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=CCO46_RS14975;old_locus_tag=CCO46_14975 NZ_NPOH01000012.1 Protein Homology CDS 56296 56724 . - 0 ID=cds-WP_167850420.1;Parent=gene-CCO46_RS14975;Dbxref=GenBank:WP_167850420.1;Name=WP_167850420.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461642.1;locus_tag=CCO46_RS14975;product=Rz-like lysis system protein LysB;protein_id=WP_167850420.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 56721 57098 . - . ID=gene-CCO46_RS14980;Name=CCO46_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14980;old_locus_tag=CCO46_14980 NZ_NPOH01000012.1 Protein Homology CDS 56721 57098 . - 0 ID=cds-WP_000731036.1;Parent=gene-CCO46_RS14980;Dbxref=GenBank:WP_000731036.1;Name=WP_000731036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_079800986.1;locus_tag=CCO46_RS14980;product=DNZ54_00345 family protein;protein_id=WP_000731036.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 57103 57612 . - . ID=gene-CCO46_RS14985;Name=CCO46_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14985;old_locus_tag=CCO46_14985 NZ_NPOH01000012.1 Protein Homology CDS 57103 57612 . - 0 ID=cds-WP_080160391.1;Parent=gene-CCO46_RS14985;Dbxref=GenBank:WP_080160391.1;Name=WP_080160391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077486.1;locus_tag=CCO46_RS14985;product=lysozyme;protein_id=WP_080160391.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 57593 57808 . - . ID=gene-CCO46_RS14990;Name=CCO46_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14990;old_locus_tag=CCO46_14990 NZ_NPOH01000012.1 Protein Homology CDS 57593 57808 . - 0 ID=cds-WP_000171565.1;Parent=gene-CCO46_RS14990;Dbxref=GenBank:WP_000171565.1;Name=WP_000171565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461644.1;locus_tag=CCO46_RS14990;product=HP1 family phage holin;protein_id=WP_000171565.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 57812 58015 . - . ID=gene-CCO46_RS14995;Name=CCO46_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS14995;old_locus_tag=CCO46_14995 NZ_NPOH01000012.1 Protein Homology CDS 57812 58015 . - 0 ID=cds-WP_032636632.1;Parent=gene-CCO46_RS14995;Dbxref=GenBank:WP_032636632.1;Name=WP_032636632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461645.1;locus_tag=CCO46_RS14995;product=tail protein X;protein_id=WP_032636632.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 58015 58479 . - . ID=gene-CCO46_RS15000;Name=CCO46_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15000;old_locus_tag=CCO46_15000 NZ_NPOH01000012.1 Protein Homology CDS 58015 58479 . - 0 ID=cds-WP_010835209.1;Parent=gene-CCO46_RS15000;Dbxref=GenBank:WP_010835209.1;Name=WP_010835209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461646.1;locus_tag=CCO46_RS15000;product=head completion/stabilization protein;protein_id=WP_010835209.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 58573 59223 . - . ID=gene-CCO46_RS15005;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=CCO46_RS15005;old_locus_tag=CCO46_15005 NZ_NPOH01000012.1 Protein Homology CDS 58573 59223 . - 0 ID=cds-WP_001397653.1;Parent=gene-CCO46_RS15005;Dbxref=GenBank:WP_001397653.1;Name=WP_001397653.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461647.1;locus_tag=CCO46_RS15005;product=phage terminase small subunit;protein_id=WP_001397653.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 59227 60291 . - . ID=gene-CCO46_RS15010;Name=CCO46_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15010;old_locus_tag=CCO46_15010 NZ_NPOH01000012.1 Protein Homology CDS 59227 60291 . - 0 ID=cds-WP_080160390.1;Parent=gene-CCO46_RS15010;Dbxref=GenBank:WP_080160390.1;Name=WP_080160390.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001714844.1;locus_tag=CCO46_RS15010;product=phage major capsid protein%2C P2 family;protein_id=WP_080160390.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 60308 61141 . - . ID=gene-CCO46_RS15015;Name=CCO46_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15015;old_locus_tag=CCO46_15015 NZ_NPOH01000012.1 Protein Homology CDS 60308 61141 . - 0 ID=cds-WP_080068599.1;Parent=gene-CCO46_RS15015;Dbxref=GenBank:WP_080068599.1;Name=WP_080068599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461649.1;locus_tag=CCO46_RS15015;product=GPO family capsid scaffolding protein;protein_id=WP_080068599.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 61284 63050 . + . ID=gene-CCO46_RS15020;Name=CCO46_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15020;old_locus_tag=CCO46_15020 NZ_NPOH01000012.1 Protein Homology CDS 61284 63050 . + 0 ID=cds-WP_080160389.1;Parent=gene-CCO46_RS15020;Dbxref=GenBank:WP_080160389.1;Name=WP_080160389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226020.1;locus_tag=CCO46_RS15020;product=terminase ATPase subunit family protein;protein_id=WP_080160389.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 63050 64081 . + . ID=gene-CCO46_RS15025;Name=CCO46_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15025;old_locus_tag=CCO46_15025 NZ_NPOH01000012.1 Protein Homology CDS 63050 64081 . + 0 ID=cds-WP_080160388.1;Parent=gene-CCO46_RS15025;Dbxref=GenBank:WP_080160388.1;Name=WP_080160388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001573372.1;locus_tag=CCO46_RS15025;product=phage portal protein;protein_id=WP_080160388.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 64103 64960 . - . ID=gene-CCO46_RS15030;Name=CCO46_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15030;old_locus_tag=CCO46_15030 NZ_NPOH01000012.1 Protein Homology CDS 64103 64960 . - 0 ID=cds-WP_080160387.1;Parent=gene-CCO46_RS15030;Dbxref=GenBank:WP_080160387.1;Name=WP_080160387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000490524.1;locus_tag=CCO46_RS15030;product=LPO_1073/Vpar_1526 family protein;protein_id=WP_080160387.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 64970 65215 . - . ID=gene-CCO46_RS15035;Name=CCO46_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15035;old_locus_tag=CCO46_15035 NZ_NPOH01000012.1 Protein Homology CDS 64970 65215 . - 0 ID=cds-WP_023260023.1;Parent=gene-CCO46_RS15035;Dbxref=GenBank:WP_023260023.1;Name=WP_023260023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687979.1;locus_tag=CCO46_RS15035;product=hypothetical protein;protein_id=WP_023260023.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 65574 66314 . + . ID=gene-CCO46_RS15040;Name=CCO46_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15040;old_locus_tag=CCO46_15040 NZ_NPOH01000012.1 Protein Homology CDS 65574 66314 . + 0 ID=cds-WP_023238320.1;Parent=gene-CCO46_RS15040;Dbxref=GenBank:WP_023238320.1;Name=WP_023238320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215882.1;locus_tag=CCO46_RS15040;product=DUF4145 domain-containing protein;protein_id=WP_023238320.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 66443 66676 . - . ID=gene-CCO46_RS15045;Name=CCO46_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15045;old_locus_tag=CCO46_15045 NZ_NPOH01000012.1 Protein Homology CDS 66443 66676 . - 0 ID=cds-WP_023225963.1;Parent=gene-CCO46_RS15045;Dbxref=GenBank:WP_023225963.1;Name=WP_023225963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226016.1;locus_tag=CCO46_RS15045;product=DinI-like family protein;protein_id=WP_023225963.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 66688 66876 . - . ID=gene-CCO46_RS15050;Name=CCO46_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15050;old_locus_tag=CCO46_15050 NZ_NPOH01000012.1 Protein Homology CDS 66688 66876 . - 0 ID=cds-WP_001154444.1;Parent=gene-CCO46_RS15050;Dbxref=GenBank:WP_001154444.1;Name=WP_001154444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406337.1;locus_tag=CCO46_RS15050;product=hypothetical protein;protein_id=WP_001154444.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 67031 69442 . - . ID=gene-CCO46_RS15055;Name=CCO46_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15055;old_locus_tag=CCO46_15055 NZ_NPOH01000012.1 Protein Homology CDS 67031 69442 . - 0 ID=cds-WP_080160386.1;Parent=gene-CCO46_RS15055;Dbxref=GenBank:WP_080160386.1;Name=WP_080160386.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406336.1;locus_tag=CCO46_RS15055;product=replication endonuclease;protein_id=WP_080160386.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 69433 70290 . - . ID=gene-CCO46_RS15060;Name=CCO46_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15060;old_locus_tag=CCO46_15060 NZ_NPOH01000012.1 Protein Homology CDS 69433 70290 . - 0 ID=cds-WP_000104122.1;Parent=gene-CCO46_RS15060;Dbxref=GenBank:WP_000104122.1;Name=WP_000104122.1;Ontology_term=GO:0032259,GO:0032775,GO:0008757,GO:0009007,GO:0043565,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,sequence-specific DNA binding|0043565||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA,obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461657.1;locus_tag=CCO46_RS15060;product=DNA adenine methylase;protein_id=WP_000104122.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 70287 70514 . - . ID=gene-CCO46_RS15065;Name=CCO46_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15065;old_locus_tag=CCO46_15065 NZ_NPOH01000012.1 Protein Homology CDS 70287 70514 . - 0 ID=cds-WP_000785509.1;Parent=gene-CCO46_RS15065;Dbxref=GenBank:WP_000785509.1;Name=WP_000785509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461658.1;locus_tag=CCO46_RS15065;product=TraR/DksA family transcriptional regulator;protein_id=WP_000785509.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 70514 70747 . - . ID=gene-CCO46_RS15070;Name=CCO46_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15070;old_locus_tag=CCO46_15070 NZ_NPOH01000012.1 Protein Homology CDS 70514 70747 . - 0 ID=cds-WP_001244234.1;Parent=gene-CCO46_RS15070;Dbxref=GenBank:WP_001244234.1;Name=WP_001244234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461659.1;locus_tag=CCO46_RS15070;product=DUF2732 domain-containing protein;protein_id=WP_001244234.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 70815 71156 . - . ID=gene-CCO46_RS15075;Name=CCO46_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15075;old_locus_tag=CCO46_15075 NZ_NPOH01000012.1 Protein Homology CDS 70815 71156 . - 0 ID=cds-WP_000963195.1;Parent=gene-CCO46_RS15075;Dbxref=GenBank:WP_000963195.1;Name=WP_000963195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461660.1;locus_tag=CCO46_RS15075;product=DUF5347 domain-containing protein;protein_id=WP_000963195.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 71376 71834 . + . ID=gene-CCO46_RS15080;Name=CCO46_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15080;old_locus_tag=CCO46_15080 NZ_NPOH01000012.1 Protein Homology CDS 71376 71834 . + 0 ID=cds-WP_000166366.1;Parent=gene-CCO46_RS15080;Dbxref=GenBank:WP_000166366.1;Name=WP_000166366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461661.1;locus_tag=CCO46_RS15080;product=hypothetical protein;protein_id=WP_000166366.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 71782 72015 . - . ID=gene-CCO46_RS15085;Name=CCO46_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15085;old_locus_tag=CCO46_15085 NZ_NPOH01000012.1 Protein Homology CDS 71782 72015 . - 0 ID=cds-WP_000957775.1;Parent=gene-CCO46_RS15085;Dbxref=GenBank:WP_000957775.1;Name=WP_000957775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461662.1;locus_tag=CCO46_RS15085;product=phage filamentation protein Fil family protein;protein_id=WP_000957775.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 72023 72532 . - . ID=gene-CCO46_RS15090;Name=CCO46_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15090;old_locus_tag=CCO46_15090 NZ_NPOH01000012.1 Protein Homology CDS 72023 72532 . - 0 ID=cds-WP_000460862.1;Parent=gene-CCO46_RS15090;Dbxref=GenBank:WP_000460862.1;Name=WP_000460862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461663.1;locus_tag=CCO46_RS15090;product=phage regulatory CII family protein;protein_id=WP_000460862.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 72568 72807 . - . ID=gene-CCO46_RS15095;Name=CCO46_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15095;old_locus_tag=CCO46_15095 NZ_NPOH01000012.1 Protein Homology CDS 72568 72807 . - 0 ID=cds-WP_000102104.1;Parent=gene-CCO46_RS15095;Dbxref=GenBank:WP_000102104.1;Name=WP_000102104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461664.1;locus_tag=CCO46_RS15095;product=hypothetical protein;protein_id=WP_000102104.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 72924 73556 . + . ID=gene-CCO46_RS15100;Name=CCO46_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15100;old_locus_tag=CCO46_15100 NZ_NPOH01000012.1 Protein Homology CDS 72924 73556 . + 0 ID=cds-WP_000052559.1;Parent=gene-CCO46_RS15100;Dbxref=GenBank:WP_000052559.1;Name=WP_000052559.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461665.1;locus_tag=CCO46_RS15100;product=helix-turn-helix domain-containing protein;protein_id=WP_000052559.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 73560 74585 . + . ID=gene-CCO46_RS15105;Name=CCO46_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15105;old_locus_tag=CCO46_15105 NZ_NPOH01000012.1 Protein Homology CDS 73560 74585 . + 0 ID=cds-WP_001536726.1;Parent=gene-CCO46_RS15105;Dbxref=GenBank:WP_001536726.1;Name=WP_001536726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461666.1;locus_tag=CCO46_RS15105;product=site-specific integrase;protein_id=WP_001536726.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 74930 75391 . + . ID=gene-CCO46_RS15110;Name=CCO46_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15110;old_locus_tag=CCO46_15110 NZ_NPOH01000012.1 GeneMarkS-2+ CDS 74930 75391 . + 0 ID=cds-WP_094882640.1;Parent=gene-CCO46_RS15110;Dbxref=GenBank:WP_094882640.1;Name=WP_094882640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS15110;product=hypothetical protein;protein_id=WP_094882640.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 75395 75763 . + . ID=gene-CCO46_RS15115;Name=CCO46_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15115;old_locus_tag=CCO46_15115 NZ_NPOH01000012.1 GeneMarkS-2+ CDS 75395 75763 . + 0 ID=cds-WP_094882641.1;Parent=gene-CCO46_RS15115;Dbxref=GenBank:WP_094882641.1;Name=WP_094882641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS15115;product=hypothetical protein;protein_id=WP_094882641.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 76104 76775 . + . ID=gene-CCO46_RS15120;Name=CCO46_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15120;old_locus_tag=CCO46_15120 NZ_NPOH01000012.1 Protein Homology CDS 76104 76775 . + 0 ID=cds-WP_097363375.1;Parent=gene-CCO46_RS15120;Dbxref=GenBank:WP_097363375.1;Name=WP_097363375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542028.1;locus_tag=CCO46_RS15120;product=SOS response-associated peptidase;protein_id=WP_097363375.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 76768 78036 . - . ID=gene-CCO46_RS15125;Name=CCO46_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15125;old_locus_tag=CCO46_15125 NZ_NPOH01000012.1 Protein Homology CDS 76768 78036 . - 0 ID=cds-WP_079970724.1;Parent=gene-CCO46_RS15125;Dbxref=GenBank:WP_079970724.1;Name=WP_079970724.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO46_RS15125;product=Y-family DNA polymerase;protein_id=WP_079970724.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 78039 78458 . - . ID=gene-CCO46_RS15130;Name=CCO46_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15130;old_locus_tag=CCO46_15130 NZ_NPOH01000012.1 Protein Homology CDS 78039 78458 . - 0 ID=cds-WP_000394200.1;Parent=gene-CCO46_RS15130;Dbxref=GenBank:WP_000394200.1;Name=WP_000394200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=CCO46_RS15130;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000394200.1;transl_table=11 NZ_NPOH01000012.1 RefSeq pseudogene 78630 78743 . - . ID=gene-CCO46_RS25730;Name=CCO46_RS25730;end_range=78743,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25730;partial=true;pseudo=true NZ_NPOH01000012.1 Protein Homology CDS 78630 78743 . - 0 ID=cds-CCO46_RS25730;Parent=gene-CCO46_RS25730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=78743,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006673699.1;locus_tag=CCO46_RS25730;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 78968 79093 . + . ID=gene-CCO46_RS25880;Name=CCO46_RS25880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25880 NZ_NPOH01000012.1 Protein Homology CDS 78968 79093 . + 0 ID=cds-WP_140439314.1;Parent=gene-CCO46_RS25880;Dbxref=GenBank:WP_140439314.1;Name=WP_140439314.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=CCO46_RS25880;product=PagK family vesicle-borne virulence factor;protein_id=WP_140439314.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 79146 80381 . - . ID=gene-CCO46_RS15140;Name=CCO46_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15140;old_locus_tag=CCO46_15135 NZ_NPOH01000012.1 Protein Homology CDS 79146 80381 . - 0 ID=cds-WP_076726705.1;Parent=gene-CCO46_RS15140;Dbxref=GenBank:WP_076726705.1;Name=WP_076726705.1;Ontology_term=GO:0019062,GO:0046718,GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015976803.1;locus_tag=CCO46_RS15140;product=tail fiber domain-containing protein;protein_id=WP_076726705.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 80391 81350 . - . ID=gene-CCO46_RS15145;Name=CCO46_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15145;old_locus_tag=CCO46_15140 NZ_NPOH01000012.1 Protein Homology CDS 80391 81350 . - 0 ID=cds-WP_097363376.1;Parent=gene-CCO46_RS15145;Dbxref=GenBank:WP_097363376.1;Name=WP_097363376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835813.1;locus_tag=CCO46_RS15145;product=DUF6453 family protein;protein_id=WP_097363376.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 81359 84571 . - . ID=gene-CCO46_RS15150;Name=CCO46_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15150;old_locus_tag=CCO46_15145 NZ_NPOH01000012.1 Protein Homology CDS 81359 84571 . - 0 ID=cds-WP_097363377.1;Parent=gene-CCO46_RS15150;Dbxref=GenBank:WP_097363377.1;Name=WP_097363377.1;Ontology_term=GO:0019062,GO:0046813,GO:0098003,GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;go_process=virion attachment to host cell|0019062||IEA,receptor-mediated virion attachment to host cell|0046813||IEA,viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001162257.1;locus_tag=CCO46_RS15150;product=host specificity protein J;protein_id=WP_097363377.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 84626 85231 . - . ID=gene-CCO46_RS15155;Name=CCO46_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15155;old_locus_tag=CCO46_15150 NZ_NPOH01000012.1 Protein Homology CDS 84626 85231 . - 0 ID=cds-WP_076726710.1;Parent=gene-CCO46_RS15155;Dbxref=GenBank:WP_076726710.1;Name=WP_076726710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063526.1;locus_tag=CCO46_RS15155;product=tail assembly protein;protein_id=WP_076726710.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 85275 85616 . - . ID=gene-CCO46_RS15160;Name=CCO46_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15160;old_locus_tag=CCO46_15155 NZ_NPOH01000012.1 Protein Homology CDS 85275 85616 . - 0 ID=cds-WP_076726712.1;Parent=gene-CCO46_RS15160;Dbxref=GenBank:WP_076726712.1;Name=WP_076726712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000709674.1;locus_tag=CCO46_RS15160;product=hypothetical protein;protein_id=WP_076726712.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 85646 86356 . - . ID=gene-CCO46_RS15165;Name=CCO46_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15165;old_locus_tag=CCO46_15160 NZ_NPOH01000012.1 Protein Homology CDS 85646 86356 . - 0 ID=cds-WP_076726714.1;Parent=gene-CCO46_RS15165;Dbxref=GenBank:WP_076726714.1;Name=WP_076726714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001249174.1;locus_tag=CCO46_RS15165;product=C40 family peptidase;protein_id=WP_076726714.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 86358 87113 . - . ID=gene-CCO46_RS15170;Name=CCO46_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15170;old_locus_tag=CCO46_15165 NZ_NPOH01000012.1 Protein Homology CDS 86358 87113 . - 0 ID=cds-WP_076726716.1;Parent=gene-CCO46_RS15170;Dbxref=GenBank:WP_076726716.1;Name=WP_076726716.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322438.1;locus_tag=CCO46_RS15170;product=phage minor tail protein L;protein_id=WP_076726716.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 87110 87457 . - . ID=gene-CCO46_RS15175;Name=CCO46_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15175;old_locus_tag=CCO46_15170 NZ_NPOH01000012.1 Protein Homology CDS 87110 87457 . - 0 ID=cds-WP_048216155.1;Parent=gene-CCO46_RS15175;Dbxref=GenBank:WP_048216155.1;Name=WP_048216155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322439.1;locus_tag=CCO46_RS15175;product=phage tail protein;protein_id=WP_048216155.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 87461 89977 . - . ID=gene-CCO46_RS15180;Name=CCO46_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15180;old_locus_tag=CCO46_15175 NZ_NPOH01000012.1 Protein Homology CDS 87461 89977 . - 0 ID=cds-WP_097363378.1;Parent=gene-CCO46_RS15180;Dbxref=GenBank:WP_097363378.1;Name=WP_097363378.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322440.1;locus_tag=CCO46_RS15180;product=phage tail tape measure protein;protein_id=WP_097363378.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 89955 90233 . - . ID=gene-CCO46_RS15185;Name=CCO46_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15185;old_locus_tag=CCO46_15180 NZ_NPOH01000012.1 Protein Homology CDS 89955 90233 . - 0 ID=cds-WP_232230658.1;Parent=gene-CCO46_RS15185;Dbxref=GenBank:WP_232230658.1;Name=WP_232230658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063412.1;locus_tag=CCO46_RS15185;product=phage tail assembly protein T;protein_id=WP_232230658.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 90284 90691 . - . ID=gene-CCO46_RS15190;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=CCO46_RS15190;old_locus_tag=CCO46_15185 NZ_NPOH01000012.1 Protein Homology CDS 90284 90691 . - 0 ID=cds-WP_076726722.1;Parent=gene-CCO46_RS15190;Dbxref=GenBank:WP_076726722.1;Name=WP_076726722.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784480.1;locus_tag=CCO46_RS15190;product=phage tail assembly chaperone G;protein_id=WP_076726722.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 90728 91465 . - . ID=gene-CCO46_RS15195;Name=CCO46_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15195;old_locus_tag=CCO46_15190 NZ_NPOH01000012.1 Protein Homology CDS 90728 91465 . - 0 ID=cds-WP_076726724.1;Parent=gene-CCO46_RS15195;Dbxref=GenBank:WP_076726724.1;Name=WP_076726724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211139.1;locus_tag=CCO46_RS15195;product=phage tail tube protein;protein_id=WP_076726724.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 91473 91871 . - . ID=gene-CCO46_RS15200;Name=gpU;gbkey=Gene;gene=gpU;gene_biotype=protein_coding;locus_tag=CCO46_RS15200;old_locus_tag=CCO46_15195 NZ_NPOH01000012.1 Protein Homology CDS 91473 91871 . - 0 ID=cds-WP_008784478.1;Parent=gene-CCO46_RS15200;Dbxref=GenBank:WP_008784478.1;Name=WP_008784478.1;gbkey=CDS;gene=gpU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797819.1;locus_tag=CCO46_RS15200;product=phage tail terminator protein;protein_id=WP_008784478.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 91868 92422 . - . ID=gene-CCO46_RS15205;Name=CCO46_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15205;old_locus_tag=CCO46_15200 NZ_NPOH01000012.1 Protein Homology CDS 91868 92422 . - 0 ID=cds-WP_097363379.1;Parent=gene-CCO46_RS15205;Dbxref=GenBank:WP_097363379.1;Name=WP_097363379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322445.1;locus_tag=CCO46_RS15205;product=phage tail protein;protein_id=WP_097363379.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 92435 92710 . - . ID=gene-CCO46_RS15210;Name=CCO46_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15210;old_locus_tag=CCO46_15205 NZ_NPOH01000012.1 Protein Homology CDS 92435 92710 . - 0 ID=cds-WP_076726727.1;Parent=gene-CCO46_RS15210;Dbxref=GenBank:WP_076726727.1;Name=WP_076726727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283149.1;locus_tag=CCO46_RS15210;product=ATP-binding protein;protein_id=WP_076726727.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 92703 93029 . - . ID=gene-CCO46_RS15215;Name=CCO46_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15215;old_locus_tag=CCO46_15210 NZ_NPOH01000012.1 Protein Homology CDS 92703 93029 . - 0 ID=cds-WP_008784475.1;Parent=gene-CCO46_RS15215;Dbxref=GenBank:WP_008784475.1;Name=WP_008784475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097009.1;locus_tag=CCO46_RS15215;product=DUF2190 family protein;protein_id=WP_008784475.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 93121 95163 . - . ID=gene-CCO46_RS15220;Name=CCO46_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15220;old_locus_tag=CCO46_15215 NZ_NPOH01000012.1 Protein Homology CDS 93121 95163 . - 0 ID=cds-WP_155553807.1;Parent=gene-CCO46_RS15220;Dbxref=GenBank:WP_155553807.1;Name=WP_155553807.1;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460008.1;locus_tag=CCO46_RS15220;product=ClpP-like prohead protease/major capsid protein fusion protein;protein_id=WP_155553807.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 95090 96598 . - . ID=gene-CCO46_RS15225;Name=CCO46_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15225;old_locus_tag=CCO46_15220 NZ_NPOH01000012.1 Protein Homology CDS 95090 96598 . - 0 ID=cds-WP_076726731.1;Parent=gene-CCO46_RS15225;Dbxref=GenBank:WP_076726731.1;Name=WP_076726731.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985944.1;locus_tag=CCO46_RS15225;product=phage portal protein;protein_id=WP_076726731.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 96595 96810 . - . ID=gene-CCO46_RS15230;Name=CCO46_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15230;old_locus_tag=CCO46_15225 NZ_NPOH01000012.1 Protein Homology CDS 96595 96810 . - 0 ID=cds-WP_001082414.1;Parent=gene-CCO46_RS15230;Dbxref=GenBank:WP_001082414.1;Name=WP_001082414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082414.1;locus_tag=CCO46_RS15230;product=hypothetical protein;protein_id=WP_001082414.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 96807 98909 . - . ID=gene-CCO46_RS15235;Name=CCO46_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15235;old_locus_tag=CCO46_15230 NZ_NPOH01000012.1 Protein Homology CDS 96807 98909 . - 0 ID=cds-WP_076726733.1;Parent=gene-CCO46_RS15235;Dbxref=GenBank:WP_076726733.1;Name=WP_076726733.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118990.1;locus_tag=CCO46_RS15235;product=phage terminase large subunit family protein;protein_id=WP_076726733.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 98909 99397 . - . ID=gene-CCO46_RS15240;Name=CCO46_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15240;old_locus_tag=CCO46_15235 NZ_NPOH01000012.1 Protein Homology CDS 98909 99397 . - 0 ID=cds-WP_044700360.1;Parent=gene-CCO46_RS15240;Dbxref=GenBank:WP_044700360.1;Name=WP_044700360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884621.1;locus_tag=CCO46_RS15240;product=DUF1441 family protein;protein_id=WP_044700360.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 99584 100084 . - . ID=gene-CCO46_RS25295;Name=CCO46_RS25295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25295 NZ_NPOH01000012.1 GeneMarkS-2+ CDS 99584 100084 . - 0 ID=cds-WP_188317865.1;Parent=gene-CCO46_RS25295;Dbxref=GenBank:WP_188317865.1;Name=WP_188317865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25295;product=hypothetical protein;protein_id=WP_188317865.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 100146 100337 . - . ID=gene-CCO46_RS15250;Name=CCO46_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15250;old_locus_tag=CCO46_15245 NZ_NPOH01000012.1 Protein Homology CDS 100146 100337 . - 0 ID=cds-WP_076726736.1;Parent=gene-CCO46_RS15250;Dbxref=GenBank:WP_076726736.1;Name=WP_076726736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013575843.1;locus_tag=CCO46_RS15250;product=hypothetical protein;protein_id=WP_076726736.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 100371 100910 . - . ID=gene-CCO46_RS15255;Name=CCO46_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15255;old_locus_tag=CCO46_15250 NZ_NPOH01000012.1 Protein Homology CDS 100371 100910 . - 0 ID=cds-WP_076726738.1;Parent=gene-CCO46_RS15255;Dbxref=GenBank:WP_076726738.1;Name=WP_076726738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784470.1;locus_tag=CCO46_RS15255;product=DUF2514 domain-containing protein;protein_id=WP_076726738.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 100907 101524 . - . ID=gene-CCO46_RS15260;Name=CCO46_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15260;old_locus_tag=CCO46_15255 NZ_NPOH01000012.1 Protein Homology CDS 100907 101524 . - 0 ID=cds-WP_076726739.1;Parent=gene-CCO46_RS15260;Dbxref=GenBank:WP_076726739.1;Name=WP_076726739.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075799.1;locus_tag=CCO46_RS15260;product=glycoside hydrolase family 19 protein;protein_id=WP_076726739.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 101524 101805 . - . ID=gene-CCO46_RS15265;Name=CCO46_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15265;old_locus_tag=CCO46_15260 NZ_NPOH01000012.1 Protein Homology CDS 101524 101805 . - 0 ID=cds-WP_000250465.1;Parent=gene-CCO46_RS15265;Dbxref=GenBank:WP_000250465.1;Name=WP_000250465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000422366.1;locus_tag=CCO46_RS15265;product=phage holin family protein;protein_id=WP_000250465.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 101792 102178 . - . ID=gene-CCO46_RS15270;Name=CCO46_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15270;old_locus_tag=CCO46_15265 NZ_NPOH01000012.1 Protein Homology CDS 101792 102178 . - 0 ID=cds-WP_023171055.1;Parent=gene-CCO46_RS15270;Dbxref=GenBank:WP_023171055.1;Name=WP_023171055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283171.1;locus_tag=CCO46_RS15270;product=phage holin family protein;protein_id=WP_023171055.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 102329 103252 . + . ID=gene-CCO46_RS15275;Name=CCO46_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15275;old_locus_tag=CCO46_15270 NZ_NPOH01000012.1 Protein Homology CDS 102329 103252 . + 0 ID=cds-WP_000578420.1;Parent=gene-CCO46_RS15275;Dbxref=GenBank:WP_000578420.1;Name=WP_000578420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000578420.1;locus_tag=CCO46_RS15275;product=hypothetical protein;protein_id=WP_000578420.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 103359 104189 . - . ID=gene-CCO46_RS15280;Name=CCO46_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15280;old_locus_tag=CCO46_15275 NZ_NPOH01000012.1 Protein Homology CDS 103359 104189 . - 0 ID=cds-WP_023171057.1;Parent=gene-CCO46_RS15280;Dbxref=GenBank:WP_023171057.1;Name=WP_023171057.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806052.1;locus_tag=CCO46_RS15280;product=antitermination protein;protein_id=WP_023171057.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 104220 105209 . - . ID=gene-CCO46_RS15285;Name=CCO46_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15285;old_locus_tag=CCO46_15280 NZ_NPOH01000012.1 Protein Homology CDS 104220 105209 . - 0 ID=cds-WP_097363389.1;Parent=gene-CCO46_RS15285;Dbxref=GenBank:WP_097363389.1;Name=WP_097363389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461183.1;locus_tag=CCO46_RS15285;product=DUF968 domain-containing protein;protein_id=WP_097363389.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 105217 106077 . - . ID=gene-CCO46_RS15290;Name=CCO46_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15290;old_locus_tag=CCO46_15285 NZ_NPOH01000012.1 Protein Homology CDS 105217 106077 . - 0 ID=cds-WP_097363380.1;Parent=gene-CCO46_RS15290;Dbxref=GenBank:WP_097363380.1;Name=WP_097363380.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001349551.1;locus_tag=CCO46_RS15290;product=KilA-N domain-containing protein;protein_id=WP_097363380.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 106094 106483 . - . ID=gene-CCO46_RS15295;Name=CCO46_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15295;old_locus_tag=CCO46_15290 NZ_NPOH01000012.1 Protein Homology CDS 106094 106483 . - 0 ID=cds-WP_000767086.1;Parent=gene-CCO46_RS15295;Dbxref=GenBank:WP_000767086.1;Name=WP_000767086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767134.1;locus_tag=CCO46_RS15295;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000767086.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 106480 107373 . - . ID=gene-CCO46_RS15300;Name=CCO46_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15300;old_locus_tag=CCO46_15295 NZ_NPOH01000012.1 Protein Homology CDS 106480 107373 . - 0 ID=cds-WP_097363381.1;Parent=gene-CCO46_RS15300;Dbxref=GenBank:WP_097363381.1;Name=WP_097363381.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066940.1;locus_tag=CCO46_RS15300;product=phage N-6-adenine-methyltransferase;protein_id=WP_097363381.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 107373 107855 . - . ID=gene-CCO46_RS15305;Name=CCO46_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15305;old_locus_tag=CCO46_15300 NZ_NPOH01000012.1 Protein Homology CDS 107373 107855 . - 0 ID=cds-WP_001669427.1;Parent=gene-CCO46_RS15305;Dbxref=GenBank:WP_001669427.1;Name=WP_001669427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531318.1;locus_tag=CCO46_RS15305;product=PerC family transcriptional regulator;protein_id=WP_001669427.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 107857 108816 . - . ID=gene-CCO46_RS15310;Name=CCO46_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15310;old_locus_tag=CCO46_15305 NZ_NPOH01000012.1 Protein Homology CDS 107857 108816 . - 0 ID=cds-WP_097363382.1;Parent=gene-CCO46_RS15310;Dbxref=GenBank:WP_097363382.1;Name=WP_097363382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104949.1;locus_tag=CCO46_RS15310;product=helix-turn-helix domain-containing protein;protein_id=WP_097363382.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 108806 108985 . - . ID=gene-CCO46_RS15315;Name=CCO46_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15315;old_locus_tag=CCO46_15310 NZ_NPOH01000012.1 Protein Homology CDS 108806 108985 . - 0 ID=cds-WP_024135702.1;Parent=gene-CCO46_RS15315;Dbxref=GenBank:WP_024135702.1;Name=WP_024135702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001761574.1;locus_tag=CCO46_RS15315;product=DUF4222 domain-containing protein;protein_id=WP_024135702.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 109158 109709 . - . ID=gene-CCO46_RS15320;Name=CCO46_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15320;old_locus_tag=CCO46_15315 NZ_NPOH01000012.1 Protein Homology CDS 109158 109709 . - 0 ID=cds-WP_079905865.1;Parent=gene-CCO46_RS15320;Dbxref=GenBank:WP_079905865.1;Name=WP_079905865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784458.1;locus_tag=CCO46_RS15320;product=YmfL family putative regulatory protein;protein_id=WP_079905865.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 109720 109965 . - . ID=gene-CCO46_RS15325;Name=CCO46_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15325;old_locus_tag=CCO46_15320 NZ_NPOH01000012.1 Protein Homology CDS 109720 109965 . - 0 ID=cds-WP_097363383.1;Parent=gene-CCO46_RS15325;Dbxref=GenBank:WP_097363383.1;Name=WP_097363383.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906796.1;locus_tag=CCO46_RS15325;product=helix-turn-helix domain-containing protein;protein_id=WP_097363383.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 110063 110755 . + . ID=gene-CCO46_RS15330;Name=CCO46_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15330;old_locus_tag=CCO46_15325 NZ_NPOH01000012.1 Protein Homology CDS 110063 110755 . + 0 ID=cds-WP_097363384.1;Parent=gene-CCO46_RS15330;Dbxref=GenBank:WP_097363384.1;Name=WP_097363384.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459874.1;locus_tag=CCO46_RS15330;product=XRE family transcriptional regulator;protein_id=WP_097363384.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 110957 111100 . + . ID=gene-CCO46_RS25195;Name=CCO46_RS25195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25195 NZ_NPOH01000012.1 GeneMarkS-2+ CDS 110957 111100 . + 0 ID=cds-WP_159137401.1;Parent=gene-CCO46_RS25195;Dbxref=GenBank:WP_159137401.1;Name=WP_159137401.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25195;product=hypothetical protein;protein_id=WP_159137401.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 111494 112360 . + . ID=gene-CCO46_RS15335;Name=CCO46_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15335;old_locus_tag=CCO46_15330 NZ_NPOH01000012.1 Protein Homology CDS 111494 112360 . + 0 ID=cds-WP_086801742.1;Parent=gene-CCO46_RS15335;Dbxref=GenBank:WP_086801742.1;Name=WP_086801742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075213.1;locus_tag=CCO46_RS15335;product=hypothetical protein;protein_id=WP_086801742.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 112401 112607 . + . ID=gene-CCO46_RS25520;Name=CCO46_RS25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25520;old_locus_tag=CCO46_15335 NZ_NPOH01000012.1 Protein Homology CDS 112401 112607 . + 0 ID=cds-WP_024135505.1;Parent=gene-CCO46_RS25520;Dbxref=GenBank:WP_024135505.1;Name=WP_024135505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906810.1;locus_tag=CCO46_RS25520;product=hypothetical protein;protein_id=WP_024135505.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 112568 113743 . + . ID=gene-CCO46_RS15345;Name=CCO46_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15345;old_locus_tag=CCO46_15340 NZ_NPOH01000012.1 Protein Homology CDS 112568 113743 . + 0 ID=cds-WP_052907292.1;Parent=gene-CCO46_RS15345;Dbxref=GenBank:WP_052907292.1;Name=WP_052907292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000531801.1;locus_tag=CCO46_RS15345;product=site-specific integrase;protein_id=WP_052907292.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 113782 114594 . + . ID=gene-CCO46_RS15350;Name=CCO46_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15350;old_locus_tag=CCO46_15345 NZ_NPOH01000012.1 GeneMarkS-2+ CDS 113782 114594 . + 0 ID=cds-WP_052895176.1;Parent=gene-CCO46_RS15350;Dbxref=GenBank:WP_052895176.1;Name=WP_052895176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS15350;product=hypothetical protein;protein_id=WP_052895176.1;transl_table=11 NZ_NPOH01000012.1 RefSeq pseudogene 114803 115387 . + . ID=gene-CCO46_RS25525;Name=CCO46_RS25525;end_range=115387,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25525;partial=true;pseudo=true NZ_NPOH01000012.1 Protein Homology CDS 114803 115387 . + 0 ID=cds-CCO46_RS25525;Parent=gene-CCO46_RS25525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=115387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449149.1;locus_tag=CCO46_RS25525;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 115595 116056 . + . ID=gene-CCO46_RS25530;Name=CCO46_RS25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25530 NZ_NPOH01000012.1 Protein Homology CDS 115595 116056 . + 0 ID=cds-WP_231131004.1;Parent=gene-CCO46_RS25530;Dbxref=GenBank:WP_231131004.1;Name=WP_231131004.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=CCO46_RS25530;product=tyrosine-type recombinase/integrase;protein_id=WP_231131004.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 116201 117307 . + . ID=gene-CCO46_RS15360;Name=CCO46_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15360;old_locus_tag=CCO46_15355 NZ_NPOH01000012.1 Protein Homology CDS 116201 117307 . + 0 ID=cds-WP_058331162.1;Parent=gene-CCO46_RS15360;Dbxref=GenBank:WP_058331162.1;Name=WP_058331162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024420.6;locus_tag=CCO46_RS15360;product=protein NO VEIN domain-containing protein;protein_id=WP_058331162.1;transl_table=11 NZ_NPOH01000012.1 RefSeq pseudogene 117574 117840 . - . ID=gene-CCO46_RS25735;Name=CCO46_RS25735;end_range=117840,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25735;old_locus_tag=CCO46_15360;partial=true;pseudo=true NZ_NPOH01000012.1 Protein Homology CDS 117574 117840 . - 0 ID=cds-CCO46_RS25735;Parent=gene-CCO46_RS25735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=117840,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592083.1;locus_tag=CCO46_RS25735;partial=true;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;pseudo=true;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 118414 119343 . + . ID=gene-CCO46_RS15375;Name=CCO46_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15375;old_locus_tag=CCO46_15370 NZ_NPOH01000012.1 Protein Homology CDS 118414 119343 . + 0 ID=cds-WP_023204262.1;Parent=gene-CCO46_RS15375;Dbxref=GenBank:WP_023204262.1;Name=WP_023204262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=CCO46_RS15375;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_023204262.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 119637 120533 . + . ID=gene-CCO46_RS15385;Name=CCO46_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15385;old_locus_tag=CCO46_15380 NZ_NPOH01000012.1 Protein Homology CDS 119637 120533 . + 0 ID=cds-WP_000701514.1;Parent=gene-CCO46_RS15385;Dbxref=GenBank:WP_000701514.1;Name=WP_000701514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=CCO46_RS15385;product=antimicrobial resistance protein Mig-14;protein_id=WP_000701514.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 121255 122268 . - . ID=gene-CCO46_RS15390;Name=CCO46_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15390;old_locus_tag=CCO46_15385 NZ_NPOH01000012.1 Protein Homology CDS 121255 122268 . - 0 ID=cds-WP_001059351.1;Parent=gene-CCO46_RS15390;Dbxref=GenBank:WP_001059351.1;Name=WP_001059351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=CCO46_RS15390;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_001059351.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 122401 123816 . - . ID=gene-CCO46_RS15395;Name=CCO46_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15395;old_locus_tag=CCO46_15390 NZ_NPOH01000012.1 Protein Homology CDS 122401 123816 . - 0 ID=cds-WP_000872338.1;Parent=gene-CCO46_RS15395;Dbxref=GenBank:WP_000872338.1;Name=WP_000872338.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=CCO46_RS15395;product=sensor histidine kinase;protein_id=WP_000872338.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 123803 124477 . - . ID=gene-CCO46_RS15400;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=CCO46_RS15400;old_locus_tag=CCO46_15395 NZ_NPOH01000012.1 Protein Homology CDS 123803 124477 . - 0 ID=cds-WP_001237934.1;Parent=gene-CCO46_RS15400;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=CCO46_RS15400;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 124632 125609 . + . ID=gene-CCO46_RS15405;Name=CCO46_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15405;old_locus_tag=CCO46_15400 NZ_NPOH01000012.1 Protein Homology CDS 124632 125609 . + 0 ID=cds-WP_000744413.1;Parent=gene-CCO46_RS15405;Dbxref=GenBank:WP_000744413.1;Name=WP_000744413.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=CCO46_RS15405;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744413.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 125621 126055 . + . ID=gene-CCO46_RS15410;Name=CCO46_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15410;old_locus_tag=CCO46_15405 NZ_NPOH01000012.1 Protein Homology CDS 125621 126055 . + 0 ID=cds-WP_080160384.1;Parent=gene-CCO46_RS15410;Dbxref=GenBank:WP_080160384.1;Name=WP_080160384.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=CCO46_RS15410;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_080160384.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 126066 127580 . + . ID=gene-CCO46_RS15415;Name=CCO46_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15415;old_locus_tag=CCO46_15410 NZ_NPOH01000012.1 Protein Homology CDS 126066 127580 . + 0 ID=cds-WP_000382034.1;Parent=gene-CCO46_RS15415;Dbxref=GenBank:WP_000382034.1;Name=WP_000382034.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=CCO46_RS15415;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382034.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 127883 128860 . + . ID=gene-CCO46_RS15420;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=CCO46_RS15420;old_locus_tag=CCO46_15415 NZ_NPOH01000012.1 Protein Homology CDS 127883 128860 . + 0 ID=cds-WP_000993092.1;Parent=gene-CCO46_RS15420;Dbxref=GenBank:WP_000993092.1;Name=WP_000993092.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=CCO46_RS15420;product=glutarate dioxygenase GlaH;protein_id=WP_000993092.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 128886 130154 . + . ID=gene-CCO46_RS15425;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=CCO46_RS15425;old_locus_tag=CCO46_15420 NZ_NPOH01000012.1 Protein Homology CDS 128886 130154 . + 0 ID=cds-WP_097363385.1;Parent=gene-CCO46_RS15425;Dbxref=GenBank:WP_097363385.1;Name=WP_097363385.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=CCO46_RS15425;product=L-2-hydroxyglutarate oxidase;protein_id=WP_097363385.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 130176 131624 . + . ID=gene-CCO46_RS15430;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=CCO46_RS15430;old_locus_tag=CCO46_15425 NZ_NPOH01000012.1 Protein Homology CDS 130176 131624 . + 0 ID=cds-WP_097363386.1;Parent=gene-CCO46_RS15430;Dbxref=GenBank:WP_097363386.1;Name=WP_097363386.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=CCO46_RS15430;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_097363386.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 131639 132922 . + . ID=gene-CCO46_RS15435;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=CCO46_RS15435;old_locus_tag=CCO46_15430 NZ_NPOH01000012.1 Protein Homology CDS 131639 132922 . + 0 ID=cds-WP_001095556.1;Parent=gene-CCO46_RS15435;Dbxref=GenBank:WP_001095556.1;Name=WP_001095556.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=CCO46_RS15435;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_001095556.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 133052 134452 . + . ID=gene-CCO46_RS15440;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=CCO46_RS15440;old_locus_tag=CCO46_15435 NZ_NPOH01000012.1 Protein Homology CDS 133052 134452 . + 0 ID=cds-WP_000531282.1;Parent=gene-CCO46_RS15440;Dbxref=GenBank:WP_000531282.1;Name=WP_000531282.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=CCO46_RS15440;product=GABA permease;protein_id=WP_000531282.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 134494 135171 . + . ID=gene-CCO46_RS15445;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=CCO46_RS15445;old_locus_tag=CCO46_15440 NZ_NPOH01000012.1 Protein Homology CDS 134494 135171 . + 0 ID=cds-WP_000126152.1;Parent=gene-CCO46_RS15445;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=CCO46_RS15445;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 135193 135642 . - . ID=gene-CCO46_RS15450;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=CCO46_RS15450;old_locus_tag=CCO46_15445 NZ_NPOH01000012.1 Protein Homology CDS 135193 135642 . - 0 ID=cds-WP_000522406.1;Parent=gene-CCO46_RS15450;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=CCO46_RS15450;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 135742 135900 . - . ID=gene-CCO46_RS15460;Name=CCO46_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15460;old_locus_tag=CCO46_15450 NZ_NPOH01000012.1 Protein Homology CDS 135742 135900 . - 0 ID=cds-WP_000508175.1;Parent=gene-CCO46_RS15460;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=CCO46_RS15460;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 136083 136382 . + . ID=gene-CCO46_RS15465;Name=CCO46_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15465;old_locus_tag=CCO46_15455 NZ_NPOH01000012.1 Protein Homology CDS 136083 136382 . + 0 ID=cds-WP_000137432.1;Parent=gene-CCO46_RS15465;Dbxref=GenBank:WP_000137432.1;Name=WP_000137432.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=CCO46_RS15465;product=ArsR/SmtB family transcription factor;protein_id=WP_000137432.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 136392 136919 . + . ID=gene-CCO46_RS15470;Name=CCO46_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15470;old_locus_tag=CCO46_15460 NZ_NPOH01000012.1 Protein Homology CDS 136392 136919 . + 0 ID=cds-WP_000022011.1;Parent=gene-CCO46_RS15470;Dbxref=GenBank:WP_000022011.1;Name=WP_000022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=CCO46_RS15470;product=rhodanese family protein;protein_id=WP_000022011.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 136998 137177 . + . ID=gene-CCO46_RS15475;Name=CCO46_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15475;old_locus_tag=CCO46_15465 NZ_NPOH01000012.1 Protein Homology CDS 136998 137177 . + 0 ID=cds-WP_000494936.1;Parent=gene-CCO46_RS15475;Dbxref=GenBank:WP_000494936.1;Name=WP_000494936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=CCO46_RS15475;product=hypothetical protein;protein_id=WP_000494936.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 137267 137668 . - . ID=gene-CCO46_RS15480;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=CCO46_RS15480;old_locus_tag=CCO46_15470 NZ_NPOH01000012.1 Protein Homology CDS 137267 137668 . - 0 ID=cds-WP_097363387.1;Parent=gene-CCO46_RS15480;Dbxref=GenBank:WP_097363387.1;Name=WP_097363387.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=CCO46_RS15480;product=DNA-binding protein StpA;protein_id=WP_097363387.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 138567 139016 . + . ID=gene-CCO46_RS15495;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=CCO46_RS15495;old_locus_tag=CCO46_15485 NZ_NPOH01000012.1 Protein Homology CDS 138567 139016 . + 0 ID=cds-WP_000492669.1;Parent=gene-CCO46_RS15495;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=CCO46_RS15495;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 139051 139401 . - . ID=gene-CCO46_RS15500;Name=CCO46_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15500;old_locus_tag=CCO46_15490 NZ_NPOH01000012.1 Protein Homology CDS 139051 139401 . - 0 ID=cds-WP_000281305.1;Parent=gene-CCO46_RS15500;Dbxref=GenBank:WP_000281305.1;Name=WP_000281305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=CCO46_RS15500;product=DUF2002 family protein;protein_id=WP_000281305.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 139563 139889 . + . ID=gene-CCO46_RS15505;Name=CCO46_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15505;old_locus_tag=CCO46_15495 NZ_NPOH01000012.1 Protein Homology CDS 139563 139889 . + 0 ID=cds-WP_001519557.1;Parent=gene-CCO46_RS15505;Dbxref=GenBank:WP_001519557.1;Name=WP_001519557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=CCO46_RS15505;product=DUF883 domain-containing protein;protein_id=WP_001519557.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 139973 141307 . - . ID=gene-CCO46_RS15510;Name=CCO46_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15510;old_locus_tag=CCO46_15500 NZ_NPOH01000012.1 Protein Homology CDS 139973 141307 . - 0 ID=cds-WP_094887552.1;Parent=gene-CCO46_RS15510;Dbxref=GenBank:WP_094887552.1;Name=WP_094887552.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=CCO46_RS15510;product=PLP-dependent aminotransferase family protein;protein_id=WP_094887552.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 141396 141827 . + . ID=gene-CCO46_RS15515;Name=CCO46_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15515;old_locus_tag=CCO46_15505 NZ_NPOH01000012.1 Protein Homology CDS 141396 141827 . + 0 ID=cds-WP_000209809.1;Parent=gene-CCO46_RS15515;Dbxref=GenBank:WP_000209809.1;Name=WP_000209809.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=CCO46_RS15515;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209809.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 142099 142344 . + . ID=gene-CCO46_RS15525;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=CCO46_RS15525;old_locus_tag=CCO46_15515 NZ_NPOH01000012.1 Protein Homology CDS 142099 142344 . + 0 ID=cds-WP_000028870.1;Parent=gene-CCO46_RS15525;Dbxref=GenBank:WP_000028870.1;Name=WP_000028870.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=CCO46_RS15525;product=glutaredoxin-like protein NrdH;protein_id=WP_000028870.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 142341 142751 . + . ID=gene-CCO46_RS15530;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CCO46_RS15530;old_locus_tag=CCO46_15520 NZ_NPOH01000012.1 Protein Homology CDS 142341 142751 . + 0 ID=cds-WP_001275401.1;Parent=gene-CCO46_RS15530;Dbxref=GenBank:WP_001275401.1;Name=WP_001275401.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=CCO46_RS15530;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275401.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 142724 144868 . + . ID=gene-CCO46_RS15535;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CCO46_RS15535;old_locus_tag=CCO46_15525 NZ_NPOH01000012.1 Protein Homology CDS 142724 144868 . + 0 ID=cds-WP_080160379.1;Parent=gene-CCO46_RS15535;Dbxref=GenBank:WP_080160379.1;Name=WP_080160379.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=CCO46_RS15535;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_080160379.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 144879 145838 . + . ID=gene-CCO46_RS15540;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CCO46_RS15540;old_locus_tag=CCO46_15530 NZ_NPOH01000012.1 Protein Homology CDS 144879 145838 . + 0 ID=cds-WP_000777901.1;Parent=gene-CCO46_RS15540;Dbxref=GenBank:WP_000777901.1;Name=WP_000777901.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=CCO46_RS15540;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777901.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 146192 147394 . + . ID=gene-CCO46_RS15545;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=CCO46_RS15545;old_locus_tag=CCO46_15535 NZ_NPOH01000012.1 Protein Homology CDS 146192 147394 . + 0 ID=cds-WP_000985529.1;Parent=gene-CCO46_RS15545;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=CCO46_RS15545;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 147387 148451 . + . ID=gene-CCO46_RS15550;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=CCO46_RS15550;old_locus_tag=CCO46_15540 NZ_NPOH01000012.1 Protein Homology CDS 147387 148451 . + 0 ID=cds-WP_000775021.1;Parent=gene-CCO46_RS15550;Dbxref=GenBank:WP_000775021.1;Name=WP_000775021.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=CCO46_RS15550;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775021.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 148521 149516 . + . ID=gene-CCO46_RS15555;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=CCO46_RS15555;old_locus_tag=CCO46_15545 NZ_NPOH01000012.1 Protein Homology CDS 148521 149516 . + 0 ID=cds-WP_001216618.1;Parent=gene-CCO46_RS15555;Dbxref=GenBank:WP_001216618.1;Name=WP_001216618.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=CCO46_RS15555;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216618.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 149681 150865 . + . ID=gene-CCO46_RS15560;Name=CCO46_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15560;old_locus_tag=CCO46_15550 NZ_NPOH01000012.1 Protein Homology CDS 149681 150865 . + 0 ID=cds-WP_000165758.1;Parent=gene-CCO46_RS15560;Dbxref=GenBank:WP_000165758.1;Name=WP_000165758.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=CCO46_RS15560;product=MFS transporter;protein_id=WP_000165758.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 151362 151892 . + . ID=gene-CCO46_RS15565;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=CCO46_RS15565;old_locus_tag=CCO46_15555 NZ_NPOH01000012.1 Protein Homology CDS 151362 151892 . + 0 ID=cds-WP_000378431.1;Parent=gene-CCO46_RS15565;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=CCO46_RS15565;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 152019 153191 . + . ID=gene-CCO46_RS15570;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=CCO46_RS15570;old_locus_tag=CCO46_15560 NZ_NPOH01000012.1 Protein Homology CDS 152019 153191 . + 0 ID=cds-WP_001275605.1;Parent=gene-CCO46_RS15570;Dbxref=GenBank:WP_001275605.1;Name=WP_001275605.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=CCO46_RS15570;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275605.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 153208 154746 . + . ID=gene-CCO46_RS15575;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=CCO46_RS15575;old_locus_tag=CCO46_15565 NZ_NPOH01000012.1 Protein Homology CDS 153208 154746 . + 0 ID=cds-WP_001187297.1;Parent=gene-CCO46_RS15575;Dbxref=GenBank:WP_001187297.1;Name=WP_001187297.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=CCO46_RS15575;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187297.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 154795 156165 . - . ID=gene-CCO46_RS15580;Name=CCO46_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15580;old_locus_tag=CCO46_15570 NZ_NPOH01000012.1 Protein Homology CDS 154795 156165 . - 0 ID=cds-WP_097363388.1;Parent=gene-CCO46_RS15580;Dbxref=GenBank:WP_097363388.1;Name=WP_097363388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=CCO46_RS15580;product=carbohydrate porin;protein_id=WP_097363388.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 156511 157026 . - . ID=gene-CCO46_RS15585;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=CCO46_RS15585;old_locus_tag=CCO46_15575 NZ_NPOH01000012.1 Protein Homology CDS 156511 157026 . - 0 ID=cds-WP_001130194.1;Parent=gene-CCO46_RS15585;Dbxref=GenBank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=CCO46_RS15585;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 157176 158732 . - . ID=gene-CCO46_RS15590;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=CCO46_RS15590;old_locus_tag=CCO46_15580 NZ_NPOH01000012.1 Protein Homology CDS 157176 158732 . - 0 ID=cds-WP_000611821.1;Parent=gene-CCO46_RS15590;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=CCO46_RS15590;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 158809 159234 . - . ID=gene-CCO46_RS15595;Name=CCO46_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15595;old_locus_tag=CCO46_15585 NZ_NPOH01000012.1 Protein Homology CDS 158809 159234 . - 0 ID=cds-WP_058331164.1;Parent=gene-CCO46_RS15595;Dbxref=GenBank:WP_058331164.1;Name=WP_058331164.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=CCO46_RS15595;product=YqaA family protein;protein_id=WP_058331164.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 159231 159797 . - . ID=gene-CCO46_RS15600;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=CCO46_RS15600;old_locus_tag=CCO46_15590 NZ_NPOH01000012.1 Protein Homology CDS 159231 159797 . - 0 ID=cds-WP_058331165.1;Parent=gene-CCO46_RS15600;Dbxref=GenBank:WP_058331165.1;Name=WP_058331165.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=CCO46_RS15600;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_058331165.1;transl_table=11 NZ_NPOH01000012.1 RefSeq gene 160028 160104 . - . ID=gene-CCO46_RS15605;Name=CCO46_RS15605;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS15605;old_locus_tag=CCO46_15595 NZ_NPOH01000012.1 tRNAscan-SE tRNA 160028 160104 . - . ID=rna-CCO46_RS15605;Parent=gene-CCO46_RS15605;anticodon=(pos:complement(160068..160070));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS15605;product=tRNA-Arg NZ_NPOH01000012.1 tRNAscan-SE exon 160028 160104 . - . ID=exon-CCO46_RS15605-1;Parent=rna-CCO46_RS15605;anticodon=(pos:complement(160068..160070));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS15605;product=tRNA-Arg NZ_NPOH01000012.1 RefSeq gene 160167 160243 . - . ID=gene-CCO46_RS15610;Name=CCO46_RS15610;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS15610;old_locus_tag=CCO46_15600 NZ_NPOH01000012.1 tRNAscan-SE tRNA 160167 160243 . - . ID=rna-CCO46_RS15610;Parent=gene-CCO46_RS15610;anticodon=(pos:complement(160207..160209));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS15610;product=tRNA-Arg NZ_NPOH01000012.1 tRNAscan-SE exon 160167 160243 . - . ID=exon-CCO46_RS15610-1;Parent=rna-CCO46_RS15610;anticodon=(pos:complement(160207..160209));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS15610;product=tRNA-Arg NZ_NPOH01000012.1 RefSeq gene 160306 160382 . - . ID=gene-CCO46_RS15615;Name=CCO46_RS15615;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS15615;old_locus_tag=CCO46_15605 NZ_NPOH01000012.1 tRNAscan-SE tRNA 160306 160382 . - . ID=rna-CCO46_RS15615;Parent=gene-CCO46_RS15615;anticodon=(pos:complement(160346..160348));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS15615;product=tRNA-Arg NZ_NPOH01000012.1 tRNAscan-SE exon 160306 160382 . - . ID=exon-CCO46_RS15615-1;Parent=rna-CCO46_RS15615;anticodon=(pos:complement(160346..160348));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS15615;product=tRNA-Arg ##sequence-region NZ_NPOH01000013.1 1 146658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000013.1 RefSeq region 1 146658 . + . ID=NZ_NPOH01000013.1:1..146658;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000013.1 RefSeq gene 1 727 . + . ID=gene-CCO46_RS15620;Name=CCO46_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15620;old_locus_tag=CCO46_15610;partial=true;start_range=.,1 NZ_NPOH01000013.1 Protein Homology CDS 1 727 . + 1 ID=cds-WP_140439315.1;Parent=gene-CCO46_RS15620;Dbxref=GenBank:WP_140439315.1;Name=WP_140439315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459747.1;locus_tag=CCO46_RS15620;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_140439315.1;start_range=.,1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 846 1544 . + . ID=gene-CCO46_RS15625;Name=CCO46_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15625;old_locus_tag=CCO46_15615 NZ_NPOH01000013.1 Protein Homology CDS 846 1544 . + 0 ID=cds-WP_058332020.1;Parent=gene-CCO46_RS15625;Dbxref=GenBank:WP_058332020.1;Name=WP_058332020.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=CCO46_RS15625;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_058332020.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 1924 3003 . + . ID=gene-CCO46_RS15630;Name=CCO46_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15630;old_locus_tag=CCO46_15620 NZ_NPOH01000013.1 Protein Homology CDS 1924 3003 . + 0 ID=cds-WP_080160246.1;Parent=gene-CCO46_RS15630;Dbxref=GenBank:WP_080160246.1;Name=WP_080160246.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=CCO46_RS15630;product=FecCD family ABC transporter permease;protein_id=WP_080160246.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 3003 3779 . + . ID=gene-CCO46_RS15635;Name=CCO46_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15635;old_locus_tag=CCO46_15625 NZ_NPOH01000013.1 Protein Homology CDS 3003 3779 . + 0 ID=cds-WP_001214710.1;Parent=gene-CCO46_RS15635;Dbxref=GenBank:WP_001214710.1;Name=WP_001214710.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=CCO46_RS15635;product=ABC transporter ATP-binding protein;protein_id=WP_001214710.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 3870 4622 . - . ID=gene-CCO46_RS15640;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=CCO46_RS15640;old_locus_tag=CCO46_15630 NZ_NPOH01000013.1 Protein Homology CDS 3870 4622 . - 0 ID=cds-WP_000301556.1;Parent=gene-CCO46_RS15640;Dbxref=GenBank:WP_000301556.1;Name=WP_000301556.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=CCO46_RS15640;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301556.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 4846 5886 . - . ID=gene-CCO46_RS15650;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=CCO46_RS15650;old_locus_tag=CCO46_15640 NZ_NPOH01000013.1 Protein Homology CDS 4846 5886 . - 0 ID=cds-WP_000931428.1;Parent=gene-CCO46_RS15650;Dbxref=GenBank:WP_000931428.1;Name=WP_000931428.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=CCO46_RS15650;product=galactose-1-epimerase;protein_id=WP_000931428.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 5880 7028 . - . ID=gene-CCO46_RS15655;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=CCO46_RS15655;old_locus_tag=CCO46_15645 NZ_NPOH01000013.1 Protein Homology CDS 5880 7028 . - 0 ID=cds-WP_061372153.1;Parent=gene-CCO46_RS15655;Dbxref=GenBank:WP_061372153.1;Name=WP_061372153.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=CCO46_RS15655;product=galactokinase;protein_id=WP_061372153.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 7031 8077 . - . ID=gene-CCO46_RS15660;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CCO46_RS15660;old_locus_tag=CCO46_15650 NZ_NPOH01000013.1 Protein Homology CDS 7031 8077 . - 0 ID=cds-WP_000187473.1;Parent=gene-CCO46_RS15660;Dbxref=GenBank:WP_000187473.1;Name=WP_000187473.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=CCO46_RS15660;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187473.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 8088 9104 . - . ID=gene-CCO46_RS15665;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CCO46_RS15665;old_locus_tag=CCO46_15655 NZ_NPOH01000013.1 Protein Homology CDS 8088 9104 . - 0 ID=cds-WP_001265463.1;Parent=gene-CCO46_RS15665;Dbxref=GenBank:WP_001265463.1;Name=WP_001265463.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=CCO46_RS15665;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265463.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 9326 10234 . - . ID=gene-CCO46_RS15670;Name=CCO46_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15670;old_locus_tag=CCO46_15660 NZ_NPOH01000013.1 Protein Homology CDS 9326 10234 . - 0 ID=cds-WP_000885515.1;Parent=gene-CCO46_RS15670;Dbxref=GenBank:WP_000885515.1;Name=WP_000885515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=CCO46_RS15670;product=DUF2167 domain-containing protein;protein_id=WP_000885515.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 10405 11880 . - . ID=gene-CCO46_RS15675;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=CCO46_RS15675;old_locus_tag=CCO46_15665 NZ_NPOH01000013.1 Protein Homology CDS 10405 11880 . - 0 ID=cds-WP_000096942.1;Parent=gene-CCO46_RS15675;Dbxref=GenBank:WP_000096942.1;Name=WP_000096942.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=CCO46_RS15675;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096942.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 11948 12736 . - . ID=gene-CCO46_RS15685;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=CCO46_RS15685;old_locus_tag=CCO46_15675 NZ_NPOH01000013.1 Protein Homology CDS 11948 12736 . - 0 ID=cds-WP_001147416.1;Parent=gene-CCO46_RS15685;Dbxref=GenBank:WP_001147416.1;Name=WP_001147416.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=CCO46_RS15685;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147416.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 12865 13014 . + . ID=gene-CCO46_RS15690;Name=CCO46_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15690;old_locus_tag=CCO46_15680 NZ_NPOH01000013.1 Protein Homology CDS 12865 13014 . + 0 ID=cds-WP_000891513.1;Parent=gene-CCO46_RS15690;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=CCO46_RS15690;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 13181 13954 . + . ID=gene-CCO46_RS15695;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CCO46_RS15695;old_locus_tag=CCO46_15685 NZ_NPOH01000013.1 Protein Homology CDS 13181 13954 . + 0 ID=cds-WP_097363390.1;Parent=gene-CCO46_RS15695;Dbxref=GenBank:WP_097363390.1;Name=WP_097363390.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=CCO46_RS15695;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_097363390.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 13954 14643 . + . ID=gene-CCO46_RS15700;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CCO46_RS15700;old_locus_tag=CCO46_15690 NZ_NPOH01000013.1 Protein Homology CDS 13954 14643 . + 0 ID=cds-WP_000604026.1;Parent=gene-CCO46_RS15700;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=CCO46_RS15700;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 14646 15704 . + . ID=gene-CCO46_RS15705;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=CCO46_RS15705;old_locus_tag=CCO46_15695 NZ_NPOH01000013.1 Protein Homology CDS 14646 15704 . + 0 ID=cds-WP_000891710.1;Parent=gene-CCO46_RS15705;Dbxref=GenBank:WP_000891710.1;Name=WP_000891710.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=CCO46_RS15705;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891710.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 15705 16523 . - . ID=gene-CCO46_RS15710;Name=CCO46_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15710;old_locus_tag=CCO46_15700 NZ_NPOH01000013.1 Protein Homology CDS 15705 16523 . - 0 ID=cds-WP_001748281.1;Parent=gene-CCO46_RS15710;Dbxref=GenBank:WP_001748281.1;Name=WP_001748281.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=CCO46_RS15710;product=pyridoxal phosphatase;protein_id=WP_001748281.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 16687 17682 . + . ID=gene-CCO46_RS15715;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=CCO46_RS15715;old_locus_tag=CCO46_15705 NZ_NPOH01000013.1 Protein Homology CDS 16687 17682 . + 0 ID=cds-WP_000815468.1;Parent=gene-CCO46_RS15715;Dbxref=GenBank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=CCO46_RS15715;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 17795 18727 . - . ID=gene-CCO46_RS15720;Name=CCO46_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15720;old_locus_tag=CCO46_15710 NZ_NPOH01000013.1 Protein Homology CDS 17795 18727 . - 0 ID=cds-WP_015632852.1;Parent=gene-CCO46_RS15720;Dbxref=GenBank:WP_015632852.1;Name=WP_015632852.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632852.1;locus_tag=CCO46_RS15720;product=LysR family transcriptional regulator;protein_id=WP_015632852.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 18926 19981 . + . ID=gene-CCO46_RS15725;Name=CCO46_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15725;old_locus_tag=CCO46_15715 NZ_NPOH01000013.1 Protein Homology CDS 18926 19981 . + 0 ID=cds-WP_000723617.1;Parent=gene-CCO46_RS15725;Dbxref=GenBank:WP_000723617.1;Name=WP_000723617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723616.1;locus_tag=CCO46_RS15725;product=4-oxalomesaconate tautomerase;protein_id=WP_000723617.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 20064 21497 . + . ID=gene-CCO46_RS15730;Name=CCO46_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15730;old_locus_tag=CCO46_15720 NZ_NPOH01000013.1 Protein Homology CDS 20064 21497 . + 0 ID=cds-WP_001534237.1;Parent=gene-CCO46_RS15730;Dbxref=GenBank:WP_001534237.1;Name=WP_001534237.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=CCO46_RS15730;product=anion permease;protein_id=WP_001534237.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 21600 23858 . + . ID=gene-CCO46_RS15735;Name=CCO46_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15735;old_locus_tag=CCO46_15725 NZ_NPOH01000013.1 Protein Homology CDS 21600 23858 . + 0 ID=cds-WP_000258265.1;Parent=gene-CCO46_RS15735;Dbxref=GenBank:WP_000258265.1;Name=WP_000258265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258265.1;locus_tag=CCO46_RS15735;product=hydratase;protein_id=WP_000258265.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 23919 25202 . - . ID=gene-CCO46_RS15740;Name=CCO46_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15740;old_locus_tag=CCO46_15730 NZ_NPOH01000013.1 Protein Homology CDS 23919 25202 . - 0 ID=cds-WP_001094776.1;Parent=gene-CCO46_RS15740;Dbxref=GenBank:WP_001094776.1;Name=WP_001094776.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=CCO46_RS15740;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094776.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 25440 26663 . + . ID=gene-CCO46_RS15745;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CCO46_RS15745;old_locus_tag=CCO46_15735 NZ_NPOH01000013.1 Protein Homology CDS 25440 26663 . + 0 ID=cds-WP_097363391.1;Parent=gene-CCO46_RS15745;Dbxref=GenBank:WP_097363391.1;Name=WP_097363391.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=CCO46_RS15745;product=imidazolonepropionase;protein_id=WP_097363391.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 26660 27601 . + . ID=gene-CCO46_RS15750;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CCO46_RS15750;old_locus_tag=CCO46_15740 NZ_NPOH01000013.1 Protein Homology CDS 26660 27601 . + 0 ID=cds-WP_023206973.1;Parent=gene-CCO46_RS15750;Dbxref=GenBank:WP_023206973.1;Name=WP_023206973.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=CCO46_RS15750;product=formimidoylglutamase;protein_id=WP_023206973.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 27646 28371 . + . ID=gene-CCO46_RS15755;Name=CCO46_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15755;old_locus_tag=CCO46_15745 NZ_NPOH01000013.1 Protein Homology CDS 27646 28371 . + 0 ID=cds-WP_097363392.1;Parent=gene-CCO46_RS15755;Dbxref=GenBank:WP_097363392.1;Name=WP_097363392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=CCO46_RS15755;product=histidine utilization repressor;protein_id=WP_097363392.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 28567 30252 . + . ID=gene-CCO46_RS15760;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CCO46_RS15760;old_locus_tag=CCO46_15750 NZ_NPOH01000013.1 Protein Homology CDS 28567 30252 . + 0 ID=cds-WP_001115209.1;Parent=gene-CCO46_RS15760;Dbxref=GenBank:WP_001115209.1;Name=WP_001115209.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=CCO46_RS15760;product=urocanate hydratase;protein_id=WP_001115209.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 30254 31774 . + . ID=gene-CCO46_RS15765;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CCO46_RS15765;old_locus_tag=CCO46_15755 NZ_NPOH01000013.1 Protein Homology CDS 30254 31774 . + 0 ID=cds-WP_076726307.1;Parent=gene-CCO46_RS15765;Dbxref=GenBank:WP_076726307.1;Name=WP_076726307.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=CCO46_RS15765;product=histidine ammonia-lyase;protein_id=WP_076726307.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 31859 32335 . - . ID=gene-CCO46_RS15770;Name=CCO46_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15770;old_locus_tag=CCO46_15760 NZ_NPOH01000013.1 Protein Homology CDS 31859 32335 . - 0 ID=cds-WP_000767403.1;Parent=gene-CCO46_RS15770;Dbxref=GenBank:WP_000767403.1;Name=WP_000767403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=CCO46_RS15770;product=kinase inhibitor;protein_id=WP_000767403.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 32393 33682 . - . ID=gene-CCO46_RS15775;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CCO46_RS15775;old_locus_tag=CCO46_15765 NZ_NPOH01000013.1 Protein Homology CDS 32393 33682 . - 0 ID=cds-WP_000205502.1;Parent=gene-CCO46_RS15775;Dbxref=GenBank:WP_000205502.1;Name=WP_000205502.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=CCO46_RS15775;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_000205502.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 33769 34809 . + . ID=gene-CCO46_RS15780;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CCO46_RS15780;old_locus_tag=CCO46_15770 NZ_NPOH01000013.1 Protein Homology CDS 33769 34809 . + 0 ID=cds-WP_080197998.1;Parent=gene-CCO46_RS15780;Dbxref=GenBank:WP_080197998.1;Name=WP_080197998.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=CCO46_RS15780;product=biotin synthase BioB;protein_id=WP_080197998.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 34806 35963 . + . ID=gene-CCO46_RS15785;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=CCO46_RS15785;old_locus_tag=CCO46_15775 NZ_NPOH01000013.1 Protein Homology CDS 34806 35963 . + 0 ID=cds-WP_080197997.1;Parent=gene-CCO46_RS15785;Dbxref=GenBank:WP_080197997.1;Name=WP_080197997.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=CCO46_RS15785;product=8-amino-7-oxononanoate synthase;protein_id=WP_080197997.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 35947 36702 . + . ID=gene-CCO46_RS15790;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=CCO46_RS15790;old_locus_tag=CCO46_15780 NZ_NPOH01000013.1 Protein Homology CDS 35947 36702 . + 0 ID=cds-WP_000079911.1;Parent=gene-CCO46_RS15790;Dbxref=GenBank:WP_000079911.1;Name=WP_000079911.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=CCO46_RS15790;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079911.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 36695 37381 . + . ID=gene-CCO46_RS15795;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO46_RS15795;old_locus_tag=CCO46_15785 NZ_NPOH01000013.1 Protein Homology CDS 36695 37381 . + 0 ID=cds-WP_097363393.1;Parent=gene-CCO46_RS15795;Dbxref=GenBank:WP_097363393.1;Name=WP_097363393.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=CCO46_RS15795;product=dethiobiotin synthase;protein_id=WP_097363393.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 38032 40053 . + . ID=gene-CCO46_RS15805;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CCO46_RS15805;old_locus_tag=CCO46_15795 NZ_NPOH01000013.1 Protein Homology CDS 38032 40053 . + 0 ID=cds-WP_097363394.1;Parent=gene-CCO46_RS15805;Dbxref=GenBank:WP_097363394.1;Name=WP_097363394.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=CCO46_RS15805;product=excinuclease ABC subunit UvrB;protein_id=WP_097363394.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 40140 41048 . - . ID=gene-CCO46_RS15810;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=CCO46_RS15810;old_locus_tag=CCO46_15800 NZ_NPOH01000013.1 Protein Homology CDS 40140 41048 . - 0 ID=cds-WP_001246033.1;Parent=gene-CCO46_RS15810;Dbxref=GenBank:WP_001246033.1;Name=WP_001246033.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=CCO46_RS15810;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246033.1;transl_table=11 NZ_NPOH01000013.1 cmsearch riboswitch 41313 41457 . + . ID=id-NZ_NPOH01000013.1:41313..41457;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPOH01000013.1 RefSeq gene 41445 42434 . + . ID=gene-CCO46_RS15815;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CCO46_RS15815;old_locus_tag=CCO46_15805 NZ_NPOH01000013.1 Protein Homology CDS 41445 42434 . + 0 ID=cds-WP_058331841.1;Parent=gene-CCO46_RS15815;Dbxref=GenBank:WP_058331841.1;Name=WP_058331841.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=CCO46_RS15815;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_058331841.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 42456 42968 . + . ID=gene-CCO46_RS15820;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=CCO46_RS15820;old_locus_tag=CCO46_15810 NZ_NPOH01000013.1 Protein Homology CDS 42456 42968 . + 0 ID=cds-WP_000084604.1;Parent=gene-CCO46_RS15820;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=CCO46_RS15820;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 42971 43456 . + . ID=gene-CCO46_RS15825;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CCO46_RS15825;old_locus_tag=CCO46_15815 NZ_NPOH01000013.1 Protein Homology CDS 42971 43456 . + 0 ID=cds-WP_000080894.1;Parent=gene-CCO46_RS15825;Dbxref=GenBank:WP_000080894.1;Name=WP_000080894.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=CCO46_RS15825;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080894.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 43449 43694 . + . ID=gene-CCO46_RS15830;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=CCO46_RS15830;old_locus_tag=CCO46_15820 NZ_NPOH01000013.1 Protein Homology CDS 43449 43694 . + 0 ID=cds-WP_000598596.1;Parent=gene-CCO46_RS15830;Dbxref=GenBank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=CCO46_RS15830;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 43696 44148 . + . ID=gene-CCO46_RS15835;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=CCO46_RS15835;old_locus_tag=CCO46_15825 NZ_NPOH01000013.1 Protein Homology CDS 43696 44148 . + 0 ID=cds-WP_001209384.1;Parent=gene-CCO46_RS15835;Dbxref=GenBank:WP_001209384.1;Name=WP_001209384.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=CCO46_RS15835;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_001209384.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 44196 44900 . + . ID=gene-CCO46_RS15840;Name=CCO46_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15840;old_locus_tag=CCO46_15830 NZ_NPOH01000013.1 Protein Homology CDS 44196 44900 . + 0 ID=cds-WP_000373611.1;Parent=gene-CCO46_RS15840;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=CCO46_RS15840;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 45046 45753 . + . ID=gene-CCO46_RS15850;Name=CCO46_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15850;old_locus_tag=CCO46_15840 NZ_NPOH01000013.1 Protein Homology CDS 45046 45753 . + 0 ID=cds-WP_097363405.1;Parent=gene-CCO46_RS15850;Dbxref=GenBank:WP_097363405.1;Name=WP_097363405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=CCO46_RS15850;product=Bax inhibitor-1 family protein;protein_id=WP_097363405.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 45777 46385 . + . ID=gene-CCO46_RS15855;Name=CCO46_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15855;old_locus_tag=CCO46_15845 NZ_NPOH01000013.1 Protein Homology CDS 45777 46385 . + 0 ID=cds-WP_079954612.1;Parent=gene-CCO46_RS15855;Dbxref=GenBank:WP_079954612.1;Name=WP_079954612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=CCO46_RS15855;product=hypothetical protein;protein_id=WP_079954612.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 46393 46953 . + . ID=gene-CCO46_RS15860;Name=CCO46_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15860;old_locus_tag=CCO46_15850 NZ_NPOH01000013.1 Protein Homology CDS 46393 46953 . + 0 ID=cds-WP_097363395.1;Parent=gene-CCO46_RS15860;Dbxref=GenBank:WP_097363395.1;Name=WP_097363395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=CCO46_RS15860;product=hypothetical protein;protein_id=WP_097363395.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 46956 47918 . - . ID=gene-CCO46_RS15865;Name=CCO46_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15865;old_locus_tag=CCO46_15855 NZ_NPOH01000013.1 Protein Homology CDS 46956 47918 . - 0 ID=cds-WP_097363396.1;Parent=gene-CCO46_RS15865;Dbxref=GenBank:WP_097363396.1;Name=WP_097363396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=CCO46_RS15865;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_097363396.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 47918 49159 . - . ID=gene-CCO46_RS15870;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=CCO46_RS15870;old_locus_tag=CCO46_15860 NZ_NPOH01000013.1 Protein Homology CDS 47918 49159 . - 0 ID=cds-WP_086812244.1;Parent=gene-CCO46_RS15870;Dbxref=GenBank:WP_086812244.1;Name=WP_086812244.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=CCO46_RS15870;product=cardiolipin synthase ClsB;protein_id=WP_086812244.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 49156 49914 . - . ID=gene-CCO46_RS15875;Name=CCO46_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15875;old_locus_tag=CCO46_15865 NZ_NPOH01000013.1 Protein Homology CDS 49156 49914 . - 0 ID=cds-WP_000192039.1;Parent=gene-CCO46_RS15875;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=CCO46_RS15875;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 50047 50457 . + . ID=gene-CCO46_RS15880;Name=CCO46_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15880;old_locus_tag=CCO46_15870 NZ_NPOH01000013.1 Protein Homology CDS 50047 50457 . + 0 ID=cds-WP_000871970.1;Parent=gene-CCO46_RS15880;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=CCO46_RS15880;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 50419 51525 . - . ID=gene-CCO46_RS15885;Name=CCO46_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15885;old_locus_tag=CCO46_15875 NZ_NPOH01000013.1 Protein Homology CDS 50419 51525 . - 0 ID=cds-WP_000469050.1;Parent=gene-CCO46_RS15885;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=CCO46_RS15885;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 51641 52771 . - . ID=gene-CCO46_RS15890;Name=CCO46_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15890;old_locus_tag=CCO46_15880 NZ_NPOH01000013.1 Protein Homology CDS 51641 52771 . - 0 ID=cds-WP_097363397.1;Parent=gene-CCO46_RS15890;Dbxref=GenBank:WP_097363397.1;Name=WP_097363397.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=CCO46_RS15890;product=ABC transporter permease;protein_id=WP_097363397.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 52764 54500 . - . ID=gene-CCO46_RS15895;Name=CCO46_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15895;old_locus_tag=CCO46_15885 NZ_NPOH01000013.1 Protein Homology CDS 52764 54500 . - 0 ID=cds-WP_001287612.1;Parent=gene-CCO46_RS15895;Dbxref=GenBank:WP_001287612.1;Name=WP_001287612.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=CCO46_RS15895;product=ATP-binding cassette domain-containing protein;protein_id=WP_001287612.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 54493 55488 . - . ID=gene-CCO46_RS15900;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=CCO46_RS15900;old_locus_tag=CCO46_15890 NZ_NPOH01000013.1 Protein Homology CDS 54493 55488 . - 0 ID=cds-WP_058331836.1;Parent=gene-CCO46_RS15900;Dbxref=GenBank:WP_058331836.1;Name=WP_058331836.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=CCO46_RS15900;product=secretion protein HlyD;protein_id=WP_058331836.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 55488 56162 . - . ID=gene-CCO46_RS15905;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=CCO46_RS15905;old_locus_tag=CCO46_15895 NZ_NPOH01000013.1 Protein Homology CDS 55488 56162 . - 0 ID=cds-WP_080250373.1;Parent=gene-CCO46_RS15905;Dbxref=GenBank:WP_080250373.1;Name=WP_080250373.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=CCO46_RS15905;product=transcriptional regulator CecR;protein_id=WP_080250373.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 56392 57753 . + . ID=gene-CCO46_RS15910;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=CCO46_RS15910;old_locus_tag=CCO46_15900 NZ_NPOH01000013.1 Protein Homology CDS 56392 57753 . + 0 ID=cds-WP_097363398.1;Parent=gene-CCO46_RS15910;Dbxref=GenBank:WP_097363398.1;Name=WP_097363398.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=CCO46_RS15910;product=ATP-dependent RNA helicase RhlE;protein_id=WP_097363398.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 57961 60105 . + . ID=gene-CCO46_RS15915;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=CCO46_RS15915;old_locus_tag=CCO46_15905 NZ_NPOH01000013.1 Protein Homology CDS 57961 60105 . + 0 ID=cds-WP_097363399.1;Parent=gene-CCO46_RS15915;Dbxref=GenBank:WP_097363399.1;Name=WP_097363399.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=CCO46_RS15915;product=ATP-dependent DNA helicase DinG;protein_id=WP_097363399.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 60135 61109 . + . ID=gene-CCO46_RS15920;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=CCO46_RS15920;old_locus_tag=CCO46_15910 NZ_NPOH01000013.1 Protein Homology CDS 60135 61109 . + 0 ID=cds-WP_097363400.1;Parent=gene-CCO46_RS15920;Dbxref=GenBank:WP_097363400.1;Name=WP_097363400.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=CCO46_RS15920;product=DNA-binding protein YbiB;protein_id=WP_097363400.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 61265 61525 . - . ID=gene-CCO46_RS15925;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=CCO46_RS15925;old_locus_tag=CCO46_15915 NZ_NPOH01000013.1 Protein Homology CDS 61265 61525 . - 0 ID=cds-WP_000849089.1;Parent=gene-CCO46_RS15925;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=CCO46_RS15925;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 61810 62076 . - . ID=gene-CCO46_RS15930;Name=CCO46_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15930;old_locus_tag=CCO46_15920 NZ_NPOH01000013.1 Protein Homology CDS 61810 62076 . - 0 ID=cds-WP_000146332.1;Parent=gene-CCO46_RS15930;Dbxref=GenBank:WP_000146332.1;Name=WP_000146332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=CCO46_RS15930;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146332.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 62281 63207 . + . ID=gene-CCO46_RS15935;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=CCO46_RS15935;old_locus_tag=CCO46_15925 NZ_NPOH01000013.1 Protein Homology CDS 62281 63207 . + 0 ID=cds-WP_001275964.1;Parent=gene-CCO46_RS15935;Dbxref=GenBank:WP_001275964.1;Name=WP_001275964.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=CCO46_RS15935;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275964.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 63204 65426 . - . ID=gene-CCO46_RS15940;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=CCO46_RS15940;old_locus_tag=CCO46_15930 NZ_NPOH01000013.1 Protein Homology CDS 63204 65426 . - 0 ID=cds-WP_097363401.1;Parent=gene-CCO46_RS15940;Dbxref=GenBank:WP_097363401.1;Name=WP_097363401.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=CCO46_RS15940;product=mechanosensitive channel protein;protein_id=WP_097363401.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 65545 66267 . - . ID=gene-CCO46_RS15945;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=CCO46_RS15945;old_locus_tag=CCO46_15935 NZ_NPOH01000013.1 Protein Homology CDS 65545 66267 . - 0 ID=cds-WP_000569093.1;Parent=gene-CCO46_RS15945;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=CCO46_RS15945;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 66264 66923 . - . ID=gene-CCO46_RS15950;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=CCO46_RS15950;old_locus_tag=CCO46_15940 NZ_NPOH01000013.1 Protein Homology CDS 66264 66923 . - 0 ID=cds-WP_001159076.1;Parent=gene-CCO46_RS15950;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=CCO46_RS15950;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 67069 67815 . - . ID=gene-CCO46_RS15955;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=CCO46_RS15955;old_locus_tag=CCO46_15945 NZ_NPOH01000013.1 Protein Homology CDS 67069 67815 . - 0 ID=cds-WP_000838671.1;Parent=gene-CCO46_RS15955;Dbxref=GenBank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=CCO46_RS15955;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 68292 68795 . - . ID=gene-CCO46_RS15960;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=CCO46_RS15960;old_locus_tag=CCO46_15950 NZ_NPOH01000013.1 Protein Homology CDS 68292 68795 . - 0 ID=cds-WP_000100805.1;Parent=gene-CCO46_RS15960;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=CCO46_RS15960;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 69098 69985 . - . ID=gene-CCO46_RS15965;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=CCO46_RS15965;old_locus_tag=CCO46_15955 NZ_NPOH01000013.1 Protein Homology CDS 69098 69985 . - 0 ID=cds-WP_001119555.1;Parent=gene-CCO46_RS15965;Dbxref=GenBank:WP_001119555.1;Name=WP_001119555.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=CCO46_RS15965;product=threonine/homoserine exporter RhtA;protein_id=WP_001119555.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 70338 70853 . + . ID=gene-CCO46_RS15970;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=CCO46_RS15970;old_locus_tag=CCO46_15960 NZ_NPOH01000013.1 Protein Homology CDS 70338 70853 . + 0 ID=cds-WP_000716763.1;Parent=gene-CCO46_RS15970;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=CCO46_RS15970;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 70916 72496 . - . ID=gene-CCO46_RS15975;Name=CCO46_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15975;old_locus_tag=CCO46_15965 NZ_NPOH01000013.1 Protein Homology CDS 70916 72496 . - 0 ID=cds-WP_001089327.1;Parent=gene-CCO46_RS15975;Dbxref=GenBank:WP_001089327.1;Name=WP_001089327.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=CCO46_RS15975;product=phosphoethanolamine transferase;protein_id=WP_001089327.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 72761 72889 . - . ID=gene-CCO46_RS15980;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=CCO46_RS15980;old_locus_tag=CCO46_15970 NZ_NPOH01000013.1 Protein Homology CDS 72761 72889 . - 0 ID=cds-WP_001001755.1;Parent=gene-CCO46_RS15980;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=CCO46_RS15980;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 73075 73548 . + . ID=gene-CCO46_RS15985;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=CCO46_RS15985;old_locus_tag=CCO46_15975 NZ_NPOH01000013.1 Protein Homology CDS 73075 73548 . + 0 ID=cds-WP_000533542.1;Parent=gene-CCO46_RS15985;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=CCO46_RS15985;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 73545 74657 . + . ID=gene-CCO46_RS15990;Name=CCO46_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS15990;old_locus_tag=CCO46_15980 NZ_NPOH01000013.1 Protein Homology CDS 73545 74657 . + 0 ID=cds-WP_001534219.1;Parent=gene-CCO46_RS15990;Dbxref=GenBank:WP_001534219.1;Name=WP_001534219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=CCO46_RS15990;product=anion transporter;protein_id=WP_001534219.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 74701 75621 . - . ID=gene-CCO46_RS15995;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=CCO46_RS15995;old_locus_tag=CCO46_15985 NZ_NPOH01000013.1 Protein Homology CDS 74701 75621 . - 0 ID=cds-WP_001056404.1;Parent=gene-CCO46_RS15995;Dbxref=GenBank:WP_001056404.1;Name=WP_001056404.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=CCO46_RS15995;product=L%2CD-transpeptidase;protein_id=WP_001056404.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 75841 77433 . + . ID=gene-CCO46_RS16000;Name=CCO46_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16000;old_locus_tag=CCO46_15990 NZ_NPOH01000013.1 Protein Homology CDS 75841 77433 . + 0 ID=cds-WP_000961479.1;Parent=gene-CCO46_RS16000;Dbxref=GenBank:WP_000961479.1;Name=WP_000961479.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=CCO46_RS16000;product=ABC-F family ATPase;protein_id=WP_000961479.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 77981 78724 . + . ID=gene-CCO46_RS16010;Name=CCO46_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16010;old_locus_tag=CCO46_16000 NZ_NPOH01000013.1 Protein Homology CDS 77981 78724 . + 0 ID=cds-WP_010988985.1;Parent=gene-CCO46_RS16010;Dbxref=GenBank:WP_010988985.1;Name=WP_010988985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=CCO46_RS16010;product=DUF4261 domain-containing protein;protein_id=WP_010988985.1;transl_table=11 NZ_NPOH01000013.1 RefSeq pseudogene 78753 79484 . - . ID=gene-CCO46_RS16015;Name=CCO46_RS16015;end_range=79484,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS16015;old_locus_tag=CCO46_16005;partial=true;pseudo=true NZ_NPOH01000013.1 Protein Homology CDS 78753 79484 . - 0 ID=cds-CCO46_RS16015;Parent=gene-CCO46_RS16015;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;end_range=79484,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=CCO46_RS16015;partial=true;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 NZ_NPOH01000013.1 RefSeq pseudogene 79481 79558 . + . ID=gene-CCO46_RS25885;Name=CCO46_RS25885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25885;partial=true;pseudo=true;start_range=.,79481 NZ_NPOH01000013.1 Protein Homology CDS 79481 79558 . + 0 ID=cds-CCO46_RS25885;Parent=gene-CCO46_RS25885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=CCO46_RS25885;partial=true;product=hypothetical protein;pseudo=true;start_range=.,79481;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 79680 80945 . - . ID=gene-CCO46_RS16020;Name=CCO46_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16020;old_locus_tag=CCO46_16010 NZ_NPOH01000013.1 Protein Homology CDS 79680 80945 . - 0 ID=cds-WP_000210946.1;Parent=gene-CCO46_RS16020;Dbxref=GenBank:WP_000210946.1;Name=WP_000210946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=CCO46_RS16020;product=DUF1479 domain-containing protein;protein_id=WP_000210946.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 81207 82016 . + . ID=gene-CCO46_RS16025;Name=CCO46_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16025;old_locus_tag=CCO46_16015 NZ_NPOH01000013.1 Protein Homology CDS 81207 82016 . + 0 ID=cds-WP_000217910.1;Parent=gene-CCO46_RS16025;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=CCO46_RS16025;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 82094 84526 . - . ID=gene-CCO46_RS16030;Name=CCO46_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16030;old_locus_tag=CCO46_16020 NZ_NPOH01000013.1 Protein Homology CDS 82094 84526 . - 0 ID=cds-WP_023993608.1;Parent=gene-CCO46_RS16030;Dbxref=GenBank:WP_023993608.1;Name=WP_023993608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=CCO46_RS16030;product=glycyl radical protein;protein_id=WP_023993608.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 84532 85431 . - . ID=gene-CCO46_RS16035;Name=CCO46_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16035;old_locus_tag=CCO46_16025 NZ_NPOH01000013.1 Protein Homology CDS 84532 85431 . - 0 ID=cds-WP_000576951.1;Parent=gene-CCO46_RS16035;Dbxref=GenBank:WP_000576951.1;Name=WP_000576951.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=CCO46_RS16035;product=glycyl-radical enzyme activating protein;protein_id=WP_000576951.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 85709 86458 . - . ID=gene-CCO46_RS16040;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=CCO46_RS16040;old_locus_tag=CCO46_16030 NZ_NPOH01000013.1 Protein Homology CDS 85709 86458 . - 0 ID=cds-WP_000829280.1;Parent=gene-CCO46_RS16040;Dbxref=GenBank:WP_000829280.1;Name=WP_000829280.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=CCO46_RS16040;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829280.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 86458 87693 . - . ID=gene-CCO46_RS16045;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=CCO46_RS16045;old_locus_tag=CCO46_16035 NZ_NPOH01000013.1 Protein Homology CDS 86458 87693 . - 0 ID=cds-WP_000395794.1;Parent=gene-CCO46_RS16045;Dbxref=GenBank:WP_000395794.1;Name=WP_000395794.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=CCO46_RS16045;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000395794.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 87897 88838 . + . ID=gene-CCO46_RS16050;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=CCO46_RS16050;old_locus_tag=CCO46_16040 NZ_NPOH01000013.1 Protein Homology CDS 87897 88838 . + 0 ID=cds-WP_001030503.1;Parent=gene-CCO46_RS16050;Dbxref=GenBank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=CCO46_RS16050;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 88849 90720 . + . ID=gene-CCO46_RS16055;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=CCO46_RS16055;old_locus_tag=CCO46_16045 NZ_NPOH01000013.1 Protein Homology CDS 88849 90720 . + 0 ID=cds-WP_058331831.1;Parent=gene-CCO46_RS16055;Dbxref=GenBank:WP_058331831.1;Name=WP_058331831.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=CCO46_RS16055;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_058331831.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 90753 92291 . + . ID=gene-CCO46_RS16060;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=CCO46_RS16060;old_locus_tag=CCO46_16050 NZ_NPOH01000013.1 Protein Homology CDS 90753 92291 . + 0 ID=cds-WP_000191427.1;Parent=gene-CCO46_RS16060;Dbxref=GenBank:WP_000191427.1;Name=WP_000191427.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=CCO46_RS16060;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191427.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 92352 93272 . + . ID=gene-CCO46_RS16065;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=CCO46_RS16065;old_locus_tag=CCO46_16055 NZ_NPOH01000013.1 Protein Homology CDS 92352 93272 . + 0 ID=cds-WP_000936067.1;Parent=gene-CCO46_RS16065;Dbxref=GenBank:WP_000936067.1;Name=WP_000936067.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=CCO46_RS16065;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936067.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 93275 94186 . + . ID=gene-CCO46_RS16070;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=CCO46_RS16070;old_locus_tag=CCO46_16060 NZ_NPOH01000013.1 Protein Homology CDS 93275 94186 . + 0 ID=cds-WP_001236024.1;Parent=gene-CCO46_RS16070;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=CCO46_RS16070;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 94277 95602 . - . ID=gene-CCO46_RS16075;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=CCO46_RS16075;old_locus_tag=CCO46_16065 NZ_NPOH01000013.1 Protein Homology CDS 94277 95602 . - 0 ID=cds-WP_058331830.1;Parent=gene-CCO46_RS16075;Dbxref=GenBank:WP_058331830.1;Name=WP_058331830.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=CCO46_RS16075;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_058331830.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 95833 96216 . + . ID=gene-CCO46_RS16080;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=CCO46_RS16080;old_locus_tag=CCO46_16070 NZ_NPOH01000013.1 Protein Homology CDS 95833 96216 . + 0 ID=cds-WP_000259651.1;Parent=gene-CCO46_RS16080;Dbxref=GenBank:WP_000259651.1;Name=WP_000259651.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=CCO46_RS16080;product=biofilm formation regulator BssR;protein_id=WP_000259651.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 96334 97455 . + . ID=gene-CCO46_RS16085;Name=CCO46_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16085;old_locus_tag=CCO46_16075 NZ_NPOH01000013.1 Protein Homology CDS 96334 97455 . + 0 ID=cds-WP_097363402.1;Parent=gene-CCO46_RS16085;Dbxref=GenBank:WP_097363402.1;Name=WP_097363402.1;Ontology_term=GO:0016901,GO:0070968;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=CCO46_RS16085;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_097363402.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 97452 98078 . - . ID=gene-CCO46_RS16090;Name=CCO46_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16090;old_locus_tag=CCO46_16080 NZ_NPOH01000013.1 Protein Homology CDS 97452 98078 . - 0 ID=cds-WP_000631910.1;Parent=gene-CCO46_RS16090;Dbxref=GenBank:WP_000631910.1;Name=WP_000631910.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=CCO46_RS16090;product=glutathione S-transferase family protein;protein_id=WP_000631910.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 98322 99524 . + . ID=gene-CCO46_RS16095;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=CCO46_RS16095;old_locus_tag=CCO46_16085 NZ_NPOH01000013.1 Protein Homology CDS 98322 99524 . + 0 ID=cds-WP_000195712.1;Parent=gene-CCO46_RS16095;Dbxref=GenBank:WP_000195712.1;Name=WP_000195712.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=CCO46_RS16095;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195712.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 99569 100327 . - . ID=gene-CCO46_RS16100;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=CCO46_RS16100;old_locus_tag=CCO46_16090 NZ_NPOH01000013.1 Protein Homology CDS 99569 100327 . - 0 ID=cds-WP_000450106.1;Parent=gene-CCO46_RS16100;Dbxref=GenBank:WP_000450106.1;Name=WP_000450106.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=CCO46_RS16100;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450106.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 100399 101007 . - . ID=gene-CCO46_RS16105;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=CCO46_RS16105;old_locus_tag=CCO46_16095 NZ_NPOH01000013.1 Protein Homology CDS 100399 101007 . - 0 ID=cds-WP_001531378.1;Parent=gene-CCO46_RS16105;Dbxref=GenBank:WP_001531378.1;Name=WP_001531378.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=CCO46_RS16105;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001531378.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 101320 102552 . + . ID=gene-CCO46_RS16110;Name=CCO46_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16110;old_locus_tag=CCO46_16100 NZ_NPOH01000013.1 Protein Homology CDS 101320 102552 . + 0 ID=cds-WP_001181284.1;Parent=gene-CCO46_RS16110;Dbxref=GenBank:WP_001181284.1;Name=WP_001181284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=CCO46_RS16110;product=MFS transporter;protein_id=WP_001181284.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 102606 103421 . - . ID=gene-CCO46_RS16115;Name=CCO46_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16115;old_locus_tag=CCO46_16105 NZ_NPOH01000013.1 Protein Homology CDS 102606 103421 . - 0 ID=cds-WP_094887797.1;Parent=gene-CCO46_RS16115;Dbxref=GenBank:WP_094887797.1;Name=WP_094887797.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=CCO46_RS16115;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_094887797.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 103418 104629 . - . ID=gene-CCO46_RS16120;Name=CCO46_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16120;old_locus_tag=CCO46_16110 NZ_NPOH01000013.1 Protein Homology CDS 103418 104629 . - 0 ID=cds-WP_000217418.1;Parent=gene-CCO46_RS16120;Dbxref=GenBank:WP_000217418.1;Name=WP_000217418.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=CCO46_RS16120;product=MFS transporter;protein_id=WP_000217418.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 104797 105357 . + . ID=gene-CCO46_RS16125;Name=CCO46_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16125;old_locus_tag=CCO46_16115 NZ_NPOH01000013.1 Protein Homology CDS 104797 105357 . + 0 ID=cds-WP_023209113.1;Parent=gene-CCO46_RS16125;Dbxref=GenBank:WP_023209113.1;Name=WP_023209113.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661880.1;locus_tag=CCO46_RS16125;product=TetR/AcrR family transcriptional regulator;protein_id=WP_023209113.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 105534 107219 . - . ID=gene-CCO46_RS16135;Name=CCO46_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16135;old_locus_tag=CCO46_16120 NZ_NPOH01000013.1 Protein Homology CDS 105534 107219 . - 0 ID=cds-WP_001024853.1;Parent=gene-CCO46_RS16135;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=CCO46_RS16135;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 107490 107867 . + . ID=gene-CCO46_RS16140;Name=CCO46_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16140;old_locus_tag=CCO46_16125 NZ_NPOH01000013.1 Protein Homology CDS 107490 107867 . + 0 ID=cds-WP_000680850.1;Parent=gene-CCO46_RS16140;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=CCO46_RS16140;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 107899 108162 . - . ID=gene-CCO46_RS16145;Name=CCO46_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16145;old_locus_tag=CCO46_16130 NZ_NPOH01000013.1 Protein Homology CDS 107899 108162 . - 0 ID=cds-WP_000495513.1;Parent=gene-CCO46_RS16145;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=CCO46_RS16145;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 108332 108622 . + . ID=gene-CCO46_RS16150;Name=CCO46_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16150;old_locus_tag=CCO46_16135 NZ_NPOH01000013.1 Protein Homology CDS 108332 108622 . + 0 ID=cds-WP_001259137.1;Parent=gene-CCO46_RS16150;Dbxref=GenBank:WP_001259137.1;Name=WP_001259137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=CCO46_RS16150;product=YbjC family protein;protein_id=WP_001259137.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 108606 109328 . + . ID=gene-CCO46_RS16155;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CCO46_RS16155;old_locus_tag=CCO46_16140 NZ_NPOH01000013.1 Protein Homology CDS 108606 109328 . + 0 ID=cds-WP_000075300.1;Parent=gene-CCO46_RS16155;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=CCO46_RS16155;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 109386 110288 . + . ID=gene-CCO46_RS16160;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=CCO46_RS16160;old_locus_tag=CCO46_16145 NZ_NPOH01000013.1 Protein Homology CDS 109386 110288 . + 0 ID=cds-WP_000684361.1;Parent=gene-CCO46_RS16160;Dbxref=GenBank:WP_000684361.1;Name=WP_000684361.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=CCO46_RS16160;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 110385 110861 . + . ID=gene-CCO46_RS16165;Name=CCO46_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16165;old_locus_tag=CCO46_16150 NZ_NPOH01000013.1 Protein Homology CDS 110385 110861 . + 0 ID=cds-WP_000624810.1;Parent=gene-CCO46_RS16165;Dbxref=GenBank:WP_000624810.1;Name=WP_000624810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=CCO46_RS16165;product=YbjN domain-containing protein;protein_id=WP_000624810.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 111210 112322 . + . ID=gene-CCO46_RS16170;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=CCO46_RS16170;old_locus_tag=CCO46_16155 NZ_NPOH01000013.1 Protein Homology CDS 111210 112322 . + 0 ID=cds-WP_000125769.1;Parent=gene-CCO46_RS16170;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=CCO46_RS16170;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 112410 113543 . + . ID=gene-CCO46_RS16175;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=CCO46_RS16175;old_locus_tag=CCO46_16160 NZ_NPOH01000013.1 Protein Homology CDS 112410 113543 . + 0 ID=cds-WP_097363403.1;Parent=gene-CCO46_RS16175;Dbxref=GenBank:WP_097363403.1;Name=WP_097363403.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=CCO46_RS16175;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_097363403.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 113553 114506 . + . ID=gene-CCO46_RS16180;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=CCO46_RS16180;old_locus_tag=CCO46_16165 NZ_NPOH01000013.1 Protein Homology CDS 113553 114506 . + 0 ID=cds-WP_000105453.1;Parent=gene-CCO46_RS16180;Dbxref=GenBank:WP_000105453.1;Name=WP_000105453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=CCO46_RS16180;product=putrescine ABC transporter permease PotH;protein_id=WP_000105453.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 114503 115348 . + . ID=gene-CCO46_RS16185;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=CCO46_RS16185;old_locus_tag=CCO46_16170 NZ_NPOH01000013.1 Protein Homology CDS 114503 115348 . + 0 ID=cds-WP_001061629.1;Parent=gene-CCO46_RS16185;Dbxref=GenBank:WP_001061629.1;Name=WP_001061629.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=CCO46_RS16185;product=putrescine ABC transporter permease PotI;protein_id=WP_001061629.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 115422 115895 . + . ID=gene-CCO46_RS16190;Name=CCO46_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16190;old_locus_tag=CCO46_16175 NZ_NPOH01000013.1 Protein Homology CDS 115422 115895 . + 0 ID=cds-WP_000505788.1;Parent=gene-CCO46_RS16190;Dbxref=GenBank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=CCO46_RS16190;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 115938 117065 . + . ID=gene-CCO46_RS16195;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=CCO46_RS16195;old_locus_tag=CCO46_16180 NZ_NPOH01000013.1 Protein Homology CDS 115938 117065 . + 0 ID=cds-WP_058331309.1;Parent=gene-CCO46_RS16195;Dbxref=GenBank:WP_058331309.1;Name=WP_058331309.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=CCO46_RS16195;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_058331309.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 117360 118703 . + . ID=gene-CCO46_RS16200;Name=CCO46_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16200;old_locus_tag=CCO46_16185 NZ_NPOH01000013.1 Protein Homology CDS 117360 118703 . + 0 ID=cds-WP_000399318.1;Parent=gene-CCO46_RS16200;Dbxref=GenBank:WP_000399318.1;Name=WP_000399318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=CCO46_RS16200;product=PTS sugar transporter subunit IIC;protein_id=WP_000399318.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 118733 119053 . + . ID=gene-CCO46_RS16205;Name=CCO46_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16205;old_locus_tag=CCO46_16190 NZ_NPOH01000013.1 Protein Homology CDS 118733 119053 . + 0 ID=cds-WP_000655399.1;Parent=gene-CCO46_RS16205;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=CCO46_RS16205;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 119063 120550 . + . ID=gene-CCO46_RS16210;Name=CCO46_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16210;old_locus_tag=CCO46_16195 NZ_NPOH01000013.1 Protein Homology CDS 119063 120550 . + 0 ID=cds-WP_058331310.1;Parent=gene-CCO46_RS16210;Dbxref=GenBank:WP_058331310.1;Name=WP_058331310.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=CCO46_RS16210;product=sulfatase;protein_id=WP_058331310.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 120754 121485 . - . ID=gene-CCO46_RS16215;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=CCO46_RS16215;old_locus_tag=CCO46_16200 NZ_NPOH01000013.1 Protein Homology CDS 120754 121485 . - 0 ID=cds-WP_058331311.1;Parent=gene-CCO46_RS16215;Dbxref=GenBank:WP_058331311.1;Name=WP_058331311.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=CCO46_RS16215;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_058331311.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 121722 122390 . - . ID=gene-CCO46_RS16220;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=CCO46_RS16220;old_locus_tag=CCO46_16205 NZ_NPOH01000013.1 Protein Homology CDS 121722 122390 . - 0 ID=cds-WP_000895393.1;Parent=gene-CCO46_RS16220;Dbxref=GenBank:WP_000895393.1;Name=WP_000895393.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=CCO46_RS16220;product=arginine ABC transporter permease ArtM;protein_id=WP_000895393.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 122390 123106 . - . ID=gene-CCO46_RS16225;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=CCO46_RS16225;old_locus_tag=CCO46_16210 NZ_NPOH01000013.1 Protein Homology CDS 122390 123106 . - 0 ID=cds-WP_001001677.1;Parent=gene-CCO46_RS16225;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=CCO46_RS16225;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 123113 123844 . - . ID=gene-CCO46_RS16230;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=CCO46_RS16230;old_locus_tag=CCO46_16215 NZ_NPOH01000013.1 Protein Homology CDS 123113 123844 . - 0 ID=cds-WP_000756587.1;Parent=gene-CCO46_RS16230;Dbxref=GenBank:WP_000756587.1;Name=WP_000756587.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=CCO46_RS16230;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756587.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 123862 124590 . - . ID=gene-CCO46_RS16235;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=CCO46_RS16235;old_locus_tag=CCO46_16220 NZ_NPOH01000013.1 Protein Homology CDS 123862 124590 . - 0 ID=cds-WP_000027186.1;Parent=gene-CCO46_RS16235;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=CCO46_RS16235;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 124819 125334 . - . ID=gene-CCO46_RS16240;Name=CCO46_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16240;old_locus_tag=CCO46_16225 NZ_NPOH01000013.1 Protein Homology CDS 124819 125334 . - 0 ID=cds-WP_058331312.1;Parent=gene-CCO46_RS16240;Dbxref=GenBank:WP_058331312.1;Name=WP_058331312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=CCO46_RS16240;product=lipoprotein;protein_id=WP_058331312.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 125462 125785 . + . ID=gene-CCO46_RS16245;Name=CCO46_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16245;old_locus_tag=CCO46_16230 NZ_NPOH01000013.1 Protein Homology CDS 125462 125785 . + 0 ID=cds-WP_001160725.1;Parent=gene-CCO46_RS16245;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO46_RS16245;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 125782 126612 . + . ID=gene-CCO46_RS16250;Name=CCO46_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16250;old_locus_tag=CCO46_16235 NZ_NPOH01000013.1 Protein Homology CDS 125782 126612 . + 0 ID=cds-WP_058331313.1;Parent=gene-CCO46_RS16250;Dbxref=GenBank:WP_058331313.1;Name=WP_058331313.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=CCO46_RS16250;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_058331313.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 126609 127622 . - . ID=gene-CCO46_RS16255;Name=CCO46_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16255;old_locus_tag=CCO46_16240 NZ_NPOH01000013.1 Protein Homology CDS 126609 127622 . - 0 ID=cds-WP_000866904.1;Parent=gene-CCO46_RS16255;Dbxref=GenBank:WP_000866904.1;Name=WP_000866904.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=CCO46_RS16255;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_000866904.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 127718 129151 . - . ID=gene-CCO46_RS16260;Name=CCO46_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16260;old_locus_tag=CCO46_16245 NZ_NPOH01000013.1 Protein Homology CDS 127718 129151 . - 0 ID=cds-WP_058331322.1;Parent=gene-CCO46_RS16260;Dbxref=GenBank:WP_058331322.1;Name=WP_058331322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=CCO46_RS16260;product=SDR family oxidoreductase;protein_id=WP_058331322.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 129162 130163 . - . ID=gene-CCO46_RS16265;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=CCO46_RS16265;old_locus_tag=CCO46_16250 NZ_NPOH01000013.1 Protein Homology CDS 129162 130163 . - 0 ID=cds-WP_058331323.1;Parent=gene-CCO46_RS16265;Dbxref=GenBank:WP_058331323.1;Name=WP_058331323.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=CCO46_RS16265;product=low-specificity L-threonine aldolase;protein_id=WP_058331323.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 130202 131920 . - . ID=gene-CCO46_RS16270;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=CCO46_RS16270;old_locus_tag=CCO46_16255 NZ_NPOH01000013.1 Protein Homology CDS 130202 131920 . - 0 ID=cds-WP_097363404.1;Parent=gene-CCO46_RS16270;Dbxref=GenBank:WP_097363404.1;Name=WP_097363404.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=CCO46_RS16270;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_097363404.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 132078 133046 . - . ID=gene-CCO46_RS16275;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=CCO46_RS16275;old_locus_tag=CCO46_16260 NZ_NPOH01000013.1 Protein Homology CDS 132078 133046 . - 0 ID=cds-WP_023216393.1;Parent=gene-CCO46_RS16275;Dbxref=GenBank:WP_023216393.1;Name=WP_023216393.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=CCO46_RS16275;product=NADH oxidoreductase;protein_id=WP_023216393.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 133058 134710 . - . ID=gene-CCO46_RS16280;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=CCO46_RS16280;old_locus_tag=CCO46_16265 NZ_NPOH01000013.1 Protein Homology CDS 133058 134710 . - 0 ID=cds-WP_000458785.1;Parent=gene-CCO46_RS16280;Dbxref=GenBank:WP_000458785.1;Name=WP_000458785.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=CCO46_RS16280;product=hydroxylamine reductase;protein_id=WP_000458785.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 134854 135753 . - . ID=gene-CCO46_RS16285;Name=CCO46_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16285;old_locus_tag=CCO46_16270 NZ_NPOH01000013.1 Protein Homology CDS 134854 135753 . - 0 ID=cds-WP_000491118.1;Parent=gene-CCO46_RS16285;Dbxref=GenBank:WP_000491118.1;Name=WP_000491118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=CCO46_RS16285;product=lysine exporter LysO family protein;protein_id=WP_000491118.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 135955 137613 . + . ID=gene-CCO46_RS16295;Name=CCO46_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16295;old_locus_tag=CCO46_16280 NZ_NPOH01000013.1 Protein Homology CDS 135955 137613 . + 0 ID=cds-WP_000599765.1;Parent=gene-CCO46_RS16295;Dbxref=GenBank:WP_000599765.1;Name=WP_000599765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=CCO46_RS16295;product=ATP-dependent endonuclease;protein_id=WP_000599765.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 137610 138560 . - . ID=gene-CCO46_RS16300;Name=CCO46_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16300;old_locus_tag=CCO46_16285 NZ_NPOH01000013.1 Protein Homology CDS 137610 138560 . - 0 ID=cds-WP_058331324.1;Parent=gene-CCO46_RS16300;Dbxref=GenBank:WP_058331324.1;Name=WP_058331324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=CCO46_RS16300;product=VirK/YbjX family protein;protein_id=WP_058331324.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 138706 139824 . + . ID=gene-CCO46_RS16305;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=CCO46_RS16305;old_locus_tag=CCO46_16290 NZ_NPOH01000013.1 Protein Homology CDS 138706 139824 . + 0 ID=cds-WP_023202044.1;Parent=gene-CCO46_RS16305;Dbxref=GenBank:WP_023202044.1;Name=WP_023202044.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=CCO46_RS16305;product=macrolide transporter subunit MacA;protein_id=WP_023202044.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 139821 141767 . + . ID=gene-CCO46_RS16310;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=CCO46_RS16310;old_locus_tag=CCO46_16295 NZ_NPOH01000013.1 Protein Homology CDS 139821 141767 . + 0 ID=cds-WP_000125893.1;Parent=gene-CCO46_RS16310;Dbxref=GenBank:WP_000125893.1;Name=WP_000125893.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=CCO46_RS16310;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000125893.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 141897 142118 . - . ID=gene-CCO46_RS16320;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=CCO46_RS16320;old_locus_tag=CCO46_16305 NZ_NPOH01000013.1 Protein Homology CDS 141897 142118 . - 0 ID=cds-WP_000447499.1;Parent=gene-CCO46_RS16320;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=CCO46_RS16320;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 142269 142346 . + . ID=gene-CCO46_RS25535;Name=CCO46_RS25535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25535 NZ_NPOH01000013.1 Protein Homology CDS 142269 142346 . + 0 ID=cds-WP_212742690.1;Parent=gene-CCO46_RS25535;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=CCO46_RS25535;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 142442 142762 . + . ID=gene-CCO46_RS16325;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=CCO46_RS16325;old_locus_tag=CCO46_16310 NZ_NPOH01000013.1 Protein Homology CDS 142442 142762 . + 0 ID=cds-WP_000520789.1;Parent=gene-CCO46_RS16325;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=CCO46_RS16325;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 142793 145069 . + . ID=gene-CCO46_RS16330;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=CCO46_RS16330;old_locus_tag=CCO46_16315 NZ_NPOH01000013.1 Protein Homology CDS 142793 145069 . + 0 ID=cds-WP_000934064.1;Parent=gene-CCO46_RS16330;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=CCO46_RS16330;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11 NZ_NPOH01000013.1 RefSeq gene 145281 145478 . - . ID=gene-CCO46_RS16335;Name=CCO46_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16335;old_locus_tag=CCO46_16320 NZ_NPOH01000013.1 Protein Homology CDS 145281 145478 . - 0 ID=cds-WP_001117984.1;Parent=gene-CCO46_RS16335;Dbxref=GenBank:WP_001117984.1;Name=WP_001117984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=CCO46_RS16335;product=hypothetical protein;protein_id=WP_001117984.1;transl_table=11 NZ_NPOH01000013.1 RefSeq pseudogene 145640 145996 . - . ID=gene-CCO46_RS16340;Name=CCO46_RS16340;end_range=145996,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS16340;old_locus_tag=CCO46_16325;partial=true;pseudo=true NZ_NPOH01000013.1 Protein Homology CDS 145640 145996 . - 0 ID=cds-CCO46_RS16340;Parent=gene-CCO46_RS16340;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=145996,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524896.1;locus_tag=CCO46_RS16340;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 ##sequence-region NZ_NPOH01000014.1 1 143440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000014.1 RefSeq region 1 143440 . + . ID=NZ_NPOH01000014.1:1..143440;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000014.1 RefSeq gene 207 283 . - . ID=gene-CCO46_RS16355;Name=CCO46_RS16355;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS16355;old_locus_tag=CCO46_16340 NZ_NPOH01000014.1 tRNAscan-SE tRNA 207 283 . - . ID=rna-CCO46_RS16355;Parent=gene-CCO46_RS16355;anticodon=(pos:complement(247..249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS16355;product=tRNA-Arg NZ_NPOH01000014.1 tRNAscan-SE exon 207 283 . - . ID=exon-CCO46_RS16355-1;Parent=rna-CCO46_RS16355;anticodon=(pos:complement(247..249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS16355;product=tRNA-Arg NZ_NPOH01000014.1 RefSeq gene 538 1134 . + . ID=gene-CCO46_RS16365;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=CCO46_RS16365;old_locus_tag=CCO46_16350 NZ_NPOH01000014.1 Protein Homology CDS 538 1134 . + 0 ID=cds-WP_001523348.1;Parent=gene-CCO46_RS16365;Dbxref=GenBank:WP_001523348.1;Name=WP_001523348.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=CCO46_RS16365;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_001523348.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 1296 1607 . + . ID=gene-CCO46_RS16370;Name=CCO46_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16370;old_locus_tag=CCO46_16355 NZ_NPOH01000014.1 Protein Homology CDS 1296 1607 . + 0 ID=cds-WP_000226497.1;Parent=gene-CCO46_RS16370;Dbxref=GenBank:WP_000226497.1;Name=WP_000226497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=CCO46_RS16370;product=diguanylate cyclase;protein_id=WP_000226497.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 1626 2348 . + . ID=gene-CCO46_RS16375;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=CCO46_RS16375;old_locus_tag=CCO46_16360 NZ_NPOH01000014.1 Protein Homology CDS 1626 2348 . + 0 ID=cds-WP_023201977.1;Parent=gene-CCO46_RS16375;Dbxref=GenBank:WP_023201977.1;Name=WP_023201977.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=CCO46_RS16375;product=fimbria biosynthesis regulator FimY;protein_id=WP_023201977.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 2952 3584 . + . ID=gene-CCO46_RS16380;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=CCO46_RS16380;old_locus_tag=CCO46_16365 NZ_NPOH01000014.1 Protein Homology CDS 2952 3584 . + 0 ID=cds-WP_000801273.1;Parent=gene-CCO46_RS16380;Dbxref=GenBank:WP_000801273.1;Name=WP_000801273.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=CCO46_RS16380;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801273.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 3630 4148 . - . ID=gene-CCO46_RS16385;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=CCO46_RS16385;old_locus_tag=CCO46_16370 NZ_NPOH01000014.1 Protein Homology CDS 3630 4148 . - 0 ID=cds-WP_000577507.1;Parent=gene-CCO46_RS16385;Dbxref=GenBank:WP_000577507.1;Name=WP_000577507.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=CCO46_RS16385;product=fimbria assembly protein;protein_id=WP_000577507.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 4158 5165 . - . ID=gene-CCO46_RS16390;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=CCO46_RS16390;old_locus_tag=CCO46_16375 NZ_NPOH01000014.1 Protein Homology CDS 4158 5165 . - 0 ID=cds-WP_058331297.1;Parent=gene-CCO46_RS16390;Dbxref=GenBank:WP_058331297.1;Name=WP_058331297.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=CCO46_RS16390;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_058331297.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 5180 7792 . - . ID=gene-CCO46_RS16395;Name=CCO46_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16395;old_locus_tag=CCO46_16380 NZ_NPOH01000014.1 Protein Homology CDS 5180 7792 . - 0 ID=cds-WP_061372187.1;Parent=gene-CCO46_RS16395;Dbxref=GenBank:WP_061372187.1;Name=WP_061372187.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=CCO46_RS16395;product=fimbrial biogenesis usher protein;protein_id=WP_061372187.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 7823 8515 . - . ID=gene-CCO46_RS16400;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=CCO46_RS16400;old_locus_tag=CCO46_16385 NZ_NPOH01000014.1 Protein Homology CDS 7823 8515 . - 0 ID=cds-WP_001519112.1;Parent=gene-CCO46_RS16400;Dbxref=GenBank:WP_001519112.1;Name=WP_001519112.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=CCO46_RS16400;product=type 1 fimbria chaperone FimC;protein_id=WP_001519112.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 8559 9092 . - . ID=gene-CCO46_RS16405;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=CCO46_RS16405;old_locus_tag=CCO46_16390 NZ_NPOH01000014.1 Protein Homology CDS 8559 9092 . - 0 ID=cds-WP_000619604.1;Parent=gene-CCO46_RS16405;Dbxref=GenBank:WP_000619604.1;Name=WP_000619604.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=CCO46_RS16405;product=type 1 fimbrial protein subunit FimI;protein_id=WP_000619604.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 9167 9724 . - . ID=gene-CCO46_RS16410;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=CCO46_RS16410;old_locus_tag=CCO46_16395 NZ_NPOH01000014.1 Protein Homology CDS 9167 9724 . - 0 ID=cds-WP_000681026.1;Parent=gene-CCO46_RS16410;Dbxref=GenBank:WP_000681026.1;Name=WP_000681026.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=CCO46_RS16410;product=type 1 fimbrial protein subunit FimA;protein_id=WP_000681026.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 10271 11137 . + . ID=gene-CCO46_RS16420;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CCO46_RS16420;old_locus_tag=CCO46_16405 NZ_NPOH01000014.1 Protein Homology CDS 10271 11137 . + 0 ID=cds-WP_000729165.1;Parent=gene-CCO46_RS16420;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=CCO46_RS16420;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 11139 11351 . + . ID=gene-CCO46_RS16425;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=CCO46_RS16425;old_locus_tag=CCO46_16410 NZ_NPOH01000014.1 Protein Homology CDS 11139 11351 . + 0 ID=cds-WP_000190278.1;Parent=gene-CCO46_RS16425;Dbxref=GenBank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=CCO46_RS16425;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 11478 12026 . + . ID=gene-CCO46_RS16430;Name=CCO46_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16430;old_locus_tag=CCO46_16415 NZ_NPOH01000014.1 Protein Homology CDS 11478 12026 . + 0 ID=cds-WP_023254190.1;Parent=gene-CCO46_RS16430;Dbxref=GenBank:WP_023254190.1;Name=WP_023254190.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728132.1;locus_tag=CCO46_RS16430;product=metal-dependent hydrolase;protein_id=WP_023254190.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 12117 13502 . - . ID=gene-CCO46_RS16435;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CCO46_RS16435;old_locus_tag=CCO46_16420 NZ_NPOH01000014.1 Protein Homology CDS 12117 13502 . - 0 ID=cds-WP_000912376.1;Parent=gene-CCO46_RS16435;Dbxref=GenBank:WP_000912376.1;Name=WP_000912376.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=CCO46_RS16435;product=cysteine--tRNA ligase;protein_id=WP_000912376.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 13675 14169 . + . ID=gene-CCO46_RS16440;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=CCO46_RS16440;old_locus_tag=CCO46_16425 NZ_NPOH01000014.1 Protein Homology CDS 13675 14169 . + 0 ID=cds-WP_000255991.1;Parent=gene-CCO46_RS16440;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=CCO46_RS16440;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 14172 14894 . + . ID=gene-CCO46_RS16445;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=CCO46_RS16445;old_locus_tag=CCO46_16430 NZ_NPOH01000014.1 Protein Homology CDS 14172 14894 . + 0 ID=cds-WP_000212287.1;Parent=gene-CCO46_RS16445;Dbxref=GenBank:WP_000212287.1;Name=WP_000212287.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=CCO46_RS16445;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212287.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 15012 15521 . + . ID=gene-CCO46_RS16455;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CCO46_RS16455;old_locus_tag=CCO46_16440 NZ_NPOH01000014.1 Protein Homology CDS 15012 15521 . + 0 ID=cds-WP_000098736.1;Parent=gene-CCO46_RS16455;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=CCO46_RS16455;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 15518 16585 . + . ID=gene-CCO46_RS16460;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CCO46_RS16460;old_locus_tag=CCO46_16445 NZ_NPOH01000014.1 Protein Homology CDS 15518 16585 . + 0 ID=cds-WP_000815599.1;Parent=gene-CCO46_RS16460;Dbxref=GenBank:WP_000815599.1;Name=WP_000815599.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=CCO46_RS16460;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815599.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 16626 17519 . - . ID=gene-CCO46_RS16465;Name=CCO46_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16465;old_locus_tag=CCO46_16450 NZ_NPOH01000014.1 Protein Homology CDS 16626 17519 . - 0 ID=cds-WP_000855337.1;Parent=gene-CCO46_RS16465;Dbxref=GenBank:WP_000855337.1;Name=WP_000855337.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=CCO46_RS16465;product=carbamate kinase;protein_id=WP_000855337.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 17523 18332 . - . ID=gene-CCO46_RS16470;Name=CCO46_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16470;old_locus_tag=CCO46_16455 NZ_NPOH01000014.1 Protein Homology CDS 17523 18332 . - 0 ID=cds-WP_000821191.1;Parent=gene-CCO46_RS16470;Dbxref=GenBank:WP_000821191.1;Name=WP_000821191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=CCO46_RS16470;product=DUF2877 domain-containing protein;protein_id=WP_000821191.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 18344 19603 . - . ID=gene-CCO46_RS16475;Name=CCO46_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16475;old_locus_tag=CCO46_16460 NZ_NPOH01000014.1 Protein Homology CDS 18344 19603 . - 0 ID=cds-WP_000495330.1;Parent=gene-CCO46_RS16475;Dbxref=GenBank:WP_000495330.1;Name=WP_000495330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=CCO46_RS16475;product=DUF1116 domain-containing protein;protein_id=WP_000495330.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 19613 21277 . - . ID=gene-CCO46_RS16480;Name=CCO46_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16480;old_locus_tag=CCO46_16465 NZ_NPOH01000014.1 Protein Homology CDS 19613 21277 . - 0 ID=cds-WP_058331296.1;Parent=gene-CCO46_RS16480;Dbxref=GenBank:WP_058331296.1;Name=WP_058331296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=CCO46_RS16480;product=acyl-CoA synthetase FdrA;protein_id=WP_058331296.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 21593 22642 . + . ID=gene-CCO46_RS16485;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=CCO46_RS16485;old_locus_tag=CCO46_16470 NZ_NPOH01000014.1 Protein Homology CDS 21593 22642 . + 0 ID=cds-WP_000703930.1;Parent=gene-CCO46_RS16485;Dbxref=GenBank:WP_000703930.1;Name=WP_000703930.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=CCO46_RS16485;product=ureidoglycolate dehydrogenase AllD;protein_id=WP_000703930.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 22664 23899 . + . ID=gene-CCO46_RS16490;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=CCO46_RS16490;old_locus_tag=CCO46_16475 NZ_NPOH01000014.1 Protein Homology CDS 22664 23899 . + 0 ID=cds-WP_000589769.1;Parent=gene-CCO46_RS16490;Dbxref=GenBank:WP_000589769.1;Name=WP_000589769.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=CCO46_RS16490;product=allantoate deiminase;protein_id=WP_000589769.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 23910 24695 . + . ID=gene-CCO46_RS16495;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=CCO46_RS16495;old_locus_tag=CCO46_16480 NZ_NPOH01000014.1 Protein Homology CDS 23910 24695 . + 0 ID=cds-WP_000540987.1;Parent=gene-CCO46_RS16495;Dbxref=GenBank:WP_000540987.1;Name=WP_000540987.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=CCO46_RS16495;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540987.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 24775 25923 . - . ID=gene-CCO46_RS16500;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=CCO46_RS16500;old_locus_tag=CCO46_16485 NZ_NPOH01000014.1 Protein Homology CDS 24775 25923 . - 0 ID=cds-WP_058331295.1;Parent=gene-CCO46_RS16500;Dbxref=GenBank:WP_058331295.1;Name=WP_058331295.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=CCO46_RS16500;product=glycerate 3-kinase;protein_id=WP_058331295.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 25946 27244 . - . ID=gene-CCO46_RS16505;Name=CCO46_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16505;old_locus_tag=CCO46_16490 NZ_NPOH01000014.1 Protein Homology CDS 25946 27244 . - 0 ID=cds-WP_000484505.1;Parent=gene-CCO46_RS16505;Dbxref=GenBank:WP_000484505.1;Name=WP_000484505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=CCO46_RS16505;product=uracil/xanthine transporter;protein_id=WP_000484505.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 27303 28664 . - . ID=gene-CCO46_RS16510;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=CCO46_RS16510;old_locus_tag=CCO46_16495 NZ_NPOH01000014.1 Protein Homology CDS 27303 28664 . - 0 ID=cds-WP_000006865.1;Parent=gene-CCO46_RS16510;Dbxref=GenBank:WP_000006865.1;Name=WP_000006865.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=CCO46_RS16510;product=allantoinase AllB;protein_id=WP_000006865.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 28743 30197 . - . ID=gene-CCO46_RS16515;Name=CCO46_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16515;old_locus_tag=CCO46_16500 NZ_NPOH01000014.1 Protein Homology CDS 28743 30197 . - 0 ID=cds-WP_000401064.1;Parent=gene-CCO46_RS16515;Dbxref=GenBank:WP_000401064.1;Name=WP_000401064.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=CCO46_RS16515;product=allantoin transporter;protein_id=WP_000401064.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 30293 31540 . - . ID=gene-CCO46_RS16520;Name=CCO46_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16520;old_locus_tag=CCO46_16505 NZ_NPOH01000014.1 Protein Homology CDS 30293 31540 . - 0 ID=cds-WP_000005070.1;Parent=gene-CCO46_RS16520;Dbxref=GenBank:WP_000005070.1;Name=WP_000005070.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=CCO46_RS16520;product=MFS transporter;protein_id=WP_000005070.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 31606 32484 . - . ID=gene-CCO46_RS16525;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=CCO46_RS16525;old_locus_tag=CCO46_16510 NZ_NPOH01000014.1 Protein Homology CDS 31606 32484 . - 0 ID=cds-WP_023201982.1;Parent=gene-CCO46_RS16525;Dbxref=GenBank:WP_023201982.1;Name=WP_023201982.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=CCO46_RS16525;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_023201982.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 32585 33361 . - . ID=gene-CCO46_RS16530;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=CCO46_RS16530;old_locus_tag=CCO46_16515 NZ_NPOH01000014.1 Protein Homology CDS 32585 33361 . - 0 ID=cds-WP_058331293.1;Parent=gene-CCO46_RS16530;Dbxref=GenBank:WP_058331293.1;Name=WP_058331293.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=CCO46_RS16530;product=hydroxypyruvate isomerase Gip;protein_id=WP_058331293.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 33374 35155 . - . ID=gene-CCO46_RS16535;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=CCO46_RS16535;old_locus_tag=CCO46_16520 NZ_NPOH01000014.1 Protein Homology CDS 33374 35155 . - 0 ID=cds-WP_001096868.1;Parent=gene-CCO46_RS16535;Dbxref=GenBank:WP_001096868.1;Name=WP_001096868.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=CCO46_RS16535;product=glyoxylate carboligase;protein_id=WP_001096868.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 35240 36058 . - . ID=gene-CCO46_RS16540;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=CCO46_RS16540;old_locus_tag=CCO46_16525 NZ_NPOH01000014.1 Protein Homology CDS 35240 36058 . - 0 ID=cds-WP_000141265.1;Parent=gene-CCO46_RS16540;Dbxref=GenBank:WP_000141265.1;Name=WP_000141265.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=CCO46_RS16540;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141265.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 36137 36619 . - . ID=gene-CCO46_RS16545;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=CCO46_RS16545;old_locus_tag=CCO46_16530 NZ_NPOH01000014.1 Protein Homology CDS 36137 36619 . - 0 ID=cds-WP_000764659.1;Parent=gene-CCO46_RS16545;Dbxref=GenBank:WP_000764659.1;Name=WP_000764659.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=CCO46_RS16545;product=ureidoglycolate lyase;protein_id=WP_000764659.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 36846 37772 . + . ID=gene-CCO46_RS16550;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=CCO46_RS16550;old_locus_tag=CCO46_16535 NZ_NPOH01000014.1 Protein Homology CDS 36846 37772 . + 0 ID=cds-WP_000460169.1;Parent=gene-CCO46_RS16550;Dbxref=GenBank:WP_000460169.1;Name=WP_000460169.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=CCO46_RS16550;product=HTH-type transcriptional activator AllS;protein_id=WP_000460169.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 37842 38936 . + . ID=gene-CCO46_RS16555;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=CCO46_RS16555;old_locus_tag=CCO46_16540 NZ_NPOH01000014.1 Protein Homology CDS 37842 38936 . + 0 ID=cds-WP_001154067.1;Parent=gene-CCO46_RS16555;Dbxref=GenBank:WP_001154067.1;Name=WP_001154067.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=CCO46_RS16555;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001154067.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 38975 39634 . - . ID=gene-CCO46_RS16560;Name=CCO46_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16560;old_locus_tag=CCO46_16545 NZ_NPOH01000014.1 Protein Homology CDS 38975 39634 . - 0 ID=cds-WP_000342247.1;Parent=gene-CCO46_RS16560;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=CCO46_RS16560;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 39627 40643 . - . ID=gene-CCO46_RS16565;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=CCO46_RS16565;old_locus_tag=CCO46_16550 NZ_NPOH01000014.1 Protein Homology CDS 39627 40643 . - 0 ID=cds-WP_000569660.1;Parent=gene-CCO46_RS16565;Dbxref=GenBank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=CCO46_RS16565;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 40680 41510 . - . ID=gene-CCO46_RS16570;Name=CCO46_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16570;old_locus_tag=CCO46_16555 NZ_NPOH01000014.1 Protein Homology CDS 40680 41510 . - 0 ID=cds-WP_000524317.1;Parent=gene-CCO46_RS16570;Dbxref=GenBank:WP_000524317.1;Name=WP_000524317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=CCO46_RS16570;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000524317.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 41767 42900 . - . ID=gene-CCO46_RS16575;Name=CCO46_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16575;old_locus_tag=CCO46_16560 NZ_NPOH01000014.1 Protein Homology CDS 41767 42900 . - 0 ID=cds-WP_000152862.1;Parent=gene-CCO46_RS16575;Dbxref=GenBank:WP_000152862.1;Name=WP_000152862.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=CCO46_RS16575;product=porin;protein_id=WP_000152862.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 43086 45500 . - . ID=gene-CCO46_RS16580;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=CCO46_RS16580;old_locus_tag=CCO46_16565 NZ_NPOH01000014.1 Protein Homology CDS 43086 45500 . - 0 ID=cds-WP_097363406.1;Parent=gene-CCO46_RS16580;Dbxref=GenBank:WP_097363406.1;Name=WP_097363406.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=CCO46_RS16580;product=putative ABC transporter permease subunit YbbP;protein_id=WP_097363406.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 45497 46183 . - . ID=gene-CCO46_RS16585;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=CCO46_RS16585;old_locus_tag=CCO46_16570 NZ_NPOH01000014.1 Protein Homology CDS 45497 46183 . - 0 ID=cds-WP_001110598.1;Parent=gene-CCO46_RS16585;Dbxref=GenBank:WP_001110598.1;Name=WP_001110598.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=CCO46_RS16585;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110598.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 46154 46768 . + . ID=gene-CCO46_RS16590;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=CCO46_RS16590;old_locus_tag=CCO46_16575 NZ_NPOH01000014.1 Protein Homology CDS 46154 46768 . + 0 ID=cds-WP_020898489.1;Parent=gene-CCO46_RS16590;Dbxref=GenBank:WP_020898489.1;Name=WP_020898489.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=CCO46_RS16590;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_020898489.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 46923 47693 . + . ID=gene-CCO46_RS16595;Name=CCO46_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16595;old_locus_tag=CCO46_16580 NZ_NPOH01000014.1 Protein Homology CDS 46923 47693 . + 0 ID=cds-WP_023182324.1;Parent=gene-CCO46_RS16595;Dbxref=GenBank:WP_023182324.1;Name=WP_023182324.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=CCO46_RS16595;product=SDR family oxidoreductase;protein_id=WP_023182324.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 47753 48607 . + . ID=gene-CCO46_RS16600;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=CCO46_RS16600;old_locus_tag=CCO46_16585 NZ_NPOH01000014.1 Protein Homology CDS 47753 48607 . + 0 ID=cds-WP_000116061.1;Parent=gene-CCO46_RS16600;Dbxref=GenBank:WP_000116061.1;Name=WP_000116061.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=CCO46_RS16600;product=chaperedoxin;protein_id=WP_000116061.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 48693 49472 . - . ID=gene-CCO46_RS16605;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=CCO46_RS16605;old_locus_tag=CCO46_16590 NZ_NPOH01000014.1 Protein Homology CDS 48693 49472 . - 0 ID=cds-WP_097363407.1;Parent=gene-CCO46_RS16605;Dbxref=GenBank:WP_097363407.1;Name=WP_097363407.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=CCO46_RS16605;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_097363407.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 49459 50136 . - . ID=gene-CCO46_RS16610;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=CCO46_RS16610;old_locus_tag=CCO46_16595 NZ_NPOH01000014.1 Protein Homology CDS 49459 50136 . - 0 ID=cds-WP_000140192.1;Parent=gene-CCO46_RS16610;Dbxref=GenBank:WP_000140192.1;Name=WP_000140192.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=CCO46_RS16610;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_000140192.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 50283 51200 . + . ID=gene-CCO46_RS16615;Name=CCO46_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16615;old_locus_tag=CCO46_16600 NZ_NPOH01000014.1 Protein Homology CDS 50283 51200 . + 0 ID=cds-WP_000906146.1;Parent=gene-CCO46_RS16615;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=CCO46_RS16615;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 51197 51649 . + . ID=gene-CCO46_RS16620;Name=CCO46_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16620;old_locus_tag=CCO46_16605 NZ_NPOH01000014.1 Protein Homology CDS 51197 51649 . + 0 ID=cds-WP_000561177.1;Parent=gene-CCO46_RS16620;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=CCO46_RS16620;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 51650 52066 . - . ID=gene-CCO46_RS16625;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=CCO46_RS16625;old_locus_tag=CCO46_16610 NZ_NPOH01000014.1 Protein Homology CDS 51650 52066 . - 0 ID=cds-WP_001026760.1;Parent=gene-CCO46_RS16625;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=CCO46_RS16625;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 52176 54677 . + . ID=gene-CCO46_RS16630;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=CCO46_RS16630;old_locus_tag=CCO46_16615 NZ_NPOH01000014.1 Protein Homology CDS 52176 54677 . + 0 ID=cds-WP_000083910.1;Parent=gene-CCO46_RS16630;Dbxref=GenBank:WP_000083910.1;Name=WP_000083910.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=CCO46_RS16630;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083910.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 54832 55659 . + . ID=gene-CCO46_RS16635;Name=CCO46_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16635;old_locus_tag=CCO46_16620 NZ_NPOH01000014.1 Protein Homology CDS 54832 55659 . + 0 ID=cds-WP_097363408.1;Parent=gene-CCO46_RS16635;Dbxref=GenBank:WP_097363408.1;Name=WP_097363408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=CCO46_RS16635;product=lysozyme inhibitor LprI family protein;protein_id=WP_097363408.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 55745 56539 . + . ID=gene-CCO46_RS16640;Name=CCO46_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16640;old_locus_tag=CCO46_16625 NZ_NPOH01000014.1 Protein Homology CDS 55745 56539 . + 0 ID=cds-WP_000421861.1;Parent=gene-CCO46_RS16640;Dbxref=GenBank:WP_000421861.1;Name=WP_000421861.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=CCO46_RS16640;product=TraB/GumN family protein;protein_id=WP_000421861.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 56741 57220 . + . ID=gene-CCO46_RS16645;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CCO46_RS16645;old_locus_tag=CCO46_16630 NZ_NPOH01000014.1 Protein Homology CDS 56741 57220 . + 0 ID=cds-WP_000186618.1;Parent=gene-CCO46_RS16645;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=CCO46_RS16645;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 57337 58989 . - . ID=gene-CCO46_RS16650;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=CCO46_RS16650;old_locus_tag=CCO46_16635 NZ_NPOH01000014.1 Protein Homology CDS 57337 58989 . - 0 ID=cds-WP_000670398.1;Parent=gene-CCO46_RS16650;Dbxref=GenBank:WP_000670398.1;Name=WP_000670398.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=CCO46_RS16650;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670398.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 59162 60382 . + . ID=gene-CCO46_RS16655;Name=CCO46_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16655;old_locus_tag=CCO46_16640 NZ_NPOH01000014.1 Protein Homology CDS 59162 60382 . + 0 ID=cds-WP_001251593.1;Parent=gene-CCO46_RS16655;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=CCO46_RS16655;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 60597 62273 . + . ID=gene-CCO46_RS16660;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=CCO46_RS16660;old_locus_tag=CCO46_16645 NZ_NPOH01000014.1 Protein Homology CDS 60597 62273 . + 0 ID=cds-WP_000546202.1;Parent=gene-CCO46_RS16660;Dbxref=GenBank:WP_000546202.1;Name=WP_000546202.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=CCO46_RS16660;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546202.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 62322 63626 . - . ID=gene-CCO46_RS16665;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=CCO46_RS16665;old_locus_tag=CCO46_16650 NZ_NPOH01000014.1 Protein Homology CDS 62322 63626 . - 0 ID=cds-WP_000671592.1;Parent=gene-CCO46_RS16665;Dbxref=GenBank:WP_000671592.1;Name=WP_000671592.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=CCO46_RS16665;product=inosine/guanosine kinase;protein_id=WP_000671592.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 63779 64750 . + . ID=gene-CCO46_RS16670;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=CCO46_RS16670;old_locus_tag=CCO46_16655 NZ_NPOH01000014.1 Protein Homology CDS 63779 64750 . + 0 ID=cds-WP_001748996.1;Parent=gene-CCO46_RS16670;Dbxref=GenBank:WP_001748996.1;Name=WP_001748996.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=CCO46_RS16670;product=acetyl esterase;protein_id=WP_001748996.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 64747 65709 . - . ID=gene-CCO46_RS16675;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CCO46_RS16675;old_locus_tag=CCO46_16660 NZ_NPOH01000014.1 Protein Homology CDS 64747 65709 . - 0 ID=cds-WP_001250078.1;Parent=gene-CCO46_RS16675;Dbxref=GenBank:WP_001250078.1;Name=WP_001250078.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=CCO46_RS16675;product=ferrochelatase;protein_id=WP_001250078.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 65938 66582 . - . ID=gene-CCO46_RS16680;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=CCO46_RS16680;old_locus_tag=CCO46_16665 NZ_NPOH01000014.1 Protein Homology CDS 65938 66582 . - 0 ID=cds-WP_001220237.1;Parent=gene-CCO46_RS16680;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=CCO46_RS16680;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 67114 68988 . - . ID=gene-CCO46_RS16690;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=CCO46_RS16690;old_locus_tag=CCO46_16675 NZ_NPOH01000014.1 Protein Homology CDS 67114 68988 . - 0 ID=cds-WP_001523272.1;Parent=gene-CCO46_RS16690;Dbxref=GenBank:WP_001523272.1;Name=WP_001523272.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=CCO46_RS16690;product=molecular chaperone HtpG;protein_id=WP_001523272.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 69099 69704 . - . ID=gene-CCO46_RS16695;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CCO46_RS16695;old_locus_tag=CCO46_16680 NZ_NPOH01000014.1 Protein Homology CDS 69099 69704 . - 0 ID=cds-WP_001195023.1;Parent=gene-CCO46_RS16695;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=CCO46_RS16695;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 69704 70033 . - . ID=gene-CCO46_RS16700;Name=CCO46_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16700;old_locus_tag=CCO46_16685 NZ_NPOH01000014.1 Protein Homology CDS 69704 70033 . - 0 ID=cds-WP_000467098.1;Parent=gene-CCO46_RS16700;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=CCO46_RS16700;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 70079 72007 . - . ID=gene-CCO46_RS16705;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CCO46_RS16705;old_locus_tag=CCO46_16690 NZ_NPOH01000014.1 Protein Homology CDS 70079 72007 . - 0 ID=cds-WP_000121967.1;Parent=gene-CCO46_RS16705;Dbxref=GenBank:WP_000121967.1;Name=WP_000121967.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=CCO46_RS16705;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121967.1;transl_table=11 NZ_NPOH01000014.1 cmsearch sequence_feature 70682 70746 . - . ID=id-CCO46_RS16705;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS16705 NZ_NPOH01000014.1 RefSeq gene 72121 72672 . - . ID=gene-CCO46_RS16710;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=CCO46_RS16710;old_locus_tag=CCO46_16695 NZ_NPOH01000014.1 Protein Homology CDS 72121 72672 . - 0 ID=cds-WP_000127350.1;Parent=gene-CCO46_RS16710;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=CCO46_RS16710;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 72825 73202 . - . ID=gene-CCO46_RS16720;Name=CCO46_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16720;old_locus_tag=CCO46_16705 NZ_NPOH01000014.1 Protein Homology CDS 72825 73202 . - 0 ID=cds-WP_001189858.1;Parent=gene-CCO46_RS16720;Dbxref=GenBank:WP_001189858.1;Name=WP_001189858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=CCO46_RS16720;product=DUF454 family protein;protein_id=WP_001189858.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 73271 73798 . + . ID=gene-CCO46_RS16725;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=CCO46_RS16725;old_locus_tag=CCO46_16710 NZ_NPOH01000014.1 Protein Homology CDS 73271 73798 . + 0 ID=cds-WP_001519637.1;Parent=gene-CCO46_RS16725;Dbxref=GenBank:WP_001519637.1;Name=WP_001519637.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=CCO46_RS16725;product=primosomal replication protein N'';protein_id=WP_001519637.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 73812 73979 . + . ID=gene-CCO46_RS16730;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=CCO46_RS16730;old_locus_tag=CCO46_16715 NZ_NPOH01000014.1 Protein Homology CDS 73812 73979 . + 0 ID=cds-WP_000051161.1;Parent=gene-CCO46_RS16730;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=CCO46_RS16730;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 74049 74984 . + . ID=gene-CCO46_RS16735;Name=CCO46_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16735;old_locus_tag=CCO46_16720 NZ_NPOH01000014.1 Protein Homology CDS 74049 74984 . + 0 ID=cds-WP_097363409.1;Parent=gene-CCO46_RS16735;Dbxref=GenBank:WP_097363409.1;Name=WP_097363409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=CCO46_RS16735;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_097363409.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 75026 78388 . - . ID=gene-CCO46_RS16740;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=CCO46_RS16740;old_locus_tag=CCO46_16725 NZ_NPOH01000014.1 Protein Homology CDS 75026 78388 . - 0 ID=cds-WP_097363410.1;Parent=gene-CCO46_RS16740;Dbxref=GenBank:WP_097363410.1;Name=WP_097363410.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=CCO46_RS16740;product=mechanosensitive channel MscK;protein_id=WP_097363410.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 78507 79160 . - . ID=gene-CCO46_RS16745;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=CCO46_RS16745;old_locus_tag=CCO46_16730 NZ_NPOH01000014.1 Protein Homology CDS 78507 79160 . - 0 ID=cds-WP_000101753.1;Parent=gene-CCO46_RS16745;Dbxref=GenBank:WP_000101753.1;Name=WP_000101753.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=CCO46_RS16745;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101753.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 79302 80495 . + . ID=gene-CCO46_RS16750;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=CCO46_RS16750;old_locus_tag=CCO46_16735 NZ_NPOH01000014.1 Protein Homology CDS 79302 80495 . + 0 ID=cds-WP_001039199.1;Parent=gene-CCO46_RS16750;Dbxref=GenBank:WP_001039199.1;Name=WP_001039199.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=CCO46_RS16750;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039199.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 80518 83667 . + . ID=gene-CCO46_RS16755;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=CCO46_RS16755;old_locus_tag=CCO46_16740 NZ_NPOH01000014.1 Protein Homology CDS 80518 83667 . + 0 ID=cds-WP_001132508.1;Parent=gene-CCO46_RS16755;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=CCO46_RS16755;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 84163 84537 . + . ID=gene-CCO46_RS16760;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=CCO46_RS16760;old_locus_tag=CCO46_16745 NZ_NPOH01000014.1 Protein Homology CDS 84163 84537 . + 0 ID=cds-WP_000344807.1;Parent=gene-CCO46_RS16760;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=CCO46_RS16760;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 84565 84783 . + . ID=gene-CCO46_RS16765;Name=CCO46_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16765;old_locus_tag=CCO46_16750 NZ_NPOH01000014.1 Protein Homology CDS 84565 84783 . + 0 ID=cds-WP_001280991.1;Parent=gene-CCO46_RS16765;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=CCO46_RS16765;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 84962 85513 . + . ID=gene-CCO46_RS16770;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=CCO46_RS16770;old_locus_tag=CCO46_16755 NZ_NPOH01000014.1 Protein Homology CDS 84962 85513 . + 0 ID=cds-WP_080160061.1;Parent=gene-CCO46_RS16770;Dbxref=GenBank:WP_080160061.1;Name=WP_080160061.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=CCO46_RS16770;product=maltose O-acetyltransferase;protein_id=WP_080160061.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 85631 86101 . + . ID=gene-CCO46_RS16775;Name=CCO46_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16775;old_locus_tag=CCO46_16760 NZ_NPOH01000014.1 Protein Homology CDS 85631 86101 . + 0 ID=cds-WP_000136183.1;Parent=gene-CCO46_RS16775;Dbxref=GenBank:WP_000136183.1;Name=WP_000136183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=CCO46_RS16775;product=YlaC family protein;protein_id=WP_000136183.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 86158 86298 . - . ID=gene-CCO46_RS16780;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=CCO46_RS16780;old_locus_tag=CCO46_16765 NZ_NPOH01000014.1 Protein Homology CDS 86158 86298 . - 0 ID=cds-WP_001197749.1;Parent=gene-CCO46_RS16780;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=CCO46_RS16780;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 86300 86563 . - . ID=gene-CCO46_RS16785;Name=CCO46_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16785;old_locus_tag=CCO46_16770 NZ_NPOH01000014.1 Protein Homology CDS 86300 86563 . - 0 ID=cds-WP_000801416.1;Parent=gene-CCO46_RS16785;Dbxref=GenBank:WP_000801416.1;Name=WP_000801416.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801422.1;locus_tag=CCO46_RS16785;product=type B 50S ribosomal protein L31;protein_id=WP_000801416.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 86788 88338 . + . ID=gene-CCO46_RS16790;Name=CCO46_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16790;old_locus_tag=CCO46_16775 NZ_NPOH01000014.1 Protein Homology CDS 86788 88338 . + 0 ID=cds-WP_097363411.1;Parent=gene-CCO46_RS16790;Dbxref=GenBank:WP_097363411.1;Name=WP_097363411.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=CCO46_RS16790;product=EAL domain-containing protein;protein_id=WP_097363411.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 88388 88484 . - . ID=gene-CCO46_RS16795;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CCO46_RS16795;old_locus_tag=CCO46_16780 NZ_NPOH01000014.1 cmsearch SRP_RNA 88388 88484 . - . ID=rna-CCO46_RS16795;Parent=gene-CCO46_RS16795;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS16795;product=signal recognition particle sRNA small type NZ_NPOH01000014.1 cmsearch exon 88388 88484 . - . ID=exon-CCO46_RS16795-1;Parent=rna-CCO46_RS16795;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS16795;product=signal recognition particle sRNA small type NZ_NPOH01000014.1 RefSeq gene 88569 88958 . + . ID=gene-CCO46_RS16800;Name=CCO46_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16800;old_locus_tag=CCO46_16785 NZ_NPOH01000014.1 Protein Homology CDS 88569 88958 . + 0 ID=cds-WP_000961285.1;Parent=gene-CCO46_RS16800;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=CCO46_RS16800;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 88991 89560 . - . ID=gene-CCO46_RS16805;Name=CCO46_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16805;old_locus_tag=CCO46_16790 NZ_NPOH01000014.1 Protein Homology CDS 88991 89560 . - 0 ID=cds-WP_000779802.1;Parent=gene-CCO46_RS16805;Dbxref=GenBank:WP_000779802.1;Name=WP_000779802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=CCO46_RS16805;product=YbaY family lipoprotein;protein_id=WP_000779802.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 89775 90635 . + . ID=gene-CCO46_RS16810;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=CCO46_RS16810;old_locus_tag=CCO46_16795 NZ_NPOH01000014.1 Protein Homology CDS 89775 90635 . + 0 ID=cds-WP_000084176.1;Parent=gene-CCO46_RS16810;Dbxref=GenBank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=CCO46_RS16810;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 90735 92021 . - . ID=gene-CCO46_RS16815;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=CCO46_RS16815;old_locus_tag=CCO46_16800 NZ_NPOH01000014.1 Protein Homology CDS 90735 92021 . - 0 ID=cds-WP_000684917.1;Parent=gene-CCO46_RS16815;Dbxref=GenBank:WP_000684917.1;Name=WP_000684917.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=CCO46_RS16815;product=ammonium transporter AmtB;protein_id=WP_000684917.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 92053 92391 . - . ID=gene-CCO46_RS16820;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=CCO46_RS16820;old_locus_tag=CCO46_16805 NZ_NPOH01000014.1 Protein Homology CDS 92053 92391 . - 0 ID=cds-WP_000780341.1;Parent=gene-CCO46_RS16820;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=CCO46_RS16820;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 92604 94385 . - . ID=gene-CCO46_RS16825;Name=CCO46_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16825;old_locus_tag=CCO46_16810 NZ_NPOH01000014.1 Protein Homology CDS 92604 94385 . - 0 ID=cds-WP_001256070.1;Parent=gene-CCO46_RS16825;Dbxref=GenBank:WP_001256070.1;Name=WP_001256070.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=CCO46_RS16825;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256070.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 94378 96150 . - . ID=gene-CCO46_RS16830;Name=CCO46_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16830;old_locus_tag=CCO46_16815 NZ_NPOH01000014.1 Protein Homology CDS 94378 96150 . - 0 ID=cds-WP_097363412.1;Parent=gene-CCO46_RS16830;Dbxref=GenBank:WP_097363412.1;Name=WP_097363412.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=CCO46_RS16830;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_097363412.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 96191 96649 . - . ID=gene-CCO46_RS16835;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=CCO46_RS16835;old_locus_tag=CCO46_16820 NZ_NPOH01000014.1 Protein Homology CDS 96191 96649 . - 0 ID=cds-WP_000884593.1;Parent=gene-CCO46_RS16835;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=CCO46_RS16835;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 96762 97817 . + . ID=gene-CCO46_RS16840;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=CCO46_RS16840;old_locus_tag=CCO46_16825 NZ_NPOH01000014.1 Protein Homology CDS 96762 97817 . + 0 ID=cds-WP_000987850.1;Parent=gene-CCO46_RS16840;Dbxref=GenBank:WP_000987850.1;Name=WP_000987850.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=CCO46_RS16840;product=cysteine desulfhydrase;protein_id=WP_000987850.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 97867 98685 . - . ID=gene-CCO46_RS16845;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=CCO46_RS16845;old_locus_tag=CCO46_16830 NZ_NPOH01000014.1 Protein Homology CDS 97867 98685 . - 0 ID=cds-WP_000113030.1;Parent=gene-CCO46_RS16845;Dbxref=GenBank:WP_000113030.1;Name=WP_000113030.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=CCO46_RS16845;product=HMP-PP phosphatase;protein_id=WP_000113030.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 98786 100486 . + . ID=gene-CCO46_RS16850;Name=CCO46_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16850;old_locus_tag=CCO46_16835 NZ_NPOH01000014.1 Protein Homology CDS 98786 100486 . + 0 ID=cds-WP_001238162.1;Parent=gene-CCO46_RS16850;Dbxref=GenBank:WP_001238162.1;Name=WP_001238162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=CCO46_RS16850;product=SgrR family transcriptional regulator;protein_id=WP_001238162.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 100551 101246 . + . ID=gene-CCO46_RS16855;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CCO46_RS16855;old_locus_tag=CCO46_16840 NZ_NPOH01000014.1 Protein Homology CDS 100551 101246 . + 0 ID=cds-WP_000817202.1;Parent=gene-CCO46_RS16855;Dbxref=GenBank:WP_000817202.1;Name=WP_000817202.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=CCO46_RS16855;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817202.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 101352 101750 . - . ID=gene-CCO46_RS16860;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=CCO46_RS16860;old_locus_tag=CCO46_16845 NZ_NPOH01000014.1 Protein Homology CDS 101352 101750 . - 0 ID=cds-WP_001194543.1;Parent=gene-CCO46_RS16860;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=CCO46_RS16860;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 101854 102228 . - . ID=gene-CCO46_RS16865;Name=CCO46_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16865;old_locus_tag=CCO46_16850 NZ_NPOH01000014.1 Protein Homology CDS 101854 102228 . - 0 ID=cds-WP_000680325.1;Parent=gene-CCO46_RS16865;Dbxref=GenBank:WP_000680325.1;Name=WP_000680325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=CCO46_RS16865;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680325.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 102378 104249 . - . ID=gene-CCO46_RS16870;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=CCO46_RS16870;old_locus_tag=CCO46_16855 NZ_NPOH01000014.1 Protein Homology CDS 102378 104249 . - 0 ID=cds-WP_000969434.1;Parent=gene-CCO46_RS16870;Dbxref=GenBank:WP_000969434.1;Name=WP_000969434.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=CCO46_RS16870;product=peptidylprolyl isomerase;protein_id=WP_000969434.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 104540 104830 . - . ID=gene-CCO46_RS16875;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=CCO46_RS16875;old_locus_tag=CCO46_16860 NZ_NPOH01000014.1 Protein Homology CDS 104540 104830 . - 0 ID=cds-WP_254888479.1;Parent=gene-CCO46_RS16875;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=CCO46_RS16875;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 105021 107375 . - . ID=gene-CCO46_RS16880;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=CCO46_RS16880;old_locus_tag=CCO46_16865 NZ_NPOH01000014.1 Protein Homology CDS 105021 107375 . - 0 ID=cds-WP_001067723.1;Parent=gene-CCO46_RS16880;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=CCO46_RS16880;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 107561 108832 . - . ID=gene-CCO46_RS16885;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CCO46_RS16885;old_locus_tag=CCO46_16870 NZ_NPOH01000014.1 Protein Homology CDS 107561 108832 . - 0 ID=cds-WP_000130314.1;Parent=gene-CCO46_RS16885;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=CCO46_RS16885;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 109084 109707 . - . ID=gene-CCO46_RS16890;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CCO46_RS16890;old_locus_tag=CCO46_16875 NZ_NPOH01000014.1 Protein Homology CDS 109084 109707 . - 0 ID=cds-WP_000122257.1;Parent=gene-CCO46_RS16890;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=CCO46_RS16890;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 109954 111252 . - . ID=gene-CCO46_RS16895;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CCO46_RS16895;old_locus_tag=CCO46_16880 NZ_NPOH01000014.1 Protein Homology CDS 109954 111252 . - 0 ID=cds-WP_001198403.1;Parent=gene-CCO46_RS16895;Dbxref=GenBank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=CCO46_RS16895;product=trigger factor;protein_id=WP_001198403.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 111599 111916 . - . ID=gene-CCO46_RS16905;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=CCO46_RS16905;old_locus_tag=CCO46_16890 NZ_NPOH01000014.1 Protein Homology CDS 111599 111916 . - 0 ID=cds-WP_000973433.1;Parent=gene-CCO46_RS16905;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=CCO46_RS16905;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 112220 112798 . + . ID=gene-CCO46_RS16915;Name=CCO46_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16915;old_locus_tag=CCO46_16900 NZ_NPOH01000014.1 Protein Homology CDS 112220 112798 . + 0 ID=cds-WP_001537832.1;Parent=gene-CCO46_RS16915;Dbxref=GenBank:WP_001537832.1;Name=WP_001537832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=CCO46_RS16915;product=lipoprotein;protein_id=WP_001537832.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 112842 114317 . + . ID=gene-CCO46_RS16920;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=CCO46_RS16920;old_locus_tag=CCO46_16905 NZ_NPOH01000014.1 Protein Homology CDS 112842 114317 . + 0 ID=cds-WP_058331283.1;Parent=gene-CCO46_RS16920;Dbxref=GenBank:WP_058331283.1;Name=WP_058331283.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=CCO46_RS16920;product=muropeptide MFS transporter AmpG;protein_id=WP_058331283.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 114770 115726 . + . ID=gene-CCO46_RS16925;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=CCO46_RS16925;old_locus_tag=CCO46_16910 NZ_NPOH01000014.1 Protein Homology CDS 114770 115726 . + 0 ID=cds-WP_001239449.1;Parent=gene-CCO46_RS16925;Dbxref=GenBank:WP_001239449.1;Name=WP_001239449.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=CCO46_RS16925;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239449.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 115737 117728 . + . ID=gene-CCO46_RS16930;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=CCO46_RS16930;old_locus_tag=CCO46_16915 NZ_NPOH01000014.1 Protein Homology CDS 115737 117728 . + 0 ID=cds-WP_000467158.1;Parent=gene-CCO46_RS16930;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=CCO46_RS16930;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 117718 118332 . + . ID=gene-CCO46_RS16935;Name=CCO46_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16935;old_locus_tag=CCO46_16920 NZ_NPOH01000014.1 Protein Homology CDS 117718 118332 . + 0 ID=cds-WP_000179833.1;Parent=gene-CCO46_RS16935;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=CCO46_RS16935;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 118332 118661 . + . ID=gene-CCO46_RS16940;Name=CCO46_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16940;old_locus_tag=CCO46_16925 NZ_NPOH01000014.1 Protein Homology CDS 118332 118661 . + 0 ID=cds-WP_000019878.1;Parent=gene-CCO46_RS16940;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=CCO46_RS16940;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 118673 119563 . + . ID=gene-CCO46_RS16945;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CCO46_RS16945;old_locus_tag=CCO46_16930 NZ_NPOH01000014.1 Protein Homology CDS 118673 119563 . + 0 ID=cds-WP_000971352.1;Parent=gene-CCO46_RS16945;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=CCO46_RS16945;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 119611 121080 . - . ID=gene-CCO46_RS16950;Name=CCO46_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16950;old_locus_tag=CCO46_16935 NZ_NPOH01000014.1 Protein Homology CDS 119611 121080 . - 0 ID=cds-WP_000595921.1;Parent=gene-CCO46_RS16950;Dbxref=GenBank:WP_000595921.1;Name=WP_000595921.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524005.1;locus_tag=CCO46_RS16950;product=SEL1-like repeat protein;protein_id=WP_000595921.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 121092 122603 . - . ID=gene-CCO46_RS16955;Name=CCO46_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16955;old_locus_tag=CCO46_16940 NZ_NPOH01000014.1 Protein Homology CDS 121092 122603 . - 0 ID=cds-WP_080160060.1;Parent=gene-CCO46_RS16955;Dbxref=GenBank:WP_080160060.1;Name=WP_080160060.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=CCO46_RS16955;product=SEL1-like repeat protein;protein_id=WP_080160060.1;transl_table=11 NZ_NPOH01000014.1 RefSeq pseudogene 122778 122909 . + . ID=gene-CCO46_RS25540;Name=CCO46_RS25540;end_range=122909,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25540;partial=true;pseudo=true NZ_NPOH01000014.1 Protein Homology CDS 122778 122909 . + 0 ID=cds-CCO46_RS25540;Parent=gene-CCO46_RS25540;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=122909,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1;locus_tag=CCO46_RS25540;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 123140 124504 . + . ID=gene-CCO46_RS16965;Name=CCO46_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16965;old_locus_tag=CCO46_16950 NZ_NPOH01000014.1 Protein Homology CDS 123140 124504 . + 0 ID=cds-WP_023218109.1;Parent=gene-CCO46_RS16965;Dbxref=GenBank:WP_023218109.1;Name=WP_023218109.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=CCO46_RS16965;product=MFS transporter;protein_id=WP_023218109.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 124551 125042 . - . ID=gene-CCO46_RS16970;Name=CCO46_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16970;old_locus_tag=CCO46_16955 NZ_NPOH01000014.1 Protein Homology CDS 124551 125042 . - 0 ID=cds-WP_001138913.1;Parent=gene-CCO46_RS16970;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=CCO46_RS16970;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 125168 126079 . + . ID=gene-CCO46_RS16975;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=CCO46_RS16975;old_locus_tag=CCO46_16960 NZ_NPOH01000014.1 Protein Homology CDS 125168 126079 . + 0 ID=cds-WP_000705816.1;Parent=gene-CCO46_RS16975;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=CCO46_RS16975;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 126042 126632 . + . ID=gene-CCO46_RS16980;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=CCO46_RS16980;old_locus_tag=CCO46_16965 NZ_NPOH01000014.1 Protein Homology CDS 126042 126632 . + 0 ID=cds-WP_001275803.1;Parent=gene-CCO46_RS16980;Dbxref=GenBank:WP_001275803.1;Name=WP_001275803.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=CCO46_RS16980;product=protein deglycase YajL;protein_id=WP_001275803.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 126742 127530 . - . ID=gene-CCO46_RS16985;Name=CCO46_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16985;old_locus_tag=CCO46_16970 NZ_NPOH01000014.1 Protein Homology CDS 126742 127530 . - 0 ID=cds-WP_000401424.1;Parent=gene-CCO46_RS16985;Dbxref=GenBank:WP_000401424.1;Name=WP_000401424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000401424.1;locus_tag=CCO46_RS16985;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000401424.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 127541 128089 . - . ID=gene-CCO46_RS16990;Name=CCO46_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16990;old_locus_tag=CCO46_16975 NZ_NPOH01000014.1 Protein Homology CDS 127541 128089 . - 0 ID=cds-WP_001533962.1;Parent=gene-CCO46_RS16990;Dbxref=GenBank:WP_001533962.1;Name=WP_001533962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533962.1;locus_tag=CCO46_RS16990;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001533962.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 128092 130425 . - . ID=gene-CCO46_RS16995;Name=CCO46_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS16995;old_locus_tag=CCO46_16980 NZ_NPOH01000014.1 Protein Homology CDS 128092 130425 . - 0 ID=cds-WP_000387839.1;Parent=gene-CCO46_RS16995;Dbxref=GenBank:WP_000387839.1;Name=WP_000387839.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387839.1;locus_tag=CCO46_RS16995;product=molybdopterin-containing oxidoreductase family protein;protein_id=WP_000387839.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 130593 131279 . + . ID=gene-CCO46_RS17000;Name=CCO46_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17000;old_locus_tag=CCO46_16985 NZ_NPOH01000014.1 Protein Homology CDS 130593 131279 . + 0 ID=cds-WP_000808044.1;Parent=gene-CCO46_RS17000;Dbxref=GenBank:WP_000808044.1;Name=WP_000808044.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808044.1;locus_tag=CCO46_RS17000;product=helix-turn-helix domain-containing protein;protein_id=WP_000808044.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 131327 132775 . - . ID=gene-CCO46_RS17005;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CCO46_RS17005;old_locus_tag=CCO46_16990 NZ_NPOH01000014.1 Protein Homology CDS 131327 132775 . - 0 ID=cds-WP_000668655.1;Parent=gene-CCO46_RS17005;Dbxref=GenBank:WP_000668655.1;Name=WP_000668655.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=CCO46_RS17005;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668655.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 132985 133227 . + . ID=gene-CCO46_RS17010;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=CCO46_RS17010;old_locus_tag=CCO46_16995 NZ_NPOH01000014.1 Protein Homology CDS 132985 133227 . + 0 ID=cds-WP_001124944.1;Parent=gene-CCO46_RS17010;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=CCO46_RS17010;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 133228 134127 . + . ID=gene-CCO46_RS17015;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=CCO46_RS17015;old_locus_tag=CCO46_17000 NZ_NPOH01000014.1 Protein Homology CDS 133228 134127 . + 0 ID=cds-WP_000348073.1;Parent=gene-CCO46_RS17015;Dbxref=GenBank:WP_000348073.1;Name=WP_000348073.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=CCO46_RS17015;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348073.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 134151 136013 . + . ID=gene-CCO46_RS17020;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CCO46_RS17020;old_locus_tag=CCO46_17005 NZ_NPOH01000014.1 Protein Homology CDS 134151 136013 . + 0 ID=cds-WP_000006778.1;Parent=gene-CCO46_RS17020;Dbxref=GenBank:WP_000006778.1;Name=WP_000006778.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=CCO46_RS17020;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006778.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 136070 137044 . + . ID=gene-CCO46_RS17025;Name=CCO46_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17025;old_locus_tag=CCO46_17010 NZ_NPOH01000014.1 Protein Homology CDS 136070 137044 . + 0 ID=cds-WP_001199869.1;Parent=gene-CCO46_RS17025;Dbxref=GenBank:WP_001199869.1;Name=WP_001199869.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=CCO46_RS17025;product=aldo/keto reductase;protein_id=WP_001199869.1;transl_table=11 NZ_NPOH01000014.1 RefSeq pseudogene 137052 137143 . + . ID=gene-CCO46_RS25890;Name=CCO46_RS25890;end_range=137143,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25890;partial=true;pseudo=true;start_range=.,137052 NZ_NPOH01000014.1 Protein Homology CDS 137052 137143 . + 0 ID=cds-CCO46_RS25890;Parent=gene-CCO46_RS25890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=137143,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO46_RS25890;partial=true;product=hypothetical protein;pseudo=true;start_range=.,137052;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 137148 137663 . - . ID=gene-CCO46_RS17030;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=CCO46_RS17030;old_locus_tag=CCO46_17015 NZ_NPOH01000014.1 Protein Homology CDS 137148 137663 . - 0 ID=cds-WP_000154063.1;Parent=gene-CCO46_RS17030;Dbxref=GenBank:WP_000154063.1;Name=WP_000154063.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=CCO46_RS17030;product=phosphatidylglycerophosphatase A;protein_id=WP_000154063.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 137641 138621 . - . ID=gene-CCO46_RS17035;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=CCO46_RS17035;old_locus_tag=CCO46_17020 NZ_NPOH01000014.1 Protein Homology CDS 137641 138621 . - 0 ID=cds-WP_000752133.1;Parent=gene-CCO46_RS17035;Dbxref=GenBank:WP_000752133.1;Name=WP_000752133.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=CCO46_RS17035;product=thiamine-phosphate kinase;protein_id=WP_000752133.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 138700 139119 . - . ID=gene-CCO46_RS17040;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CCO46_RS17040;old_locus_tag=CCO46_17025 NZ_NPOH01000014.1 Protein Homology CDS 138700 139119 . - 0 ID=cds-WP_000801129.1;Parent=gene-CCO46_RS17040;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=CCO46_RS17040;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 139140 139610 . - . ID=gene-CCO46_RS17045;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=CCO46_RS17045;old_locus_tag=CCO46_17030 NZ_NPOH01000014.1 Protein Homology CDS 139140 139610 . - 0 ID=cds-WP_001021372.1;Parent=gene-CCO46_RS17045;Dbxref=GenBank:WP_001021372.1;Name=WP_001021372.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=CCO46_RS17045;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021372.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 139699 140802 . - . ID=gene-CCO46_RS17050;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CCO46_RS17050;old_locus_tag=CCO46_17035 NZ_NPOH01000014.1 Protein Homology CDS 139699 140802 . - 0 ID=cds-WP_001150218.1;Parent=gene-CCO46_RS17050;Dbxref=GenBank:WP_001150218.1;Name=WP_001150218.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=CCO46_RS17050;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150218.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 140806 141255 . - . ID=gene-CCO46_RS17055;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CCO46_RS17055;old_locus_tag=CCO46_17040 NZ_NPOH01000014.1 Protein Homology CDS 140806 141255 . - 0 ID=cds-WP_000543533.1;Parent=gene-CCO46_RS17055;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=CCO46_RS17055;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 141407 141946 . + . ID=gene-CCO46_RS17060;Name=CCO46_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17060;old_locus_tag=CCO46_17045 NZ_NPOH01000014.1 Protein Homology CDS 141407 141946 . + 0 ID=cds-WP_043991110.1;Parent=gene-CCO46_RS17060;Dbxref=GenBank:WP_043991110.1;Name=WP_043991110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=CCO46_RS17060;product=DUF3251 domain-containing protein;protein_id=WP_043991110.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 142246 143109 . + . ID=gene-CCO46_RS17065;Name=CCO46_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17065;old_locus_tag=CCO46_17050 NZ_NPOH01000014.1 Protein Homology CDS 142246 143109 . + 0 ID=cds-WP_000752021.1;Parent=gene-CCO46_RS17065;Dbxref=GenBank:WP_000752021.1;Name=WP_000752021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=CCO46_RS17065;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11 NZ_NPOH01000014.1 RefSeq gene 143193 143300 . - . ID=gene-CCO46_RS24985;Name=CCO46_RS24985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24985 NZ_NPOH01000014.1 Protein Homology CDS 143193 143300 . - 0 ID=cds-WP_000176312.1;Parent=gene-CCO46_RS24985;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=CCO46_RS24985;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11 ##sequence-region NZ_NPOH01000015.1 1 140930 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000015.1 RefSeq region 1 140930 . + . ID=NZ_NPOH01000015.1:1..140930;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000015.1 RefSeq gene 429 1280 . - . ID=gene-CCO46_RS17075;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=CCO46_RS17075;old_locus_tag=CCO46_17060 NZ_NPOH01000015.1 Protein Homology CDS 429 1280 . - 0 ID=cds-WP_000201804.1;Parent=gene-CCO46_RS17075;Dbxref=GenBank:WP_000201804.1;Name=WP_000201804.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=CCO46_RS17075;product=glutamate racemase;protein_id=WP_000201804.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 1225 3069 . - . ID=gene-CCO46_RS17080;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=CCO46_RS17080;old_locus_tag=CCO46_17065 NZ_NPOH01000015.1 Protein Homology CDS 1225 3069 . - 0 ID=cds-WP_000591403.1;Parent=gene-CCO46_RS17080;Dbxref=GenBank:WP_000591403.1;Name=WP_000591403.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=CCO46_RS17080;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591403.1;transl_table=11 NZ_NPOH01000015.1 cmsearch riboswitch 3136 3328 . - . ID=id-NZ_NPOH01000015.1:3136..3328;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPOH01000015.1 RefSeq gene 3443 4543 . + . ID=gene-CCO46_RS17085;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=CCO46_RS17085;old_locus_tag=CCO46_17070 NZ_NPOH01000015.1 Protein Homology CDS 3443 4543 . + 0 ID=cds-WP_000186981.1;Parent=gene-CCO46_RS17085;Dbxref=GenBank:WP_000186981.1;Name=WP_000186981.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=CCO46_RS17085;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000186981.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 4590 4949 . - . ID=gene-CCO46_RS17090;Name=CCO46_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17090;old_locus_tag=CCO46_17075 NZ_NPOH01000015.1 Protein Homology CDS 4590 4949 . - 0 ID=cds-WP_000813838.1;Parent=gene-CCO46_RS17090;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=CCO46_RS17090;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 4965 5600 . - . ID=gene-CCO46_RS17095;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=CCO46_RS17095;old_locus_tag=CCO46_17080 NZ_NPOH01000015.1 Protein Homology CDS 4965 5600 . - 0 ID=cds-WP_000971958.1;Parent=gene-CCO46_RS17095;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=CCO46_RS17095;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 5799 7199 . + . ID=gene-CCO46_RS17105;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO46_RS17105;old_locus_tag=CCO46_17090 NZ_NPOH01000015.1 Protein Homology CDS 5799 7199 . + 0 ID=cds-WP_001120791.1;Parent=gene-CCO46_RS17105;Dbxref=GenBank:WP_001120791.1;Name=WP_001120791.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=CCO46_RS17105;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120791.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 7182 8099 . - . ID=gene-CCO46_RS17110;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=CCO46_RS17110;old_locus_tag=CCO46_17095 NZ_NPOH01000015.1 Protein Homology CDS 7182 8099 . - 0 ID=cds-WP_001025919.1;Parent=gene-CCO46_RS17110;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=CCO46_RS17110;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 8384 9760 . - . ID=gene-CCO46_RS17120;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CCO46_RS17120;old_locus_tag=CCO46_17105 NZ_NPOH01000015.1 Protein Homology CDS 8384 9760 . - 0 ID=cds-WP_001230048.1;Parent=gene-CCO46_RS17120;Dbxref=GenBank:WP_001230048.1;Name=WP_001230048.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=CCO46_RS17120;product=argininosuccinate lyase;protein_id=WP_001230048.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 9878 10654 . - . ID=gene-CCO46_RS17125;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=CCO46_RS17125;old_locus_tag=CCO46_17110 NZ_NPOH01000015.1 Protein Homology CDS 9878 10654 . - 0 ID=cds-WP_001575262.1;Parent=gene-CCO46_RS17125;Dbxref=GenBank:WP_001575262.1;Name=WP_001575262.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=CCO46_RS17125;product=acetylglutamate kinase;protein_id=WP_001575262.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 10662 11666 . - . ID=gene-CCO46_RS17130;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=CCO46_RS17130;old_locus_tag=CCO46_17115 NZ_NPOH01000015.1 Protein Homology CDS 10662 11666 . - 0 ID=cds-WP_000935336.1;Parent=gene-CCO46_RS17130;Dbxref=GenBank:WP_000935336.1;Name=WP_000935336.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=CCO46_RS17130;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935336.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 11755 12906 . + . ID=gene-CCO46_RS17135;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=CCO46_RS17135;old_locus_tag=CCO46_17120 NZ_NPOH01000015.1 Protein Homology CDS 11755 12906 . + 0 ID=cds-WP_000800208.1;Parent=gene-CCO46_RS17135;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=CCO46_RS17135;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 13298 15949 . + . ID=gene-CCO46_RS17145;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=CCO46_RS17145;old_locus_tag=CCO46_17125 NZ_NPOH01000015.1 Protein Homology CDS 13298 15949 . + 0 ID=cds-WP_097363413.1;Parent=gene-CCO46_RS17145;Dbxref=GenBank:WP_097363413.1;Name=WP_097363413.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=CCO46_RS17145;product=phosphoenolpyruvate carboxylase;protein_id=WP_097363413.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 16160 17893 . + . ID=gene-CCO46_RS17150;Name=CCO46_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17150;old_locus_tag=CCO46_17130 NZ_NPOH01000015.1 Protein Homology CDS 16160 17893 . + 0 ID=cds-WP_001528929.1;Parent=gene-CCO46_RS17150;Dbxref=GenBank:WP_001528929.1;Name=WP_001528929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=CCO46_RS17150;product=phosphoethanolamine transferase CptA;protein_id=WP_001528929.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 18054 18890 . + . ID=gene-CCO46_RS17155;Name=CCO46_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17155;old_locus_tag=CCO46_17135 NZ_NPOH01000015.1 Protein Homology CDS 18054 18890 . + 0 ID=cds-WP_000274595.1;Parent=gene-CCO46_RS17155;Dbxref=GenBank:WP_000274595.1;Name=WP_000274595.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506508.1;locus_tag=CCO46_RS17155;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274595.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 19145 19807 . + . ID=gene-CCO46_RS17160;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=CCO46_RS17160;old_locus_tag=CCO46_17140 NZ_NPOH01000015.1 Protein Homology CDS 19145 19807 . + 0 ID=cds-WP_000424866.1;Parent=gene-CCO46_RS17160;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=CCO46_RS17160;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 19819 20922 . + . ID=gene-CCO46_RS17165;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=CCO46_RS17165;old_locus_tag=CCO46_17145 NZ_NPOH01000015.1 Protein Homology CDS 19819 20922 . + 0 ID=cds-WP_097363414.1;Parent=gene-CCO46_RS17165;Dbxref=GenBank:WP_097363414.1;Name=WP_097363414.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=CCO46_RS17165;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_097363414.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 21181 21804 . + . ID=gene-CCO46_RS17170;Name=CCO46_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17170;old_locus_tag=CCO46_17150 NZ_NPOH01000015.1 Protein Homology CDS 21181 21804 . + 0 ID=cds-WP_000666689.1;Parent=gene-CCO46_RS17170;Dbxref=GenBank:WP_000666689.1;Name=WP_000666689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=CCO46_RS17170;product=DUF1287 domain-containing protein;protein_id=WP_000666689.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 21862 24042 . - . ID=gene-CCO46_RS17175;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=CCO46_RS17175;old_locus_tag=CCO46_17155 NZ_NPOH01000015.1 Protein Homology CDS 21862 24042 . - 0 ID=cds-WP_000108105.1;Parent=gene-CCO46_RS17175;Dbxref=GenBank:WP_000108105.1;Name=WP_000108105.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=CCO46_RS17175;product=catalase/peroxidase HPI;protein_id=WP_000108105.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 24207 25097 . - . ID=gene-CCO46_RS17180;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=CCO46_RS17180;old_locus_tag=CCO46_17160 NZ_NPOH01000015.1 Protein Homology CDS 24207 25097 . - 0 ID=cds-WP_000007507.1;Parent=gene-CCO46_RS17180;Dbxref=GenBank:WP_000007507.1;Name=WP_000007507.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=CCO46_RS17180;product=methylenetetrahydrofolate reductase;protein_id=WP_000007507.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 25292 26848 . - . ID=gene-CCO46_RS17185;Name=CCO46_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17185;old_locus_tag=CCO46_17165 NZ_NPOH01000015.1 Protein Homology CDS 25292 26848 . - 0 ID=cds-WP_097363415.1;Parent=gene-CCO46_RS17185;Dbxref=GenBank:WP_097363415.1;Name=WP_097363415.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=CCO46_RS17185;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_097363415.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 26984 28108 . + . ID=gene-CCO46_RS17190;Name=CCO46_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17190;old_locus_tag=CCO46_17170 NZ_NPOH01000015.1 Protein Homology CDS 26984 28108 . + 0 ID=cds-WP_058331575.1;Parent=gene-CCO46_RS17190;Dbxref=GenBank:WP_058331575.1;Name=WP_058331575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=CCO46_RS17190;product=hypothetical protein;protein_id=WP_058331575.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 28343 29341 . + . ID=gene-CCO46_RS17195;Name=CCO46_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17195;old_locus_tag=CCO46_17175 NZ_NPOH01000015.1 Protein Homology CDS 28343 29341 . + 0 ID=cds-WP_058331574.1;Parent=gene-CCO46_RS17195;Dbxref=GenBank:WP_058331574.1;Name=WP_058331574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=CCO46_RS17195;product=hypothetical protein;protein_id=WP_058331574.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 29344 30201 . + . ID=gene-CCO46_RS17200;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=CCO46_RS17200;old_locus_tag=CCO46_17180 NZ_NPOH01000015.1 Protein Homology CDS 29344 30201 . + 0 ID=cds-WP_000398251.1;Parent=gene-CCO46_RS17200;Dbxref=GenBank:WP_000398251.1;Name=WP_000398251.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=CCO46_RS17200;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398251.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 30327 32759 . - . ID=gene-CCO46_RS17205;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=CCO46_RS17205;old_locus_tag=CCO46_17185 NZ_NPOH01000015.1 Protein Homology CDS 30327 32759 . - 0 ID=cds-WP_023138073.1;Parent=gene-CCO46_RS17205;Dbxref=GenBank:WP_023138073.1;Name=WP_023138073.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=CCO46_RS17205;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_023138073.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 32762 33922 . - . ID=gene-CCO46_RS17210;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=CCO46_RS17210;old_locus_tag=CCO46_17190 NZ_NPOH01000015.1 Protein Homology CDS 32762 33922 . - 0 ID=cds-WP_057519881.1;Parent=gene-CCO46_RS17210;Dbxref=GenBank:WP_057519881.1;Name=WP_057519881.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=CCO46_RS17210;product=cystathionine gamma-synthase;protein_id=WP_057519881.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 34187 34504 . + . ID=gene-CCO46_RS17215;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=CCO46_RS17215;old_locus_tag=CCO46_17195 NZ_NPOH01000015.1 Protein Homology CDS 34187 34504 . + 0 ID=cds-WP_000852811.1;Parent=gene-CCO46_RS17215;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=CCO46_RS17215;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 34961 36751 . + . ID=gene-CCO46_RS17220;Name=CCO46_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17220;old_locus_tag=CCO46_17200 NZ_NPOH01000015.1 Protein Homology CDS 34961 36751 . + 0 ID=cds-WP_000899639.1;Parent=gene-CCO46_RS17220;Dbxref=GenBank:WP_000899639.1;Name=WP_000899639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=CCO46_RS17220;product=aryl-sulfate sulfotransferase;protein_id=WP_000899639.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 36952 37614 . + . ID=gene-CCO46_RS17225;Name=CCO46_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17225;old_locus_tag=CCO46_17205 NZ_NPOH01000015.1 Protein Homology CDS 36952 37614 . + 0 ID=cds-WP_000792797.1;Parent=gene-CCO46_RS17225;Dbxref=GenBank:WP_000792797.1;Name=WP_000792797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=CCO46_RS17225;product=TIGR02117 family protein;protein_id=WP_000792797.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 37660 37872 . - . ID=gene-CCO46_RS17230;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=CCO46_RS17230;old_locus_tag=CCO46_17210 NZ_NPOH01000015.1 Protein Homology CDS 37660 37872 . - 0 ID=cds-WP_000715284.1;Parent=gene-CCO46_RS17230;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=CCO46_RS17230;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 38076 40274 . + . ID=gene-CCO46_RS17235;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CCO46_RS17235;old_locus_tag=CCO46_17215 NZ_NPOH01000015.1 Protein Homology CDS 38076 40274 . + 0 ID=cds-WP_000109398.1;Parent=gene-CCO46_RS17235;Dbxref=GenBank:WP_000109398.1;Name=WP_000109398.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=CCO46_RS17235;product=primosomal protein N';protein_id=WP_000109398.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 40429 41454 . + . ID=gene-CCO46_RS17240;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=CCO46_RS17240;old_locus_tag=CCO46_17220 NZ_NPOH01000015.1 Protein Homology CDS 40429 41454 . + 0 ID=cds-WP_000841337.1;Parent=gene-CCO46_RS17240;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=CCO46_RS17240;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 41548 42522 . + . ID=gene-CCO46_RS17245;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=CCO46_RS17245;old_locus_tag=CCO46_17225 NZ_NPOH01000015.1 Protein Homology CDS 41548 42522 . + 0 ID=cds-WP_000068811.1;Parent=gene-CCO46_RS17245;Dbxref=GenBank:WP_000068811.1;Name=WP_000068811.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=CCO46_RS17245;product=cell division protein FtsN;protein_id=WP_000068811.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 42614 43144 . + . ID=gene-CCO46_RS17250;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CCO46_RS17250;old_locus_tag=CCO46_17230 NZ_NPOH01000015.1 Protein Homology CDS 42614 43144 . + 0 ID=cds-WP_000208240.1;Parent=gene-CCO46_RS17250;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=CCO46_RS17250;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 43154 44485 . + . ID=gene-CCO46_RS17255;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CCO46_RS17255;old_locus_tag=CCO46_17235 NZ_NPOH01000015.1 Protein Homology CDS 43154 44485 . + 0 ID=cds-WP_001293360.1;Parent=gene-CCO46_RS17255;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=CCO46_RS17255;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293360.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 44552 45481 . + . ID=gene-CCO46_RS17260;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=CCO46_RS17260;old_locus_tag=CCO46_17240 NZ_NPOH01000015.1 Protein Homology CDS 44552 45481 . + 0 ID=cds-WP_000139639.1;Parent=gene-CCO46_RS17260;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=CCO46_RS17260;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 45574 46059 . + . ID=gene-CCO46_RS17265;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=CCO46_RS17265;old_locus_tag=CCO46_17245 NZ_NPOH01000015.1 Protein Homology CDS 45574 46059 . + 0 ID=cds-WP_000872918.1;Parent=gene-CCO46_RS17265;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=CCO46_RS17265;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 46281 46520 . - . ID=gene-CCO46_RS17270;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=CCO46_RS17270;old_locus_tag=CCO46_17250 NZ_NPOH01000015.1 Protein Homology CDS 46281 46520 . - 0 ID=cds-WP_000051370.1;Parent=gene-CCO46_RS17270;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=CCO46_RS17270;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 46919 47764 . + . ID=gene-CCO46_RS17275;Name=CCO46_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17275;old_locus_tag=CCO46_17255 NZ_NPOH01000015.1 Protein Homology CDS 46919 47764 . + 0 ID=cds-WP_000084285.1;Parent=gene-CCO46_RS17275;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=CCO46_RS17275;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 47785 49293 . + . ID=gene-CCO46_RS17280;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CCO46_RS17280;old_locus_tag=CCO46_17260 NZ_NPOH01000015.1 Protein Homology CDS 47785 49293 . + 0 ID=cds-WP_000136808.1;Parent=gene-CCO46_RS17280;Dbxref=GenBank:WP_000136808.1;Name=WP_000136808.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=CCO46_RS17280;product=glycerol kinase GlpK;protein_id=WP_000136808.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 49405 50415 . + . ID=gene-CCO46_RS17285;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=CCO46_RS17285;old_locus_tag=CCO46_17265 NZ_NPOH01000015.1 Protein Homology CDS 49405 50415 . + 0 ID=cds-WP_020838240.1;Parent=gene-CCO46_RS17285;Dbxref=GenBank:WP_020838240.1;Name=WP_020838240.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=CCO46_RS17285;product=class II fructose-bisphosphatase;protein_id=WP_020838240.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 50512 51258 . + . ID=gene-CCO46_RS17290;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=CCO46_RS17290;old_locus_tag=CCO46_17270 NZ_NPOH01000015.1 Protein Homology CDS 50512 51258 . + 0 ID=cds-WP_023202521.1;Parent=gene-CCO46_RS17290;Dbxref=GenBank:WP_023202521.1;Name=WP_023202521.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=CCO46_RS17290;product=ferredoxin--NADP(+) reductase;protein_id=WP_023202521.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 51368 51796 . - . ID=gene-CCO46_RS17295;Name=CCO46_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17295;old_locus_tag=CCO46_17275 NZ_NPOH01000015.1 Protein Homology CDS 51368 51796 . - 0 ID=cds-WP_000155237.1;Parent=gene-CCO46_RS17295;Dbxref=GenBank:WP_000155237.1;Name=WP_000155237.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=CCO46_RS17295;product=DUF805 domain-containing protein;protein_id=WP_000155237.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 51897 52493 . + . ID=gene-CCO46_RS17300;Name=CCO46_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17300;old_locus_tag=CCO46_17280 NZ_NPOH01000015.1 Protein Homology CDS 51897 52493 . + 0 ID=cds-WP_000802241.1;Parent=gene-CCO46_RS17300;Dbxref=GenBank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=CCO46_RS17300;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 52606 53373 . + . ID=gene-CCO46_RS17305;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CCO46_RS17305;old_locus_tag=CCO46_17285 NZ_NPOH01000015.1 Protein Homology CDS 52606 53373 . + 0 ID=cds-WP_001216335.1;Parent=gene-CCO46_RS17305;Dbxref=GenBank:WP_001216335.1;Name=WP_001216335.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=CCO46_RS17305;product=triose-phosphate isomerase;protein_id=WP_001216335.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 53465 54229 . - . ID=gene-CCO46_RS17310;Name=CCO46_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17310;old_locus_tag=CCO46_17290 NZ_NPOH01000015.1 Protein Homology CDS 53465 54229 . - 0 ID=cds-WP_001088049.1;Parent=gene-CCO46_RS17310;Dbxref=GenBank:WP_001088049.1;Name=WP_001088049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=CCO46_RS17310;product=epimerase;protein_id=WP_001088049.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 54239 54529 . - . ID=gene-CCO46_RS17315;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=CCO46_RS17315;old_locus_tag=CCO46_17295 NZ_NPOH01000015.1 Protein Homology CDS 54239 54529 . - 0 ID=cds-WP_001543603.1;Parent=gene-CCO46_RS17315;Dbxref=GenBank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=CCO46_RS17315;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 54612 55487 . - . ID=gene-CCO46_RS17320;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=CCO46_RS17320;old_locus_tag=CCO46_17300 NZ_NPOH01000015.1 Protein Homology CDS 54612 55487 . - 0 ID=cds-WP_000774150.1;Parent=gene-CCO46_RS17320;Dbxref=GenBank:WP_000774150.1;Name=WP_000774150.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=CCO46_RS17320;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=WP_000774150.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 55516 56538 . - . ID=gene-CCO46_RS17325;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=CCO46_RS17325;old_locus_tag=CCO46_17305 NZ_NPOH01000015.1 Protein Homology CDS 55516 56538 . - 0 ID=cds-WP_000090737.1;Parent=gene-CCO46_RS17325;Dbxref=GenBank:WP_000090737.1;Name=WP_000090737.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=CCO46_RS17325;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000090737.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 56567 57568 . - . ID=gene-CCO46_RS17330;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=CCO46_RS17330;old_locus_tag=CCO46_17310 NZ_NPOH01000015.1 Protein Homology CDS 56567 57568 . - 0 ID=cds-WP_000981826.1;Parent=gene-CCO46_RS17330;Dbxref=GenBank:WP_000981826.1;Name=WP_000981826.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=CCO46_RS17330;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_000981826.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 57565 58608 . - . ID=gene-CCO46_RS17335;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=CCO46_RS17335;old_locus_tag=CCO46_17315 NZ_NPOH01000015.1 Protein Homology CDS 57565 58608 . - 0 ID=cds-WP_000911133.1;Parent=gene-CCO46_RS17335;Dbxref=GenBank:WP_000911133.1;Name=WP_000911133.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=CCO46_RS17335;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911133.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 58602 60137 . - . ID=gene-CCO46_RS17340;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=CCO46_RS17340;old_locus_tag=CCO46_17320 NZ_NPOH01000015.1 Protein Homology CDS 58602 60137 . - 0 ID=cds-WP_001167245.1;Parent=gene-CCO46_RS17340;Dbxref=GenBank:WP_001167245.1;Name=WP_001167245.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=CCO46_RS17340;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001167245.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 60393 61352 . + . ID=gene-CCO46_RS17345;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=CCO46_RS17345;old_locus_tag=CCO46_17325 NZ_NPOH01000015.1 Protein Homology CDS 60393 61352 . + 0 ID=cds-WP_001283049.1;Parent=gene-CCO46_RS17345;Dbxref=GenBank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=CCO46_RS17345;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 61439 63031 . + . ID=gene-CCO46_RS17350;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=CCO46_RS17350;old_locus_tag=CCO46_17330 NZ_NPOH01000015.1 Protein Homology CDS 61439 63031 . + 0 ID=cds-WP_000113082.1;Parent=gene-CCO46_RS17350;Dbxref=GenBank:WP_000113082.1;Name=WP_000113082.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=CCO46_RS17350;product=autoinducer-2 kinase;protein_id=WP_000113082.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 63045 63395 . + . ID=gene-CCO46_RS17355;Name=CCO46_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17355;old_locus_tag=CCO46_17335 NZ_NPOH01000015.1 Protein Homology CDS 63045 63395 . + 0 ID=cds-WP_001173083.1;Parent=gene-CCO46_RS17355;Dbxref=GenBank:WP_001173083.1;Name=WP_001173083.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=CCO46_RS17355;product=cupin domain-containing protein;protein_id=WP_001173083.1;transl_table=11 NZ_NPOH01000015.1 RefSeq pseudogene 63485 63622 . - . ID=gene-CCO46_RS17360;Name=CCO46_RS17360;end_range=63622,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS17360;old_locus_tag=CCO46_17340;partial=true;pseudo=true NZ_NPOH01000015.1 Protein Homology CDS 63485 63622 . - 0 ID=cds-CCO46_RS17360;Parent=gene-CCO46_RS17360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;end_range=63622,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO46_RS17360;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 NZ_NPOH01000015.1 RefSeq pseudogene 63677 63802 . - . ID=gene-CCO46_RS17365;Name=CCO46_RS17365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS17365;old_locus_tag=CCO46_17345;partial=true;pseudo=true;start_range=.,63677 NZ_NPOH01000015.1 Protein Homology CDS 63677 63802 . - 0 ID=cds-CCO46_RS17365;Parent=gene-CCO46_RS17365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=CCO46_RS17365;partial=true;product=hypothetical protein;pseudo=true;start_range=.,63677;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 63900 64622 . - . ID=gene-CCO46_RS17370;Name=CCO46_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17370;old_locus_tag=CCO46_17350 NZ_NPOH01000015.1 Protein Homology CDS 63900 64622 . - 0 ID=cds-WP_001535809.1;Parent=gene-CCO46_RS17370;Dbxref=GenBank:WP_001535809.1;Name=WP_001535809.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=CCO46_RS17370;product=GntR family transcriptional regulator;protein_id=WP_001535809.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 64685 65725 . - . ID=gene-CCO46_RS17375;Name=CCO46_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17375;old_locus_tag=CCO46_17355 NZ_NPOH01000015.1 Protein Homology CDS 64685 65725 . - 0 ID=cds-WP_000557882.1;Parent=gene-CCO46_RS17375;Dbxref=GenBank:WP_000557882.1;Name=WP_000557882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=CCO46_RS17375;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557882.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 65735 66694 . - . ID=gene-CCO46_RS17380;Name=CCO46_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17380;old_locus_tag=CCO46_17360 NZ_NPOH01000015.1 Protein Homology CDS 65735 66694 . - 0 ID=cds-WP_097363416.1;Parent=gene-CCO46_RS17380;Dbxref=GenBank:WP_097363416.1;Name=WP_097363416.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=CCO46_RS17380;product=aminoimidazole riboside kinase;protein_id=WP_097363416.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 66705 68039 . - . ID=gene-CCO46_RS17385;Name=CCO46_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17385;old_locus_tag=CCO46_17365 NZ_NPOH01000015.1 Protein Homology CDS 66705 68039 . - 0 ID=cds-WP_000777314.1;Parent=gene-CCO46_RS17385;Dbxref=GenBank:WP_000777314.1;Name=WP_000777314.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=CCO46_RS17385;product=MFS transporter;protein_id=WP_000777314.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 68304 69059 . - . ID=gene-CCO46_RS17390;Name=CCO46_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17390;old_locus_tag=CCO46_17370 NZ_NPOH01000015.1 Protein Homology CDS 68304 69059 . - 0 ID=cds-WP_000750756.1;Parent=gene-CCO46_RS17390;Dbxref=GenBank:WP_000750756.1;Name=WP_000750756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO46_RS17390;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750756.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 69160 70149 . - . ID=gene-CCO46_RS17395;Name=CCO46_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17395;old_locus_tag=CCO46_17375 NZ_NPOH01000015.1 Protein Homology CDS 69160 70149 . - 0 ID=cds-WP_097363417.1;Parent=gene-CCO46_RS17395;Dbxref=GenBank:WP_097363417.1;Name=WP_097363417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=CCO46_RS17395;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_097363417.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 70353 71315 . - . ID=gene-CCO46_RS17400;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CCO46_RS17400;old_locus_tag=CCO46_17380 NZ_NPOH01000015.1 Protein Homology CDS 70353 71315 . - 0 ID=cds-WP_000591793.1;Parent=gene-CCO46_RS17400;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=CCO46_RS17400;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 71500 72402 . - . ID=gene-CCO46_RS17405;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=CCO46_RS17405;old_locus_tag=CCO46_17385 NZ_NPOH01000015.1 Protein Homology CDS 71500 72402 . - 0 ID=cds-WP_080160282.1;Parent=gene-CCO46_RS17405;Dbxref=GenBank:WP_080160282.1;Name=WP_080160282.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=CCO46_RS17405;product=CDF family cation-efflux transporter FieF;protein_id=WP_080160282.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 72550 73050 . - . ID=gene-CCO46_RS17410;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=CCO46_RS17410;old_locus_tag=CCO46_17390 NZ_NPOH01000015.1 Protein Homology CDS 72550 73050 . - 0 ID=cds-WP_001233463.1;Parent=gene-CCO46_RS17410;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=CCO46_RS17410;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 73201 73899 . + . ID=gene-CCO46_RS17415;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=CCO46_RS17415;old_locus_tag=CCO46_17395 NZ_NPOH01000015.1 Protein Homology CDS 73201 73899 . + 0 ID=cds-WP_001033731.1;Parent=gene-CCO46_RS17415;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=CCO46_RS17415;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 73896 75269 . + . ID=gene-CCO46_RS17420;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=CCO46_RS17420;old_locus_tag=CCO46_17400 NZ_NPOH01000015.1 Protein Homology CDS 73896 75269 . + 0 ID=cds-WP_000580402.1;Parent=gene-CCO46_RS17420;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=CCO46_RS17420;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 75320 75715 . - . ID=gene-CCO46_RS17425;Name=CCO46_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17425;old_locus_tag=CCO46_17405 NZ_NPOH01000015.1 Protein Homology CDS 75320 75715 . - 0 ID=cds-WP_000133446.1;Parent=gene-CCO46_RS17425;Dbxref=GenBank:WP_000133446.1;Name=WP_000133446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=CCO46_RS17425;product=nuclear transport factor 2 family protein;protein_id=WP_000133446.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 75727 76416 . - . ID=gene-CCO46_RS17430;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=CCO46_RS17430;old_locus_tag=CCO46_17410 NZ_NPOH01000015.1 Protein Homology CDS 75727 76416 . - 0 ID=cds-WP_000559229.1;Parent=gene-CCO46_RS17430;Dbxref=GenBank:WP_000559229.1;Name=WP_000559229.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=CCO46_RS17430;product=6-hydroxyaminopurine reductase;protein_id=WP_000559229.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 76486 77106 . - . ID=gene-CCO46_RS17435;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=CCO46_RS17435;old_locus_tag=CCO46_17415 NZ_NPOH01000015.1 Protein Homology CDS 76486 77106 . - 0 ID=cds-WP_000122632.1;Parent=gene-CCO46_RS17435;Dbxref=GenBank:WP_000122632.1;Name=WP_000122632.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=CCO46_RS17435;product=superoxide dismutase [Mn];protein_id=WP_000122632.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 77435 78418 . + . ID=gene-CCO46_RS17440;Name=CCO46_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17440;old_locus_tag=CCO46_17420 NZ_NPOH01000015.1 Protein Homology CDS 77435 78418 . + 0 ID=cds-WP_000812822.1;Parent=gene-CCO46_RS17440;Dbxref=GenBank:WP_000812822.1;Name=WP_000812822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=CCO46_RS17440;product=TRAP transporter substrate-binding protein;protein_id=WP_000812822.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 78437 78952 . + . ID=gene-CCO46_RS17445;Name=CCO46_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17445;old_locus_tag=CCO46_17425 NZ_NPOH01000015.1 Protein Homology CDS 78437 78952 . + 0 ID=cds-WP_001091413.1;Parent=gene-CCO46_RS17445;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=CCO46_RS17445;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 78945 80252 . + . ID=gene-CCO46_RS17450;Name=CCO46_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17450;old_locus_tag=CCO46_17430 NZ_NPOH01000015.1 Protein Homology CDS 78945 80252 . + 0 ID=cds-WP_000566800.1;Parent=gene-CCO46_RS17450;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=CCO46_RS17450;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 80410 81093 . - . ID=gene-CCO46_RS17455;Name=CCO46_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17455;old_locus_tag=CCO46_17435 NZ_NPOH01000015.1 Protein Homology CDS 80410 81093 . - 0 ID=cds-WP_000378721.1;Parent=gene-CCO46_RS17455;Dbxref=GenBank:WP_000378721.1;Name=WP_000378721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=CCO46_RS17455;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378721.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 81712 82746 . + . ID=gene-CCO46_RS17460;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=CCO46_RS17460;old_locus_tag=CCO46_17440 NZ_NPOH01000015.1 Protein Homology CDS 81712 82746 . + 0 ID=cds-WP_000063541.1;Parent=gene-CCO46_RS17460;Dbxref=GenBank:WP_000063541.1;Name=WP_000063541.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=CCO46_RS17460;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063541.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 82743 83591 . - . ID=gene-CCO46_RS17465;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=CCO46_RS17465;old_locus_tag=CCO46_17445 NZ_NPOH01000015.1 Protein Homology CDS 82743 83591 . - 0 ID=cds-WP_000013290.1;Parent=gene-CCO46_RS17465;Dbxref=GenBank:WP_000013290.1;Name=WP_000013290.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=CCO46_RS17465;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013290.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 83744 84580 . - . ID=gene-CCO46_RS17470;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=CCO46_RS17470;old_locus_tag=CCO46_17450 NZ_NPOH01000015.1 Protein Homology CDS 83744 84580 . - 0 ID=cds-WP_000217109.1;Parent=gene-CCO46_RS17470;Dbxref=GenBank:WP_000217109.1;Name=WP_000217109.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=CCO46_RS17470;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217109.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 84868 86337 . + . ID=gene-CCO46_RS17475;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=CCO46_RS17475;old_locus_tag=CCO46_17455 NZ_NPOH01000015.1 Protein Homology CDS 84868 86337 . + 0 ID=cds-WP_000143966.1;Parent=gene-CCO46_RS17475;Dbxref=GenBank:WP_000143966.1;Name=WP_000143966.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=CCO46_RS17475;product=rhamnulokinase;protein_id=WP_000143966.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 86334 87593 . + . ID=gene-CCO46_RS17480;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=CCO46_RS17480;old_locus_tag=CCO46_17460 NZ_NPOH01000015.1 Protein Homology CDS 86334 87593 . + 0 ID=cds-WP_000211468.1;Parent=gene-CCO46_RS17480;Dbxref=GenBank:WP_000211468.1;Name=WP_000211468.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=CCO46_RS17480;product=L-rhamnose isomerase;protein_id=WP_000211468.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 87736 88563 . + . ID=gene-CCO46_RS17485;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=CCO46_RS17485;old_locus_tag=CCO46_17465 NZ_NPOH01000015.1 Protein Homology CDS 87736 88563 . + 0 ID=cds-WP_001179685.1;Parent=gene-CCO46_RS17485;Dbxref=GenBank:WP_001179685.1;Name=WP_001179685.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=CCO46_RS17485;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179685.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 88690 89838 . + . ID=gene-CCO46_RS17490;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO46_RS17490;old_locus_tag=CCO46_17470 NZ_NPOH01000015.1 Protein Homology CDS 88690 89838 . + 0 ID=cds-WP_000009254.1;Parent=gene-CCO46_RS17490;Dbxref=GenBank:WP_000009254.1;Name=WP_000009254.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=CCO46_RS17490;product=lactaldehyde reductase;protein_id=WP_000009254.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 89835 90149 . + . ID=gene-CCO46_RS17495;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=CCO46_RS17495;old_locus_tag=CCO46_17475 NZ_NPOH01000015.1 Protein Homology CDS 89835 90149 . + 0 ID=cds-WP_000619478.1;Parent=gene-CCO46_RS17495;Dbxref=GenBank:WP_000619478.1;Name=WP_000619478.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=CCO46_RS17495;product=L-rhamnose mutarotase;protein_id=WP_000619478.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 90238 90786 . - . ID=gene-CCO46_RS17500;Name=CCO46_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17500;old_locus_tag=CCO46_17480 NZ_NPOH01000015.1 Protein Homology CDS 90238 90786 . - 0 ID=cds-WP_001517951.1;Parent=gene-CCO46_RS17500;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=CCO46_RS17500;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 90887 91546 . + . ID=gene-CCO46_RS17505;Name=CCO46_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17505;old_locus_tag=CCO46_17485 NZ_NPOH01000015.1 Protein Homology CDS 90887 91546 . + 0 ID=cds-WP_000683586.1;Parent=gene-CCO46_RS17505;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=CCO46_RS17505;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 91546 91869 . + . ID=gene-CCO46_RS17510;Name=CCO46_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17510;old_locus_tag=CCO46_17490 NZ_NPOH01000015.1 Protein Homology CDS 91546 91869 . + 0 ID=cds-WP_058331568.1;Parent=gene-CCO46_RS17510;Dbxref=GenBank:WP_058331568.1;Name=WP_058331568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=CCO46_RS17510;product=AzlD domain-containing protein;protein_id=WP_058331568.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 92225 93325 . - . ID=gene-CCO46_RS17515;Name=CCO46_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17515;old_locus_tag=CCO46_17495 NZ_NPOH01000015.1 Protein Homology CDS 92225 93325 . - 0 ID=cds-WP_097363418.1;Parent=gene-CCO46_RS17515;Dbxref=GenBank:WP_097363418.1;Name=WP_097363418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=CCO46_RS17515;product=YiiG family protein;protein_id=WP_097363418.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 93518 94354 . - . ID=gene-CCO46_RS17520;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CCO46_RS17520;old_locus_tag=CCO46_17500 NZ_NPOH01000015.1 Protein Homology CDS 93518 94354 . - 0 ID=cds-WP_001059743.1;Parent=gene-CCO46_RS17520;Dbxref=GenBank:WP_001059743.1;Name=WP_001059743.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=CCO46_RS17520;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059743.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 94549 97599 . + . ID=gene-CCO46_RS17530;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO46_RS17530;old_locus_tag=CCO46_17510 NZ_NPOH01000015.1 Protein Homology CDS 94549 97599 . + 0 ID=cds-WP_077248424.1;Parent=gene-CCO46_RS17530;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=CCO46_RS17530;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:95134..95136%2Caa:Sec);transl_table=11 NZ_NPOH01000015.1 RefSeq gene 97612 98514 . + . ID=gene-CCO46_RS17535;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO46_RS17535;old_locus_tag=CCO46_17515 NZ_NPOH01000015.1 Protein Homology CDS 97612 98514 . + 0 ID=cds-WP_000331361.1;Parent=gene-CCO46_RS17535;Dbxref=GenBank:WP_000331361.1;Name=WP_000331361.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=CCO46_RS17535;product=formate dehydrogenase subunit beta;protein_id=WP_000331361.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 98511 99146 . + . ID=gene-CCO46_RS17540;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=CCO46_RS17540;old_locus_tag=CCO46_17520 NZ_NPOH01000015.1 Protein Homology CDS 98511 99146 . + 0 ID=cds-WP_000829025.1;Parent=gene-CCO46_RS17540;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=CCO46_RS17540;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 99143 100072 . + . ID=gene-CCO46_RS17545;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=CCO46_RS17545;old_locus_tag=CCO46_17525 NZ_NPOH01000015.1 Protein Homology CDS 99143 100072 . + 0 ID=cds-WP_094887808.1;Parent=gene-CCO46_RS17545;Dbxref=GenBank:WP_094887808.1;Name=WP_094887808.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=CCO46_RS17545;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_094887808.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 100119 100409 . - . ID=gene-CCO46_RS17550;Name=CCO46_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17550;old_locus_tag=CCO46_17530 NZ_NPOH01000015.1 Protein Homology CDS 100119 100409 . - 0 ID=cds-WP_000362050.1;Parent=gene-CCO46_RS17550;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=CCO46_RS17550;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 100410 100721 . - . ID=gene-CCO46_RS17555;Name=CCO46_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17555;old_locus_tag=CCO46_17535 NZ_NPOH01000015.1 Protein Homology CDS 100410 100721 . - 0 ID=cds-WP_001159630.1;Parent=gene-CCO46_RS17555;Dbxref=GenBank:WP_001159630.1;Name=WP_001159630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=CCO46_RS17555;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159630.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 100939 101868 . + . ID=gene-CCO46_RS17560;Name=CCO46_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17560;old_locus_tag=CCO46_17540 NZ_NPOH01000015.1 Protein Homology CDS 100939 101868 . + 0 ID=cds-WP_023181423.1;Parent=gene-CCO46_RS17560;Dbxref=GenBank:WP_023181423.1;Name=WP_023181423.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=CCO46_RS17560;product=alpha/beta hydrolase;protein_id=WP_023181423.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 101954 102265 . + . ID=gene-CCO46_RS17565;Name=CCO46_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17565;old_locus_tag=CCO46_17545 NZ_NPOH01000015.1 Protein Homology CDS 101954 102265 . + 0 ID=cds-WP_000558166.1;Parent=gene-CCO46_RS17565;Dbxref=GenBank:WP_000558166.1;Name=WP_000558166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=CCO46_RS17565;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558166.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 102262 102708 . + . ID=gene-CCO46_RS17570;Name=CCO46_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17570;old_locus_tag=CCO46_17550 NZ_NPOH01000015.1 Protein Homology CDS 102262 102708 . + 0 ID=cds-WP_001259012.1;Parent=gene-CCO46_RS17570;Dbxref=GenBank:WP_001259012.1;Name=WP_001259012.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=CCO46_RS17570;product=helix-turn-helix domain-containing protein;protein_id=WP_001259012.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 102723 103664 . - . ID=gene-CCO46_RS17575;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=CCO46_RS17575;old_locus_tag=CCO46_17555 NZ_NPOH01000015.1 Protein Homology CDS 102723 103664 . - 0 ID=cds-WP_001518251.1;Parent=gene-CCO46_RS17575;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=CCO46_RS17575;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 103709 104146 . - . ID=gene-CCO46_RS17580;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CCO46_RS17580;old_locus_tag=CCO46_17560 NZ_NPOH01000015.1 Protein Homology CDS 103709 104146 . - 0 ID=cds-WP_000560969.1;Parent=gene-CCO46_RS17580;Dbxref=GenBank:WP_000560969.1;Name=WP_000560969.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=CCO46_RS17580;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560969.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 104143 105015 . - . ID=gene-CCO46_RS17585;Name=CCO46_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17585;old_locus_tag=CCO46_17565 NZ_NPOH01000015.1 Protein Homology CDS 104143 105015 . - 0 ID=cds-WP_000921423.1;Parent=gene-CCO46_RS17585;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=CCO46_RS17585;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 105009 105608 . - . ID=gene-CCO46_RS17590;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=CCO46_RS17590;old_locus_tag=CCO46_17570 NZ_NPOH01000015.1 Protein Homology CDS 105009 105608 . - 0 ID=cds-WP_023249109.1;Parent=gene-CCO46_RS17590;Dbxref=GenBank:WP_023249109.1;Name=WP_023249109.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=CCO46_RS17590;product=glucose-1-phosphatase;protein_id=WP_023249109.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 105799 106602 . - . ID=gene-CCO46_RS17595;Name=CCO46_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17595;old_locus_tag=CCO46_17575 NZ_NPOH01000015.1 Protein Homology CDS 105799 106602 . - 0 ID=cds-WP_000059693.1;Parent=gene-CCO46_RS17595;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=CCO46_RS17595;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 106636 107532 . - . ID=gene-CCO46_RS17600;Name=CCO46_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17600;old_locus_tag=CCO46_17580 NZ_NPOH01000015.1 Protein Homology CDS 106636 107532 . - 0 ID=cds-WP_001520529.1;Parent=gene-CCO46_RS17600;Dbxref=GenBank:WP_001520529.1;Name=WP_001520529.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=CCO46_RS17600;product=sugar kinase;protein_id=WP_001520529.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 107697 108593 . + . ID=gene-CCO46_RS17605;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=CCO46_RS17605;old_locus_tag=CCO46_17585 NZ_NPOH01000015.1 Protein Homology CDS 107697 108593 . + 0 ID=cds-WP_076727652.1;Parent=gene-CCO46_RS17605;Dbxref=GenBank:WP_076727652.1;Name=WP_076727652.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=CCO46_RS17605;product=sulfolactaldehyde 3-reductase;protein_id=WP_076727652.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 108616 109494 . + . ID=gene-CCO46_RS17610;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=CCO46_RS17610;old_locus_tag=CCO46_17590 NZ_NPOH01000015.1 Protein Homology CDS 108616 109494 . + 0 ID=cds-WP_058331561.1;Parent=gene-CCO46_RS17610;Dbxref=GenBank:WP_058331561.1;Name=WP_058331561.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=CCO46_RS17610;product=sulfofructosephosphate aldolase;protein_id=WP_058331561.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 109510 110751 . + . ID=gene-CCO46_RS17615;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=CCO46_RS17615;old_locus_tag=CCO46_17595 NZ_NPOH01000015.1 Protein Homology CDS 109510 110751 . + 0 ID=cds-WP_000870942.1;Parent=gene-CCO46_RS17615;Dbxref=GenBank:WP_000870942.1;Name=WP_000870942.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=CCO46_RS17615;product=sulfoquinovose isomerase;protein_id=WP_000870942.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 110755 111612 . + . ID=gene-CCO46_RS17620;Name=CCO46_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17620;old_locus_tag=CCO46_17600 NZ_NPOH01000015.1 Protein Homology CDS 110755 111612 . + 0 ID=cds-WP_079981717.1;Parent=gene-CCO46_RS17620;Dbxref=GenBank:WP_079981717.1;Name=WP_079981717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=CCO46_RS17620;product=aldose-1-epimerase;protein_id=WP_079981717.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 111656 113692 . + . ID=gene-CCO46_RS17625;Name=CCO46_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17625;old_locus_tag=CCO46_17605 NZ_NPOH01000015.1 Protein Homology CDS 111656 113692 . + 0 ID=cds-WP_001087017.1;Parent=gene-CCO46_RS17625;Dbxref=GenBank:WP_001087017.1;Name=WP_001087017.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=CCO46_RS17625;product=alpha-glucosidase;protein_id=WP_001087017.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 113738 115120 . + . ID=gene-CCO46_RS17630;Name=CCO46_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17630;old_locus_tag=CCO46_17610 NZ_NPOH01000015.1 Protein Homology CDS 113738 115120 . + 0 ID=cds-WP_000084250.1;Parent=gene-CCO46_RS17630;Dbxref=GenBank:WP_000084250.1;Name=WP_000084250.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=CCO46_RS17630;product=MFS transporter;protein_id=WP_000084250.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 115166 116587 . + . ID=gene-CCO46_RS17635;Name=CCO46_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17635;old_locus_tag=CCO46_17615 NZ_NPOH01000015.1 Protein Homology CDS 115166 116587 . + 0 ID=cds-WP_000064888.1;Parent=gene-CCO46_RS17635;Dbxref=GenBank:WP_000064888.1;Name=WP_000064888.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=CCO46_RS17635;product=MFS transporter;protein_id=WP_000064888.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 116655 117347 . + . ID=gene-CCO46_RS17640;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=CCO46_RS17640;old_locus_tag=CCO46_17620 NZ_NPOH01000015.1 Protein Homology CDS 116655 117347 . + 0 ID=cds-WP_000838827.1;Parent=gene-CCO46_RS17640;Dbxref=GenBank:WP_000838827.1;Name=WP_000838827.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=CCO46_RS17640;product=porin OmpL;protein_id=WP_000838827.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 117504 118352 . + . ID=gene-CCO46_RS17645;Name=CCO46_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17645;old_locus_tag=CCO46_17625 NZ_NPOH01000015.1 Protein Homology CDS 117504 118352 . + 0 ID=cds-WP_001042086.1;Parent=gene-CCO46_RS17645;Dbxref=GenBank:WP_001042086.1;Name=WP_001042086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=CCO46_RS17645;product=STM4015 family protein;protein_id=WP_001042086.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 118365 119390 . + . ID=gene-CCO46_RS17650;Name=CCO46_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17650;old_locus_tag=CCO46_17630 NZ_NPOH01000015.1 Protein Homology CDS 118365 119390 . + 0 ID=cds-WP_015633192.1;Parent=gene-CCO46_RS17650;Dbxref=GenBank:WP_015633192.1;Name=WP_015633192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=CCO46_RS17650;product=STM4014 family protein;protein_id=WP_015633192.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 119383 120258 . + . ID=gene-CCO46_RS17655;Name=CCO46_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17655;old_locus_tag=CCO46_17635 NZ_NPOH01000015.1 Protein Homology CDS 119383 120258 . + 0 ID=cds-WP_023202527.1;Parent=gene-CCO46_RS17655;Dbxref=GenBank:WP_023202527.1;Name=WP_023202527.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=CCO46_RS17655;product=STM4013/SEN3800 family hydrolase;protein_id=WP_023202527.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 120260 121501 . + . ID=gene-CCO46_RS17660;Name=CCO46_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17660;old_locus_tag=CCO46_17640 NZ_NPOH01000015.1 Protein Homology CDS 120260 121501 . + 0 ID=cds-WP_097363419.1;Parent=gene-CCO46_RS17660;Dbxref=GenBank:WP_097363419.1;Name=WP_097363419.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=CCO46_RS17660;product=STM4012 family radical SAM protein;protein_id=WP_097363419.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 121498 122376 . + . ID=gene-CCO46_RS17665;Name=CCO46_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17665;old_locus_tag=CCO46_17645 NZ_NPOH01000015.1 Protein Homology CDS 121498 122376 . + 0 ID=cds-WP_001534602.1;Parent=gene-CCO46_RS17665;Dbxref=GenBank:WP_001534602.1;Name=WP_001534602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=CCO46_RS17665;product=STM4011 family radical SAM protein;protein_id=WP_001534602.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 122361 123095 . + . ID=gene-CCO46_RS17670;Name=CCO46_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17670;old_locus_tag=CCO46_17650 NZ_NPOH01000015.1 Protein Homology CDS 122361 123095 . + 0 ID=cds-WP_061372280.1;Parent=gene-CCO46_RS17670;Dbxref=GenBank:WP_061372280.1;Name=WP_061372280.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=CCO46_RS17670;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_061372280.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 123150 124973 . - . ID=gene-CCO46_RS17675;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CCO46_RS17675;old_locus_tag=CCO46_17655 NZ_NPOH01000015.1 Protein Homology CDS 123150 124973 . - 0 ID=cds-WP_000572060.1;Parent=gene-CCO46_RS17675;Dbxref=GenBank:WP_000572060.1;Name=WP_000572060.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=CCO46_RS17675;product=ribosome-dependent GTPase TypA;protein_id=WP_000572060.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 125349 126758 . + . ID=gene-CCO46_RS17685;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CCO46_RS17685;old_locus_tag=CCO46_17665 NZ_NPOH01000015.1 Protein Homology CDS 125349 126758 . + 0 ID=cds-WP_001271699.1;Parent=gene-CCO46_RS17685;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=CCO46_RS17685;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 127033 128082 . + . ID=gene-CCO46_RS17700;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=CCO46_RS17700;old_locus_tag=CCO46_17680 NZ_NPOH01000015.1 Protein Homology CDS 127033 128082 . + 0 ID=cds-WP_000146190.1;Parent=gene-CCO46_RS17700;Dbxref=GenBank:WP_000146190.1;Name=WP_000146190.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=CCO46_RS17700;product=nitrogen regulation protein NR(II);protein_id=WP_000146190.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 128091 129500 . + . ID=gene-CCO46_RS17705;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=CCO46_RS17705;old_locus_tag=CCO46_17685 NZ_NPOH01000015.1 Protein Homology CDS 128091 129500 . + 0 ID=cds-WP_001188782.1;Parent=gene-CCO46_RS17705;Dbxref=GenBank:WP_001188782.1;Name=WP_001188782.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=CCO46_RS17705;product=nitrogen regulation protein NR(I);protein_id=WP_001188782.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 129613 129723 . + . ID=gene-CCO46_RS17710;Name=CCO46_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17710;old_locus_tag=CCO46_17690 NZ_NPOH01000015.1 Protein Homology CDS 129613 129723 . + 0 ID=cds-WP_001578131.1;Parent=gene-CCO46_RS17710;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=CCO46_RS17710;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 129813 131186 . - . ID=gene-CCO46_RS17715;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=CCO46_RS17715;old_locus_tag=CCO46_17695 NZ_NPOH01000015.1 Protein Homology CDS 129813 131186 . - 0 ID=cds-WP_000003520.1;Parent=gene-CCO46_RS17715;Dbxref=GenBank:WP_000003520.1;Name=WP_000003520.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=CCO46_RS17715;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003520.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 131375 131890 . - . ID=gene-CCO46_RS17720;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=CCO46_RS17720;old_locus_tag=CCO46_17700 NZ_NPOH01000015.1 Protein Homology CDS 131375 131890 . - 0 ID=cds-WP_000743292.1;Parent=gene-CCO46_RS17720;Dbxref=GenBank:WP_000743292.1;Name=WP_000743292.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=CCO46_RS17720;product=Der GTPase-activating protein YihI;protein_id=WP_000743292.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 132009 132233 . - . ID=gene-CCO46_RS17725;Name=CCO46_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17725;old_locus_tag=CCO46_17705 NZ_NPOH01000015.1 Protein Homology CDS 132009 132233 . - 0 ID=cds-WP_001541209.1;Parent=gene-CCO46_RS17725;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=CCO46_RS17725;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 132473 133105 . + . ID=gene-CCO46_RS17730;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CCO46_RS17730;old_locus_tag=CCO46_17710 NZ_NPOH01000015.1 Protein Homology CDS 132473 133105 . + 0 ID=cds-WP_000183331.1;Parent=gene-CCO46_RS17730;Dbxref=GenBank:WP_000183331.1;Name=WP_000183331.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=CCO46_RS17730;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183331.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 133440 136226 . - . ID=gene-CCO46_RS17735;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CCO46_RS17735;old_locus_tag=CCO46_17715 NZ_NPOH01000015.1 Protein Homology CDS 133440 136226 . - 0 ID=cds-WP_097363420.1;Parent=gene-CCO46_RS17735;Dbxref=GenBank:WP_097363420.1;Name=WP_097363420.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=CCO46_RS17735;product=DNA polymerase I;protein_id=WP_097363420.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 136614 137522 . + . ID=gene-CCO46_RS17745;Name=CCO46_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17745;old_locus_tag=CCO46_17725 NZ_NPOH01000015.1 Protein Homology CDS 136614 137522 . + 0 ID=cds-WP_080207989.1;Parent=gene-CCO46_RS17745;Dbxref=GenBank:WP_080207989.1;Name=WP_080207989.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=CCO46_RS17745;product=acyltransferase;protein_id=WP_080207989.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 137535 138158 . - . ID=gene-CCO46_RS17750;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=CCO46_RS17750;old_locus_tag=CCO46_17730 NZ_NPOH01000015.1 Protein Homology CDS 137535 138158 . - 0 ID=cds-WP_000725364.1;Parent=gene-CCO46_RS17750;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=CCO46_RS17750;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 138175 139161 . - . ID=gene-CCO46_RS17755;Name=CCO46_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17755;old_locus_tag=CCO46_17735 NZ_NPOH01000015.1 Protein Homology CDS 138175 139161 . - 0 ID=cds-WP_094882665.1;Parent=gene-CCO46_RS17755;Dbxref=GenBank:WP_094882665.1;Name=WP_094882665.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=CCO46_RS17755;product=serine/threonine protein kinase;protein_id=WP_094882665.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 139238 139507 . - . ID=gene-CCO46_RS17760;Name=CCO46_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17760;old_locus_tag=CCO46_17740 NZ_NPOH01000015.1 Protein Homology CDS 139238 139507 . - 0 ID=cds-WP_000649858.1;Parent=gene-CCO46_RS17760;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=CCO46_RS17760;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 139577 140161 . + . ID=gene-CCO46_RS17765;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CCO46_RS17765;old_locus_tag=CCO46_17745 NZ_NPOH01000015.1 Protein Homology CDS 139577 140161 . + 0 ID=cds-WP_097363421.1;Parent=gene-CCO46_RS17765;Dbxref=GenBank:WP_097363421.1;Name=WP_097363421.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=CCO46_RS17765;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_097363421.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 140158 140673 . + . ID=gene-CCO46_RS17770;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CCO46_RS17770;old_locus_tag=CCO46_17750 NZ_NPOH01000015.1 Protein Homology CDS 140158 140673 . + 0 ID=cds-WP_010989085.1;Parent=gene-CCO46_RS17770;Dbxref=GenBank:WP_010989085.1;Name=WP_010989085.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=CCO46_RS17770;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_010989085.1;transl_table=11 NZ_NPOH01000015.1 RefSeq gene 140808 140923 . - . ID=gene-CCO46_RS17775;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO46_RS17775;old_locus_tag=CCO46_17755 NZ_NPOH01000015.1 cmsearch rRNA 140808 140923 . - . ID=rna-CCO46_RS17775;Parent=gene-CCO46_RS17775;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS17775;product=5S ribosomal RNA NZ_NPOH01000015.1 cmsearch exon 140808 140923 . - . ID=exon-CCO46_RS17775-1;Parent=rna-CCO46_RS17775;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS17775;product=5S ribosomal RNA ##sequence-region NZ_NPOH01000016.1 1 129516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000016.1 RefSeq region 1 129516 . + . ID=NZ_NPOH01000016.1:1..129516;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000016.1 RefSeq gene 337 1041 . + . ID=gene-CCO46_RS17780;Name=CCO46_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17780;old_locus_tag=CCO46_17760 NZ_NPOH01000016.1 Protein Homology CDS 337 1041 . + 0 ID=cds-WP_001131148.1;Parent=gene-CCO46_RS17780;Dbxref=GenBank:WP_001131148.1;Name=WP_001131148.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=CCO46_RS17780;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131148.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 1053 2480 . + . ID=gene-CCO46_RS17785;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=CCO46_RS17785;old_locus_tag=CCO46_17765 NZ_NPOH01000016.1 Protein Homology CDS 1053 2480 . + 0 ID=cds-WP_000202071.1;Parent=gene-CCO46_RS17785;Dbxref=GenBank:WP_000202071.1;Name=WP_000202071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=CCO46_RS17785;product=multidrug transporter subunit MdtD;protein_id=WP_000202071.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 2446 3444 . - . ID=gene-CCO46_RS17790;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=CCO46_RS17790;old_locus_tag=CCO46_17770 NZ_NPOH01000016.1 Protein Homology CDS 2446 3444 . - 0 ID=cds-WP_000224487.1;Parent=gene-CCO46_RS17790;Dbxref=GenBank:WP_000224487.1;Name=WP_000224487.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=CCO46_RS17790;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224487.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 3448 4377 . - . ID=gene-CCO46_RS17795;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO46_RS17795;old_locus_tag=CCO46_17775 NZ_NPOH01000016.1 Protein Homology CDS 3448 4377 . - 0 ID=cds-WP_000844728.1;Parent=gene-CCO46_RS17795;Dbxref=GenBank:WP_000844728.1;Name=WP_000844728.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=CCO46_RS17795;product=ribokinase;protein_id=WP_000844728.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 4510 5400 . - . ID=gene-CCO46_RS17800;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=CCO46_RS17800;old_locus_tag=CCO46_17780 NZ_NPOH01000016.1 Protein Homology CDS 4510 5400 . - 0 ID=cds-WP_001056260.1;Parent=gene-CCO46_RS17800;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=CCO46_RS17800;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 5425 6390 . - . ID=gene-CCO46_RS17805;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=CCO46_RS17805;old_locus_tag=CCO46_17785 NZ_NPOH01000016.1 Protein Homology CDS 5425 6390 . - 0 ID=cds-WP_000211345.1;Parent=gene-CCO46_RS17805;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=CCO46_RS17805;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 6396 7901 . - . ID=gene-CCO46_RS17810;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=CCO46_RS17810;old_locus_tag=CCO46_17790 NZ_NPOH01000016.1 Protein Homology CDS 6396 7901 . - 0 ID=cds-WP_000339359.1;Parent=gene-CCO46_RS17810;Dbxref=GenBank:WP_000339359.1;Name=WP_000339359.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=CCO46_RS17810;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339359.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 7909 8328 . - . ID=gene-CCO46_RS17815;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CCO46_RS17815;old_locus_tag=CCO46_17795 NZ_NPOH01000016.1 Protein Homology CDS 7909 8328 . - 0 ID=cds-WP_097363422.1;Parent=gene-CCO46_RS17815;Dbxref=GenBank:WP_097363422.1;Name=WP_097363422.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=CCO46_RS17815;product=D-ribose pyranase;protein_id=WP_097363422.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 8525 10393 . - . ID=gene-CCO46_RS17820;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=CCO46_RS17820;old_locus_tag=CCO46_17800 NZ_NPOH01000016.1 Protein Homology CDS 8525 10393 . - 0 ID=cds-WP_000102338.1;Parent=gene-CCO46_RS17820;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=CCO46_RS17820;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 10741 12237 . + . ID=gene-CCO46_RS17825;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=CCO46_RS17825;old_locus_tag=CCO46_17805 NZ_NPOH01000016.1 Protein Homology CDS 10741 12237 . + 0 ID=cds-WP_000940975.1;Parent=gene-CCO46_RS17825;Dbxref=GenBank:WP_000940975.1;Name=WP_000940975.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=CCO46_RS17825;product=ATPase RavA;protein_id=WP_000940975.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 12231 13682 . + . ID=gene-CCO46_RS17830;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=CCO46_RS17830;old_locus_tag=CCO46_17810 NZ_NPOH01000016.1 Protein Homology CDS 12231 13682 . + 0 ID=cds-WP_076727592.1;Parent=gene-CCO46_RS17830;Dbxref=GenBank:WP_076727592.1;Name=WP_076727592.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=CCO46_RS17830;product=ATPase RavA stimulator ViaA;protein_id=WP_076727592.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 13687 14679 . - . ID=gene-CCO46_RS17835;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=CCO46_RS17835;old_locus_tag=CCO46_17815 NZ_NPOH01000016.1 Protein Homology CDS 13687 14679 . - 0 ID=cds-WP_000845123.1;Parent=gene-CCO46_RS17835;Dbxref=GenBank:WP_000845123.1;Name=WP_000845123.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=CCO46_RS17835;product=aspartate--ammonia ligase;protein_id=WP_000845123.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 14830 15288 . + . ID=gene-CCO46_RS17840;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=CCO46_RS17840;old_locus_tag=CCO46_17820 NZ_NPOH01000016.1 Protein Homology CDS 14830 15288 . + 0 ID=cds-WP_000433018.1;Parent=gene-CCO46_RS17840;Dbxref=GenBank:WP_000433018.1;Name=WP_000433018.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=CCO46_RS17840;product=transcriptional regulator AsnC;protein_id=WP_000433018.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 15378 15821 . + . ID=gene-CCO46_RS17845;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=CCO46_RS17845;old_locus_tag=CCO46_17825 NZ_NPOH01000016.1 Protein Homology CDS 15378 15821 . + 0 ID=cds-WP_000763722.1;Parent=gene-CCO46_RS17845;Dbxref=GenBank:WP_000763722.1;Name=WP_000763722.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=CCO46_RS17845;product=FMN-binding protein MioC;protein_id=WP_000763722.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 16200 18089 . + . ID=gene-CCO46_RS17850;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CCO46_RS17850;old_locus_tag=CCO46_17830 NZ_NPOH01000016.1 Protein Homology CDS 16200 18089 . + 0 ID=cds-WP_000499872.1;Parent=gene-CCO46_RS17850;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=CCO46_RS17850;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 18192 18815 . + . ID=gene-CCO46_RS17855;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CCO46_RS17855;old_locus_tag=CCO46_17835 NZ_NPOH01000016.1 Protein Homology CDS 18192 18815 . + 0 ID=cds-WP_001519938.1;Parent=gene-CCO46_RS17855;Dbxref=GenBank:WP_001519938.1;Name=WP_001519938.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=CCO46_RS17855;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001519938.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 19431 19811 . + . ID=gene-CCO46_RS17860;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=CCO46_RS17860;old_locus_tag=CCO46_17840 NZ_NPOH01000016.1 Protein Homology CDS 19431 19811 . + 0 ID=cds-WP_000116685.1;Parent=gene-CCO46_RS17860;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=CCO46_RS17860;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 19820 20635 . + . ID=gene-CCO46_RS17865;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CCO46_RS17865;old_locus_tag=CCO46_17845 NZ_NPOH01000016.1 Protein Homology CDS 19820 20635 . + 0 ID=cds-WP_000135632.1;Parent=gene-CCO46_RS17865;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=CCO46_RS17865;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 20682 20921 . + . ID=gene-CCO46_RS17870;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CCO46_RS17870;old_locus_tag=CCO46_17850 NZ_NPOH01000016.1 Protein Homology CDS 20682 20921 . + 0 ID=cds-WP_000429386.1;Parent=gene-CCO46_RS17870;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=CCO46_RS17870;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 20981 21451 . + . ID=gene-CCO46_RS17875;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=CCO46_RS17875;old_locus_tag=CCO46_17855 NZ_NPOH01000016.1 Protein Homology CDS 20981 21451 . + 0 ID=cds-WP_001052212.1;Parent=gene-CCO46_RS17875;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=CCO46_RS17875;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 21466 21999 . + . ID=gene-CCO46_RS17880;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=CCO46_RS17880;old_locus_tag=CCO46_17860 NZ_NPOH01000016.1 Protein Homology CDS 21466 21999 . + 0 ID=cds-WP_058331863.1;Parent=gene-CCO46_RS17880;Dbxref=GenBank:WP_058331863.1;Name=WP_058331863.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=CCO46_RS17880;product=F0F1 ATP synthase subunit delta;protein_id=WP_058331863.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 22012 23553 . + . ID=gene-CCO46_RS17885;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CCO46_RS17885;old_locus_tag=CCO46_17865 NZ_NPOH01000016.1 Protein Homology CDS 22012 23553 . + 0 ID=cds-WP_001176751.1;Parent=gene-CCO46_RS17885;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=CCO46_RS17885;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 23604 24467 . + . ID=gene-CCO46_RS17890;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CCO46_RS17890;old_locus_tag=CCO46_17870 NZ_NPOH01000016.1 Protein Homology CDS 23604 24467 . + 0 ID=cds-WP_000896506.1;Parent=gene-CCO46_RS17890;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=CCO46_RS17890;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 24494 25876 . + . ID=gene-CCO46_RS17895;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CCO46_RS17895;old_locus_tag=CCO46_17875 NZ_NPOH01000016.1 Protein Homology CDS 24494 25876 . + 0 ID=cds-WP_000190499.1;Parent=gene-CCO46_RS17895;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=CCO46_RS17895;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 25897 26316 . + . ID=gene-CCO46_RS17900;Name=CCO46_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17900;old_locus_tag=CCO46_17880 NZ_NPOH01000016.1 Protein Homology CDS 25897 26316 . + 0 ID=cds-WP_001251971.1;Parent=gene-CCO46_RS17900;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=CCO46_RS17900;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 26546 27244 . + . ID=gene-CCO46_RS17905;Name=CCO46_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17905;old_locus_tag=CCO46_17885 NZ_NPOH01000016.1 Protein Homology CDS 26546 27244 . + 0 ID=cds-WP_080160510.1;Parent=gene-CCO46_RS17905;Dbxref=GenBank:WP_080160510.1;Name=WP_080160510.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=CCO46_RS17905;product=Bax inhibitor-1/YccA family protein;protein_id=WP_080160510.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 27564 28934 . + . ID=gene-CCO46_RS17915;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CCO46_RS17915;old_locus_tag=CCO46_17895 NZ_NPOH01000016.1 Protein Homology CDS 27564 28934 . + 0 ID=cds-WP_000934851.1;Parent=gene-CCO46_RS17915;Dbxref=GenBank:WP_000934851.1;Name=WP_000934851.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=CCO46_RS17915;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934851.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 29123 30952 . + . ID=gene-CCO46_RS17920;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CCO46_RS17920;old_locus_tag=CCO46_17900 NZ_NPOH01000016.1 Protein Homology CDS 29123 30952 . + 0 ID=cds-WP_000334061.1;Parent=gene-CCO46_RS17920;Dbxref=GenBank:WP_000334061.1;Name=WP_000334061.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=CCO46_RS17920;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334061.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 31102 32859 . - . ID=gene-CCO46_RS17925;Name=CCO46_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17925;old_locus_tag=CCO46_17905 NZ_NPOH01000016.1 Protein Homology CDS 31102 32859 . - 0 ID=cds-WP_080208061.1;Parent=gene-CCO46_RS17925;Dbxref=GenBank:WP_080208061.1;Name=WP_080208061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=CCO46_RS17925;product=SgrR family transcriptional regulator;protein_id=WP_080208061.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 32954 33772 . + . ID=gene-CCO46_RS17930;Name=CCO46_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17930;old_locus_tag=CCO46_17910 NZ_NPOH01000016.1 Protein Homology CDS 32954 33772 . + 0 ID=cds-WP_023255014.1;Parent=gene-CCO46_RS17930;Dbxref=GenBank:WP_023255014.1;Name=WP_023255014.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=CCO46_RS17930;product=shikimate 5-dehydrogenase;protein_id=WP_023255014.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 33821 35194 . + . ID=gene-CCO46_RS17935;Name=CCO46_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17935;old_locus_tag=CCO46_17915 NZ_NPOH01000016.1 Protein Homology CDS 33821 35194 . + 0 ID=cds-WP_024797542.1;Parent=gene-CCO46_RS17935;Dbxref=GenBank:WP_024797542.1;Name=WP_024797542.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=CCO46_RS17935;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_024797542.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 35361 36401 . + . ID=gene-CCO46_RS17940;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=CCO46_RS17940;old_locus_tag=CCO46_17920 NZ_NPOH01000016.1 Protein Homology CDS 35361 36401 . + 0 ID=cds-WP_000867131.1;Parent=gene-CCO46_RS17940;Dbxref=GenBank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=CCO46_RS17940;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 36537 37496 . + . ID=gene-CCO46_RS17945;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CCO46_RS17945;old_locus_tag=CCO46_17925 NZ_NPOH01000016.1 Protein Homology CDS 36537 37496 . + 0 ID=cds-WP_000741630.1;Parent=gene-CCO46_RS17945;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=CCO46_RS17945;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 37496 38386 . + . ID=gene-CCO46_RS17950;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CCO46_RS17950;old_locus_tag=CCO46_17930 NZ_NPOH01000016.1 Protein Homology CDS 37496 38386 . + 0 ID=cds-WP_000212197.1;Parent=gene-CCO46_RS17950;Dbxref=GenBank:WP_000212197.1;Name=WP_000212197.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=CCO46_RS17950;product=phosphate ABC transporter permease PstA;protein_id=WP_000212197.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 38473 39246 . + . ID=gene-CCO46_RS17955;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CCO46_RS17955;old_locus_tag=CCO46_17935 NZ_NPOH01000016.1 Protein Homology CDS 38473 39246 . + 0 ID=cds-WP_000063118.1;Parent=gene-CCO46_RS17955;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=CCO46_RS17955;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 39261 39986 . + . ID=gene-CCO46_RS17960;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CCO46_RS17960;old_locus_tag=CCO46_17940 NZ_NPOH01000016.1 Protein Homology CDS 39261 39986 . + 0 ID=cds-WP_000377800.1;Parent=gene-CCO46_RS17960;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=CCO46_RS17960;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 40081 40746 . - . ID=gene-CCO46_RS17965;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=CCO46_RS17965;old_locus_tag=CCO46_17945 NZ_NPOH01000016.1 Protein Homology CDS 40081 40746 . - 0 ID=cds-WP_061371913.1;Parent=gene-CCO46_RS17965;Dbxref=GenBank:WP_061371913.1;Name=WP_061371913.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=CCO46_RS17965;product=6-phosphogluconate phosphatase;protein_id=WP_061371913.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 40915 42252 . + . ID=gene-CCO46_RS17970;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=CCO46_RS17970;old_locus_tag=CCO46_17950 NZ_NPOH01000016.1 Protein Homology CDS 40915 42252 . + 0 ID=cds-WP_058331868.1;Parent=gene-CCO46_RS17970;Dbxref=GenBank:WP_058331868.1;Name=WP_058331868.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=CCO46_RS17970;product=adenine permease AdeP;protein_id=WP_058331868.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 42297 42881 . - . ID=gene-CCO46_RS17975;Name=CCO46_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17975;old_locus_tag=CCO46_17955 NZ_NPOH01000016.1 Protein Homology CDS 42297 42881 . - 0 ID=cds-WP_001575173.1;Parent=gene-CCO46_RS17975;Dbxref=GenBank:WP_001575173.1;Name=WP_001575173.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=CCO46_RS17975;product=NADPH-dependent FMN reductase;protein_id=WP_001575173.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 42881 43636 . - . ID=gene-CCO46_RS17980;Name=CCO46_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS17980;old_locus_tag=CCO46_17960 NZ_NPOH01000016.1 Protein Homology CDS 42881 43636 . - 0 ID=cds-WP_000190678.1;Parent=gene-CCO46_RS17980;Dbxref=GenBank:WP_000190678.1;Name=WP_000190678.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=CCO46_RS17980;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190678.1;transl_table=11 NZ_NPOH01000016.1 RefSeq pseudogene 43794 44087 . - . ID=gene-CCO46_RS17985;Name=CCO46_RS17985;end_range=44087,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS17985;old_locus_tag=CCO46_17965;partial=true;pseudo=true NZ_NPOH01000016.1 Protein Homology CDS 43794 44087 . - 0 ID=cds-CCO46_RS17985;Parent=gene-CCO46_RS17985;Note=Involved in anaerobic NO protection%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=44087,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=CCO46_RS17985;partial=true;product=HTH-type transcriptional regulator YidZ;pseudo=true;transl_table=11 NZ_NPOH01000016.1 RefSeq pseudogene 44101 44490 . - . ID=gene-CCO46_RS17990;Name=CCO46_RS17990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS17990;old_locus_tag=CCO46_17970;partial=true;pseudo=true;start_range=.,44101 NZ_NPOH01000016.1 Protein Homology CDS 44101 44490 . - 0 ID=cds-CCO46_RS17990;Parent=gene-CCO46_RS17990;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=CCO46_RS17990;partial=true;product=MFS transporter;pseudo=true;start_range=.,44101;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 44673 46037 . - . ID=gene-CCO46_RS17995;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CCO46_RS17995;old_locus_tag=CCO46_17975 NZ_NPOH01000016.1 Protein Homology CDS 44673 46037 . - 0 ID=cds-WP_080160507.1;Parent=gene-CCO46_RS17995;Dbxref=GenBank:WP_080160507.1;Name=WP_080160507.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=CCO46_RS17995;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_080160507.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 46212 47276 . + . ID=gene-CCO46_RS18000;Name=CCO46_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18000;old_locus_tag=CCO46_17980 NZ_NPOH01000016.1 Protein Homology CDS 46212 47276 . + 0 ID=cds-WP_080160506.1;Parent=gene-CCO46_RS18000;Dbxref=GenBank:WP_080160506.1;Name=WP_080160506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018475.6;locus_tag=CCO46_RS18000;product=hypothetical protein;protein_id=WP_080160506.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 47577 49223 . - . ID=gene-CCO46_RS18005;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CCO46_RS18005;old_locus_tag=CCO46_17985 NZ_NPOH01000016.1 Protein Homology CDS 47577 49223 . - 0 ID=cds-WP_094887831.1;Parent=gene-CCO46_RS18005;Dbxref=GenBank:WP_094887831.1;Name=WP_094887831.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=CCO46_RS18005;product=membrane protein insertase YidC;protein_id=WP_094887831.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 49226 49483 . - . ID=gene-CCO46_RS18010;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CCO46_RS18010;old_locus_tag=CCO46_17990 NZ_NPOH01000016.1 Protein Homology CDS 49226 49483 . - 0 ID=cds-WP_001307474.1;Parent=gene-CCO46_RS18010;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=CCO46_RS18010;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 49447 49806 . - . ID=gene-CCO46_RS18015;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CCO46_RS18015;old_locus_tag=CCO46_17995 NZ_NPOH01000016.1 Protein Homology CDS 49447 49806 . - 0 ID=cds-WP_000239725.1;Parent=gene-CCO46_RS18015;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=CCO46_RS18015;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 49823 49963 . - . ID=gene-CCO46_RS18020;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CCO46_RS18020;old_locus_tag=CCO46_18000 NZ_NPOH01000016.1 Protein Homology CDS 49823 49963 . - 0 ID=cds-WP_000831330.1;Parent=gene-CCO46_RS18020;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=CCO46_RS18020;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 50192 50284 . - . ID=gene-CCO46_RS25895;Name=CCO46_RS25895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25895 NZ_NPOH01000016.1 Protein Homology CDS 50192 50284 . - 0 ID=cds-WP_418142141.1;Parent=gene-CCO46_RS25895;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=CCO46_RS25895;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 50624 52024 . + . ID=gene-CCO46_RS18025;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CCO46_RS18025;old_locus_tag=CCO46_18005 NZ_NPOH01000016.1 Protein Homology CDS 50624 52024 . + 0 ID=cds-WP_000059093.1;Parent=gene-CCO46_RS18025;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=CCO46_RS18025;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 52029 53129 . + . ID=gene-CCO46_RS18030;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CCO46_RS18030;old_locus_tag=CCO46_18010 NZ_NPOH01000016.1 Protein Homology CDS 52029 53129 . + 0 ID=cds-WP_000673474.1;Parent=gene-CCO46_RS18030;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=CCO46_RS18030;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 53327 54400 . + . ID=gene-CCO46_RS18035;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CCO46_RS18035;old_locus_tag=CCO46_18015 NZ_NPOH01000016.1 Protein Homology CDS 53327 54400 . + 0 ID=cds-WP_058331872.1;Parent=gene-CCO46_RS18035;Dbxref=GenBank:WP_058331872.1;Name=WP_058331872.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=CCO46_RS18035;product=DNA replication/repair protein RecF;protein_id=WP_058331872.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 54429 56843 . + . ID=gene-CCO46_RS18040;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CCO46_RS18040;old_locus_tag=CCO46_18020 NZ_NPOH01000016.1 Protein Homology CDS 54429 56843 . + 0 ID=cds-WP_000072047.1;Parent=gene-CCO46_RS18040;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=CCO46_RS18040;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 56862 57758 . - . ID=gene-CCO46_RS18045;Name=CCO46_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18045;old_locus_tag=CCO46_18025 NZ_NPOH01000016.1 Protein Homology CDS 56862 57758 . - 0 ID=cds-WP_001054591.1;Parent=gene-CCO46_RS18045;Dbxref=GenBank:WP_001054591.1;Name=WP_001054591.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=CCO46_RS18045;product=LysR family transcriptional regulator;protein_id=WP_001054591.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 57873 59066 . - . ID=gene-CCO46_RS18050;Name=CCO46_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18050;old_locus_tag=CCO46_18030 NZ_NPOH01000016.1 Protein Homology CDS 57873 59066 . - 0 ID=cds-WP_000975839.1;Parent=gene-CCO46_RS18050;Dbxref=GenBank:WP_000975839.1;Name=WP_000975839.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=CCO46_RS18050;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000975839.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 59080 60342 . - . ID=gene-CCO46_RS18055;Name=CCO46_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18055;old_locus_tag=CCO46_18035 NZ_NPOH01000016.1 Protein Homology CDS 59080 60342 . - 0 ID=cds-WP_058331874.1;Parent=gene-CCO46_RS18055;Dbxref=GenBank:WP_058331874.1;Name=WP_058331874.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=CCO46_RS18055;product=MFS transporter;protein_id=WP_058331874.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 60647 61492 . + . ID=gene-CCO46_RS18060;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=CCO46_RS18060;old_locus_tag=CCO46_18040 NZ_NPOH01000016.1 Protein Homology CDS 60647 61492 . + 0 ID=cds-WP_000985570.1;Parent=gene-CCO46_RS18060;Dbxref=GenBank:WP_000985570.1;Name=WP_000985570.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=CCO46_RS18060;product=sugar-phosphatase;protein_id=WP_000985570.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 61753 62442 . + . ID=gene-CCO46_RS18065;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=CCO46_RS18065;old_locus_tag=CCO46_18045 NZ_NPOH01000016.1 Protein Homology CDS 61753 62442 . + 0 ID=cds-WP_000174317.1;Parent=gene-CCO46_RS18065;Dbxref=GenBank:WP_000174317.1;Name=WP_000174317.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=CCO46_RS18065;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174317.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 62439 63317 . + . ID=gene-CCO46_RS18070;Name=CCO46_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18070;old_locus_tag=CCO46_18050 NZ_NPOH01000016.1 Protein Homology CDS 62439 63317 . + 0 ID=cds-WP_058331875.1;Parent=gene-CCO46_RS18070;Dbxref=GenBank:WP_058331875.1;Name=WP_058331875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=CCO46_RS18070;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_058331875.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 63301 63918 . + . ID=gene-CCO46_RS18075;Name=CCO46_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18075;old_locus_tag=CCO46_18055 NZ_NPOH01000016.1 Protein Homology CDS 63301 63918 . + 0 ID=cds-WP_001198744.1;Parent=gene-CCO46_RS18075;Dbxref=GenBank:WP_001198744.1;Name=WP_001198744.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=CCO46_RS18075;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198744.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 63915 65063 . + . ID=gene-CCO46_RS18080;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=CCO46_RS18080;old_locus_tag=CCO46_18060 NZ_NPOH01000016.1 Protein Homology CDS 63915 65063 . + 0 ID=cds-WP_097363423.1;Parent=gene-CCO46_RS18080;Dbxref=GenBank:WP_097363423.1;Name=WP_097363423.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=CCO46_RS18080;product=galactonate dehydratase;protein_id=WP_097363423.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 65148 66485 . + . ID=gene-CCO46_RS18085;Name=CCO46_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18085;old_locus_tag=CCO46_18065 NZ_NPOH01000016.1 Protein Homology CDS 65148 66485 . + 0 ID=cds-WP_000253524.1;Parent=gene-CCO46_RS18085;Dbxref=GenBank:WP_000253524.1;Name=WP_000253524.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=CCO46_RS18085;product=MFS transporter;protein_id=WP_000253524.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 66511 69246 . - . ID=gene-CCO46_RS18090;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=CCO46_RS18090;old_locus_tag=CCO46_18070 NZ_NPOH01000016.1 Protein Homology CDS 66511 69246 . - 0 ID=cds-WP_058331876.1;Parent=gene-CCO46_RS18090;Dbxref=GenBank:WP_058331876.1;Name=WP_058331876.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=CCO46_RS18090;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_058331876.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 69326 70366 . + . ID=gene-CCO46_RS18095;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=CCO46_RS18095;old_locus_tag=CCO46_18075 NZ_NPOH01000016.1 Protein Homology CDS 69326 70366 . + 0 ID=cds-WP_001202038.1;Parent=gene-CCO46_RS18095;Dbxref=GenBank:WP_001202038.1;Name=WP_001202038.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=CCO46_RS18095;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001202038.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 70339 71031 . - . ID=gene-CCO46_RS18100;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=CCO46_RS18100;old_locus_tag=CCO46_18080 NZ_NPOH01000016.1 Protein Homology CDS 70339 71031 . - 0 ID=cds-WP_001562512.1;Parent=gene-CCO46_RS18100;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=CCO46_RS18100;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 71161 72345 . + . ID=gene-CCO46_RS18105;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=CCO46_RS18105;old_locus_tag=CCO46_18085 NZ_NPOH01000016.1 Protein Homology CDS 71161 72345 . + 0 ID=cds-WP_097363424.1;Parent=gene-CCO46_RS18105;Dbxref=GenBank:WP_097363424.1;Name=WP_097363424.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=CCO46_RS18105;product=pentaheme c-type cytochrome TorC;protein_id=WP_097363424.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 72335 74887 . + . ID=gene-CCO46_RS18110;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=CCO46_RS18110;old_locus_tag=CCO46_18090 NZ_NPOH01000016.1 Protein Homology CDS 72335 74887 . + 0 ID=cds-WP_097363425.1;Parent=gene-CCO46_RS18110;Dbxref=GenBank:WP_097363425.1;Name=WP_097363425.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=CCO46_RS18110;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_097363425.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 74880 75512 . + . ID=gene-CCO46_RS18115;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=CCO46_RS18115;old_locus_tag=CCO46_18095 NZ_NPOH01000016.1 Protein Homology CDS 74880 75512 . + 0 ID=cds-WP_000595420.1;Parent=gene-CCO46_RS18115;Dbxref=GenBank:WP_000595420.1;Name=WP_000595420.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=CCO46_RS18115;product=molecular chaperone TorD;protein_id=WP_000595420.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 75702 77102 . + . ID=gene-CCO46_RS18120;Name=CCO46_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18120;old_locus_tag=CCO46_18100 NZ_NPOH01000016.1 Protein Homology CDS 75702 77102 . + 0 ID=cds-WP_000724469.1;Parent=gene-CCO46_RS18120;Dbxref=GenBank:WP_000724469.1;Name=WP_000724469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=CCO46_RS18120;product=cytochrome-c peroxidase;protein_id=WP_000724469.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 77108 77725 . + . ID=gene-CCO46_RS18125;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO46_RS18125;old_locus_tag=CCO46_18105 NZ_NPOH01000016.1 Protein Homology CDS 77108 77725 . + 0 ID=cds-WP_000888526.1;Parent=gene-CCO46_RS18125;Dbxref=GenBank:WP_000888526.1;Name=WP_000888526.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO46_RS18125;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000888526.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 77722 78381 . + . ID=gene-CCO46_RS18130;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=CCO46_RS18130;old_locus_tag=CCO46_18110 NZ_NPOH01000016.1 Protein Homology CDS 77722 78381 . + 0 ID=cds-WP_000990028.1;Parent=gene-CCO46_RS18130;Dbxref=GenBank:WP_000990028.1;Name=WP_000990028.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=CCO46_RS18130;product=heme exporter protein CcmB;protein_id=WP_000990028.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 78433 79170 . + . ID=gene-CCO46_RS18135;Name=CCO46_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18135;old_locus_tag=CCO46_18115 NZ_NPOH01000016.1 Protein Homology CDS 78433 79170 . + 0 ID=cds-WP_023217148.1;Parent=gene-CCO46_RS18135;Dbxref=GenBank:WP_023217148.1;Name=WP_023217148.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO46_RS18135;product=heme ABC transporter permease;protein_id=WP_023217148.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 79167 79379 . + . ID=gene-CCO46_RS18140;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=CCO46_RS18140;old_locus_tag=CCO46_18120 NZ_NPOH01000016.1 Protein Homology CDS 79167 79379 . + 0 ID=cds-WP_000074110.1;Parent=gene-CCO46_RS18140;Dbxref=GenBank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=CCO46_RS18140;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 79376 79855 . + . ID=gene-CCO46_RS18145;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=CCO46_RS18145;old_locus_tag=CCO46_18125 NZ_NPOH01000016.1 Protein Homology CDS 79376 79855 . + 0 ID=cds-WP_001053618.1;Parent=gene-CCO46_RS18145;Dbxref=GenBank:WP_001053618.1;Name=WP_001053618.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=CCO46_RS18145;product=cytochrome c maturation protein CcmE;protein_id=WP_001053618.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 79852 81783 . + . ID=gene-CCO46_RS18150;Name=CCO46_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18150;old_locus_tag=CCO46_18130 NZ_NPOH01000016.1 Protein Homology CDS 79852 81783 . + 0 ID=cds-WP_097363426.1;Parent=gene-CCO46_RS18150;Dbxref=GenBank:WP_097363426.1;Name=WP_097363426.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=CCO46_RS18150;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_097363426.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 81780 82337 . + . ID=gene-CCO46_RS18155;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=CCO46_RS18155;old_locus_tag=CCO46_18135 NZ_NPOH01000016.1 Protein Homology CDS 81780 82337 . + 0 ID=cds-WP_000828296.1;Parent=gene-CCO46_RS18155;Dbxref=GenBank:WP_000828296.1;Name=WP_000828296.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=CCO46_RS18155;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828296.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 82334 83377 . + . ID=gene-CCO46_RS18160;Name=CCO46_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18160;old_locus_tag=CCO46_18140 NZ_NPOH01000016.1 Protein Homology CDS 82334 83377 . + 0 ID=cds-WP_097363427.1;Parent=gene-CCO46_RS18160;Dbxref=GenBank:WP_097363427.1;Name=WP_097363427.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=CCO46_RS18160;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_097363427.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 83499 84725 . + . ID=gene-CCO46_RS18165;Name=CCO46_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18165;old_locus_tag=CCO46_18145 NZ_NPOH01000016.1 Protein Homology CDS 83499 84725 . + 0 ID=cds-WP_094887758.1;Parent=gene-CCO46_RS18165;Dbxref=GenBank:WP_094887758.1;Name=WP_094887758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=CCO46_RS18165;product=DUF3748 domain-containing protein;protein_id=WP_094887758.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 84727 85059 . - . ID=gene-CCO46_RS18170;Name=CCO46_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18170;old_locus_tag=CCO46_18150 NZ_NPOH01000016.1 Protein Homology CDS 84727 85059 . - 0 ID=cds-WP_001581211.1;Parent=gene-CCO46_RS18170;Dbxref=GenBank:WP_001581211.1;Name=WP_001581211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=CCO46_RS18170;product=YceK/YidQ family lipoprotein;protein_id=WP_001581211.1;transl_table=11 NZ_NPOH01000016.1 cmsearch sequence_feature 85302 85375 . + . ID=id-NZ_NPOH01000016.1:85302..85375;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPOH01000016.1 RefSeq gene 85369 85782 . + . ID=gene-CCO46_RS18175;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=CCO46_RS18175;old_locus_tag=CCO46_18155 NZ_NPOH01000016.1 Protein Homology CDS 85369 85782 . + 0 ID=cds-WP_001532742.1;Parent=gene-CCO46_RS18175;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=CCO46_RS18175;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 85892 86320 . + . ID=gene-CCO46_RS18180;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=CCO46_RS18180;old_locus_tag=CCO46_18160 NZ_NPOH01000016.1 Protein Homology CDS 85892 86320 . + 0 ID=cds-WP_001246918.1;Parent=gene-CCO46_RS18180;Dbxref=GenBank:WP_001246918.1;Name=WP_001246918.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=CCO46_RS18180;product=small heat shock chaperone IbpB;protein_id=WP_001246918.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 86509 88170 . + . ID=gene-CCO46_RS18185;Name=CCO46_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18185;old_locus_tag=CCO46_18165 NZ_NPOH01000016.1 Protein Homology CDS 86509 88170 . + 0 ID=cds-WP_001279793.1;Parent=gene-CCO46_RS18185;Dbxref=GenBank:WP_001279793.1;Name=WP_001279793.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=CCO46_RS18185;product=putative transporter;protein_id=WP_001279793.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 88613 88960 . + . ID=gene-CCO46_RS18190;Name=CCO46_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18190;old_locus_tag=CCO46_18170 NZ_NPOH01000016.1 Protein Homology CDS 88613 88960 . + 0 ID=cds-WP_000703964.1;Parent=gene-CCO46_RS18190;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=CCO46_RS18190;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 88950 89312 . + . ID=gene-CCO46_RS18195;Name=CCO46_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18195;old_locus_tag=CCO46_18175 NZ_NPOH01000016.1 Protein Homology CDS 88950 89312 . + 0 ID=cds-WP_001113454.1;Parent=gene-CCO46_RS18195;Dbxref=GenBank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=CCO46_RS18195;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 89309 89839 . + . ID=gene-CCO46_RS18200;Name=CCO46_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18200;old_locus_tag=CCO46_18180 NZ_NPOH01000016.1 Protein Homology CDS 89309 89839 . + 0 ID=cds-WP_094887759.1;Parent=gene-CCO46_RS18200;Dbxref=GenBank:WP_094887759.1;Name=WP_094887759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=CCO46_RS18200;product=radical SAM protein;protein_id=WP_094887759.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 89921 91243 . - . ID=gene-CCO46_RS18205;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=CCO46_RS18205;old_locus_tag=CCO46_18185 NZ_NPOH01000016.1 Protein Homology CDS 89921 91243 . - 0 ID=cds-WP_023217888.1;Parent=gene-CCO46_RS18205;Dbxref=GenBank:WP_023217888.1;Name=WP_023217888.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=CCO46_RS18205;product=D-serine ammonia-lyase;protein_id=WP_023217888.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 91261 92598 . - . ID=gene-CCO46_RS18210;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=CCO46_RS18210;old_locus_tag=CCO46_18190 NZ_NPOH01000016.1 Protein Homology CDS 91261 92598 . - 0 ID=cds-WP_000543314.1;Parent=gene-CCO46_RS18210;Dbxref=GenBank:WP_000543314.1;Name=WP_000543314.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=CCO46_RS18210;product=D-serine transporter DsdX;protein_id=WP_000543314.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 92824 93747 . + . ID=gene-CCO46_RS18215;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=CCO46_RS18215;old_locus_tag=CCO46_18195 NZ_NPOH01000016.1 Protein Homology CDS 92824 93747 . + 0 ID=cds-WP_094887770.1;Parent=gene-CCO46_RS18215;Dbxref=GenBank:WP_094887770.1;Name=WP_094887770.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=CCO46_RS18215;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_094887770.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 93811 94896 . + . ID=gene-CCO46_RS18220;Name=CCO46_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18220;old_locus_tag=CCO46_18200 NZ_NPOH01000016.1 Protein Homology CDS 93811 94896 . + 0 ID=cds-WP_024146106.1;Parent=gene-CCO46_RS18220;Dbxref=GenBank:WP_024146106.1;Name=WP_024146106.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=CCO46_RS18220;product=cellulase family glycosylhydrolase;protein_id=WP_024146106.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 94823 96007 . - . ID=gene-CCO46_RS18225;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=CCO46_RS18225;old_locus_tag=CCO46_18205 NZ_NPOH01000016.1 Protein Homology CDS 94823 96007 . - 0 ID=cds-WP_000828744.1;Parent=gene-CCO46_RS18225;Dbxref=GenBank:WP_000828744.1;Name=WP_000828744.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=CCO46_RS18225;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828744.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 96210 97070 . - . ID=gene-CCO46_RS18230;Name=CCO46_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18230;old_locus_tag=CCO46_18210 NZ_NPOH01000016.1 Protein Homology CDS 96210 97070 . - 0 ID=cds-WP_001531658.1;Parent=gene-CCO46_RS18230;Dbxref=GenBank:WP_001531658.1;Name=WP_001531658.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=CCO46_RS18230;product=DMT family transporter;protein_id=WP_001531658.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 97163 97252 . - . ID=gene-CCO46_RS18235;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=CCO46_RS18235;old_locus_tag=CCO46_18215 NZ_NPOH01000016.1 Protein Homology CDS 97163 97252 . - 0 ID=cds-WP_000117642.1;Parent=gene-CCO46_RS18235;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=CCO46_RS18235;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11 NZ_NPOH01000016.1 RefSeq pseudogene 97249 97363 . - . ID=gene-CCO46_RS24990;Name=CCO46_RS24990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24990;pseudo=true NZ_NPOH01000016.1 Protein Homology CDS 97249 97363 . - 0 ID=cds-CCO46_RS24990;Parent=gene-CCO46_RS24990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=CCO46_RS24990;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 97886 97984 . + . ID=gene-CCO46_RS18245;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=CCO46_RS18245;old_locus_tag=CCO46_18225 NZ_NPOH01000016.1 Protein Homology CDS 97886 97984 . + 0 ID=cds-WP_001541152.1;Parent=gene-CCO46_RS18245;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=CCO46_RS18245;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 98091 99779 . + . ID=gene-CCO46_RS18250;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CCO46_RS18250;old_locus_tag=CCO46_18230 NZ_NPOH01000016.1 Protein Homology CDS 98091 99779 . + 0 ID=cds-WP_023217889.1;Parent=gene-CCO46_RS18250;Dbxref=GenBank:WP_023217889.1;Name=WP_023217889.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=CCO46_RS18250;product=acetolactate synthase large subunit;protein_id=WP_023217889.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 99783 100073 . + . ID=gene-CCO46_RS18255;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO46_RS18255;old_locus_tag=CCO46_18235 NZ_NPOH01000016.1 Protein Homology CDS 99783 100073 . + 0 ID=cds-WP_001171826.1;Parent=gene-CCO46_RS18255;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=CCO46_RS18255;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 100075 100860 . - . ID=gene-CCO46_RS18260;Name=CCO46_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18260;old_locus_tag=CCO46_18240 NZ_NPOH01000016.1 Protein Homology CDS 100075 100860 . - 0 ID=cds-WP_000448638.1;Parent=gene-CCO46_RS18260;Dbxref=GenBank:WP_000448638.1;Name=WP_000448638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=CCO46_RS18260;product=DeoR family transcriptional regulator;protein_id=WP_000448638.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 101185 102105 . + . ID=gene-CCO46_RS18265;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO46_RS18265;old_locus_tag=CCO46_18245 NZ_NPOH01000016.1 Protein Homology CDS 101185 102105 . + 0 ID=cds-WP_000350272.1;Parent=gene-CCO46_RS18265;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=CCO46_RS18265;product=ribokinase;protein_id=WP_000350272.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 102136 103452 . + . ID=gene-CCO46_RS18270;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO46_RS18270;old_locus_tag=CCO46_18250 NZ_NPOH01000016.1 Protein Homology CDS 102136 103452 . + 0 ID=cds-WP_000998359.1;Parent=gene-CCO46_RS18270;Dbxref=GenBank:WP_000998359.1;Name=WP_000998359.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=CCO46_RS18270;product=L-fucose:H+ symporter permease;protein_id=WP_000998359.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 103464 104477 . + . ID=gene-CCO46_RS18275;Name=CCO46_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18275;old_locus_tag=CCO46_18255 NZ_NPOH01000016.1 Protein Homology CDS 103464 104477 . + 0 ID=cds-WP_001533839.1;Parent=gene-CCO46_RS18275;Dbxref=GenBank:WP_001533839.1;Name=WP_001533839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=CCO46_RS18275;product=aldose 1-epimerase family protein;protein_id=WP_001533839.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 104631 105221 . + . ID=gene-CCO46_RS18280;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=CCO46_RS18280;old_locus_tag=CCO46_18260 NZ_NPOH01000016.1 Protein Homology CDS 104631 105221 . + 0 ID=cds-WP_000633672.1;Parent=gene-CCO46_RS18280;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=CCO46_RS18280;product=transcriptional regulator UhpA;protein_id=WP_000633672.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 105221 106723 . + . ID=gene-CCO46_RS18285;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=CCO46_RS18285;old_locus_tag=CCO46_18265 NZ_NPOH01000016.1 Protein Homology CDS 105221 106723 . + 0 ID=cds-WP_080203807.1;Parent=gene-CCO46_RS18285;Dbxref=GenBank:WP_080203807.1;Name=WP_080203807.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=CCO46_RS18285;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_080203807.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 106733 108061 . + . ID=gene-CCO46_RS18290;Name=CCO46_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18290;old_locus_tag=CCO46_18270 NZ_NPOH01000016.1 Protein Homology CDS 106733 108061 . + 0 ID=cds-WP_023181590.1;Parent=gene-CCO46_RS18290;Dbxref=GenBank:WP_023181590.1;Name=WP_023181590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=CCO46_RS18290;product=MFS transporter;protein_id=WP_023181590.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 108204 109595 . + . ID=gene-CCO46_RS18295;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CCO46_RS18295;old_locus_tag=CCO46_18275 NZ_NPOH01000016.1 Protein Homology CDS 108204 109595 . + 0 ID=cds-WP_000879181.1;Parent=gene-CCO46_RS18295;Dbxref=GenBank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=CCO46_RS18295;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879181.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 109788 110240 . + . ID=gene-CCO46_RS18300;Name=CCO46_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18300;old_locus_tag=CCO46_18280 NZ_NPOH01000016.1 Protein Homology CDS 109788 110240 . + 0 ID=cds-WP_001519640.1;Parent=gene-CCO46_RS18300;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=CCO46_RS18300;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 110673 110996 . - . ID=gene-CCO46_RS18305;Name=CCO46_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18305;old_locus_tag=CCO46_18285 NZ_NPOH01000016.1 Protein Homology CDS 110673 110996 . - 0 ID=cds-WP_001274844.1;Parent=gene-CCO46_RS18305;Dbxref=GenBank:WP_001274844.1;Name=WP_001274844.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=CCO46_RS18305;product=helix-turn-helix domain-containing protein;protein_id=WP_001274844.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 110980 111339 . - . ID=gene-CCO46_RS18310;Name=CCO46_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18310;old_locus_tag=CCO46_18290 NZ_NPOH01000016.1 Protein Homology CDS 110980 111339 . - 0 ID=cds-WP_001217953.1;Parent=gene-CCO46_RS18310;Dbxref=GenBank:WP_001217953.1;Name=WP_001217953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=CCO46_RS18310;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001217953.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 111555 112748 . + . ID=gene-CCO46_RS18315;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=CCO46_RS18315;old_locus_tag=CCO46_18295 NZ_NPOH01000016.1 Protein Homology CDS 111555 112748 . + 0 ID=cds-WP_001004798.1;Parent=gene-CCO46_RS18315;Dbxref=GenBank:WP_001004798.1;Name=WP_001004798.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=CCO46_RS18315;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004798.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 112807 114189 . - . ID=gene-CCO46_RS18320;Name=CCO46_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18320;old_locus_tag=CCO46_18300 NZ_NPOH01000016.1 Protein Homology CDS 112807 114189 . - 0 ID=cds-WP_097363428.1;Parent=gene-CCO46_RS18320;Dbxref=GenBank:WP_097363428.1;Name=WP_097363428.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=CCO46_RS18320;product=glycoside hydrolase family 1 protein;protein_id=WP_097363428.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 114295 114588 . - . ID=gene-CCO46_RS18325;Name=CCO46_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18325;old_locus_tag=CCO46_18305 NZ_NPOH01000016.1 Protein Homology CDS 114295 114588 . - 0 ID=cds-WP_000824212.1;Parent=gene-CCO46_RS18325;Dbxref=GenBank:WP_000824212.1;Name=WP_000824212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=CCO46_RS18325;product=YicS family protein;protein_id=WP_000824212.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 114785 117583 . + . ID=gene-CCO46_RS18330;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=CCO46_RS18330;old_locus_tag=CCO46_18310 NZ_NPOH01000016.1 Protein Homology CDS 114785 117583 . + 0 ID=cds-WP_097363429.1;Parent=gene-CCO46_RS18330;Dbxref=GenBank:WP_097363429.1;Name=WP_097363429.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=CCO46_RS18330;product=transcriptional regulator DagR;protein_id=WP_097363429.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 117802 118227 . + . ID=gene-CCO46_RS18335;Name=CCO46_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18335;old_locus_tag=CCO46_18315 NZ_NPOH01000016.1 Protein Homology CDS 117802 118227 . + 0 ID=cds-WP_000214106.1;Parent=gene-CCO46_RS18335;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=CCO46_RS18335;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 118238 118723 . + . ID=gene-CCO46_RS18340;Name=CCO46_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18340;old_locus_tag=CCO46_18320 NZ_NPOH01000016.1 Protein Homology CDS 118238 118723 . + 0 ID=cds-WP_001284295.1;Parent=gene-CCO46_RS18340;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=CCO46_RS18340;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 118869 119618 . + . ID=gene-CCO46_RS18345;Name=CCO46_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18345;old_locus_tag=CCO46_18325 NZ_NPOH01000016.1 Protein Homology CDS 118869 119618 . + 0 ID=cds-WP_000380259.1;Parent=gene-CCO46_RS18345;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=CCO46_RS18345;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 119615 120475 . + . ID=gene-CCO46_RS18350;Name=CCO46_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18350;old_locus_tag=CCO46_18330 NZ_NPOH01000016.1 Protein Homology CDS 119615 120475 . + 0 ID=cds-WP_001526325.1;Parent=gene-CCO46_RS18350;Dbxref=GenBank:WP_001526325.1;Name=WP_001526325.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=CCO46_RS18350;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001526325.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 120479 121588 . + . ID=gene-CCO46_RS18355;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=CCO46_RS18355;old_locus_tag=CCO46_18335 NZ_NPOH01000016.1 Protein Homology CDS 120479 121588 . + 0 ID=cds-WP_076935907.1;Parent=gene-CCO46_RS18355;Dbxref=GenBank:WP_076935907.1;Name=WP_076935907.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=CCO46_RS18355;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_076935907.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 121575 122318 . + . ID=gene-CCO46_RS18360;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO46_RS18360;old_locus_tag=CCO46_18340 NZ_NPOH01000016.1 Protein Homology CDS 121575 122318 . + 0 ID=cds-WP_001186146.1;Parent=gene-CCO46_RS18360;Dbxref=GenBank:WP_001186146.1;Name=WP_001186146.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=CCO46_RS18360;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186146.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 122554 123495 . + . ID=gene-CCO46_RS18365;Name=CCO46_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18365;old_locus_tag=CCO46_18345 NZ_NPOH01000016.1 Protein Homology CDS 122554 123495 . + 0 ID=cds-WP_080108886.1;Parent=gene-CCO46_RS18365;Dbxref=GenBank:WP_080108886.1;Name=WP_080108886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=CCO46_RS18365;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_080108886.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 123538 124440 . - . ID=gene-CCO46_RS18370;Name=CCO46_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18370;old_locus_tag=CCO46_18350 NZ_NPOH01000016.1 Protein Homology CDS 123538 124440 . - 0 ID=cds-WP_000535970.1;Parent=gene-CCO46_RS18370;Dbxref=GenBank:WP_000535970.1;Name=WP_000535970.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=CCO46_RS18370;product=EamA family transporter;protein_id=WP_000535970.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 124947 125642 . + . ID=gene-CCO46_RS18375;Name=CCO46_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18375;old_locus_tag=CCO46_18355 NZ_NPOH01000016.1 Protein Homology CDS 124947 125642 . + 0 ID=cds-WP_000392699.1;Parent=gene-CCO46_RS18375;Dbxref=GenBank:WP_000392699.1;Name=WP_000392699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=CCO46_RS18375;product=MgtC family protein;protein_id=WP_000392699.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 125862 128588 . + . ID=gene-CCO46_RS18380;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO46_RS18380;old_locus_tag=CCO46_18360 NZ_NPOH01000016.1 Protein Homology CDS 125862 128588 . + 0 ID=cds-WP_094887762.1;Parent=gene-CCO46_RS18380;Dbxref=GenBank:WP_094887762.1;Name=WP_094887762.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=CCO46_RS18380;product=magnesium-translocating P-type ATPase;protein_id=WP_094887762.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 128610 128702 . + . ID=gene-CCO46_RS18385;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=CCO46_RS18385;old_locus_tag=CCO46_18365 NZ_NPOH01000016.1 Protein Homology CDS 128610 128702 . + 0 ID=cds-WP_001082117.1;Parent=gene-CCO46_RS18385;Dbxref=GenBank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=CCO46_RS18385;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 128715 128801 . + . ID=gene-CCO46_RS25670;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=CCO46_RS25670 NZ_NPOH01000016.1 Protein Homology CDS 128715 128801 . + 0 ID=cds-WP_252515021.1;Parent=gene-CCO46_RS25670;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=CCO46_RS25670;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11 NZ_NPOH01000016.1 RefSeq gene 128903 129382 . + . ID=gene-CCO46_RS18390;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=CCO46_RS18390;old_locus_tag=CCO46_18370 NZ_NPOH01000016.1 Protein Homology CDS 128903 129382 . + 0 ID=cds-WP_001065324.1;Parent=gene-CCO46_RS18390;Dbxref=GenBank:WP_001065324.1;Name=WP_001065324.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=CCO46_RS18390;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065324.1;transl_table=11 ##sequence-region NZ_NPOH01000017.1 1 110895 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000017.1 RefSeq region 1 110895 . + . ID=NZ_NPOH01000017.1:1..110895;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000017.1 RefSeq gene 957 1895 . + . ID=gene-CCO46_RS18410;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=CCO46_RS18410;old_locus_tag=CCO46_18390 NZ_NPOH01000017.1 Protein Homology CDS 957 1895 . + 0 ID=cds-WP_001094907.1;Parent=gene-CCO46_RS18410;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=CCO46_RS18410;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 1993 2982 . + . ID=gene-CCO46_RS18415;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CCO46_RS18415;old_locus_tag=CCO46_18395 NZ_NPOH01000017.1 Protein Homology CDS 1993 2982 . + 0 ID=cds-WP_097363430.1;Parent=gene-CCO46_RS18415;Dbxref=GenBank:WP_097363430.1;Name=WP_097363430.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=CCO46_RS18415;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_097363430.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 3003 4334 . + . ID=gene-CCO46_RS18420;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=CCO46_RS18420;old_locus_tag=CCO46_18400 NZ_NPOH01000017.1 Protein Homology CDS 3003 4334 . + 0 ID=cds-WP_000108129.1;Parent=gene-CCO46_RS18420;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=CCO46_RS18420;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 4401 5609 . + . ID=gene-CCO46_RS18425;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=CCO46_RS18425;old_locus_tag=CCO46_18405 NZ_NPOH01000017.1 Protein Homology CDS 4401 5609 . + 0 ID=cds-WP_001001855.1;Parent=gene-CCO46_RS18425;Dbxref=GenBank:WP_001001855.1;Name=WP_001001855.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=CCO46_RS18425;product=propionate kinase;protein_id=WP_001001855.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 5643 7937 . + . ID=gene-CCO46_RS18430;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO46_RS18430;old_locus_tag=CCO46_18410 NZ_NPOH01000017.1 Protein Homology CDS 5643 7937 . + 0 ID=cds-WP_000867323.1;Parent=gene-CCO46_RS18430;Dbxref=GenBank:WP_000867323.1;Name=WP_000867323.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=CCO46_RS18430;product=formate C-acetyltransferase;protein_id=WP_000867323.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 8007 9371 . + . ID=gene-CCO46_RS18435;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=CCO46_RS18435;old_locus_tag=CCO46_18415 NZ_NPOH01000017.1 Protein Homology CDS 8007 9371 . + 0 ID=cds-WP_000622086.1;Parent=gene-CCO46_RS18435;Dbxref=GenBank:WP_000622086.1;Name=WP_000622086.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=CCO46_RS18435;product=L-serine ammonia-lyase;protein_id=WP_000622086.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 9686 11017 . + . ID=gene-CCO46_RS18440;Name=CCO46_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18440;old_locus_tag=CCO46_18420 NZ_NPOH01000017.1 Protein Homology CDS 9686 11017 . + 0 ID=cds-WP_000443187.1;Parent=gene-CCO46_RS18440;Dbxref=GenBank:WP_000443187.1;Name=WP_000443187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=CCO46_RS18440;product=amino acid permease;protein_id=WP_000443187.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 11043 12353 . + . ID=gene-CCO46_RS18445;Name=CCO46_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18445;old_locus_tag=CCO46_18425 NZ_NPOH01000017.1 Protein Homology CDS 11043 12353 . + 0 ID=cds-WP_000463070.1;Parent=gene-CCO46_RS18445;Dbxref=GenBank:WP_000463070.1;Name=WP_000463070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=CCO46_RS18445;product=serine dehydratase subunit alpha family protein;protein_id=WP_000463070.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 12466 12630 . - . ID=gene-CCO46_RS18450;Name=CCO46_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18450;old_locus_tag=CCO46_18430 NZ_NPOH01000017.1 Protein Homology CDS 12466 12630 . - 0 ID=cds-WP_000039327.1;Parent=gene-CCO46_RS18450;Dbxref=GenBank:WP_000039327.1;Name=WP_000039327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=CCO46_RS18450;product=hypothetical protein;protein_id=WP_000039327.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 12654 13355 . - . ID=gene-CCO46_RS18455;Name=CCO46_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18455;old_locus_tag=CCO46_18435 NZ_NPOH01000017.1 Protein Homology CDS 12654 13355 . - 0 ID=cds-WP_000633554.1;Parent=gene-CCO46_RS18455;Dbxref=GenBank:WP_000633554.1;Name=WP_000633554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=CCO46_RS18455;product=pirin family protein;protein_id=WP_000633554.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 13460 14356 . + . ID=gene-CCO46_RS18460;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=CCO46_RS18460;old_locus_tag=CCO46_18440 NZ_NPOH01000017.1 Protein Homology CDS 13460 14356 . + 0 ID=cds-WP_001041026.1;Parent=gene-CCO46_RS18460;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=CCO46_RS18460;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 14395 14760 . - . ID=gene-CCO46_RS18465;Name=CCO46_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18465;old_locus_tag=CCO46_18445 NZ_NPOH01000017.1 Protein Homology CDS 14395 14760 . - 0 ID=cds-WP_000384139.1;Parent=gene-CCO46_RS18465;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=CCO46_RS18465;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 14884 15870 . - . ID=gene-CCO46_RS18470;Name=CCO46_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18470;old_locus_tag=CCO46_18450 NZ_NPOH01000017.1 Protein Homology CDS 14884 15870 . - 0 ID=cds-WP_071054303.1;Parent=gene-CCO46_RS18470;Dbxref=GenBank:WP_071054303.1;Name=WP_071054303.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=CCO46_RS18470;product=glutathione S-transferase family protein;protein_id=WP_071054303.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 15938 16330 . - . ID=gene-CCO46_RS18475;Name=CCO46_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18475;old_locus_tag=CCO46_18455 NZ_NPOH01000017.1 Protein Homology CDS 15938 16330 . - 0 ID=cds-WP_001592732.1;Parent=gene-CCO46_RS18475;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=CCO46_RS18475;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 16578 16877 . - . ID=gene-CCO46_RS18480;Name=CCO46_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18480;old_locus_tag=CCO46_18460 NZ_NPOH01000017.1 Protein Homology CDS 16578 16877 . - 0 ID=cds-WP_000095496.1;Parent=gene-CCO46_RS18480;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=CCO46_RS18480;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 16874 17272 . - . ID=gene-CCO46_RS18485;Name=CCO46_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18485;old_locus_tag=CCO46_18465 NZ_NPOH01000017.1 Protein Homology CDS 16874 17272 . - 0 ID=cds-WP_000785626.1;Parent=gene-CCO46_RS18485;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=CCO46_RS18485;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 17275 17580 . - . ID=gene-CCO46_RS18490;Name=CCO46_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18490;old_locus_tag=CCO46_18470 NZ_NPOH01000017.1 Protein Homology CDS 17275 17580 . - 0 ID=cds-WP_000031219.1;Parent=gene-CCO46_RS18490;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=CCO46_RS18490;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 17622 17990 . - . ID=gene-CCO46_RS18495;Name=CCO46_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18495;old_locus_tag=CCO46_18475 NZ_NPOH01000017.1 Protein Homology CDS 17622 17990 . - 0 ID=cds-WP_000877297.1;Parent=gene-CCO46_RS18495;Dbxref=GenBank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=CCO46_RS18495;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 18135 18518 . - . ID=gene-CCO46_RS18500;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=CCO46_RS18500;old_locus_tag=CCO46_18480 NZ_NPOH01000017.1 Protein Homology CDS 18135 18518 . - 0 ID=cds-WP_000917516.1;Parent=gene-CCO46_RS18500;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=CCO46_RS18500;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 18522 19184 . - . ID=gene-CCO46_RS18505;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=CCO46_RS18505;old_locus_tag=CCO46_18485 NZ_NPOH01000017.1 Protein Homology CDS 18522 19184 . - 0 ID=cds-WP_000422141.1;Parent=gene-CCO46_RS18505;Dbxref=GenBank:WP_000422141.1;Name=WP_000422141.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=CCO46_RS18505;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422141.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 19634 20878 . - . ID=gene-CCO46_RS18515;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=CCO46_RS18515;old_locus_tag=CCO46_18495 NZ_NPOH01000017.1 Protein Homology CDS 19634 20878 . - 0 ID=cds-WP_000235363.1;Parent=gene-CCO46_RS18515;Dbxref=GenBank:WP_000235363.1;Name=WP_000235363.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=CCO46_RS18515;product=serine/threonine transporter SstT;protein_id=WP_000235363.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 21133 22101 . - . ID=gene-CCO46_RS18520;Name=CCO46_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18520;old_locus_tag=CCO46_18500 NZ_NPOH01000017.1 Protein Homology CDS 21133 22101 . - 0 ID=cds-WP_001098833.1;Parent=gene-CCO46_RS18520;Dbxref=GenBank:WP_001098833.1;Name=WP_001098833.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=CCO46_RS18520;product=TerC family protein;protein_id=WP_001098833.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 22371 23369 . - . ID=gene-CCO46_RS18525;Name=CCO46_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18525;old_locus_tag=CCO46_18505 NZ_NPOH01000017.1 Protein Homology CDS 22371 23369 . - 0 ID=cds-WP_080203149.1;Parent=gene-CCO46_RS18525;Dbxref=GenBank:WP_080203149.1;Name=WP_080203149.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=CCO46_RS18525;product=Gfo/Idh/MocA family protein;protein_id=WP_080203149.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 23458 24150 . - . ID=gene-CCO46_RS18530;Name=CCO46_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18530;old_locus_tag=CCO46_18510 NZ_NPOH01000017.1 Protein Homology CDS 23458 24150 . - 0 ID=cds-WP_000951045.1;Parent=gene-CCO46_RS18530;Dbxref=GenBank:WP_000951045.1;Name=WP_000951045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=CCO46_RS18530;product=SanA/YdcF family protein;protein_id=WP_000951045.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 24301 24798 . - . ID=gene-CCO46_RS18535;Name=CCO46_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18535;old_locus_tag=CCO46_18515 NZ_NPOH01000017.1 Protein Homology CDS 24301 24798 . - 0 ID=cds-WP_000202966.1;Parent=gene-CCO46_RS18535;Dbxref=GenBank:WP_000202966.1;Name=WP_000202966.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=CCO46_RS18535;product=M48 family metallopeptidase;protein_id=WP_000202966.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 24884 26020 . + . ID=gene-CCO46_RS18540;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=CCO46_RS18540;old_locus_tag=CCO46_18520 NZ_NPOH01000017.1 Protein Homology CDS 24884 26020 . + 0 ID=cds-WP_000019985.1;Parent=gene-CCO46_RS18540;Dbxref=GenBank:WP_000019985.1;Name=WP_000019985.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=CCO46_RS18540;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019985.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 26101 28119 . - . ID=gene-CCO46_RS18545;Name=CCO46_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18545;old_locus_tag=CCO46_18525 NZ_NPOH01000017.1 Protein Homology CDS 26101 28119 . - 0 ID=cds-WP_097363431.1;Parent=gene-CCO46_RS18545;Dbxref=GenBank:WP_097363431.1;Name=WP_097363431.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=CCO46_RS18545;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_097363431.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 28290 29669 . - . ID=gene-CCO46_RS18550;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=CCO46_RS18550;old_locus_tag=CCO46_18530 NZ_NPOH01000017.1 Protein Homology CDS 28290 29669 . - 0 ID=cds-WP_097363432.1;Parent=gene-CCO46_RS18550;Dbxref=GenBank:WP_097363432.1;Name=WP_097363432.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=CCO46_RS18550;product=putrescine aminotransferase;protein_id=WP_097363432.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 30099 31619 . + . ID=gene-CCO46_RS18560;Name=CCO46_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18560;old_locus_tag=CCO46_18540 NZ_NPOH01000017.1 Protein Homology CDS 30099 31619 . + 0 ID=cds-WP_000094645.1;Parent=gene-CCO46_RS18560;Dbxref=GenBank:WP_000094645.1;Name=WP_000094645.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=CCO46_RS18560;product=methyl-accepting chemotaxis protein;protein_id=WP_000094645.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 32007 33572 . + . ID=gene-CCO46_RS18565;Name=CCO46_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18565;old_locus_tag=CCO46_18545 NZ_NPOH01000017.1 Protein Homology CDS 32007 33572 . + 0 ID=cds-WP_000478471.1;Parent=gene-CCO46_RS18565;Dbxref=GenBank:WP_000478471.1;Name=WP_000478471.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=CCO46_RS18565;product=methyl-accepting chemotaxis protein;protein_id=WP_000478471.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 33569 34216 . - . ID=gene-CCO46_RS18570;Name=CCO46_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18570;old_locus_tag=CCO46_18550 NZ_NPOH01000017.1 Protein Homology CDS 33569 34216 . - 0 ID=cds-WP_000983434.1;Parent=gene-CCO46_RS18570;Dbxref=GenBank:WP_000983434.1;Name=WP_000983434.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=CCO46_RS18570;product=PadR family transcriptional regulator;protein_id=WP_000983434.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 34448 35215 . + . ID=gene-CCO46_RS18575;Name=CCO46_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18575;old_locus_tag=CCO46_18555 NZ_NPOH01000017.1 Protein Homology CDS 34448 35215 . + 0 ID=cds-WP_000213761.1;Parent=gene-CCO46_RS18575;Dbxref=GenBank:WP_000213761.1;Name=WP_000213761.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=CCO46_RS18575;product=siderophore-interacting protein;protein_id=WP_000213761.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 35520 36947 . + . ID=gene-CCO46_RS18580;Name=CCO46_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18580;old_locus_tag=CCO46_18560 NZ_NPOH01000017.1 Protein Homology CDS 35520 36947 . + 0 ID=cds-WP_097363448.1;Parent=gene-CCO46_RS18580;Dbxref=GenBank:WP_097363448.1;Name=WP_097363448.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000765559.1;locus_tag=CCO46_RS18580;product=tyrosine-type recombinase/integrase;protein_id=WP_097363448.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 36944 37546 . + . ID=gene-CCO46_RS18585;Name=CCO46_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18585;old_locus_tag=CCO46_18565 NZ_NPOH01000017.1 GeneMarkS-2+ CDS 36944 37546 . + 0 ID=cds-WP_097363433.1;Parent=gene-CCO46_RS18585;Dbxref=GenBank:WP_097363433.1;Name=WP_097363433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS18585;product=hypothetical protein;protein_id=WP_097363433.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 37682 37891 . + . ID=gene-CCO46_RS18590;Name=CCO46_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18590;old_locus_tag=CCO46_18570 NZ_NPOH01000017.1 Protein Homology CDS 37682 37891 . + 0 ID=cds-WP_097363434.1;Parent=gene-CCO46_RS18590;Dbxref=GenBank:WP_097363434.1;Name=WP_097363434.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103646.1;locus_tag=CCO46_RS18590;product=helix-turn-helix domain-containing protein;protein_id=WP_097363434.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 38456 38635 . - . ID=gene-CCO46_RS25545;Name=CCO46_RS25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25545;old_locus_tag=CCO46_18575 NZ_NPOH01000017.1 Protein Homology CDS 38456 38635 . - 0 ID=cds-WP_097363435.1;Parent=gene-CCO46_RS25545;Dbxref=GenBank:WP_097363435.1;Name=WP_097363435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103622.1;locus_tag=CCO46_RS25545;product=hypothetical protein;protein_id=WP_097363435.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 38766 39035 . + . ID=gene-CCO46_RS18600;Name=CCO46_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18600;old_locus_tag=CCO46_18580 NZ_NPOH01000017.1 Protein Homology CDS 38766 39035 . + 0 ID=cds-WP_097363436.1;Parent=gene-CCO46_RS18600;Dbxref=GenBank:WP_097363436.1;Name=WP_097363436.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033153.2;locus_tag=CCO46_RS18600;product=host cell division inhibitor Icd-like protein;protein_id=WP_097363436.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 39028 39240 . + . ID=gene-CCO46_RS18605;Name=CCO46_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18605;old_locus_tag=CCO46_18585 NZ_NPOH01000017.1 Protein Homology CDS 39028 39240 . + 0 ID=cds-WP_097363437.1;Parent=gene-CCO46_RS18605;Dbxref=GenBank:WP_097363437.1;Name=WP_097363437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178882.1;locus_tag=CCO46_RS18605;product=aminotransferase;protein_id=WP_097363437.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 39237 39605 . + . ID=gene-CCO46_RS18610;Name=CCO46_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18610;old_locus_tag=CCO46_18590 NZ_NPOH01000017.1 Protein Homology CDS 39237 39605 . + 0 ID=cds-WP_097363438.1;Parent=gene-CCO46_RS18610;Dbxref=GenBank:WP_097363438.1;Name=WP_097363438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229117.1;locus_tag=CCO46_RS18610;product=hypothetical protein;protein_id=WP_097363438.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 39602 41422 . + . ID=gene-CCO46_RS18615;Name=CCO46_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18615;old_locus_tag=CCO46_18595 NZ_NPOH01000017.1 Protein Homology CDS 39602 41422 . + 0 ID=cds-WP_097363439.1;Parent=gene-CCO46_RS18615;Dbxref=GenBank:WP_097363439.1;Name=WP_097363439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008320688.1;locus_tag=CCO46_RS18615;product=DNA primase family protein;protein_id=WP_097363439.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 42109 42303 . + . ID=gene-CCO46_RS18620;Name=CCO46_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18620;old_locus_tag=CCO46_18600 NZ_NPOH01000017.1 Protein Homology CDS 42109 42303 . + 0 ID=cds-WP_097363440.1;Parent=gene-CCO46_RS18620;Dbxref=GenBank:WP_097363440.1;Name=WP_097363440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846266.1;locus_tag=CCO46_RS18620;product=hypothetical protein;protein_id=WP_097363440.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 42300 44213 . + . ID=gene-CCO46_RS18625;Name=CCO46_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18625;old_locus_tag=CCO46_18605 NZ_NPOH01000017.1 Protein Homology CDS 42300 44213 . + 0 ID=cds-WP_097363441.1;Parent=gene-CCO46_RS18625;Dbxref=GenBank:WP_097363441.1;Name=WP_097363441.1;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017076.1;locus_tag=CCO46_RS18625;product=ClpP-like prohead protease/major capsid protein fusion protein;protein_id=WP_097363441.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 44427 44618 . + . ID=gene-CCO46_RS18630;Name=CCO46_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18630;old_locus_tag=CCO46_18610 NZ_NPOH01000017.1 GeneMarkS-2+ CDS 44427 44618 . + 0 ID=cds-WP_140439317.1;Parent=gene-CCO46_RS18630;Dbxref=GenBank:WP_140439317.1;Name=WP_140439317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS18630;product=DUF1441 family protein;protein_id=WP_140439317.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 44605 45204 . + . ID=gene-CCO46_RS18635;Name=CCO46_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18635;old_locus_tag=CCO46_18615 NZ_NPOH01000017.1 Protein Homology CDS 44605 45204 . + 0 ID=cds-WP_097363443.1;Parent=gene-CCO46_RS18635;Dbxref=GenBank:WP_097363443.1;Name=WP_097363443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025233.1;locus_tag=CCO46_RS18635;product=tail assembly protein;protein_id=WP_097363443.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 45273 46061 . - . ID=gene-CCO46_RS18640;Name=CCO46_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18640;old_locus_tag=CCO46_18620 NZ_NPOH01000017.1 Protein Homology CDS 45273 46061 . - 0 ID=cds-WP_097363444.1;Parent=gene-CCO46_RS18640;Dbxref=GenBank:WP_097363444.1;Name=WP_097363444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096236.1;locus_tag=CCO46_RS18640;product=hypothetical protein;protein_id=WP_097363444.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 46487 46562 . - . ID=gene-CCO46_RS18645;Name=CCO46_RS18645;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS18645;old_locus_tag=CCO46_18625 NZ_NPOH01000017.1 tRNAscan-SE tRNA 46487 46562 . - . ID=rna-CCO46_RS18645;Parent=gene-CCO46_RS18645;anticodon=(pos:complement(46527..46529));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS18645;product=tRNA-Ile NZ_NPOH01000017.1 tRNAscan-SE exon 46487 46562 . - . ID=exon-CCO46_RS18645-1;Parent=rna-CCO46_RS18645;anticodon=(pos:complement(46527..46529));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS18645;product=tRNA-Ile NZ_NPOH01000017.1 RefSeq gene 46688 47194 . + . ID=gene-CCO46_RS18650;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=CCO46_RS18650;old_locus_tag=CCO46_18630 NZ_NPOH01000017.1 Protein Homology CDS 46688 47194 . + 0 ID=cds-WP_000237776.1;Parent=gene-CCO46_RS18650;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=CCO46_RS18650;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 47318 49300 . - . ID=gene-CCO46_RS18655;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CCO46_RS18655;old_locus_tag=CCO46_18635 NZ_NPOH01000017.1 Protein Homology CDS 47318 49300 . - 0 ID=cds-WP_001120159.1;Parent=gene-CCO46_RS18655;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=CCO46_RS18655;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 49315 51060 . - . ID=gene-CCO46_RS18660;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CCO46_RS18660;old_locus_tag=CCO46_18640 NZ_NPOH01000017.1 Protein Homology CDS 49315 51060 . - 0 ID=cds-WP_000918865.1;Parent=gene-CCO46_RS18660;Dbxref=GenBank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=CCO46_RS18660;product=DNA primase;protein_id=WP_000918865.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 51296 51511 . - . ID=gene-CCO46_RS18665;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CCO46_RS18665;old_locus_tag=CCO46_18645 NZ_NPOH01000017.1 Protein Homology CDS 51296 51511 . - 0 ID=cds-WP_001144069.1;Parent=gene-CCO46_RS18665;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=CCO46_RS18665;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 51739 52752 . + . ID=gene-CCO46_RS18675;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CCO46_RS18675;old_locus_tag=CCO46_18655 NZ_NPOH01000017.1 Protein Homology CDS 51739 52752 . + 0 ID=cds-WP_001264391.1;Parent=gene-CCO46_RS18675;Dbxref=GenBank:WP_001264391.1;Name=WP_001264391.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=CCO46_RS18675;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264391.1;transl_table=11 NZ_NPOH01000017.1 RefSeq pseudogene 52875 53018 . - . ID=gene-CCO46_RS25000;Name=CCO46_RS25000;end_range=53018,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25000;partial=true;pseudo=true;start_range=.,52875 NZ_NPOH01000017.1 Protein Homology CDS 52875 53018 . - 0 ID=cds-CCO46_RS25000;Parent=gene-CCO46_RS25000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=53018,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=CCO46_RS25000;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,52875;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 53002 53613 . - . ID=gene-CCO46_RS18685;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CCO46_RS18685;old_locus_tag=CCO46_18665 NZ_NPOH01000017.1 Protein Homology CDS 53002 53613 . - 0 ID=cds-WP_001272784.1;Parent=gene-CCO46_RS18685;Dbxref=GenBank:WP_001272784.1;Name=WP_001272784.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=CCO46_RS18685;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 53720 54079 . + . ID=gene-CCO46_RS18690;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CCO46_RS18690;old_locus_tag=CCO46_18670 NZ_NPOH01000017.1 Protein Homology CDS 53720 54079 . + 0 ID=cds-WP_000355776.1;Parent=gene-CCO46_RS18690;Dbxref=GenBank:WP_000355776.1;Name=WP_000355776.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=CCO46_RS18690;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_000355776.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 54177 54998 . + . ID=gene-CCO46_RS18695;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=CCO46_RS18695;old_locus_tag=CCO46_18675 NZ_NPOH01000017.1 Protein Homology CDS 54177 54998 . + 0 ID=cds-WP_001281933.1;Parent=gene-CCO46_RS18695;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=CCO46_RS18695;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 55103 56344 . - . ID=gene-CCO46_RS18700;Name=CCO46_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18700;old_locus_tag=CCO46_18680 NZ_NPOH01000017.1 Protein Homology CDS 55103 56344 . - 0 ID=cds-WP_000708447.1;Parent=gene-CCO46_RS18700;Dbxref=GenBank:WP_000708447.1;Name=WP_000708447.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=CCO46_RS18700;product=multifunctional CCA addition/repair protein;protein_id=WP_000708447.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 56407 57021 . - . ID=gene-CCO46_RS18705;Name=CCO46_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18705;old_locus_tag=CCO46_18685 NZ_NPOH01000017.1 Protein Homology CDS 56407 57021 . - 0 ID=cds-WP_001125341.1;Parent=gene-CCO46_RS18705;Dbxref=GenBank:WP_001125341.1;Name=WP_001125341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=CCO46_RS18705;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125341.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 57263 58564 . + . ID=gene-CCO46_RS18710;Name=CCO46_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18710;old_locus_tag=CCO46_18690 NZ_NPOH01000017.1 Protein Homology CDS 57263 58564 . + 0 ID=cds-WP_057519826.1;Parent=gene-CCO46_RS18710;Dbxref=GenBank:WP_057519826.1;Name=WP_057519826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=CCO46_RS18710;product=inorganic triphosphatase;protein_id=WP_057519826.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 58682 61525 . + . ID=gene-CCO46_RS18715;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=CCO46_RS18715;old_locus_tag=CCO46_18695 NZ_NPOH01000017.1 Protein Homology CDS 58682 61525 . + 0 ID=cds-WP_000188306.1;Parent=gene-CCO46_RS18715;Dbxref=GenBank:WP_000188306.1;Name=WP_000188306.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=CCO46_RS18715;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_000188306.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 61573 63006 . + . ID=gene-CCO46_RS18720;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=CCO46_RS18720;old_locus_tag=CCO46_18700 NZ_NPOH01000017.1 Protein Homology CDS 61573 63006 . + 0 ID=cds-WP_079943896.1;Parent=gene-CCO46_RS18720;Dbxref=GenBank:WP_079943896.1;Name=WP_079943896.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=CCO46_RS18720;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_079943896.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 63166 63225 . - . ID=gene-CCO46_RS25300;Name=CCO46_RS25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25300 NZ_NPOH01000017.1 Protein Homology CDS 63166 63225 . - 0 ID=cds-WP_001804776.1;Parent=gene-CCO46_RS25300;Dbxref=GenBank:WP_001804776.1;Name=WP_001804776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=CCO46_RS25300;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001804776.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 63465 65144 . - . ID=gene-CCO46_RS18730;Name=CCO46_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18730;old_locus_tag=CCO46_18710 NZ_NPOH01000017.1 Protein Homology CDS 63465 65144 . - 0 ID=cds-WP_000342878.1;Parent=gene-CCO46_RS18730;Dbxref=GenBank:WP_000342878.1;Name=WP_000342878.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=CCO46_RS18730;product=flotillin family protein;protein_id=WP_000342878.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 65163 65783 . - . ID=gene-CCO46_RS18735;Name=CCO46_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18735;old_locus_tag=CCO46_18715 NZ_NPOH01000017.1 Protein Homology CDS 65163 65783 . - 0 ID=cds-WP_079972869.1;Parent=gene-CCO46_RS18735;Dbxref=GenBank:WP_079972869.1;Name=WP_079972869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=CCO46_RS18735;product=OB-fold-containig protein;protein_id=WP_079972869.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 66041 66250 . + . ID=gene-CCO46_RS18740;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=CCO46_RS18740;old_locus_tag=CCO46_18720 NZ_NPOH01000017.1 Protein Homology CDS 66041 66250 . + 0 ID=cds-WP_000928927.1;Parent=gene-CCO46_RS18740;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=CCO46_RS18740;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 66325 66621 . - . ID=gene-CCO46_RS18745;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=CCO46_RS18745;old_locus_tag=CCO46_18725 NZ_NPOH01000017.1 Protein Homology CDS 66325 66621 . - 0 ID=cds-WP_000566824.1;Parent=gene-CCO46_RS18745;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=CCO46_RS18745;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11 NZ_NPOH01000017.1 cmsearch riboswitch 66754 66952 . + . ID=id-NZ_NPOH01000017.1:66754..66952;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPOH01000017.1 RefSeq gene 67058 67711 . + . ID=gene-CCO46_RS18750;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=CCO46_RS18750;old_locus_tag=CCO46_18730 NZ_NPOH01000017.1 Protein Homology CDS 67058 67711 . + 0 ID=cds-WP_001076978.1;Parent=gene-CCO46_RS18750;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=CCO46_RS18750;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 67882 68559 . - . ID=gene-CCO46_RS18755;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=CCO46_RS18755;old_locus_tag=CCO46_18735 NZ_NPOH01000017.1 Protein Homology CDS 67882 68559 . - 0 ID=cds-WP_000345576.1;Parent=gene-CCO46_RS18755;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=CCO46_RS18755;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 68574 69245 . - . ID=gene-CCO46_RS18760;Name=CCO46_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18760;old_locus_tag=CCO46_18740 NZ_NPOH01000017.1 Protein Homology CDS 68574 69245 . - 0 ID=cds-WP_000096232.1;Parent=gene-CCO46_RS18760;Dbxref=GenBank:WP_000096232.1;Name=WP_000096232.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=CCO46_RS18760;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096232.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 69265 71061 . - . ID=gene-CCO46_RS18765;Name=CCO46_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18765;old_locus_tag=CCO46_18745 NZ_NPOH01000017.1 Protein Homology CDS 69265 71061 . - 0 ID=cds-WP_097363445.1;Parent=gene-CCO46_RS18765;Dbxref=GenBank:WP_097363445.1;Name=WP_097363445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=CCO46_RS18765;product=aryl-sulfate sulfotransferase;protein_id=WP_097363445.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 71461 71637 . + . ID=gene-CCO46_RS25200;Name=CCO46_RS25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25200;old_locus_tag=CCO46_18750 NZ_NPOH01000017.1 Protein Homology CDS 71461 71637 . + 0 ID=cds-WP_000469259.1;Parent=gene-CCO46_RS25200;Dbxref=GenBank:WP_000469259.1;Name=WP_000469259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=CCO46_RS25200;product=hypothetical protein;protein_id=WP_000469259.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 71704 72477 . - . ID=gene-CCO46_RS18775;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=CCO46_RS18775;old_locus_tag=CCO46_18755 NZ_NPOH01000017.1 Protein Homology CDS 71704 72477 . - 0 ID=cds-WP_000115874.1;Parent=gene-CCO46_RS18775;Dbxref=GenBank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=CCO46_RS18775;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 72618 73406 . + . ID=gene-CCO46_RS18780;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=CCO46_RS18780;old_locus_tag=CCO46_18760 NZ_NPOH01000017.1 Protein Homology CDS 72618 73406 . + 0 ID=cds-WP_001520560.1;Parent=gene-CCO46_RS18780;Dbxref=GenBank:WP_001520560.1;Name=WP_001520560.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=CCO46_RS18780;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001520560.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 73467 74630 . - . ID=gene-CCO46_RS18785;Name=CCO46_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18785;old_locus_tag=CCO46_18765 NZ_NPOH01000017.1 Protein Homology CDS 73467 74630 . - 0 ID=cds-WP_097363446.1;Parent=gene-CCO46_RS18785;Dbxref=GenBank:WP_097363446.1;Name=WP_097363446.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=CCO46_RS18785;product=glutathionylspermidine synthase family protein;protein_id=WP_097363446.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 74636 75307 . - . ID=gene-CCO46_RS18790;Name=CCO46_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18790;old_locus_tag=CCO46_18770 NZ_NPOH01000017.1 Protein Homology CDS 74636 75307 . - 0 ID=cds-WP_000831528.1;Parent=gene-CCO46_RS18790;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=CCO46_RS18790;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 75520 76995 . - . ID=gene-CCO46_RS18800;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=CCO46_RS18800;old_locus_tag=CCO46_18780 NZ_NPOH01000017.1 Protein Homology CDS 75520 76995 . - 0 ID=cds-WP_001575014.1;Parent=gene-CCO46_RS18800;Dbxref=GenBank:WP_001575014.1;Name=WP_001575014.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=CCO46_RS18800;product=outer membrane channel protein TolC;protein_id=WP_001575014.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 77196 77828 . + . ID=gene-CCO46_RS18805;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=CCO46_RS18805;old_locus_tag=CCO46_18785 NZ_NPOH01000017.1 Protein Homology CDS 77196 77828 . + 0 ID=cds-WP_001231950.1;Parent=gene-CCO46_RS18805;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=CCO46_RS18805;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 77825 78247 . + . ID=gene-CCO46_RS18810;Name=CCO46_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18810;old_locus_tag=CCO46_18790 NZ_NPOH01000017.1 Protein Homology CDS 77825 78247 . + 0 ID=cds-WP_000833404.1;Parent=gene-CCO46_RS18810;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=CCO46_RS18810;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 78272 79099 . + . ID=gene-CCO46_RS18815;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=CCO46_RS18815;old_locus_tag=CCO46_18795 NZ_NPOH01000017.1 Protein Homology CDS 78272 79099 . + 0 ID=cds-WP_000444735.1;Parent=gene-CCO46_RS18815;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=CCO46_RS18815;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 79099 79680 . + . ID=gene-CCO46_RS18820;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=CCO46_RS18820;old_locus_tag=CCO46_18800 NZ_NPOH01000017.1 Protein Homology CDS 79099 79680 . + 0 ID=cds-WP_000105725.1;Parent=gene-CCO46_RS18820;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=CCO46_RS18820;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 79708 81600 . + . ID=gene-CCO46_RS18825;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CCO46_RS18825;old_locus_tag=CCO46_18805 NZ_NPOH01000017.1 Protein Homology CDS 79708 81600 . + 0 ID=cds-WP_000195318.1;Parent=gene-CCO46_RS18825;Dbxref=GenBank:WP_000195318.1;Name=WP_000195318.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=CCO46_RS18825;product=DNA topoisomerase IV subunit B;protein_id=WP_000195318.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 81725 82039 . - . ID=gene-CCO46_RS18830;Name=CCO46_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18830;old_locus_tag=CCO46_18810 NZ_NPOH01000017.1 Protein Homology CDS 81725 82039 . - 0 ID=cds-WP_000958587.1;Parent=gene-CCO46_RS18830;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=CCO46_RS18830;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 82071 82652 . - . ID=gene-CCO46_RS18835;Name=CCO46_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18835;old_locus_tag=CCO46_18815 NZ_NPOH01000017.1 Protein Homology CDS 82071 82652 . - 0 ID=cds-WP_094887524.1;Parent=gene-CCO46_RS18835;Dbxref=GenBank:WP_094887524.1;Name=WP_094887524.1;Ontology_term=GO:0008753,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=CCO46_RS18835;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_094887524.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 82759 84108 . - . ID=gene-CCO46_RS18840;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=CCO46_RS18840;old_locus_tag=CCO46_18820 NZ_NPOH01000017.1 Protein Homology CDS 82759 84108 . - 0 ID=cds-WP_094887525.1;Parent=gene-CCO46_RS18840;Dbxref=GenBank:WP_094887525.1;Name=WP_094887525.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=CCO46_RS18840;product=quorum sensing histidine kinase QseC;protein_id=WP_094887525.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 84105 84764 . - . ID=gene-CCO46_RS18845;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=CCO46_RS18845;old_locus_tag=CCO46_18825 NZ_NPOH01000017.1 Protein Homology CDS 84105 84764 . - 0 ID=cds-WP_001221574.1;Parent=gene-CCO46_RS18845;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=CCO46_RS18845;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 84916 85308 . + . ID=gene-CCO46_RS18850;Name=CCO46_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18850;old_locus_tag=CCO46_18830 NZ_NPOH01000017.1 Protein Homology CDS 84916 85308 . + 0 ID=cds-WP_000731552.1;Parent=gene-CCO46_RS18850;Dbxref=GenBank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=CCO46_RS18850;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 85380 86246 . + . ID=gene-CCO46_RS18855;Name=CCO46_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18855;old_locus_tag=CCO46_18835 NZ_NPOH01000017.1 Protein Homology CDS 85380 86246 . + 0 ID=cds-WP_094887526.1;Parent=gene-CCO46_RS18855;Dbxref=GenBank:WP_094887526.1;Name=WP_094887526.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=CCO46_RS18855;product=AraC family transcriptional regulator;protein_id=WP_094887526.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 86357 88615 . + . ID=gene-CCO46_RS18860;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CCO46_RS18860;old_locus_tag=CCO46_18840 NZ_NPOH01000017.1 Protein Homology CDS 86357 88615 . + 0 ID=cds-WP_001281861.1;Parent=gene-CCO46_RS18860;Dbxref=GenBank:WP_001281861.1;Name=WP_001281861.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=CCO46_RS18860;product=DNA topoisomerase IV subunit A;protein_id=WP_001281861.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 88872 89609 . + . ID=gene-CCO46_RS18865;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=CCO46_RS18865;old_locus_tag=CCO46_18845 NZ_NPOH01000017.1 Protein Homology CDS 88872 89609 . + 0 ID=cds-WP_000965730.1;Parent=gene-CCO46_RS18865;Dbxref=GenBank:WP_000965730.1;Name=WP_000965730.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=CCO46_RS18865;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965730.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 89683 91095 . + . ID=gene-CCO46_RS18870;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=CCO46_RS18870;old_locus_tag=CCO46_18850 NZ_NPOH01000017.1 Protein Homology CDS 89683 91095 . + 0 ID=cds-WP_000010658.1;Parent=gene-CCO46_RS18870;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=CCO46_RS18870;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 91116 92036 . + . ID=gene-CCO46_RS18875;Name=CCO46_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18875;old_locus_tag=CCO46_18855 NZ_NPOH01000017.1 Protein Homology CDS 91116 92036 . + 0 ID=cds-WP_058331660.1;Parent=gene-CCO46_RS18875;Dbxref=GenBank:WP_058331660.1;Name=WP_058331660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222782.1;locus_tag=CCO46_RS18875;product=hypothetical protein;protein_id=WP_058331660.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 92726 93631 . + . ID=gene-CCO46_RS25740;Name=CCO46_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25740 NZ_NPOH01000017.1 Protein Homology CDS 92726 93631 . + 0 ID=cds-WP_306293225.1;Parent=gene-CCO46_RS25740;Dbxref=GenBank:WP_306293225.1;Name=WP_306293225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269658.1;locus_tag=CCO46_RS25740;product=hypothetical protein;protein_id=WP_306293225.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 93647 95071 . + . ID=gene-CCO46_RS18885;Name=CCO46_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18885;old_locus_tag=CCO46_18865 NZ_NPOH01000017.1 Protein Homology CDS 93647 95071 . + 0 ID=cds-WP_080197995.1;Parent=gene-CCO46_RS18885;Dbxref=GenBank:WP_080197995.1;Name=WP_080197995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384560.1;locus_tag=CCO46_RS18885;product=hypothetical protein;protein_id=WP_080197995.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 95136 96557 . + . ID=gene-CCO46_RS18890;Name=CCO46_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18890;old_locus_tag=CCO46_18870 NZ_NPOH01000017.1 Protein Homology CDS 95136 96557 . + 0 ID=cds-WP_061371873.1;Parent=gene-CCO46_RS18890;Dbxref=GenBank:WP_061371873.1;Name=WP_061371873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528005.1;locus_tag=CCO46_RS18890;product=DUF4459 domain-containing protein;protein_id=WP_061371873.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 96692 98863 . + . ID=gene-CCO46_RS18895;Name=CCO46_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18895;old_locus_tag=CCO46_18875 NZ_NPOH01000017.1 Protein Homology CDS 96692 98863 . + 0 ID=cds-WP_080197994.1;Parent=gene-CCO46_RS18895;Dbxref=GenBank:WP_080197994.1;Name=WP_080197994.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=CCO46_RS18895;product=YgiQ family radical SAM protein;protein_id=WP_080197994.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 99066 99260 . + . ID=gene-CCO46_RS18900;Name=CCO46_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18900;old_locus_tag=CCO46_18880 NZ_NPOH01000017.1 GeneMarkS-2+ CDS 99066 99260 . + 0 ID=cds-WP_000525384.1;Parent=gene-CCO46_RS18900;Dbxref=GenBank:WP_000525384.1;Name=WP_000525384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS18900;product=hypothetical protein;protein_id=WP_000525384.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 99418 99873 . - . ID=gene-CCO46_RS18905;Name=CCO46_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18905;old_locus_tag=CCO46_18885 NZ_NPOH01000017.1 Protein Homology CDS 99418 99873 . - 0 ID=cds-WP_000128242.1;Parent=gene-CCO46_RS18905;Dbxref=GenBank:WP_000128242.1;Name=WP_000128242.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=CCO46_RS18905;product=HIT family protein;protein_id=WP_000128242.1;transl_table=11 NZ_NPOH01000017.1 RefSeq pseudogene 99918 101403 . - . ID=gene-CCO46_RS18910;Name=CCO46_RS18910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS18910;old_locus_tag=CCO46_18890;pseudo=true NZ_NPOH01000017.1 Protein Homology CDS 99918 101403 . - 0 ID=cds-CCO46_RS18910;Parent=gene-CCO46_RS18910;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=CCO46_RS18910;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 101569 102396 . - . ID=gene-CCO46_RS18915;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=CCO46_RS18915;old_locus_tag=CCO46_18895 NZ_NPOH01000017.1 Protein Homology CDS 101569 102396 . - 0 ID=cds-WP_000013100.1;Parent=gene-CCO46_RS18915;Dbxref=GenBank:WP_000013100.1;Name=WP_000013100.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=CCO46_RS18915;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013100.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 102502 103665 . - . ID=gene-CCO46_RS18920;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=CCO46_RS18920;old_locus_tag=CCO46_18900 NZ_NPOH01000017.1 Protein Homology CDS 102502 103665 . - 0 ID=cds-WP_058331663.1;Parent=gene-CCO46_RS18920;Dbxref=GenBank:WP_058331663.1;Name=WP_058331663.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=CCO46_RS18920;product=alcohol dehydrogenase;protein_id=WP_058331663.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 103858 104757 . + . ID=gene-CCO46_RS18925;Name=CCO46_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18925;old_locus_tag=CCO46_18905 NZ_NPOH01000017.1 Protein Homology CDS 103858 104757 . + 0 ID=cds-WP_139775313.1;Parent=gene-CCO46_RS18925;Dbxref=GenBank:WP_139775313.1;Name=WP_139775313.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382749.1;locus_tag=CCO46_RS18925;product=AraC family transcriptional regulator;protein_id=WP_139775313.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 104821 105480 . - . ID=gene-CCO46_RS18930;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=CCO46_RS18930;old_locus_tag=CCO46_18910 NZ_NPOH01000017.1 Protein Homology CDS 104821 105480 . - 0 ID=cds-WP_000268441.1;Parent=gene-CCO46_RS18930;Dbxref=GenBank:WP_000268441.1;Name=WP_000268441.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=CCO46_RS18930;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268441.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 105620 106807 . - . ID=gene-CCO46_RS18935;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CCO46_RS18935;old_locus_tag=CCO46_18915 NZ_NPOH01000017.1 Protein Homology CDS 105620 106807 . - 0 ID=cds-WP_097363447.1;Parent=gene-CCO46_RS18935;Dbxref=GenBank:WP_097363447.1;Name=WP_097363447.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=CCO46_RS18935;product=cystathionine beta-lyase;protein_id=WP_097363447.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 107059 107793 . + . ID=gene-CCO46_RS18945;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=CCO46_RS18945;old_locus_tag=CCO46_18925 NZ_NPOH01000017.1 Protein Homology CDS 107059 107793 . + 0 ID=cds-WP_058331664.1;Parent=gene-CCO46_RS18945;Dbxref=GenBank:WP_058331664.1;Name=WP_058331664.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=CCO46_RS18945;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_058331664.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 107800 108225 . + . ID=gene-CCO46_RS18950;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=CCO46_RS18950;old_locus_tag=CCO46_18930 NZ_NPOH01000017.1 Protein Homology CDS 107800 108225 . + 0 ID=cds-WP_001251476.1;Parent=gene-CCO46_RS18950;Dbxref=GenBank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=CCO46_RS18950;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 108338 109222 . - . ID=gene-CCO46_RS18955;Name=CCO46_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18955;old_locus_tag=CCO46_18935 NZ_NPOH01000017.1 Protein Homology CDS 108338 109222 . - 0 ID=cds-WP_000019035.1;Parent=gene-CCO46_RS18955;Dbxref=GenBank:WP_000019035.1;Name=WP_000019035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=CCO46_RS18955;product=SDR family oxidoreductase;protein_id=WP_000019035.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 109346 109750 . - . ID=gene-CCO46_RS18960;Name=CCO46_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18960;old_locus_tag=CCO46_18940 NZ_NPOH01000017.1 Protein Homology CDS 109346 109750 . - 0 ID=cds-WP_000665656.1;Parent=gene-CCO46_RS18960;Dbxref=GenBank:WP_000665656.1;Name=WP_000665656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=CCO46_RS18960;product=hypothetical protein;protein_id=WP_000665656.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 109737 110147 . - . ID=gene-CCO46_RS18965;Name=CCO46_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18965;old_locus_tag=CCO46_18945 NZ_NPOH01000017.1 Protein Homology CDS 109737 110147 . - 0 ID=cds-WP_000936441.1;Parent=gene-CCO46_RS18965;Dbxref=GenBank:WP_000936441.1;Name=WP_000936441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=CCO46_RS18965;product=hypothetical protein;protein_id=WP_000936441.1;transl_table=11 NZ_NPOH01000017.1 RefSeq gene 110251 110754 . + . ID=gene-CCO46_RS18970;Name=CCO46_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18970;old_locus_tag=CCO46_18950 NZ_NPOH01000017.1 Protein Homology CDS 110251 110754 . + 0 ID=cds-WP_001534190.1;Parent=gene-CCO46_RS18970;Dbxref=GenBank:WP_001534190.1;Name=WP_001534190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=CCO46_RS18970;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001534190.1;transl_table=11 ##sequence-region NZ_NPOH01000018.1 1 110724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000018.1 RefSeq region 1 110724 . + . ID=NZ_NPOH01000018.1:1..110724;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000018.1 RefSeq gene 219 986 . - . ID=gene-CCO46_RS18980;Name=CCO46_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18980;old_locus_tag=CCO46_18960 NZ_NPOH01000018.1 Protein Homology CDS 219 986 . - 0 ID=cds-WP_094887815.1;Parent=gene-CCO46_RS18980;Dbxref=GenBank:WP_094887815.1;Name=WP_094887815.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=CCO46_RS18980;product=amidohydrolase;protein_id=WP_094887815.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 1095 3539 . - . ID=gene-CCO46_RS18985;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=CCO46_RS18985;old_locus_tag=CCO46_18965 NZ_NPOH01000018.1 Protein Homology CDS 1095 3539 . - 0 ID=cds-WP_000973041.1;Parent=gene-CCO46_RS18985;Dbxref=GenBank:WP_000973041.1;Name=WP_000973041.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=CCO46_RS18985;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973041.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 3779 4357 . + . ID=gene-CCO46_RS18990;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=CCO46_RS18990;old_locus_tag=CCO46_18970 NZ_NPOH01000018.1 Protein Homology CDS 3779 4357 . + 0 ID=cds-WP_000284051.1;Parent=gene-CCO46_RS18990;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=CCO46_RS18990;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 4521 5288 . + . ID=gene-CCO46_RS18995;Name=CCO46_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS18995;old_locus_tag=CCO46_18975 NZ_NPOH01000018.1 Protein Homology CDS 4521 5288 . + 0 ID=cds-WP_000333387.1;Parent=gene-CCO46_RS18995;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=CCO46_RS18995;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 5259 5999 . - . ID=gene-CCO46_RS19000;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=CCO46_RS19000;old_locus_tag=CCO46_18980 NZ_NPOH01000018.1 Protein Homology CDS 5259 5999 . - 0 ID=cds-WP_001225658.1;Parent=gene-CCO46_RS19000;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=CCO46_RS19000;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 6249 7304 . + . ID=gene-CCO46_RS19005;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CCO46_RS19005;old_locus_tag=CCO46_18985 NZ_NPOH01000018.1 Protein Homology CDS 6249 7304 . + 0 ID=cds-WP_001226199.1;Parent=gene-CCO46_RS19005;Dbxref=GenBank:WP_001226199.1;Name=WP_001226199.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=CCO46_RS19005;product=DNA polymerase IV;protein_id=WP_001226199.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 7524 8663 . + . ID=gene-CCO46_RS19010;Name=CCO46_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19010;old_locus_tag=CCO46_18990 NZ_NPOH01000018.1 Protein Homology CDS 7524 8663 . + 0 ID=cds-WP_000528901.1;Parent=gene-CCO46_RS19010;Dbxref=GenBank:WP_000528901.1;Name=WP_000528901.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=CCO46_RS19010;product=RNA ligase RtcB family protein;protein_id=WP_000528901.1;transl_table=11 NZ_NPOH01000018.1 RefSeq pseudogene 8660 9274 . + . ID=gene-CCO46_RS19015;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=pseudogene;locus_tag=CCO46_RS19015;old_locus_tag=CCO46_18995;pseudo=true NZ_NPOH01000018.1 Protein Homology CDS 8660 9274 . + 0 ID=cds-CCO46_RS19015;Parent=gene-CCO46_RS19015;Note=internal stop;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=CCO46_RS19015;product=peptide chain release factor H;pseudo=true;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 9430 10887 . - . ID=gene-CCO46_RS19020;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=CCO46_RS19020;old_locus_tag=CCO46_19000 NZ_NPOH01000018.1 Protein Homology CDS 9430 10887 . - 0 ID=cds-WP_001292977.1;Parent=gene-CCO46_RS19020;Dbxref=GenBank:WP_001292977.1;Name=WP_001292977.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=CCO46_RS19020;product=cytosol nonspecific dipeptidase;protein_id=WP_001292977.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 11136 11594 . + . ID=gene-CCO46_RS19025;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=CCO46_RS19025;old_locus_tag=CCO46_19005 NZ_NPOH01000018.1 Protein Homology CDS 11136 11594 . + 0 ID=cds-WP_001292018.1;Parent=gene-CCO46_RS19025;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=CCO46_RS19025;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 11683 12927 . + . ID=gene-CCO46_RS19030;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=CCO46_RS19030;old_locus_tag=CCO46_19010 NZ_NPOH01000018.1 Protein Homology CDS 11683 12927 . + 0 ID=cds-WP_001728791.1;Parent=gene-CCO46_RS19030;Dbxref=GenBank:WP_001728791.1;Name=WP_001728791.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=CCO46_RS19030;product=esterase FrsA;protein_id=WP_001728791.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 12985 13386 . + . ID=gene-CCO46_RS19035;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=CCO46_RS19035;old_locus_tag=CCO46_19015 NZ_NPOH01000018.1 Protein Homology CDS 12985 13386 . + 0 ID=cds-WP_000174693.1;Parent=gene-CCO46_RS19035;Dbxref=GenBank:WP_000174693.1;Name=WP_000174693.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=CCO46_RS19035;product=sigma factor-binding protein Crl;protein_id=WP_000174693.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 13437 14489 . - . ID=gene-CCO46_RS19040;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=CCO46_RS19040;old_locus_tag=CCO46_19020 NZ_NPOH01000018.1 Protein Homology CDS 13437 14489 . - 0 ID=cds-WP_001043673.1;Parent=gene-CCO46_RS19040;Dbxref=GenBank:WP_001043673.1;Name=WP_001043673.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=CCO46_RS19040;product=phosphoporin PhoE;protein_id=WP_001043673.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 14772 15875 . + . ID=gene-CCO46_RS19045;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=CCO46_RS19045;old_locus_tag=CCO46_19025 NZ_NPOH01000018.1 Protein Homology CDS 14772 15875 . + 0 ID=cds-WP_001285275.1;Parent=gene-CCO46_RS19045;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=CCO46_RS19045;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 15887 17137 . + . ID=gene-CCO46_RS19050;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=CCO46_RS19050;old_locus_tag=CCO46_19030 NZ_NPOH01000018.1 Protein Homology CDS 15887 17137 . + 0 ID=cds-WP_094887817.1;Parent=gene-CCO46_RS19050;Dbxref=GenBank:WP_094887817.1;Name=WP_094887817.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=CCO46_RS19050;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_094887817.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 17253 17328 . + . ID=gene-CCO46_RS19055;Name=CCO46_RS19055;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS19055;old_locus_tag=CCO46_19035 NZ_NPOH01000018.1 tRNAscan-SE tRNA 17253 17328 . + . ID=rna-CCO46_RS19055;Parent=gene-CCO46_RS19055;anticodon=(pos:17286..17288);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS19055;product=tRNA-Thr NZ_NPOH01000018.1 tRNAscan-SE exon 17253 17328 . + . ID=exon-CCO46_RS19055-1;Parent=rna-CCO46_RS19055;anticodon=(pos:17286..17288);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS19055;product=tRNA-Thr NZ_NPOH01000018.1 RefSeq gene 17519 17917 . + . ID=gene-CCO46_RS19060;Name=CCO46_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19060;old_locus_tag=CCO46_19040 NZ_NPOH01000018.1 Protein Homology CDS 17519 17917 . + 0 ID=cds-WP_000766838.1;Parent=gene-CCO46_RS19060;Dbxref=GenBank:WP_000766838.1;Name=WP_000766838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=CCO46_RS19060;product=hypothetical protein;protein_id=WP_000766838.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 17965 18723 . - . ID=gene-CCO46_RS19065;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=CCO46_RS19065;old_locus_tag=CCO46_19045 NZ_NPOH01000018.1 Protein Homology CDS 17965 18723 . - 0 ID=cds-WP_001247018.1;Parent=gene-CCO46_RS19065;Dbxref=GenBank:WP_001247018.1;Name=WP_001247018.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=CCO46_RS19065;product=fimbrial biogenesis chaperone StbE;protein_id=WP_001247018.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 18689 20014 . - . ID=gene-CCO46_RS19070;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=CCO46_RS19070;old_locus_tag=CCO46_19050 NZ_NPOH01000018.1 Protein Homology CDS 18689 20014 . - 0 ID=cds-WP_000899100.1;Parent=gene-CCO46_RS19070;Dbxref=GenBank:WP_000899100.1;Name=WP_000899100.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO46_RS19070;product=fimbrial usher protein StbD;protein_id=WP_000899100.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 20019 22580 . - . ID=gene-CCO46_RS19075;Name=CCO46_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19075;old_locus_tag=CCO46_19055 NZ_NPOH01000018.1 Protein Homology CDS 20019 22580 . - 0 ID=cds-WP_097363449.1;Parent=gene-CCO46_RS19075;Dbxref=GenBank:WP_097363449.1;Name=WP_097363449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=CCO46_RS19075;product=fimbrial outer membrane usher protein;protein_id=WP_097363449.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 22564 23325 . - . ID=gene-CCO46_RS19080;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=CCO46_RS19080;old_locus_tag=CCO46_19060 NZ_NPOH01000018.1 Protein Homology CDS 22564 23325 . - 0 ID=cds-WP_058331269.1;Parent=gene-CCO46_RS19080;Dbxref=GenBank:WP_058331269.1;Name=WP_058331269.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=CCO46_RS19080;product=fimbrial biogenesis chaperone StbB;protein_id=WP_058331269.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 23387 23923 . - . ID=gene-CCO46_RS19085;Name=CCO46_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19085;old_locus_tag=CCO46_19065 NZ_NPOH01000018.1 Protein Homology CDS 23387 23923 . - 0 ID=cds-WP_094964498.1;Parent=gene-CCO46_RS19085;Dbxref=GenBank:WP_094964498.1;Name=WP_094964498.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=CCO46_RS19085;product=fimbrial protein;protein_id=WP_094964498.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 24586 25320 . + . ID=gene-CCO46_RS19095;Name=CCO46_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19095;old_locus_tag=CCO46_19075 NZ_NPOH01000018.1 Protein Homology CDS 24586 25320 . + 0 ID=cds-WP_139775868.1;Parent=gene-CCO46_RS19095;Dbxref=GenBank:WP_139775868.1;Name=WP_139775868.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=CCO46_RS19095;product=winged helix-turn-helix domain-containing protein;protein_id=WP_139775868.1;transl_table=11 NZ_NPOH01000018.1 RefSeq pseudogene 25293 25593 . + . ID=gene-CCO46_RS19100;Name=CCO46_RS19100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS19100;old_locus_tag=CCO46_19080;pseudo=true NZ_NPOH01000018.1 Protein Homology CDS 25293 25593 . + 0 ID=cds-CCO46_RS19100;Parent=gene-CCO46_RS19100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=CCO46_RS19100;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000018.1 RefSeq pseudogene 26095 27670 . + . ID=gene-CCO46_RS19110;Name=CCO46_RS19110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS19110;old_locus_tag=CCO46_19090;pseudo=true NZ_NPOH01000018.1 Protein Homology CDS 26095 27670 . + 0 ID=cds-CCO46_RS19110;Parent=gene-CCO46_RS19110;Note=frameshifted;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=CCO46_RS19110;product=EAL domain-containing protein;pseudo=true;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 27770 28513 . + . ID=gene-CCO46_RS19115;Name=CCO46_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19115;old_locus_tag=CCO46_19095 NZ_NPOH01000018.1 Protein Homology CDS 27770 28513 . + 0 ID=cds-WP_000081368.1;Parent=gene-CCO46_RS19115;Dbxref=GenBank:WP_000081368.1;Name=WP_000081368.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=CCO46_RS19115;product=transcriptional regulator;protein_id=WP_000081368.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 28486 28974 . + . ID=gene-CCO46_RS19120;Name=CCO46_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19120;old_locus_tag=CCO46_19100 NZ_NPOH01000018.1 Protein Homology CDS 28486 28974 . + 0 ID=cds-WP_000545426.1;Parent=gene-CCO46_RS19120;Dbxref=GenBank:WP_000545426.1;Name=WP_000545426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=CCO46_RS19120;product=hypothetical protein;protein_id=WP_000545426.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 29376 29900 . + . ID=gene-CCO46_RS19125;Name=CCO46_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19125;old_locus_tag=CCO46_19105 NZ_NPOH01000018.1 Protein Homology CDS 29376 29900 . + 0 ID=cds-WP_000830237.1;Parent=gene-CCO46_RS19125;Dbxref=GenBank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=CCO46_RS19125;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 30044 30685 . + . ID=gene-CCO46_RS19130;Name=CCO46_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19130;old_locus_tag=CCO46_19110 NZ_NPOH01000018.1 Protein Homology CDS 30044 30685 . + 0 ID=cds-WP_000610827.1;Parent=gene-CCO46_RS19130;Dbxref=GenBank:WP_000610827.1;Name=WP_000610827.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=CCO46_RS19130;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610827.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 30696 30920 . + . ID=gene-CCO46_RS19135;Name=CCO46_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19135;old_locus_tag=CCO46_19115 NZ_NPOH01000018.1 Protein Homology CDS 30696 30920 . + 0 ID=cds-WP_000737127.1;Parent=gene-CCO46_RS19135;Dbxref=GenBank:WP_000737127.1;Name=WP_000737127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=CCO46_RS19135;product=membrane protein;protein_id=WP_000737127.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 30978 31337 . + . ID=gene-CCO46_RS19140;Name=CCO46_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19140;old_locus_tag=CCO46_19120 NZ_NPOH01000018.1 Protein Homology CDS 30978 31337 . + 0 ID=cds-WP_000722978.1;Parent=gene-CCO46_RS19140;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=CCO46_RS19140;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 31407 32864 . - . ID=gene-CCO46_RS19145;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=CCO46_RS19145;old_locus_tag=CCO46_19125 NZ_NPOH01000018.1 Protein Homology CDS 31407 32864 . - 0 ID=cds-WP_058331307.1;Parent=gene-CCO46_RS19145;Dbxref=GenBank:WP_058331307.1;Name=WP_058331307.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=CCO46_RS19145;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_058331307.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 32881 36048 . - . ID=gene-CCO46_RS19150;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=CCO46_RS19150;old_locus_tag=CCO46_19130 NZ_NPOH01000018.1 Protein Homology CDS 32881 36048 . - 0 ID=cds-WP_097363450.1;Parent=gene-CCO46_RS19150;Dbxref=GenBank:WP_097363450.1;Name=WP_097363450.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=CCO46_RS19150;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_097363450.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 36045 37271 . - . ID=gene-CCO46_RS19155;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=CCO46_RS19155;old_locus_tag=CCO46_19135 NZ_NPOH01000018.1 Protein Homology CDS 36045 37271 . - 0 ID=cds-WP_097363451.1;Parent=gene-CCO46_RS19155;Dbxref=GenBank:WP_097363451.1;Name=WP_097363451.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=CCO46_RS19155;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_097363451.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 37548 39836 . + . ID=gene-CCO46_RS19160;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=CCO46_RS19160;old_locus_tag=CCO46_19140 NZ_NPOH01000018.1 Protein Homology CDS 37548 39836 . + 0 ID=cds-WP_097363452.1;Parent=gene-CCO46_RS19160;Dbxref=GenBank:WP_097363452.1;Name=WP_097363452.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=CCO46_RS19160;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_097363452.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 39848 40312 . + . ID=gene-CCO46_RS19165;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=CCO46_RS19165;old_locus_tag=CCO46_19145 NZ_NPOH01000018.1 Protein Homology CDS 39848 40312 . + 0 ID=cds-WP_001020583.1;Parent=gene-CCO46_RS19165;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=CCO46_RS19165;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 40390 40584 . + . ID=gene-CCO46_RS19170;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=CCO46_RS19170;old_locus_tag=CCO46_19150 NZ_NPOH01000018.1 Protein Homology CDS 40390 40584 . + 0 ID=cds-WP_001159470.1;Parent=gene-CCO46_RS19170;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=CCO46_RS19170;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 40876 42129 . + . ID=gene-CCO46_RS19175;Name=CCO46_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19175;old_locus_tag=CCO46_19155 NZ_NPOH01000018.1 Protein Homology CDS 40876 42129 . + 0 ID=cds-WP_000288503.1;Parent=gene-CCO46_RS19175;Dbxref=GenBank:WP_000288503.1;Name=WP_000288503.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=CCO46_RS19175;product=MFS transporter;protein_id=WP_000288503.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 42317 44275 . + . ID=gene-CCO46_RS19180;Name=CCO46_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19180;old_locus_tag=CCO46_19160 NZ_NPOH01000018.1 Protein Homology CDS 42317 44275 . + 0 ID=cds-WP_097363453.1;Parent=gene-CCO46_RS19180;Dbxref=GenBank:WP_097363453.1;Name=WP_097363453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=CCO46_RS19180;product=site-specific DNA-methyltransferase;protein_id=WP_097363453.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 44285 47257 . + . ID=gene-CCO46_RS19185;Name=CCO46_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19185;old_locus_tag=CCO46_19165 NZ_NPOH01000018.1 Protein Homology CDS 44285 47257 . + 0 ID=cds-WP_080160372.1;Parent=gene-CCO46_RS19185;Dbxref=GenBank:WP_080160372.1;Name=WP_080160372.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=CCO46_RS19185;product=type III restriction-modification system endonuclease;protein_id=WP_080160372.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 47534 47635 . + . ID=gene-CCO46_RS19190;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=CCO46_RS19190;old_locus_tag=CCO46_19170 NZ_NPOH01000018.1 Protein Homology CDS 47534 47635 . + 0 ID=cds-WP_000934834.1;Parent=gene-CCO46_RS19190;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=CCO46_RS19190;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 47752 49155 . + . ID=gene-CCO46_RS19195;Name=CCO46_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19195;old_locus_tag=CCO46_19175 NZ_NPOH01000018.1 Protein Homology CDS 47752 49155 . + 0 ID=cds-WP_000393711.1;Parent=gene-CCO46_RS19195;Dbxref=GenBank:WP_000393711.1;Name=WP_000393711.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=CCO46_RS19195;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393711.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 49152 50162 . + . ID=gene-CCO46_RS19200;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO46_RS19200;old_locus_tag=CCO46_19180 NZ_NPOH01000018.1 Protein Homology CDS 49152 50162 . + 0 ID=cds-WP_000151047.1;Parent=gene-CCO46_RS19200;Dbxref=GenBank:WP_000151047.1;Name=WP_000151047.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=CCO46_RS19200;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151047.1;transl_table=11 NZ_NPOH01000018.1 RefSeq pseudogene 50162 50233 . + . ID=gene-CCO46_RS25745;Name=CCO46_RS25745;end_range=50233,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25745;partial=true;pseudo=true NZ_NPOH01000018.1 Protein Homology CDS 50162 50233 . + 0 ID=cds-CCO46_RS25745;Parent=gene-CCO46_RS25745;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=50233,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=CCO46_RS25745;partial=true;product=DUF2474 family protein;pseudo=true;transl_table=11 NZ_NPOH01000018.1 RefSeq pseudogene 50212 50404 . + . ID=gene-CCO46_RS25750;Name=CCO46_RS25750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25750;pseudo=true NZ_NPOH01000018.1 Protein Homology CDS 50212 50404 . + 0 ID=cds-CCO46_RS25750;Parent=gene-CCO46_RS25750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=CCO46_RS25750;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 50500 51504 . + . ID=gene-CCO46_RS19210;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=CCO46_RS19210;old_locus_tag=CCO46_19190 NZ_NPOH01000018.1 Protein Homology CDS 50500 51504 . + 0 ID=cds-WP_000074605.1;Parent=gene-CCO46_RS19210;Dbxref=GenBank:WP_000074605.1;Name=WP_000074605.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=CCO46_RS19210;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074605.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 51650 53758 . + . ID=gene-CCO46_RS19215;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=CCO46_RS19215;old_locus_tag=CCO46_19195 NZ_NPOH01000018.1 Protein Homology CDS 51650 53758 . + 0 ID=cds-WP_140439318.1;Parent=gene-CCO46_RS19215;Dbxref=GenBank:WP_140439318.1;Name=WP_140439318.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=CCO46_RS19215;product=ferrioxamine B receptor FoxA;protein_id=WP_140439318.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 53799 54431 . - . ID=gene-CCO46_RS19220;Name=CCO46_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19220;old_locus_tag=CCO46_19200 NZ_NPOH01000018.1 Protein Homology CDS 53799 54431 . - 0 ID=cds-WP_000433131.1;Parent=gene-CCO46_RS19220;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=CCO46_RS19220;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 54663 54938 . + . ID=gene-CCO46_RS19225;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=CCO46_RS19225;old_locus_tag=CCO46_19205 NZ_NPOH01000018.1 Protein Homology CDS 54663 54938 . + 0 ID=cds-WP_000848026.1;Parent=gene-CCO46_RS19225;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=CCO46_RS19225;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 55074 56699 . - . ID=gene-CCO46_RS19230;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=CCO46_RS19230;old_locus_tag=CCO46_19210 NZ_NPOH01000018.1 Protein Homology CDS 55074 56699 . - 0 ID=cds-WP_010835257.1;Parent=gene-CCO46_RS19230;Dbxref=GenBank:WP_010835257.1;Name=WP_010835257.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=CCO46_RS19230;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_010835257.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 56965 57852 . + . ID=gene-CCO46_RS19235;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=CCO46_RS19235;old_locus_tag=CCO46_19215 NZ_NPOH01000018.1 Protein Homology CDS 56965 57852 . + 0 ID=cds-WP_000052223.1;Parent=gene-CCO46_RS19235;Dbxref=GenBank:WP_000052223.1;Name=WP_000052223.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=CCO46_RS19235;product=methylisocitrate lyase;protein_id=WP_000052223.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 57975 59144 . + . ID=gene-CCO46_RS19240;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=CCO46_RS19240;old_locus_tag=CCO46_19220 NZ_NPOH01000018.1 Protein Homology CDS 57975 59144 . + 0 ID=cds-WP_000132749.1;Parent=gene-CCO46_RS19240;Dbxref=GenBank:WP_000132749.1;Name=WP_000132749.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=CCO46_RS19240;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_000132749.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 59184 60635 . + . ID=gene-CCO46_RS19245;Name=CCO46_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19245;old_locus_tag=CCO46_19225 NZ_NPOH01000018.1 Protein Homology CDS 59184 60635 . + 0 ID=cds-WP_000107071.1;Parent=gene-CCO46_RS19245;Dbxref=GenBank:WP_000107071.1;Name=WP_000107071.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=CCO46_RS19245;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_000107071.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 60676 62562 . + . ID=gene-CCO46_RS19250;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=CCO46_RS19250;old_locus_tag=CCO46_19230 NZ_NPOH01000018.1 Protein Homology CDS 60676 62562 . + 0 ID=cds-WP_097363454.1;Parent=gene-CCO46_RS19250;Dbxref=GenBank:WP_097363454.1;Name=WP_097363454.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=CCO46_RS19250;product=propionate--CoA ligase;protein_id=WP_097363454.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 62666 63640 . - . ID=gene-CCO46_RS19255;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CCO46_RS19255;old_locus_tag=CCO46_19235 NZ_NPOH01000018.1 Protein Homology CDS 62666 63640 . - 0 ID=cds-WP_000130724.1;Parent=gene-CCO46_RS19255;Dbxref=GenBank:WP_000130724.1;Name=WP_000130724.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=CCO46_RS19255;product=porphobilinogen synthase;protein_id=WP_000130724.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 64153 67065 . + . ID=gene-CCO46_RS19260;Name=CCO46_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19260;old_locus_tag=CCO46_19240 NZ_NPOH01000018.1 Protein Homology CDS 64153 67065 . + 0 ID=cds-WP_023202227.1;Parent=gene-CCO46_RS19260;Dbxref=GenBank:WP_023202227.1;Name=WP_023202227.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=CCO46_RS19260;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_023202227.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 67150 67773 . + . ID=gene-CCO46_RS19265;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=CCO46_RS19265;old_locus_tag=CCO46_19245 NZ_NPOH01000018.1 Protein Homology CDS 67150 67773 . + 0 ID=cds-WP_000950242.1;Parent=gene-CCO46_RS19265;Dbxref=GenBank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=CCO46_RS19265;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 67818 68975 . - . ID=gene-CCO46_RS19270;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=CCO46_RS19270;old_locus_tag=CCO46_19250 NZ_NPOH01000018.1 Protein Homology CDS 67818 68975 . - 0 ID=cds-WP_000830777.1;Parent=gene-CCO46_RS19270;Dbxref=GenBank:WP_000830777.1;Name=WP_000830777.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=CCO46_RS19270;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830777.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 69322 70542 . + . ID=gene-CCO46_RS19280;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=CCO46_RS19280;old_locus_tag=CCO46_19260 NZ_NPOH01000018.1 Protein Homology CDS 69322 70542 . + 0 ID=cds-WP_000477023.1;Parent=gene-CCO46_RS19280;Dbxref=GenBank:WP_000477023.1;Name=WP_000477023.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=CCO46_RS19280;product=peptide antibiotic transporter SbmA;protein_id=WP_000477023.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 70557 71651 . + . ID=gene-CCO46_RS19285;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=CCO46_RS19285;old_locus_tag=CCO46_19265 NZ_NPOH01000018.1 Protein Homology CDS 70557 71651 . + 0 ID=cds-WP_001271417.1;Parent=gene-CCO46_RS19285;Dbxref=GenBank:WP_001271417.1;Name=WP_001271417.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=CCO46_RS19285;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271417.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 71689 71997 . - . ID=gene-CCO46_RS19290;Name=CCO46_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19290;old_locus_tag=CCO46_19270 NZ_NPOH01000018.1 Protein Homology CDS 71689 71997 . - 0 ID=cds-WP_000763139.1;Parent=gene-CCO46_RS19290;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=CCO46_RS19290;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 72265 72480 . + . ID=gene-CCO46_RS19295;Name=CCO46_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19295;old_locus_tag=CCO46_19275 NZ_NPOH01000018.1 Protein Homology CDS 72265 72480 . + 0 ID=cds-WP_001239242.1;Parent=gene-CCO46_RS19295;Dbxref=GenBank:WP_001239242.1;Name=WP_001239242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=CCO46_RS19295;product=DUF2754 family protein;protein_id=WP_001239242.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 72506 73600 . - . ID=gene-CCO46_RS19300;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=CCO46_RS19300;old_locus_tag=CCO46_19280 NZ_NPOH01000018.1 Protein Homology CDS 72506 73600 . - 0 ID=cds-WP_001096588.1;Parent=gene-CCO46_RS19300;Dbxref=GenBank:WP_001096588.1;Name=WP_001096588.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=CCO46_RS19300;product=D-alanine--D-alanine ligase;protein_id=WP_001096588.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 73678 74391 . + . ID=gene-CCO46_RS19305;Name=CCO46_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19305;old_locus_tag=CCO46_19285 NZ_NPOH01000018.1 Protein Homology CDS 73678 74391 . + 0 ID=cds-WP_000480794.1;Parent=gene-CCO46_RS19305;Dbxref=GenBank:WP_000480794.1;Name=WP_000480794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=CCO46_RS19305;product=extensin family protein;protein_id=WP_000480794.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 74560 75771 . + . ID=gene-CCO46_RS19310;Name=CCO46_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19310;old_locus_tag=CCO46_19290 NZ_NPOH01000018.1 Protein Homology CDS 74560 75771 . + 0 ID=cds-WP_000446768.1;Parent=gene-CCO46_RS19310;Dbxref=GenBank:WP_000446768.1;Name=WP_000446768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=CCO46_RS19310;product=multidrug efflux MFS transporter;protein_id=WP_000446768.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 76068 76328 . + . ID=gene-CCO46_RS19315;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=CCO46_RS19315;old_locus_tag=CCO46_19295 NZ_NPOH01000018.1 Protein Homology CDS 76068 76328 . + 0 ID=cds-WP_001518423.1;Parent=gene-CCO46_RS19315;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=CCO46_RS19315;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 76681 77001 . + . ID=gene-CCO46_RS19320;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=CCO46_RS19320;old_locus_tag=CCO46_19300 NZ_NPOH01000018.1 Protein Homology CDS 76681 77001 . + 0 ID=cds-WP_000705165.1;Parent=gene-CCO46_RS19320;Dbxref=GenBank:WP_000705165.1;Name=WP_000705165.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=CCO46_RS19320;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705165.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 77093 78205 . + . ID=gene-CCO46_RS19325;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=CCO46_RS19325;old_locus_tag=CCO46_19305 NZ_NPOH01000018.1 Protein Homology CDS 77093 78205 . + 0 ID=cds-WP_000484083.1;Parent=gene-CCO46_RS19325;Dbxref=GenBank:WP_000484083.1;Name=WP_000484083.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=CCO46_RS19325;product=diguanylate cyclase AdrA;protein_id=WP_000484083.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 78220 79029 . - . ID=gene-CCO46_RS19330;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CCO46_RS19330;old_locus_tag=CCO46_19310 NZ_NPOH01000018.1 Protein Homology CDS 78220 79029 . - 0 ID=cds-WP_000412193.1;Parent=gene-CCO46_RS19330;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=CCO46_RS19330;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 79169 79624 . + . ID=gene-CCO46_RS19335;Name=CCO46_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19335;old_locus_tag=CCO46_19315 NZ_NPOH01000018.1 Protein Homology CDS 79169 79624 . + 0 ID=cds-WP_080160374.1;Parent=gene-CCO46_RS19335;Dbxref=GenBank:WP_080160374.1;Name=WP_080160374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=CCO46_RS19335;product=YaiI/YqxD family protein;protein_id=WP_080160374.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 79809 80354 . + . ID=gene-CCO46_RS19340;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=CCO46_RS19340;old_locus_tag=CCO46_19320 NZ_NPOH01000018.1 Protein Homology CDS 79809 80354 . + 0 ID=cds-WP_000983569.1;Parent=gene-CCO46_RS19340;Dbxref=GenBank:WP_000983569.1;Name=WP_000983569.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=CCO46_RS19340;product=shikimate kinase AroL;protein_id=WP_000983569.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 80381 80572 . + . ID=gene-CCO46_RS19345;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=CCO46_RS19345;old_locus_tag=CCO46_19325 NZ_NPOH01000018.1 Protein Homology CDS 80381 80572 . + 0 ID=cds-WP_001143161.1;Parent=gene-CCO46_RS19345;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=CCO46_RS19345;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 80823 81500 . + . ID=gene-CCO46_RS19350;Name=CCO46_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19350;old_locus_tag=CCO46_19330 NZ_NPOH01000018.1 Protein Homology CDS 80823 81500 . + 0 ID=cds-WP_001276437.1;Parent=gene-CCO46_RS19350;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=CCO46_RS19350;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 81572 81856 . + . ID=gene-CCO46_RS19355;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=CCO46_RS19355;old_locus_tag=CCO46_19335 NZ_NPOH01000018.1 Protein Homology CDS 81572 81856 . + 0 ID=cds-WP_000941953.1;Parent=gene-CCO46_RS19355;Dbxref=GenBank:WP_000941953.1;Name=WP_000941953.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=CCO46_RS19355;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941953.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 81894 82805 . - . ID=gene-CCO46_RS19360;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=CCO46_RS19360;old_locus_tag=CCO46_19340 NZ_NPOH01000018.1 Protein Homology CDS 81894 82805 . - 0 ID=cds-WP_000964305.1;Parent=gene-CCO46_RS19360;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=CCO46_RS19360;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 82931 83839 . + . ID=gene-CCO46_RS19365;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=CCO46_RS19365;old_locus_tag=CCO46_19345 NZ_NPOH01000018.1 Protein Homology CDS 82931 83839 . + 0 ID=cds-WP_080160375.1;Parent=gene-CCO46_RS19365;Dbxref=GenBank:WP_080160375.1;Name=WP_080160375.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=CCO46_RS19365;product=fructokinase;protein_id=WP_080160375.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 83859 85031 . - . ID=gene-CCO46_RS19370;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=CCO46_RS19370;old_locus_tag=CCO46_19350 NZ_NPOH01000018.1 Protein Homology CDS 83859 85031 . - 0 ID=cds-WP_058331278.1;Parent=gene-CCO46_RS19370;Dbxref=GenBank:WP_058331278.1;Name=WP_058331278.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=CCO46_RS19370;product=MFS transporter AraJ;protein_id=WP_058331278.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 85204 88344 . - . ID=gene-CCO46_RS19375;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CCO46_RS19375;old_locus_tag=CCO46_19355 NZ_NPOH01000018.1 Protein Homology CDS 85204 88344 . - 0 ID=cds-WP_080160376.1;Parent=gene-CCO46_RS19375;Dbxref=GenBank:WP_080160376.1;Name=WP_080160376.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=CCO46_RS19375;product=exonuclease subunit SbcC;protein_id=WP_080160376.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 88341 89543 . - . ID=gene-CCO46_RS19380;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CCO46_RS19380;old_locus_tag=CCO46_19360 NZ_NPOH01000018.1 Protein Homology CDS 88341 89543 . - 0 ID=cds-WP_023194028.1;Parent=gene-CCO46_RS19380;Dbxref=GenBank:WP_023194028.1;Name=WP_023194028.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=CCO46_RS19380;product=exonuclease subunit SbcD;protein_id=WP_023194028.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 89757 90446 . + . ID=gene-CCO46_RS19385;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=CCO46_RS19385;old_locus_tag=CCO46_19365 NZ_NPOH01000018.1 Protein Homology CDS 89757 90446 . + 0 ID=cds-WP_000113921.1;Parent=gene-CCO46_RS19385;Dbxref=GenBank:WP_000113921.1;Name=WP_000113921.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=CCO46_RS19385;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113921.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 90516 91811 . + . ID=gene-CCO46_RS19390;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=CCO46_RS19390;old_locus_tag=CCO46_19370 NZ_NPOH01000018.1 Protein Homology CDS 90516 91811 . + 0 ID=cds-WP_061371920.1;Parent=gene-CCO46_RS19390;Dbxref=GenBank:WP_061371920.1;Name=WP_061371920.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=CCO46_RS19390;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_061371920.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 92220 93539 . + . ID=gene-CCO46_RS19395;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=CCO46_RS19395;old_locus_tag=CCO46_19375 NZ_NPOH01000018.1 Protein Homology CDS 92220 93539 . + 0 ID=cds-WP_000149625.1;Parent=gene-CCO46_RS19395;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=CCO46_RS19395;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 93614 94984 . + . ID=gene-CCO46_RS19400;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=CCO46_RS19400;old_locus_tag=CCO46_19380 NZ_NPOH01000018.1 Protein Homology CDS 93614 94984 . + 0 ID=cds-WP_001537837.1;Parent=gene-CCO46_RS19400;Dbxref=GenBank:WP_001537837.1;Name=WP_001537837.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=CCO46_RS19400;product=proline-specific permease ProY;protein_id=WP_001537837.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 95146 96963 . + . ID=gene-CCO46_RS19405;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=CCO46_RS19405;old_locus_tag=CCO46_19385 NZ_NPOH01000018.1 Protein Homology CDS 95146 96963 . + 0 ID=cds-WP_058331279.1;Parent=gene-CCO46_RS19405;Dbxref=GenBank:WP_058331279.1;Name=WP_058331279.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=CCO46_RS19405;product=maltodextrin glucosidase;protein_id=WP_058331279.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 96992 98247 . - . ID=gene-CCO46_RS19410;Name=CCO46_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19410;old_locus_tag=CCO46_19390 NZ_NPOH01000018.1 Protein Homology CDS 97896 98247 . - 0 ID=cds-WP_097363455.1;Parent=gene-CCO46_RS19410;Dbxref=GenBank:WP_097363455.1;Name=WP_097363455.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO46_RS19410;product=IS3-like element ISSen1 family transposase;protein_id=WP_097363455.1;transl_table=11 NZ_NPOH01000018.1 Protein Homology CDS 96992 97896 . - 2 ID=cds-WP_097363455.1;Parent=gene-CCO46_RS19410;Dbxref=GenBank:WP_097363455.1;Name=WP_097363455.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO46_RS19410;product=IS3-like element ISSen1 family transposase;protein_id=WP_097363455.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 98348 98435 . - . ID=gene-CCO46_RS19415;Name=CCO46_RS19415;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS19415;old_locus_tag=CCO46_19395 NZ_NPOH01000018.1 tRNAscan-SE tRNA 98348 98435 . - . ID=rna-CCO46_RS19415;Parent=gene-CCO46_RS19415;anticodon=(pos:complement(98399..98401));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS19415;product=tRNA-Ser NZ_NPOH01000018.1 tRNAscan-SE exon 98348 98435 . - . ID=exon-CCO46_RS19415-1;Parent=rna-CCO46_RS19415;anticodon=(pos:complement(98399..98401));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS19415;product=tRNA-Ser NZ_NPOH01000018.1 RefSeq gene 98584 99261 . - . ID=gene-CCO46_RS19420;Name=CCO46_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19420;old_locus_tag=CCO46_19400 NZ_NPOH01000018.1 Protein Homology CDS 98584 99261 . - 0 ID=cds-WP_000097893.1;Parent=gene-CCO46_RS19420;Dbxref=GenBank:WP_000097893.1;Name=WP_000097893.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=CCO46_RS19420;product=hydrolase;protein_id=WP_000097893.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 99281 100141 . - . ID=gene-CCO46_RS19425;Name=CCO46_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19425;old_locus_tag=CCO46_19405 NZ_NPOH01000018.1 Protein Homology CDS 99281 100141 . - 0 ID=cds-WP_080160641.1;Parent=gene-CCO46_RS19425;Dbxref=GenBank:WP_080160641.1;Name=WP_080160641.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=CCO46_RS19425;product=pirin family protein;protein_id=WP_080160641.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 100250 101161 . + . ID=gene-CCO46_RS19430;Name=CCO46_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19430;old_locus_tag=CCO46_19410 NZ_NPOH01000018.1 Protein Homology CDS 100250 101161 . + 0 ID=cds-WP_000597928.1;Parent=gene-CCO46_RS19430;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=CCO46_RS19430;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 101252 101470 . - . ID=gene-CCO46_RS19435;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CCO46_RS19435;old_locus_tag=CCO46_19415 NZ_NPOH01000018.1 Protein Homology CDS 101252 101470 . - 0 ID=cds-WP_001040187.1;Parent=gene-CCO46_RS19435;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=CCO46_RS19435;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 101782 102486 . - . ID=gene-CCO46_RS19445;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=CCO46_RS19445;old_locus_tag=CCO46_19425 NZ_NPOH01000018.1 Protein Homology CDS 101782 102486 . - 0 ID=cds-WP_061372124.1;Parent=gene-CCO46_RS19445;Dbxref=GenBank:WP_061372124.1;Name=WP_061372124.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=CCO46_RS19445;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_061372124.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 102531 104252 . - . ID=gene-CCO46_RS19450;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=CCO46_RS19450;old_locus_tag=CCO46_19430 NZ_NPOH01000018.1 Protein Homology CDS 102531 104252 . - 0 ID=cds-WP_001202257.1;Parent=gene-CCO46_RS19450;Dbxref=GenBank:WP_001202257.1;Name=WP_001202257.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=CCO46_RS19450;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202257.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 104253 106019 . - . ID=gene-CCO46_RS19455;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=CCO46_RS19455;old_locus_tag=CCO46_19435 NZ_NPOH01000018.1 Protein Homology CDS 104253 106019 . - 0 ID=cds-WP_058331328.1;Parent=gene-CCO46_RS19455;Dbxref=GenBank:WP_058331328.1;Name=WP_058331328.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=CCO46_RS19455;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_058331328.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 106133 107101 . - . ID=gene-CCO46_RS19460;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CCO46_RS19460;old_locus_tag=CCO46_19440 NZ_NPOH01000018.1 Protein Homology CDS 106133 107101 . - 0 ID=cds-WP_000537406.1;Parent=gene-CCO46_RS19460;Dbxref=GenBank:WP_000537406.1;Name=WP_000537406.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=CCO46_RS19460;product=thioredoxin-disulfide reductase;protein_id=WP_000537406.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 107648 108142 . + . ID=gene-CCO46_RS19470;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=CCO46_RS19470;old_locus_tag=CCO46_19450 NZ_NPOH01000018.1 Protein Homology CDS 107648 108142 . + 0 ID=cds-WP_000228469.1;Parent=gene-CCO46_RS19470;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=CCO46_RS19470;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_NPOH01000018.1 RefSeq gene 108277 110724 . + . ID=gene-CCO46_RS19475;Name=ftsK;end_range=110724,.;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=CCO46_RS19475;old_locus_tag=CCO46_19455;partial=true NZ_NPOH01000018.1 Protein Homology CDS 108277 110724 . + 0 ID=cds-WP_097363457.1;Parent=gene-CCO46_RS19475;Dbxref=GenBank:WP_097363457.1;Name=WP_097363457.1;Ontology_term=GO:0003677,GO:0005524;end_range=110724,.;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=CCO46_RS19475;partial=true;product=DNA translocase FtsK;protein_id=WP_097363457.1;transl_table=11 ##sequence-region NZ_NPOH01000019.1 1 104981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000019.1 RefSeq region 1 104981 . + . ID=NZ_NPOH01000019.1:1..104981;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000019.1 RefSeq gene 1 535 . - . ID=gene-CCO46_RS19480;Name=CCO46_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19480;old_locus_tag=CCO46_19460;partial=true;start_range=.,1 NZ_NPOH01000019.1 Protein Homology CDS 1 535 . - 0 ID=cds-WP_272897643.1;Parent=gene-CCO46_RS19480;Dbxref=GenBank:WP_272897643.1;Name=WP_272897643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=CCO46_RS19480;partial=true;product=proton-conducting transporter membrane subunit;protein_id=WP_272897643.1;start_range=.,1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 612 2453 . - . ID=gene-CCO46_RS19485;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=CCO46_RS19485;old_locus_tag=CCO46_19465 NZ_NPOH01000019.1 Protein Homology CDS 612 2453 . - 0 ID=cds-WP_001056579.1;Parent=gene-CCO46_RS19485;Dbxref=GenBank:WP_001056579.1;Name=WP_001056579.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=CCO46_RS19485;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056579.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 2450 2752 . - . ID=gene-CCO46_RS19490;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=CCO46_RS19490;old_locus_tag=CCO46_19470 NZ_NPOH01000019.1 Protein Homology CDS 2450 2752 . - 0 ID=cds-WP_000612687.1;Parent=gene-CCO46_RS19490;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=CCO46_RS19490;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 2749 3303 . - . ID=gene-CCO46_RS19495;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=CCO46_RS19495;old_locus_tag=CCO46_19475 NZ_NPOH01000019.1 Protein Homology CDS 2749 3303 . - 0 ID=cds-WP_000393522.1;Parent=gene-CCO46_RS19495;Dbxref=GenBank:WP_000393522.1;Name=WP_000393522.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=CCO46_RS19495;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 3314 3856 . - . ID=gene-CCO46_RS19500;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=CCO46_RS19500;old_locus_tag=CCO46_19480 NZ_NPOH01000019.1 Protein Homology CDS 3314 3856 . - 0 ID=cds-WP_000172747.1;Parent=gene-CCO46_RS19500;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=CCO46_RS19500;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 3871 4848 . - . ID=gene-CCO46_RS19505;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=CCO46_RS19505;old_locus_tag=CCO46_19485 NZ_NPOH01000019.1 Protein Homology CDS 3871 4848 . - 0 ID=cds-WP_000118515.1;Parent=gene-CCO46_RS19505;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=CCO46_RS19505;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 4845 7571 . - . ID=gene-CCO46_RS19510;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=CCO46_RS19510;old_locus_tag=CCO46_19490 NZ_NPOH01000019.1 Protein Homology CDS 4845 7571 . - 0 ID=cds-WP_001518099.1;Parent=gene-CCO46_RS19510;Dbxref=GenBank:WP_001518099.1;Name=WP_001518099.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=CCO46_RS19510;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001518099.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 7602 8939 . - . ID=gene-CCO46_RS19515;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=CCO46_RS19515;old_locus_tag=CCO46_19495 NZ_NPOH01000019.1 Protein Homology CDS 7602 8939 . - 0 ID=cds-WP_023218371.1;Parent=gene-CCO46_RS19515;Dbxref=GenBank:WP_023218371.1;Name=WP_023218371.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=CCO46_RS19515;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_023218371.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 8936 9436 . - . ID=gene-CCO46_RS19520;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=CCO46_RS19520;old_locus_tag=CCO46_19500 NZ_NPOH01000019.1 Protein Homology CDS 8936 9436 . - 0 ID=cds-WP_000545038.1;Parent=gene-CCO46_RS19520;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=CCO46_RS19520;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 9439 11241 . - . ID=gene-CCO46_RS19525;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=CCO46_RS19525;old_locus_tag=CCO46_19505 NZ_NPOH01000019.1 Protein Homology CDS 9439 11241 . - 0 ID=cds-WP_000247855.1;Parent=gene-CCO46_RS19525;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=CCO46_RS19525;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 11328 11990 . - . ID=gene-CCO46_RS19530;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=CCO46_RS19530;old_locus_tag=CCO46_19510 NZ_NPOH01000019.1 Protein Homology CDS 11328 11990 . - 0 ID=cds-WP_000386728.1;Parent=gene-CCO46_RS19530;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=CCO46_RS19530;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 12006 12449 . - . ID=gene-CCO46_RS19535;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=CCO46_RS19535;old_locus_tag=CCO46_19515 NZ_NPOH01000019.1 Protein Homology CDS 12006 12449 . - 0 ID=cds-WP_000062993.1;Parent=gene-CCO46_RS19535;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=CCO46_RS19535;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 12846 12998 . - . ID=gene-CCO46_RS19540;Name=CCO46_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19540;old_locus_tag=CCO46_19520 NZ_NPOH01000019.1 Protein Homology CDS 12846 12998 . - 0 ID=cds-WP_001121022.1;Parent=gene-CCO46_RS19540;Dbxref=GenBank:WP_001121022.1;Name=WP_001121022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=CCO46_RS19540;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001121022.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 13078 14016 . - . ID=gene-CCO46_RS19545;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=CCO46_RS19545;old_locus_tag=CCO46_19525 NZ_NPOH01000019.1 Protein Homology CDS 13078 14016 . - 0 ID=cds-WP_000606288.1;Parent=gene-CCO46_RS19545;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=CCO46_RS19545;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 14948 16162 . + . ID=gene-CCO46_RS19555;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=CCO46_RS19555;old_locus_tag=CCO46_19535 NZ_NPOH01000019.1 Protein Homology CDS 14948 16162 . + 0 ID=cds-WP_000074540.1;Parent=gene-CCO46_RS19555;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=CCO46_RS19555;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 16256 16855 . + . ID=gene-CCO46_RS19560;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=CCO46_RS19560;old_locus_tag=CCO46_19540 NZ_NPOH01000019.1 Protein Homology CDS 16256 16855 . + 0 ID=cds-WP_000813882.1;Parent=gene-CCO46_RS19560;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=CCO46_RS19560;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 16960 18786 . - . ID=gene-CCO46_RS19565;Name=CCO46_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19565;old_locus_tag=CCO46_19545 NZ_NPOH01000019.1 Protein Homology CDS 16960 18786 . - 0 ID=cds-WP_001012857.1;Parent=gene-CCO46_RS19565;Dbxref=GenBank:WP_001012857.1;Name=WP_001012857.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=CCO46_RS19565;product=SLC13 family permease;protein_id=WP_001012857.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 18863 19540 . - . ID=gene-CCO46_RS19570;Name=CCO46_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19570;old_locus_tag=CCO46_19550 NZ_NPOH01000019.1 Protein Homology CDS 18863 19540 . - 0 ID=cds-WP_001555201.1;Parent=gene-CCO46_RS19570;Dbxref=GenBank:WP_001555201.1;Name=WP_001555201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=CCO46_RS19570;product=sugar phosphatase;protein_id=WP_001555201.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 19533 20027 . - . ID=gene-CCO46_RS19575;Name=CCO46_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19575;old_locus_tag=CCO46_19555 NZ_NPOH01000019.1 Protein Homology CDS 19533 20027 . - 0 ID=cds-WP_000426137.1;Parent=gene-CCO46_RS19575;Dbxref=GenBank:WP_000426137.1;Name=WP_000426137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=CCO46_RS19575;product=YfbU family protein;protein_id=WP_000426137.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 20110 20565 . - . ID=gene-CCO46_RS19580;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=CCO46_RS19580;old_locus_tag=CCO46_19560 NZ_NPOH01000019.1 Protein Homology CDS 20110 20565 . - 0 ID=cds-WP_000106617.1;Parent=gene-CCO46_RS19580;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=CCO46_RS19580;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 20905 22107 . + . ID=gene-CCO46_RS19585;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=CCO46_RS19585;old_locus_tag=CCO46_19565 NZ_NPOH01000019.1 Protein Homology CDS 20905 22107 . + 0 ID=cds-WP_000095692.1;Parent=gene-CCO46_RS19585;Dbxref=GenBank:WP_000095692.1;Name=WP_000095692.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=CCO46_RS19585;product=acetate kinase;protein_id=WP_000095692.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 22184 24328 . + . ID=gene-CCO46_RS19590;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO46_RS19590;old_locus_tag=CCO46_19570 NZ_NPOH01000019.1 Protein Homology CDS 22184 24328 . + 0 ID=cds-WP_000086692.1;Parent=gene-CCO46_RS19590;Dbxref=GenBank:WP_000086692.1;Name=WP_000086692.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=CCO46_RS19590;product=phosphate acetyltransferase;protein_id=WP_000086692.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 24546 26066 . + . ID=gene-CCO46_RS19595;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=CCO46_RS19595;old_locus_tag=CCO46_19575 NZ_NPOH01000019.1 Protein Homology CDS 24546 26066 . + 0 ID=cds-WP_000117932.1;Parent=gene-CCO46_RS19595;Dbxref=GenBank:WP_000117932.1;Name=WP_000117932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=CCO46_RS19595;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117932.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 26115 27068 . - . ID=gene-CCO46_RS19600;Name=CCO46_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19600;old_locus_tag=CCO46_19580 NZ_NPOH01000019.1 Protein Homology CDS 26115 27068 . - 0 ID=cds-WP_000593030.1;Parent=gene-CCO46_RS19600;Dbxref=GenBank:WP_000593030.1;Name=WP_000593030.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=CCO46_RS19600;product=transketolase family protein;protein_id=WP_000593030.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 27061 27891 . - . ID=gene-CCO46_RS19605;Name=CCO46_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19605;old_locus_tag=CCO46_19585 NZ_NPOH01000019.1 Protein Homology CDS 27061 27891 . - 0 ID=cds-WP_001103256.1;Parent=gene-CCO46_RS19605;Dbxref=GenBank:WP_001103256.1;Name=WP_001103256.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=CCO46_RS19605;product=transketolase;protein_id=WP_001103256.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 27888 29279 . - . ID=gene-CCO46_RS19610;Name=CCO46_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19610;old_locus_tag=CCO46_19590 NZ_NPOH01000019.1 Protein Homology CDS 27888 29279 . - 0 ID=cds-WP_001522266.1;Parent=gene-CCO46_RS19610;Dbxref=GenBank:WP_001522266.1;Name=WP_001522266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=CCO46_RS19610;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001522266.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 29300 29572 . - . ID=gene-CCO46_RS19615;Name=CCO46_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19615;old_locus_tag=CCO46_19595 NZ_NPOH01000019.1 Protein Homology CDS 29300 29572 . - 0 ID=cds-WP_000699818.1;Parent=gene-CCO46_RS19615;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=CCO46_RS19615;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 29653 30096 . - . ID=gene-CCO46_RS19620;Name=CCO46_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19620;old_locus_tag=CCO46_19600 NZ_NPOH01000019.1 Protein Homology CDS 29653 30096 . - 0 ID=cds-WP_000901810.1;Parent=gene-CCO46_RS19620;Dbxref=GenBank:WP_000901810.1;Name=WP_000901810.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=CCO46_RS19620;product=PTS sugar transporter subunit IIA;protein_id=WP_000901810.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 30349 31368 . + . ID=gene-CCO46_RS19630;Name=CCO46_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19630;old_locus_tag=CCO46_19610 NZ_NPOH01000019.1 Protein Homology CDS 30349 31368 . + 0 ID=cds-WP_000026949.1;Parent=gene-CCO46_RS19630;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=CCO46_RS19630;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 31374 31928 . - . ID=gene-CCO46_RS19635;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=CCO46_RS19635;old_locus_tag=CCO46_19615 NZ_NPOH01000019.1 Protein Homology CDS 31374 31928 . - 0 ID=cds-WP_000230215.1;Parent=gene-CCO46_RS19635;Dbxref=GenBank:WP_000230215.1;Name=WP_000230215.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=CCO46_RS19635;product=NUDIX hydrolase YfcD;protein_id=WP_000230215.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 31985 32536 . - . ID=gene-CCO46_RS19640;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=CCO46_RS19640;old_locus_tag=CCO46_19620 NZ_NPOH01000019.1 Protein Homology CDS 31985 32536 . - 0 ID=cds-WP_000772458.1;Parent=gene-CCO46_RS19640;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=CCO46_RS19640;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 32592 33236 . - . ID=gene-CCO46_RS19645;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=CCO46_RS19645;old_locus_tag=CCO46_19625 NZ_NPOH01000019.1 Protein Homology CDS 32592 33236 . - 0 ID=cds-WP_097363458.1;Parent=gene-CCO46_RS19645;Dbxref=GenBank:WP_097363458.1;Name=WP_097363458.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=CCO46_RS19645;product=glutathione transferase;protein_id=WP_097363458.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 33379 34026 . + . ID=gene-CCO46_RS19650;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=CCO46_RS19650;old_locus_tag=CCO46_19630 NZ_NPOH01000019.1 Protein Homology CDS 33379 34026 . + 0 ID=cds-WP_000566561.1;Parent=gene-CCO46_RS19650;Dbxref=GenBank:WP_000566561.1;Name=WP_000566561.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=CCO46_RS19650;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566561.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 34152 35045 . + . ID=gene-CCO46_RS19655;Name=CCO46_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19655;old_locus_tag=CCO46_19635 NZ_NPOH01000019.1 Protein Homology CDS 34152 35045 . + 0 ID=cds-WP_001166274.1;Parent=gene-CCO46_RS19655;Dbxref=GenBank:WP_001166274.1;Name=WP_001166274.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=CCO46_RS19655;product=TIGR01777 family oxidoreductase;protein_id=WP_001166274.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 35097 35870 . - . ID=gene-CCO46_RS19660;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=CCO46_RS19660;old_locus_tag=CCO46_19640 NZ_NPOH01000019.1 Protein Homology CDS 35097 35870 . - 0 ID=cds-WP_001293591.1;Parent=gene-CCO46_RS19660;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=CCO46_RS19660;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 35884 36591 . - . ID=gene-CCO46_RS19665;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=CCO46_RS19665;old_locus_tag=CCO46_19645 NZ_NPOH01000019.1 Protein Homology CDS 35884 36591 . - 0 ID=cds-WP_000569771.1;Parent=gene-CCO46_RS19665;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=CCO46_RS19665;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 36588 37274 . - . ID=gene-CCO46_RS19670;Name=CCO46_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19670;old_locus_tag=CCO46_19650 NZ_NPOH01000019.1 Protein Homology CDS 36588 37274 . - 0 ID=cds-WP_000965500.1;Parent=gene-CCO46_RS19670;Dbxref=GenBank:WP_000965500.1;Name=WP_000965500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=CCO46_RS19670;product=histidine ABC transporter permease HisQ;protein_id=WP_000965500.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 37457 38239 . - . ID=gene-CCO46_RS19675;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=CCO46_RS19675;old_locus_tag=CCO46_19655 NZ_NPOH01000019.1 Protein Homology CDS 37457 38239 . - 0 ID=cds-WP_000731868.1;Parent=gene-CCO46_RS19675;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=CCO46_RS19675;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 38477 39259 . - . ID=gene-CCO46_RS19680;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=CCO46_RS19680;old_locus_tag=CCO46_19660 NZ_NPOH01000019.1 Protein Homology CDS 38477 39259 . - 0 ID=cds-WP_000754423.1;Parent=gene-CCO46_RS19680;Dbxref=GenBank:WP_000754423.1;Name=WP_000754423.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=CCO46_RS19680;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754423.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 39548 40117 . - . ID=gene-CCO46_RS19690;Name=CCO46_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19690;old_locus_tag=CCO46_19670 NZ_NPOH01000019.1 Protein Homology CDS 39548 40117 . - 0 ID=cds-WP_000825684.1;Parent=gene-CCO46_RS19690;Dbxref=GenBank:WP_000825684.1;Name=WP_000825684.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=CCO46_RS19690;product=UbiX family flavin prenyltransferase;protein_id=WP_000825684.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 40144 41550 . - . ID=gene-CCO46_RS19695;Name=CCO46_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19695;old_locus_tag=CCO46_19675 NZ_NPOH01000019.1 Protein Homology CDS 40144 41550 . - 0 ID=cds-WP_080198108.1;Parent=gene-CCO46_RS19695;Dbxref=GenBank:WP_080198108.1;Name=WP_080198108.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=CCO46_RS19695;product=amino acid permease;protein_id=WP_080198108.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 41614 42717 . - . ID=gene-CCO46_RS19700;Name=CCO46_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19700;old_locus_tag=CCO46_19680 NZ_NPOH01000019.1 Protein Homology CDS 41614 42717 . - 0 ID=cds-WP_000281907.1;Parent=gene-CCO46_RS19700;Dbxref=GenBank:WP_000281907.1;Name=WP_000281907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=CCO46_RS19700;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281907.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 42719 44140 . - . ID=gene-CCO46_RS19705;Name=CCO46_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19705;old_locus_tag=CCO46_19685 NZ_NPOH01000019.1 Protein Homology CDS 42719 44140 . - 0 ID=cds-WP_000072512.1;Parent=gene-CCO46_RS19705;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=CCO46_RS19705;product=APC family permease;protein_id=WP_000072512.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 44231 45628 . - . ID=gene-CCO46_RS19710;Name=CCO46_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19710;old_locus_tag=CCO46_19690 NZ_NPOH01000019.1 Protein Homology CDS 44231 45628 . - 0 ID=cds-WP_000132306.1;Parent=gene-CCO46_RS19710;Dbxref=GenBank:WP_000132306.1;Name=WP_000132306.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=CCO46_RS19710;product=diaminopimelate decarboxylase family protein;protein_id=WP_000132306.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 45839 47266 . + . ID=gene-CCO46_RS19715;Name=CCO46_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19715;old_locus_tag=CCO46_19695 NZ_NPOH01000019.1 Protein Homology CDS 45839 47266 . + 0 ID=cds-WP_000168925.1;Parent=gene-CCO46_RS19715;Dbxref=GenBank:WP_000168925.1;Name=WP_000168925.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=CCO46_RS19715;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168925.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 47302 48819 . - . ID=gene-CCO46_RS19720;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CCO46_RS19720;old_locus_tag=CCO46_19700 NZ_NPOH01000019.1 Protein Homology CDS 47302 48819 . - 0 ID=cds-WP_000334205.1;Parent=gene-CCO46_RS19720;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=CCO46_RS19720;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 48857 49345 . - . ID=gene-CCO46_RS19725;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=CCO46_RS19725;old_locus_tag=CCO46_19705 NZ_NPOH01000019.1 Protein Homology CDS 48857 49345 . - 0 ID=cds-WP_000262102.1;Parent=gene-CCO46_RS19725;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=CCO46_RS19725;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 49656 50330 . - . ID=gene-CCO46_RS19730;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=CCO46_RS19730;old_locus_tag=CCO46_19710 NZ_NPOH01000019.1 Protein Homology CDS 49656 50330 . - 0 ID=cds-WP_000157037.1;Parent=gene-CCO46_RS19730;Dbxref=GenBank:WP_000157037.1;Name=WP_000157037.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=CCO46_RS19730;product=cell division protein DedD;protein_id=WP_000157037.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 50320 51588 . - . ID=gene-CCO46_RS19735;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=CCO46_RS19735;old_locus_tag=CCO46_19715 NZ_NPOH01000019.1 Protein Homology CDS 50320 51588 . - 0 ID=cds-WP_079944963.1;Parent=gene-CCO46_RS19735;Dbxref=GenBank:WP_079944963.1;Name=WP_079944963.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=CCO46_RS19735;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_079944963.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 51656 52570 . - . ID=gene-CCO46_RS19740;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CCO46_RS19740;old_locus_tag=CCO46_19720 NZ_NPOH01000019.1 Protein Homology CDS 51656 52570 . - 0 ID=cds-WP_000118383.1;Parent=gene-CCO46_RS19740;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=CCO46_RS19740;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 52720 53379 . - . ID=gene-CCO46_RS19745;Name=CCO46_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19745;old_locus_tag=CCO46_19725 NZ_NPOH01000019.1 Protein Homology CDS 52720 53379 . - 0 ID=cds-WP_000364318.1;Parent=gene-CCO46_RS19745;Dbxref=GenBank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=CCO46_RS19745;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 53428 54240 . - . ID=gene-CCO46_RS19750;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CCO46_RS19750;old_locus_tag=CCO46_19730 NZ_NPOH01000019.1 Protein Homology CDS 53428 54240 . - 0 ID=cds-WP_097363459.1;Parent=gene-CCO46_RS19750;Dbxref=GenBank:WP_097363459.1;Name=WP_097363459.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=CCO46_RS19750;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_097363459.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 54240 55253 . - . ID=gene-CCO46_RS19755;Name=CCO46_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19755;old_locus_tag=CCO46_19735 NZ_NPOH01000019.1 Protein Homology CDS 54240 55253 . - 0 ID=cds-WP_097363460.1;Parent=gene-CCO46_RS19755;Dbxref=GenBank:WP_097363460.1;Name=WP_097363460.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=CCO46_RS19755;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_097363460.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 55321 56457 . - . ID=gene-CCO46_RS19760;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=CCO46_RS19760;old_locus_tag=CCO46_19740 NZ_NPOH01000019.1 Protein Homology CDS 55321 56457 . - 0 ID=cds-WP_023201617.1;Parent=gene-CCO46_RS19760;Dbxref=GenBank:WP_023201617.1;Name=WP_023201617.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=CCO46_RS19760;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_023201617.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 56561 57562 . + . ID=gene-CCO46_RS19765;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=CCO46_RS19765;old_locus_tag=CCO46_19745 NZ_NPOH01000019.1 Protein Homology CDS 56561 57562 . + 0 ID=cds-WP_023201616.1;Parent=gene-CCO46_RS19765;Dbxref=GenBank:WP_023201616.1;Name=WP_023201616.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=CCO46_RS19765;product=flagella biosynthesis regulator Flk;protein_id=WP_023201616.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 57559 58737 . - . ID=gene-CCO46_RS19770;Name=CCO46_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19770;old_locus_tag=CCO46_19750 NZ_NPOH01000019.1 Protein Homology CDS 57559 58737 . - 0 ID=cds-WP_097363461.1;Parent=gene-CCO46_RS19770;Dbxref=GenBank:WP_097363461.1;Name=WP_097363461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=CCO46_RS19770;product=MFS transporter;protein_id=WP_097363461.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 58917 59291 . - . ID=gene-CCO46_RS19775;Name=CCO46_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19775;old_locus_tag=CCO46_19755 NZ_NPOH01000019.1 Protein Homology CDS 58917 59291 . - 0 ID=cds-WP_001051266.1;Parent=gene-CCO46_RS19775;Dbxref=GenBank:WP_001051266.1;Name=WP_001051266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=CCO46_RS19775;product=hypothetical protein;protein_id=WP_001051266.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 59464 59712 . + . ID=gene-CCO46_RS19780;Name=CCO46_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19780;old_locus_tag=CCO46_19760 NZ_NPOH01000019.1 Protein Homology CDS 59464 59712 . + 0 ID=cds-WP_000433426.1;Parent=gene-CCO46_RS19780;Dbxref=GenBank:WP_000433426.1;Name=WP_000433426.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=CCO46_RS19780;product=helix-turn-helix domain-containing protein;protein_id=WP_000433426.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 59881 60249 . + . ID=gene-CCO46_RS19785;Name=CCO46_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19785;old_locus_tag=CCO46_19765 NZ_NPOH01000019.1 Protein Homology CDS 59881 60249 . + 0 ID=cds-WP_000118257.1;Parent=gene-CCO46_RS19785;Dbxref=GenBank:WP_000118257.1;Name=WP_000118257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=CCO46_RS19785;product=NlpC/P60 family protein;protein_id=WP_000118257.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 60249 60767 . + . ID=gene-CCO46_RS19790;Name=CCO46_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19790;old_locus_tag=CCO46_19770 NZ_NPOH01000019.1 Protein Homology CDS 60249 60767 . + 0 ID=cds-WP_061372005.1;Parent=gene-CCO46_RS19790;Dbxref=GenBank:WP_061372005.1;Name=WP_061372005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=CCO46_RS19790;product=YbjP/YqhG family protein;protein_id=WP_061372005.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 60834 61490 . - . ID=gene-CCO46_RS19795;Name=CCO46_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19795;old_locus_tag=CCO46_19775 NZ_NPOH01000019.1 Protein Homology CDS 60834 61490 . - 0 ID=cds-WP_001142914.1;Parent=gene-CCO46_RS19795;Dbxref=GenBank:WP_001142914.1;Name=WP_001142914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=CCO46_RS19795;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142914.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 61588 62802 . - . ID=gene-CCO46_RS19800;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=CCO46_RS19800;old_locus_tag=CCO46_19780 NZ_NPOH01000019.1 Protein Homology CDS 61588 62802 . - 0 ID=cds-WP_000817161.1;Parent=gene-CCO46_RS19800;Dbxref=GenBank:WP_000817161.1;Name=WP_000817161.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=CCO46_RS19800;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817161.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 62962 64962 . + . ID=gene-CCO46_RS19805;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=CCO46_RS19805;old_locus_tag=CCO46_19785 NZ_NPOH01000019.1 Protein Homology CDS 62962 64962 . + 0 ID=cds-WP_170947418.1;Parent=gene-CCO46_RS19805;Dbxref=GenBank:WP_170947418.1;Name=WP_170947418.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=CCO46_RS19805;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_170947418.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 65014 65289 . - . ID=gene-CCO46_RS19810;Name=CCO46_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19810;old_locus_tag=CCO46_19790 NZ_NPOH01000019.1 Protein Homology CDS 65014 65289 . - 0 ID=cds-WP_000559749.1;Parent=gene-CCO46_RS19810;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=CCO46_RS19810;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 65322 65870 . - . ID=gene-CCO46_RS19815;Name=CCO46_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19815;old_locus_tag=CCO46_19795 NZ_NPOH01000019.1 Protein Homology CDS 65322 65870 . - 0 ID=cds-WP_001089211.1;Parent=gene-CCO46_RS19815;Dbxref=GenBank:WP_001089211.1;Name=WP_001089211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=CCO46_RS19815;product=elongation factor P hydroxylase;protein_id=WP_001089211.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 65870 66679 . - . ID=gene-CCO46_RS19820;Name=CCO46_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19820;old_locus_tag=CCO46_19800 NZ_NPOH01000019.1 Protein Homology CDS 65870 66679 . - 0 ID=cds-WP_000368599.1;Parent=gene-CCO46_RS19820;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=CCO46_RS19820;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 66679 67503 . - . ID=gene-CCO46_RS19825;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=CCO46_RS19825;old_locus_tag=CCO46_19805 NZ_NPOH01000019.1 Protein Homology CDS 66679 67503 . - 0 ID=cds-WP_000750429.1;Parent=gene-CCO46_RS19825;Dbxref=GenBank:WP_000750429.1;Name=WP_000750429.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=CCO46_RS19825;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750429.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 67507 68592 . - . ID=gene-CCO46_RS19830;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CCO46_RS19830;old_locus_tag=CCO46_19810 NZ_NPOH01000019.1 Protein Homology CDS 67507 68592 . - 0 ID=cds-WP_097363463.1;Parent=gene-CCO46_RS19830;Dbxref=GenBank:WP_097363463.1;Name=WP_097363463.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=CCO46_RS19830;product=chorismate synthase;protein_id=WP_097363463.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 68628 69560 . - . ID=gene-CCO46_RS19835;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=CCO46_RS19835;old_locus_tag=CCO46_19815 NZ_NPOH01000019.1 Protein Homology CDS 68628 69560 . - 0 ID=cds-WP_001542329.1;Parent=gene-CCO46_RS19835;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=CCO46_RS19835;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 69726 70277 . + . ID=gene-CCO46_RS19840;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=CCO46_RS19840;old_locus_tag=CCO46_19820 NZ_NPOH01000019.1 Protein Homology CDS 69726 70277 . + 0 ID=cds-WP_000730794.1;Parent=gene-CCO46_RS19840;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=CCO46_RS19840;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 70377 70862 . - . ID=gene-CCO46_RS19845;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=CCO46_RS19845;old_locus_tag=CCO46_19825 NZ_NPOH01000019.1 Protein Homology CDS 70377 70862 . - 0 ID=cds-WP_001195801.1;Parent=gene-CCO46_RS19845;Dbxref=GenBank:WP_001195801.1;Name=WP_001195801.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=CCO46_RS19845;product=phosphohistidine phosphatase SixA;protein_id=WP_001195801.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 71071 73218 . - . ID=gene-CCO46_RS19850;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=CCO46_RS19850;old_locus_tag=CCO46_19830 NZ_NPOH01000019.1 Protein Homology CDS 71071 73218 . - 0 ID=cds-WP_097363464.1;Parent=gene-CCO46_RS19850;Dbxref=GenBank:WP_097363464.1;Name=WP_097363464.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=CCO46_RS19850;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_097363464.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 73218 74528 . - . ID=gene-CCO46_RS19855;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=CCO46_RS19855;old_locus_tag=CCO46_19835 NZ_NPOH01000019.1 Protein Homology CDS 73218 74528 . - 0 ID=cds-WP_001248133.1;Parent=gene-CCO46_RS19855;Dbxref=GenBank:WP_001248133.1;Name=WP_001248133.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=CCO46_RS19855;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_001248133.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 74706 74990 . - . ID=gene-CCO46_RS19860;Name=CCO46_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19860;old_locus_tag=CCO46_19840 NZ_NPOH01000019.1 Protein Homology CDS 74706 74990 . - 0 ID=cds-WP_000030904.1;Parent=gene-CCO46_RS19860;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=CCO46_RS19860;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 75361 76668 . + . ID=gene-CCO46_RS19865;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=CCO46_RS19865;old_locus_tag=CCO46_19845 NZ_NPOH01000019.1 Protein Homology CDS 75361 76668 . + 0 ID=cds-WP_001518618.1;Parent=gene-CCO46_RS19865;Dbxref=GenBank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=CCO46_RS19865;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 76729 77484 . - . ID=gene-CCO46_RS19870;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=CCO46_RS19870;old_locus_tag=CCO46_19850 NZ_NPOH01000019.1 Protein Homology CDS 76729 77484 . - 0 ID=cds-WP_000776787.1;Parent=gene-CCO46_RS19870;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=CCO46_RS19870;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 77773 78714 . + . ID=gene-CCO46_RS19875;Name=CCO46_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19875;old_locus_tag=CCO46_19855 NZ_NPOH01000019.1 Protein Homology CDS 77773 78714 . + 0 ID=cds-WP_000377772.1;Parent=gene-CCO46_RS19875;Dbxref=GenBank:WP_000377772.1;Name=WP_000377772.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=CCO46_RS19875;product=formate/nitrite transporter family protein;protein_id=WP_000377772.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 78790 78864 . + . ID=gene-CCO46_RS19880;Name=CCO46_RS19880;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS19880;old_locus_tag=CCO46_19860 NZ_NPOH01000019.1 tRNAscan-SE tRNA 78790 78864 . + . ID=rna-CCO46_RS19880;Parent=gene-CCO46_RS19880;anticodon=(pos:78823..78825);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS19880;product=tRNA-Arg NZ_NPOH01000019.1 tRNAscan-SE exon 78790 78864 . + . ID=exon-CCO46_RS19880-1;Parent=rna-CCO46_RS19880;anticodon=(pos:78823..78825);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS19880;product=tRNA-Arg NZ_NPOH01000019.1 RefSeq gene 79021 79959 . - . ID=gene-CCO46_RS19885;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=CCO46_RS19885;old_locus_tag=CCO46_19865 NZ_NPOH01000019.1 Protein Homology CDS 79021 79959 . - 0 ID=cds-WP_000716001.1;Parent=gene-CCO46_RS19885;Dbxref=GenBank:WP_000716001.1;Name=WP_000716001.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=CCO46_RS19885;product=omptin family outer membrane protease PgtE;protein_id=WP_000716001.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 80227 81474 . - . ID=gene-CCO46_RS19890;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=CCO46_RS19890;old_locus_tag=CCO46_19870 NZ_NPOH01000019.1 Protein Homology CDS 80227 81474 . - 0 ID=cds-WP_000930845.1;Parent=gene-CCO46_RS19890;Dbxref=GenBank:WP_000930845.1;Name=WP_000930845.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=CCO46_RS19890;product=two-component system response regulator PgtA;protein_id=WP_000930845.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 81464 83470 . - . ID=gene-CCO46_RS19895;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=CCO46_RS19895;old_locus_tag=CCO46_19875 NZ_NPOH01000019.1 Protein Homology CDS 81464 83470 . - 0 ID=cds-WP_000678493.1;Parent=gene-CCO46_RS19895;Dbxref=GenBank:WP_000678493.1;Name=WP_000678493.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=CCO46_RS19895;product=two-component system sensor histidine kinase PgtB;protein_id=WP_000678493.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 83467 84660 . - . ID=gene-CCO46_RS19900;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=CCO46_RS19900;old_locus_tag=CCO46_19880 NZ_NPOH01000019.1 Protein Homology CDS 83467 84660 . - 0 ID=cds-WP_000467983.1;Parent=gene-CCO46_RS19900;Dbxref=GenBank:WP_000467983.1;Name=WP_000467983.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=CCO46_RS19900;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467983.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 85096 86487 . + . ID=gene-CCO46_RS19910;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=CCO46_RS19910;old_locus_tag=CCO46_19890 NZ_NPOH01000019.1 Protein Homology CDS 85096 86487 . + 0 ID=cds-WP_000955735.1;Parent=gene-CCO46_RS19910;Dbxref=GenBank:WP_000955735.1;Name=WP_000955735.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=CCO46_RS19910;product=phosphoglycerate transporter PgtP;protein_id=WP_000955735.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 86762 87004 . - . ID=gene-CCO46_RS19920;Name=CCO46_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19920;old_locus_tag=CCO46_19900 NZ_NPOH01000019.1 Protein Homology CDS 86762 87004 . - 0 ID=cds-WP_000639889.1;Parent=gene-CCO46_RS19920;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=CCO46_RS19920;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 87526 88446 . + . ID=gene-CCO46_RS19925;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=CCO46_RS19925;old_locus_tag=CCO46_19905 NZ_NPOH01000019.1 Protein Homology CDS 87526 88446 . + 0 ID=cds-WP_000484431.1;Parent=gene-CCO46_RS19925;Dbxref=GenBank:WP_000484431.1;Name=WP_000484431.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=CCO46_RS19925;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484431.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 88849 88920 . + . ID=gene-CCO46_RS25005;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=CCO46_RS25005;old_locus_tag=CCO46_19910 NZ_NPOH01000019.1 Protein Homology CDS 88849 88920 . + 0 ID=cds-WP_010723117.1;Parent=gene-CCO46_RS25005;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=CCO46_RS25005;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 88970 90208 . - . ID=gene-CCO46_RS19930;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=CCO46_RS19930;old_locus_tag=CCO46_19915 NZ_NPOH01000019.1 Protein Homology CDS 88970 90208 . - 0 ID=cds-WP_000763118.1;Parent=gene-CCO46_RS19930;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=CCO46_RS19930;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 90929 91894 . - . ID=gene-CCO46_RS19940;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=CCO46_RS19940;old_locus_tag=CCO46_19925 NZ_NPOH01000019.1 Protein Homology CDS 90929 91894 . - 0 ID=cds-WP_000170380.1;Parent=gene-CCO46_RS19940;Dbxref=GenBank:WP_000170380.1;Name=WP_000170380.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=CCO46_RS19940;product=glucokinase;protein_id=WP_000170380.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 92098 93333 . + . ID=gene-CCO46_RS19945;Name=CCO46_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19945;old_locus_tag=CCO46_19930 NZ_NPOH01000019.1 Protein Homology CDS 92098 93333 . + 0 ID=cds-WP_000468922.1;Parent=gene-CCO46_RS19945;Dbxref=GenBank:WP_000468922.1;Name=WP_000468922.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=CCO46_RS19945;product=ion channel protein;protein_id=WP_000468922.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 93353 95005 . - . ID=gene-CCO46_RS19950;Name=CCO46_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19950;old_locus_tag=CCO46_19935 NZ_NPOH01000019.1 Protein Homology CDS 93353 95005 . - 0 ID=cds-WP_097363465.1;Parent=gene-CCO46_RS19950;Dbxref=GenBank:WP_097363465.1;Name=WP_097363465.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=CCO46_RS19950;product=alpha-keto acid decarboxylase family protein;protein_id=WP_097363465.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 95185 96183 . + . ID=gene-CCO46_RS19955;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CCO46_RS19955;old_locus_tag=CCO46_19940 NZ_NPOH01000019.1 Protein Homology CDS 95185 96183 . + 0 ID=cds-WP_058331740.1;Parent=gene-CCO46_RS19955;Dbxref=GenBank:WP_058331740.1;Name=WP_058331740.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=CCO46_RS19955;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_058331740.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 96297 96623 . + . ID=gene-CCO46_RS19960;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=CCO46_RS19960;old_locus_tag=CCO46_19945 NZ_NPOH01000019.1 Protein Homology CDS 96297 96623 . + 0 ID=cds-WP_000490096.1;Parent=gene-CCO46_RS19960;Dbxref=GenBank:WP_000490096.1;Name=WP_000490096.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=CCO46_RS19960;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490096.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 96684 97925 . - . ID=gene-CCO46_RS19965;Name=CCO46_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19965;old_locus_tag=CCO46_19950 NZ_NPOH01000019.1 Protein Homology CDS 96684 97925 . - 0 ID=cds-WP_000131734.1;Parent=gene-CCO46_RS19965;Dbxref=GenBank:WP_000131734.1;Name=WP_000131734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=CCO46_RS19965;product=Nramp family divalent metal transporter;protein_id=WP_000131734.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 97918 97995 . - . ID=gene-CCO46_RS25900;Name=CCO46_RS25900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25900 NZ_NPOH01000019.1 Protein Homology CDS 97918 97995 . - 0 ID=cds-WP_418144572.1;Parent=gene-CCO46_RS25900;Dbxref=GenBank:WP_418144572.1;Name=WP_418144572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=CCO46_RS25900;product=hypothetical protein;protein_id=WP_418144572.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 98268 99470 . + . ID=gene-CCO46_RS19970;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=CCO46_RS19970;old_locus_tag=CCO46_19955 NZ_NPOH01000019.1 Protein Homology CDS 98268 99470 . + 0 ID=cds-WP_000376343.1;Parent=gene-CCO46_RS19970;Dbxref=GenBank:WP_000376343.1;Name=WP_000376343.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=CCO46_RS19970;product=nucleoside permease NupC;protein_id=WP_000376343.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 99523 101712 . - . ID=gene-CCO46_RS19975;Name=CCO46_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19975;old_locus_tag=CCO46_19960 NZ_NPOH01000019.1 Protein Homology CDS 99523 101712 . - 0 ID=cds-WP_001112941.1;Parent=gene-CCO46_RS19975;Dbxref=GenBank:WP_001112941.1;Name=WP_001112941.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=CCO46_RS19975;product=EAL domain-containing protein;protein_id=WP_001112941.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 101903 101978 . - . ID=gene-CCO46_RS19980;Name=CCO46_RS19980;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS19980;old_locus_tag=CCO46_19965 NZ_NPOH01000019.1 tRNAscan-SE tRNA 101903 101978 . - . ID=rna-CCO46_RS19980;Parent=gene-CCO46_RS19980;anticodon=(pos:complement(101943..101945));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS19980;product=tRNA-Ala NZ_NPOH01000019.1 tRNAscan-SE exon 101903 101978 . - . ID=exon-CCO46_RS19980-1;Parent=rna-CCO46_RS19980;anticodon=(pos:complement(101943..101945));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS19980;product=tRNA-Ala NZ_NPOH01000019.1 RefSeq gene 102021 102096 . - . ID=gene-CCO46_RS19985;Name=CCO46_RS19985;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS19985;old_locus_tag=CCO46_19970 NZ_NPOH01000019.1 tRNAscan-SE tRNA 102021 102096 . - . ID=rna-CCO46_RS19985;Parent=gene-CCO46_RS19985;anticodon=(pos:complement(102061..102063));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS19985;product=tRNA-Ala NZ_NPOH01000019.1 tRNAscan-SE exon 102021 102096 . - . ID=exon-CCO46_RS19985-1;Parent=rna-CCO46_RS19985;anticodon=(pos:complement(102061..102063));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS19985;product=tRNA-Ala NZ_NPOH01000019.1 RefSeq gene 102318 102680 . + . ID=gene-CCO46_RS19995;Name=CCO46_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS19995;old_locus_tag=CCO46_19980 NZ_NPOH01000019.1 Protein Homology CDS 102318 102680 . + 0 ID=cds-WP_000472034.1;Parent=gene-CCO46_RS19995;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=CCO46_RS19995;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 102682 103074 . + . ID=gene-CCO46_RS20000;Name=CCO46_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20000;old_locus_tag=CCO46_19985 NZ_NPOH01000019.1 Protein Homology CDS 102682 103074 . + 0 ID=cds-WP_000826514.1;Parent=gene-CCO46_RS20000;Dbxref=GenBank:WP_000826514.1;Name=WP_000826514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=CCO46_RS20000;product=MerR family transcriptional regulator;protein_id=WP_000826514.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 103128 104543 . - . ID=gene-CCO46_RS20005;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CCO46_RS20005;old_locus_tag=CCO46_19990 NZ_NPOH01000019.1 Protein Homology CDS 103128 104543 . - 0 ID=cds-WP_000695623.1;Parent=gene-CCO46_RS20005;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=CCO46_RS20005;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11 NZ_NPOH01000019.1 RefSeq gene 104802 104877 . + . ID=gene-CCO46_RS20010;Name=CCO46_RS20010;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS20010;old_locus_tag=CCO46_19995 NZ_NPOH01000019.1 tRNAscan-SE tRNA 104802 104877 . + . ID=rna-CCO46_RS20010;Parent=gene-CCO46_RS20010;anticodon=(pos:104835..104837);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS20010;product=tRNA-Val NZ_NPOH01000019.1 tRNAscan-SE exon 104802 104877 . + . ID=exon-CCO46_RS20010-1;Parent=rna-CCO46_RS20010;anticodon=(pos:104835..104837);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS20010;product=tRNA-Val ##sequence-region NZ_NPOH01000002.1 1 352121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000002.1 RefSeq region 1 352121 . + . ID=NZ_NPOH01000002.1:1..352121;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000002.1 RefSeq gene 1 1099 . - . ID=gene-CCO46_RS02855;Name=CCO46_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02855;old_locus_tag=CCO46_02855;partial=true;start_range=.,1 NZ_NPOH01000002.1 Protein Homology CDS 1 1099 . - 0 ID=cds-WP_140439309.1;Parent=gene-CCO46_RS02855;Dbxref=GenBank:WP_140439309.1;Name=WP_140439309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=CCO46_RS02855;partial=true;product=phage late control D family protein;protein_id=WP_140439309.1;start_range=.,1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 1496 2017 . - . ID=gene-CCO46_RS02865;Name=CCO46_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02865;old_locus_tag=CCO46_02865 NZ_NPOH01000002.1 Protein Homology CDS 1496 2017 . - 0 ID=cds-WP_000968384.1;Parent=gene-CCO46_RS02865;Dbxref=GenBank:WP_000968384.1;Name=WP_000968384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=CCO46_RS02865;product=DUF2778 domain-containing protein;protein_id=WP_000968384.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 2041 2457 . - . ID=gene-CCO46_RS02870;Name=CCO46_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02870;old_locus_tag=CCO46_02870 NZ_NPOH01000002.1 Protein Homology CDS 2041 2457 . - 0 ID=cds-WP_001596567.1;Parent=gene-CCO46_RS02870;Dbxref=GenBank:WP_001596567.1;Name=WP_001596567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=CCO46_RS02870;product=DUF2195 family protein;protein_id=WP_001596567.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 2710 3087 . - . ID=gene-CCO46_RS02875;Name=CCO46_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02875;old_locus_tag=CCO46_02875 NZ_NPOH01000002.1 Protein Homology CDS 2710 3087 . - 0 ID=cds-WP_023214856.1;Parent=gene-CCO46_RS02875;Dbxref=GenBank:WP_023214856.1;Name=WP_023214856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289912.1;locus_tag=CCO46_RS02875;product=Imm50 family immunity protein;protein_id=WP_023214856.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 3098 3328 . - . ID=gene-CCO46_RS02880;Name=CCO46_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02880;old_locus_tag=CCO46_02880 NZ_NPOH01000002.1 Protein Homology CDS 3098 3328 . - 0 ID=cds-WP_097363222.1;Parent=gene-CCO46_RS02880;Dbxref=GenBank:WP_097363222.1;Name=WP_097363222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026993.6;locus_tag=CCO46_RS02880;product=HNH/endonuclease VII fold putative polymorphic toxin;protein_id=WP_097363222.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 3393 4529 . - . ID=gene-CCO46_RS02885;Name=CCO46_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02885;old_locus_tag=CCO46_02885 NZ_NPOH01000002.1 Protein Homology CDS 3393 4529 . - 0 ID=cds-WP_058331205.1;Parent=gene-CCO46_RS02885;Dbxref=GenBank:WP_058331205.1;Name=WP_058331205.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=CCO46_RS02885;product=ISAs1 family transposase;protein_id=WP_058331205.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 5046 5921 . - . ID=gene-CCO46_RS02890;Name=CCO46_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02890;old_locus_tag=CCO46_02890 NZ_NPOH01000002.1 Protein Homology CDS 5046 5921 . - 0 ID=cds-WP_097363223.1;Parent=gene-CCO46_RS02890;Dbxref=GenBank:WP_097363223.1;Name=WP_097363223.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=CCO46_RS02890;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=WP_097363223.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 6274 6696 . - . ID=gene-CCO46_RS02895;Name=CCO46_RS02895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS02895;old_locus_tag=CCO46_02895;pseudo=true NZ_NPOH01000002.1 Protein Homology CDS 6274 6696 . - 0 ID=cds-CCO46_RS02895;Parent=gene-CCO46_RS02895;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000941934.1;locus_tag=CCO46_RS02895;product=FosA7 family fosfomycin resistance glutathione transferase;pseudo=true;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 6819 8115 . + . ID=gene-CCO46_RS02900;Name=CCO46_RS02900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS02900;old_locus_tag=CCO46_02900;pseudo=true NZ_NPOH01000002.1 Protein Homology CDS 6819 8115 . + 0 ID=cds-CCO46_RS02900;Parent=gene-CCO46_RS02900;Note=frameshifted;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001121878.1;locus_tag=CCO46_RS02900;product=Fic family protein;pseudo=true;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 8239 9447 . + . ID=gene-CCO46_RS02905;Name=CCO46_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02905;old_locus_tag=CCO46_02905 NZ_NPOH01000002.1 Protein Homology CDS 8239 9447 . + 0 ID=cds-WP_080160322.1;Parent=gene-CCO46_RS02905;Dbxref=GenBank:WP_080160322.1;Name=WP_080160322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000015681.1;locus_tag=CCO46_RS02905;product=type II restriction endonuclease;protein_id=WP_080160322.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 9490 10914 . - . ID=gene-CCO46_RS02910;Name=CCO46_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02910;old_locus_tag=CCO46_02910 NZ_NPOH01000002.1 Protein Homology CDS 9490 10914 . - 0 ID=cds-WP_080160323.1;Parent=gene-CCO46_RS02910;Dbxref=GenBank:WP_080160323.1;Name=WP_080160323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134251.1;locus_tag=CCO46_RS02910;product=DNA cytosine methyltransferase;protein_id=WP_080160323.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 11207 14722 . - . ID=gene-CCO46_RS02915;Name=CCO46_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02915;old_locus_tag=CCO46_02915 NZ_NPOH01000002.1 Protein Homology CDS 11207 14722 . - 0 ID=cds-WP_080160324.1;Parent=gene-CCO46_RS02915;Dbxref=GenBank:WP_080160324.1;Name=WP_080160324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=CCO46_RS02915;product=AAA domain-containing protein;protein_id=WP_080160324.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 15084 15354 . - . ID=gene-CCO46_RS25375;Name=CCO46_RS25375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25375;partial=true;pseudo=true;start_range=.,15084 NZ_NPOH01000002.1 Protein Homology CDS 15084 15354 . - 0 ID=cds-CCO46_RS25375;Parent=gene-CCO46_RS25375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=CCO46_RS25375;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,15084;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 15786 16094 . - . ID=gene-CCO46_RS02925;Name=CCO46_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02925;old_locus_tag=CCO46_02925 NZ_NPOH01000002.1 Protein Homology CDS 15786 16094 . - 0 ID=cds-WP_097363224.1;Parent=gene-CCO46_RS02925;Dbxref=GenBank:WP_097363224.1;Name=WP_097363224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=CCO46_RS02925;product=CcdB family protein;protein_id=WP_097363224.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 16097 16336 . - . ID=gene-CCO46_RS02930;Name=CCO46_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02930;old_locus_tag=CCO46_02930 NZ_NPOH01000002.1 Protein Homology CDS 16097 16336 . - 0 ID=cds-WP_001118105.1;Parent=gene-CCO46_RS02930;Dbxref=GenBank:WP_001118105.1;Name=WP_001118105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=CCO46_RS02930;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_001118105.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 16445 16669 . - . ID=gene-CCO46_RS02935;Name=CCO46_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02935;old_locus_tag=CCO46_02935 NZ_NPOH01000002.1 Protein Homology CDS 16445 16669 . - 0 ID=cds-WP_094887716.1;Parent=gene-CCO46_RS02935;Dbxref=GenBank:WP_094887716.1;Name=WP_094887716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168389.1;locus_tag=CCO46_RS02935;product=CopG family ribbon-helix-helix protein;protein_id=WP_094887716.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 16770 17315 . - . ID=gene-CCO46_RS02940;Name=CCO46_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS02940;old_locus_tag=CCO46_02940 NZ_NPOH01000002.1 Protein Homology CDS 16770 17315 . - 0 ID=cds-WP_373270785.1;Parent=gene-CCO46_RS02940;Dbxref=GenBank:WP_373270785.1;Name=WP_373270785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=CCO46_RS02940;product=DUF4942 domain-containing protein;protein_id=WP_373270785.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 17766 17850 . - . ID=gene-CCO46_RS02950;Name=CCO46_RS02950;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS02950;old_locus_tag=CCO46_02950 NZ_NPOH01000002.1 tRNAscan-SE tRNA 17766 17850 . - . ID=rna-CCO46_RS02950;Parent=gene-CCO46_RS02950;anticodon=(pos:complement(17814..17816));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS02950;product=tRNA-Leu NZ_NPOH01000002.1 tRNAscan-SE exon 17766 17850 . - . ID=exon-CCO46_RS02950-1;Parent=rna-CCO46_RS02950;anticodon=(pos:complement(17814..17816));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS02950;product=tRNA-Leu NZ_NPOH01000002.1 RefSeq gene 18073 19092 . + . ID=gene-CCO46_RS02955;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=CCO46_RS02955;old_locus_tag=CCO46_02955 NZ_NPOH01000002.1 Protein Homology CDS 18073 19092 . + 0 ID=cds-WP_000152563.1;Parent=gene-CCO46_RS02955;Dbxref=GenBank:WP_000152563.1;Name=WP_000152563.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=CCO46_RS02955;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000152563.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 19120 19650 . - . ID=gene-CCO46_RS02960;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=CCO46_RS02960;old_locus_tag=CCO46_02960 NZ_NPOH01000002.1 Protein Homology CDS 19120 19650 . - 0 ID=cds-WP_080160325.1;Parent=gene-CCO46_RS02960;Dbxref=GenBank:WP_080160325.1;Name=WP_080160325.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=CCO46_RS02960;product=gluconokinase;protein_id=WP_080160325.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 19867 20898 . + . ID=gene-CCO46_RS02965;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=CCO46_RS02965;old_locus_tag=CCO46_02965 NZ_NPOH01000002.1 Protein Homology CDS 19867 20898 . + 0 ID=cds-WP_000453360.1;Parent=gene-CCO46_RS02965;Dbxref=GenBank:WP_000453360.1;Name=WP_000453360.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=CCO46_RS02965;product=L-idonate 5-dehydrogenase;protein_id=WP_000453360.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 20923 21687 . + . ID=gene-CCO46_RS02970;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=CCO46_RS02970;old_locus_tag=CCO46_02970 NZ_NPOH01000002.1 Protein Homology CDS 20923 21687 . + 0 ID=cds-WP_000998683.1;Parent=gene-CCO46_RS02970;Dbxref=GenBank:WP_000998683.1;Name=WP_000998683.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=CCO46_RS02970;product=gluconate 5-dehydrogenase;protein_id=WP_000998683.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 21749 23068 . + . ID=gene-CCO46_RS02975;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=CCO46_RS02975;old_locus_tag=CCO46_02975 NZ_NPOH01000002.1 Protein Homology CDS 21749 23068 . + 0 ID=cds-WP_001128356.1;Parent=gene-CCO46_RS02975;Dbxref=GenBank:WP_001128356.1;Name=WP_001128356.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=CCO46_RS02975;product=gnt-II system L-idonate transporter;protein_id=WP_001128356.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 23132 24130 . + . ID=gene-CCO46_RS02980;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=CCO46_RS02980;old_locus_tag=CCO46_02980 NZ_NPOH01000002.1 Protein Homology CDS 23132 24130 . + 0 ID=cds-WP_001244065.1;Parent=gene-CCO46_RS02980;Dbxref=GenBank:WP_001244065.1;Name=WP_001244065.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=CCO46_RS02980;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244065.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 24326 25408 . - . ID=gene-CCO46_RS02985;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=CCO46_RS02985;old_locus_tag=CCO46_02985 NZ_NPOH01000002.1 Protein Homology CDS 24326 25408 . - 0 ID=cds-WP_001182242.1;Parent=gene-CCO46_RS02985;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=CCO46_RS02985;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 25408 26508 . - . ID=gene-CCO46_RS02990;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=CCO46_RS02990;old_locus_tag=CCO46_02990 NZ_NPOH01000002.1 Protein Homology CDS 25408 26508 . - 0 ID=cds-WP_000584132.1;Parent=gene-CCO46_RS02990;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=CCO46_RS02990;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 26572 26622 . - . ID=gene-CCO46_RS25385;Name=CCO46_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25385 NZ_NPOH01000002.1 Protein Homology CDS 26572 26622 . - 0 ID=cds-WP_212724070.1;Parent=gene-CCO46_RS25385;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=CCO46_RS25385;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 26903 28414 . + . ID=gene-CCO46_RS03005;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=CCO46_RS03005;old_locus_tag=CCO46_03005 NZ_NPOH01000002.1 Protein Homology CDS 26903 28414 . + 0 ID=cds-WP_000397158.1;Parent=gene-CCO46_RS03005;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=CCO46_RS03005;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 28551 28994 . + . ID=gene-CCO46_RS03010;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=CCO46_RS03010;old_locus_tag=CCO46_03010 NZ_NPOH01000002.1 Protein Homology CDS 28551 28994 . + 0 ID=cds-WP_001523689.1;Parent=gene-CCO46_RS03010;Dbxref=GenBank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=CCO46_RS03010;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 28994 31849 . + . ID=gene-CCO46_RS03015;Name=CCO46_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03015;old_locus_tag=CCO46_03015 NZ_NPOH01000002.1 Protein Homology CDS 28994 31849 . + 0 ID=cds-WP_097363225.1;Parent=gene-CCO46_RS03015;Dbxref=GenBank:WP_097363225.1;Name=WP_097363225.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=CCO46_RS03015;product=valine--tRNA ligase;protein_id=WP_097363225.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 31991 33178 . - . ID=gene-CCO46_RS03020;Name=CCO46_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03020;old_locus_tag=CCO46_03020 NZ_NPOH01000002.1 Protein Homology CDS 31991 33178 . - 0 ID=cds-WP_001534452.1;Parent=gene-CCO46_RS03020;Dbxref=GenBank:WP_001534452.1;Name=WP_001534452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=CCO46_RS03020;product=YjgN family protein;protein_id=WP_001534452.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 33373 33876 . + . ID=gene-CCO46_RS03025;Name=CCO46_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03025;old_locus_tag=CCO46_03025 NZ_NPOH01000002.1 Protein Homology CDS 33373 33876 . + 0 ID=cds-WP_001519079.1;Parent=gene-CCO46_RS03025;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=CCO46_RS03025;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 33983 34471 . + . ID=gene-CCO46_RS03030;Name=CCO46_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03030;old_locus_tag=CCO46_03030 NZ_NPOH01000002.1 Protein Homology CDS 33983 34471 . + 0 ID=cds-WP_000826193.1;Parent=gene-CCO46_RS03030;Dbxref=GenBank:WP_000826193.1;Name=WP_000826193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=CCO46_RS03030;product=DUF3617 domain-containing protein;protein_id=WP_000826193.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 34705 35517 . - . ID=gene-CCO46_RS03035;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=CCO46_RS03035;old_locus_tag=CCO46_03035 NZ_NPOH01000002.1 Protein Homology CDS 34705 35517 . - 0 ID=cds-WP_000218452.1;Parent=gene-CCO46_RS03035;Dbxref=GenBank:WP_000218452.1;Name=WP_000218452.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=CCO46_RS03035;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_000218452.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 35529 35945 . - . ID=gene-CCO46_RS03040;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=CCO46_RS03040;old_locus_tag=CCO46_03040 NZ_NPOH01000002.1 Protein Homology CDS 35529 35945 . - 0 ID=cds-WP_000002940.1;Parent=gene-CCO46_RS03040;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=CCO46_RS03040;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 36046 36141 . + . ID=gene-CCO46_RS25795;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=CCO46_RS25795 NZ_NPOH01000002.1 Protein Homology CDS 36046 36141 . + 0 ID=cds-WP_223148976.1;Parent=gene-CCO46_RS25795;Dbxref=GenBank:WP_223148976.1;Name=WP_223148976.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=CCO46_RS25795;product=putative translational regulatory protein ArgL;protein_id=WP_223148976.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 36111 37115 . + . ID=gene-CCO46_RS03045;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO46_RS03045;old_locus_tag=CCO46_03045 NZ_NPOH01000002.1 Protein Homology CDS 36111 37115 . + 0 ID=cds-WP_000103041.1;Parent=gene-CCO46_RS03045;Dbxref=GenBank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=CCO46_RS03045;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 37189 37641 . - . ID=gene-CCO46_RS03050;Name=CCO46_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03050;old_locus_tag=CCO46_03050 NZ_NPOH01000002.1 Protein Homology CDS 37189 37641 . - 0 ID=cds-WP_001647361.1;Parent=gene-CCO46_RS03050;Dbxref=GenBank:WP_001647361.1;Name=WP_001647361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=CCO46_RS03050;product=YhcH/YjgK/YiaL family protein;protein_id=WP_001647361.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 38317 39537 . + . ID=gene-CCO46_RS03065;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO46_RS03065;old_locus_tag=CCO46_03065 NZ_NPOH01000002.1 Protein Homology CDS 38317 39537 . + 0 ID=cds-WP_080160328.1;Parent=gene-CCO46_RS03065;Dbxref=GenBank:WP_080160328.1;Name=WP_080160328.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=CCO46_RS03065;product=arginine deiminase;protein_id=WP_080160328.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 39548 40480 . + . ID=gene-CCO46_RS03070;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CCO46_RS03070;old_locus_tag=CCO46_03070 NZ_NPOH01000002.1 Protein Homology CDS 39548 40480 . + 0 ID=cds-WP_000428751.1;Parent=gene-CCO46_RS03070;Dbxref=GenBank:WP_000428751.1;Name=WP_000428751.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=CCO46_RS03070;product=carbamate kinase;protein_id=WP_000428751.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 40486 40568 . - . ID=gene-CCO46_RS25800;Name=CCO46_RS25800;end_range=40568,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25800;partial=true;pseudo=true;start_range=.,40486 NZ_NPOH01000002.1 Protein Homology CDS 40486 40568 . - 0 ID=cds-CCO46_RS25800;Parent=gene-CCO46_RS25800;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=40568,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO46_RS25800;partial=true;product=hypothetical protein;pseudo=true;start_range=.,40486;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 40592 41596 . + . ID=gene-CCO46_RS03075;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO46_RS03075;old_locus_tag=CCO46_03075 NZ_NPOH01000002.1 Protein Homology CDS 40592 41596 . + 0 ID=cds-WP_000237035.1;Parent=gene-CCO46_RS03075;Dbxref=GenBank:WP_000237035.1;Name=WP_000237035.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=CCO46_RS03075;product=ornithine carbamoyltransferase;protein_id=WP_000237035.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 41652 43055 . + . ID=gene-CCO46_RS03080;Name=CCO46_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03080;old_locus_tag=CCO46_03080 NZ_NPOH01000002.1 Protein Homology CDS 41652 43055 . + 0 ID=cds-WP_000514424.1;Parent=gene-CCO46_RS03080;Dbxref=GenBank:WP_000514424.1;Name=WP_000514424.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=CCO46_RS03080;product=YfcC family protein;protein_id=WP_000514424.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 43242 43730 . + . ID=gene-CCO46_RS03085;Name=CCO46_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03085;old_locus_tag=CCO46_03085 NZ_NPOH01000002.1 Protein Homology CDS 43242 43730 . + 0 ID=cds-WP_000666051.1;Parent=gene-CCO46_RS03085;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=CCO46_RS03085;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 43700 43841 . - . ID=gene-CCO46_RS03090;Name=CCO46_RS03090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS03090;old_locus_tag=CCO46_03090;pseudo=true NZ_NPOH01000002.1 Protein Homology CDS 43700 43841 . - 0 ID=cds-CCO46_RS03090;Parent=gene-CCO46_RS03090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=CCO46_RS03090;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 43821 43922 . + . ID=gene-CCO46_RS03095;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=CCO46_RS03095;old_locus_tag=CCO46_03095 NZ_NPOH01000002.1 Protein Homology CDS 43821 43922 . + 0 ID=cds-WP_000249504.1;Parent=gene-CCO46_RS03095;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=CCO46_RS03095;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 43958 44893 . + . ID=gene-CCO46_RS03100;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=CCO46_RS03100;old_locus_tag=CCO46_03100 NZ_NPOH01000002.1 Protein Homology CDS 43958 44893 . + 0 ID=cds-WP_000013055.1;Parent=gene-CCO46_RS03100;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=CCO46_RS03100;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 44906 45367 . + . ID=gene-CCO46_RS03105;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=CCO46_RS03105;old_locus_tag=CCO46_03105 NZ_NPOH01000002.1 Protein Homology CDS 44906 45367 . + 0 ID=cds-WP_000148567.1;Parent=gene-CCO46_RS03105;Dbxref=GenBank:WP_000148567.1;Name=WP_000148567.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=CCO46_RS03105;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148567.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 45444 45830 . + . ID=gene-CCO46_RS03110;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=CCO46_RS03110;old_locus_tag=CCO46_03110 NZ_NPOH01000002.1 Protein Homology CDS 45444 45830 . + 0 ID=cds-WP_000047544.1;Parent=gene-CCO46_RS03110;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=CCO46_RS03110;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 45905 46351 . + . ID=gene-CCO46_RS03115;Name=CCO46_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03115;old_locus_tag=CCO46_03115 NZ_NPOH01000002.1 Protein Homology CDS 45905 46351 . + 0 ID=cds-WP_058331428.1;Parent=gene-CCO46_RS03115;Dbxref=GenBank:WP_058331428.1;Name=WP_058331428.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=CCO46_RS03115;product=transposase;protein_id=WP_058331428.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 46467 49175 . - . ID=gene-CCO46_RS03120;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO46_RS03120;old_locus_tag=CCO46_03120 NZ_NPOH01000002.1 Protein Homology CDS 46467 49175 . - 0 ID=cds-WP_000920867.1;Parent=gene-CCO46_RS03120;Dbxref=GenBank:WP_000920867.1;Name=WP_000920867.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=CCO46_RS03120;product=magnesium-translocating P-type ATPase;protein_id=WP_000920867.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 49316 49414 . - . ID=gene-CCO46_RS25805;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=CCO46_RS25805 NZ_NPOH01000002.1 Protein Homology CDS 49316 49414 . - 0 ID=cds-WP_105789234.1;Parent=gene-CCO46_RS25805;Dbxref=GenBank:WP_105789234.1;Name=WP_105789234.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=CCO46_RS25805;product=mgtA regulatory leader peptide MgtL;protein_id=WP_105789234.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 49559 50506 . + . ID=gene-CCO46_RS03125;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CCO46_RS03125;old_locus_tag=CCO46_03125 NZ_NPOH01000002.1 Protein Homology CDS 49559 50506 . + 0 ID=cds-WP_001181297.1;Parent=gene-CCO46_RS03125;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=CCO46_RS03125;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 50644 52062 . + . ID=gene-CCO46_RS03130;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=CCO46_RS03130;old_locus_tag=CCO46_03130 NZ_NPOH01000002.1 Protein Homology CDS 50644 52062 . + 0 ID=cds-WP_000048828.1;Parent=gene-CCO46_RS03130;Dbxref=GenBank:WP_000048828.1;Name=WP_000048828.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=CCO46_RS03130;product=PTS trehalose transporter subunit IIBC;protein_id=WP_000048828.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 52112 53764 . + . ID=gene-CCO46_RS03135;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CCO46_RS03135;old_locus_tag=CCO46_03135 NZ_NPOH01000002.1 Protein Homology CDS 52112 53764 . + 0 ID=cds-WP_094887719.1;Parent=gene-CCO46_RS03135;Dbxref=GenBank:WP_094887719.1;Name=WP_094887719.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=CCO46_RS03135;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_094887719.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 54173 56311 . + . ID=gene-CCO46_RS03140;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CCO46_RS03140;old_locus_tag=CCO46_03140 NZ_NPOH01000002.1 Protein Homology CDS 54173 56311 . + 0 ID=cds-WP_000187818.1;Parent=gene-CCO46_RS03140;Dbxref=GenBank:WP_000187818.1;Name=WP_000187818.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=CCO46_RS03140;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187818.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 56432 56896 . + . ID=gene-CCO46_RS03145;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CCO46_RS03145;old_locus_tag=CCO46_03145 NZ_NPOH01000002.1 Protein Homology CDS 56432 56896 . + 0 ID=cds-WP_001268862.1;Parent=gene-CCO46_RS03145;Dbxref=GenBank:WP_001268862.1;Name=WP_001268862.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=CCO46_RS03145;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001268862.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 56900 57184 . - . ID=gene-CCO46_RS03150;Name=CCO46_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03150;old_locus_tag=CCO46_03150 NZ_NPOH01000002.1 Protein Homology CDS 56900 57184 . - 0 ID=cds-WP_000220577.1;Parent=gene-CCO46_RS03150;Dbxref=GenBank:WP_000220577.1;Name=WP_000220577.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=CCO46_RS03150;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220577.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 57174 57416 . - . ID=gene-CCO46_RS03155;Name=CCO46_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03155;old_locus_tag=CCO46_03155 NZ_NPOH01000002.1 Protein Homology CDS 57174 57416 . - 0 ID=cds-WP_000212724.1;Parent=gene-CCO46_RS03155;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=CCO46_RS03155;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 57494 59407 . - . ID=gene-CCO46_RS03160;Name=CCO46_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03160;old_locus_tag=CCO46_03160 NZ_NPOH01000002.1 Protein Homology CDS 57494 59407 . - 0 ID=cds-WP_140439310.1;Parent=gene-CCO46_RS03160;Dbxref=GenBank:WP_140439310.1;Name=WP_140439310.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=CCO46_RS03160;product=BglG family transcription antiterminator;protein_id=WP_140439310.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 59424 60164 . - . ID=gene-CCO46_RS03165;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO46_RS03165;old_locus_tag=CCO46_03165 NZ_NPOH01000002.1 Protein Homology CDS 59424 60164 . - 0 ID=cds-WP_000779262.1;Parent=gene-CCO46_RS03165;Dbxref=GenBank:WP_000779262.1;Name=WP_000779262.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=CCO46_RS03165;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000779262.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 60161 61279 . - . ID=gene-CCO46_RS03170;Name=CCO46_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03170;old_locus_tag=CCO46_03170 NZ_NPOH01000002.1 Protein Homology CDS 60161 61279 . - 0 ID=cds-WP_079944388.1;Parent=gene-CCO46_RS03170;Dbxref=GenBank:WP_079944388.1;Name=WP_079944388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=CCO46_RS03170;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_079944388.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 61263 62396 . - . ID=gene-CCO46_RS03175;Name=CCO46_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03175;old_locus_tag=CCO46_03175 NZ_NPOH01000002.1 Protein Homology CDS 61263 62396 . - 0 ID=cds-WP_000459951.1;Parent=gene-CCO46_RS03175;Dbxref=GenBank:WP_000459951.1;Name=WP_000459951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=CCO46_RS03175;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_000459951.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 62455 63099 . - . ID=gene-CCO46_RS03180;Name=CCO46_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03180;old_locus_tag=CCO46_03180 NZ_NPOH01000002.1 Protein Homology CDS 62455 63099 . - 0 ID=cds-WP_000392127.1;Parent=gene-CCO46_RS03180;Dbxref=GenBank:WP_000392127.1;Name=WP_000392127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=CCO46_RS03180;product=DUF4310 family protein;protein_id=WP_000392127.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 63111 63887 . - . ID=gene-CCO46_RS03185;Name=CCO46_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03185;old_locus_tag=CCO46_03185 NZ_NPOH01000002.1 Protein Homology CDS 63111 63887 . - 0 ID=cds-WP_000478578.1;Parent=gene-CCO46_RS03185;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=CCO46_RS03185;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 63910 64212 . - . ID=gene-CCO46_RS03190;Name=CCO46_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03190;old_locus_tag=CCO46_03190 NZ_NPOH01000002.1 Protein Homology CDS 63910 64212 . - 0 ID=cds-WP_000975187.1;Parent=gene-CCO46_RS03190;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=CCO46_RS03190;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 64212 64574 . - . ID=gene-CCO46_RS03195;Name=CCO46_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03195;old_locus_tag=CCO46_03195 NZ_NPOH01000002.1 Protein Homology CDS 64212 64574 . - 0 ID=cds-WP_000435389.1;Parent=gene-CCO46_RS03195;Dbxref=GenBank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=CCO46_RS03195;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 64585 64923 . - . ID=gene-CCO46_RS03200;Name=CCO46_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03200;old_locus_tag=CCO46_03200 NZ_NPOH01000002.1 Protein Homology CDS 64585 64923 . - 0 ID=cds-WP_001255101.1;Parent=gene-CCO46_RS03200;Dbxref=GenBank:WP_001255101.1;Name=WP_001255101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=CCO46_RS03200;product=glycine dehydrogenase;protein_id=WP_001255101.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 65201 65587 . - . ID=gene-CCO46_RS03205;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=CCO46_RS03205;old_locus_tag=CCO46_03205 NZ_NPOH01000002.1 Protein Homology CDS 65201 65587 . - 0 ID=cds-WP_001232230.1;Parent=gene-CCO46_RS03205;Dbxref=GenBank:WP_001232230.1;Name=WP_001232230.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=CCO46_RS03205;product=cytochrome b562;protein_id=WP_001232230.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 65686 67038 . - . ID=gene-CCO46_RS03210;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=CCO46_RS03210;old_locus_tag=CCO46_03210 NZ_NPOH01000002.1 Protein Homology CDS 65686 67038 . - 0 ID=cds-WP_094964418.1;Parent=gene-CCO46_RS03210;Dbxref=GenBank:WP_094964418.1;Name=WP_094964418.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=CCO46_RS03210;product=metalloprotease PmbA;protein_id=WP_094964418.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 67134 67685 . + . ID=gene-CCO46_RS03215;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=CCO46_RS03215;old_locus_tag=CCO46_03215 NZ_NPOH01000002.1 Protein Homology CDS 67134 67685 . + 0 ID=cds-WP_000166287.1;Parent=gene-CCO46_RS03215;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=CCO46_RS03215;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 67792 69165 . - . ID=gene-CCO46_RS03220;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=CCO46_RS03220;old_locus_tag=CCO46_03220 NZ_NPOH01000002.1 Protein Homology CDS 67792 69165 . - 0 ID=cds-WP_097363227.1;Parent=gene-CCO46_RS03220;Dbxref=GenBank:WP_097363227.1;Name=WP_097363227.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=CCO46_RS03220;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_097363227.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 69340 70338 . + . ID=gene-CCO46_RS03225;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=CCO46_RS03225;old_locus_tag=CCO46_03225 NZ_NPOH01000002.1 Protein Homology CDS 69340 70338 . + 0 ID=cds-WP_000853764.1;Parent=gene-CCO46_RS03225;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=CCO46_RS03225;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 70565 71095 . + . ID=gene-CCO46_RS03230;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=CCO46_RS03230;old_locus_tag=CCO46_03230 NZ_NPOH01000002.1 Protein Homology CDS 70565 71095 . + 0 ID=cds-WP_000055079.1;Parent=gene-CCO46_RS03230;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=CCO46_RS03230;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 71505 72668 . + . ID=gene-CCO46_RS03235;Name=CCO46_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03235;old_locus_tag=CCO46_03235 NZ_NPOH01000002.1 Protein Homology CDS 71505 72668 . + 0 ID=cds-WP_000977207.1;Parent=gene-CCO46_RS03235;Dbxref=GenBank:WP_000977207.1;Name=WP_000977207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=CCO46_RS03235;product=metallo-dependent hydrolase;protein_id=WP_000977207.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 72665 73873 . + . ID=gene-CCO46_RS03240;Name=CCO46_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03240;old_locus_tag=CCO46_03240 NZ_NPOH01000002.1 Protein Homology CDS 72665 73873 . + 0 ID=cds-WP_000203131.1;Parent=gene-CCO46_RS03240;Dbxref=GenBank:WP_000203131.1;Name=WP_000203131.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=CCO46_RS03240;product=MFS transporter;protein_id=WP_000203131.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 73927 74271 . - . ID=gene-CCO46_RS03245;Name=CCO46_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03245;old_locus_tag=CCO46_03245 NZ_NPOH01000002.1 Protein Homology CDS 73927 74271 . - 0 ID=cds-WP_001219167.1;Parent=gene-CCO46_RS03245;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=CCO46_RS03245;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 74274 78053 . - . ID=gene-CCO46_RS03250;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=CCO46_RS03250;old_locus_tag=CCO46_03250 NZ_NPOH01000002.1 Protein Homology CDS 74274 78053 . - 0 ID=cds-WP_097363228.1;Parent=gene-CCO46_RS03250;Dbxref=GenBank:WP_097363228.1;Name=WP_097363228.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=CCO46_RS03250;product=autotransporter assembly complex protein TamB;protein_id=WP_097363228.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 78050 79783 . - . ID=gene-CCO46_RS03255;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=CCO46_RS03255;old_locus_tag=CCO46_03255 NZ_NPOH01000002.1 Protein Homology CDS 78050 79783 . - 0 ID=cds-WP_097363229.1;Parent=gene-CCO46_RS03255;Dbxref=GenBank:WP_097363229.1;Name=WP_097363229.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=CCO46_RS03255;product=autotransporter assembly complex protein TamA;protein_id=WP_097363229.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 79996 80634 . + . ID=gene-CCO46_RS03260;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CCO46_RS03260;old_locus_tag=CCO46_03260 NZ_NPOH01000002.1 Protein Homology CDS 79996 80634 . + 0 ID=cds-WP_097363230.1;Parent=gene-CCO46_RS03260;Dbxref=GenBank:WP_097363230.1;Name=WP_097363230.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=CCO46_RS03260;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_097363230.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 80817 82160 . + . ID=gene-CCO46_RS03265;Name=CCO46_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03265;old_locus_tag=CCO46_03265 NZ_NPOH01000002.1 Protein Homology CDS 80817 82160 . + 0 ID=cds-WP_000934974.1;Parent=gene-CCO46_RS03265;Dbxref=GenBank:WP_000934974.1;Name=WP_000934974.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=CCO46_RS03265;product=hemolysin family protein;protein_id=WP_000934974.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 82245 82451 . - . ID=gene-CCO46_RS03270;Name=CCO46_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03270;old_locus_tag=CCO46_03270 NZ_NPOH01000002.1 Protein Homology CDS 82245 82451 . - 0 ID=cds-WP_000689229.1;Parent=gene-CCO46_RS03270;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=CCO46_RS03270;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 82778 83335 . + . ID=gene-CCO46_RS03280;Name=CCO46_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03280;old_locus_tag=CCO46_03280 NZ_NPOH01000002.1 Protein Homology CDS 82778 83335 . + 0 ID=cds-WP_000175300.1;Parent=gene-CCO46_RS03280;Dbxref=GenBank:WP_000175300.1;Name=WP_000175300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=CCO46_RS03280;product=YtfJ family protein;protein_id=WP_000175300.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 83325 84065 . - . ID=gene-CCO46_RS03285;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=CCO46_RS03285;old_locus_tag=CCO46_03285 NZ_NPOH01000002.1 Protein Homology CDS 83325 84065 . - 0 ID=cds-WP_000893398.1;Parent=gene-CCO46_RS03285;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=CCO46_RS03285;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 84333 86276 . + . ID=gene-CCO46_RS03295;Name=CCO46_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03295;old_locus_tag=CCO46_03295 NZ_NPOH01000002.1 Protein Homology CDS 84333 86276 . + 0 ID=cds-WP_094887723.1;Parent=gene-CCO46_RS03295;Dbxref=GenBank:WP_094887723.1;Name=WP_094887723.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=CCO46_RS03295;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_094887723.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 86334 86720 . - . ID=gene-CCO46_RS03300;Name=CCO46_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03300;old_locus_tag=CCO46_03300 NZ_NPOH01000002.1 Protein Homology CDS 86334 86720 . - 0 ID=cds-WP_001201297.1;Parent=gene-CCO46_RS03300;Dbxref=GenBank:WP_001201297.1;Name=WP_001201297.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=CCO46_RS03300;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201297.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 86808 87656 . + . ID=gene-CCO46_RS03305;Name=CCO46_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03305;old_locus_tag=CCO46_03305 NZ_NPOH01000002.1 Protein Homology CDS 86808 87656 . + 0 ID=cds-WP_094887724.1;Parent=gene-CCO46_RS03305;Dbxref=GenBank:WP_094887724.1;Name=WP_094887724.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=CCO46_RS03305;product=SDR family oxidoreductase;protein_id=WP_094887724.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 87737 88702 . + . ID=gene-CCO46_RS03310;Name=CCO46_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03310;old_locus_tag=CCO46_03310 NZ_NPOH01000002.1 Protein Homology CDS 87737 88702 . + 0 ID=cds-WP_000623290.1;Parent=gene-CCO46_RS03310;Dbxref=GenBank:WP_000623290.1;Name=WP_000623290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=CCO46_RS03310;product=DMT family transporter;protein_id=WP_000623290.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 88805 89467 . + . ID=gene-CCO46_RS03315;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=CCO46_RS03315;old_locus_tag=CCO46_03315 NZ_NPOH01000002.1 Protein Homology CDS 88805 89467 . + 0 ID=cds-WP_000331471.1;Parent=gene-CCO46_RS03315;Dbxref=GenBank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=CCO46_RS03315;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 89579 90988 . - . ID=gene-CCO46_RS03320;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=CCO46_RS03320;old_locus_tag=CCO46_03320 NZ_NPOH01000002.1 Protein Homology CDS 89579 90988 . - 0 ID=cds-WP_000228322.1;Parent=gene-CCO46_RS03320;Dbxref=GenBank:WP_000228322.1;Name=WP_000228322.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=CCO46_RS03320;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228322.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 91284 91904 . - . ID=gene-CCO46_RS03325;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=CCO46_RS03325;old_locus_tag=CCO46_03325 NZ_NPOH01000002.1 Protein Homology CDS 91284 91904 . - 0 ID=cds-WP_000235161.1;Parent=gene-CCO46_RS03325;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=CCO46_RS03325;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 92124 92759 . + . ID=gene-CCO46_RS03330;Name=CCO46_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03330;old_locus_tag=CCO46_03330 NZ_NPOH01000002.1 Protein Homology CDS 92124 92759 . + 0 ID=cds-WP_001119446.1;Parent=gene-CCO46_RS03330;Dbxref=GenBank:WP_001119446.1;Name=WP_001119446.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=CCO46_RS03330;product=OapA family protein;protein_id=WP_001119446.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 92809 93735 . - . ID=gene-CCO46_RS03335;Name=CCO46_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03335;old_locus_tag=CCO46_03335 NZ_NPOH01000002.1 Protein Homology CDS 92809 93735 . - 0 ID=cds-WP_080207808.1;Parent=gene-CCO46_RS03335;Dbxref=GenBank:WP_080207808.1;Name=WP_080207808.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=CCO46_RS03335;product=DMT family transporter;protein_id=WP_080207808.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 93883 94332 . - . ID=gene-CCO46_RS03340;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CCO46_RS03340;old_locus_tag=CCO46_03340 NZ_NPOH01000002.1 Protein Homology CDS 93883 94332 . - 0 ID=cds-WP_001196065.1;Parent=gene-CCO46_RS03340;Dbxref=GenBank:WP_001196065.1;Name=WP_001196065.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=CCO46_RS03340;product=50S ribosomal protein L9;protein_id=WP_001196065.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 94374 94601 . - . ID=gene-CCO46_RS03345;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CCO46_RS03345;old_locus_tag=CCO46_03345 NZ_NPOH01000002.1 Protein Homology CDS 94374 94601 . - 0 ID=cds-WP_000135199.1;Parent=gene-CCO46_RS03345;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=CCO46_RS03345;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 94606 94920 . - . ID=gene-CCO46_RS03350;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=CCO46_RS03350;old_locus_tag=CCO46_03350 NZ_NPOH01000002.1 Protein Homology CDS 94606 94920 . - 0 ID=cds-WP_023138842.1;Parent=gene-CCO46_RS03350;Dbxref=GenBank:WP_023138842.1;Name=WP_023138842.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=CCO46_RS03350;product=primosomal replication protein N;protein_id=WP_023138842.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 94927 95322 . - . ID=gene-CCO46_RS03355;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CCO46_RS03355;old_locus_tag=CCO46_03355 NZ_NPOH01000002.1 Protein Homology CDS 94927 95322 . - 0 ID=cds-WP_001216673.1;Parent=gene-CCO46_RS03355;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=CCO46_RS03355;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 95709 95984 . + . ID=gene-CCO46_RS03365;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=CCO46_RS03365;old_locus_tag=CCO46_03365 NZ_NPOH01000002.1 Protein Homology CDS 95709 95984 . + 0 ID=cds-WP_000466074.1;Parent=gene-CCO46_RS03365;Dbxref=GenBank:WP_000466074.1;Name=WP_000466074.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=CCO46_RS03365;product=DUF1471 family protein YjfY;protein_id=WP_000466074.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 96038 96595 . - . ID=gene-CCO46_RS03370;Name=CCO46_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03370;old_locus_tag=CCO46_03370 NZ_NPOH01000002.1 Protein Homology CDS 96038 96595 . - 0 ID=cds-WP_000026294.1;Parent=gene-CCO46_RS03370;Dbxref=GenBank:WP_000026294.1;Name=WP_000026294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=CCO46_RS03370;product=YagU family protein;protein_id=WP_000026294.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 96683 97369 . - . ID=gene-CCO46_RS03375;Name=CCO46_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03375;old_locus_tag=CCO46_03375 NZ_NPOH01000002.1 Protein Homology CDS 96683 97369 . - 0 ID=cds-WP_023181364.1;Parent=gene-CCO46_RS03375;Dbxref=GenBank:WP_023181364.1;Name=WP_023181364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=CCO46_RS03375;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_023181364.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 97369 98223 . - . ID=gene-CCO46_RS03380;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=CCO46_RS03380;old_locus_tag=CCO46_03380 NZ_NPOH01000002.1 Protein Homology CDS 97369 98223 . - 0 ID=cds-WP_000949530.1;Parent=gene-CCO46_RS03380;Dbxref=GenBank:WP_000949530.1;Name=WP_000949530.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=CCO46_RS03380;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949530.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 98233 98883 . - . ID=gene-CCO46_RS03385;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO46_RS03385;old_locus_tag=CCO46_03385 NZ_NPOH01000002.1 Protein Homology CDS 98233 98883 . - 0 ID=cds-WP_000056761.1;Parent=gene-CCO46_RS03385;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=CCO46_RS03385;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 98897 99361 . - . ID=gene-CCO46_RS03390;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=CCO46_RS03390;old_locus_tag=CCO46_03390 NZ_NPOH01000002.1 Protein Homology CDS 98897 99361 . - 0 ID=cds-WP_000776531.1;Parent=gene-CCO46_RS03390;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=CCO46_RS03390;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 99371 99676 . - . ID=gene-CCO46_RS03395;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=CCO46_RS03395;old_locus_tag=CCO46_03395 NZ_NPOH01000002.1 Protein Homology CDS 99371 99676 . - 0 ID=cds-WP_000218358.1;Parent=gene-CCO46_RS03395;Dbxref=GenBank:WP_000218358.1;Name=WP_000218358.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=CCO46_RS03395;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218358.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 99692 101089 . - . ID=gene-CCO46_RS03400;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=CCO46_RS03400;old_locus_tag=CCO46_03400 NZ_NPOH01000002.1 Protein Homology CDS 99692 101089 . - 0 ID=cds-WP_000404876.1;Parent=gene-CCO46_RS03400;Dbxref=GenBank:WP_000404876.1;Name=WP_000404876.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=CCO46_RS03400;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404876.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 101452 102516 . + . ID=gene-CCO46_RS03405;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CCO46_RS03405;old_locus_tag=CCO46_03405 NZ_NPOH01000002.1 Protein Homology CDS 101452 102516 . + 0 ID=cds-WP_000049161.1;Parent=gene-CCO46_RS03405;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=CCO46_RS03405;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 102621 103376 . + . ID=gene-CCO46_RS03410;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=CCO46_RS03410;old_locus_tag=CCO46_03410 NZ_NPOH01000002.1 Protein Homology CDS 102621 103376 . + 0 ID=cds-WP_000133620.1;Parent=gene-CCO46_RS03410;Dbxref=GenBank:WP_000133620.1;Name=WP_000133620.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=CCO46_RS03410;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133620.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 103373 104122 . - . ID=gene-CCO46_RS03415;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=CCO46_RS03415;old_locus_tag=CCO46_03415 NZ_NPOH01000002.1 Protein Homology CDS 103373 104122 . - 0 ID=cds-WP_076727921.1;Parent=gene-CCO46_RS03415;Dbxref=GenBank:WP_076727921.1;Name=WP_076727921.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=CCO46_RS03415;product=esterase;protein_id=WP_076727921.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 104306 104635 . + . ID=gene-CCO46_RS03420;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=CCO46_RS03420;old_locus_tag=CCO46_03420 NZ_NPOH01000002.1 Protein Homology CDS 104306 104635 . + 0 ID=cds-WP_000586836.1;Parent=gene-CCO46_RS03420;Dbxref=GenBank:WP_000586836.1;Name=WP_000586836.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=CCO46_RS03420;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586836.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 104766 105041 . + . ID=gene-CCO46_RS03425;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=CCO46_RS03425;old_locus_tag=CCO46_03425 NZ_NPOH01000002.1 Protein Homology CDS 104766 105041 . + 0 ID=cds-WP_001542902.1;Parent=gene-CCO46_RS03425;Dbxref=GenBank:WP_001542902.1;Name=WP_001542902.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=CCO46_RS03425;product=DUF1471 family protease activator YjfN;protein_id=WP_001542902.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 105086 106708 . - . ID=gene-CCO46_RS03430;Name=CCO46_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03430;old_locus_tag=CCO46_03430 NZ_NPOH01000002.1 Protein Homology CDS 105086 106708 . - 0 ID=cds-WP_079981355.1;Parent=gene-CCO46_RS03430;Dbxref=GenBank:WP_079981355.1;Name=WP_079981355.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=CCO46_RS03430;product=isovaleryl-CoA dehydrogenase;protein_id=WP_079981355.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 106793 107956 . - . ID=gene-CCO46_RS03435;Name=CCO46_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03435;old_locus_tag=CCO46_03435 NZ_NPOH01000002.1 Protein Homology CDS 106793 107956 . - 0 ID=cds-WP_061372370.1;Parent=gene-CCO46_RS03435;Dbxref=GenBank:WP_061372370.1;Name=WP_061372370.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=CCO46_RS03435;product=glutathionylspermidine synthase family protein;protein_id=WP_061372370.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 107959 108597 . - . ID=gene-CCO46_RS03440;Name=CCO46_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03440;old_locus_tag=CCO46_03440 NZ_NPOH01000002.1 Protein Homology CDS 107959 108597 . - 0 ID=cds-WP_001085605.1;Parent=gene-CCO46_RS03440;Dbxref=GenBank:WP_001085605.1;Name=WP_001085605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=CCO46_RS03440;product=DUF1190 domain-containing protein;protein_id=WP_001085605.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 108607 109005 . - . ID=gene-CCO46_RS03445;Name=CCO46_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03445;old_locus_tag=CCO46_03445 NZ_NPOH01000002.1 Protein Homology CDS 108607 109005 . - 0 ID=cds-WP_000547738.1;Parent=gene-CCO46_RS03445;Dbxref=GenBank:WP_000547738.1;Name=WP_000547738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=CCO46_RS03445;product=DUF350 domain-containing protein;protein_id=WP_000547738.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 109023 109706 . - . ID=gene-CCO46_RS03450;Name=CCO46_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03450;old_locus_tag=CCO46_03450 NZ_NPOH01000002.1 Protein Homology CDS 109023 109706 . - 0 ID=cds-WP_080207807.1;Parent=gene-CCO46_RS03450;Dbxref=GenBank:WP_080207807.1;Name=WP_080207807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=CCO46_RS03450;product=YjfK family protein;protein_id=WP_080207807.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 109829 109930 . - . ID=gene-CCO46_RS25395;Name=CCO46_RS25395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25395;partial=true;pseudo=true;start_range=.,109829 NZ_NPOH01000002.1 Protein Homology CDS 109829 109930 . - 0 ID=cds-CCO46_RS25395;Parent=gene-CCO46_RS25395;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=CCO46_RS25395;partial=true;product=hypothetical protein;pseudo=true;start_range=.,109829;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 109930 110628 . - . ID=gene-CCO46_RS03455;Name=CCO46_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03455;old_locus_tag=CCO46_03455 NZ_NPOH01000002.1 Protein Homology CDS 109930 110628 . - 0 ID=cds-WP_000511981.1;Parent=gene-CCO46_RS03455;Dbxref=GenBank:WP_000511981.1;Name=WP_000511981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=CCO46_RS03455;product=PspA/IM30 family protein;protein_id=WP_000511981.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 110643 111047 . - . ID=gene-CCO46_RS03460;Name=CCO46_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03460;old_locus_tag=CCO46_03460 NZ_NPOH01000002.1 Protein Homology CDS 110643 111047 . - 0 ID=cds-WP_000312605.1;Parent=gene-CCO46_RS03460;Dbxref=GenBank:WP_000312605.1;Name=WP_000312605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=CCO46_RS03460;product=YjfI family protein;protein_id=WP_000312605.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 111179 111910 . - . ID=gene-CCO46_RS03465;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CCO46_RS03465;old_locus_tag=CCO46_03465 NZ_NPOH01000002.1 Protein Homology CDS 111179 111910 . - 0 ID=cds-WP_001293274.1;Parent=gene-CCO46_RS03465;Dbxref=GenBank:WP_001293274.1;Name=WP_001293274.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=CCO46_RS03465;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293274.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 112001 114439 . - . ID=gene-CCO46_RS03470;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CCO46_RS03470;old_locus_tag=CCO46_03470 NZ_NPOH01000002.1 Protein Homology CDS 112001 114439 . - 0 ID=cds-WP_000076354.1;Parent=gene-CCO46_RS03470;Dbxref=GenBank:WP_000076354.1;Name=WP_000076354.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=CCO46_RS03470;product=ribonuclease R;protein_id=WP_000076354.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 114477 114902 . - . ID=gene-CCO46_RS03475;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=CCO46_RS03475;old_locus_tag=CCO46_03475 NZ_NPOH01000002.1 Protein Homology CDS 114477 114902 . - 0 ID=cds-WP_001177632.1;Parent=gene-CCO46_RS03475;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=CCO46_RS03475;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 115109 116407 . - . ID=gene-CCO46_RS03480;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=CCO46_RS03480;old_locus_tag=CCO46_03480 NZ_NPOH01000002.1 Protein Homology CDS 115109 116407 . - 0 ID=cds-WP_000527972.1;Parent=gene-CCO46_RS03480;Dbxref=GenBank:WP_000527972.1;Name=WP_000527972.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=CCO46_RS03480;product=adenylosuccinate synthase;protein_id=WP_000527972.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 116510 116707 . - . ID=gene-CCO46_RS03485;Name=CCO46_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03485;old_locus_tag=CCO46_03485 NZ_NPOH01000002.1 Protein Homology CDS 116510 116707 . - 0 ID=cds-WP_001089290.1;Parent=gene-CCO46_RS03485;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=CCO46_RS03485;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 116786 117790 . - . ID=gene-CCO46_RS03490;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=CCO46_RS03490;old_locus_tag=CCO46_03490 NZ_NPOH01000002.1 Protein Homology CDS 116786 117790 . - 0 ID=cds-WP_001232417.1;Parent=gene-CCO46_RS03490;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=CCO46_RS03490;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 117793 119052 . - . ID=gene-CCO46_RS03495;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=CCO46_RS03495;old_locus_tag=CCO46_03495 NZ_NPOH01000002.1 Protein Homology CDS 117793 119052 . - 0 ID=cds-WP_000312505.1;Parent=gene-CCO46_RS03495;Dbxref=GenBank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=CCO46_RS03495;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 119267 120547 . - . ID=gene-CCO46_RS03500;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CCO46_RS03500;old_locus_tag=CCO46_03500 NZ_NPOH01000002.1 Protein Homology CDS 119267 120547 . - 0 ID=cds-WP_000460338.1;Parent=gene-CCO46_RS03500;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=CCO46_RS03500;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 120619 120927 . - . ID=gene-CCO46_RS03505;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CCO46_RS03505;old_locus_tag=CCO46_03505 NZ_NPOH01000002.1 Protein Homology CDS 120619 120927 . - 0 ID=cds-WP_001051875.1;Parent=gene-CCO46_RS03505;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=CCO46_RS03505;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 121010 121960 . - . ID=gene-CCO46_RS03510;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CCO46_RS03510;old_locus_tag=CCO46_03510 NZ_NPOH01000002.1 Protein Homology CDS 121010 121960 . - 0 ID=cds-WP_001000734.1;Parent=gene-CCO46_RS03510;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=CCO46_RS03510;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 121953 123809 . - . ID=gene-CCO46_RS03515;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CCO46_RS03515;old_locus_tag=CCO46_03515 NZ_NPOH01000002.1 Protein Homology CDS 121953 123809 . - 0 ID=cds-WP_001621775.1;Parent=gene-CCO46_RS03515;Dbxref=GenBank:WP_001621775.1;Name=WP_001621775.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=CCO46_RS03515;product=DNA mismatch repair endonuclease MutL;protein_id=WP_001621775.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 123819 125138 . - . ID=gene-CCO46_RS03520;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=CCO46_RS03520;old_locus_tag=CCO46_03520 NZ_NPOH01000002.1 Protein Homology CDS 123819 125138 . - 0 ID=cds-WP_097363231.1;Parent=gene-CCO46_RS03520;Dbxref=GenBank:WP_097363231.1;Name=WP_097363231.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=CCO46_RS03520;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_097363231.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 125155 125616 . - . ID=gene-CCO46_RS03525;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CCO46_RS03525;old_locus_tag=CCO46_03525 NZ_NPOH01000002.1 Protein Homology CDS 125155 125616 . - 0 ID=cds-WP_000981984.1;Parent=gene-CCO46_RS03525;Dbxref=GenBank:WP_000981984.1;Name=WP_000981984.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=CCO46_RS03525;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 125588 127135 . - . ID=gene-CCO46_RS03530;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=CCO46_RS03530;old_locus_tag=CCO46_03530 NZ_NPOH01000002.1 Protein Homology CDS 125588 127135 . - 0 ID=cds-WP_023249935.1;Parent=gene-CCO46_RS03530;Dbxref=GenBank:WP_023249935.1;Name=WP_023249935.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=CCO46_RS03530;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_023249935.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 127134 128273 . + . ID=gene-CCO46_RS03535;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CCO46_RS03535;old_locus_tag=CCO46_03535 NZ_NPOH01000002.1 Protein Homology CDS 127134 128273 . + 0 ID=cds-WP_001615111.1;Parent=gene-CCO46_RS03535;Dbxref=GenBank:WP_001615111.1;Name=WP_001615111.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=CCO46_RS03535;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001615111.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 128543 128618 . - . ID=gene-CCO46_RS03540;Name=CCO46_RS03540;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS03540;old_locus_tag=CCO46_03540 NZ_NPOH01000002.1 tRNAscan-SE tRNA 128543 128618 . - . ID=rna-CCO46_RS03540;Parent=gene-CCO46_RS03540;anticodon=(pos:complement(128583..128585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS03540;product=tRNA-Gly NZ_NPOH01000002.1 tRNAscan-SE exon 128543 128618 . - . ID=exon-CCO46_RS03540-1;Parent=rna-CCO46_RS03540;anticodon=(pos:complement(128583..128585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS03540;product=tRNA-Gly NZ_NPOH01000002.1 RefSeq gene 128775 128850 . - . ID=gene-CCO46_RS03545;Name=CCO46_RS03545;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS03545;old_locus_tag=CCO46_03545 NZ_NPOH01000002.1 tRNAscan-SE tRNA 128775 128850 . - . ID=rna-CCO46_RS03545;Parent=gene-CCO46_RS03545;anticodon=(pos:complement(128815..128817));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS03545;product=tRNA-Gly NZ_NPOH01000002.1 tRNAscan-SE exon 128775 128850 . - . ID=exon-CCO46_RS03545-1;Parent=rna-CCO46_RS03545;anticodon=(pos:complement(128815..128817));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS03545;product=tRNA-Gly NZ_NPOH01000002.1 RefSeq gene 129126 129866 . + . ID=gene-CCO46_RS03550;Name=CCO46_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03550;old_locus_tag=CCO46_03550 NZ_NPOH01000002.1 Protein Homology CDS 129126 129866 . + 0 ID=cds-WP_000727897.1;Parent=gene-CCO46_RS03550;Dbxref=GenBank:WP_000727897.1;Name=WP_000727897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=CCO46_RS03550;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727897.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 129928 130473 . - . ID=gene-CCO46_RS03555;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=CCO46_RS03555;old_locus_tag=CCO46_03555 NZ_NPOH01000002.1 Protein Homology CDS 129928 130473 . - 0 ID=cds-WP_058331438.1;Parent=gene-CCO46_RS03555;Dbxref=GenBank:WP_058331438.1;Name=WP_058331438.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=CCO46_RS03555;product=oligoribonuclease;protein_id=WP_058331438.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 130580 131632 . + . ID=gene-CCO46_RS03560;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CCO46_RS03560;old_locus_tag=CCO46_03560 NZ_NPOH01000002.1 Protein Homology CDS 130580 131632 . + 0 ID=cds-WP_023217926.1;Parent=gene-CCO46_RS03560;Dbxref=GenBank:WP_023217926.1;Name=WP_023217926.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=CCO46_RS03560;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_023217926.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 131724 132692 . + . ID=gene-CCO46_RS03565;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO46_RS03565;old_locus_tag=CCO46_03565 NZ_NPOH01000002.1 Protein Homology CDS 131724 132692 . + 0 ID=cds-WP_094964422.1;Parent=gene-CCO46_RS03565;Dbxref=GenBank:WP_094964422.1;Name=WP_094964422.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=CCO46_RS03565;product=archaetidylserine decarboxylase;protein_id=WP_094964422.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 132711 136037 . + . ID=gene-CCO46_RS03570;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=CCO46_RS03570;old_locus_tag=CCO46_03570 NZ_NPOH01000002.1 Protein Homology CDS 132711 136037 . + 0 ID=cds-WP_001236755.1;Parent=gene-CCO46_RS03570;Dbxref=GenBank:WP_001236755.1;Name=WP_001236755.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=CCO46_RS03570;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236755.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 136174 136494 . - . ID=gene-CCO46_RS03575;Name=CCO46_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03575;old_locus_tag=CCO46_03575 NZ_NPOH01000002.1 Protein Homology CDS 136174 136494 . - 0 ID=cds-WP_170947410.1;Parent=gene-CCO46_RS03575;Dbxref=GenBank:WP_170947410.1;Name=WP_170947410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=CCO46_RS03575;product=hypothetical protein;protein_id=WP_170947410.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 136559 138061 . - . ID=gene-CCO46_RS03580;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=CCO46_RS03580;old_locus_tag=CCO46_03580 NZ_NPOH01000002.1 Protein Homology CDS 136559 138061 . - 0 ID=cds-WP_000149872.1;Parent=gene-CCO46_RS03580;Dbxref=GenBank:WP_000149872.1;Name=WP_000149872.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=CCO46_RS03580;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000149872.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 138287 139264 . - . ID=gene-CCO46_RS03585;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=CCO46_RS03585;old_locus_tag=CCO46_03585 NZ_NPOH01000002.1 Protein Homology CDS 138287 139264 . - 0 ID=cds-WP_023242530.1;Parent=gene-CCO46_RS03585;Dbxref=GenBank:WP_023242530.1;Name=WP_023242530.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=CCO46_RS03585;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_023242530.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 139587 141377 . + . ID=gene-CCO46_RS03590;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=CCO46_RS03590;old_locus_tag=CCO46_03590 NZ_NPOH01000002.1 Protein Homology CDS 139587 141377 . + 0 ID=cds-WP_001192954.1;Parent=gene-CCO46_RS03590;Dbxref=GenBank:WP_001192954.1;Name=WP_001192954.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=CCO46_RS03590;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 141370 142104 . + . ID=gene-CCO46_RS03595;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=CCO46_RS03595;old_locus_tag=CCO46_03595 NZ_NPOH01000002.1 Protein Homology CDS 141370 142104 . + 0 ID=cds-WP_000829509.1;Parent=gene-CCO46_RS03595;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=CCO46_RS03595;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 142115 142510 . + . ID=gene-CCO46_RS03600;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=CCO46_RS03600;old_locus_tag=CCO46_03600 NZ_NPOH01000002.1 Protein Homology CDS 142115 142510 . + 0 ID=cds-WP_000208749.1;Parent=gene-CCO46_RS03600;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=CCO46_RS03600;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 142521 142880 . + . ID=gene-CCO46_RS03605;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=CCO46_RS03605;old_locus_tag=CCO46_03605 NZ_NPOH01000002.1 Protein Homology CDS 142521 142880 . + 0 ID=cds-WP_000609648.1;Parent=gene-CCO46_RS03605;Dbxref=GenBank:WP_000609648.1;Name=WP_000609648.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=CCO46_RS03605;product=fumarate reductase subunit FrdD;protein_id=WP_000609648.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 142991 143524 . + . ID=gene-CCO46_RS03610;Name=CCO46_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03610;old_locus_tag=CCO46_03610 NZ_NPOH01000002.1 Protein Homology CDS 142991 143524 . + 0 ID=cds-WP_001221670.1;Parent=gene-CCO46_RS03610;Dbxref=GenBank:WP_001221670.1;Name=WP_001221670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=CCO46_RS03610;product=lipocalin family protein;protein_id=WP_001221670.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 143541 143858 . - . ID=gene-CCO46_RS03615;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=CCO46_RS03615;old_locus_tag=CCO46_03615 NZ_NPOH01000002.1 Protein Homology CDS 143541 143858 . - 0 ID=cds-WP_000118469.1;Parent=gene-CCO46_RS03615;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=CCO46_RS03615;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 144115 144702 . + . ID=gene-CCO46_RS03620;Name=CCO46_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03620;old_locus_tag=CCO46_03620 NZ_NPOH01000002.1 Protein Homology CDS 144115 144702 . + 0 ID=cds-WP_001763937.1;Parent=gene-CCO46_RS03620;Dbxref=GenBank:WP_001763937.1;Name=WP_001763937.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=CCO46_RS03620;product=response regulator transcription factor;protein_id=WP_001763937.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 144733 144879 . - . ID=gene-CCO46_RS03625;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=CCO46_RS03625;old_locus_tag=CCO46_03625 NZ_NPOH01000002.1 Protein Homology CDS 144733 144879 . - 0 ID=cds-WP_000239598.1;Parent=gene-CCO46_RS03625;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=CCO46_RS03625;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 144987 145121 . - . ID=gene-CCO46_RS03630;Name=CCO46_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03630;old_locus_tag=CCO46_03630 NZ_NPOH01000002.1 Protein Homology CDS 144987 145121 . - 0 ID=cds-WP_000977687.1;Parent=gene-CCO46_RS03630;Dbxref=GenBank:WP_000977687.1;Name=WP_000977687.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=CCO46_RS03630;product=entericidin A/B family lipoprotein;protein_id=WP_000977687.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 145182 145748 . - . ID=gene-CCO46_RS03635;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CCO46_RS03635;old_locus_tag=CCO46_03635 NZ_NPOH01000002.1 Protein Homology CDS 145182 145748 . - 0 ID=cds-WP_000257282.1;Parent=gene-CCO46_RS03635;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=CCO46_RS03635;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 145789 146817 . + . ID=gene-CCO46_RS03640;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=CCO46_RS03640;old_locus_tag=CCO46_03640 NZ_NPOH01000002.1 Protein Homology CDS 145789 146817 . + 0 ID=cds-WP_000940482.1;Parent=gene-CCO46_RS03640;Dbxref=GenBank:WP_000940482.1;Name=WP_000940482.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=CCO46_RS03640;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940482.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 147099 147956 . + . ID=gene-CCO46_RS03645;Name=CCO46_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03645;old_locus_tag=CCO46_03645 NZ_NPOH01000002.1 Protein Homology CDS 147099 147956 . + 0 ID=cds-WP_001229232.1;Parent=gene-CCO46_RS03645;Dbxref=GenBank:WP_001229232.1;Name=WP_001229232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=CCO46_RS03645;product=YjeJ family protein;protein_id=WP_001229232.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 148004 148357 . - . ID=gene-CCO46_RS03650;Name=CCO46_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03650;old_locus_tag=CCO46_03650 NZ_NPOH01000002.1 Protein Homology CDS 148004 148357 . - 0 ID=cds-WP_000558210.1;Parent=gene-CCO46_RS03650;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=CCO46_RS03650;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 148601 150247 . - . ID=gene-CCO46_RS03655;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CCO46_RS03655;old_locus_tag=CCO46_03655 NZ_NPOH01000002.1 Protein Homology CDS 148601 150247 . - 0 ID=cds-WP_000729126.1;Parent=gene-CCO46_RS03655;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=CCO46_RS03655;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 150291 150584 . - . ID=gene-CCO46_RS03660;Name=CCO46_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03660;old_locus_tag=CCO46_03660 NZ_NPOH01000002.1 Protein Homology CDS 150291 150584 . - 0 ID=cds-WP_000027827.1;Parent=gene-CCO46_RS03660;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=CCO46_RS03660;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 150860 152101 . + . ID=gene-CCO46_RS03665;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=CCO46_RS03665;old_locus_tag=CCO46_03665 NZ_NPOH01000002.1 Protein Homology CDS 150860 152101 . + 0 ID=cds-WP_058331446.1;Parent=gene-CCO46_RS03665;Dbxref=GenBank:WP_058331446.1;Name=WP_058331446.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=CCO46_RS03665;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_058331446.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 152160 152636 . - . ID=gene-CCO46_RS03670;Name=CCO46_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03670;old_locus_tag=CCO46_03670 NZ_NPOH01000002.1 Protein Homology CDS 152160 152636 . - 0 ID=cds-WP_001582770.1;Parent=gene-CCO46_RS03670;Dbxref=GenBank:WP_001582770.1;Name=WP_001582770.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=CCO46_RS03670;product=FxsA family protein;protein_id=WP_001582770.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 152977 154413 . + . ID=gene-CCO46_RS03675;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=CCO46_RS03675;old_locus_tag=CCO46_03675 NZ_NPOH01000002.1 Protein Homology CDS 152977 154413 . + 0 ID=cds-WP_000069440.1;Parent=gene-CCO46_RS03675;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=CCO46_RS03675;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 154528 155829 . + . ID=gene-CCO46_RS03680;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=CCO46_RS03680;old_locus_tag=CCO46_03680 NZ_NPOH01000002.1 Protein Homology CDS 154528 155829 . + 0 ID=cds-WP_000637595.1;Parent=gene-CCO46_RS03680;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=CCO46_RS03680;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 155950 156297 . + . ID=gene-CCO46_RS03685;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=CCO46_RS03685;old_locus_tag=CCO46_03685 NZ_NPOH01000002.1 Protein Homology CDS 155950 156297 . + 0 ID=cds-WP_000887832.1;Parent=gene-CCO46_RS03685;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=CCO46_RS03685;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 156273 157976 . + . ID=gene-CCO46_RS03690;Name=CCO46_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03690;old_locus_tag=CCO46_03690 NZ_NPOH01000002.1 Protein Homology CDS 156273 157976 . + 0 ID=cds-WP_058331920.1;Parent=gene-CCO46_RS03690;Dbxref=GenBank:WP_058331920.1;Name=WP_058331920.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=CCO46_RS03690;product=protein-disulfide reductase DsbD;protein_id=WP_058331920.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 158013 158588 . + . ID=gene-CCO46_RS03695;Name=CCO46_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03695;old_locus_tag=CCO46_03695 NZ_NPOH01000002.1 Protein Homology CDS 158013 158588 . + 0 ID=cds-WP_001188509.1;Parent=gene-CCO46_RS03695;Dbxref=GenBank:WP_001188509.1;Name=WP_001188509.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=CCO46_RS03695;product=transcriptional regulator;protein_id=WP_001188509.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 158704 158779 . + . ID=gene-CCO46_RS03700;Name=CCO46_RS03700;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS03700;old_locus_tag=CCO46_03700 NZ_NPOH01000002.1 tRNAscan-SE tRNA 158704 158779 . + . ID=rna-CCO46_RS03700;Parent=gene-CCO46_RS03700;anticodon=(pos:158737..158739);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS03700;product=tRNA-Phe NZ_NPOH01000002.1 tRNAscan-SE exon 158704 158779 . + . ID=exon-CCO46_RS03700-1;Parent=rna-CCO46_RS03700;anticodon=(pos:158737..158739);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS03700;product=tRNA-Phe NZ_NPOH01000002.1 RefSeq gene 158864 159163 . - . ID=gene-CCO46_RS03705;Name=CCO46_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03705;old_locus_tag=CCO46_03705 NZ_NPOH01000002.1 Protein Homology CDS 158864 159163 . - 0 ID=cds-WP_097363233.1;Parent=gene-CCO46_RS03705;Dbxref=GenBank:WP_097363233.1;Name=WP_097363233.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807561.1;locus_tag=CCO46_RS03705;product=SymE family type I addiction module toxin;protein_id=WP_097363233.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 159506 160765 . - . ID=gene-CCO46_RS03710;Name=CCO46_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03710;old_locus_tag=CCO46_03710 NZ_NPOH01000002.1 Protein Homology CDS 159506 160765 . - 0 ID=cds-WP_097363234.1;Parent=gene-CCO46_RS03710;Dbxref=GenBank:WP_097363234.1;Name=WP_097363234.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241132.1;locus_tag=CCO46_RS03710;product=restriction endonuclease subunit S;protein_id=WP_097363234.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 160758 162392 . - . ID=gene-CCO46_RS03715;Name=CCO46_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03715;old_locus_tag=CCO46_03715 NZ_NPOH01000002.1 Protein Homology CDS 160758 162392 . - 0 ID=cds-WP_097363235.1;Parent=gene-CCO46_RS03715;Dbxref=GenBank:WP_097363235.1;Name=WP_097363235.1;Ontology_term=GO:0009307,GO:0003677,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000229742.1;locus_tag=CCO46_RS03715;product=HsdM family class I SAM-dependent methyltransferase;protein_id=WP_097363235.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 162386 165481 . - . ID=gene-CCO46_RS03720;Name=CCO46_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03720;old_locus_tag=CCO46_03720 NZ_NPOH01000002.1 Protein Homology CDS 162386 165481 . - 0 ID=cds-WP_097363236.1;Parent=gene-CCO46_RS03720;Dbxref=GenBank:WP_097363236.1;Name=WP_097363236.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673071.1;locus_tag=CCO46_RS03720;product=type I restriction endonuclease subunit R;protein_id=WP_097363236.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 165772 166554 . + . ID=gene-CCO46_RS03725;Name=CCO46_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03725;old_locus_tag=CCO46_03725 NZ_NPOH01000002.1 Protein Homology CDS 165772 166554 . + 0 ID=cds-WP_080160348.1;Parent=gene-CCO46_RS03725;Dbxref=GenBank:WP_080160348.1;Name=WP_080160348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001424109.1;locus_tag=CCO46_RS03725;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_080160348.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 166541 167470 . + . ID=gene-CCO46_RS03730;Name=CCO46_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03730;old_locus_tag=CCO46_03730 NZ_NPOH01000002.1 Protein Homology CDS 166541 167470 . + 0 ID=cds-WP_097363237.1;Parent=gene-CCO46_RS03730;Dbxref=GenBank:WP_097363237.1;Name=WP_097363237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365810.1;locus_tag=CCO46_RS03730;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_097363237.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 167695 168852 . - . ID=gene-CCO46_RS03735;Name=CCO46_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03735;old_locus_tag=CCO46_03735 NZ_NPOH01000002.1 Protein Homology CDS 167695 168852 . - 0 ID=cds-WP_058331914.1;Parent=gene-CCO46_RS03735;Dbxref=GenBank:WP_058331914.1;Name=WP_058331914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806483.1;locus_tag=CCO46_RS03735;product=DUF3322 domain-containing protein;protein_id=WP_058331914.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 168854 170200 . - . ID=gene-CCO46_RS25700;Name=CCO46_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25700 NZ_NPOH01000002.1 Protein Homology CDS 168854 170200 . - 0 ID=cds-WP_336603349.1;Parent=gene-CCO46_RS25700;Dbxref=GenBank:WP_336603349.1;Name=WP_336603349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002379578.1;locus_tag=CCO46_RS25700;product=SbcC/MukB-like Walker B domain-containing protein;protein_id=WP_336603349.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 171938 172141 . - . ID=gene-CCO46_RS25705;Name=CCO46_RS25705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25705;partial=true;pseudo=true;start_range=.,171938 NZ_NPOH01000002.1 Protein Homology CDS 171938 172141 . - 0 ID=cds-CCO46_RS25705;Parent=gene-CCO46_RS25705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024944.6;locus_tag=CCO46_RS25705;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,171938;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 172138 172887 . - . ID=gene-CCO46_RS03745;Name=CCO46_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03745;old_locus_tag=CCO46_03745 NZ_NPOH01000002.1 Protein Homology CDS 172138 172887 . - 0 ID=cds-WP_170947411.1;Parent=gene-CCO46_RS03745;Dbxref=GenBank:WP_170947411.1;Name=WP_170947411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000145526.1;locus_tag=CCO46_RS03745;product=DUF4194 domain-containing protein;protein_id=WP_170947411.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 172893 174389 . - . ID=gene-CCO46_RS03750;Name=CCO46_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03750;old_locus_tag=CCO46_03750 NZ_NPOH01000002.1 Protein Homology CDS 172893 174389 . - 0 ID=cds-WP_076727868.1;Parent=gene-CCO46_RS03750;Dbxref=GenBank:WP_076727868.1;Name=WP_076727868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806486.1;locus_tag=CCO46_RS03750;product=DUF3375 domain-containing protein;protein_id=WP_076727868.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 174983 175136 . + . ID=gene-CCO46_RS03755;Name=CCO46_RS03755;end_range=175136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS03755;partial=true;pseudo=true NZ_NPOH01000002.1 Protein Homology CDS 174983 175136 . + 0 ID=cds-CCO46_RS03755;Parent=gene-CCO46_RS03755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=175136,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975783.1;locus_tag=CCO46_RS03755;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 175123 175275 . + . ID=gene-CCO46_RS25810;Name=CCO46_RS25810;end_range=175275,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25810;old_locus_tag=CCO46_03755;partial=true;pseudo=true;start_range=.,175123 NZ_NPOH01000002.1 Protein Homology CDS 175123 175275 . + 0 ID=cds-CCO46_RS25810;Parent=gene-CCO46_RS25810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=175275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954536.1;locus_tag=CCO46_RS25810;partial=true;product=integrase;pseudo=true;start_range=.,175123;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 175276 175673 . - . ID=gene-CCO46_RS03765;Name=CCO46_RS03765;end_range=175673,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS03765;old_locus_tag=CCO46_03760;partial=true;pseudo=true;start_range=.,175276 NZ_NPOH01000002.1 Protein Homology CDS 175276 175673 . - 0 ID=cds-CCO46_RS03765;Parent=gene-CCO46_RS03765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=175673,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=CCO46_RS03765;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,175276;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 175890 176381 . - . ID=gene-CCO46_RS03770;Name=CCO46_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03770;old_locus_tag=CCO46_03765 NZ_NPOH01000002.1 Protein Homology CDS 175890 176381 . - 0 ID=cds-WP_058331912.1;Parent=gene-CCO46_RS03770;Dbxref=GenBank:WP_058331912.1;Name=WP_058331912.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=CCO46_RS03770;product=GNAT family N-acetyltransferase;protein_id=WP_058331912.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 176378 176671 . - . ID=gene-CCO46_RS03775;Name=CCO46_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03775;old_locus_tag=CCO46_03770 NZ_NPOH01000002.1 Protein Homology CDS 176378 176671 . - 0 ID=cds-WP_058331911.1;Parent=gene-CCO46_RS03775;Dbxref=GenBank:WP_058331911.1;Name=WP_058331911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228835.1;locus_tag=CCO46_RS03775;product=DUF1778 domain-containing protein;protein_id=WP_058331911.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 177162 177385 . + . ID=gene-CCO46_RS24875;Name=CCO46_RS24875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24875;pseudo=true NZ_NPOH01000002.1 Protein Homology CDS 177162 177385 . + 0 ID=cds-CCO46_RS24875;Parent=gene-CCO46_RS24875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=CCO46_RS24875;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 177650 178525 . + . ID=gene-CCO46_RS03780;Name=CCO46_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03780;old_locus_tag=CCO46_03775 NZ_NPOH01000002.1 Protein Homology CDS 177650 178525 . + 0 ID=cds-WP_076727861.1;Parent=gene-CCO46_RS03780;Dbxref=GenBank:WP_076727861.1;Name=WP_076727861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=CCO46_RS03780;product=AraC family transcriptional regulator;protein_id=WP_076727861.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 178537 178809 . + . ID=gene-CCO46_RS03785;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=CCO46_RS03785;old_locus_tag=CCO46_03780 NZ_NPOH01000002.1 Protein Homology CDS 178537 178809 . + 0 ID=cds-WP_001519408.1;Parent=gene-CCO46_RS03785;Dbxref=GenBank:WP_001519408.1;Name=WP_001519408.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899482.1;locus_tag=CCO46_RS03785;product=transcriptional regulator RtsB;protein_id=WP_001519408.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 179006 180973 . - . ID=gene-CCO46_RS03790;Name=CCO46_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03790;old_locus_tag=CCO46_03785 NZ_NPOH01000002.1 Protein Homology CDS 179006 180973 . - 0 ID=cds-WP_080160351.1;Parent=gene-CCO46_RS03790;Dbxref=GenBank:WP_080160351.1;Name=WP_080160351.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999321.1;locus_tag=CCO46_RS03790;product=ATP-binding cassette domain-containing protein;protein_id=WP_080160351.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 180966 181334 . - . ID=gene-CCO46_RS03795;Name=CCO46_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03795;old_locus_tag=CCO46_03790 NZ_NPOH01000002.1 Protein Homology CDS 180966 181334 . - 0 ID=cds-WP_231130998.1;Parent=gene-CCO46_RS03795;Dbxref=GenBank:WP_231130998.1;Name=WP_231130998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015460779.1;locus_tag=CCO46_RS03795;product=hypothetical protein;protein_id=WP_231130998.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 181396 182631 . - . ID=gene-CCO46_RS03800;Name=CCO46_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03800;old_locus_tag=CCO46_03795 NZ_NPOH01000002.1 Protein Homology CDS 181396 182631 . - 0 ID=cds-WP_058331910.1;Parent=gene-CCO46_RS03800;Dbxref=GenBank:WP_058331910.1;Name=WP_058331910.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060876.1;locus_tag=CCO46_RS03800;product=HlyD family secretion protein;protein_id=WP_058331910.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 182633 183850 . - . ID=gene-CCO46_RS03805;Name=CCO46_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03805;old_locus_tag=CCO46_03800 NZ_NPOH01000002.1 Protein Homology CDS 182633 183850 . - 0 ID=cds-WP_076727856.1;Parent=gene-CCO46_RS03805;Dbxref=GenBank:WP_076727856.1;Name=WP_076727856.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855874.1;locus_tag=CCO46_RS03805;product=TolC family protein;protein_id=WP_076727856.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 183840 184889 . - . ID=gene-CCO46_RS03810;Name=CCO46_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03810;old_locus_tag=CCO46_03805 NZ_NPOH01000002.1 Protein Homology CDS 183840 184889 . - 0 ID=cds-WP_231130999.1;Parent=gene-CCO46_RS03810;Dbxref=GenBank:WP_231130999.1;Name=WP_231130999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000545578.1;locus_tag=CCO46_RS03810;product=hypothetical protein;protein_id=WP_231130999.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 184852 185298 . - . ID=gene-CCO46_RS03815;Name=CCO46_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03815;old_locus_tag=CCO46_03810 NZ_NPOH01000002.1 Protein Homology CDS 184852 185298 . - 0 ID=cds-WP_058331909.1;Parent=gene-CCO46_RS03815;Dbxref=GenBank:WP_058331909.1;Name=WP_058331909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001271663.1;locus_tag=CCO46_RS03815;product=hypothetical protein;protein_id=WP_058331909.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 185795 194668 . + . ID=gene-CCO46_RS03820;Name=CCO46_RS03820;end_range=194668,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS03820;old_locus_tag=CCO46_03815;partial=true;pseudo=true NZ_NPOH01000002.1 Protein Homology CDS 185795 194668 . + 0 ID=cds-CCO46_RS03820;Parent=gene-CCO46_RS03820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=194668,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039533.5;locus_tag=CCO46_RS03820;partial=true;product=Ig-like domain-containing protein;pseudo=true;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 194720 194959 . + . ID=gene-CCO46_RS25710;Name=CCO46_RS25710;end_range=194959,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25710;partial=true;pseudo=true;start_range=.,194720 NZ_NPOH01000002.1 Protein Homology CDS 194720 194959 . + 0 ID=cds-CCO46_RS25710;Parent=gene-CCO46_RS25710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=194959,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033510.3;locus_tag=CCO46_RS25710;partial=true;product=hypothetical protein;pseudo=true;start_range=.,194720;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 194972 195106 . + . ID=gene-CCO46_RS25715;Name=CCO46_RS25715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25715;partial=true;pseudo=true;start_range=.,194972 NZ_NPOH01000002.1 Protein Homology CDS 194972 195106 . + 0 ID=cds-CCO46_RS25715;Parent=gene-CCO46_RS25715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=CCO46_RS25715;partial=true;product=hypothetical protein;pseudo=true;start_range=.,194972;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 195400 196305 . - . ID=gene-CCO46_RS03825;Name=CCO46_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03825;old_locus_tag=CCO46_03820 NZ_NPOH01000002.1 Protein Homology CDS 195400 196305 . - 0 ID=cds-WP_001268200.1;Parent=gene-CCO46_RS03825;Dbxref=GenBank:WP_001268200.1;Name=WP_001268200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=CCO46_RS03825;product=SdiA-regulated domain-containing protein;protein_id=WP_001268200.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 196608 198008 . + . ID=gene-CCO46_RS03830;Name=CCO46_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03830;old_locus_tag=CCO46_03825 NZ_NPOH01000002.1 Protein Homology CDS 196608 198008 . + 0 ID=cds-WP_000773784.1;Parent=gene-CCO46_RS03830;Dbxref=GenBank:WP_000773784.1;Name=WP_000773784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=CCO46_RS03830;product=DUF7594 domain-containing protein;protein_id=WP_000773784.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 198092 198685 . - . ID=gene-CCO46_RS03835;Name=CCO46_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03835;old_locus_tag=CCO46_03830 NZ_NPOH01000002.1 Protein Homology CDS 198092 198685 . - 0 ID=cds-WP_001584224.1;Parent=gene-CCO46_RS03835;Dbxref=GenBank:WP_001584224.1;Name=WP_001584224.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=CCO46_RS03835;product=TorD/DmsD family molecular chaperone;protein_id=WP_001584224.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 198761 199534 . - . ID=gene-CCO46_RS03840;Name=CCO46_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03840;old_locus_tag=CCO46_03835 NZ_NPOH01000002.1 Protein Homology CDS 198761 199534 . - 0 ID=cds-WP_017441232.1;Parent=gene-CCO46_RS03840;Dbxref=GenBank:WP_017441232.1;Name=WP_017441232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=CCO46_RS03840;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_017441232.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 199527 200153 . - . ID=gene-CCO46_RS03845;Name=CCO46_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03845;old_locus_tag=CCO46_03840 NZ_NPOH01000002.1 Protein Homology CDS 199527 200153 . - 0 ID=cds-WP_000816143.1;Parent=gene-CCO46_RS03845;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=CCO46_RS03845;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 200167 202596 . - . ID=gene-CCO46_RS03850;Name=CCO46_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03850;old_locus_tag=CCO46_03845 NZ_NPOH01000002.1 Protein Homology CDS 200167 202596 . - 0 ID=cds-WP_140439311.1;Parent=gene-CCO46_RS03850;Dbxref=GenBank:WP_140439311.1;Name=WP_140439311.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=CCO46_RS03850;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_140439311.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 202971 204602 . + . ID=gene-CCO46_RS03855;Name=CCO46_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03855;old_locus_tag=CCO46_03850 NZ_NPOH01000002.1 Protein Homology CDS 202971 204602 . + 0 ID=cds-WP_000682910.1;Parent=gene-CCO46_RS03855;Dbxref=GenBank:WP_000682910.1;Name=WP_000682910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=CCO46_RS03855;product=sensor histidine kinase;protein_id=WP_000682910.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 204599 205318 . + . ID=gene-CCO46_RS03860;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=CCO46_RS03860;old_locus_tag=CCO46_03855 NZ_NPOH01000002.1 Protein Homology CDS 204599 205318 . + 0 ID=cds-WP_000611311.1;Parent=gene-CCO46_RS03860;Dbxref=GenBank:WP_000611311.1;Name=WP_000611311.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=CCO46_RS03860;product=two-component system response regulator DcuR;protein_id=WP_000611311.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 205635 205901 . + . ID=gene-CCO46_RS03865;Name=CCO46_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03865;old_locus_tag=CCO46_03860 NZ_NPOH01000002.1 Protein Homology CDS 205635 205901 . + 0 ID=cds-WP_001530565.1;Parent=gene-CCO46_RS03865;Dbxref=GenBank:WP_001530565.1;Name=WP_001530565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=CCO46_RS03865;product=hypothetical protein;protein_id=WP_001530565.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 206048 207388 . + . ID=gene-CCO46_RS03870;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=CCO46_RS03870;old_locus_tag=CCO46_03865 NZ_NPOH01000002.1 Protein Homology CDS 206048 207388 . + 0 ID=cds-WP_000899149.1;Parent=gene-CCO46_RS03870;Dbxref=GenBank:WP_000899149.1;Name=WP_000899149.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=CCO46_RS03870;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899149.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 207484 209130 . + . ID=gene-CCO46_RS03875;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=CCO46_RS03875;old_locus_tag=CCO46_03870 NZ_NPOH01000002.1 Protein Homology CDS 207484 209130 . + 0 ID=cds-WP_000037190.1;Parent=gene-CCO46_RS03875;Dbxref=GenBank:WP_000037190.1;Name=WP_000037190.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=CCO46_RS03875;product=class I fumarate hydratase FumA;protein_id=WP_000037190.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 209228 210658 . - . ID=gene-CCO46_RS03880;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CCO46_RS03880;old_locus_tag=CCO46_03875 NZ_NPOH01000002.1 Protein Homology CDS 209228 210658 . - 0 ID=cds-WP_000028070.1;Parent=gene-CCO46_RS03880;Dbxref=GenBank:WP_000028070.1;Name=WP_000028070.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=CCO46_RS03880;product=melibiose:sodium transporter MelB;protein_id=WP_000028070.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 210742 212097 . - . ID=gene-CCO46_RS03885;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=CCO46_RS03885;old_locus_tag=CCO46_03880 NZ_NPOH01000002.1 Protein Homology CDS 210742 212097 . - 0 ID=cds-WP_001534541.1;Parent=gene-CCO46_RS03885;Dbxref=GenBank:WP_001534541.1;Name=WP_001534541.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=CCO46_RS03885;product=alpha-galactosidase;protein_id=WP_001534541.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 212366 213298 . + . ID=gene-CCO46_RS03890;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=CCO46_RS03890;old_locus_tag=CCO46_03885 NZ_NPOH01000002.1 Protein Homology CDS 212366 213298 . + 0 ID=cds-WP_080160354.1;Parent=gene-CCO46_RS03890;Dbxref=GenBank:WP_080160354.1;Name=WP_080160354.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=CCO46_RS03890;product=transcriptional regulator MelR;protein_id=WP_080160354.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 213531 215798 . + . ID=gene-CCO46_RS03895;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=CCO46_RS03895;old_locus_tag=CCO46_03890 NZ_NPOH01000002.1 Protein Homology CDS 213531 215798 . + 0 ID=cds-WP_094887735.1;Parent=gene-CCO46_RS03895;Dbxref=GenBank:WP_094887735.1;Name=WP_094887735.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=CCO46_RS03895;product=arginine decarboxylase;protein_id=WP_094887735.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 216095 216856 . + . ID=gene-CCO46_RS03900;Name=CCO46_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03900;old_locus_tag=CCO46_03895 NZ_NPOH01000002.1 Protein Homology CDS 216095 216856 . + 0 ID=cds-WP_001217076.1;Parent=gene-CCO46_RS03900;Dbxref=GenBank:WP_001217076.1;Name=WP_001217076.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=CCO46_RS03900;product=AraC family transcriptional regulator;protein_id=WP_001217076.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 216996 218333 . + . ID=gene-CCO46_RS03905;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=CCO46_RS03905;old_locus_tag=CCO46_03900 NZ_NPOH01000002.1 Protein Homology CDS 216996 218333 . + 0 ID=cds-WP_000093130.1;Parent=gene-CCO46_RS03905;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=CCO46_RS03905;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 218467 220110 . + . ID=gene-CCO46_RS03910;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=CCO46_RS03910;old_locus_tag=CCO46_03905 NZ_NPOH01000002.1 Protein Homology CDS 218467 220110 . + 0 ID=cds-WP_000919294.1;Parent=gene-CCO46_RS03910;Dbxref=GenBank:WP_000919294.1;Name=WP_000919294.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=CCO46_RS03910;product=phosphoethanolamine transferase EptA;protein_id=WP_000919294.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 220107 220775 . + . ID=gene-CCO46_RS03915;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=CCO46_RS03915;old_locus_tag=CCO46_03910 NZ_NPOH01000002.1 Protein Homology CDS 220107 220775 . + 0 ID=cds-WP_000697899.1;Parent=gene-CCO46_RS03915;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=CCO46_RS03915;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 220785 221855 . + . ID=gene-CCO46_RS03920;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=CCO46_RS03920;old_locus_tag=CCO46_03915 NZ_NPOH01000002.1 Protein Homology CDS 220785 221855 . + 0 ID=cds-WP_001212189.1;Parent=gene-CCO46_RS03920;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=CCO46_RS03920;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 221863 221952 . - . ID=gene-CCO46_RS03925;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=CCO46_RS03925;old_locus_tag=CCO46_03920 NZ_NPOH01000002.1 Protein Homology CDS 221863 221952 . - 0 ID=cds-WP_000844399.1;Parent=gene-CCO46_RS03925;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=CCO46_RS03925;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 222022 223524 . - . ID=gene-CCO46_RS03930;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=CCO46_RS03930;old_locus_tag=CCO46_03925 NZ_NPOH01000002.1 Protein Homology CDS 222022 223524 . - 0 ID=cds-WP_000919710.1;Parent=gene-CCO46_RS03930;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=CCO46_RS03930;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 223992 224327 . + . ID=gene-CCO46_RS03935;Name=CCO46_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03935;old_locus_tag=CCO46_03930 NZ_NPOH01000002.1 Protein Homology CDS 223992 224327 . + 0 ID=cds-WP_000056482.1;Parent=gene-CCO46_RS03935;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=CCO46_RS03935;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 224447 224890 . + . ID=gene-CCO46_RS03940;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=CCO46_RS03940;old_locus_tag=CCO46_03935 NZ_NPOH01000002.1 Protein Homology CDS 224447 224890 . + 0 ID=cds-WP_001131301.1;Parent=gene-CCO46_RS03940;Dbxref=GenBank:WP_001131301.1;Name=WP_001131301.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=CCO46_RS03940;product=VOC family metalloprotein YjdN;protein_id=WP_001131301.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 225042 225476 . + . ID=gene-CCO46_RS03945;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=CCO46_RS03945;old_locus_tag=CCO46_03940 NZ_NPOH01000002.1 Protein Homology CDS 225042 225476 . + 0 ID=cds-WP_001549776.1;Parent=gene-CCO46_RS03945;Dbxref=GenBank:WP_001549776.1;Name=WP_001549776.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=CCO46_RS03945;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001549776.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 225734 226642 . + . ID=gene-CCO46_RS03950;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=CCO46_RS03950;old_locus_tag=CCO46_03945 NZ_NPOH01000002.1 Protein Homology CDS 225734 226642 . + 0 ID=cds-WP_000457033.1;Parent=gene-CCO46_RS03950;Dbxref=GenBank:WP_000457033.1;Name=WP_000457033.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=CCO46_RS03950;product=lipid A hydroxylase LpxO;protein_id=WP_000457033.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 226997 229144 . + . ID=gene-CCO46_RS03955;Name=CCO46_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS03955;old_locus_tag=CCO46_03950 NZ_NPOH01000002.1 Protein Homology CDS 226997 229144 . + 0 ID=cds-WP_011233236.1;Parent=gene-CCO46_RS03955;Dbxref=GenBank:WP_011233236.1;Name=WP_011233236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=CCO46_RS03955;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WP_011233236.1;transl_except=(pos:227414..227416%2Caa:Sec);transl_table=11 NZ_NPOH01000002.1 RefSeq gene 229321 230010 . + . ID=gene-CCO46_RS03960;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=CCO46_RS03960;old_locus_tag=CCO46_03955 NZ_NPOH01000002.1 Protein Homology CDS 229321 230010 . + 0 ID=cds-WP_000771454.1;Parent=gene-CCO46_RS03960;Dbxref=GenBank:WP_000771454.1;Name=WP_000771454.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=CCO46_RS03960;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000771454.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 230168 231478 . - . ID=gene-CCO46_RS03965;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=CCO46_RS03965;old_locus_tag=CCO46_03960 NZ_NPOH01000002.1 Protein Homology CDS 230168 231478 . - 0 ID=cds-WP_080160357.1;Parent=gene-CCO46_RS03965;Dbxref=GenBank:WP_080160357.1;Name=WP_080160357.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=CCO46_RS03965;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_080160357.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 231823 232443 . - . ID=gene-CCO46_RS03970;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=CCO46_RS03970;old_locus_tag=CCO46_03965 NZ_NPOH01000002.1 Protein Homology CDS 231823 232443 . - 0 ID=cds-WP_000083232.1;Parent=gene-CCO46_RS03970;Dbxref=GenBank:WP_000083232.1;Name=WP_000083232.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=CCO46_RS03970;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000083232.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 232440 234678 . - . ID=gene-CCO46_RS03980;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=pseudogene;locus_tag=CCO46_RS03980;old_locus_tag=CCO46_03975;pseudo=true NZ_NPOH01000002.1 Protein Homology CDS 232440 234678 . - 0 ID=cds-CCO46_RS03980;Parent=gene-CCO46_RS03980;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO46_RS03980;product=heme lyase NrfEFG subunit NrfF;pseudo=true;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 234671 235627 . - . ID=gene-CCO46_RS03985;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=CCO46_RS03985;old_locus_tag=CCO46_03980 NZ_NPOH01000002.1 Protein Homology CDS 234671 235627 . - 0 ID=cds-WP_000199624.1;Parent=gene-CCO46_RS03985;Dbxref=GenBank:WP_000199624.1;Name=WP_000199624.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=CCO46_RS03985;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000199624.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 235624 236295 . - . ID=gene-CCO46_RS03990;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=CCO46_RS03990;old_locus_tag=CCO46_03985 NZ_NPOH01000002.1 Protein Homology CDS 235624 236295 . - 0 ID=cds-WP_001278025.1;Parent=gene-CCO46_RS03990;Dbxref=GenBank:WP_001278025.1;Name=WP_001278025.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=CCO46_RS03990;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278025.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 236292 236858 . - . ID=gene-CCO46_RS03995;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=CCO46_RS03995;old_locus_tag=CCO46_03990 NZ_NPOH01000002.1 Protein Homology CDS 236292 236858 . - 0 ID=cds-WP_000115065.1;Parent=gene-CCO46_RS03995;Dbxref=GenBank:WP_000115065.1;Name=WP_000115065.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=CCO46_RS03995;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115065.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 236903 238339 . - . ID=gene-CCO46_RS04000;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=CCO46_RS04000;old_locus_tag=CCO46_03995 NZ_NPOH01000002.1 Protein Homology CDS 236903 238339 . - 0 ID=cds-WP_094887731.1;Parent=gene-CCO46_RS04000;Dbxref=GenBank:WP_094887731.1;Name=WP_094887731.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=CCO46_RS04000;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_094887731.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 238771 240729 . + . ID=gene-CCO46_RS04010;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=CCO46_RS04010;old_locus_tag=CCO46_04005 NZ_NPOH01000002.1 Protein Homology CDS 238771 240729 . + 0 ID=cds-WP_000083877.1;Parent=gene-CCO46_RS04010;Dbxref=GenBank:WP_000083877.1;Name=WP_000083877.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=CCO46_RS04010;product=acetate--CoA ligase;protein_id=WP_000083877.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 240969 241283 . + . ID=gene-CCO46_RS04015;Name=CCO46_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04015;old_locus_tag=CCO46_04010 NZ_NPOH01000002.1 Protein Homology CDS 240969 241283 . + 0 ID=cds-WP_000999620.1;Parent=gene-CCO46_RS04015;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=CCO46_RS04015;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 241280 242929 . + . ID=gene-CCO46_RS04020;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=CCO46_RS04020;old_locus_tag=CCO46_04015 NZ_NPOH01000002.1 Protein Homology CDS 241280 242929 . + 0 ID=cds-WP_000832536.1;Parent=gene-CCO46_RS04020;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=CCO46_RS04020;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 242968 243657 . - . ID=gene-CCO46_RS04025;Name=CCO46_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04025;old_locus_tag=CCO46_04020 NZ_NPOH01000002.1 Protein Homology CDS 242968 243657 . - 0 ID=cds-WP_001067096.1;Parent=gene-CCO46_RS04025;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=CCO46_RS04025;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 243650 244060 . - . ID=gene-CCO46_RS04030;Name=CCO46_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04030;old_locus_tag=CCO46_04025 NZ_NPOH01000002.1 Protein Homology CDS 243650 244060 . - 0 ID=cds-WP_000257347.1;Parent=gene-CCO46_RS04030;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=CCO46_RS04030;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 244164 245051 . + . ID=gene-CCO46_RS04035;Name=CCO46_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04035;old_locus_tag=CCO46_04030 NZ_NPOH01000002.1 Protein Homology CDS 244164 245051 . + 0 ID=cds-WP_000354962.1;Parent=gene-CCO46_RS04035;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=CCO46_RS04035;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 245146 246792 . - . ID=gene-CCO46_RS04040;Name=CCO46_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04040;old_locus_tag=CCO46_04035 NZ_NPOH01000002.1 Protein Homology CDS 245146 246792 . - 0 ID=cds-WP_001536604.1;Parent=gene-CCO46_RS04040;Dbxref=GenBank:WP_001536604.1;Name=WP_001536604.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=CCO46_RS04040;product=Na+/H+ antiporter;protein_id=WP_001536604.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 246942 248291 . - . ID=gene-CCO46_RS04050;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=CCO46_RS04050;old_locus_tag=CCO46_04045 NZ_NPOH01000002.1 Protein Homology CDS 246942 248291 . - 0 ID=cds-WP_000106906.1;Parent=gene-CCO46_RS04050;Dbxref=GenBank:WP_000106906.1;Name=WP_000106906.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=CCO46_RS04050;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106906.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 248638 249306 . - . ID=gene-CCO46_RS04060;Name=CCO46_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04060;old_locus_tag=CCO46_04055 NZ_NPOH01000002.1 Protein Homology CDS 248638 249306 . - 0 ID=cds-WP_058331896.1;Parent=gene-CCO46_RS04060;Dbxref=GenBank:WP_058331896.1;Name=WP_058331896.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=CCO46_RS04060;product=glutathione S-transferase family protein;protein_id=WP_058331896.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 249599 250057 . - . ID=gene-CCO46_RS04065;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=CCO46_RS04065;old_locus_tag=CCO46_04060 NZ_NPOH01000002.1 Protein Homology CDS 249599 250057 . - 0 ID=cds-WP_000412686.1;Parent=gene-CCO46_RS04065;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=CCO46_RS04065;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 250144 250467 . + . ID=gene-CCO46_RS04070;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=CCO46_RS04070;old_locus_tag=CCO46_04065 NZ_NPOH01000002.1 Protein Homology CDS 250144 250467 . + 0 ID=cds-WP_000019483.1;Parent=gene-CCO46_RS04070;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=CCO46_RS04070;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 250455 252056 . - . ID=gene-CCO46_RS04075;Name=CCO46_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04075;old_locus_tag=CCO46_04070 NZ_NPOH01000002.1 Protein Homology CDS 250455 252056 . - 0 ID=cds-WP_061372460.1;Parent=gene-CCO46_RS04075;Dbxref=GenBank:WP_061372460.1;Name=WP_061372460.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=CCO46_RS04075;product=EAL domain-containing protein;protein_id=WP_061372460.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 252618 252899 . + . ID=gene-CCO46_RS04080;Name=CCO46_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04080;old_locus_tag=CCO46_04075 NZ_NPOH01000002.1 Protein Homology CDS 252618 252899 . + 0 ID=cds-WP_000719058.1;Parent=gene-CCO46_RS04080;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=CCO46_RS04080;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 253324 255390 . - . ID=gene-CCO46_RS04085;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=CCO46_RS04085;old_locus_tag=CCO46_04080 NZ_NPOH01000002.1 Protein Homology CDS 253324 255390 . - 0 ID=cds-WP_061372459.1;Parent=gene-CCO46_RS04085;Dbxref=GenBank:WP_061372459.1;Name=WP_061372459.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954991.1;locus_tag=CCO46_RS04085;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_061372459.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 255430 272418 . - . ID=gene-CCO46_RS04090;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=CCO46_RS04090;old_locus_tag=CCO46_04085 NZ_NPOH01000002.1 Protein Homology CDS 255430 272418 . - 0 ID=cds-WP_097363241.1;Parent=gene-CCO46_RS04090;Dbxref=GenBank:WP_097363241.1;Name=WP_097363241.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000527115.1;locus_tag=CCO46_RS04090;product=non-fimbrial adhesin SiiE;protein_id=WP_097363241.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 272435 273712 . - . ID=gene-CCO46_RS04095;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=CCO46_RS04095;old_locus_tag=CCO46_04090 NZ_NPOH01000002.1 Protein Homology CDS 272435 273712 . - 0 ID=cds-WP_076727784.1;Parent=gene-CCO46_RS04095;Dbxref=GenBank:WP_076727784.1;Name=WP_076727784.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=CCO46_RS04095;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_076727784.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 273709 275028 . - . ID=gene-CCO46_RS04100;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=CCO46_RS04100;old_locus_tag=CCO46_04095 NZ_NPOH01000002.1 Protein Homology CDS 273709 275028 . - 0 ID=cds-WP_097363242.1;Parent=gene-CCO46_RS04100;Dbxref=GenBank:WP_097363242.1;Name=WP_097363242.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=CCO46_RS04100;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_097363242.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 275018 276406 . - . ID=gene-CCO46_RS04105;Name=CCO46_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04105;old_locus_tag=CCO46_04100 NZ_NPOH01000002.1 Protein Homology CDS 275018 276406 . - 0 ID=cds-WP_058331893.1;Parent=gene-CCO46_RS04105;Dbxref=GenBank:WP_058331893.1;Name=WP_058331893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=CCO46_RS04105;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_058331893.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 276403 277035 . - . ID=gene-CCO46_RS04110;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=CCO46_RS04110;old_locus_tag=CCO46_04105 NZ_NPOH01000002.1 Protein Homology CDS 276403 277035 . - 0 ID=cds-WP_000389235.1;Parent=gene-CCO46_RS04110;Dbxref=GenBank:WP_000389235.1;Name=WP_000389235.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=CCO46_RS04110;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389235.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 278285 278815 . - . ID=gene-CCO46_RS04115;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=CCO46_RS04115;old_locus_tag=CCO46_04110 NZ_NPOH01000002.1 Protein Homology CDS 278285 278815 . - 0 ID=cds-WP_000168322.1;Parent=gene-CCO46_RS04115;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=CCO46_RS04115;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 279063 281888 . + . ID=gene-CCO46_RS04125;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CCO46_RS04125;old_locus_tag=CCO46_04120 NZ_NPOH01000002.1 Protein Homology CDS 279063 281888 . + 0 ID=cds-WP_000357725.1;Parent=gene-CCO46_RS04125;Dbxref=GenBank:WP_000357725.1;Name=WP_000357725.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=CCO46_RS04125;product=excinuclease ABC subunit UvrA;protein_id=WP_000357725.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 282020 282475 . + . ID=gene-CCO46_RS04130;Name=CCO46_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04130;old_locus_tag=CCO46_04125 NZ_NPOH01000002.1 Protein Homology CDS 282020 282475 . + 0 ID=cds-WP_094887829.1;Parent=gene-CCO46_RS04130;Dbxref=GenBank:WP_094887829.1;Name=WP_094887829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=CCO46_RS04130;product=hypothetical protein;protein_id=WP_094887829.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 282462 282800 . + . ID=gene-CCO46_RS04135;Name=CCO46_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04135;old_locus_tag=CCO46_04130 NZ_NPOH01000002.1 Protein Homology CDS 282462 282800 . + 0 ID=cds-WP_000146597.1;Parent=gene-CCO46_RS04135;Dbxref=GenBank:WP_000146597.1;Name=WP_000146597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=CCO46_RS04135;product=hypothetical protein;protein_id=WP_000146597.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 282801 283157 . - . ID=gene-CCO46_RS04140;Name=CCO46_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04140;old_locus_tag=CCO46_04135 NZ_NPOH01000002.1 Protein Homology CDS 282801 283157 . - 0 ID=cds-WP_000155665.1;Parent=gene-CCO46_RS04140;Dbxref=GenBank:WP_000155665.1;Name=WP_000155665.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=CCO46_RS04140;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155665.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 283160 283576 . - . ID=gene-CCO46_RS04145;Name=CCO46_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04145;old_locus_tag=CCO46_04140 NZ_NPOH01000002.1 Protein Homology CDS 283160 283576 . - 0 ID=cds-WP_000270390.1;Parent=gene-CCO46_RS04145;Dbxref=GenBank:WP_000270390.1;Name=WP_000270390.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=CCO46_RS04145;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270390.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 283705 284418 . - . ID=gene-CCO46_RS04150;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=CCO46_RS04150;old_locus_tag=CCO46_04145 NZ_NPOH01000002.1 Protein Homology CDS 283705 284418 . - 0 ID=cds-WP_000724435.1;Parent=gene-CCO46_RS04150;Dbxref=GenBank:WP_000724435.1;Name=WP_000724435.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=CCO46_RS04150;product=acid phosphatase AphA;protein_id=WP_000724435.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 284605 285798 . - . ID=gene-CCO46_RS04155;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=CCO46_RS04155;old_locus_tag=CCO46_04150 NZ_NPOH01000002.1 Protein Homology CDS 284605 285798 . - 0 ID=cds-WP_000486910.1;Parent=gene-CCO46_RS04155;Dbxref=GenBank:WP_000486910.1;Name=WP_000486910.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=CCO46_RS04155;product=aromatic amino acid transaminase;protein_id=WP_000486910.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 285984 287063 . - . ID=gene-CCO46_RS04165;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CCO46_RS04165;old_locus_tag=CCO46_04160 NZ_NPOH01000002.1 Protein Homology CDS 285984 287063 . - 0 ID=cds-WP_001147296.1;Parent=gene-CCO46_RS04165;Dbxref=GenBank:WP_001147296.1;Name=WP_001147296.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=CCO46_RS04165;product=alanine racemase;protein_id=WP_001147296.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 287095 288510 . - . ID=gene-CCO46_RS04170;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CCO46_RS04170;old_locus_tag=CCO46_04165 NZ_NPOH01000002.1 Protein Homology CDS 287095 288510 . - 0 ID=cds-WP_000918353.1;Parent=gene-CCO46_RS04170;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=CCO46_RS04170;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 288575 289558 . + . ID=gene-CCO46_RS04175;Name=CCO46_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04175;old_locus_tag=CCO46_04170 NZ_NPOH01000002.1 Protein Homology CDS 288575 289558 . + 0 ID=cds-WP_000235555.1;Parent=gene-CCO46_RS04175;Dbxref=GenBank:WP_000235555.1;Name=WP_000235555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=CCO46_RS04175;product=quinone oxidoreductase;protein_id=WP_000235555.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 289733 289975 . - . ID=gene-CCO46_RS04180;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=CCO46_RS04180;old_locus_tag=CCO46_04175 NZ_NPOH01000002.1 Protein Homology CDS 289733 289975 . - 0 ID=cds-WP_000891414.1;Parent=gene-CCO46_RS04180;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=CCO46_RS04180;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 290143 291141 . - . ID=gene-CCO46_RS04185;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=CCO46_RS04185;old_locus_tag=CCO46_04180 NZ_NPOH01000002.1 Protein Homology CDS 290143 291141 . - 0 ID=cds-WP_001825318.1;Parent=gene-CCO46_RS04185;Dbxref=GenBank:WP_001825318.1;Name=WP_001825318.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=CCO46_RS04185;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001825318.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 291229 292539 . - . ID=gene-CCO46_RS04190;Name=CCO46_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04190;old_locus_tag=CCO46_04185 NZ_NPOH01000002.1 Protein Homology CDS 291229 292539 . - 0 ID=cds-WP_001039337.1;Parent=gene-CCO46_RS04190;Dbxref=GenBank:WP_001039337.1;Name=WP_001039337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=CCO46_RS04190;product=conjugal transfer protein TraF;protein_id=WP_001039337.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 292786 293301 . + . ID=gene-CCO46_RS04195;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=CCO46_RS04195;old_locus_tag=CCO46_04190 NZ_NPOH01000002.1 Protein Homology CDS 292786 293301 . + 0 ID=cds-WP_000416271.1;Parent=gene-CCO46_RS04195;Dbxref=GenBank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=CCO46_RS04195;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 293400 293609 . - . ID=gene-CCO46_RS04200;Name=CCO46_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04200;old_locus_tag=CCO46_04195 NZ_NPOH01000002.1 Protein Homology CDS 293400 293609 . - 0 ID=cds-WP_001030592.1;Parent=gene-CCO46_RS04200;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=CCO46_RS04200;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 293631 293744 . - . ID=gene-CCO46_RS04205;Name=CCO46_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04205;old_locus_tag=CCO46_04200 NZ_NPOH01000002.1 Protein Homology CDS 293631 293744 . - 0 ID=cds-WP_001575282.1;Parent=gene-CCO46_RS04205;Dbxref=GenBank:WP_001575282.1;Name=WP_001575282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=CCO46_RS04205;product=hypothetical protein;protein_id=WP_001575282.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 293741 295066 . - . ID=gene-CCO46_RS04210;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=CCO46_RS04210;old_locus_tag=CCO46_04205 NZ_NPOH01000002.1 Protein Homology CDS 293741 295066 . - 0 ID=cds-WP_058331891.1;Parent=gene-CCO46_RS04210;Dbxref=GenBank:WP_058331891.1;Name=WP_058331891.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=CCO46_RS04210;product=MATE family efflux transporter DinF;protein_id=WP_058331891.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 295245 295853 . - . ID=gene-CCO46_RS04215;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CCO46_RS04215;old_locus_tag=CCO46_04210 NZ_NPOH01000002.1 Protein Homology CDS 295245 295853 . - 0 ID=cds-WP_000646079.1;Parent=gene-CCO46_RS04215;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=CCO46_RS04215;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 295962 296330 . - . ID=gene-CCO46_RS04220;Name=CCO46_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04220;old_locus_tag=CCO46_04215 NZ_NPOH01000002.1 Protein Homology CDS 295962 296330 . - 0 ID=cds-WP_000002900.1;Parent=gene-CCO46_RS04220;Dbxref=GenBank:WP_000002900.1;Name=WP_000002900.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=CCO46_RS04220;product=diacylglycerol kinase;protein_id=WP_000002900.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 296501 298921 . + . ID=gene-CCO46_RS04225;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=CCO46_RS04225;old_locus_tag=CCO46_04220 NZ_NPOH01000002.1 Protein Homology CDS 296501 298921 . + 0 ID=cds-WP_000017360.1;Parent=gene-CCO46_RS04225;Dbxref=GenBank:WP_000017360.1;Name=WP_000017360.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=CCO46_RS04225;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017360.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 299020 299892 . - . ID=gene-CCO46_RS04230;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=CCO46_RS04230;old_locus_tag=CCO46_04225 NZ_NPOH01000002.1 Protein Homology CDS 299020 299892 . - 0 ID=cds-WP_000455246.1;Parent=gene-CCO46_RS04230;Dbxref=GenBank:WP_000455246.1;Name=WP_000455246.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=CCO46_RS04230;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455246.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 299906 300403 . - . ID=gene-CCO46_RS04235;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=CCO46_RS04235;old_locus_tag=CCO46_04230 NZ_NPOH01000002.1 Protein Homology CDS 299906 300403 . - 0 ID=cds-WP_000019219.1;Parent=gene-CCO46_RS04235;Dbxref=GenBank:WP_000019219.1;Name=WP_000019219.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=CCO46_RS04235;product=chorismate lyase;protein_id=WP_000019219.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 300585 301502 . - . ID=gene-CCO46_RS04240;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=CCO46_RS04240;old_locus_tag=CCO46_04235 NZ_NPOH01000002.1 Protein Homology CDS 300585 301502 . - 0 ID=cds-WP_000782497.1;Parent=gene-CCO46_RS04240;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=CCO46_RS04240;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 301666 303024 . - . ID=gene-CCO46_RS04245;Name=CCO46_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04245;old_locus_tag=CCO46_04240 NZ_NPOH01000002.1 Protein Homology CDS 301666 303024 . - 0 ID=cds-WP_097363243.1;Parent=gene-CCO46_RS04245;Dbxref=GenBank:WP_097363243.1;Name=WP_097363243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=CCO46_RS04245;product=maltoporin;protein_id=WP_097363243.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 303113 304222 . - . ID=gene-CCO46_RS04250;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=CCO46_RS04250;old_locus_tag=CCO46_04245 NZ_NPOH01000002.1 Protein Homology CDS 303113 304222 . - 0 ID=cds-WP_000179176.1;Parent=gene-CCO46_RS04250;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=CCO46_RS04250;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 304584 305774 . + . ID=gene-CCO46_RS04255;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=CCO46_RS04255;old_locus_tag=CCO46_04250 NZ_NPOH01000002.1 Protein Homology CDS 304584 305774 . + 0 ID=cds-WP_000695415.1;Parent=gene-CCO46_RS04255;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=CCO46_RS04255;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 305723 305863 . - . ID=gene-CCO46_RS25815;Name=CCO46_RS25815;end_range=305863,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25815;partial=true;pseudo=true NZ_NPOH01000002.1 Protein Homology CDS 305723 305863 . - 0 ID=cds-CCO46_RS25815;Parent=gene-CCO46_RS25815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=305863,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO46_RS25815;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 305906 307450 . + . ID=gene-CCO46_RS04260;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=CCO46_RS04260;old_locus_tag=CCO46_04255 NZ_NPOH01000002.1 Protein Homology CDS 305906 307450 . + 0 ID=cds-WP_061372217.1;Parent=gene-CCO46_RS04260;Dbxref=GenBank:WP_061372217.1;Name=WP_061372217.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=CCO46_RS04260;product=maltose ABC transporter permease MalF;protein_id=WP_061372217.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 307465 308355 . + . ID=gene-CCO46_RS04265;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=CCO46_RS04265;old_locus_tag=CCO46_04260 NZ_NPOH01000002.1 Protein Homology CDS 307465 308355 . + 0 ID=cds-WP_001252085.1;Parent=gene-CCO46_RS04265;Dbxref=GenBank:WP_001252085.1;Name=WP_001252085.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=CCO46_RS04265;product=maltose ABC transporter permease MalG;protein_id=WP_001252085.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 308521 308931 . - . ID=gene-CCO46_RS04270;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=CCO46_RS04270;old_locus_tag=CCO46_04265 NZ_NPOH01000002.1 Protein Homology CDS 308521 308931 . - 0 ID=cds-WP_000982749.1;Parent=gene-CCO46_RS04270;Dbxref=GenBank:WP_000982749.1;Name=WP_000982749.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=CCO46_RS04270;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982749.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 309075 311171 . - . ID=gene-CCO46_RS04275;Name=CCO46_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04275;old_locus_tag=CCO46_04270 NZ_NPOH01000002.1 Protein Homology CDS 309075 311171 . - 0 ID=cds-WP_061372219.1;Parent=gene-CCO46_RS04275;Dbxref=GenBank:WP_061372219.1;Name=WP_061372219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=CCO46_RS04275;product=YjbH domain-containing protein;protein_id=WP_061372219.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 311171 311908 . - . ID=gene-CCO46_RS04280;Name=CCO46_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04280;old_locus_tag=CCO46_04275 NZ_NPOH01000002.1 Protein Homology CDS 311171 311908 . - 0 ID=cds-WP_094887827.1;Parent=gene-CCO46_RS04280;Dbxref=GenBank:WP_094887827.1;Name=WP_094887827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=CCO46_RS04280;product=capsule biosynthesis GfcC family protein;protein_id=WP_094887827.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 311905 312543 . - . ID=gene-CCO46_RS04285;Name=CCO46_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04285;old_locus_tag=CCO46_04280 NZ_NPOH01000002.1 Protein Homology CDS 311905 312543 . - 0 ID=cds-WP_000824801.1;Parent=gene-CCO46_RS04285;Dbxref=GenBank:WP_000824801.1;Name=WP_000824801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=CCO46_RS04285;product=YjbF family lipoprotein;protein_id=WP_000824801.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 312607 312849 . - . ID=gene-CCO46_RS04290;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=CCO46_RS04290;old_locus_tag=CCO46_04285 NZ_NPOH01000002.1 Protein Homology CDS 312607 312849 . - 0 ID=cds-WP_001541297.1;Parent=gene-CCO46_RS04290;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=CCO46_RS04290;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 313293 314942 . - . ID=gene-CCO46_RS04295;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=CCO46_RS04295;old_locus_tag=CCO46_04290 NZ_NPOH01000002.1 Protein Homology CDS 313293 314942 . - 0 ID=cds-WP_000790040.1;Parent=gene-CCO46_RS04295;Dbxref=GenBank:WP_000790040.1;Name=WP_000790040.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=CCO46_RS04295;product=glucose-6-phosphate isomerase;protein_id=WP_000790040.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 315330 316679 . + . ID=gene-CCO46_RS04300;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO46_RS04300;old_locus_tag=CCO46_04295 NZ_NPOH01000002.1 Protein Homology CDS 315330 316679 . + 0 ID=cds-WP_000136392.1;Parent=gene-CCO46_RS04300;Dbxref=GenBank:WP_000136392.1;Name=WP_000136392.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=CCO46_RS04300;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136392.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 316810 317157 . - . ID=gene-CCO46_RS04305;Name=CCO46_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04305;old_locus_tag=CCO46_04300 NZ_NPOH01000002.1 Protein Homology CDS 316810 317157 . - 0 ID=cds-WP_000615248.1;Parent=gene-CCO46_RS04305;Dbxref=GenBank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=CCO46_RS04305;product=Mor transcription activator family protein;protein_id=WP_000615248.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 317734 318021 . + . ID=gene-CCO46_RS04310;Name=CCO46_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04310;old_locus_tag=CCO46_04305 NZ_NPOH01000002.1 Protein Homology CDS 317734 318021 . + 0 ID=cds-WP_001226439.1;Parent=gene-CCO46_RS04310;Dbxref=GenBank:WP_001226439.1;Name=WP_001226439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=CCO46_RS04310;product=putative holin;protein_id=WP_001226439.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 318024 318629 . + . ID=gene-CCO46_RS04315;Name=CCO46_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04315;old_locus_tag=CCO46_04310 NZ_NPOH01000002.1 Protein Homology CDS 318024 318629 . + 0 ID=cds-WP_023201674.1;Parent=gene-CCO46_RS04315;Dbxref=GenBank:WP_023201674.1;Name=WP_023201674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=CCO46_RS04315;product=lytic transglycosylase domain-containing protein;protein_id=WP_023201674.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 318642 318956 . + . ID=gene-CCO46_RS04320;Name=CCO46_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04320;old_locus_tag=CCO46_04315 NZ_NPOH01000002.1 Protein Homology CDS 318642 318956 . + 0 ID=cds-WP_000777269.1;Parent=gene-CCO46_RS04320;Dbxref=GenBank:WP_000777269.1;Name=WP_000777269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000777269.1;locus_tag=CCO46_RS04320;product=hypothetical protein;protein_id=WP_000777269.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 319115 319570 . + . ID=gene-CCO46_RS04325;Name=CCO46_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04325;old_locus_tag=CCO46_04320 NZ_NPOH01000002.1 Protein Homology CDS 319115 319570 . + 0 ID=cds-WP_023201675.1;Parent=gene-CCO46_RS04325;Dbxref=GenBank:WP_023201675.1;Name=WP_023201675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=CCO46_RS04325;product=Gp37 family protein;protein_id=WP_023201675.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 319567 319764 . + . ID=gene-CCO46_RS04330;Name=CCO46_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04330;old_locus_tag=CCO46_04325 NZ_NPOH01000002.1 Protein Homology CDS 319567 319764 . + 0 ID=cds-WP_023201676.1;Parent=gene-CCO46_RS04330;Dbxref=GenBank:WP_023201676.1;Name=WP_023201676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=CCO46_RS04330;product=hypothetical protein;protein_id=WP_023201676.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 319754 321181 . + . ID=gene-CCO46_RS04335;Name=CCO46_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04335;old_locus_tag=CCO46_04330 NZ_NPOH01000002.1 Protein Homology CDS 319754 321181 . + 0 ID=cds-WP_023201677.1;Parent=gene-CCO46_RS04335;Dbxref=GenBank:WP_023201677.1;Name=WP_023201677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463078.1;locus_tag=CCO46_RS04335;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_023201677.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 321181 321705 . + . ID=gene-CCO46_RS04340;Name=CCO46_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04340;old_locus_tag=CCO46_04335 NZ_NPOH01000002.1 Protein Homology CDS 321181 321705 . + 0 ID=cds-WP_000907494.1;Parent=gene-CCO46_RS04340;Dbxref=GenBank:WP_000907494.1;Name=WP_000907494.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=CCO46_RS04340;product=phage major tail tube protein;protein_id=WP_000907494.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 321757 322074 . + . ID=gene-CCO46_RS04345;Name=CCO46_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04345;old_locus_tag=CCO46_04340 NZ_NPOH01000002.1 Protein Homology CDS 321757 322074 . + 0 ID=cds-WP_023201678.1;Parent=gene-CCO46_RS04345;Dbxref=GenBank:WP_023201678.1;Name=WP_023201678.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=CCO46_RS04345;product=phage tail assembly protein;protein_id=WP_023201678.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 322034 322162 . + . ID=gene-CCO46_RS04350;Name=CCO46_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04350;old_locus_tag=CCO46_04345 NZ_NPOH01000002.1 Protein Homology CDS 322034 322162 . + 0 ID=cds-WP_001185654.1;Parent=gene-CCO46_RS04350;Dbxref=GenBank:WP_001185654.1;Name=WP_001185654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=CCO46_RS04350;product=GpE family phage tail protein;protein_id=WP_001185654.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 322256 324622 . + . ID=gene-CCO46_RS04355;Name=CCO46_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04355;old_locus_tag=CCO46_04350 NZ_NPOH01000002.1 Protein Homology CDS 322256 324622 . + 0 ID=cds-WP_094887826.1;Parent=gene-CCO46_RS04355;Dbxref=GenBank:WP_094887826.1;Name=WP_094887826.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=CCO46_RS04355;product=phage tail tape measure protein;protein_id=WP_094887826.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 324622 325575 . + . ID=gene-CCO46_RS04360;Name=CCO46_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04360;old_locus_tag=CCO46_04355 NZ_NPOH01000002.1 Protein Homology CDS 324622 325575 . + 0 ID=cds-WP_023201680.1;Parent=gene-CCO46_RS04360;Dbxref=GenBank:WP_023201680.1;Name=WP_023201680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=CCO46_RS04360;product=phage tail protein;protein_id=WP_023201680.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 325575 325784 . + . ID=gene-CCO46_RS04365;Name=CCO46_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04365;old_locus_tag=CCO46_04360 NZ_NPOH01000002.1 Protein Homology CDS 325575 325784 . + 0 ID=cds-WP_023201681.1;Parent=gene-CCO46_RS04365;Dbxref=GenBank:WP_023201681.1;Name=WP_023201681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=CCO46_RS04365;product=tail protein X;protein_id=WP_023201681.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 325772 326815 . + . ID=gene-CCO46_RS04370;Name=CCO46_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04370;old_locus_tag=CCO46_04365 NZ_NPOH01000002.1 Protein Homology CDS 325772 326815 . + 0 ID=cds-WP_023201682.1;Parent=gene-CCO46_RS04370;Dbxref=GenBank:WP_023201682.1;Name=WP_023201682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=CCO46_RS04370;product=phage late control D family protein;protein_id=WP_023201682.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 326825 327547 . + . ID=gene-CCO46_RS04375;Name=CCO46_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04375;old_locus_tag=CCO46_04370 NZ_NPOH01000002.1 Protein Homology CDS 326825 327547 . + 0 ID=cds-WP_079899284.1;Parent=gene-CCO46_RS04375;Dbxref=GenBank:WP_079899284.1;Name=WP_079899284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=CCO46_RS04375;product=phage baseplate assembly protein V;protein_id=WP_079899284.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 327646 328005 . + . ID=gene-CCO46_RS04380;Name=CCO46_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04380;old_locus_tag=CCO46_04375 NZ_NPOH01000002.1 Protein Homology CDS 327646 328005 . + 0 ID=cds-WP_001093501.1;Parent=gene-CCO46_RS04380;Dbxref=GenBank:WP_001093501.1;Name=WP_001093501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=CCO46_RS04380;product=GPW/gp25 family protein;protein_id=WP_001093501.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 327996 329111 . + . ID=gene-CCO46_RS04385;Name=CCO46_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04385;old_locus_tag=CCO46_04380 NZ_NPOH01000002.1 Protein Homology CDS 327996 329111 . + 0 ID=cds-WP_023138096.1;Parent=gene-CCO46_RS04385;Dbxref=GenBank:WP_023138096.1;Name=WP_023138096.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=CCO46_RS04385;product=baseplate assembly protein;protein_id=WP_023138096.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 329104 329736 . + . ID=gene-CCO46_RS04390;Name=CCO46_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04390;old_locus_tag=CCO46_04385 NZ_NPOH01000002.1 Protein Homology CDS 329104 329736 . + 0 ID=cds-WP_023201684.1;Parent=gene-CCO46_RS04390;Dbxref=GenBank:WP_023201684.1;Name=WP_023201684.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=CCO46_RS04390;product=phage tail protein I;protein_id=WP_023201684.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 329739 331346 . + . ID=gene-CCO46_RS04395;Name=CCO46_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04395;old_locus_tag=CCO46_04390 NZ_NPOH01000002.1 Protein Homology CDS 329739 331346 . + 0 ID=cds-WP_097363244.1;Parent=gene-CCO46_RS04395;Dbxref=GenBank:WP_097363244.1;Name=WP_097363244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463065.1;locus_tag=CCO46_RS04395;product=phage tail protein;protein_id=WP_097363244.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 331353 331967 . + . ID=gene-CCO46_RS04400;Name=CCO46_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04400;old_locus_tag=CCO46_04395 NZ_NPOH01000002.1 Protein Homology CDS 331353 331967 . + 0 ID=cds-WP_023201685.1;Parent=gene-CCO46_RS04400;Dbxref=GenBank:WP_023201685.1;Name=WP_023201685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151757.1;locus_tag=CCO46_RS04400;product=DUF4376 domain-containing protein;protein_id=WP_023201685.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 331964 332419 . + . ID=gene-CCO46_RS04405;Name=CCO46_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04405;old_locus_tag=CCO46_04400 NZ_NPOH01000002.1 Protein Homology CDS 331964 332419 . + 0 ID=cds-WP_023201686.1;Parent=gene-CCO46_RS04405;Dbxref=GenBank:WP_023201686.1;Name=WP_023201686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=CCO46_RS04405;product=hypothetical protein;protein_id=WP_023201686.1;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 332671 332961 . + . ID=gene-CCO46_RS04410;Name=CCO46_RS04410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS04410;old_locus_tag=CCO46_04405;pseudo=true NZ_NPOH01000002.1 Protein Homology CDS 332671 332961 . + 0 ID=cds-CCO46_RS04410;Parent=gene-CCO46_RS04410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=CCO46_RS04410;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000002.1 RefSeq pseudogene 333158 333885 . + . ID=gene-CCO46_RS04415;Name=CCO46_RS04415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS04415;old_locus_tag=CCO46_04410;pseudo=true NZ_NPOH01000002.1 Protein Homology CDS 333158 333885 . + 0 ID=cds-CCO46_RS04415;Parent=gene-CCO46_RS04415;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=CCO46_RS04415;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 334147 335088 . + . ID=gene-CCO46_RS04420;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=CCO46_RS04420;old_locus_tag=CCO46_04415 NZ_NPOH01000002.1 Protein Homology CDS 334147 335088 . + 0 ID=cds-WP_000881647.1;Parent=gene-CCO46_RS04420;Dbxref=GenBank:WP_000881647.1;Name=WP_000881647.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=CCO46_RS04420;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_000881647.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 335334 335606 . + . ID=gene-CCO46_RS04430;Name=CCO46_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04430;old_locus_tag=CCO46_04425 NZ_NPOH01000002.1 Protein Homology CDS 335334 335606 . + 0 ID=cds-WP_001534518.1;Parent=gene-CCO46_RS04430;Dbxref=GenBank:WP_001534518.1;Name=WP_001534518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=CCO46_RS04430;product=DUF3811 domain-containing protein;protein_id=WP_001534518.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 335603 336472 . - . ID=gene-CCO46_RS04435;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=CCO46_RS04435;old_locus_tag=CCO46_04430 NZ_NPOH01000002.1 Protein Homology CDS 335603 336472 . - 0 ID=cds-WP_000954606.1;Parent=gene-CCO46_RS04435;Dbxref=GenBank:WP_000954606.1;Name=WP_000954606.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=CCO46_RS04435;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954606.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 336519 337058 . - . ID=gene-CCO46_RS04440;Name=CCO46_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04440;old_locus_tag=CCO46_04435 NZ_NPOH01000002.1 Protein Homology CDS 336519 337058 . - 0 ID=cds-WP_001096724.1;Parent=gene-CCO46_RS04440;Dbxref=GenBank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=CCO46_RS04440;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 337093 337194 . - . ID=gene-CCO46_RS04445;Name=CCO46_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04445;old_locus_tag=CCO46_04440 NZ_NPOH01000002.1 Protein Homology CDS 337093 337194 . - 0 ID=cds-WP_001541281.1;Parent=gene-CCO46_RS04445;Dbxref=GenBank:WP_001541281.1;Name=WP_001541281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=CCO46_RS04445;product=hypothetical protein;protein_id=WP_001541281.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 337266 337955 . + . ID=gene-CCO46_RS04450;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=CCO46_RS04450;old_locus_tag=CCO46_04445 NZ_NPOH01000002.1 Protein Homology CDS 337266 337955 . + 0 ID=cds-WP_000421776.1;Parent=gene-CCO46_RS04450;Dbxref=GenBank:WP_000421776.1;Name=WP_000421776.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=CCO46_RS04450;product=dipeptidase PepE;protein_id=WP_000421776.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 338030 339661 . - . ID=gene-CCO46_RS04455;Name=CCO46_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04455;old_locus_tag=CCO46_04450 NZ_NPOH01000002.1 Protein Homology CDS 338030 339661 . - 0 ID=cds-WP_000956811.1;Parent=gene-CCO46_RS04455;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=CCO46_RS04455;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 339928 343611 . - . ID=gene-CCO46_RS04460;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=CCO46_RS04460;old_locus_tag=CCO46_04455 NZ_NPOH01000002.1 Protein Homology CDS 339928 343611 . - 0 ID=cds-WP_080160474.1;Parent=gene-CCO46_RS04460;Dbxref=GenBank:WP_080160474.1;Name=WP_080160474.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=CCO46_RS04460;product=methionine synthase;protein_id=WP_080160474.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 343916 344740 . + . ID=gene-CCO46_RS04465;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=CCO46_RS04465;old_locus_tag=CCO46_04460 NZ_NPOH01000002.1 Protein Homology CDS 343916 344740 . + 0 ID=cds-WP_000226434.1;Parent=gene-CCO46_RS04465;Dbxref=GenBank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=CCO46_RS04465;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 344751 345158 . + . ID=gene-CCO46_RS04470;Name=CCO46_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04470;old_locus_tag=CCO46_04465 NZ_NPOH01000002.1 Protein Homology CDS 344751 345158 . + 0 ID=cds-WP_010989091.1;Parent=gene-CCO46_RS04470;Dbxref=GenBank:WP_010989091.1;Name=WP_010989091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=CCO46_RS04470;product=ASCH domain-containing protein;protein_id=WP_010989091.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 345122 346873 . - . ID=gene-CCO46_RS04475;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=CCO46_RS04475;old_locus_tag=CCO46_04470 NZ_NPOH01000002.1 Protein Homology CDS 345122 346873 . - 0 ID=cds-WP_001137268.1;Parent=gene-CCO46_RS04475;Dbxref=GenBank:WP_001137268.1;Name=WP_001137268.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=CCO46_RS04475;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137268.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 346975 348279 . - . ID=gene-CCO46_RS04480;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=CCO46_RS04480;old_locus_tag=CCO46_04475 NZ_NPOH01000002.1 Protein Homology CDS 346975 348279 . - 0 ID=cds-WP_097363245.1;Parent=gene-CCO46_RS04480;Dbxref=GenBank:WP_097363245.1;Name=WP_097363245.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=CCO46_RS04480;product=isocitrate lyase;protein_id=WP_097363245.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 348311 349912 . - . ID=gene-CCO46_RS04485;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=CCO46_RS04485;old_locus_tag=CCO46_04480 NZ_NPOH01000002.1 Protein Homology CDS 348311 349912 . - 0 ID=cds-WP_001069371.1;Parent=gene-CCO46_RS04485;Dbxref=GenBank:WP_001069371.1;Name=WP_001069371.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=CCO46_RS04485;product=malate synthase A;protein_id=WP_001069371.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 350181 351110 . - . ID=gene-CCO46_RS04490;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=CCO46_RS04490;old_locus_tag=CCO46_04485 NZ_NPOH01000002.1 Protein Homology CDS 350181 351110 . - 0 ID=cds-WP_001122764.1;Parent=gene-CCO46_RS04490;Dbxref=GenBank:WP_001122764.1;Name=WP_001122764.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=CCO46_RS04490;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122764.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 351267 351704 . + . ID=gene-CCO46_RS04495;Name=CCO46_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04495;old_locus_tag=CCO46_04490 NZ_NPOH01000002.1 Protein Homology CDS 351267 351704 . + 0 ID=cds-WP_000973248.1;Parent=gene-CCO46_RS04495;Dbxref=GenBank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=CCO46_RS04495;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11 NZ_NPOH01000002.1 RefSeq gene 351999 352114 . - . ID=gene-CCO46_RS04500;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO46_RS04500;old_locus_tag=CCO46_04495 NZ_NPOH01000002.1 cmsearch rRNA 351999 352114 . - . ID=rna-CCO46_RS04500;Parent=gene-CCO46_RS04500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS04500;product=5S ribosomal RNA NZ_NPOH01000002.1 cmsearch exon 351999 352114 . - . ID=exon-CCO46_RS04500-1;Parent=rna-CCO46_RS04500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS04500;product=5S ribosomal RNA ##sequence-region NZ_NPOH01000020.1 1 97132 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000020.1 RefSeq region 1 97132 . + . ID=NZ_NPOH01000020.1:1..97132;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000020.1 RefSeq gene 1 727 . + . ID=gene-CCO46_RS20015;Name=CCO46_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20015;old_locus_tag=CCO46_20000;partial=true;start_range=.,1 NZ_NPOH01000020.1 Protein Homology CDS 1 727 . + 1 ID=cds-WP_140436931.1;Parent=gene-CCO46_RS20015;Dbxref=GenBank:WP_140436931.1;Name=WP_140436931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462261.1;locus_tag=CCO46_RS20015;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_140436931.1;start_range=.,1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 747 1478 . + . ID=gene-CCO46_RS20020;Name=CCO46_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20020;old_locus_tag=CCO46_20005 NZ_NPOH01000020.1 Protein Homology CDS 747 1478 . + 0 ID=cds-WP_162920337.1;Parent=gene-CCO46_RS20020;Dbxref=GenBank:WP_162920337.1;Name=WP_162920337.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=CCO46_RS20020;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_162920337.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 1512 2582 . - . ID=gene-CCO46_RS20025;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=CCO46_RS20025;old_locus_tag=CCO46_20010 NZ_NPOH01000020.1 Protein Homology CDS 1512 2582 . - 0 ID=cds-WP_097363466.1;Parent=gene-CCO46_RS20025;Dbxref=GenBank:WP_097363466.1;Name=WP_097363466.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=CCO46_RS20025;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_097363466.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 2675 4042 . - . ID=gene-CCO46_RS20030;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=CCO46_RS20030;old_locus_tag=CCO46_20015 NZ_NPOH01000020.1 Protein Homology CDS 2675 4042 . - 0 ID=cds-WP_000716690.1;Parent=gene-CCO46_RS20030;Dbxref=GenBank:WP_000716690.1;Name=WP_000716690.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=CCO46_RS20030;product=serine endoprotease DegQ;protein_id=WP_000716690.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 4199 4597 . - . ID=gene-CCO46_RS20035;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=CCO46_RS20035;old_locus_tag=CCO46_20020 NZ_NPOH01000020.1 Protein Homology CDS 4199 4597 . - 0 ID=cds-WP_001519074.1;Parent=gene-CCO46_RS20035;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=CCO46_RS20035;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 4790 5914 . + . ID=gene-CCO46_RS20040;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=CCO46_RS20040;old_locus_tag=CCO46_20025 NZ_NPOH01000020.1 Protein Homology CDS 4790 5914 . + 0 ID=cds-WP_097363467.1;Parent=gene-CCO46_RS20040;Dbxref=GenBank:WP_097363467.1;Name=WP_097363467.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=CCO46_RS20040;product=cell division protein ZapE;protein_id=WP_097363467.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 6216 6644 . + . ID=gene-CCO46_RS20045;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CCO46_RS20045;old_locus_tag=CCO46_20030 NZ_NPOH01000020.1 Protein Homology CDS 6216 6644 . + 0 ID=cds-WP_000847559.1;Parent=gene-CCO46_RS20045;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=CCO46_RS20045;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 6660 7052 . + . ID=gene-CCO46_RS20050;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CCO46_RS20050;old_locus_tag=CCO46_20035 NZ_NPOH01000020.1 Protein Homology CDS 6660 7052 . + 0 ID=cds-WP_000829815.1;Parent=gene-CCO46_RS20050;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=CCO46_RS20050;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 7252 8004 . + . ID=gene-CCO46_RS20055;Name=CCO46_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20055;old_locus_tag=CCO46_20040 NZ_NPOH01000020.1 Protein Homology CDS 7252 8004 . + 0 ID=cds-WP_000950539.1;Parent=gene-CCO46_RS20055;Dbxref=GenBank:WP_000950539.1;Name=WP_000950539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=CCO46_RS20055;product=DUF695 domain-containing protein;protein_id=WP_000950539.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 8267 8905 . + . ID=gene-CCO46_RS20060;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=CCO46_RS20060;old_locus_tag=CCO46_20045 NZ_NPOH01000020.1 Protein Homology CDS 8267 8905 . + 0 ID=cds-WP_000257298.1;Parent=gene-CCO46_RS20060;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=CCO46_RS20060;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 8911 9411 . + . ID=gene-CCO46_RS20065;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=CCO46_RS20065;old_locus_tag=CCO46_20050 NZ_NPOH01000020.1 Protein Homology CDS 8911 9411 . + 0 ID=cds-WP_000366112.1;Parent=gene-CCO46_RS20065;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=CCO46_RS20065;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 9520 10311 . + . ID=gene-CCO46_RS20070;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=CCO46_RS20070;old_locus_tag=CCO46_20055 NZ_NPOH01000020.1 Protein Homology CDS 9520 10311 . + 0 ID=cds-WP_000382926.1;Parent=gene-CCO46_RS20070;Dbxref=GenBank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=CCO46_RS20070;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 10446 11339 . + . ID=gene-CCO46_RS20075;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=CCO46_RS20075;old_locus_tag=CCO46_20060 NZ_NPOH01000020.1 Protein Homology CDS 10446 11339 . + 0 ID=cds-WP_001029665.1;Parent=gene-CCO46_RS20075;Dbxref=GenBank:WP_001029665.1;Name=WP_001029665.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=CCO46_RS20075;product=N-acetylneuraminate lyase;protein_id=WP_001029665.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 11455 12945 . + . ID=gene-CCO46_RS20080;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=CCO46_RS20080;old_locus_tag=CCO46_20065 NZ_NPOH01000020.1 Protein Homology CDS 11455 12945 . + 0 ID=cds-WP_000108071.1;Parent=gene-CCO46_RS20080;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=CCO46_RS20080;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 12992 13681 . + . ID=gene-CCO46_RS20085;Name=CCO46_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20085;old_locus_tag=CCO46_20070 NZ_NPOH01000020.1 Protein Homology CDS 12992 13681 . + 0 ID=cds-WP_000054444.1;Parent=gene-CCO46_RS20085;Dbxref=GenBank:WP_000054444.1;Name=WP_000054444.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=CCO46_RS20085;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054444.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 13678 14553 . + . ID=gene-CCO46_RS20090;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=CCO46_RS20090;old_locus_tag=CCO46_20075 NZ_NPOH01000020.1 Protein Homology CDS 13678 14553 . + 0 ID=cds-WP_000208982.1;Parent=gene-CCO46_RS20090;Dbxref=GenBank:WP_000208982.1;Name=WP_000208982.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=CCO46_RS20090;product=N-acetylmannosamine kinase;protein_id=WP_000208982.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 14550 15017 . + . ID=gene-CCO46_RS20095;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=CCO46_RS20095;old_locus_tag=CCO46_20080 NZ_NPOH01000020.1 Protein Homology CDS 14550 15017 . + 0 ID=cds-WP_058331954.1;Parent=gene-CCO46_RS20095;Dbxref=GenBank:WP_058331954.1;Name=WP_058331954.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=CCO46_RS20095;product=N-acetylneuraminate anomerase;protein_id=WP_058331954.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 15100 16380 . - . ID=gene-CCO46_RS20100;Name=CCO46_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20100;old_locus_tag=CCO46_20085 NZ_NPOH01000020.1 Protein Homology CDS 15100 16380 . - 0 ID=cds-WP_001180680.1;Parent=gene-CCO46_RS20100;Dbxref=GenBank:WP_001180680.1;Name=WP_001180680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=CCO46_RS20100;product=cytosine deaminase;protein_id=WP_001180680.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 16367 17620 . - . ID=gene-CCO46_RS20105;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=CCO46_RS20105;old_locus_tag=CCO46_20090 NZ_NPOH01000020.1 Protein Homology CDS 16367 17620 . - 0 ID=cds-WP_000076263.1;Parent=gene-CCO46_RS20105;Dbxref=GenBank:WP_000076263.1;Name=WP_000076263.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=CCO46_RS20105;product=cytosine permease;protein_id=WP_000076263.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 17736 18839 . - . ID=gene-CCO46_RS20110;Name=CCO46_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20110;old_locus_tag=CCO46_20095 NZ_NPOH01000020.1 Protein Homology CDS 17736 18839 . - 0 ID=cds-WP_000184305.1;Parent=gene-CCO46_RS20110;Dbxref=GenBank:WP_000184305.1;Name=WP_000184305.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=CCO46_RS20110;product=PDDEXK nuclease domain-containing protein;protein_id=WP_000184305.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 19047 20465 . - . ID=gene-CCO46_RS20115;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=CCO46_RS20115;old_locus_tag=CCO46_20100 NZ_NPOH01000020.1 Protein Homology CDS 19047 20465 . - 0 ID=cds-WP_000081642.1;Parent=gene-CCO46_RS20115;Dbxref=GenBank:WP_000081642.1;Name=WP_000081642.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=CCO46_RS20115;product=glutamate synthase subunit GltD;protein_id=WP_000081642.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 20475 24935 . - . ID=gene-CCO46_RS20120;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CCO46_RS20120;old_locus_tag=CCO46_20105 NZ_NPOH01000020.1 Protein Homology CDS 20475 24935 . - 0 ID=cds-WP_001748595.1;Parent=gene-CCO46_RS20120;Dbxref=GenBank:WP_001748595.1;Name=WP_001748595.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=CCO46_RS20120;product=glutamate synthase large subunit;protein_id=WP_001748595.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 25607 26536 . + . ID=gene-CCO46_RS20130;Name=CCO46_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20130;old_locus_tag=CCO46_20115 NZ_NPOH01000020.1 Protein Homology CDS 25607 26536 . + 0 ID=cds-WP_058331952.1;Parent=gene-CCO46_RS20130;Dbxref=GenBank:WP_058331952.1;Name=WP_058331952.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=CCO46_RS20130;product=TIGR01212 family radical SAM protein;protein_id=WP_058331952.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 26630 28966 . + . ID=gene-CCO46_RS20135;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=CCO46_RS20135;old_locus_tag=CCO46_20120 NZ_NPOH01000020.1 Protein Homology CDS 26630 28966 . + 0 ID=cds-WP_000809820.1;Parent=gene-CCO46_RS20135;Dbxref=GenBank:WP_000809820.1;Name=WP_000809820.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=CCO46_RS20135;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809820.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 29193 29846 . + . ID=gene-CCO46_RS20140;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=CCO46_RS20140;old_locus_tag=CCO46_20125 NZ_NPOH01000020.1 Protein Homology CDS 29193 29846 . + 0 ID=cds-WP_000719822.1;Parent=gene-CCO46_RS20140;Dbxref=GenBank:WP_000719822.1;Name=WP_000719822.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=CCO46_RS20140;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719822.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 29843 30571 . + . ID=gene-CCO46_RS20145;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=CCO46_RS20145;old_locus_tag=CCO46_20130 NZ_NPOH01000020.1 Protein Homology CDS 29843 30571 . + 0 ID=cds-WP_000044647.1;Parent=gene-CCO46_RS20145;Dbxref=GenBank:WP_000044647.1;Name=WP_000044647.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=CCO46_RS20145;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044647.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 30646 31278 . - . ID=gene-CCO46_RS20150;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=CCO46_RS20150;old_locus_tag=CCO46_20135 NZ_NPOH01000020.1 Protein Homology CDS 30646 31278 . - 0 ID=cds-WP_000602196.1;Parent=gene-CCO46_RS20150;Dbxref=GenBank:WP_000602196.1;Name=WP_000602196.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=CCO46_RS20150;product=PhoP regulatory network protein YrbL;protein_id=WP_000602196.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 31528 31800 . - . ID=gene-CCO46_RS20160;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=CCO46_RS20160;old_locus_tag=CCO46_20145 NZ_NPOH01000020.1 Protein Homology CDS 31528 31800 . - 0 ID=cds-WP_000216797.1;Parent=gene-CCO46_RS20160;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=CCO46_RS20160;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 31797 32651 . - . ID=gene-CCO46_RS20165;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CCO46_RS20165;old_locus_tag=CCO46_20150 NZ_NPOH01000020.1 Protein Homology CDS 31797 32651 . - 0 ID=cds-WP_000243749.1;Parent=gene-CCO46_RS20165;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=CCO46_RS20165;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 32697 33188 . - . ID=gene-CCO46_RS20170;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=CCO46_RS20170;old_locus_tag=CCO46_20155 NZ_NPOH01000020.1 Protein Homology CDS 32697 33188 . - 0 ID=cds-WP_000609332.1;Parent=gene-CCO46_RS20170;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=CCO46_RS20170;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 33306 33593 . - . ID=gene-CCO46_RS20175;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CCO46_RS20175;old_locus_tag=CCO46_20160 NZ_NPOH01000020.1 Protein Homology CDS 33306 33593 . - 0 ID=cds-WP_001176589.1;Parent=gene-CCO46_RS20175;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=CCO46_RS20175;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 33616 35049 . - . ID=gene-CCO46_RS20180;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=CCO46_RS20180;old_locus_tag=CCO46_20165 NZ_NPOH01000020.1 Protein Homology CDS 33616 35049 . - 0 ID=cds-WP_000809020.1;Parent=gene-CCO46_RS20180;Dbxref=GenBank:WP_000809020.1;Name=WP_000809020.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=CCO46_RS20180;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 35097 35822 . - . ID=gene-CCO46_RS20185;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=CCO46_RS20185;old_locus_tag=CCO46_20170 NZ_NPOH01000020.1 Protein Homology CDS 35097 35822 . - 0 ID=cds-WP_000224104.1;Parent=gene-CCO46_RS20185;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=CCO46_RS20185;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 35829 36383 . - . ID=gene-CCO46_RS20190;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=CCO46_RS20190;old_locus_tag=CCO46_20175 NZ_NPOH01000020.1 Protein Homology CDS 35829 36383 . - 0 ID=cds-WP_000669770.1;Parent=gene-CCO46_RS20190;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=CCO46_RS20190;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 36352 36927 . - . ID=gene-CCO46_RS20195;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=CCO46_RS20195;old_locus_tag=CCO46_20180 NZ_NPOH01000020.1 Protein Homology CDS 36352 36927 . - 0 ID=cds-WP_000047845.1;Parent=gene-CCO46_RS20195;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=CCO46_RS20195;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 36924 37490 . - . ID=gene-CCO46_RS20200;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=CCO46_RS20200;old_locus_tag=CCO46_20185 NZ_NPOH01000020.1 Protein Homology CDS 36924 37490 . - 0 ID=cds-WP_000030029.1;Parent=gene-CCO46_RS20200;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=CCO46_RS20200;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 37511 38497 . - . ID=gene-CCO46_RS20205;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=CCO46_RS20205;old_locus_tag=CCO46_20190 NZ_NPOH01000020.1 Protein Homology CDS 37511 38497 . - 0 ID=cds-WP_000018619.1;Parent=gene-CCO46_RS20205;Dbxref=GenBank:WP_000018619.1;Name=WP_000018619.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=CCO46_RS20205;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018619.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 38511 39488 . - . ID=gene-CCO46_RS20210;Name=CCO46_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20210;old_locus_tag=CCO46_20195 NZ_NPOH01000020.1 Protein Homology CDS 38511 39488 . - 0 ID=cds-WP_000922736.1;Parent=gene-CCO46_RS20210;Dbxref=GenBank:WP_000922736.1;Name=WP_000922736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=CCO46_RS20210;product=calcium/sodium antiporter;protein_id=WP_000922736.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 39701 40513 . + . ID=gene-CCO46_RS20215;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=CCO46_RS20215;old_locus_tag=CCO46_20200 NZ_NPOH01000020.1 Protein Homology CDS 39701 40513 . + 0 ID=cds-WP_000531566.1;Parent=gene-CCO46_RS20215;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=CCO46_RS20215;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 40521 41303 . + . ID=gene-CCO46_RS20220;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=CCO46_RS20220;old_locus_tag=CCO46_20205 NZ_NPOH01000020.1 Protein Homology CDS 40521 41303 . + 0 ID=cds-WP_000925786.1;Parent=gene-CCO46_RS20220;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=CCO46_RS20220;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 41308 41859 . + . ID=gene-CCO46_RS20225;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=CCO46_RS20225;old_locus_tag=CCO46_20210 NZ_NPOH01000020.1 Protein Homology CDS 41308 41859 . + 0 ID=cds-WP_001193591.1;Parent=gene-CCO46_RS20225;Dbxref=GenBank:WP_001193591.1;Name=WP_001193591.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=CCO46_RS20225;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193591.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 41878 42513 . + . ID=gene-CCO46_RS20230;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=CCO46_RS20230;old_locus_tag=CCO46_20215 NZ_NPOH01000020.1 Protein Homology CDS 41878 42513 . + 0 ID=cds-WP_000476475.1;Parent=gene-CCO46_RS20230;Dbxref=GenBank:WP_000476475.1;Name=WP_000476475.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=CCO46_RS20230;product=phospholipid-binding protein MlaC;protein_id=WP_000476475.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 42513 42809 . + . ID=gene-CCO46_RS20235;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=CCO46_RS20235;old_locus_tag=CCO46_20220 NZ_NPOH01000020.1 Protein Homology CDS 42513 42809 . + 0 ID=cds-WP_000188844.1;Parent=gene-CCO46_RS20235;Dbxref=GenBank:WP_000188844.1;Name=WP_000188844.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=CCO46_RS20235;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188844.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 42997 43251 . + . ID=gene-CCO46_RS20240;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=CCO46_RS20240;old_locus_tag=CCO46_20225 NZ_NPOH01000020.1 Protein Homology CDS 42997 43251 . + 0 ID=cds-WP_001518349.1;Parent=gene-CCO46_RS20240;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=CCO46_RS20240;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 43305 44564 . + . ID=gene-CCO46_RS20245;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CCO46_RS20245;old_locus_tag=CCO46_20230 NZ_NPOH01000020.1 Protein Homology CDS 43305 44564 . + 0 ID=cds-WP_000357288.1;Parent=gene-CCO46_RS20245;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=CCO46_RS20245;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 44622 44909 . - . ID=gene-CCO46_RS20250;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=CCO46_RS20250;old_locus_tag=CCO46_20235 NZ_NPOH01000020.1 Protein Homology CDS 44622 44909 . - 0 ID=cds-WP_000444168.1;Parent=gene-CCO46_RS20250;Dbxref=GenBank:WP_000444168.1;Name=WP_000444168.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=CCO46_RS20250;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444168.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 45141 46112 . - . ID=gene-CCO46_RS20255;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=CCO46_RS20255;old_locus_tag=CCO46_20240 NZ_NPOH01000020.1 Protein Homology CDS 45141 46112 . - 0 ID=cds-WP_097363468.1;Parent=gene-CCO46_RS20255;Dbxref=GenBank:WP_097363468.1;Name=WP_097363468.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=CCO46_RS20255;product=octaprenyl diphosphate synthase;protein_id=WP_097363468.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 46370 46681 . + . ID=gene-CCO46_RS20260;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CCO46_RS20260;old_locus_tag=CCO46_20245 NZ_NPOH01000020.1 Protein Homology CDS 46370 46681 . + 0 ID=cds-WP_000271396.1;Parent=gene-CCO46_RS20260;Dbxref=GenBank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=CCO46_RS20260;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 46701 46958 . + . ID=gene-CCO46_RS20265;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CCO46_RS20265;old_locus_tag=CCO46_20250 NZ_NPOH01000020.1 Protein Homology CDS 46701 46958 . + 0 ID=cds-WP_000940593.1;Parent=gene-CCO46_RS20265;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=CCO46_RS20265;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 47088 48053 . + . ID=gene-CCO46_RS20270;Name=CCO46_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20270;old_locus_tag=CCO46_20255 NZ_NPOH01000020.1 Protein Homology CDS 47088 48053 . + 0 ID=cds-WP_000813052.1;Parent=gene-CCO46_RS20270;Dbxref=GenBank:WP_000813052.1;Name=WP_000813052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=CCO46_RS20270;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 48069 49241 . + . ID=gene-CCO46_RS20275;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=CCO46_RS20275;old_locus_tag=CCO46_20260 NZ_NPOH01000020.1 Protein Homology CDS 48069 49241 . + 0 ID=cds-WP_000673556.1;Parent=gene-CCO46_RS20275;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=CCO46_RS20275;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 49372 50805 . - . ID=gene-CCO46_RS20280;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=CCO46_RS20280;old_locus_tag=CCO46_20265 NZ_NPOH01000020.1 Protein Homology CDS 49372 50805 . - 0 ID=cds-WP_097363469.1;Parent=gene-CCO46_RS20280;Dbxref=GenBank:WP_097363469.1;Name=WP_097363469.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=CCO46_RS20280;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_097363469.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 51053 51529 . + . ID=gene-CCO46_RS20285;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CCO46_RS20285;old_locus_tag=CCO46_20270 NZ_NPOH01000020.1 Protein Homology CDS 51053 51529 . + 0 ID=cds-WP_001148008.1;Parent=gene-CCO46_RS20285;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=CCO46_RS20285;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 51685 51978 . - . ID=gene-CCO46_RS20290;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CCO46_RS20290;old_locus_tag=CCO46_20275 NZ_NPOH01000020.1 Protein Homology CDS 51685 51978 . - 0 ID=cds-WP_001592995.1;Parent=gene-CCO46_RS20290;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=CCO46_RS20290;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 52105 52731 . + . ID=gene-CCO46_RS20295;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=CCO46_RS20295;old_locus_tag=CCO46_20280 NZ_NPOH01000020.1 Protein Homology CDS 52105 52731 . + 0 ID=cds-WP_000145974.1;Parent=gene-CCO46_RS20295;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=CCO46_RS20295;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 52835 54769 . + . ID=gene-CCO46_RS20305;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=CCO46_RS20305;old_locus_tag=CCO46_20290 NZ_NPOH01000020.1 Protein Homology CDS 52835 54769 . + 0 ID=cds-WP_001107481.1;Parent=gene-CCO46_RS20305;Dbxref=GenBank:WP_001107481.1;Name=WP_001107481.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=CCO46_RS20305;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 54873 55721 . + . ID=gene-CCO46_RS20310;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CCO46_RS20310;old_locus_tag=CCO46_20295 NZ_NPOH01000020.1 Protein Homology CDS 54873 55721 . + 0 ID=cds-WP_000764711.1;Parent=gene-CCO46_RS20310;Dbxref=GenBank:WP_000764711.1;Name=WP_000764711.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=CCO46_RS20310;product=dihydropteroate synthase;protein_id=WP_000764711.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 55714 57051 . + . ID=gene-CCO46_RS20315;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CCO46_RS20315;old_locus_tag=CCO46_20300 NZ_NPOH01000020.1 Protein Homology CDS 55714 57051 . + 0 ID=cds-WP_000071169.1;Parent=gene-CCO46_RS20315;Dbxref=GenBank:WP_000071169.1;Name=WP_000071169.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=CCO46_RS20315;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 57274 57606 . + . ID=gene-CCO46_RS20320;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CCO46_RS20320;old_locus_tag=CCO46_20305 NZ_NPOH01000020.1 Protein Homology CDS 57274 57606 . + 0 ID=cds-WP_000272680.1;Parent=gene-CCO46_RS20320;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=CCO46_RS20320;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 57620 57706 . + . ID=gene-CCO46_RS20325;Name=CCO46_RS20325;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS20325;old_locus_tag=CCO46_20310 NZ_NPOH01000020.1 tRNAscan-SE tRNA 57620 57706 . + . ID=rna-CCO46_RS20325;Parent=gene-CCO46_RS20325;anticodon=(pos:57654..57656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS20325;product=tRNA-Leu NZ_NPOH01000020.1 tRNAscan-SE exon 57620 57706 . + . ID=exon-CCO46_RS20325-1;Parent=rna-CCO46_RS20325;anticodon=(pos:57654..57656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS20325;product=tRNA-Leu NZ_NPOH01000020.1 RefSeq gene 57904 59247 . - . ID=gene-CCO46_RS20330;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=CCO46_RS20330;old_locus_tag=CCO46_20315 NZ_NPOH01000020.1 Protein Homology CDS 57904 59247 . - 0 ID=cds-WP_097363470.1;Parent=gene-CCO46_RS20330;Dbxref=GenBank:WP_097363470.1;Name=WP_097363470.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=CCO46_RS20330;product=argininosuccinate synthase;protein_id=WP_097363470.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 59591 59667 . + . ID=gene-CCO46_RS20335;Name=CCO46_RS20335;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS20335;old_locus_tag=CCO46_20320 NZ_NPOH01000020.1 tRNAscan-SE tRNA 59591 59667 . + . ID=rna-CCO46_RS20335;Parent=gene-CCO46_RS20335;anticodon=(pos:59625..59627);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS20335;product=tRNA-Met NZ_NPOH01000020.1 tRNAscan-SE exon 59591 59667 . + . ID=exon-CCO46_RS20335-1;Parent=rna-CCO46_RS20335;anticodon=(pos:59625..59627);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS20335;product=tRNA-Met NZ_NPOH01000020.1 RefSeq gene 59875 60327 . + . ID=gene-CCO46_RS20340;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CCO46_RS20340;old_locus_tag=CCO46_20325 NZ_NPOH01000020.1 Protein Homology CDS 59875 60327 . + 0 ID=cds-WP_000105461.1;Parent=gene-CCO46_RS20340;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=CCO46_RS20340;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 60355 61857 . + . ID=gene-CCO46_RS20345;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CCO46_RS20345;old_locus_tag=CCO46_20330 NZ_NPOH01000020.1 Protein Homology CDS 60355 61857 . + 0 ID=cds-WP_001031038.1;Parent=gene-CCO46_RS20345;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=CCO46_RS20345;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 61882 64560 . + . ID=gene-CCO46_RS20350;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CCO46_RS20350;old_locus_tag=CCO46_20335 NZ_NPOH01000020.1 Protein Homology CDS 61882 64560 . + 0 ID=cds-WP_000133064.1;Parent=gene-CCO46_RS20350;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=CCO46_RS20350;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 64781 65182 . + . ID=gene-CCO46_RS20355;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CCO46_RS20355;old_locus_tag=CCO46_20340 NZ_NPOH01000020.1 Protein Homology CDS 64781 65182 . + 0 ID=cds-WP_001040208.1;Parent=gene-CCO46_RS20355;Dbxref=GenBank:WP_001040208.1;Name=WP_001040208.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=CCO46_RS20355;product=30S ribosome-binding factor RbfA;protein_id=WP_001040208.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 65182 66126 . + . ID=gene-CCO46_RS20360;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CCO46_RS20360;old_locus_tag=CCO46_20345 NZ_NPOH01000020.1 Protein Homology CDS 65182 66126 . + 0 ID=cds-WP_000089678.1;Parent=gene-CCO46_RS20360;Dbxref=GenBank:WP_000089678.1;Name=WP_000089678.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=CCO46_RS20360;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089678.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 66277 66546 . + . ID=gene-CCO46_RS20365;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CCO46_RS20365;old_locus_tag=CCO46_20350 NZ_NPOH01000020.1 Protein Homology CDS 66277 66546 . + 0 ID=cds-WP_000059465.1;Parent=gene-CCO46_RS20365;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=CCO46_RS20365;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 66788 68923 . + . ID=gene-CCO46_RS20370;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CCO46_RS20370;old_locus_tag=CCO46_20355 NZ_NPOH01000020.1 Protein Homology CDS 66788 68923 . + 0 ID=cds-WP_001670767.1;Parent=gene-CCO46_RS20370;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=CCO46_RS20370;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 69033 69917 . + . ID=gene-CCO46_RS20375;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=CCO46_RS20375;old_locus_tag=CCO46_20360 NZ_NPOH01000020.1 Protein Homology CDS 69033 69917 . + 0 ID=cds-WP_000802069.1;Parent=gene-CCO46_RS20375;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=CCO46_RS20375;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 70023 70103 . + . ID=gene-CCO46_RS25015;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=CCO46_RS25015 NZ_NPOH01000020.1 Protein Homology CDS 70023 70103 . + 0 ID=cds-WP_010723222.1;Parent=gene-CCO46_RS25015;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=CCO46_RS25015;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 70096 71985 . + . ID=gene-CCO46_RS20380;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=CCO46_RS20380;old_locus_tag=CCO46_20365 NZ_NPOH01000020.1 Protein Homology CDS 70096 71985 . + 0 ID=cds-WP_000807248.1;Parent=gene-CCO46_RS20380;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=CCO46_RS20380;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 72139 73383 . + . ID=gene-CCO46_RS20385;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=CCO46_RS20385;old_locus_tag=CCO46_20370 NZ_NPOH01000020.1 Protein Homology CDS 72139 73383 . + 0 ID=cds-WP_000224390.1;Parent=gene-CCO46_RS20385;Dbxref=GenBank:WP_000224390.1;Name=WP_000224390.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=CCO46_RS20385;product=tryptophan permease;protein_id=WP_000224390.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 73474 74481 . - . ID=gene-CCO46_RS20390;Name=CCO46_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20390;old_locus_tag=CCO46_20375 NZ_NPOH01000020.1 Protein Homology CDS 73474 74481 . - 0 ID=cds-WP_023181572.1;Parent=gene-CCO46_RS20390;Dbxref=GenBank:WP_023181572.1;Name=WP_023181572.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=CCO46_RS20390;product=luciferase-like monooxygenase;protein_id=WP_023181572.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 74659 75537 . - . ID=gene-CCO46_RS20395;Name=CCO46_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20395;old_locus_tag=CCO46_20380 NZ_NPOH01000020.1 Protein Homology CDS 74659 75537 . - 0 ID=cds-WP_023219242.1;Parent=gene-CCO46_RS20395;Dbxref=GenBank:WP_023219242.1;Name=WP_023219242.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=CCO46_RS20395;product=U32 family peptidase;protein_id=WP_023219242.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 75546 76541 . - . ID=gene-CCO46_RS20400;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=CCO46_RS20400;old_locus_tag=CCO46_20385 NZ_NPOH01000020.1 Protein Homology CDS 75546 76541 . - 0 ID=cds-WP_000421309.1;Parent=gene-CCO46_RS20400;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=CCO46_RS20400;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 76758 77282 . + . ID=gene-CCO46_RS20405;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=CCO46_RS20405;old_locus_tag=CCO46_20390 NZ_NPOH01000020.1 Protein Homology CDS 76758 77282 . + 0 ID=cds-WP_000884721.1;Parent=gene-CCO46_RS20405;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=CCO46_RS20405;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 77276 77779 . + . ID=gene-CCO46_RS20410;Name=CCO46_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20410;old_locus_tag=CCO46_20395 NZ_NPOH01000020.1 Protein Homology CDS 77276 77779 . + 0 ID=cds-WP_097363471.1;Parent=gene-CCO46_RS20410;Dbxref=GenBank:WP_097363471.1;Name=WP_097363471.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=CCO46_RS20410;product=GNAT family N-acetyltransferase;protein_id=WP_097363471.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 77766 78083 . - . ID=gene-CCO46_RS20415;Name=CCO46_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20415;old_locus_tag=CCO46_20400 NZ_NPOH01000020.1 Protein Homology CDS 77766 78083 . - 0 ID=cds-WP_000928379.1;Parent=gene-CCO46_RS20415;Dbxref=GenBank:WP_000928379.1;Name=WP_000928379.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=CCO46_RS20415;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 78121 78564 . + . ID=gene-CCO46_RS20420;Name=CCO46_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20420;old_locus_tag=CCO46_20405 NZ_NPOH01000020.1 Protein Homology CDS 78121 78564 . + 0 ID=cds-WP_001608176.1;Parent=gene-CCO46_RS20420;Dbxref=GenBank:WP_001608176.1;Name=WP_001608176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=CCO46_RS20420;product=YhbP family protein;protein_id=WP_001608176.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 78544 79062 . - . ID=gene-CCO46_RS20425;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=CCO46_RS20425;old_locus_tag=CCO46_20410 NZ_NPOH01000020.1 Protein Homology CDS 78544 79062 . - 0 ID=cds-WP_000037599.1;Parent=gene-CCO46_RS20425;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=CCO46_RS20425;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 79193 79828 . + . ID=gene-CCO46_RS20430;Name=CCO46_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20430;old_locus_tag=CCO46_20415 NZ_NPOH01000020.1 Protein Homology CDS 79193 79828 . + 0 ID=cds-WP_097363472.1;Parent=gene-CCO46_RS20430;Dbxref=GenBank:WP_097363472.1;Name=WP_097363472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=CCO46_RS20430;product=NAD(P)H-binding protein;protein_id=WP_097363472.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 79895 80470 . - . ID=gene-CCO46_RS20435;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=CCO46_RS20435;old_locus_tag=CCO46_20420 NZ_NPOH01000020.1 Protein Homology CDS 79895 80470 . - 0 ID=cds-WP_000643280.1;Parent=gene-CCO46_RS20435;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=CCO46_RS20435;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 80480 81070 . - . ID=gene-CCO46_RS20440;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=CCO46_RS20440;old_locus_tag=CCO46_20425 NZ_NPOH01000020.1 Protein Homology CDS 80480 81070 . - 0 ID=cds-WP_000893481.1;Parent=gene-CCO46_RS20440;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=CCO46_RS20440;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 81092 81487 . - . ID=gene-CCO46_RS20445;Name=CCO46_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20445;old_locus_tag=CCO46_20430 NZ_NPOH01000020.1 Protein Homology CDS 81092 81487 . - 0 ID=cds-WP_000057285.1;Parent=gene-CCO46_RS20445;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=CCO46_RS20445;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 81445 83487 . - . ID=gene-CCO46_RS20450;Name=CCO46_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20450;old_locus_tag=CCO46_20435 NZ_NPOH01000020.1 Protein Homology CDS 81445 83487 . - 0 ID=cds-WP_097363473.1;Parent=gene-CCO46_RS20450;Dbxref=GenBank:WP_097363473.1;Name=WP_097363473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=CCO46_RS20450;product=penicillin-binding protein activator;protein_id=WP_097363473.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 83551 84414 . + . ID=gene-CCO46_RS20455;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CCO46_RS20455;old_locus_tag=CCO46_20440 NZ_NPOH01000020.1 Protein Homology CDS 83551 84414 . + 0 ID=cds-WP_000812295.1;Parent=gene-CCO46_RS20455;Dbxref=GenBank:WP_000812295.1;Name=WP_000812295.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=CCO46_RS20455;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812295.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 84572 85345 . - . ID=gene-CCO46_RS20460;Name=CCO46_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20460;old_locus_tag=CCO46_20445 NZ_NPOH01000020.1 Protein Homology CDS 84572 85345 . - 0 ID=cds-WP_001083898.1;Parent=gene-CCO46_RS20460;Dbxref=GenBank:WP_001083898.1;Name=WP_001083898.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=CCO46_RS20460;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083898.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 85456 86499 . - . ID=gene-CCO46_RS20465;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CCO46_RS20465;old_locus_tag=CCO46_20450 NZ_NPOH01000020.1 Protein Homology CDS 85456 86499 . - 0 ID=cds-WP_000844173.1;Parent=gene-CCO46_RS20465;Dbxref=GenBank:WP_000844173.1;Name=WP_000844173.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=CCO46_RS20465;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844173.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 86543 87916 . - . ID=gene-CCO46_RS20470;Name=CCO46_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20470;old_locus_tag=CCO46_20455 NZ_NPOH01000020.1 Protein Homology CDS 86543 87916 . - 0 ID=cds-WP_000490601.1;Parent=gene-CCO46_RS20470;Dbxref=GenBank:WP_000490601.1;Name=WP_000490601.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=CCO46_RS20470;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490601.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 87920 88204 . - . ID=gene-CCO46_RS20475;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CCO46_RS20475;old_locus_tag=CCO46_20460 NZ_NPOH01000020.1 Protein Homology CDS 87920 88204 . - 0 ID=cds-WP_000824293.1;Parent=gene-CCO46_RS20475;Dbxref=GenBank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=CCO46_RS20475;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 88235 88699 . - . ID=gene-CCO46_RS20480;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CCO46_RS20480;old_locus_tag=CCO46_20465 NZ_NPOH01000020.1 Protein Homology CDS 88235 88699 . - 0 ID=cds-WP_000080445.1;Parent=gene-CCO46_RS20480;Dbxref=GenBank:WP_000080445.1;Name=WP_000080445.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=CCO46_RS20480;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080445.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 88714 89985 . - . ID=gene-CCO46_RS20485;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=CCO46_RS20485;old_locus_tag=CCO46_20470 NZ_NPOH01000020.1 Protein Homology CDS 88714 89985 . - 0 ID=cds-WP_001805535.1;Parent=gene-CCO46_RS20485;Dbxref=GenBank:WP_001805535.1;Name=WP_001805535.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=CCO46_RS20485;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_001805535.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 90105 90959 . - . ID=gene-CCO46_RS20490;Name=CCO46_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20490;old_locus_tag=CCO46_20475 NZ_NPOH01000020.1 Protein Homology CDS 90105 90959 . - 0 ID=cds-WP_000469979.1;Parent=gene-CCO46_RS20490;Dbxref=GenBank:WP_000469979.1;Name=WP_000469979.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=CCO46_RS20490;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469979.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 91217 92788 . - . ID=gene-CCO46_RS20495;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=CCO46_RS20495;old_locus_tag=CCO46_20480 NZ_NPOH01000020.1 Protein Homology CDS 91217 92788 . - 0 ID=cds-WP_001273722.1;Parent=gene-CCO46_RS20495;Dbxref=GenBank:WP_001273722.1;Name=WP_001273722.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=CCO46_RS20495;product=galactarate dehydratase;protein_id=WP_001273722.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 93318 94088 . + . ID=gene-CCO46_RS20500;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=CCO46_RS20500;old_locus_tag=CCO46_20485 NZ_NPOH01000020.1 Protein Homology CDS 93318 94088 . + 0 ID=cds-WP_001057715.1;Parent=gene-CCO46_RS20500;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=CCO46_RS20500;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 94114 95004 . + . ID=gene-CCO46_RS20505;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=CCO46_RS20505;old_locus_tag=CCO46_20490 NZ_NPOH01000020.1 Protein Homology CDS 94114 95004 . + 0 ID=cds-WP_000178106.1;Parent=gene-CCO46_RS20505;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=CCO46_RS20505;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 95102 96247 . + . ID=gene-CCO46_RS20510;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=CCO46_RS20510;old_locus_tag=CCO46_20495 NZ_NPOH01000020.1 Protein Homology CDS 95102 96247 . + 0 ID=cds-WP_000706458.1;Parent=gene-CCO46_RS20510;Dbxref=GenBank:WP_000706458.1;Name=WP_000706458.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=CCO46_RS20510;product=glycerate 2-kinase;protein_id=WP_000706458.1;transl_table=11 NZ_NPOH01000020.1 RefSeq gene 96280 96654 . + . ID=gene-CCO46_RS20515;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CCO46_RS20515;old_locus_tag=CCO46_20500 NZ_NPOH01000020.1 cmsearch RNase_P_RNA 96280 96654 . + . ID=rna-CCO46_RS20515;Parent=gene-CCO46_RS20515;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS20515;product=RNase P RNA component class A NZ_NPOH01000020.1 cmsearch exon 96280 96654 . + . ID=exon-CCO46_RS20515-1;Parent=rna-CCO46_RS20515;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS20515;product=RNase P RNA component class A ##sequence-region NZ_NPOH01000021.1 1 95158 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000021.1 RefSeq region 1 95158 . + . ID=NZ_NPOH01000021.1:1..95158;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000021.1 RefSeq pseudogene 1 725 . - . ID=gene-CCO46_RS20525;Name=CCO46_RS20525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS20525;old_locus_tag=CCO46_20510;partial=true;pseudo=true;start_range=.,1 NZ_NPOH01000021.1 Protein Homology CDS 1 725 . - 0 ID=cds-CCO46_RS20525;Parent=gene-CCO46_RS20525;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232919.1;locus_tag=CCO46_RS20525;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 818 1387 . + . ID=gene-CCO46_RS20530;Name=CCO46_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20530;old_locus_tag=CCO46_20515 NZ_NPOH01000021.1 Protein Homology CDS 818 1387 . + 0 ID=cds-WP_000690667.1;Parent=gene-CCO46_RS20530;Dbxref=GenBank:WP_000690667.1;Name=WP_000690667.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690667.1;locus_tag=CCO46_RS20530;product=recombinase family protein;protein_id=WP_000690667.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 1468 1797 . + . ID=gene-CCO46_RS20535;Name=CCO46_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20535;old_locus_tag=CCO46_20520 NZ_NPOH01000021.1 Protein Homology CDS 1468 1797 . + 0 ID=cds-WP_000582019.1;Parent=gene-CCO46_RS20535;Dbxref=GenBank:WP_000582019.1;Name=WP_000582019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887652.1;locus_tag=CCO46_RS20535;product=holin;protein_id=WP_000582019.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 1794 2237 . + . ID=gene-CCO46_RS20540;Name=CCO46_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20540;old_locus_tag=CCO46_20525 NZ_NPOH01000021.1 Protein Homology CDS 1794 2237 . + 0 ID=cds-WP_000626769.1;Parent=gene-CCO46_RS20540;Dbxref=GenBank:WP_000626769.1;Name=WP_000626769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000580770.1;locus_tag=CCO46_RS20540;product=hypothetical protein;protein_id=WP_000626769.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 2224 2826 . + . ID=gene-CCO46_RS20545;Name=CCO46_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20545;old_locus_tag=CCO46_20530 NZ_NPOH01000021.1 Protein Homology CDS 2224 2826 . + 0 ID=cds-WP_000147404.1;Parent=gene-CCO46_RS20545;Dbxref=GenBank:WP_000147404.1;Name=WP_000147404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147404.1;locus_tag=CCO46_RS20545;product=hypothetical protein;protein_id=WP_000147404.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 2828 4777 . + . ID=gene-CCO46_RS25205;Name=CCO46_RS25205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25205;old_locus_tag=CCO46_20535 NZ_NPOH01000021.1 Protein Homology CDS 2828 4777 . + 0 ID=cds-WP_061375392.1;Parent=gene-CCO46_RS25205;Dbxref=GenBank:WP_061375392.1;Name=WP_061375392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000347096.1;locus_tag=CCO46_RS25205;product=hypothetical protein;protein_id=WP_061375392.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 4774 5133 . + . ID=gene-CCO46_RS20555;Name=CCO46_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20555;old_locus_tag=CCO46_20540 NZ_NPOH01000021.1 Protein Homology CDS 4774 5133 . + 0 ID=cds-WP_061375393.1;Parent=gene-CCO46_RS20555;Dbxref=GenBank:WP_061375393.1;Name=WP_061375393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175482.1;locus_tag=CCO46_RS20555;product=hypothetical protein;protein_id=WP_061375393.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 5146 8142 . + . ID=gene-CCO46_RS20560;Name=CCO46_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20560;old_locus_tag=CCO46_20545 NZ_NPOH01000021.1 Protein Homology CDS 5146 8142 . + 0 ID=cds-WP_097363474.1;Parent=gene-CCO46_RS20560;Dbxref=GenBank:WP_097363474.1;Name=WP_097363474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058526.1;locus_tag=CCO46_RS20560;product=hypothetical protein;protein_id=WP_097363474.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 8129 8422 . + . ID=gene-CCO46_RS20565;Name=CCO46_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20565;old_locus_tag=CCO46_20550 NZ_NPOH01000021.1 Protein Homology CDS 8129 8422 . + 0 ID=cds-WP_061375395.1;Parent=gene-CCO46_RS20565;Dbxref=GenBank:WP_061375395.1;Name=WP_061375395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447770.1;locus_tag=CCO46_RS20565;product=hypothetical protein;protein_id=WP_061375395.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 8452 8988 . - . ID=gene-CCO46_RS20570;Name=CCO46_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20570;old_locus_tag=CCO46_20555 NZ_NPOH01000021.1 Protein Homology CDS 8452 8988 . - 0 ID=cds-WP_061375396.1;Parent=gene-CCO46_RS20570;Dbxref=GenBank:WP_061375396.1;Name=WP_061375396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533579.1;locus_tag=CCO46_RS20570;product=single-stranded DNA-binding protein;protein_id=WP_061375396.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 9165 9719 . + . ID=gene-CCO46_RS20575;Name=CCO46_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20575;old_locus_tag=CCO46_20560 NZ_NPOH01000021.1 Protein Homology CDS 9165 9719 . + 0 ID=cds-WP_061375397.1;Parent=gene-CCO46_RS20575;Dbxref=GenBank:WP_061375397.1;Name=WP_061375397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000730552.1;locus_tag=CCO46_RS20575;product=lysozyme;protein_id=WP_061375397.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 9948 10478 . - . ID=gene-CCO46_RS20585;Name=CCO46_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20585;old_locus_tag=CCO46_20570 NZ_NPOH01000021.1 Protein Homology CDS 9948 10478 . - 0 ID=cds-WP_097363476.1;Parent=gene-CCO46_RS20585;Dbxref=GenBank:WP_097363476.1;Name=WP_097363476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000970450.1;locus_tag=CCO46_RS20585;product=ProQ/FINO family protein;protein_id=WP_097363476.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 10475 11482 . - . ID=gene-CCO46_RS20590;Name=CCO46_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20590;old_locus_tag=CCO46_20575 NZ_NPOH01000021.1 Protein Homology CDS 10475 11482 . - 0 ID=cds-WP_023222416.1;Parent=gene-CCO46_RS20590;Dbxref=GenBank:WP_023222416.1;Name=WP_023222416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222453.1;locus_tag=CCO46_RS20590;product=winged helix-turn-helix domain-containing protein;protein_id=WP_023222416.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 11625 12641 . - . ID=gene-CCO46_RS20595;Name=CCO46_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20595;old_locus_tag=CCO46_20580 NZ_NPOH01000021.1 Protein Homology CDS 11625 12641 . - 0 ID=cds-WP_097363477.1;Parent=gene-CCO46_RS20595;Dbxref=GenBank:WP_097363477.1;Name=WP_097363477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000132944.1;locus_tag=CCO46_RS20595;product=head processing protein;protein_id=WP_097363477.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 12634 14343 . - . ID=gene-CCO46_RS20600;Name=CCO46_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20600;old_locus_tag=CCO46_20585 NZ_NPOH01000021.1 Protein Homology CDS 12634 14343 . - 0 ID=cds-WP_097363478.1;Parent=gene-CCO46_RS20600;Dbxref=GenBank:WP_097363478.1;Name=WP_097363478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231390.1;locus_tag=CCO46_RS20600;product=phage portal protein;protein_id=WP_097363478.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 14419 21183 . + . ID=gene-CCO46_RS20605;Name=CCO46_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20605;old_locus_tag=CCO46_20590 NZ_NPOH01000021.1 Protein Homology CDS 14419 21183 . + 0 ID=cds-WP_097363479.1;Parent=gene-CCO46_RS20605;Dbxref=GenBank:WP_097363479.1;Name=WP_097363479.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569357.1;locus_tag=CCO46_RS20605;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_097363479.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 21217 21657 . + . ID=gene-CCO46_RS20610;Name=CCO46_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20610;old_locus_tag=CCO46_20595 NZ_NPOH01000021.1 Protein Homology CDS 21217 21657 . + 0 ID=cds-WP_000224041.1;Parent=gene-CCO46_RS20610;Dbxref=GenBank:WP_000224041.1;Name=WP_000224041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224041.1;locus_tag=CCO46_RS20610;product=hypothetical protein;protein_id=WP_000224041.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 22275 22406 . + . ID=gene-CCO46_RS25675;Name=CCO46_RS25675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25675 NZ_NPOH01000021.1 GeneMarkS-2+ CDS 22275 22406 . + 0 ID=cds-WP_254895353.1;Parent=gene-CCO46_RS25675;Dbxref=GenBank:WP_254895353.1;Name=WP_254895353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25675;product=hypothetical protein;protein_id=WP_254895353.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 22407 22652 . + . ID=gene-CCO46_RS20620;Name=CCO46_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20620;old_locus_tag=CCO46_20605 NZ_NPOH01000021.1 Protein Homology CDS 22407 22652 . + 0 ID=cds-WP_061375401.1;Parent=gene-CCO46_RS20620;Dbxref=GenBank:WP_061375401.1;Name=WP_061375401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186203.1;locus_tag=CCO46_RS20620;product=hypothetical protein;protein_id=WP_061375401.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 22656 23234 . + . ID=gene-CCO46_RS20625;Name=CCO46_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20625;old_locus_tag=CCO46_20610 NZ_NPOH01000021.1 Protein Homology CDS 22656 23234 . + 0 ID=cds-WP_023222411.1;Parent=gene-CCO46_RS20625;Dbxref=GenBank:WP_023222411.1;Name=WP_023222411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000943599.1;locus_tag=CCO46_RS20625;product=VRR-NUC domain-containing protein;protein_id=WP_023222411.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 23318 23473 . + . ID=gene-CCO46_RS25210;Name=CCO46_RS25210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25210 NZ_NPOH01000021.1 Protein Homology CDS 23318 23473 . + 0 ID=cds-WP_023222410.1;Parent=gene-CCO46_RS25210;Dbxref=GenBank:WP_023222410.1;Name=WP_023222410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000156603.1;locus_tag=CCO46_RS25210;product=hypothetical protein;protein_id=WP_023222410.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 23433 24044 . + . ID=gene-CCO46_RS20630;Name=CCO46_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20630;old_locus_tag=CCO46_20615 NZ_NPOH01000021.1 Protein Homology CDS 23433 24044 . + 0 ID=cds-WP_079892279.1;Parent=gene-CCO46_RS20630;Dbxref=GenBank:WP_079892279.1;Name=WP_079892279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012817939.1;locus_tag=CCO46_RS20630;product=hypothetical protein;protein_id=WP_079892279.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 23975 24601 . + . ID=gene-CCO46_RS20635;Name=CCO46_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20635;old_locus_tag=CCO46_20620 NZ_NPOH01000021.1 Protein Homology CDS 23975 24601 . + 0 ID=cds-WP_061375403.1;Parent=gene-CCO46_RS20635;Dbxref=GenBank:WP_061375403.1;Name=WP_061375403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569378.1;locus_tag=CCO46_RS20635;product=hypothetical protein;protein_id=WP_061375403.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 24598 25257 . + . ID=gene-CCO46_RS20640;Name=CCO46_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20640;old_locus_tag=CCO46_20625 NZ_NPOH01000021.1 Protein Homology CDS 24598 25257 . + 0 ID=cds-WP_097363480.1;Parent=gene-CCO46_RS20640;Dbxref=GenBank:WP_097363480.1;Name=WP_097363480.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074642.1;locus_tag=CCO46_RS20640;product=metallophosphoesterase;protein_id=WP_097363480.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 25262 25975 . + . ID=gene-CCO46_RS20645;Name=CCO46_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20645;old_locus_tag=CCO46_20630 NZ_NPOH01000021.1 Protein Homology CDS 25262 25975 . + 0 ID=cds-WP_080204392.1;Parent=gene-CCO46_RS20645;Dbxref=GenBank:WP_080204392.1;Name=WP_080204392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684867.1;locus_tag=CCO46_RS20645;product=phosphohydrolase;protein_id=WP_080204392.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 26054 26272 . + . ID=gene-CCO46_RS20650;Name=CCO46_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20650;old_locus_tag=CCO46_20635 NZ_NPOH01000021.1 Protein Homology CDS 26054 26272 . + 0 ID=cds-WP_001235989.1;Parent=gene-CCO46_RS20650;Dbxref=GenBank:WP_001235989.1;Name=WP_001235989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001235989.1;locus_tag=CCO46_RS20650;product=hypothetical protein;protein_id=WP_001235989.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 26275 27537 . + . ID=gene-CCO46_RS20655;Name=CCO46_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20655;old_locus_tag=CCO46_20640 NZ_NPOH01000021.1 Protein Homology CDS 26275 27537 . + 0 ID=cds-WP_097363481.1;Parent=gene-CCO46_RS20655;Dbxref=GenBank:WP_097363481.1;Name=WP_097363481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001468757.1;locus_tag=CCO46_RS20655;product=hypothetical protein;protein_id=WP_097363481.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 28163 28654 . + . ID=gene-CCO46_RS20665;Name=CCO46_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20665;old_locus_tag=CCO46_20650 NZ_NPOH01000021.1 GeneMarkS-2+ CDS 28163 28654 . + 0 ID=cds-WP_097363483.1;Parent=gene-CCO46_RS20665;Dbxref=GenBank:WP_097363483.1;Name=WP_097363483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS20665;product=hypothetical protein;protein_id=WP_097363483.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 28651 29046 . + . ID=gene-CCO46_RS20670;Name=CCO46_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20670;old_locus_tag=CCO46_20655 NZ_NPOH01000021.1 Protein Homology CDS 28651 29046 . + 0 ID=cds-WP_097363484.1;Parent=gene-CCO46_RS20670;Dbxref=GenBank:WP_097363484.1;Name=WP_097363484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000426669.1;locus_tag=CCO46_RS20670;product=hypothetical protein;protein_id=WP_097363484.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 29043 29255 . + . ID=gene-CCO46_RS20675;Name=CCO46_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20675;old_locus_tag=CCO46_20660 NZ_NPOH01000021.1 GeneMarkS-2+ CDS 29043 29255 . + 0 ID=cds-WP_097363485.1;Parent=gene-CCO46_RS20675;Dbxref=GenBank:WP_097363485.1;Name=WP_097363485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS20675;product=hypothetical protein;protein_id=WP_097363485.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 29252 29872 . + . ID=gene-CCO46_RS25305;Name=CCO46_RS25305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25305 NZ_NPOH01000021.1 Protein Homology CDS 29252 29872 . + 0 ID=cds-WP_201794785.1;Parent=gene-CCO46_RS25305;Dbxref=GenBank:WP_201794785.1;Name=WP_201794785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156708.1;locus_tag=CCO46_RS25305;product=hypothetical protein;protein_id=WP_201794785.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 29884 30507 . + . ID=gene-CCO46_RS20685;Name=CCO46_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20685;old_locus_tag=CCO46_20670 NZ_NPOH01000021.1 Protein Homology CDS 29884 30507 . + 0 ID=cds-WP_201794786.1;Parent=gene-CCO46_RS20685;Dbxref=GenBank:WP_201794786.1;Name=WP_201794786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831905.1;locus_tag=CCO46_RS20685;product=hypothetical protein;protein_id=WP_201794786.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 30504 30851 . + . ID=gene-CCO46_RS20690;Name=CCO46_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20690;old_locus_tag=CCO46_20675 NZ_NPOH01000021.1 Protein Homology CDS 30504 30851 . + 0 ID=cds-WP_023217208.1;Parent=gene-CCO46_RS20690;Dbxref=GenBank:WP_023217208.1;Name=WP_023217208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727904.1;locus_tag=CCO46_RS20690;product=hypothetical protein;protein_id=WP_023217208.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 30848 31684 . + . ID=gene-CCO46_RS20695;Name=CCO46_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20695;old_locus_tag=CCO46_20680 NZ_NPOH01000021.1 Protein Homology CDS 30848 31684 . + 0 ID=cds-WP_097363486.1;Parent=gene-CCO46_RS20695;Dbxref=GenBank:WP_097363486.1;Name=WP_097363486.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160792.1;locus_tag=CCO46_RS20695;product=DNA adenine methylase;protein_id=WP_097363486.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 31681 31902 . + . ID=gene-CCO46_RS20700;Name=CCO46_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20700;old_locus_tag=CCO46_20685 NZ_NPOH01000021.1 Protein Homology CDS 31681 31902 . + 0 ID=cds-WP_061375410.1;Parent=gene-CCO46_RS20700;Dbxref=GenBank:WP_061375410.1;Name=WP_061375410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206647.1;locus_tag=CCO46_RS20700;product=hypothetical protein;protein_id=WP_061375410.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 31899 32420 . + . ID=gene-CCO46_RS20705;Name=CCO46_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20705;old_locus_tag=CCO46_20690 NZ_NPOH01000021.1 Protein Homology CDS 31899 32420 . + 0 ID=cds-WP_097363487.1;Parent=gene-CCO46_RS20705;Dbxref=GenBank:WP_097363487.1;Name=WP_097363487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000071068.1;locus_tag=CCO46_RS20705;product=DUF262 domain-containing protein;protein_id=WP_097363487.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 32417 32995 . + . ID=gene-CCO46_RS20710;Name=CCO46_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20710;old_locus_tag=CCO46_20695 NZ_NPOH01000021.1 Protein Homology CDS 32417 32995 . + 0 ID=cds-WP_097363488.1;Parent=gene-CCO46_RS20710;Dbxref=GenBank:WP_097363488.1;Name=WP_097363488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065097.1;locus_tag=CCO46_RS20710;product=hypothetical protein;protein_id=WP_097363488.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 33226 33519 . + . ID=gene-CCO46_RS20715;Name=CCO46_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20715;old_locus_tag=CCO46_20700 NZ_NPOH01000021.1 Protein Homology CDS 33226 33519 . + 0 ID=cds-WP_000267991.1;Parent=gene-CCO46_RS20715;Dbxref=GenBank:WP_000267991.1;Name=WP_000267991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000267992.1;locus_tag=CCO46_RS20715;product=hypothetical protein;protein_id=WP_000267991.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 33516 34742 . + . ID=gene-CCO46_RS25905;Name=CCO46_RS25905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25905 NZ_NPOH01000021.1 Protein Homology CDS 33516 34742 . + 0 ID=cds-WP_237585220.1;Parent=gene-CCO46_RS25905;Dbxref=GenBank:WP_237585220.1;Name=WP_237585220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000156436.1;locus_tag=CCO46_RS25905;product=hypothetical protein;protein_id=WP_237585220.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 34856 35404 . + . ID=gene-CCO46_RS25555;Name=CCO46_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25555 NZ_NPOH01000021.1 Protein Homology CDS 34856 35404 . + 0 ID=cds-WP_237585221.1;Parent=gene-CCO46_RS25555;Dbxref=GenBank:WP_237585221.1;Name=WP_237585221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513020.1;locus_tag=CCO46_RS25555;product=hypothetical protein;protein_id=WP_237585221.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 35481 35747 . + . ID=gene-CCO46_RS20730;Name=CCO46_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20730;old_locus_tag=CCO46_20715 NZ_NPOH01000021.1 Protein Homology CDS 35481 35747 . + 0 ID=cds-WP_046594002.1;Parent=gene-CCO46_RS20730;Dbxref=GenBank:WP_046594002.1;Name=WP_046594002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441413.1;locus_tag=CCO46_RS20730;product=hypothetical protein;protein_id=WP_046594002.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 35845 36120 . + . ID=gene-CCO46_RS20735;Name=CCO46_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20735;old_locus_tag=CCO46_20720 NZ_NPOH01000021.1 Protein Homology CDS 35845 36120 . + 0 ID=cds-WP_061375415.1;Parent=gene-CCO46_RS20735;Dbxref=GenBank:WP_061375415.1;Name=WP_061375415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229736.1;locus_tag=CCO46_RS20735;product=DUF1456 family protein;protein_id=WP_061375415.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 36353 36925 . - . ID=gene-CCO46_RS20740;Name=CCO46_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20740;old_locus_tag=CCO46_20725 NZ_NPOH01000021.1 Protein Homology CDS 36353 36925 . - 0 ID=cds-WP_047592427.1;Parent=gene-CCO46_RS20740;Dbxref=GenBank:WP_047592427.1;Name=WP_047592427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001133669.1;locus_tag=CCO46_RS20740;product=hypothetical protein;protein_id=WP_047592427.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 37114 37395 . + . ID=gene-CCO46_RS20745;Name=CCO46_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20745;old_locus_tag=CCO46_20730 NZ_NPOH01000021.1 Protein Homology CDS 37114 37395 . + 0 ID=cds-WP_306372120.1;Parent=gene-CCO46_RS20745;Dbxref=GenBank:WP_306372120.1;Name=WP_306372120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001371935.1;locus_tag=CCO46_RS20745;product=hypothetical protein;protein_id=WP_306372120.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 37404 38486 . + . ID=gene-CCO46_RS25560;Name=CCO46_RS25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25560 NZ_NPOH01000021.1 Protein Homology CDS 37404 38486 . + 0 ID=cds-WP_237585222.1;Parent=gene-CCO46_RS25560;Dbxref=GenBank:WP_237585222.1;Name=WP_237585222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045163.3;locus_tag=CCO46_RS25560;product=DUF6884 domain-containing protein;protein_id=WP_237585222.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 38479 38808 . + . ID=gene-CCO46_RS20765;Name=CCO46_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20765;old_locus_tag=CCO46_20750 NZ_NPOH01000021.1 Protein Homology CDS 38479 38808 . + 0 ID=cds-WP_061375416.1;Parent=gene-CCO46_RS20765;Dbxref=GenBank:WP_061375416.1;Name=WP_061375416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281794.1;locus_tag=CCO46_RS20765;product=hypothetical protein;protein_id=WP_061375416.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 38820 39854 . + . ID=gene-CCO46_RS20770;Name=CCO46_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20770;old_locus_tag=CCO46_20755 NZ_NPOH01000021.1 Protein Homology CDS 38820 39854 . + 0 ID=cds-WP_097363489.1;Parent=gene-CCO46_RS20770;Dbxref=GenBank:WP_097363489.1;Name=WP_097363489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648816.1;locus_tag=CCO46_RS20770;product=DUF968 domain-containing protein;protein_id=WP_097363489.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 39981 40400 . + . ID=gene-CCO46_RS20775;Name=CCO46_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20775;old_locus_tag=CCO46_20760 NZ_NPOH01000021.1 Protein Homology CDS 39981 40400 . + 0 ID=cds-WP_000089358.1;Parent=gene-CCO46_RS20775;Dbxref=GenBank:WP_000089358.1;Name=WP_000089358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089358.1;locus_tag=CCO46_RS20775;product=hypothetical protein;protein_id=WP_000089358.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 40510 41697 . + . ID=gene-CCO46_RS20780;Name=CCO46_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20780;old_locus_tag=CCO46_20765 NZ_NPOH01000021.1 Protein Homology CDS 40510 41697 . + 0 ID=cds-WP_061375417.1;Parent=gene-CCO46_RS20780;Dbxref=GenBank:WP_061375417.1;Name=WP_061375417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219627.1;locus_tag=CCO46_RS20780;product=terminase;protein_id=WP_061375417.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 41697 43181 . + . ID=gene-CCO46_RS20785;Name=CCO46_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20785;old_locus_tag=CCO46_20770 NZ_NPOH01000021.1 Protein Homology CDS 41697 43181 . + 0 ID=cds-WP_061375418.1;Parent=gene-CCO46_RS20785;Dbxref=GenBank:WP_061375418.1;Name=WP_061375418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124153.1;locus_tag=CCO46_RS20785;product=hypothetical protein;protein_id=WP_061375418.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 43208 44059 . - . ID=gene-CCO46_RS20790;Name=CCO46_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20790;old_locus_tag=CCO46_20775 NZ_NPOH01000021.1 Protein Homology CDS 43208 44059 . - 0 ID=cds-WP_000248802.1;Parent=gene-CCO46_RS20790;Dbxref=GenBank:WP_000248802.1;Name=WP_000248802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000611663.1;locus_tag=CCO46_RS20790;product=phage repressor protein C1;protein_id=WP_000248802.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 44168 44377 . - . ID=gene-CCO46_RS20795;Name=CCO46_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20795;old_locus_tag=CCO46_20780 NZ_NPOH01000021.1 Protein Homology CDS 44168 44377 . - 0 ID=cds-WP_000864014.1;Parent=gene-CCO46_RS20795;Dbxref=GenBank:WP_000864014.1;Name=WP_000864014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864014.1;locus_tag=CCO46_RS20795;product=hypothetical protein;protein_id=WP_000864014.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 44630 44752 . - . ID=gene-CCO46_RS25215;Name=CCO46_RS25215;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS25215 NZ_NPOH01000021.1 tRNAscan-SE tRNA 44630 44752 . - . ID=rna-CCO46_RS25215;Parent=gene-CCO46_RS25215;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS25215;product=tRNA-OTHER NZ_NPOH01000021.1 tRNAscan-SE exon 44630 44752 . - . ID=exon-CCO46_RS25215-1;Parent=rna-CCO46_RS25215;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS25215;product=tRNA-OTHER NZ_NPOH01000021.1 RefSeq gene 45273 45479 . + . ID=gene-CCO46_RS20800;Name=CCO46_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20800;old_locus_tag=CCO46_20785 NZ_NPOH01000021.1 Protein Homology CDS 45273 45479 . + 0 ID=cds-WP_061375419.1;Parent=gene-CCO46_RS20800;Dbxref=GenBank:WP_061375419.1;Name=WP_061375419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000968892.1;locus_tag=CCO46_RS20800;product=hypothetical protein;protein_id=WP_061375419.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 45519 46589 . + . ID=gene-CCO46_RS20805;Name=CCO46_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20805;old_locus_tag=CCO46_20790 NZ_NPOH01000021.1 Protein Homology CDS 45519 46589 . + 0 ID=cds-WP_097363490.1;Parent=gene-CCO46_RS20805;Dbxref=GenBank:WP_097363490.1;Name=WP_097363490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533532.1;locus_tag=CCO46_RS20805;product=hypothetical protein;protein_id=WP_097363490.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 46586 46801 . + . ID=gene-CCO46_RS20810;Name=CCO46_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20810;old_locus_tag=CCO46_20795 NZ_NPOH01000021.1 Protein Homology CDS 46586 46801 . + 0 ID=cds-WP_061375421.1;Parent=gene-CCO46_RS20810;Dbxref=GenBank:WP_061375421.1;Name=WP_061375421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804048.1;locus_tag=CCO46_RS20810;product=hypothetical protein;protein_id=WP_061375421.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 46809 47837 . + . ID=gene-CCO46_RS20815;Name=CCO46_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20815;old_locus_tag=CCO46_20800 NZ_NPOH01000021.1 Protein Homology CDS 46809 47837 . + 0 ID=cds-WP_097363491.1;Parent=gene-CCO46_RS20815;Dbxref=GenBank:WP_097363491.1;Name=WP_097363491.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000185184.1;locus_tag=CCO46_RS20815;product=tyrosine-type recombinase/integrase;protein_id=WP_097363491.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 48058 48234 . + . ID=gene-CCO46_RS25565;Name=CCO46_RS25565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25565 NZ_NPOH01000021.1 GeneMarkS-2+ CDS 48058 48234 . + 0 ID=cds-WP_235596525.1;Parent=gene-CCO46_RS25565;Dbxref=GenBank:WP_235596525.1;Name=WP_235596525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25565;product=lysogeny establishment protein;protein_id=WP_235596525.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 48231 48389 . + . ID=gene-CCO46_RS25220;Name=CCO46_RS25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25220 NZ_NPOH01000021.1 Protein Homology CDS 48231 48389 . + 0 ID=cds-WP_162855160.1;Parent=gene-CCO46_RS25220;Dbxref=GenBank:WP_162855160.1;Name=WP_162855160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252573.1;locus_tag=CCO46_RS25220;product=hypothetical protein;protein_id=WP_162855160.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 48504 49256 . + . ID=gene-CCO46_RS20825;Name=CCO46_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20825;old_locus_tag=CCO46_20810 NZ_NPOH01000021.1 GeneMarkS-2+ CDS 48504 49256 . + 0 ID=cds-WP_097363492.1;Parent=gene-CCO46_RS20825;Dbxref=GenBank:WP_097363492.1;Name=WP_097363492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS20825;product=hypothetical protein;protein_id=WP_097363492.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 49253 49867 . + . ID=gene-CCO46_RS20830;Name=CCO46_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20830;old_locus_tag=CCO46_20815 NZ_NPOH01000021.1 Protein Homology CDS 49253 49867 . + 0 ID=cds-WP_097363493.1;Parent=gene-CCO46_RS20830;Dbxref=GenBank:WP_097363493.1;Name=WP_097363493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000527000.1;locus_tag=CCO46_RS20830;product=hypothetical protein;protein_id=WP_097363493.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 49854 50297 . + . ID=gene-CCO46_RS20835;Name=CCO46_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20835;old_locus_tag=CCO46_20820 NZ_NPOH01000021.1 Protein Homology CDS 49854 50297 . + 0 ID=cds-WP_097363494.1;Parent=gene-CCO46_RS20835;Dbxref=GenBank:WP_097363494.1;Name=WP_097363494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000169636.1;locus_tag=CCO46_RS20835;product=phage protein NinX family protein;protein_id=WP_097363494.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 50300 50623 . + . ID=gene-CCO46_RS20840;Name=CCO46_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20840;old_locus_tag=CCO46_20825 NZ_NPOH01000021.1 Protein Homology CDS 50300 50623 . + 0 ID=cds-WP_061375425.1;Parent=gene-CCO46_RS20840;Dbxref=GenBank:WP_061375425.1;Name=WP_061375425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000934524.1;locus_tag=CCO46_RS20840;product=hypothetical protein;protein_id=WP_061375425.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 50743 51294 . + . ID=gene-CCO46_RS20845;Name=CCO46_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20845;old_locus_tag=CCO46_20830 NZ_NPOH01000021.1 Protein Homology CDS 50743 51294 . + 0 ID=cds-WP_097363495.1;Parent=gene-CCO46_RS20845;Dbxref=GenBank:WP_097363495.1;Name=WP_097363495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533528.1;locus_tag=CCO46_RS20845;product=Ref family recombination enhancement nuclease;protein_id=WP_097363495.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 51322 51573 . + . ID=gene-CCO46_RS20850;Name=CCO46_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20850;old_locus_tag=CCO46_20835 NZ_NPOH01000021.1 Protein Homology CDS 51322 51573 . + 0 ID=cds-WP_097363496.1;Parent=gene-CCO46_RS20850;Dbxref=GenBank:WP_097363496.1;Name=WP_097363496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354002.1;locus_tag=CCO46_RS20850;product=hypothetical protein;protein_id=WP_097363496.1;transl_table=11 NZ_NPOH01000021.1 RefSeq pseudogene 51597 51872 . + . ID=gene-CCO46_RS20855;Name=CCO46_RS20855;end_range=51872,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS20855;old_locus_tag=CCO46_20840;partial=true;pseudo=true;start_range=.,51597 NZ_NPOH01000021.1 Protein Homology CDS 51597 51872 . + 0 ID=cds-CCO46_RS20855;Parent=gene-CCO46_RS20855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=51872,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062012.1;locus_tag=CCO46_RS20855;partial=true;product=DUF2829 domain-containing protein;pseudo=true;start_range=.,51597;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 51879 52088 . + . ID=gene-CCO46_RS25910;Name=CCO46_RS25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25910 NZ_NPOH01000021.1 Protein Homology CDS 51879 52088 . + 0 ID=cds-WP_371333529.1;Parent=gene-CCO46_RS25910;Dbxref=GenBank:WP_371333529.1;Name=WP_371333529.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047032.2;locus_tag=CCO46_RS25910;product=crAss001_48 related protein;protein_id=WP_371333529.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 52109 52774 . + . ID=gene-CCO46_RS20860;Name=CCO46_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20860;old_locus_tag=CCO46_20845 NZ_NPOH01000021.1 GeneMarkS-2+ CDS 52109 52774 . + 0 ID=cds-WP_097363497.1;Parent=gene-CCO46_RS20860;Dbxref=GenBank:WP_097363497.1;Name=WP_097363497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS20860;product=adenylosuccinate synthase;protein_id=WP_097363497.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 52997 53638 . + . ID=gene-CCO46_RS20865;Name=CCO46_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20865;old_locus_tag=CCO46_20850 NZ_NPOH01000021.1 Protein Homology CDS 52997 53638 . + 0 ID=cds-WP_097363498.1;Parent=gene-CCO46_RS20865;Dbxref=GenBank:WP_097363498.1;Name=WP_097363498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231388.1;locus_tag=CCO46_RS20865;product=maturation control protein;protein_id=WP_097363498.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 53801 54178 . + . ID=gene-CCO46_RS20870;Name=CCO46_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20870;old_locus_tag=CCO46_20855 NZ_NPOH01000021.1 Protein Homology CDS 53801 54178 . + 0 ID=cds-WP_061375428.1;Parent=gene-CCO46_RS20870;Dbxref=GenBank:WP_061375428.1;Name=WP_061375428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000235789.1;locus_tag=CCO46_RS20870;product=hypothetical protein;protein_id=WP_061375428.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 54191 55408 . + . ID=gene-CCO46_RS20875;Name=CCO46_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20875;old_locus_tag=CCO46_20860 NZ_NPOH01000021.1 Protein Homology CDS 54191 55408 . + 0 ID=cds-WP_061375429.1;Parent=gene-CCO46_RS20875;Dbxref=GenBank:WP_061375429.1;Name=WP_061375429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001141912.1;locus_tag=CCO46_RS20875;product=hypothetical protein;protein_id=WP_061375429.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 55412 56152 . + . ID=gene-CCO46_RS20880;Name=CCO46_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20880;old_locus_tag=CCO46_20865 NZ_NPOH01000021.1 Protein Homology CDS 55412 56152 . + 0 ID=cds-WP_061375430.1;Parent=gene-CCO46_RS20880;Dbxref=GenBank:WP_061375430.1;Name=WP_061375430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000896792.1;locus_tag=CCO46_RS20880;product=hypothetical protein;protein_id=WP_061375430.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 56136 56927 . + . ID=gene-CCO46_RS20885;Name=CCO46_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20885;old_locus_tag=CCO46_20870 NZ_NPOH01000021.1 Protein Homology CDS 56136 56927 . + 0 ID=cds-WP_023222337.1;Parent=gene-CCO46_RS20885;Dbxref=GenBank:WP_023222337.1;Name=WP_023222337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224251.1;locus_tag=CCO46_RS20885;product=hypothetical protein;protein_id=WP_023222337.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 56956 57972 . + . ID=gene-CCO46_RS20890;Name=CCO46_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20890;old_locus_tag=CCO46_20875 NZ_NPOH01000021.1 Protein Homology CDS 56956 57972 . + 0 ID=cds-WP_023222336.1;Parent=gene-CCO46_RS20890;Dbxref=GenBank:WP_023222336.1;Name=WP_023222336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000212027.1;locus_tag=CCO46_RS20890;product=hypothetical protein;protein_id=WP_023222336.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 57965 58573 . + . ID=gene-CCO46_RS20895;Name=CCO46_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20895;old_locus_tag=CCO46_20880 NZ_NPOH01000021.1 Protein Homology CDS 57965 58573 . + 0 ID=cds-WP_061375431.1;Parent=gene-CCO46_RS20895;Dbxref=GenBank:WP_061375431.1;Name=WP_061375431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000527468.1;locus_tag=CCO46_RS20895;product=hypothetical protein;protein_id=WP_061375431.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 58886 59182 . - . ID=gene-CCO46_RS20900;Name=CCO46_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20900;old_locus_tag=CCO46_20885 NZ_NPOH01000021.1 Protein Homology CDS 58886 59182 . - 0 ID=cds-WP_061375432.1;Parent=gene-CCO46_RS20900;Dbxref=GenBank:WP_061375432.1;Name=WP_061375432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245448.1;locus_tag=CCO46_RS20900;product=hypothetical protein;protein_id=WP_061375432.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 59182 60540 . - . ID=gene-CCO46_RS20905;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CCO46_RS20905;old_locus_tag=CCO46_20890 NZ_NPOH01000021.1 Protein Homology CDS 59182 60540 . - 0 ID=cds-WP_061375433.1;Parent=gene-CCO46_RS20905;Dbxref=GenBank:WP_061375433.1;Name=WP_061375433.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276607.1;locus_tag=CCO46_RS20905;product=replicative DNA helicase;protein_id=WP_061375433.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 61649 62347 . - . ID=gene-CCO46_RS20910;Name=CCO46_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20910;old_locus_tag=CCO46_20895 NZ_NPOH01000021.1 Protein Homology CDS 61649 62347 . - 0 ID=cds-WP_097363499.1;Parent=gene-CCO46_RS20910;Dbxref=GenBank:WP_097363499.1;Name=WP_097363499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124708.1;locus_tag=CCO46_RS20910;product=hypothetical protein;protein_id=WP_097363499.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 62347 64860 . - . ID=gene-CCO46_RS20915;Name=CCO46_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20915;old_locus_tag=CCO46_20900 NZ_NPOH01000021.1 Protein Homology CDS 62347 64860 . - 0 ID=cds-WP_097363500.1;Parent=gene-CCO46_RS20915;Dbxref=GenBank:WP_097363500.1;Name=WP_097363500.1;Ontology_term=GO:0009307,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061763.1;locus_tag=CCO46_RS20915;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_097363500.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 64860 65027 . - . ID=gene-CCO46_RS25225;Name=CCO46_RS25225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25225 NZ_NPOH01000021.1 GeneMarkS-2+ CDS 64860 65027 . - 0 ID=cds-WP_170947419.1;Parent=gene-CCO46_RS25225;Dbxref=GenBank:WP_170947419.1;Name=WP_170947419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25225;product=hypothetical protein;protein_id=WP_170947419.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 65024 65932 . - . ID=gene-CCO46_RS20920;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=CCO46_RS20920;old_locus_tag=CCO46_20905 NZ_NPOH01000021.1 Protein Homology CDS 65024 65932 . - 0 ID=cds-WP_061375436.1;Parent=gene-CCO46_RS20920;Dbxref=GenBank:WP_061375436.1;Name=WP_061375436.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001702258.1;locus_tag=CCO46_RS20920;product=recombination-associated protein RdgC;protein_id=WP_061375436.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 65925 66209 . - . ID=gene-CCO46_RS20925;Name=CCO46_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20925;old_locus_tag=CCO46_20910 NZ_NPOH01000021.1 Protein Homology CDS 65925 66209 . - 0 ID=cds-WP_061375437.1;Parent=gene-CCO46_RS20925;Dbxref=GenBank:WP_061375437.1;Name=WP_061375437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767433.1;locus_tag=CCO46_RS20925;product=hypothetical protein;protein_id=WP_061375437.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 66661 67443 . + . ID=gene-CCO46_RS20935;Name=CCO46_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20935;old_locus_tag=CCO46_20920 NZ_NPOH01000021.1 Protein Homology CDS 66661 67443 . + 0 ID=cds-WP_061375438.1;Parent=gene-CCO46_RS20935;Dbxref=GenBank:WP_061375438.1;Name=WP_061375438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000890192.1;locus_tag=CCO46_RS20935;product=hypothetical protein;protein_id=WP_061375438.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 67475 67897 . + . ID=gene-CCO46_RS20940;Name=CCO46_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20940;old_locus_tag=CCO46_20925 NZ_NPOH01000021.1 Protein Homology CDS 67475 67897 . + 0 ID=cds-WP_080204366.1;Parent=gene-CCO46_RS20940;Dbxref=GenBank:WP_080204366.1;Name=WP_080204366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001615620.1;locus_tag=CCO46_RS20940;product=ppfA;protein_id=WP_080204366.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 67905 68063 . + . ID=gene-CCO46_RS25230;Name=CCO46_RS25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25230 NZ_NPOH01000021.1 Protein Homology CDS 67905 68063 . + 0 ID=cds-WP_157701176.1;Parent=gene-CCO46_RS25230;Dbxref=GenBank:WP_157701176.1;Name=WP_157701176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000336812.1;locus_tag=CCO46_RS25230;product=hypothetical protein;protein_id=WP_157701176.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 68075 68437 . + . ID=gene-CCO46_RS20945;Name=CCO46_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20945;old_locus_tag=CCO46_20930 NZ_NPOH01000021.1 Protein Homology CDS 68075 68437 . + 0 ID=cds-WP_061375440.1;Parent=gene-CCO46_RS20945;Dbxref=GenBank:WP_061375440.1;Name=WP_061375440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129614.1;locus_tag=CCO46_RS20945;product=Gp49 family protein;protein_id=WP_061375440.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 68764 69624 . + . ID=gene-CCO46_RS20950;Name=CCO46_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20950;old_locus_tag=CCO46_20935 NZ_NPOH01000021.1 Protein Homology CDS 68764 69624 . + 0 ID=cds-WP_023222099.1;Parent=gene-CCO46_RS20950;Dbxref=GenBank:WP_023222099.1;Name=WP_023222099.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361425.1;locus_tag=CCO46_RS20950;product=RepB family plasmid replication initiator protein;protein_id=WP_023222099.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 70019 71215 . + . ID=gene-CCO46_RS20955;Name=CCO46_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20955;old_locus_tag=CCO46_20940 NZ_NPOH01000021.1 Protein Homology CDS 70019 71215 . + 0 ID=cds-WP_023222098.1;Parent=gene-CCO46_RS20955;Dbxref=GenBank:WP_023222098.1;Name=WP_023222098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285362.1;locus_tag=CCO46_RS20955;product=AAA family ATPase;protein_id=WP_023222098.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 71232 72230 . + . ID=gene-CCO46_RS20960;Name=CCO46_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20960;old_locus_tag=CCO46_20945 NZ_NPOH01000021.1 Protein Homology CDS 71232 72230 . + 0 ID=cds-WP_023222097.1;Parent=gene-CCO46_RS20960;Dbxref=GenBank:WP_023222097.1;Name=WP_023222097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064274.1;locus_tag=CCO46_RS20960;product=ParB family protein;protein_id=WP_023222097.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 72454 74157 . + . ID=gene-CCO46_RS20965;Name=CCO46_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20965;old_locus_tag=CCO46_20950 NZ_NPOH01000021.1 Protein Homology CDS 72454 74157 . + 0 ID=cds-WP_061375441.1;Parent=gene-CCO46_RS20965;Dbxref=GenBank:WP_061375441.1;Name=WP_061375441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061880.1;locus_tag=CCO46_RS20965;product=hypothetical protein;protein_id=WP_061375441.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 74212 75810 . + . ID=gene-CCO46_RS20970;Name=CCO46_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20970;old_locus_tag=CCO46_20955 NZ_NPOH01000021.1 Protein Homology CDS 74212 75810 . + 0 ID=cds-WP_097363501.1;Parent=gene-CCO46_RS20970;Dbxref=GenBank:WP_097363501.1;Name=WP_097363501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774496.1;locus_tag=CCO46_RS20970;product=hypothetical protein;protein_id=WP_097363501.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 75822 76640 . + . ID=gene-CCO46_RS20975;Name=CCO46_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20975;old_locus_tag=CCO46_20960 NZ_NPOH01000021.1 Protein Homology CDS 75822 76640 . + 0 ID=cds-WP_023222094.1;Parent=gene-CCO46_RS20975;Dbxref=GenBank:WP_023222094.1;Name=WP_023222094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042322.1;locus_tag=CCO46_RS20975;product=hypothetical protein;protein_id=WP_023222094.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 76683 77258 . + . ID=gene-CCO46_RS20980;Name=CCO46_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20980;old_locus_tag=CCO46_20965 NZ_NPOH01000021.1 Protein Homology CDS 76683 77258 . + 0 ID=cds-WP_237585223.1;Parent=gene-CCO46_RS20980;Dbxref=GenBank:WP_237585223.1;Name=WP_237585223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035303.1;locus_tag=CCO46_RS20980;product=hypothetical protein;protein_id=WP_237585223.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 77269 77778 . + . ID=gene-CCO46_RS20985;Name=CCO46_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20985;old_locus_tag=CCO46_20970 NZ_NPOH01000021.1 Protein Homology CDS 77269 77778 . + 0 ID=cds-WP_000510130.1;Parent=gene-CCO46_RS20985;Dbxref=GenBank:WP_000510130.1;Name=WP_000510130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509944.1;locus_tag=CCO46_RS20985;product=hypothetical protein;protein_id=WP_000510130.1;transl_table=11 NZ_NPOH01000021.1 RefSeq pseudogene 77945 78127 . - . ID=gene-CCO46_RS20990;Name=CCO46_RS20990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS20990;old_locus_tag=CCO46_20975;partial=true;pseudo=true;start_range=.,77945 NZ_NPOH01000021.1 Protein Homology CDS 77945 78127 . - 0 ID=cds-CCO46_RS20990;Parent=gene-CCO46_RS20990;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127437.1;locus_tag=CCO46_RS20990;partial=true;product=DNA-binding protein;pseudo=true;start_range=.,77945;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 78124 78585 . - . ID=gene-CCO46_RS20995;Name=CCO46_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS20995;old_locus_tag=CCO46_20980 NZ_NPOH01000021.1 Protein Homology CDS 78124 78585 . - 0 ID=cds-WP_061375443.1;Parent=gene-CCO46_RS20995;Dbxref=GenBank:WP_061375443.1;Name=WP_061375443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535509.1;locus_tag=CCO46_RS20995;product=type II toxin-antitoxin system YhaV family toxin;protein_id=WP_061375443.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 78585 78920 . - . ID=gene-CCO46_RS21000;Name=CCO46_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21000;old_locus_tag=CCO46_20985 NZ_NPOH01000021.1 Protein Homology CDS 78585 78920 . - 0 ID=cds-WP_061375444.1;Parent=gene-CCO46_RS21000;Dbxref=GenBank:WP_061375444.1;Name=WP_061375444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005762317.1;locus_tag=CCO46_RS21000;product=type II toxin-antitoxin system PrlF family antitoxin;protein_id=WP_061375444.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 79062 80069 . - . ID=gene-CCO46_RS21005;Name=CCO46_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21005;old_locus_tag=CCO46_20990 NZ_NPOH01000021.1 Protein Homology CDS 79062 80069 . - 0 ID=cds-WP_061375445.1;Parent=gene-CCO46_RS21005;Dbxref=GenBank:WP_061375445.1;Name=WP_061375445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858234.1;locus_tag=CCO46_RS21005;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_061375445.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 80069 80287 . - . ID=gene-CCO46_RS21010;Name=CCO46_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21010;old_locus_tag=CCO46_20995 NZ_NPOH01000021.1 Protein Homology CDS 80069 80287 . - 0 ID=cds-WP_097363502.1;Parent=gene-CCO46_RS21010;Dbxref=GenBank:WP_097363502.1;Name=WP_097363502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000245715.1;locus_tag=CCO46_RS21010;product=host cell division inhibitor Icd-like protein;protein_id=WP_097363502.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 80756 81295 . + . ID=gene-CCO46_RS21020;Name=CCO46_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21020;old_locus_tag=CCO46_21005 NZ_NPOH01000021.1 Protein Homology CDS 80756 81295 . + 0 ID=cds-WP_023221719.1;Parent=gene-CCO46_RS21020;Dbxref=GenBank:WP_023221719.1;Name=WP_023221719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001228780.1;locus_tag=CCO46_RS21020;product=hypothetical protein;protein_id=WP_023221719.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 81401 81895 . + . ID=gene-CCO46_RS21025;Name=CCO46_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21025;old_locus_tag=CCO46_21010 NZ_NPOH01000021.1 Protein Homology CDS 81401 81895 . + 0 ID=cds-WP_064507199.1;Parent=gene-CCO46_RS21025;Dbxref=GenBank:WP_064507199.1;Name=WP_064507199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000780956.1;locus_tag=CCO46_RS21025;product=hypothetical protein;protein_id=WP_064507199.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 81962 82528 . + . ID=gene-CCO46_RS21030;Name=CCO46_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21030;old_locus_tag=CCO46_21015 NZ_NPOH01000021.1 Protein Homology CDS 81962 82528 . + 0 ID=cds-WP_061375446.1;Parent=gene-CCO46_RS21030;Dbxref=GenBank:WP_061375446.1;Name=WP_061375446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000188918.1;locus_tag=CCO46_RS21030;product=hypothetical protein;protein_id=WP_061375446.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 82536 83138 . + . ID=gene-CCO46_RS21035;Name=CCO46_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21035;old_locus_tag=CCO46_21020 NZ_NPOH01000021.1 Protein Homology CDS 82536 83138 . + 0 ID=cds-WP_000881476.1;Parent=gene-CCO46_RS21035;Dbxref=GenBank:WP_000881476.1;Name=WP_000881476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000881476.1;locus_tag=CCO46_RS21035;product=hypothetical protein;protein_id=WP_000881476.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 83151 84044 . + . ID=gene-CCO46_RS21040;Name=CCO46_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21040;old_locus_tag=CCO46_21025 NZ_NPOH01000021.1 Protein Homology CDS 83151 84044 . + 0 ID=cds-WP_000926257.1;Parent=gene-CCO46_RS21040;Dbxref=GenBank:WP_000926257.1;Name=WP_000926257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926257.1;locus_tag=CCO46_RS21040;product=hypothetical protein;protein_id=WP_000926257.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 84106 87336 . + . ID=gene-CCO46_RS21045;Name=CCO46_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21045;old_locus_tag=CCO46_21030 NZ_NPOH01000021.1 Protein Homology CDS 84106 87336 . + 0 ID=cds-WP_097363503.1;Parent=gene-CCO46_RS21045;Dbxref=GenBank:WP_097363503.1;Name=WP_097363503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000440155.1;locus_tag=CCO46_RS21045;product=transglycosylase SLT domain-containing protein;protein_id=WP_097363503.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 87336 87692 . + . ID=gene-CCO46_RS21050;Name=CCO46_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21050;old_locus_tag=CCO46_21035 NZ_NPOH01000021.1 Protein Homology CDS 87336 87692 . + 0 ID=cds-WP_061375448.1;Parent=gene-CCO46_RS21050;Dbxref=GenBank:WP_061375448.1;Name=WP_061375448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035046.1;locus_tag=CCO46_RS21050;product=hypothetical protein;protein_id=WP_061375448.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 87693 89135 . + . ID=gene-CCO46_RS21055;Name=CCO46_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21055;old_locus_tag=CCO46_21040 NZ_NPOH01000021.1 Protein Homology CDS 87693 89135 . + 0 ID=cds-WP_061375449.1;Parent=gene-CCO46_RS21055;Dbxref=GenBank:WP_061375449.1;Name=WP_061375449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047260.1;locus_tag=CCO46_RS21055;product=hypothetical protein;protein_id=WP_061375449.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 89135 90250 . + . ID=gene-CCO46_RS21060;Name=CCO46_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21060;old_locus_tag=CCO46_21045 NZ_NPOH01000021.1 Protein Homology CDS 89135 90250 . + 0 ID=cds-WP_000415792.1;Parent=gene-CCO46_RS21060;Dbxref=GenBank:WP_000415792.1;Name=WP_000415792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000415792.1;locus_tag=CCO46_RS21060;product=hypothetical protein;protein_id=WP_000415792.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 90310 90747 . + . ID=gene-CCO46_RS21065;Name=CCO46_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21065;old_locus_tag=CCO46_21050 NZ_NPOH01000021.1 Protein Homology CDS 90310 90747 . + 0 ID=cds-WP_000214206.1;Parent=gene-CCO46_RS21065;Dbxref=GenBank:WP_000214206.1;Name=WP_000214206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214206.1;locus_tag=CCO46_RS21065;product=hypothetical protein;protein_id=WP_000214206.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 90760 92868 . + . ID=gene-CCO46_RS25570;Name=CCO46_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25570 NZ_NPOH01000021.1 Protein Homology CDS 90760 92868 . + 0 ID=cds-WP_235596985.1;Parent=gene-CCO46_RS25570;Dbxref=GenBank:WP_235596985.1;Name=WP_235596985.1;Ontology_term=GO:0019062,GO:0046718;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274642.1;locus_tag=CCO46_RS25570;product=tail fiber protein;protein_id=WP_235596985.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 92838 93455 . + . ID=gene-CCO46_RS21080;Name=CCO46_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21080;old_locus_tag=CCO46_21065 NZ_NPOH01000021.1 Protein Homology CDS 92838 93455 . + 0 ID=cds-WP_077948432.1;Parent=gene-CCO46_RS21080;Dbxref=GenBank:WP_077948432.1;Name=WP_077948432.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461633.1;locus_tag=CCO46_RS21080;product=tail fiber assembly protein;protein_id=WP_077948432.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 93460 94044 . - . ID=gene-CCO46_RS21085;Name=CCO46_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21085;old_locus_tag=CCO46_21070 NZ_NPOH01000021.1 Protein Homology CDS 93460 94044 . - 0 ID=cds-WP_061375391.1;Parent=gene-CCO46_RS21085;Dbxref=GenBank:WP_061375391.1;Name=WP_061375391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394620.1;locus_tag=CCO46_RS21085;product=tail fiber assembly protein;protein_id=WP_061375391.1;transl_table=11 NZ_NPOH01000021.1 RefSeq gene 94044 95158 . - . ID=gene-CCO46_RS25575;Name=CCO46_RS25575;end_range=95158,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25575;partial=true NZ_NPOH01000021.1 Protein Homology CDS 94044 95158 . - 2 ID=cds-WP_237585224.1;Parent=gene-CCO46_RS25575;Dbxref=GenBank:WP_237585224.1;Name=WP_237585224.1;end_range=95158,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274645.1;locus_tag=CCO46_RS25575;partial=true;product=phage tail protein;protein_id=WP_237585224.1;transl_table=11 ##sequence-region NZ_NPOH01000022.1 1 90802 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000022.1 RefSeq region 1 90802 . + . ID=NZ_NPOH01000022.1:1..90802;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000022.1 RefSeq gene 234 779 . - . ID=gene-CCO46_RS21100;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=CCO46_RS21100;old_locus_tag=CCO46_21080 NZ_NPOH01000022.1 Protein Homology CDS 234 779 . - 0 ID=cds-WP_000853982.1;Parent=gene-CCO46_RS21100;Dbxref=GenBank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=CCO46_RS21100;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 791 2242 . - . ID=gene-CCO46_RS21105;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=CCO46_RS21105;old_locus_tag=CCO46_21085 NZ_NPOH01000022.1 Protein Homology CDS 791 2242 . - 0 ID=cds-WP_000545688.1;Parent=gene-CCO46_RS21105;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=CCO46_RS21105;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 2281 2895 . - . ID=gene-CCO46_RS21110;Name=CCO46_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21110;old_locus_tag=CCO46_21090 NZ_NPOH01000022.1 Protein Homology CDS 2281 2895 . - 0 ID=cds-WP_058331976.1;Parent=gene-CCO46_RS21110;Dbxref=GenBank:WP_058331976.1;Name=WP_058331976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=CCO46_RS21110;product=IMPACT family protein;protein_id=WP_058331976.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 2895 4226 . - . ID=gene-CCO46_RS21115;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=CCO46_RS21115;old_locus_tag=CCO46_21095 NZ_NPOH01000022.1 Protein Homology CDS 2895 4226 . - 0 ID=cds-WP_000444529.1;Parent=gene-CCO46_RS21115;Dbxref=GenBank:WP_000444529.1;Name=WP_000444529.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=CCO46_RS21115;product=Xaa-Pro dipeptidase;protein_id=WP_000444529.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 4416 6605 . + . ID=gene-CCO46_RS21120;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CCO46_RS21120;old_locus_tag=CCO46_21100 NZ_NPOH01000022.1 Protein Homology CDS 4416 6605 . + 0 ID=cds-WP_000966000.1;Parent=gene-CCO46_RS21120;Dbxref=GenBank:WP_000966000.1;Name=WP_000966000.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=CCO46_RS21120;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000966000.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 6615 7778 . + . ID=gene-CCO46_RS21125;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=CCO46_RS21125;old_locus_tag=CCO46_21105 NZ_NPOH01000022.1 Protein Homology CDS 6615 7778 . + 0 ID=cds-WP_000438778.1;Parent=gene-CCO46_RS21125;Dbxref=GenBank:WP_000438778.1;Name=WP_000438778.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=CCO46_RS21125;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438778.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 7975 9798 . - . ID=gene-CCO46_RS21130;Name=CCO46_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21130;old_locus_tag=CCO46_21110 NZ_NPOH01000022.1 Protein Homology CDS 7975 9798 . - 0 ID=cds-WP_000669887.1;Parent=gene-CCO46_RS21130;Dbxref=GenBank:WP_000669887.1;Name=WP_000669887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=CCO46_RS21130;product=aryl-sulfate sulfotransferase;protein_id=WP_000669887.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 10052 10753 . - . ID=gene-CCO46_RS21135;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=CCO46_RS21135;old_locus_tag=CCO46_21115 NZ_NPOH01000022.1 Protein Homology CDS 10052 10753 . - 0 ID=cds-WP_000209831.1;Parent=gene-CCO46_RS21135;Dbxref=GenBank:WP_000209831.1;Name=WP_000209831.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=CCO46_RS21135;product=NAD(P)H-flavin reductase;protein_id=WP_000209831.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 10839 12317 . - . ID=gene-CCO46_RS21140;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=CCO46_RS21140;old_locus_tag=CCO46_21120 NZ_NPOH01000022.1 Protein Homology CDS 10839 12317 . - 0 ID=cds-WP_097363506.1;Parent=gene-CCO46_RS21140;Dbxref=GenBank:WP_097363506.1;Name=WP_097363506.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=CCO46_RS21140;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_097363506.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 12503 12991 . + . ID=gene-CCO46_RS21145;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=CCO46_RS21145;old_locus_tag=CCO46_21125 NZ_NPOH01000022.1 Protein Homology CDS 12503 12991 . + 0 ID=cds-WP_001192410.1;Parent=gene-CCO46_RS21145;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=CCO46_RS21145;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 12999 13781 . - . ID=gene-CCO46_RS21150;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=CCO46_RS21150;old_locus_tag=CCO46_21130 NZ_NPOH01000022.1 Protein Homology CDS 12999 13781 . - 0 ID=cds-WP_000459645.1;Parent=gene-CCO46_RS21150;Dbxref=GenBank:WP_000459645.1;Name=WP_000459645.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=CCO46_RS21150;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459645.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 13823 14602 . - . ID=gene-CCO46_RS21155;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=CCO46_RS21155;old_locus_tag=CCO46_21135 NZ_NPOH01000022.1 Protein Homology CDS 13823 14602 . - 0 ID=cds-WP_000257554.1;Parent=gene-CCO46_RS21155;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=CCO46_RS21155;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 14605 15153 . - . ID=gene-CCO46_RS21160;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=CCO46_RS21160;old_locus_tag=CCO46_21140 NZ_NPOH01000022.1 Protein Homology CDS 14605 15153 . - 0 ID=cds-WP_000459612.1;Parent=gene-CCO46_RS21160;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=CCO46_RS21160;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 15157 15411 . - . ID=gene-CCO46_RS21165;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=CCO46_RS21165;old_locus_tag=CCO46_21145 NZ_NPOH01000022.1 Protein Homology CDS 15157 15411 . - 0 ID=cds-WP_000508972.1;Parent=gene-CCO46_RS21165;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=CCO46_RS21165;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 15617 17257 . - . ID=gene-CCO46_RS21170;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=CCO46_RS21170;old_locus_tag=CCO46_21150 NZ_NPOH01000022.1 Protein Homology CDS 15617 17257 . - 0 ID=cds-WP_000187559.1;Parent=gene-CCO46_RS21170;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=CCO46_RS21170;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 17254 17859 . - . ID=gene-CCO46_RS21175;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=CCO46_RS21175;old_locus_tag=CCO46_21155 NZ_NPOH01000022.1 Protein Homology CDS 17254 17859 . - 0 ID=cds-WP_001116093.1;Parent=gene-CCO46_RS21175;Dbxref=GenBank:WP_001116093.1;Name=WP_001116093.1;Ontology_term=GO:0032150;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process from chorismate|0032150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=CCO46_RS21175;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116093.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 17869 18624 . - . ID=gene-CCO46_RS21180;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=CCO46_RS21180;old_locus_tag=CCO46_21160 NZ_NPOH01000022.1 Protein Homology CDS 17869 18624 . - 0 ID=cds-WP_000229009.1;Parent=gene-CCO46_RS21180;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=CCO46_RS21180;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 18720 20150 . - . ID=gene-CCO46_RS21185;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=CCO46_RS21185;old_locus_tag=CCO46_21165 NZ_NPOH01000022.1 Protein Homology CDS 18720 20150 . - 0 ID=cds-WP_000355562.1;Parent=gene-CCO46_RS21185;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=CCO46_RS21185;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 20290 21051 . - . ID=gene-CCO46_RS21190;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=CCO46_RS21190;old_locus_tag=CCO46_21170 NZ_NPOH01000022.1 Protein Homology CDS 20290 21051 . - 0 ID=cds-WP_000045169.1;Parent=gene-CCO46_RS21190;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=CCO46_RS21190;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 21310 22122 . + . ID=gene-CCO46_RS21195;Name=CCO46_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21195;old_locus_tag=CCO46_21175 NZ_NPOH01000022.1 Protein Homology CDS 21310 22122 . + 0 ID=cds-WP_000213957.1;Parent=gene-CCO46_RS21195;Dbxref=GenBank:WP_000213957.1;Name=WP_000213957.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=CCO46_RS21195;product=dienelactone hydrolase family protein;protein_id=WP_000213957.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 22202 23545 . - . ID=gene-CCO46_RS21200;Name=CCO46_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21200;old_locus_tag=CCO46_21180 NZ_NPOH01000022.1 Protein Homology CDS 22202 23545 . - 0 ID=cds-WP_021294455.1;Parent=gene-CCO46_RS21200;Dbxref=GenBank:WP_021294455.1;Name=WP_021294455.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=CCO46_RS21200;product=anaerobic sulfatase maturase;protein_id=WP_021294455.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 23880 26144 . - . ID=gene-CCO46_RS21205;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CCO46_RS21205;old_locus_tag=CCO46_21185 NZ_NPOH01000022.1 Protein Homology CDS 23880 26144 . - 0 ID=cds-WP_000154185.1;Parent=gene-CCO46_RS21205;Dbxref=GenBank:WP_000154185.1;Name=WP_000154185.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=CCO46_RS21205;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154185.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 26393 27346 . + . ID=gene-CCO46_RS21210;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=CCO46_RS21210;old_locus_tag=CCO46_21190 NZ_NPOH01000022.1 Protein Homology CDS 26393 27346 . + 0 ID=cds-WP_000569786.1;Parent=gene-CCO46_RS21210;Dbxref=GenBank:WP_000569786.1;Name=WP_000569786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=CCO46_RS21210;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 27234 28133 . - . ID=gene-CCO46_RS21215;Name=CCO46_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21215;old_locus_tag=CCO46_21195 NZ_NPOH01000022.1 Protein Homology CDS 27234 28133 . - 0 ID=cds-WP_001196257.1;Parent=gene-CCO46_RS21215;Dbxref=GenBank:WP_001196257.1;Name=WP_001196257.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=CCO46_RS21215;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196257.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 28214 29014 . - . ID=gene-CCO46_RS21220;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=CCO46_RS21220;old_locus_tag=CCO46_21200 NZ_NPOH01000022.1 Protein Homology CDS 28214 29014 . - 0 ID=cds-WP_000285338.1;Parent=gene-CCO46_RS21220;Dbxref=GenBank:WP_000285338.1;Name=WP_000285338.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=CCO46_RS21220;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285338.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 29030 30046 . - . ID=gene-CCO46_RS21225;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=CCO46_RS21225;old_locus_tag=CCO46_21205 NZ_NPOH01000022.1 Protein Homology CDS 29030 30046 . - 0 ID=cds-WP_000487685.1;Parent=gene-CCO46_RS21225;Dbxref=GenBank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=CCO46_RS21225;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 30157 30777 . + . ID=gene-CCO46_RS21230;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=CCO46_RS21230;old_locus_tag=CCO46_21210 NZ_NPOH01000022.1 Protein Homology CDS 30157 30777 . + 0 ID=cds-WP_000142523.1;Parent=gene-CCO46_RS21230;Dbxref=GenBank:WP_000142523.1;Name=WP_000142523.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=CCO46_RS21230;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142523.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 30817 31437 . - . ID=gene-CCO46_RS21235;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=CCO46_RS21235;old_locus_tag=CCO46_21215 NZ_NPOH01000022.1 Protein Homology CDS 30817 31437 . - 0 ID=cds-WP_000980080.1;Parent=gene-CCO46_RS21235;Dbxref=GenBank:WP_000980080.1;Name=WP_000980080.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=CCO46_RS21235;product=threonine export protein RhtC;protein_id=WP_000980080.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 31501 33330 . - . ID=gene-CCO46_RS21240;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CCO46_RS21240;old_locus_tag=CCO46_21220 NZ_NPOH01000022.1 Protein Homology CDS 31501 33330 . - 0 ID=cds-WP_001664819.1;Parent=gene-CCO46_RS21240;Dbxref=GenBank:WP_001664819.1;Name=WP_001664819.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=CCO46_RS21240;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001664819.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 33414 34283 . - . ID=gene-CCO46_RS21245;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=CCO46_RS21245;old_locus_tag=CCO46_21225 NZ_NPOH01000022.1 Protein Homology CDS 33414 34283 . - 0 ID=cds-WP_001201692.1;Parent=gene-CCO46_RS21245;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=CCO46_RS21245;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 34448 34915 . + . ID=gene-CCO46_RS21250;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=CCO46_RS21250;old_locus_tag=CCO46_21230 NZ_NPOH01000022.1 Protein Homology CDS 34448 34915 . + 0 ID=cds-WP_001277136.1;Parent=gene-CCO46_RS21250;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=CCO46_RS21250;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 34959 35846 . + . ID=gene-CCO46_RS21255;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO46_RS21255;old_locus_tag=CCO46_21235 NZ_NPOH01000022.1 Protein Homology CDS 34959 35846 . + 0 ID=cds-WP_001631499.1;Parent=gene-CCO46_RS21255;Dbxref=GenBank:WP_001631499.1;Name=WP_001631499.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=CCO46_RS21255;product=EamA family transporter RarD;protein_id=WP_001631499.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 35886 36182 . - . ID=gene-CCO46_RS21260;Name=CCO46_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21260;old_locus_tag=CCO46_21240 NZ_NPOH01000022.1 Protein Homology CDS 35886 36182 . - 0 ID=cds-WP_001156607.1;Parent=gene-CCO46_RS21260;Dbxref=GenBank:WP_001156607.1;Name=WP_001156607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=CCO46_RS21260;product=hypothetical protein;protein_id=WP_001156607.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 36357 36737 . + . ID=gene-CCO46_RS21265;Name=CCO46_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21265;old_locus_tag=CCO46_21245 NZ_NPOH01000022.1 Protein Homology CDS 36357 36737 . + 0 ID=cds-WP_023139942.1;Parent=gene-CCO46_RS21265;Dbxref=GenBank:WP_023139942.1;Name=WP_023139942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727015.1;locus_tag=CCO46_RS21265;product=hypothetical protein;protein_id=WP_023139942.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 36785 37735 . - . ID=gene-CCO46_RS21270;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=CCO46_RS21270;old_locus_tag=CCO46_21250 NZ_NPOH01000022.1 Protein Homology CDS 36785 37735 . - 0 ID=cds-WP_000947139.1;Parent=gene-CCO46_RS21270;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=CCO46_RS21270;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 37891 37947 . - . ID=gene-CCO46_RS25580;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=CCO46_RS25580 NZ_NPOH01000022.1 Protein Homology CDS 37891 37947 . - 0 ID=cds-WP_212723238.1;Parent=gene-CCO46_RS25580;Dbxref=GenBank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=CCO46_RS25580;product=YsgD/CorL family protein;protein_id=WP_212723238.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 38207 40369 . - . ID=gene-CCO46_RS21280;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=CCO46_RS21280;old_locus_tag=CCO46_21260 NZ_NPOH01000022.1 Protein Homology CDS 38207 40369 . - 0 ID=cds-WP_053510988.1;Parent=gene-CCO46_RS21280;Dbxref=GenBank:WP_053510988.1;Name=WP_053510988.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=CCO46_RS21280;product=DNA helicase II;protein_id=WP_053510988.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 40505 41221 . - . ID=gene-CCO46_RS21285;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=CCO46_RS21285;old_locus_tag=CCO46_21265 NZ_NPOH01000022.1 Protein Homology CDS 40505 41221 . - 0 ID=cds-WP_001213560.1;Parent=gene-CCO46_RS21285;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=CCO46_RS21285;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 41221 42123 . - . ID=gene-CCO46_RS21290;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CCO46_RS21290;old_locus_tag=CCO46_21270 NZ_NPOH01000022.1 Protein Homology CDS 41221 42123 . - 0 ID=cds-WP_000132877.1;Parent=gene-CCO46_RS21290;Dbxref=GenBank:WP_000132877.1;Name=WP_000132877.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=CCO46_RS21290;product=tyrosine recombinase XerC;protein_id=WP_000132877.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 42120 42827 . - . ID=gene-CCO46_RS21295;Name=CCO46_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21295;old_locus_tag=CCO46_21275 NZ_NPOH01000022.1 Protein Homology CDS 42120 42827 . - 0 ID=cds-WP_000812763.1;Parent=gene-CCO46_RS21295;Dbxref=GenBank:WP_000812763.1;Name=WP_000812763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=CCO46_RS21295;product=DUF484 domain-containing protein;protein_id=WP_000812763.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 42824 43648 . - . ID=gene-CCO46_RS21300;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=CCO46_RS21300;old_locus_tag=CCO46_21280 NZ_NPOH01000022.1 Protein Homology CDS 42824 43648 . - 0 ID=cds-WP_001160671.1;Parent=gene-CCO46_RS21300;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=CCO46_RS21300;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 43685 43888 . - . ID=gene-CCO46_RS21305;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=CCO46_RS21305;old_locus_tag=CCO46_21285 NZ_NPOH01000022.1 Protein Homology CDS 43685 43888 . - 0 ID=cds-WP_000799903.1;Parent=gene-CCO46_RS21305;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=CCO46_RS21305;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 44074 44325 . + . ID=gene-CCO46_RS25235;Name=CCO46_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25235;old_locus_tag=CCO46_21290 NZ_NPOH01000022.1 GeneMarkS-2+ CDS 44074 44325 . + 0 ID=cds-WP_001583668.1;Parent=gene-CCO46_RS25235;Dbxref=GenBank:WP_001583668.1;Name=WP_001583668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25235;product=hypothetical protein;protein_id=WP_001583668.1;transl_table=11 NZ_NPOH01000022.1 RefSeq pseudogene 44295 44597 . + . ID=gene-CCO46_RS25040;Name=CCO46_RS25040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25040;old_locus_tag=CCO46_21295;partial=true;pseudo=true;start_range=.,44295 NZ_NPOH01000022.1 Protein Homology CDS 44295 44597 . + 0 ID=cds-CCO46_RS25040;Parent=gene-CCO46_RS25040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=CCO46_RS25040;partial=true;product=hypothetical protein;pseudo=true;start_range=.,44295;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 44585 44974 . + . ID=gene-CCO46_RS21320;Name=CCO46_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21320;old_locus_tag=CCO46_21300 NZ_NPOH01000022.1 Protein Homology CDS 44585 44974 . + 0 ID=cds-WP_001125568.1;Parent=gene-CCO46_RS21320;Dbxref=GenBank:WP_001125568.1;Name=WP_001125568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=CCO46_RS21320;product=DUF3021 family protein;protein_id=WP_001125568.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 45044 45364 . + . ID=gene-CCO46_RS21325;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=CCO46_RS21325;old_locus_tag=CCO46_21305 NZ_NPOH01000022.1 Protein Homology CDS 45044 45364 . + 0 ID=cds-WP_001651119.1;Parent=gene-CCO46_RS21325;Dbxref=GenBank:WP_001651119.1;Name=WP_001651119.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=CCO46_RS21325;product=iron donor protein CyaY;protein_id=WP_001651119.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 45435 45797 . - . ID=gene-CCO46_RS21330;Name=CCO46_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21330;old_locus_tag=CCO46_21310 NZ_NPOH01000022.1 Protein Homology CDS 45435 45797 . - 0 ID=cds-WP_001641751.1;Parent=gene-CCO46_RS21330;Dbxref=GenBank:WP_001641751.1;Name=WP_001641751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462828.1;locus_tag=CCO46_RS21330;product=hypothetical protein;protein_id=WP_001641751.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 45809 46351 . - . ID=gene-CCO46_RS21335;Name=CCO46_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21335;old_locus_tag=CCO46_21315 NZ_NPOH01000022.1 Protein Homology CDS 45809 46351 . - 0 ID=cds-WP_001727010.1;Parent=gene-CCO46_RS21335;Dbxref=GenBank:WP_001727010.1;Name=WP_001727010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462827.1;locus_tag=CCO46_RS21335;product=STM3941 family protein;protein_id=WP_001727010.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 46537 46890 . - . ID=gene-CCO46_RS21340;Name=CCO46_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21340;old_locus_tag=CCO46_21320 NZ_NPOH01000022.1 Protein Homology CDS 46537 46890 . - 0 ID=cds-WP_023242914.1;Parent=gene-CCO46_RS21340;Dbxref=GenBank:WP_023242914.1;Name=WP_023242914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462826.1;locus_tag=CCO46_RS21340;product=hypothetical protein;protein_id=WP_023242914.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 46998 49544 . - . ID=gene-CCO46_RS21345;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=CCO46_RS21345;old_locus_tag=CCO46_21325 NZ_NPOH01000022.1 Protein Homology CDS 46998 49544 . - 0 ID=cds-WP_000281718.1;Parent=gene-CCO46_RS21345;Dbxref=GenBank:WP_000281718.1;Name=WP_000281718.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=CCO46_RS21345;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 49921 50862 . + . ID=gene-CCO46_RS21350;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CCO46_RS21350;old_locus_tag=CCO46_21330 NZ_NPOH01000022.1 Protein Homology CDS 49921 50862 . + 0 ID=cds-WP_001521319.1;Parent=gene-CCO46_RS21350;Dbxref=GenBank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=CCO46_RS21350;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 50859 51599 . + . ID=gene-CCO46_RS21355;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=CCO46_RS21355;old_locus_tag=CCO46_21335 NZ_NPOH01000022.1 Protein Homology CDS 50859 51599 . + 0 ID=cds-WP_000025494.1;Parent=gene-CCO46_RS21355;Dbxref=GenBank:WP_000025494.1;Name=WP_000025494.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=CCO46_RS21355;product=uroporphyrinogen-III synthase;protein_id=WP_000025494.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 51621 52790 . + . ID=gene-CCO46_RS21360;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=CCO46_RS21360;old_locus_tag=CCO46_21340 NZ_NPOH01000022.1 Protein Homology CDS 51621 52790 . + 0 ID=cds-WP_000138961.1;Parent=gene-CCO46_RS21360;Dbxref=GenBank:WP_000138961.1;Name=WP_000138961.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=CCO46_RS21360;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138961.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 52793 53989 . + . ID=gene-CCO46_RS21365;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CCO46_RS21365;old_locus_tag=CCO46_21345 NZ_NPOH01000022.1 Protein Homology CDS 52793 53989 . + 0 ID=cds-WP_001546072.1;Parent=gene-CCO46_RS21365;Dbxref=GenBank:WP_001546072.1;Name=WP_001546072.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=CCO46_RS21365;product=protoheme IX biogenesis protein HemY;protein_id=WP_001546072.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 54570 54646 . - . ID=gene-CCO46_RS21370;Name=CCO46_RS21370;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS21370;old_locus_tag=CCO46_21350 NZ_NPOH01000022.1 tRNAscan-SE tRNA 54570 54646 . - . ID=rna-CCO46_RS21370;Parent=gene-CCO46_RS21370;anticodon=(pos:complement(54610..54612));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21370;product=tRNA-Pro NZ_NPOH01000022.1 tRNAscan-SE exon 54570 54646 . - . ID=exon-CCO46_RS21370-1;Parent=rna-CCO46_RS21370;anticodon=(pos:complement(54610..54612));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21370;product=tRNA-Pro NZ_NPOH01000022.1 RefSeq gene 54689 54775 . - . ID=gene-CCO46_RS21375;Name=CCO46_RS21375;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS21375;old_locus_tag=CCO46_21355 NZ_NPOH01000022.1 tRNAscan-SE tRNA 54689 54775 . - . ID=rna-CCO46_RS21375;Parent=gene-CCO46_RS21375;anticodon=(pos:complement(54739..54741));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21375;product=tRNA-Leu NZ_NPOH01000022.1 tRNAscan-SE exon 54689 54775 . - . ID=exon-CCO46_RS21375-1;Parent=rna-CCO46_RS21375;anticodon=(pos:complement(54739..54741));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21375;product=tRNA-Leu NZ_NPOH01000022.1 RefSeq gene 54796 54871 . - . ID=gene-CCO46_RS21380;Name=CCO46_RS21380;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS21380;old_locus_tag=CCO46_21360 NZ_NPOH01000022.1 tRNAscan-SE tRNA 54796 54871 . - . ID=rna-CCO46_RS21380;Parent=gene-CCO46_RS21380;anticodon=(pos:complement(54836..54838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21380;product=tRNA-His NZ_NPOH01000022.1 tRNAscan-SE exon 54796 54871 . - . ID=exon-CCO46_RS21380-1;Parent=rna-CCO46_RS21380;anticodon=(pos:complement(54836..54838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21380;product=tRNA-His NZ_NPOH01000022.1 RefSeq gene 54926 55002 . - . ID=gene-CCO46_RS21385;Name=CCO46_RS21385;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS21385;old_locus_tag=CCO46_21365 NZ_NPOH01000022.1 tRNAscan-SE tRNA 54926 55002 . - . ID=rna-CCO46_RS21385;Parent=gene-CCO46_RS21385;anticodon=(pos:complement(54966..54968));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21385;product=tRNA-Arg NZ_NPOH01000022.1 tRNAscan-SE exon 54926 55002 . - . ID=exon-CCO46_RS21385-1;Parent=rna-CCO46_RS21385;anticodon=(pos:complement(54966..54968));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21385;product=tRNA-Arg NZ_NPOH01000022.1 RefSeq gene 55105 56490 . - . ID=gene-CCO46_RS21390;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=CCO46_RS21390;old_locus_tag=CCO46_21370 NZ_NPOH01000022.1 Protein Homology CDS 55105 56490 . - 0 ID=cds-WP_000818378.1;Parent=gene-CCO46_RS21390;Dbxref=GenBank:WP_000818378.1;Name=WP_000818378.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=CCO46_RS21390;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818378.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 56697 57437 . - . ID=gene-CCO46_RS21395;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=CCO46_RS21395;old_locus_tag=CCO46_21375 NZ_NPOH01000022.1 Protein Homology CDS 56697 57437 . - 0 ID=cds-WP_000183620.1;Parent=gene-CCO46_RS21395;Dbxref=GenBank:WP_000183620.1;Name=WP_000183620.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=CCO46_RS21395;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183620.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 57434 58792 . - . ID=gene-CCO46_RS21400;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=CCO46_RS21400;old_locus_tag=CCO46_21380 NZ_NPOH01000022.1 Protein Homology CDS 57434 58792 . - 0 ID=cds-WP_000055605.1;Parent=gene-CCO46_RS21400;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=CCO46_RS21400;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 58789 59868 . - . ID=gene-CCO46_RS21405;Name=CCO46_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21405;old_locus_tag=CCO46_21385 NZ_NPOH01000022.1 Protein Homology CDS 58789 59868 . - 0 ID=cds-WP_058331969.1;Parent=gene-CCO46_RS21405;Dbxref=GenBank:WP_058331969.1;Name=WP_058331969.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=CCO46_RS21405;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_058331969.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 59865 61115 . - . ID=gene-CCO46_RS21410;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=CCO46_RS21410;old_locus_tag=CCO46_21390 NZ_NPOH01000022.1 Protein Homology CDS 59865 61115 . - 0 ID=cds-WP_000050291.1;Parent=gene-CCO46_RS21410;Dbxref=GenBank:WP_000050291.1;Name=WP_000050291.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=CCO46_RS21410;product=lipid III flippase WzxE;protein_id=WP_000050291.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 61117 62247 . - . ID=gene-CCO46_RS21415;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=CCO46_RS21415;old_locus_tag=CCO46_21395 NZ_NPOH01000022.1 Protein Homology CDS 61117 62247 . - 0 ID=cds-WP_000612080.1;Parent=gene-CCO46_RS21415;Dbxref=GenBank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=CCO46_RS21415;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 62252 62929 . - . ID=gene-CCO46_RS21420;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=CCO46_RS21420;old_locus_tag=CCO46_21400 NZ_NPOH01000022.1 Protein Homology CDS 62252 62929 . - 0 ID=cds-WP_001145158.1;Parent=gene-CCO46_RS21420;Dbxref=GenBank:WP_001145158.1;Name=WP_001145158.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=CCO46_RS21420;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145158.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 62907 63221 . - . ID=gene-CCO46_RS25680;Name=CCO46_RS25680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25680;old_locus_tag=CCO46_21405 NZ_NPOH01000022.1 Protein Homology CDS 62907 63221 . - 0 ID=cds-WP_223195389.1;Parent=gene-CCO46_RS25680;Dbxref=GenBank:WP_223195389.1;Name=WP_223195389.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=CCO46_RS25680;product=sugar phosphate nucleotidyltransferase;protein_id=WP_223195389.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 63164 64231 . - . ID=gene-CCO46_RS21430;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=CCO46_RS21430;old_locus_tag=CCO46_21410 NZ_NPOH01000022.1 Protein Homology CDS 63164 64231 . - 0 ID=cds-WP_000822143.1;Parent=gene-CCO46_RS21430;Dbxref=GenBank:WP_000822143.1;Name=WP_000822143.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=CCO46_RS21430;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822143.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 64231 65493 . - . ID=gene-CCO46_RS21435;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=CCO46_RS21435;old_locus_tag=CCO46_21415 NZ_NPOH01000022.1 Protein Homology CDS 64231 65493 . - 0 ID=cds-WP_080160479.1;Parent=gene-CCO46_RS21435;Dbxref=GenBank:WP_080160479.1;Name=WP_080160479.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=CCO46_RS21435;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_080160479.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 65490 66620 . - . ID=gene-CCO46_RS21440;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CCO46_RS21440;old_locus_tag=CCO46_21420 NZ_NPOH01000022.1 Protein Homology CDS 65490 66620 . - 0 ID=cds-WP_000866685.1;Parent=gene-CCO46_RS21440;Dbxref=GenBank:WP_000866685.1;Name=WP_000866685.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=CCO46_RS21440;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866685.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 66676 67722 . - . ID=gene-CCO46_RS21445;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=CCO46_RS21445;old_locus_tag=CCO46_21425 NZ_NPOH01000022.1 Protein Homology CDS 66676 67722 . - 0 ID=cds-WP_000193413.1;Parent=gene-CCO46_RS21445;Dbxref=GenBank:WP_000193413.1;Name=WP_000193413.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=CCO46_RS21445;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193413.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 67734 68837 . - . ID=gene-CCO46_RS21450;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=CCO46_RS21450;old_locus_tag=CCO46_21430 NZ_NPOH01000022.1 Protein Homology CDS 67734 68837 . - 0 ID=cds-WP_000771937.1;Parent=gene-CCO46_RS21450;Dbxref=GenBank:WP_000771937.1;Name=WP_000771937.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=CCO46_RS21450;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771937.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 69067 70326 . - . ID=gene-CCO46_RS21455;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CCO46_RS21455;old_locus_tag=CCO46_21435 NZ_NPOH01000022.1 Protein Homology CDS 69067 70326 . - 0 ID=cds-WP_001054532.1;Parent=gene-CCO46_RS21455;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=CCO46_RS21455;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 70414 70497 . - . ID=gene-CCO46_RS25590;Name=CCO46_RS25590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25590 NZ_NPOH01000022.1 Protein Homology CDS 70414 70497 . - 0 ID=cds-WP_134820045.1;Parent=gene-CCO46_RS25590;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=CCO46_RS25590;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 70745 71074 . - . ID=gene-CCO46_RS21460;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CCO46_RS21460;old_locus_tag=CCO46_21440 NZ_NPOH01000022.1 Protein Homology CDS 70745 71074 . - 0 ID=cds-WP_001280776.1;Parent=gene-CCO46_RS21460;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=CCO46_RS21460;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 71218 72483 . + . ID=gene-CCO46_RS21465;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=CCO46_RS21465;old_locus_tag=CCO46_21445 NZ_NPOH01000022.1 Protein Homology CDS 71218 72483 . + 0 ID=cds-WP_000047525.1;Parent=gene-CCO46_RS21465;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=CCO46_RS21465;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 72602 74083 . + . ID=gene-CCO46_RS21470;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=CCO46_RS21470;old_locus_tag=CCO46_21450 NZ_NPOH01000022.1 Protein Homology CDS 72602 74083 . + 0 ID=cds-WP_001089451.1;Parent=gene-CCO46_RS21470;Dbxref=GenBank:WP_001089451.1;Name=WP_001089451.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=CCO46_RS21470;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089451.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 74123 76147 . - . ID=gene-CCO46_RS21475;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=CCO46_RS21475;old_locus_tag=CCO46_21455 NZ_NPOH01000022.1 Protein Homology CDS 74123 76147 . - 0 ID=cds-WP_094887823.1;Parent=gene-CCO46_RS21475;Dbxref=GenBank:WP_094887823.1;Name=WP_094887823.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=CCO46_RS21475;product=DNA helicase Rep;protein_id=WP_094887823.1;transl_table=11 NZ_NPOH01000022.1 RefSeq pseudogene 76247 76384 . - . ID=gene-CCO46_RS21480;Name=CCO46_RS21480;end_range=76384,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS21480;old_locus_tag=CCO46_21460;partial=true;pseudo=true NZ_NPOH01000022.1 Protein Homology CDS 76247 76384 . - 0 ID=cds-CCO46_RS21480;Parent=gene-CCO46_RS21480;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=76384,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=CCO46_RS21480;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 NZ_NPOH01000022.1 RefSeq pseudogene 76336 76491 . - . ID=gene-CCO46_RS25760;Name=CCO46_RS25760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25760;partial=true;pseudo=true;start_range=.,76336 NZ_NPOH01000022.1 Protein Homology CDS 76336 76491 . - 0 ID=cds-CCO46_RS25760;Parent=gene-CCO46_RS25760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=CCO46_RS25760;partial=true;product=Crp/Fnr family transcriptional regulator;pseudo=true;start_range=.,76336;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 76685 76966 . + . ID=gene-CCO46_RS21490;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=CCO46_RS21490;old_locus_tag=CCO46_21470 NZ_NPOH01000022.1 Protein Homology CDS 76685 76966 . + 0 ID=cds-WP_001096806.1;Parent=gene-CCO46_RS21490;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=CCO46_RS21490;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 77058 78533 . - . ID=gene-CCO46_RS21495;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CCO46_RS21495;old_locus_tag=CCO46_21475 NZ_NPOH01000022.1 Protein Homology CDS 77058 78533 . - 0 ID=cds-WP_000024943.1;Parent=gene-CCO46_RS21495;Dbxref=GenBank:WP_000024943.1;Name=WP_000024943.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=CCO46_RS21495;product=ketol-acid reductoisomerase;protein_id=WP_000024943.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 78697 79584 . + . ID=gene-CCO46_RS21500;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=CCO46_RS21500;old_locus_tag=CCO46_21480 NZ_NPOH01000022.1 Protein Homology CDS 78697 79584 . + 0 ID=cds-WP_000365798.1;Parent=gene-CCO46_RS21500;Dbxref=GenBank:WP_000365798.1;Name=WP_000365798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=CCO46_RS21500;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365798.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 79587 79928 . - . ID=gene-CCO46_RS21505;Name=CCO46_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21505;old_locus_tag=CCO46_21485 NZ_NPOH01000022.1 Protein Homology CDS 79587 79928 . - 0 ID=cds-WP_000560822.1;Parent=gene-CCO46_RS21505;Dbxref=GenBank:WP_000560822.1;Name=WP_000560822.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=CCO46_RS21505;product=helix-turn-helix domain-containing protein;protein_id=WP_000560822.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 79925 80242 . - . ID=gene-CCO46_RS21510;Name=CCO46_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21510;old_locus_tag=CCO46_21490 NZ_NPOH01000022.1 Protein Homology CDS 79925 80242 . - 0 ID=cds-WP_000535852.1;Parent=gene-CCO46_RS21510;Dbxref=GenBank:WP_000535852.1;Name=WP_000535852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=CCO46_RS21510;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000535852.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 80525 82069 . - . ID=gene-CCO46_RS21515;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CCO46_RS21515;old_locus_tag=CCO46_21495 NZ_NPOH01000022.1 Protein Homology CDS 80525 82069 . - 0 ID=cds-WP_001518457.1;Parent=gene-CCO46_RS21515;Dbxref=GenBank:WP_001518457.1;Name=WP_001518457.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=CCO46_RS21515;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001518457.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 82072 83922 . - . ID=gene-CCO46_RS21520;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CCO46_RS21520;old_locus_tag=CCO46_21500 NZ_NPOH01000022.1 Protein Homology CDS 82072 83922 . - 0 ID=cds-WP_039591110.1;Parent=gene-CCO46_RS21520;Dbxref=GenBank:WP_039591110.1;Name=WP_039591110.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=CCO46_RS21520;product=dihydroxy-acid dehydratase;protein_id=WP_039591110.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 84082 85011 . - . ID=gene-CCO46_RS21525;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=CCO46_RS21525;old_locus_tag=CCO46_21505 NZ_NPOH01000022.1 Protein Homology CDS 84082 85011 . - 0 ID=cds-WP_000208532.1;Parent=gene-CCO46_RS21525;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=CCO46_RS21525;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 85029 85292 . - . ID=gene-CCO46_RS21530;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=CCO46_RS21530;old_locus_tag=CCO46_21510 NZ_NPOH01000022.1 Protein Homology CDS 85029 85292 . - 0 ID=cds-WP_000983260.1;Parent=gene-CCO46_RS21530;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=CCO46_RS21530;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 85289 86935 . - . ID=gene-CCO46_RS21535;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=CCO46_RS21535;old_locus_tag=CCO46_21515 NZ_NPOH01000022.1 Protein Homology CDS 85289 86935 . - 0 ID=cds-WP_001012555.1;Parent=gene-CCO46_RS21535;Dbxref=GenBank:WP_001012555.1;Name=WP_001012555.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=CCO46_RS21535;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012555.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 86938 86988 . - . ID=gene-CCO46_RS25320;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=CCO46_RS25320 NZ_NPOH01000022.1 Protein Homology CDS 86938 86988 . - 0 ID=cds-WP_192930503.1;Parent=gene-CCO46_RS25320;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=CCO46_RS25320;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 87075 87173 . - . ID=gene-CCO46_RS21540;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=CCO46_RS21540;old_locus_tag=CCO46_21520 NZ_NPOH01000022.1 Protein Homology CDS 87075 87173 . - 0 ID=cds-WP_001311244.1;Parent=gene-CCO46_RS21540;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=CCO46_RS21540;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 87525 89045 . + . ID=gene-CCO46_RS21550;Name=CCO46_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21550;old_locus_tag=CCO46_21530 NZ_NPOH01000022.1 Protein Homology CDS 87525 89045 . + 0 ID=cds-WP_000050215.1;Parent=gene-CCO46_RS21550;Dbxref=GenBank:WP_000050215.1;Name=WP_000050215.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=CCO46_RS21550;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000050215.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 89070 89408 . - . ID=gene-CCO46_RS21555;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=CCO46_RS21555;old_locus_tag=CCO46_21535 NZ_NPOH01000022.1 Protein Homology CDS 89070 89408 . - 0 ID=cds-WP_000840996.1;Parent=gene-CCO46_RS21555;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=CCO46_RS21555;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 89515 90363 . + . ID=gene-CCO46_RS21560;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=CCO46_RS21560;old_locus_tag=CCO46_21540 NZ_NPOH01000022.1 Protein Homology CDS 89515 90363 . + 0 ID=cds-WP_001541181.1;Parent=gene-CCO46_RS21560;Dbxref=GenBank:WP_001541181.1;Name=WP_001541181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=CCO46_RS21560;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11 NZ_NPOH01000022.1 RefSeq gene 90465 90540 . - . ID=gene-CCO46_RS21565;Name=CCO46_RS21565;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS21565;old_locus_tag=CCO46_21545 NZ_NPOH01000022.1 tRNAscan-SE tRNA 90465 90540 . - . ID=rna-CCO46_RS21565;Parent=gene-CCO46_RS21565;anticodon=(pos:complement(90505..90507));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21565;product=tRNA-Trp NZ_NPOH01000022.1 tRNAscan-SE exon 90465 90540 . - . ID=exon-CCO46_RS21565-1;Parent=rna-CCO46_RS21565;anticodon=(pos:complement(90505..90507));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21565;product=tRNA-Trp NZ_NPOH01000022.1 RefSeq gene 90549 90625 . - . ID=gene-CCO46_RS21570;Name=CCO46_RS21570;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS21570;old_locus_tag=CCO46_21550 NZ_NPOH01000022.1 tRNAscan-SE tRNA 90549 90625 . - . ID=rna-CCO46_RS21570;Parent=gene-CCO46_RS21570;anticodon=(pos:complement(90589..90591));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21570;product=tRNA-Asp NZ_NPOH01000022.1 tRNAscan-SE exon 90549 90625 . - . ID=exon-CCO46_RS21570-1;Parent=rna-CCO46_RS21570;anticodon=(pos:complement(90589..90591));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS21570;product=tRNA-Asp NZ_NPOH01000022.1 RefSeq gene 90680 90795 . - . ID=gene-CCO46_RS21575;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO46_RS21575;old_locus_tag=CCO46_21555 NZ_NPOH01000022.1 cmsearch rRNA 90680 90795 . - . ID=rna-CCO46_RS21575;Parent=gene-CCO46_RS21575;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS21575;product=5S ribosomal RNA NZ_NPOH01000022.1 cmsearch exon 90680 90795 . - . ID=exon-CCO46_RS21575-1;Parent=rna-CCO46_RS21575;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS21575;product=5S ribosomal RNA ##sequence-region NZ_NPOH01000023.1 1 72285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000023.1 RefSeq region 1 72285 . + . ID=NZ_NPOH01000023.1:1..72285;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000023.1 RefSeq gene 281 706 . + . ID=gene-CCO46_RS21585;Name=CCO46_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21585;old_locus_tag=CCO46_21565 NZ_NPOH01000023.1 Protein Homology CDS 281 706 . + 0 ID=cds-WP_001198928.1;Parent=gene-CCO46_RS21585;Dbxref=GenBank:WP_001198928.1;Name=WP_001198928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=CCO46_RS21585;product=antirestriction protein;protein_id=WP_001198928.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 753 1175 . + . ID=gene-CCO46_RS21590;Name=CCO46_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21590;old_locus_tag=CCO46_21570 NZ_NPOH01000023.1 Protein Homology CDS 753 1175 . + 0 ID=cds-WP_000271725.1;Parent=gene-CCO46_RS21590;Dbxref=GenBank:WP_000271725.1;Name=WP_000271725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=CCO46_RS21590;product=DUF1380 family protein;protein_id=WP_000271725.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 1172 1363 . + . ID=gene-CCO46_RS21595;Name=CCO46_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21595;old_locus_tag=CCO46_21575 NZ_NPOH01000023.1 Protein Homology CDS 1172 1363 . + 0 ID=cds-WP_001027500.1;Parent=gene-CCO46_RS21595;Dbxref=GenBank:WP_001027500.1;Name=WP_001027500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=CCO46_RS21595;product=hypothetical protein;protein_id=WP_001027500.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 1434 1781 . + . ID=gene-CCO46_RS25915;Name=CCO46_RS25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25915 NZ_NPOH01000023.1 GeneMarkS-2+ CDS 1434 1781 . + 0 ID=cds-WP_001303314.1;Parent=gene-CCO46_RS25915;Dbxref=GenBank:WP_001303314.1;Name=WP_001303314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25915;product=hypothetical protein;protein_id=WP_001303314.1;transl_table=11 NZ_NPOH01000023.1 RefSeq pseudogene 1696 1905 . - . ID=gene-CCO46_RS25920;Name=CCO46_RS25920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25920;partial=true;pseudo=true;start_range=.,1696 NZ_NPOH01000023.1 Protein Homology CDS 1696 1905 . - 0 ID=cds-CCO46_RS25920;Parent=gene-CCO46_RS25920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001304227.1;locus_tag=CCO46_RS25920;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1696;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 2133 2660 . + . ID=gene-CCO46_RS21605;Name=CCO46_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21605;old_locus_tag=CCO46_21590 NZ_NPOH01000023.1 Protein Homology CDS 2133 2660 . + 0 ID=cds-WP_001276116.1;Parent=gene-CCO46_RS21605;Dbxref=GenBank:WP_001276116.1;Name=WP_001276116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276102.1;locus_tag=CCO46_RS21605;product=single-stranded DNA-binding protein;protein_id=WP_001276116.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 2718 2951 . + . ID=gene-CCO46_RS21610;Name=CCO46_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21610;old_locus_tag=CCO46_21595 NZ_NPOH01000023.1 Protein Homology CDS 2718 2951 . + 0 ID=cds-WP_000006012.1;Parent=gene-CCO46_RS21610;Dbxref=GenBank:WP_000006012.1;Name=WP_000006012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=CCO46_RS21610;product=DUF905 family protein;protein_id=WP_000006012.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 3010 4968 . + . ID=gene-CCO46_RS21615;Name=CCO46_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21615;old_locus_tag=CCO46_21600 NZ_NPOH01000023.1 Protein Homology CDS 3010 4968 . + 0 ID=cds-WP_001145458.1;Parent=gene-CCO46_RS21615;Dbxref=GenBank:WP_001145458.1;Name=WP_001145458.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117326.1;locus_tag=CCO46_RS21615;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_001145458.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 5023 5457 . + . ID=gene-CCO46_RS21620;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=CCO46_RS21620;old_locus_tag=CCO46_21605 NZ_NPOH01000023.1 Protein Homology CDS 5023 5457 . + 0 ID=cds-WP_000845897.1;Parent=gene-CCO46_RS21620;Dbxref=GenBank:WP_000845897.1;Name=WP_000845897.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=CCO46_RS21620;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845897.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 5454 6173 . + . ID=gene-CCO46_RS21625;Name=CCO46_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21625;old_locus_tag=CCO46_21610 NZ_NPOH01000023.1 Protein Homology CDS 5454 6173 . + 0 ID=cds-WP_001276260.1;Parent=gene-CCO46_RS21625;Dbxref=GenBank:WP_001276260.1;Name=WP_001276260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723065.1;locus_tag=CCO46_RS21625;product=plasmid SOS inhibition protein A;protein_id=WP_001276260.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 6303 7478 . + . ID=gene-CCO46_RS21630;Name=CCO46_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21630;old_locus_tag=CCO46_21615 NZ_NPOH01000023.1 Protein Homology CDS 6303 7478 . + 0 ID=cds-WP_000942657.1;Parent=gene-CCO46_RS21630;Dbxref=GenBank:WP_000942657.1;Name=WP_000942657.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: protein motif:HMM:NF040570.1;locus_tag=CCO46_RS21630;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_000942657.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 7925 8425 . + . ID=gene-CCO46_RS25250;Name=CCO46_RS25250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25250 NZ_NPOH01000023.1 Protein Homology CDS 7925 8425 . + 0 ID=cds-WP_000117611.1;Parent=gene-CCO46_RS25250;Dbxref=GenBank:WP_000117611.1;Name=WP_000117611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117633.1;locus_tag=CCO46_RS25250;product=antirestriction protein ArdA;protein_id=WP_000117611.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 9154 9588 . + . ID=gene-CCO46_RS21650;Name=CCO46_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21650;old_locus_tag=CCO46_21635 NZ_NPOH01000023.1 Protein Homology CDS 9154 9588 . + 0 ID=cds-WP_000218863.1;Parent=gene-CCO46_RS21650;Dbxref=GenBank:WP_000218863.1;Name=WP_000218863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218847.1;locus_tag=CCO46_RS21650;product=hypothetical protein;protein_id=WP_000218863.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 9682 9948 . + . ID=gene-CCO46_RS21655;Name=CCO46_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21655;old_locus_tag=CCO46_21640 NZ_NPOH01000023.1 Protein Homology CDS 9682 9948 . + 0 ID=cds-WP_001247862.1;Parent=gene-CCO46_RS21655;Dbxref=GenBank:WP_001247862.1;Name=WP_001247862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247860.1;locus_tag=CCO46_RS21655;product=hypothetical protein;protein_id=WP_001247862.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 10013 10915 . + . ID=gene-CCO46_RS21660;Name=CCO46_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21660;old_locus_tag=CCO46_21645 NZ_NPOH01000023.1 Protein Homology CDS 10013 10915 . + 0 ID=cds-WP_000038404.1;Parent=gene-CCO46_RS21660;Dbxref=GenBank:WP_000038404.1;Name=WP_000038404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=CCO46_RS21660;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000038404.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 10915 11208 . + . ID=gene-CCO46_RS21665;Name=CCO46_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21665;old_locus_tag=CCO46_21650 NZ_NPOH01000023.1 Protein Homology CDS 10915 11208 . + 0 ID=cds-WP_077250487.1;Parent=gene-CCO46_RS21665;Dbxref=GenBank:WP_077250487.1;Name=WP_077250487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014358130.1;locus_tag=CCO46_RS21665;product=hypothetical protein;protein_id=WP_077250487.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 11239 11490 . - . ID=gene-CCO46_RS21670;Name=CCO46_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21670;old_locus_tag=CCO46_21655 NZ_NPOH01000023.1 Protein Homology CDS 11239 11490 . - 0 ID=cds-WP_000148286.1;Parent=gene-CCO46_RS21670;Dbxref=GenBank:WP_000148286.1;Name=WP_000148286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003980153.1;locus_tag=CCO46_RS21670;product=helix-turn-helix transcriptional regulator;protein_id=WP_000148286.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 12071 12919 . + . ID=gene-CCO46_RS21685;Name=CCO46_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21685;old_locus_tag=CCO46_21670 NZ_NPOH01000023.1 Protein Homology CDS 12071 12919 . + 0 ID=cds-WP_001077027.1;Parent=gene-CCO46_RS21685;Dbxref=GenBank:WP_001077027.1;Name=WP_001077027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401764.1;locus_tag=CCO46_RS21685;product=DUF4942 domain-containing protein;protein_id=WP_001077027.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 13005 13340 . - . ID=gene-CCO46_RS21690;Name=CCO46_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21690;old_locus_tag=CCO46_21675 NZ_NPOH01000023.1 Protein Homology CDS 13005 13340 . - 0 ID=cds-WP_000157086.1;Parent=gene-CCO46_RS21690;Dbxref=GenBank:WP_000157086.1;Name=WP_000157086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000157082.1;locus_tag=CCO46_RS21690;product=molybdopterin-guanine dinucleotide biosynthesis protein MobC;protein_id=WP_000157086.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 13574 13906 . + . ID=gene-CCO46_RS21695;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=CCO46_RS21695;old_locus_tag=CCO46_21680 NZ_NPOH01000023.1 Protein Homology CDS 13574 13906 . + 0 ID=cds-WP_001283947.1;Parent=gene-CCO46_RS21695;Dbxref=GenBank:WP_001283947.1;Name=WP_001283947.1;gbkey=CDS;gene=nikA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283947.1;locus_tag=CCO46_RS21695;product=IncI1-type relaxosome accessory protein NikA;protein_id=WP_001283947.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 13917 16616 . + . ID=gene-CCO46_RS21700;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=CCO46_RS21700;old_locus_tag=CCO46_21685 NZ_NPOH01000023.1 Protein Homology CDS 13917 16616 . + 0 ID=cds-WP_001474686.1;Parent=gene-CCO46_RS21700;Dbxref=GenBank:WP_001474686.1;Name=WP_001474686.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001387486.1;locus_tag=CCO46_RS21700;product=IncI1-type relaxase NikB;protein_id=WP_001474686.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 16653 18944 . - . ID=gene-CCO46_RS21705;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=CCO46_RS21705;old_locus_tag=CCO46_21690 NZ_NPOH01000023.1 Protein Homology CDS 16653 18944 . - 0 ID=cds-WP_001289271.1;Parent=gene-CCO46_RS21705;Dbxref=GenBank:WP_001289271.1;Name=WP_001289271.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289278.1;locus_tag=CCO46_RS21705;product=F-type conjugative transfer protein TrbC;protein_id=WP_001289271.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 18937 20007 . - . ID=gene-CCO46_RS21710;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=CCO46_RS21710;old_locus_tag=CCO46_21695 NZ_NPOH01000023.1 Protein Homology CDS 18937 20007 . - 0 ID=cds-WP_000151575.1;Parent=gene-CCO46_RS21710;Dbxref=GenBank:WP_000151575.1;Name=WP_000151575.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151583.1;locus_tag=CCO46_RS21710;product=IncI1-type conjugal transfer protein TrbB;protein_id=WP_000151575.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 20026 21234 . - . ID=gene-CCO46_RS21715;Name=trbA;gbkey=Gene;gene=trbA;gene_biotype=protein_coding;locus_tag=CCO46_RS21715;old_locus_tag=CCO46_21700 NZ_NPOH01000023.1 Protein Homology CDS 20026 21234 . - 0 ID=cds-WP_000121273.1;Parent=gene-CCO46_RS21715;Dbxref=GenBank:WP_000121273.1;Name=WP_000121273.1;gbkey=CDS;gene=trbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121273.1;locus_tag=CCO46_RS21715;product=IncI1-type conjugal transfer protein TrbA;protein_id=WP_000121273.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 21526 21678 . + . ID=gene-CCO46_RS21720;Name=CCO46_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21720;old_locus_tag=CCO46_21705 NZ_NPOH01000023.1 Protein Homology CDS 21526 21678 . + 0 ID=cds-WP_001303307.1;Parent=gene-CCO46_RS21720;Dbxref=GenBank:WP_001303307.1;Name=WP_001303307.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001618166.1;locus_tag=CCO46_RS21720;product=Hok/Gef family protein;protein_id=WP_001303307.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 21750 22001 . - . ID=gene-CCO46_RS21725;Name=CCO46_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21725;old_locus_tag=CCO46_21710 NZ_NPOH01000023.1 Protein Homology CDS 21750 22001 . - 0 ID=cds-WP_001291965.1;Parent=gene-CCO46_RS21725;Dbxref=GenBank:WP_001291965.1;Name=WP_001291965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291967.1;locus_tag=CCO46_RS21725;product=hypothetical protein;protein_id=WP_001291965.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 22925 23101 . - . ID=gene-CCO46_RS25255;Name=CCO46_RS25255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25255 NZ_NPOH01000023.1 Protein Homology CDS 22925 23101 . - 0 ID=cds-WP_001054900.1;Parent=gene-CCO46_RS25255;Dbxref=GenBank:WP_001054900.1;Name=WP_001054900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054900.1;locus_tag=CCO46_RS25255;product=hypothetical protein;protein_id=WP_001054900.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 23493 23702 . + . ID=gene-CCO46_RS21740;Name=CCO46_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21740;old_locus_tag=CCO46_21725 NZ_NPOH01000023.1 Protein Homology CDS 23493 23702 . + 0 ID=cds-WP_000062603.1;Parent=gene-CCO46_RS21740;Dbxref=GenBank:WP_000062603.1;Name=WP_000062603.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062602.1;locus_tag=CCO46_RS21740;product=HEAT repeat domain-containing protein;protein_id=WP_000062603.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 23774 24436 . - . ID=gene-CCO46_RS21745;Name=excA;gbkey=Gene;gene=excA;gene_biotype=protein_coding;locus_tag=CCO46_RS21745;old_locus_tag=CCO46_21730 NZ_NPOH01000023.1 Protein Homology CDS 23774 24436 . - 0 ID=cds-WP_000644794.1;Parent=gene-CCO46_RS21745;Dbxref=GenBank:WP_000644794.1;Name=WP_000644794.1;gbkey=CDS;gene=excA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000653334.1;locus_tag=CCO46_RS21745;product=plasmid IncI1-type surface exclusion protein ExcA;protein_id=WP_000644794.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 24507 26675 . - . ID=gene-CCO46_RS21750;Name=CCO46_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21750;old_locus_tag=CCO46_21735 NZ_NPOH01000023.1 Protein Homology CDS 24507 26675 . - 0 ID=cds-WP_000698368.1;Parent=gene-CCO46_RS21750;Dbxref=GenBank:WP_000698368.1;Name=WP_000698368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001476650.1;locus_tag=CCO46_RS21750;product=DotA/TraY family protein;protein_id=WP_000698368.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 26772 27356 . - . ID=gene-CCO46_RS21755;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=CCO46_RS21755;old_locus_tag=CCO46_21740 NZ_NPOH01000023.1 Protein Homology CDS 26772 27356 . - 0 ID=cds-WP_001037998.1;Parent=gene-CCO46_RS21755;Dbxref=GenBank:WP_001037998.1;Name=WP_001037998.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001037983.1;locus_tag=CCO46_RS21755;product=conjugal transfer protein TraX;protein_id=WP_001037998.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 27385 28587 . - . ID=gene-CCO46_RS21760;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=CCO46_RS21760;old_locus_tag=CCO46_21745 NZ_NPOH01000023.1 Protein Homology CDS 27385 28587 . - 0 ID=cds-WP_001189158.1;Parent=gene-CCO46_RS21760;Dbxref=GenBank:WP_001189158.1;Name=WP_001189158.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001387490.1;locus_tag=CCO46_RS21760;product=IncI1-type conjugal transfer protein TraW;protein_id=WP_001189158.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 28554 29168 . - . ID=gene-CCO46_RS21765;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=CCO46_RS21765;old_locus_tag=CCO46_21750 NZ_NPOH01000023.1 Protein Homology CDS 28554 29168 . - 0 ID=cds-WP_000337394.1;Parent=gene-CCO46_RS21765;Dbxref=GenBank:WP_000337394.1;Name=WP_000337394.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337395.1;locus_tag=CCO46_RS21765;product=IncI1-type conjugal transfer protein TraV;protein_id=WP_000337394.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 29168 32212 . - . ID=gene-CCO46_RS21770;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=CCO46_RS21770;old_locus_tag=CCO46_21755 NZ_NPOH01000023.1 Protein Homology CDS 29168 32212 . - 0 ID=cds-WP_001024752.1;Parent=gene-CCO46_RS21770;Dbxref=GenBank:WP_001024752.1;Name=WP_001024752.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024789.1;locus_tag=CCO46_RS21770;product=IncI1-type conjugal transfer protein TraU;protein_id=WP_001024752.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 32302 33102 . - . ID=gene-CCO46_RS21775;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=CCO46_RS21775;old_locus_tag=CCO46_21760 NZ_NPOH01000023.1 Protein Homology CDS 32302 33102 . - 0 ID=cds-WP_001164788.1;Parent=gene-CCO46_RS21775;Dbxref=GenBank:WP_001164788.1;Name=WP_001164788.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164783.1;locus_tag=CCO46_RS21775;product=IncI1-type conjugal transfer protein TraT;protein_id=WP_001164788.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 33086 33274 . - . ID=gene-CCO46_RS21780;Name=traS;gbkey=Gene;gene=traS;gene_biotype=protein_coding;locus_tag=CCO46_RS21780;old_locus_tag=CCO46_21765 NZ_NPOH01000023.1 Protein Homology CDS 33086 33274 . - 0 ID=cds-WP_001277255.1;Parent=gene-CCO46_RS21780;Dbxref=GenBank:WP_001277255.1;Name=WP_001277255.1;gbkey=CDS;gene=traS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277253.1;locus_tag=CCO46_RS21780;product=putative conjugal transfer protein TraS;protein_id=WP_001277255.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 33338 33742 . - . ID=gene-CCO46_RS21785;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=CCO46_RS21785;old_locus_tag=CCO46_21770 NZ_NPOH01000023.1 Protein Homology CDS 33338 33742 . - 0 ID=cds-WP_000086960.1;Parent=gene-CCO46_RS21785;Dbxref=GenBank:WP_000086960.1;Name=WP_000086960.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086965.1;locus_tag=CCO46_RS21785;product=IncI1-type conjugal transfer protein TraR;protein_id=WP_000086960.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 33793 34320 . - . ID=gene-CCO46_RS21790;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=CCO46_RS21790;old_locus_tag=CCO46_21775 NZ_NPOH01000023.1 Protein Homology CDS 33793 34320 . - 0 ID=cds-WP_001055569.1;Parent=gene-CCO46_RS21790;Dbxref=GenBank:WP_001055569.1;Name=WP_001055569.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055571.1;locus_tag=CCO46_RS21790;product=conjugal transfer protein TraQ;protein_id=WP_001055569.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 34320 35024 . - . ID=gene-CCO46_RS21795;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=CCO46_RS21795;old_locus_tag=CCO46_21780 NZ_NPOH01000023.1 Protein Homology CDS 34320 35024 . - 0 ID=cds-WP_000801920.1;Parent=gene-CCO46_RS21795;Dbxref=GenBank:WP_000801920.1;Name=WP_000801920.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801920.1;locus_tag=CCO46_RS21795;product=IncI1-type conjugal transfer protein TraP;protein_id=WP_000801920.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 35024 36313 . - . ID=gene-CCO46_RS21800;Name=traO;gbkey=Gene;gene=traO;gene_biotype=protein_coding;locus_tag=CCO46_RS21800;old_locus_tag=CCO46_21785 NZ_NPOH01000023.1 Protein Homology CDS 35024 36313 . - 0 ID=cds-WP_001271997.1;Parent=gene-CCO46_RS21800;Dbxref=GenBank:WP_001271997.1;Name=WP_001271997.1;gbkey=CDS;gene=traO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272004.1;locus_tag=CCO46_RS21800;product=conjugal transfer protein TraO;protein_id=WP_001271997.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 36316 37299 . - . ID=gene-CCO46_RS21805;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=CCO46_RS21805;old_locus_tag=CCO46_21790 NZ_NPOH01000023.1 Protein Homology CDS 36316 37299 . - 0 ID=cds-WP_001191878.1;Parent=gene-CCO46_RS21805;Dbxref=GenBank:WP_001191878.1;Name=WP_001191878.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191879.1;locus_tag=CCO46_RS21805;product=IncI1-type conjugal transfer protein TraN;protein_id=WP_001191878.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 37310 38002 . - . ID=gene-CCO46_RS21810;Name=CCO46_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21810;old_locus_tag=CCO46_21795 NZ_NPOH01000023.1 Protein Homology CDS 37310 38002 . - 0 ID=cds-WP_000138552.1;Parent=gene-CCO46_RS21810;Dbxref=GenBank:WP_000138552.1;Name=WP_000138552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138553.1;locus_tag=CCO46_RS21810;product=DotI/IcmL family type IV secretion protein;protein_id=WP_000138552.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 37999 38346 . - . ID=gene-CCO46_RS21815;Name=CCO46_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21815;old_locus_tag=CCO46_21800 NZ_NPOH01000023.1 Protein Homology CDS 37999 38346 . - 0 ID=cds-WP_001055900.1;Parent=gene-CCO46_RS21815;Dbxref=GenBank:WP_001055900.1;Name=WP_001055900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629514.1;locus_tag=CCO46_RS21815;product=conjugal transfer protein;protein_id=WP_001055900.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 38364 42131 . - . ID=gene-CCO46_RS21820;Name=CCO46_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21820;old_locus_tag=CCO46_21805 NZ_NPOH01000023.1 Protein Homology CDS 38364 42131 . - 0 ID=cds-WP_001141535.1;Parent=gene-CCO46_RS21820;Dbxref=GenBank:WP_001141535.1;Name=WP_001141535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231897.1;locus_tag=CCO46_RS21820;product=LPD7 domain-containing protein;protein_id=WP_001141535.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 42221 42772 . - . ID=gene-CCO46_RS21825;Name=CCO46_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21825;old_locus_tag=CCO46_21810 NZ_NPOH01000023.1 Protein Homology CDS 42221 42772 . - 0 ID=cds-WP_000014584.1;Parent=gene-CCO46_RS21825;Dbxref=GenBank:WP_000014584.1;Name=WP_000014584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001493807.1;locus_tag=CCO46_RS21825;product=phospholipase D family protein;protein_id=WP_000014584.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 42787 43077 . - . ID=gene-CCO46_RS21830;Name=CCO46_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21830;old_locus_tag=CCO46_21815 NZ_NPOH01000023.1 Protein Homology CDS 42787 43077 . - 0 ID=cds-WP_001299214.1;Parent=gene-CCO46_RS21830;Dbxref=GenBank:WP_001299214.1;Name=WP_001299214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542523.1;locus_tag=CCO46_RS21830;product=hypothetical protein;protein_id=WP_001299214.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 43074 44222 . - . ID=gene-CCO46_RS21835;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=CCO46_RS21835;old_locus_tag=CCO46_21820 NZ_NPOH01000023.1 Protein Homology CDS 43074 44222 . - 0 ID=cds-WP_001024972.1;Parent=gene-CCO46_RS21835;Dbxref=GenBank:WP_001024972.1;Name=WP_001024972.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480051.1;locus_tag=CCO46_RS21835;product=plasmid transfer ATPase TraJ;protein_id=WP_001024972.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 44219 45037 . - . ID=gene-CCO46_RS21840;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=CCO46_RS21840;old_locus_tag=CCO46_21825 NZ_NPOH01000023.1 Protein Homology CDS 44219 45037 . - 0 ID=cds-WP_000646097.1;Parent=gene-CCO46_RS21840;Dbxref=GenBank:WP_000646097.1;Name=WP_000646097.1;gbkey=CDS;gene=traI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646098.1;locus_tag=CCO46_RS21840;product=IncI1-type conjugal transfer lipoprotein TraI;protein_id=WP_000646097.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 45034 45492 . - . ID=gene-CCO46_RS21845;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=CCO46_RS21845;old_locus_tag=CCO46_21830 NZ_NPOH01000023.1 Protein Homology CDS 45034 45492 . - 0 ID=cds-WP_001079808.1;Parent=gene-CCO46_RS21845;Dbxref=GenBank:WP_001079808.1;Name=WP_001079808.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079808.1;locus_tag=CCO46_RS21845;product=IncI1-type conjugal transfer lipoprotein TraH;protein_id=WP_001079808.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 45887 46471 . - . ID=gene-CCO46_RS21850;Name=CCO46_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21850;old_locus_tag=CCO46_21835 NZ_NPOH01000023.1 Protein Homology CDS 45887 46471 . - 0 ID=cds-WP_000977517.1;Parent=gene-CCO46_RS21850;Dbxref=GenBank:WP_000977517.1;Name=WP_000977517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542524.1;locus_tag=CCO46_RS21850;product=histidine phosphatase family protein;protein_id=WP_000977517.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 46531 47733 . - . ID=gene-CCO46_RS21855;Name=CCO46_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21855;old_locus_tag=CCO46_21840 NZ_NPOH01000023.1 Protein Homology CDS 46531 47733 . - 0 ID=cds-WP_000976353.1;Parent=gene-CCO46_RS21855;Dbxref=GenBank:WP_000976353.1;Name=WP_000976353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003557916.1;locus_tag=CCO46_RS21855;product=conjugal transfer protein TraF;protein_id=WP_000976353.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 47819 48643 . - . ID=gene-CCO46_RS21860;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=CCO46_RS21860;old_locus_tag=CCO46_21845 NZ_NPOH01000023.1 Protein Homology CDS 47819 48643 . - 0 ID=cds-WP_001238927.1;Parent=gene-CCO46_RS21860;Dbxref=GenBank:WP_001238927.1;Name=WP_001238927.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238927.1;locus_tag=CCO46_RS21860;product=conjugal transfer protein TraE;protein_id=WP_001238927.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 48794 49948 . - . ID=gene-CCO46_RS21865;Name=CCO46_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21865;old_locus_tag=CCO46_21850 NZ_NPOH01000023.1 Protein Homology CDS 48794 49948 . - 0 ID=cds-WP_001139958.1;Parent=gene-CCO46_RS21865;Dbxref=GenBank:WP_001139958.1;Name=WP_001139958.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396170.1;locus_tag=CCO46_RS21865;product=tyrosine-type recombinase/integrase;protein_id=WP_001139958.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 50639 50887 . + . ID=gene-CCO46_RS21880;Name=CCO46_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21880;old_locus_tag=CCO46_21865 NZ_NPOH01000023.1 Protein Homology CDS 50639 50887 . + 0 ID=cds-WP_001349157.1;Parent=gene-CCO46_RS21880;Dbxref=GenBank:WP_001349157.1;Name=WP_001349157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001349157.1;locus_tag=CCO46_RS21880;product=hypothetical protein;protein_id=WP_001349157.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 50884 52176 . - . ID=gene-CCO46_RS21885;Name=CCO46_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21885;old_locus_tag=CCO46_21870 NZ_NPOH01000023.1 Protein Homology CDS 50884 52176 . - 0 ID=cds-WP_032274560.1;Parent=gene-CCO46_RS21885;Dbxref=GenBank:WP_032274560.1;Name=WP_032274560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012565250.1;locus_tag=CCO46_RS21885;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_032274560.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 52176 52832 . - . ID=gene-CCO46_RS21890;Name=CCO46_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21890;old_locus_tag=CCO46_21875 NZ_NPOH01000023.1 Protein Homology CDS 52176 52832 . - 0 ID=cds-WP_001193553.1;Parent=gene-CCO46_RS21890;Dbxref=GenBank:WP_001193553.1;Name=WP_001193553.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193550.1;locus_tag=CCO46_RS21890;product=prepilin peptidase;protein_id=WP_001193553.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 52817 53377 . - . ID=gene-CCO46_RS21895;Name=CCO46_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21895;old_locus_tag=CCO46_21880 NZ_NPOH01000023.1 Protein Homology CDS 52817 53377 . - 0 ID=cds-WP_000014116.1;Parent=gene-CCO46_RS21895;Dbxref=GenBank:WP_000014116.1;Name=WP_000014116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774171.1;locus_tag=CCO46_RS21895;product=lytic transglycosylase domain-containing protein;protein_id=WP_000014116.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 53387 54001 . - . ID=gene-CCO46_RS21900;Name=CCO46_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21900;old_locus_tag=CCO46_21885 NZ_NPOH01000023.1 Protein Homology CDS 53387 54001 . - 0 ID=cds-WP_000959785.1;Parent=gene-CCO46_RS21900;Dbxref=GenBank:WP_000959785.1;Name=WP_000959785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959783.1;locus_tag=CCO46_RS21900;product=type 4 pilus major pilin;protein_id=WP_000959785.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 54019 55116 . - . ID=gene-CCO46_RS21905;Name=CCO46_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21905;old_locus_tag=CCO46_21890 NZ_NPOH01000023.1 Protein Homology CDS 54019 55116 . - 0 ID=cds-WP_001208805.1;Parent=gene-CCO46_RS21905;Dbxref=GenBank:WP_001208805.1;Name=WP_001208805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001699973.1;locus_tag=CCO46_RS21905;product=type II secretion system F family protein;protein_id=WP_001208805.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 55129 56682 . - . ID=gene-CCO46_RS21910;Name=CCO46_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21910;old_locus_tag=CCO46_21895 NZ_NPOH01000023.1 Protein Homology CDS 55129 56682 . - 0 ID=cds-WP_000362202.1;Parent=gene-CCO46_RS21910;Dbxref=GenBank:WP_000362202.1;Name=WP_000362202.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362202.1;locus_tag=CCO46_RS21910;product=GspE/PulE family protein;protein_id=WP_000362202.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 56693 57145 . - . ID=gene-CCO46_RS21915;Name=pilP;gbkey=Gene;gene=pilP;gene_biotype=protein_coding;locus_tag=CCO46_RS21915;old_locus_tag=CCO46_21900 NZ_NPOH01000023.1 Protein Homology CDS 56693 57145 . - 0 ID=cds-WP_001247336.1;Parent=gene-CCO46_RS21915;Dbxref=GenBank:WP_001247336.1;Name=WP_001247336.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilP;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247331.1;locus_tag=CCO46_RS21915;product=type IV pilus biogenesis protein PilP;protein_id=WP_001247336.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 57132 58427 . - . ID=gene-CCO46_RS21920;Name=pilO2;gbkey=Gene;gene=pilO2;gene_biotype=protein_coding;locus_tag=CCO46_RS21920;old_locus_tag=CCO46_21905 NZ_NPOH01000023.1 Protein Homology CDS 57132 58427 . - 0 ID=cds-WP_000752774.1;Parent=gene-CCO46_RS21920;Dbxref=GenBank:WP_000752774.1;Name=WP_000752774.1;gbkey=CDS;gene=pilO2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682966.1;locus_tag=CCO46_RS21920;product=type 4b pilus protein PilO2;protein_id=WP_000752774.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 58420 60102 . - . ID=gene-CCO46_RS21925;Name=CCO46_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21925;old_locus_tag=CCO46_21910 NZ_NPOH01000023.1 Protein Homology CDS 58420 60102 . - 0 ID=cds-WP_000748143.1;Parent=gene-CCO46_RS21925;Dbxref=GenBank:WP_000748143.1;Name=WP_000748143.1;Ontology_term=GO:0009297,GO:0009306,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744074.1;locus_tag=CCO46_RS21925;product=PilN family type IVB pilus formation outer membrane protein;protein_id=WP_000748143.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 60116 60553 . - . ID=gene-CCO46_RS21930;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=CCO46_RS21930;old_locus_tag=CCO46_21915 NZ_NPOH01000023.1 Protein Homology CDS 60116 60553 . - 0 ID=cds-WP_000539807.1;Parent=gene-CCO46_RS21930;Dbxref=GenBank:WP_000539807.1;Name=WP_000539807.1;gbkey=CDS;gene=pilM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744073.1;locus_tag=CCO46_RS21930;product=type IV pilus biogenesis protein PilM;protein_id=WP_000539807.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 60553 61620 . - . ID=gene-CCO46_RS21935;Name=pilL;gbkey=Gene;gene=pilL;gene_biotype=protein_coding;locus_tag=CCO46_RS21935;old_locus_tag=CCO46_21920 NZ_NPOH01000023.1 Protein Homology CDS 60553 61620 . - 0 ID=cds-WP_000742600.1;Parent=gene-CCO46_RS21935;Dbxref=GenBank:WP_000742600.1;Name=WP_000742600.1;gbkey=CDS;gene=pilL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001360287.1;locus_tag=CCO46_RS21935;product=type IV pilus biogenesis lipoprotein PilL;protein_id=WP_000742600.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 61654 62244 . - . ID=gene-CCO46_RS25765;Name=CCO46_RS25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25765;old_locus_tag=CCO46_21925 NZ_NPOH01000023.1 Protein Homology CDS 61654 62244 . - 0 ID=cds-WP_001334619.1;Parent=gene-CCO46_RS25765;Dbxref=GenBank:WP_001334619.1;Name=WP_001334619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334619.1;locus_tag=CCO46_RS25765;product=hypothetical protein;protein_id=WP_001334619.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 62294 62746 . - . ID=gene-CCO46_RS21945;Name=CCO46_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21945;old_locus_tag=CCO46_21930 NZ_NPOH01000023.1 Protein Homology CDS 62294 62746 . - 0 ID=cds-WP_000008892.1;Parent=gene-CCO46_RS21945;Dbxref=GenBank:WP_000008892.1;Name=WP_000008892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008891.1;locus_tag=CCO46_RS21945;product=hypothetical protein;protein_id=WP_000008892.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 62789 63043 . - . ID=gene-CCO46_RS21950;Name=CCO46_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21950;old_locus_tag=CCO46_21935 NZ_NPOH01000023.1 Protein Homology CDS 62789 63043 . - 0 ID=cds-WP_001136192.1;Parent=gene-CCO46_RS21950;Dbxref=GenBank:WP_001136192.1;Name=WP_001136192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136193.1;locus_tag=CCO46_RS21950;product=PilI type IV pilus biogenesis protein;protein_id=WP_001136192.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 63311 63877 . - . ID=gene-CCO46_RS21955;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=CCO46_RS21955;old_locus_tag=CCO46_21940 NZ_NPOH01000023.1 Protein Homology CDS 63311 63877 . - 0 ID=cds-WP_000776428.1;Parent=gene-CCO46_RS21955;Dbxref=GenBank:WP_000776428.1;Name=WP_000776428.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776428.1;locus_tag=CCO46_RS21955;product=protein TraD;protein_id=WP_000776428.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 63891 64574 . - . ID=gene-CCO46_RS21960;Name=CCO46_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21960;old_locus_tag=CCO46_21945 NZ_NPOH01000023.1 Protein Homology CDS 63891 64574 . - 0 ID=cds-WP_000213857.1;Parent=gene-CCO46_RS21960;Dbxref=GenBank:WP_000213857.1;Name=WP_000213857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213862.1;locus_tag=CCO46_RS21960;product=conjugal transfer protein TraC;protein_id=WP_000213857.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 64828 65361 . - . ID=gene-CCO46_RS21970;Name=CCO46_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21970;old_locus_tag=CCO46_21955 NZ_NPOH01000023.1 Protein Homology CDS 64828 65361 . - 0 ID=cds-WP_001303319.1;Parent=gene-CCO46_RS21970;Dbxref=GenBank:WP_001303319.1;Name=WP_001303319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001303319.1;locus_tag=CCO46_RS21970;product=transcription termination/antitermination NusG family protein;protein_id=WP_001303319.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 65803 66090 . - . ID=gene-CCO46_RS21980;Name=CCO46_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS21980;old_locus_tag=CCO46_21965 NZ_NPOH01000023.1 Protein Homology CDS 65803 66090 . - 0 ID=cds-WP_000074849.1;Parent=gene-CCO46_RS21980;Dbxref=GenBank:WP_000074849.1;Name=WP_000074849.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074849.1;locus_tag=CCO46_RS21980;product=helix-turn-helix transcriptional regulator;protein_id=WP_000074849.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 66008 66271 . - . ID=gene-CCO46_RS25925;Name=CCO46_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25925;old_locus_tag=CCO46_21970 NZ_NPOH01000023.1 Protein Homology CDS 66008 66271 . - 0 ID=cds-WP_001324596.1;Parent=gene-CCO46_RS25925;Dbxref=GenBank:WP_001324596.1;Name=WP_001324596.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.6;locus_tag=CCO46_RS25925;product=ash family protein;protein_id=WP_001324596.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 67244 68275 . + . ID=gene-CCO46_RS22000;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=CCO46_RS22000;old_locus_tag=CCO46_21985 NZ_NPOH01000023.1 Protein Homology CDS 67244 68275 . + 0 ID=cds-WP_000907873.1;Parent=gene-CCO46_RS22000;Dbxref=GenBank:WP_000907873.1;Name=WP_000907873.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907860.1;locus_tag=CCO46_RS22000;product=plasmid replication initiator RepA;protein_id=WP_000907873.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 69184 69453 . + . ID=gene-CCO46_RS22015;Name=yacA;gbkey=Gene;gene=yacA;gene_biotype=protein_coding;locus_tag=CCO46_RS22015;old_locus_tag=CCO46_22000 NZ_NPOH01000023.1 Protein Homology CDS 69184 69453 . + 0 ID=cds-WP_000079928.1;Parent=gene-CCO46_RS22015;Dbxref=GenBank:WP_000079928.1;Name=WP_000079928.1;gbkey=CDS;gene=yacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056448.1;locus_tag=CCO46_RS22015;product=type II toxin-antitoxin system antitoxin YacA;protein_id=WP_000079928.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 69453 69731 . + . ID=gene-CCO46_RS22020;Name=yacB;gbkey=Gene;gene=yacB;gene_biotype=protein_coding;locus_tag=CCO46_RS22020;old_locus_tag=CCO46_22005 NZ_NPOH01000023.1 Protein Homology CDS 69453 69731 . + 0 ID=cds-WP_001384452.1;Parent=gene-CCO46_RS22020;Dbxref=GenBank:WP_001384452.1;Name=WP_001384452.1;gbkey=CDS;gene=yacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009346.1;locus_tag=CCO46_RS22020;product=type II toxin-antitoxin system toxin YacB;protein_id=WP_001384452.1;transl_table=11 NZ_NPOH01000023.1 RefSeq gene 69771 70619 . + . ID=gene-CCO46_RS22025;Name=CCO46_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22025;old_locus_tag=CCO46_22010 NZ_NPOH01000023.1 Protein Homology CDS 69771 70619 . + 0 ID=cds-WP_001057996.1;Parent=gene-CCO46_RS22025;Dbxref=GenBank:WP_001057996.1;Name=WP_001057996.1;Ontology_term=GO:0003677,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001057990.1;locus_tag=CCO46_RS22025;product=3'-5' exonuclease;protein_id=WP_001057996.1;transl_table=11 NZ_NPOH01000023.1 RefSeq pseudogene 70976 72157 . + . ID=gene-CCO46_RS22035;Name=CCO46_RS22035;end_range=72157,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS22035;old_locus_tag=CCO46_22020;partial=true;pseudo=true;start_range=.,70976 NZ_NPOH01000023.1 Protein Homology CDS 70976 72157 . + 0 ID=cds-CCO46_RS22035;Parent=gene-CCO46_RS22035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=72157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013124600.1;locus_tag=CCO46_RS22035;partial=true;product=transposase;pseudo=true;start_range=.,70976;transl_table=11 ##sequence-region NZ_NPOH01000024.1 1 66614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000024.1 RefSeq region 1 66614 . + . ID=NZ_NPOH01000024.1:1..66614;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000024.1 RefSeq gene 1 1012 . + . ID=gene-CCO46_RS22040;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=CCO46_RS22040;old_locus_tag=CCO46_22025;partial=true;start_range=.,1 NZ_NPOH01000024.1 Protein Homology CDS 1 1012 . + 1 ID=cds-WP_094030796.1;Parent=gene-CCO46_RS22040;Dbxref=GenBank:WP_094030796.1;Name=WP_094030796.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=CCO46_RS22040;partial=true;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_094030796.1;start_range=.,1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 1019 2476 . + . ID=gene-CCO46_RS22045;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=CCO46_RS22045;old_locus_tag=CCO46_22030 NZ_NPOH01000024.1 Protein Homology CDS 1019 2476 . + 0 ID=cds-WP_000156669.1;Parent=gene-CCO46_RS22045;Dbxref=GenBank:WP_000156669.1;Name=WP_000156669.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=CCO46_RS22045;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156669.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 2617 3621 . - . ID=gene-CCO46_RS22050;Name=CCO46_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22050;old_locus_tag=CCO46_22035 NZ_NPOH01000024.1 Protein Homology CDS 2617 3621 . - 0 ID=cds-WP_058331728.1;Parent=gene-CCO46_RS22050;Dbxref=GenBank:WP_058331728.1;Name=WP_058331728.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131502.1;locus_tag=CCO46_RS22050;product=chemotaxis protein;protein_id=WP_058331728.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 3687 4604 . - . ID=gene-CCO46_RS22055;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=CCO46_RS22055;old_locus_tag=CCO46_22040 NZ_NPOH01000024.1 Protein Homology CDS 3687 4604 . - 0 ID=cds-WP_097363507.1;Parent=gene-CCO46_RS22055;Dbxref=GenBank:WP_097363507.1;Name=WP_097363507.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=CCO46_RS22055;product=ribonuclease BN;protein_id=WP_097363507.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 4665 5126 . + . ID=gene-CCO46_RS22060;Name=CCO46_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22060;old_locus_tag=CCO46_22045 NZ_NPOH01000024.1 Protein Homology CDS 4665 5126 . + 0 ID=cds-WP_000568155.1;Parent=gene-CCO46_RS22060;Dbxref=GenBank:WP_000568155.1;Name=WP_000568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=CCO46_RS22060;product=GNAT family N-acetyltransferase;protein_id=WP_000568155.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 5181 5486 . + . ID=gene-CCO46_RS22065;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=CCO46_RS22065;old_locus_tag=CCO46_22050 NZ_NPOH01000024.1 Protein Homology CDS 5181 5486 . + 0 ID=cds-WP_001522308.1;Parent=gene-CCO46_RS22065;Dbxref=GenBank:WP_001522308.1;Name=WP_001522308.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=CCO46_RS22065;product=stress response protein ElaB;protein_id=WP_001522308.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 5587 6882 . + . ID=gene-CCO46_RS22070;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=CCO46_RS22070;old_locus_tag=CCO46_22055 NZ_NPOH01000024.1 Protein Homology CDS 5587 6882 . + 0 ID=cds-WP_000555674.1;Parent=gene-CCO46_RS22070;Dbxref=GenBank:WP_000555674.1;Name=WP_000555674.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=CCO46_RS22070;product=isochorismate synthase MenF;protein_id=WP_000555674.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 6968 8638 . + . ID=gene-CCO46_RS22075;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CCO46_RS22075;old_locus_tag=CCO46_22060 NZ_NPOH01000024.1 Protein Homology CDS 6968 8638 . + 0 ID=cds-WP_000116395.1;Parent=gene-CCO46_RS22075;Dbxref=GenBank:WP_000116395.1;Name=WP_000116395.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=CCO46_RS22075;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116395.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 8635 9393 . + . ID=gene-CCO46_RS22080;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CCO46_RS22080;old_locus_tag=CCO46_22065 NZ_NPOH01000024.1 Protein Homology CDS 8635 9393 . + 0 ID=cds-WP_000979134.1;Parent=gene-CCO46_RS22080;Dbxref=GenBank:WP_000979134.1;Name=WP_000979134.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=CCO46_RS22080;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000979134.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 9408 10265 . + . ID=gene-CCO46_RS22085;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CCO46_RS22085;old_locus_tag=CCO46_22070 NZ_NPOH01000024.1 Protein Homology CDS 9408 10265 . + 0 ID=cds-WP_000640013.1;Parent=gene-CCO46_RS22085;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=CCO46_RS22085;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 10265 11227 . + . ID=gene-CCO46_RS22090;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CCO46_RS22090;old_locus_tag=CCO46_22075 NZ_NPOH01000024.1 Protein Homology CDS 10265 11227 . + 0 ID=cds-WP_097363508.1;Parent=gene-CCO46_RS22090;Dbxref=GenBank:WP_097363508.1;Name=WP_097363508.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=CCO46_RS22090;product=o-succinylbenzoate synthase;protein_id=WP_097363508.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 11224 12591 . + . ID=gene-CCO46_RS22095;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CCO46_RS22095;old_locus_tag=CCO46_22080 NZ_NPOH01000024.1 Protein Homology CDS 11224 12591 . + 0 ID=cds-WP_000144658.1;Parent=gene-CCO46_RS22095;Dbxref=GenBank:WP_000144658.1;Name=WP_000144658.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=CCO46_RS22095;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000144658.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 12689 12946 . + . ID=gene-CCO46_RS22100;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=CCO46_RS22100;old_locus_tag=CCO46_22085 NZ_NPOH01000024.1 Protein Homology CDS 12689 12946 . + 0 ID=cds-WP_000455132.1;Parent=gene-CCO46_RS22100;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=CCO46_RS22100;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 12941 13318 . - . ID=gene-CCO46_RS22105;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=CCO46_RS22105;old_locus_tag=CCO46_22090 NZ_NPOH01000024.1 Protein Homology CDS 12941 13318 . - 0 ID=cds-WP_000538692.1;Parent=gene-CCO46_RS22105;Dbxref=GenBank:WP_000538692.1;Name=WP_000538692.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=CCO46_RS22105;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538692.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 13318 13653 . - . ID=gene-CCO46_RS22110;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=CCO46_RS22110;old_locus_tag=CCO46_22095 NZ_NPOH01000024.1 Protein Homology CDS 13318 13653 . - 0 ID=cds-WP_000580688.1;Parent=gene-CCO46_RS22110;Dbxref=GenBank:WP_000580688.1;Name=WP_000580688.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=CCO46_RS22110;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580688.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 13650 15296 . - . ID=gene-CCO46_RS22115;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=CCO46_RS22115;old_locus_tag=CCO46_22100 NZ_NPOH01000024.1 Protein Homology CDS 13650 15296 . - 0 ID=cds-WP_080198465.1;Parent=gene-CCO46_RS22115;Dbxref=GenBank:WP_080198465.1;Name=WP_080198465.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=CCO46_RS22115;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_080198465.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 15293 16192 . - . ID=gene-CCO46_RS22120;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=CCO46_RS22120;old_locus_tag=CCO46_22105 NZ_NPOH01000024.1 Protein Homology CDS 15293 16192 . - 0 ID=cds-WP_097363509.1;Parent=gene-CCO46_RS22120;Dbxref=GenBank:WP_097363509.1;Name=WP_097363509.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=CCO46_RS22120;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_097363509.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 16189 18171 . - . ID=gene-CCO46_RS22125;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=CCO46_RS22125;old_locus_tag=CCO46_22110 NZ_NPOH01000024.1 Protein Homology CDS 16189 18171 . - 0 ID=cds-WP_097363510.1;Parent=gene-CCO46_RS22125;Dbxref=GenBank:WP_097363510.1;Name=WP_097363510.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=CCO46_RS22125;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_097363510.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 18168 19151 . - . ID=gene-CCO46_RS22130;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=CCO46_RS22130;old_locus_tag=CCO46_22115 NZ_NPOH01000024.1 Protein Homology CDS 18168 19151 . - 0 ID=cds-WP_000458893.1;Parent=gene-CCO46_RS22130;Dbxref=GenBank:WP_000458893.1;Name=WP_000458893.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=CCO46_RS22130;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458893.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 19154 20293 . - . ID=gene-CCO46_RS22135;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=CCO46_RS22135;old_locus_tag=CCO46_22120 NZ_NPOH01000024.1 Protein Homology CDS 19154 20293 . - 0 ID=cds-WP_125855789.1;Parent=gene-CCO46_RS22135;Dbxref=GenBank:WP_125855789.1;Name=WP_125855789.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=CCO46_RS22135;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_125855789.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 20592 21197 . + . ID=gene-CCO46_RS22140;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=CCO46_RS22140;old_locus_tag=CCO46_22125 NZ_NPOH01000024.1 Protein Homology CDS 20592 21197 . + 0 ID=cds-WP_000879258.1;Parent=gene-CCO46_RS22140;Dbxref=GenBank:WP_000879258.1;Name=WP_000879258.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=CCO46_RS22140;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879258.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 21242 21667 . - . ID=gene-CCO46_RS22145;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=CCO46_RS22145;old_locus_tag=CCO46_22130 NZ_NPOH01000024.1 Protein Homology CDS 21242 21667 . - 0 ID=cds-WP_058331725.1;Parent=gene-CCO46_RS22145;Dbxref=GenBank:WP_058331725.1;Name=WP_058331725.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=CCO46_RS22145;product=nucleoside triphosphatase NudI;protein_id=WP_058331725.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 21946 22488 . + . ID=gene-CCO46_RS22150;Name=CCO46_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22150;old_locus_tag=CCO46_22135 NZ_NPOH01000024.1 Protein Homology CDS 21946 22488 . + 0 ID=cds-WP_001670658.1;Parent=gene-CCO46_RS22150;Dbxref=GenBank:WP_001670658.1;Name=WP_001670658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=CCO46_RS22150;product=YfaZ family protein;protein_id=WP_001670658.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 22604 23800 . + . ID=gene-CCO46_RS22155;Name=CCO46_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22155;old_locus_tag=CCO46_22140 NZ_NPOH01000024.1 Protein Homology CDS 22604 23800 . + 0 ID=cds-WP_080160095.1;Parent=gene-CCO46_RS22155;Dbxref=GenBank:WP_080160095.1;Name=WP_080160095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=CCO46_RS22155;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_080160095.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 23898 24920 . - . ID=gene-CCO46_RS22160;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=CCO46_RS22160;old_locus_tag=CCO46_22145 NZ_NPOH01000024.1 Protein Homology CDS 23898 24920 . - 0 ID=cds-WP_058331723.1;Parent=gene-CCO46_RS22160;Dbxref=GenBank:WP_058331723.1;Name=WP_058331723.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=CCO46_RS22160;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_058331723.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 25493 26683 . - . ID=gene-CCO46_RS22175;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=CCO46_RS22175;old_locus_tag=CCO46_22160 NZ_NPOH01000024.1 Protein Homology CDS 25493 26683 . - 0 ID=cds-WP_001285726.1;Parent=gene-CCO46_RS22175;Dbxref=GenBank:WP_001285726.1;Name=WP_001285726.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=CCO46_RS22175;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285726.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 26680 27939 . - . ID=gene-CCO46_RS22180;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=CCO46_RS22180;old_locus_tag=CCO46_22165 NZ_NPOH01000024.1 Protein Homology CDS 26680 27939 . - 0 ID=cds-WP_000667143.1;Parent=gene-CCO46_RS22180;Dbxref=GenBank:WP_000667143.1;Name=WP_000667143.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=CCO46_RS22180;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667143.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 27929 29557 . - . ID=gene-CCO46_RS22185;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=CCO46_RS22185;old_locus_tag=CCO46_22170 NZ_NPOH01000024.1 Protein Homology CDS 27929 29557 . - 0 ID=cds-WP_058331721.1;Parent=gene-CCO46_RS22185;Dbxref=GenBank:WP_058331721.1;Name=WP_058331721.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=CCO46_RS22185;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_058331721.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 29830 31188 . + . ID=gene-CCO46_RS22190;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CCO46_RS22190;old_locus_tag=CCO46_22175 NZ_NPOH01000024.1 Protein Homology CDS 29830 31188 . + 0 ID=cds-WP_000948739.1;Parent=gene-CCO46_RS22190;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=CCO46_RS22190;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 31193 32263 . + . ID=gene-CCO46_RS22195;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=CCO46_RS22195;old_locus_tag=CCO46_22180 NZ_NPOH01000024.1 Protein Homology CDS 31193 32263 . + 0 ID=cds-WP_000858952.1;Parent=gene-CCO46_RS22195;Dbxref=GenBank:WP_000858952.1;Name=WP_000858952.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=CCO46_RS22195;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858952.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 32379 33257 . - . ID=gene-CCO46_RS22200;Name=CCO46_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22200;old_locus_tag=CCO46_22185 NZ_NPOH01000024.1 Protein Homology CDS 32379 33257 . - 0 ID=cds-WP_058332007.1;Parent=gene-CCO46_RS22200;Dbxref=GenBank:WP_058332007.1;Name=WP_058332007.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=CCO46_RS22200;product=LysR family transcriptional regulator;protein_id=WP_058332007.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 33419 34609 . + . ID=gene-CCO46_RS22205;Name=CCO46_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22205;old_locus_tag=CCO46_22190 NZ_NPOH01000024.1 Protein Homology CDS 33419 34609 . + 0 ID=cds-WP_000660250.1;Parent=gene-CCO46_RS22205;Dbxref=GenBank:WP_000660250.1;Name=WP_000660250.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=CCO46_RS22205;product=MFS transporter;protein_id=WP_000660250.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 34611 34865 . - . ID=gene-CCO46_RS22210;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=CCO46_RS22210;old_locus_tag=CCO46_22195 NZ_NPOH01000024.1 Protein Homology CDS 34611 34865 . - 0 ID=cds-WP_000533921.1;Parent=gene-CCO46_RS22210;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=CCO46_RS22210;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 34865 35995 . - . ID=gene-CCO46_RS22215;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=CCO46_RS22215;old_locus_tag=CCO46_22200 NZ_NPOH01000024.1 Protein Homology CDS 34865 35995 . - 0 ID=cds-WP_000332026.1;Parent=gene-CCO46_RS22215;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=CCO46_RS22215;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 36108 38393 . - . ID=gene-CCO46_RS22220;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=CCO46_RS22220;old_locus_tag=CCO46_22205 NZ_NPOH01000024.1 Protein Homology CDS 36108 38393 . - 0 ID=cds-WP_001076499.1;Parent=gene-CCO46_RS22220;Dbxref=GenBank:WP_001076499.1;Name=WP_001076499.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=CCO46_RS22220;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076499.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 38749 39477 . - . ID=gene-CCO46_RS22225;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=CCO46_RS22225;old_locus_tag=CCO46_22210 NZ_NPOH01000024.1 Protein Homology CDS 38749 39477 . - 0 ID=cds-WP_001091009.1;Parent=gene-CCO46_RS22225;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=CCO46_RS22225;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 39560 40444 . - . ID=gene-CCO46_RS22230;Name=CCO46_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22230;old_locus_tag=CCO46_22215 NZ_NPOH01000024.1 Protein Homology CDS 39560 40444 . - 0 ID=cds-WP_000944714.1;Parent=gene-CCO46_RS22230;Dbxref=GenBank:WP_000944714.1;Name=WP_000944714.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=CCO46_RS22230;product=GntR family transcriptional regulator;protein_id=WP_000944714.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 40494 41819 . + . ID=gene-CCO46_RS22235;Name=CCO46_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22235;old_locus_tag=CCO46_22220 NZ_NPOH01000024.1 Protein Homology CDS 40494 41819 . + 0 ID=cds-WP_058332008.1;Parent=gene-CCO46_RS22235;Dbxref=GenBank:WP_058332008.1;Name=WP_058332008.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=CCO46_RS22235;product=MFS transporter;protein_id=WP_058332008.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 41834 43036 . + . ID=gene-CCO46_RS22240;Name=CCO46_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22240;old_locus_tag=CCO46_22225 NZ_NPOH01000024.1 Protein Homology CDS 41834 43036 . + 0 ID=cds-WP_000705581.1;Parent=gene-CCO46_RS22240;Dbxref=GenBank:WP_000705581.1;Name=WP_000705581.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=CCO46_RS22240;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705581.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 43446 46082 . + . ID=gene-CCO46_RS22250;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CCO46_RS22250;old_locus_tag=CCO46_22235 NZ_NPOH01000024.1 Protein Homology CDS 43446 46082 . + 0 ID=cds-WP_001281271.1;Parent=gene-CCO46_RS22250;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=CCO46_RS22250;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 46200 49046 . + . ID=gene-CCO46_RS22255;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=CCO46_RS22255;old_locus_tag=CCO46_22240 NZ_NPOH01000024.1 Protein Homology CDS 46200 49046 . + 0 ID=cds-WP_000876084.1;Parent=gene-CCO46_RS22255;Dbxref=GenBank:WP_000876084.1;Name=WP_000876084.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=CCO46_RS22255;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876084.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 49149 49799 . - . ID=gene-CCO46_RS22260;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=CCO46_RS22260;old_locus_tag=CCO46_22245 NZ_NPOH01000024.1 Protein Homology CDS 49149 49799 . - 0 ID=cds-WP_001061919.1;Parent=gene-CCO46_RS22260;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=CCO46_RS22260;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 49816 52485 . - . ID=gene-CCO46_RS22265;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=CCO46_RS22265;old_locus_tag=CCO46_22250 NZ_NPOH01000024.1 Protein Homology CDS 49816 52485 . - 0 ID=cds-WP_000083201.1;Parent=gene-CCO46_RS22265;Dbxref=GenBank:WP_000083201.1;Name=WP_000083201.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=CCO46_RS22265;product=phosphotransferase RcsD;protein_id=WP_000083201.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 53214 54350 . + . ID=gene-CCO46_RS22275;Name=CCO46_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22275;old_locus_tag=CCO46_22260 NZ_NPOH01000024.1 Protein Homology CDS 53214 54350 . + 0 ID=cds-WP_000865526.1;Parent=gene-CCO46_RS22275;Dbxref=GenBank:WP_000865526.1;Name=WP_000865526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=CCO46_RS22275;product=porin OmpC;protein_id=WP_000865526.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 54465 55517 . + . ID=gene-CCO46_RS22280;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=CCO46_RS22280;old_locus_tag=CCO46_22265 NZ_NPOH01000024.1 Protein Homology CDS 54465 55517 . + 0 ID=cds-WP_000784301.1;Parent=gene-CCO46_RS22280;Dbxref=GenBank:WP_000784301.1;Name=WP_000784301.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=CCO46_RS22280;product=FAD:protein FMN transferase ApbE;protein_id=WP_000784301.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 55598 56659 . + . ID=gene-CCO46_RS22285;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=CCO46_RS22285;old_locus_tag=CCO46_22270 NZ_NPOH01000024.1 Protein Homology CDS 55598 56659 . + 0 ID=cds-WP_000975984.1;Parent=gene-CCO46_RS22285;Dbxref=GenBank:WP_000975984.1;Name=WP_000975984.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=CCO46_RS22285;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000975984.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 56662 57312 . + . ID=gene-CCO46_RS22290;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=CCO46_RS22290;old_locus_tag=CCO46_22275 NZ_NPOH01000024.1 Protein Homology CDS 56662 57312 . + 0 ID=cds-WP_094887623.1;Parent=gene-CCO46_RS22290;Dbxref=GenBank:WP_094887623.1;Name=WP_094887623.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=CCO46_RS22290;product=DNA oxidative demethylase AlkB;protein_id=WP_094887623.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 57388 59031 . + . ID=gene-CCO46_RS22295;Name=CCO46_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22295;old_locus_tag=CCO46_22280 NZ_NPOH01000024.1 Protein Homology CDS 57388 59031 . + 0 ID=cds-WP_000421584.1;Parent=gene-CCO46_RS22295;Dbxref=GenBank:WP_000421584.1;Name=WP_000421584.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=CCO46_RS22295;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_000421584.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 59223 59717 . - . ID=gene-CCO46_RS22300;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=CCO46_RS22300;old_locus_tag=CCO46_22285 NZ_NPOH01000024.1 Protein Homology CDS 59223 59717 . - 0 ID=cds-WP_001550295.1;Parent=gene-CCO46_RS22300;Dbxref=GenBank:WP_001550295.1;Name=WP_001550295.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=CCO46_RS22300;product=serine protease inhibitor ecotin;protein_id=WP_001550295.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 60131 60622 . + . ID=gene-CCO46_RS22305;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=CCO46_RS22305;old_locus_tag=CCO46_22290 NZ_NPOH01000024.1 Protein Homology CDS 60131 60622 . + 0 ID=cds-WP_000228064.1;Parent=gene-CCO46_RS22305;Dbxref=GenBank:WP_000228064.1;Name=WP_000228064.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=CCO46_RS22305;product=ferredoxin-type protein NapF;protein_id=WP_000228064.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 60612 60875 . + . ID=gene-CCO46_RS22310;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=CCO46_RS22310;old_locus_tag=CCO46_22295 NZ_NPOH01000024.1 Protein Homology CDS 60612 60875 . + 0 ID=cds-WP_001260058.1;Parent=gene-CCO46_RS22310;Dbxref=GenBank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=CCO46_RS22310;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 60872 63358 . + . ID=gene-CCO46_RS22315;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=CCO46_RS22315;old_locus_tag=CCO46_22300 NZ_NPOH01000024.1 Protein Homology CDS 60872 63358 . + 0 ID=cds-WP_058332011.1;Parent=gene-CCO46_RS22315;Dbxref=GenBank:WP_058332011.1;Name=WP_058332011.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=CCO46_RS22315;product=nitrate reductase catalytic subunit NapA;protein_id=WP_058332011.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 63365 64060 . + . ID=gene-CCO46_RS22320;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=CCO46_RS22320;old_locus_tag=CCO46_22305 NZ_NPOH01000024.1 Protein Homology CDS 63365 64060 . + 0 ID=cds-WP_000091679.1;Parent=gene-CCO46_RS22320;Dbxref=GenBank:WP_000091679.1;Name=WP_000091679.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=CCO46_RS22320;product=ferredoxin-type protein NapG;protein_id=WP_000091679.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 64047 64916 . + . ID=gene-CCO46_RS22325;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=CCO46_RS22325;old_locus_tag=CCO46_22310 NZ_NPOH01000024.1 Protein Homology CDS 64047 64916 . + 0 ID=cds-WP_000013528.1;Parent=gene-CCO46_RS22325;Dbxref=GenBank:WP_000013528.1;Name=WP_000013528.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=CCO46_RS22325;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013528.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 65032 65481 . + . ID=gene-CCO46_RS22330;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=CCO46_RS22330;old_locus_tag=CCO46_22315 NZ_NPOH01000024.1 Protein Homology CDS 65032 65481 . + 0 ID=cds-WP_000835182.1;Parent=gene-CCO46_RS22330;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=CCO46_RS22330;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 65491 66093 . + . ID=gene-CCO46_RS22335;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=CCO46_RS22335;old_locus_tag=CCO46_22320 NZ_NPOH01000024.1 Protein Homology CDS 65491 66093 . + 0 ID=cds-WP_000431778.1;Parent=gene-CCO46_RS22335;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=CCO46_RS22335;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11 NZ_NPOH01000024.1 RefSeq gene 66114 66614 . + . ID=gene-CCO46_RS22340;Name=ccmA;end_range=66614,.;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO46_RS22340;old_locus_tag=CCO46_22325;partial=true NZ_NPOH01000024.1 Protein Homology CDS 66114 66614 . + 0 ID=cds-WP_097363511.1;Parent=gene-CCO46_RS22340;Dbxref=GenBank:WP_097363511.1;Name=WP_097363511.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;end_range=66614,.;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=CCO46_RS22340;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_097363511.1;transl_table=11 ##sequence-region NZ_NPOH01000025.1 1 65954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000025.1 RefSeq region 1 65954 . + . ID=NZ_NPOH01000025.1:1..65954;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000025.1 RefSeq gene 1 187 . + . ID=gene-CCO46_RS25600;Name=CCO46_RS25600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25600;partial=true;start_range=.,1 NZ_NPOH01000025.1 GeneMarkS-2+ CDS 1 187 . + 1 ID=cds-WP_272897644.1;Parent=gene-CCO46_RS25600;Dbxref=GenBank:WP_272897644.1;Name=WP_272897644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25600;partial=true;product=hypothetical protein;protein_id=WP_272897644.1;start_range=.,1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 490 1896 . + . ID=gene-CCO46_RS22350;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=CCO46_RS22350;old_locus_tag=CCO46_22335 NZ_NPOH01000025.1 Protein Homology CDS 490 1896 . + 0 ID=cds-WP_001258803.1;Parent=gene-CCO46_RS22350;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=CCO46_RS22350;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 1946 2278 . + . ID=gene-CCO46_RS22355;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=CCO46_RS22355;old_locus_tag=CCO46_22340 NZ_NPOH01000025.1 Protein Homology CDS 1946 2278 . + 0 ID=cds-WP_000722260.1;Parent=gene-CCO46_RS22355;Dbxref=GenBank:WP_000722260.1;Name=WP_000722260.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=CCO46_RS22355;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722260.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 2327 3631 . - . ID=gene-CCO46_RS22360;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=CCO46_RS22360;old_locus_tag=CCO46_22345 NZ_NPOH01000025.1 Protein Homology CDS 2327 3631 . - 0 ID=cds-WP_094894410.1;Parent=gene-CCO46_RS22360;Dbxref=GenBank:WP_094894410.1;Name=WP_094894410.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=CCO46_RS22360;product=tricarballylate/proton symporter TcuC;protein_id=WP_094894410.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 3682 4821 . - . ID=gene-CCO46_RS22365;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=CCO46_RS22365;old_locus_tag=CCO46_22350 NZ_NPOH01000025.1 Protein Homology CDS 3682 4821 . - 0 ID=cds-WP_000811146.1;Parent=gene-CCO46_RS22365;Dbxref=GenBank:WP_000811146.1;Name=WP_000811146.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=CCO46_RS22365;product=tricarballylate utilization protein TcuB;protein_id=WP_000811146.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 4808 6211 . - . ID=gene-CCO46_RS22370;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=CCO46_RS22370;old_locus_tag=CCO46_22355 NZ_NPOH01000025.1 Protein Homology CDS 4808 6211 . - 0 ID=cds-WP_000228705.1;Parent=gene-CCO46_RS22370;Dbxref=GenBank:WP_000228705.1;Name=WP_000228705.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=CCO46_RS22370;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228705.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 6309 7235 . - . ID=gene-CCO46_RS22375;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=CCO46_RS22375;old_locus_tag=CCO46_22360 NZ_NPOH01000025.1 Protein Homology CDS 6309 7235 . - 0 ID=cds-WP_000423371.1;Parent=gene-CCO46_RS22375;Dbxref=GenBank:WP_000423371.1;Name=WP_000423371.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=CCO46_RS22375;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423371.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 7350 7802 . - . ID=gene-CCO46_RS22380;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CCO46_RS22380;old_locus_tag=CCO46_22365 NZ_NPOH01000025.1 Protein Homology CDS 7350 7802 . - 0 ID=cds-WP_000131699.1;Parent=gene-CCO46_RS22380;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=CCO46_RS22380;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11 NZ_NPOH01000025.1 RefSeq pseudogene 7795 7880 . - . ID=gene-CCO46_RS25335;Name=CCO46_RS25335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25335;pseudo=true NZ_NPOH01000025.1 Protein Homology CDS 7795 7880 . - 0 ID=cds-CCO46_RS25335;Parent=gene-CCO46_RS25335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=CCO46_RS25335;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 8084 8614 . - . ID=gene-CCO46_RS22385;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=CCO46_RS22385;old_locus_tag=CCO46_22370 NZ_NPOH01000025.1 Protein Homology CDS 8084 8614 . - 0 ID=cds-WP_001018621.1;Parent=gene-CCO46_RS22385;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=CCO46_RS22385;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 8765 9058 . - . ID=gene-CCO46_RS22390;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=CCO46_RS22390;old_locus_tag=CCO46_22375 NZ_NPOH01000025.1 Protein Homology CDS 8765 9058 . - 0 ID=cds-WP_001040939.1;Parent=gene-CCO46_RS22390;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=CCO46_RS22390;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 9192 9962 . - . ID=gene-CCO46_RS22395;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=CCO46_RS22395;old_locus_tag=CCO46_22380 NZ_NPOH01000025.1 Protein Homology CDS 9192 9962 . - 0 ID=cds-WP_000773245.1;Parent=gene-CCO46_RS22395;Dbxref=GenBank:WP_000773245.1;Name=WP_000773245.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=CCO46_RS22395;product=esterase;protein_id=WP_000773245.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 10147 10689 . + . ID=gene-CCO46_RS22400;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=CCO46_RS22400;old_locus_tag=CCO46_22385 NZ_NPOH01000025.1 Protein Homology CDS 10147 10689 . + 0 ID=cds-WP_000848395.1;Parent=gene-CCO46_RS22400;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=CCO46_RS22400;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 10714 12354 . + . ID=gene-CCO46_RS22405;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=CCO46_RS22405;old_locus_tag=CCO46_22390 NZ_NPOH01000025.1 Protein Homology CDS 10714 12354 . + 0 ID=cds-WP_053299976.1;Parent=gene-CCO46_RS22405;Dbxref=GenBank:WP_053299976.1;Name=WP_053299976.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=CCO46_RS22405;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_053299976.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 12469 12954 . - . ID=gene-CCO46_RS22410;Name=CCO46_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22410;old_locus_tag=CCO46_22395 NZ_NPOH01000025.1 Protein Homology CDS 12469 12954 . - 0 ID=cds-WP_000070053.1;Parent=gene-CCO46_RS22410;Dbxref=GenBank:WP_000070053.1;Name=WP_000070053.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=CCO46_RS22410;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070053.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 13019 14338 . - . ID=gene-CCO46_RS22415;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=CCO46_RS22415;old_locus_tag=CCO46_22400 NZ_NPOH01000025.1 Protein Homology CDS 13019 14338 . - 0 ID=cds-WP_000042658.1;Parent=gene-CCO46_RS22415;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=CCO46_RS22415;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 14335 16533 . - . ID=gene-CCO46_RS22420;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=CCO46_RS22420;old_locus_tag=CCO46_22405 NZ_NPOH01000025.1 Protein Homology CDS 14335 16533 . - 0 ID=cds-WP_001292402.1;Parent=gene-CCO46_RS22420;Dbxref=GenBank:WP_001292402.1;Name=WP_001292402.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=CCO46_RS22420;product=ornithine decarboxylase SpeF;protein_id=WP_001292402.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 16913 17017 . - . ID=gene-CCO46_RS25070;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=CCO46_RS25070 NZ_NPOH01000025.1 Protein Homology CDS 16913 17017 . - 0 ID=cds-WP_015632840.1;Parent=gene-CCO46_RS25070;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=CCO46_RS25070;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 17295 17972 . - . ID=gene-CCO46_RS22425;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=CCO46_RS22425;old_locus_tag=CCO46_22410 NZ_NPOH01000025.1 Protein Homology CDS 17295 17972 . - 0 ID=cds-WP_000186053.1;Parent=gene-CCO46_RS22425;Dbxref=GenBank:WP_000186053.1;Name=WP_000186053.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=CCO46_RS22425;product=two-component system response regulator KdpE;protein_id=WP_000186053.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 17969 20653 . - . ID=gene-CCO46_RS22430;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=CCO46_RS22430;old_locus_tag=CCO46_22415 NZ_NPOH01000025.1 Protein Homology CDS 17969 20653 . - 0 ID=cds-WP_080160314.1;Parent=gene-CCO46_RS22430;Dbxref=GenBank:WP_080160314.1;Name=WP_080160314.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=CCO46_RS22430;product=two-component system sensor histidine kinase KdpD;protein_id=WP_080160314.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 20650 21234 . - . ID=gene-CCO46_RS22435;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CCO46_RS22435;old_locus_tag=CCO46_22420 NZ_NPOH01000025.1 Protein Homology CDS 20650 21234 . - 0 ID=cds-WP_001534231.1;Parent=gene-CCO46_RS22435;Dbxref=GenBank:WP_001534231.1;Name=WP_001534231.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=CCO46_RS22435;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_001534231.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 21243 23291 . - . ID=gene-CCO46_RS22440;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CCO46_RS22440;old_locus_tag=CCO46_22425 NZ_NPOH01000025.1 Protein Homology CDS 21243 23291 . - 0 ID=cds-WP_000088034.1;Parent=gene-CCO46_RS22440;Dbxref=GenBank:WP_000088034.1;Name=WP_000088034.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=CCO46_RS22440;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000088034.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 23312 24991 . - . ID=gene-CCO46_RS22445;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CCO46_RS22445;old_locus_tag=CCO46_22430 NZ_NPOH01000025.1 Protein Homology CDS 23312 24991 . - 0 ID=cds-WP_000730078.1;Parent=gene-CCO46_RS22445;Dbxref=GenBank:WP_000730078.1;Name=WP_000730078.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=CCO46_RS22445;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000730078.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 24991 25080 . - . ID=gene-CCO46_RS22450;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CCO46_RS22450;old_locus_tag=CCO46_22435 NZ_NPOH01000025.1 Protein Homology CDS 24991 25080 . - 0 ID=cds-WP_001670793.1;Parent=gene-CCO46_RS22450;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=CCO46_RS22450;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 25417 25623 . + . ID=gene-CCO46_RS22455;Name=CCO46_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22455;old_locus_tag=CCO46_22440 NZ_NPOH01000025.1 Protein Homology CDS 25417 25623 . + 0 ID=cds-WP_000401433.1;Parent=gene-CCO46_RS22455;Dbxref=GenBank:WP_000401433.1;Name=WP_000401433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=CCO46_RS22455;product=YbfA family protein;protein_id=WP_000401433.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 25734 27155 . + . ID=gene-CCO46_RS22460;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=CCO46_RS22460;old_locus_tag=CCO46_22445 NZ_NPOH01000025.1 Protein Homology CDS 25734 27155 . + 0 ID=cds-WP_058331927.1;Parent=gene-CCO46_RS22460;Dbxref=GenBank:WP_058331927.1;Name=WP_058331927.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465559.1;locus_tag=CCO46_RS22460;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_058331927.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 27194 28675 . - . ID=gene-CCO46_RS22465;Name=CCO46_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22465;old_locus_tag=CCO46_22450 NZ_NPOH01000025.1 Protein Homology CDS 27194 28675 . - 0 ID=cds-WP_001041123.1;Parent=gene-CCO46_RS22465;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=CCO46_RS22465;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 29004 29747 . + . ID=gene-CCO46_RS22475;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=CCO46_RS22475;old_locus_tag=CCO46_22460 NZ_NPOH01000025.1 Protein Homology CDS 29004 29747 . + 0 ID=cds-WP_000798844.1;Parent=gene-CCO46_RS22475;Dbxref=GenBank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=CCO46_RS22475;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 29763 30419 . + . ID=gene-CCO46_RS22480;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CCO46_RS22480;old_locus_tag=CCO46_22465 NZ_NPOH01000025.1 Protein Homology CDS 29763 30419 . + 0 ID=cds-WP_001188371.1;Parent=gene-CCO46_RS22480;Dbxref=GenBank:WP_001188371.1;Name=WP_001188371.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=CCO46_RS22480;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188371.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 30413 31345 . + . ID=gene-CCO46_RS22485;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=CCO46_RS22485;old_locus_tag=CCO46_22470 NZ_NPOH01000025.1 Protein Homology CDS 30413 31345 . + 0 ID=cds-WP_000932043.1;Parent=gene-CCO46_RS22485;Dbxref=GenBank:WP_000932043.1;Name=WP_000932043.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=CCO46_RS22485;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932043.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 31335 32069 . + . ID=gene-CCO46_RS22490;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CCO46_RS22490;old_locus_tag=CCO46_22475 NZ_NPOH01000025.1 Protein Homology CDS 31335 32069 . + 0 ID=cds-WP_017441681.1;Parent=gene-CCO46_RS22490;Dbxref=GenBank:WP_017441681.1;Name=WP_017441681.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=CCO46_RS22490;product=5-oxoprolinase subunit PxpA;protein_id=WP_017441681.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 32393 32524 . + . ID=gene-CCO46_RS22495;Name=CCO46_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22495;old_locus_tag=CCO46_22480 NZ_NPOH01000025.1 Protein Homology CDS 32393 32524 . + 0 ID=cds-WP_001521652.1;Parent=gene-CCO46_RS22495;Dbxref=GenBank:WP_001521652.1;Name=WP_001521652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=CCO46_RS22495;product=hypothetical protein;protein_id=WP_001521652.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 32584 33150 . + . ID=gene-CCO46_RS22500;Name=CCO46_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22500;old_locus_tag=CCO46_22485 NZ_NPOH01000025.1 Protein Homology CDS 32584 33150 . + 0 ID=cds-WP_000824704.1;Parent=gene-CCO46_RS22500;Dbxref=GenBank:WP_000824704.1;Name=WP_000824704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459701.1;locus_tag=CCO46_RS22500;product=tyrosine-type DNA invertase;protein_id=WP_000824704.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 33610 33945 . + . ID=gene-CCO46_RS22505;Name=CCO46_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22505;old_locus_tag=CCO46_22490 NZ_NPOH01000025.1 Protein Homology CDS 33610 33945 . + 0 ID=cds-WP_097363512.1;Parent=gene-CCO46_RS22505;Dbxref=GenBank:WP_097363512.1;Name=WP_097363512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=CCO46_RS22505;product=hypothetical protein;protein_id=WP_097363512.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 33947 34687 . + . ID=gene-CCO46_RS22510;Name=CCO46_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22510;old_locus_tag=CCO46_22495 NZ_NPOH01000025.1 Protein Homology CDS 33947 34687 . + 0 ID=cds-WP_001194237.1;Parent=gene-CCO46_RS22510;Dbxref=GenBank:WP_001194237.1;Name=WP_001194237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459703.1;locus_tag=CCO46_RS22510;product=hypothetical protein;protein_id=WP_001194237.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 34973 36124 . + . ID=gene-CCO46_RS22515;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=CCO46_RS22515;old_locus_tag=CCO46_22500 NZ_NPOH01000025.1 Protein Homology CDS 34973 36124 . + 0 ID=cds-WP_080160315.1;Parent=gene-CCO46_RS22515;Dbxref=GenBank:WP_080160315.1;Name=WP_080160315.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=CCO46_RS22515;product=UDP-galactopyranose mutase;protein_id=WP_080160315.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 36121 37017 . + . ID=gene-CCO46_RS22520;Name=CCO46_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22520;old_locus_tag=CCO46_22505 NZ_NPOH01000025.1 Protein Homology CDS 36121 37017 . + 0 ID=cds-WP_170947421.1;Parent=gene-CCO46_RS22520;Dbxref=GenBank:WP_170947421.1;Name=WP_170947421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459705.1;locus_tag=CCO46_RS22520;product=glycosyltransferase;protein_id=WP_170947421.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 37030 38163 . + . ID=gene-CCO46_RS22525;Name=CCO46_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22525;old_locus_tag=CCO46_22510 NZ_NPOH01000025.1 Protein Homology CDS 37030 38163 . + 0 ID=cds-WP_080160316.1;Parent=gene-CCO46_RS22525;Dbxref=GenBank:WP_080160316.1;Name=WP_080160316.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459706.1;locus_tag=CCO46_RS22525;product=glycosyltransferase family 4 protein;protein_id=WP_080160316.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 38292 39062 . + . ID=gene-CCO46_RS22530;Name=CCO46_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22530;old_locus_tag=CCO46_22515 NZ_NPOH01000025.1 Protein Homology CDS 38292 39062 . + 0 ID=cds-WP_000998823.1;Parent=gene-CCO46_RS22530;Dbxref=GenBank:WP_000998823.1;Name=WP_000998823.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=CCO46_RS22530;product=ABC transporter permease;protein_id=WP_000998823.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 39066 39776 . + . ID=gene-CCO46_RS22535;Name=CCO46_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22535;old_locus_tag=CCO46_22520 NZ_NPOH01000025.1 Protein Homology CDS 39066 39776 . + 0 ID=cds-WP_000702849.1;Parent=gene-CCO46_RS22535;Dbxref=GenBank:WP_000702849.1;Name=WP_000702849.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=CCO46_RS22535;product=ABC transporter ATP-binding protein;protein_id=WP_000702849.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 39870 41648 . + . ID=gene-CCO46_RS22540;Name=CCO46_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22540;old_locus_tag=CCO46_22525 NZ_NPOH01000025.1 Protein Homology CDS 39870 41648 . + 0 ID=cds-WP_097363514.1;Parent=gene-CCO46_RS22540;Dbxref=GenBank:WP_097363514.1;Name=WP_097363514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=CCO46_RS22540;product=glycosyltransferase;protein_id=WP_097363514.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 41841 42674 . + . ID=gene-CCO46_RS22545;Name=CCO46_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22545;old_locus_tag=CCO46_22530 NZ_NPOH01000025.1 Protein Homology CDS 41841 42674 . + 0 ID=cds-WP_094887662.1;Parent=gene-CCO46_RS22545;Dbxref=GenBank:WP_094887662.1;Name=WP_094887662.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=CCO46_RS22545;product=glycosyltransferase family A protein;protein_id=WP_094887662.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 42732 44627 . + . ID=gene-CCO46_RS22550;Name=CCO46_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22550;old_locus_tag=CCO46_22535 NZ_NPOH01000025.1 Protein Homology CDS 42732 44627 . + 0 ID=cds-WP_078057700.1;Parent=gene-CCO46_RS22550;Dbxref=GenBank:WP_078057700.1;Name=WP_078057700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=CCO46_RS22550;product=HAD family hydrolase;protein_id=WP_078057700.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 44695 44832 . + . ID=gene-CCO46_RS22555;Name=CCO46_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22555;old_locus_tag=CCO46_22540 NZ_NPOH01000025.1 Protein Homology CDS 44695 44832 . + 0 ID=cds-WP_001145917.1;Parent=gene-CCO46_RS22555;Dbxref=GenBank:WP_001145917.1;Name=WP_001145917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459712.1;locus_tag=CCO46_RS22555;product=hypothetical protein;protein_id=WP_001145917.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 44881 45672 . + . ID=gene-CCO46_RS22560;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=CCO46_RS22560;old_locus_tag=CCO46_22545 NZ_NPOH01000025.1 Protein Homology CDS 44881 45672 . + 0 ID=cds-WP_076726286.1;Parent=gene-CCO46_RS22560;Dbxref=GenBank:WP_076726286.1;Name=WP_076726286.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=CCO46_RS22560;product=endonuclease VIII;protein_id=WP_076726286.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 45727 46773 . - . ID=gene-CCO46_RS22565;Name=CCO46_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22565;old_locus_tag=CCO46_22550 NZ_NPOH01000025.1 Protein Homology CDS 45727 46773 . - 0 ID=cds-WP_080207847.1;Parent=gene-CCO46_RS22565;Dbxref=GenBank:WP_080207847.1;Name=WP_080207847.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=CCO46_RS22565;product=AbrB family transcriptional regulator;protein_id=WP_080207847.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 46910 48193 . - . ID=gene-CCO46_RS22570;Name=CCO46_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22570;old_locus_tag=CCO46_22555 NZ_NPOH01000025.1 Protein Homology CDS 46910 48193 . - 0 ID=cds-WP_023203106.1;Parent=gene-CCO46_RS22570;Dbxref=GenBank:WP_023203106.1;Name=WP_023203106.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=CCO46_RS22570;product=citrate synthase;protein_id=WP_023203106.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 48419 48550 . - . ID=gene-CCO46_RS25930;Name=CCO46_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25930 NZ_NPOH01000025.1 Protein Homology CDS 48419 48550 . - 0 ID=cds-WP_418142699.1;Parent=gene-CCO46_RS25930;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=CCO46_RS25930;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 48933 49337 . + . ID=gene-CCO46_RS22585;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=CCO46_RS22585;old_locus_tag=CCO46_22570 NZ_NPOH01000025.1 Protein Homology CDS 48933 49337 . + 0 ID=cds-WP_000263340.1;Parent=gene-CCO46_RS22585;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=CCO46_RS22585;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 49331 49678 . + . ID=gene-CCO46_RS22590;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=CCO46_RS22590;old_locus_tag=CCO46_22575 NZ_NPOH01000025.1 Protein Homology CDS 49331 49678 . + 0 ID=cds-WP_000254356.1;Parent=gene-CCO46_RS22590;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=CCO46_RS22590;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 49678 51444 . + . ID=gene-CCO46_RS22595;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CCO46_RS22595;old_locus_tag=CCO46_22580 NZ_NPOH01000025.1 Protein Homology CDS 49678 51444 . + 0 ID=cds-WP_000775561.1;Parent=gene-CCO46_RS22595;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=CCO46_RS22595;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 51461 52177 . + . ID=gene-CCO46_RS22600;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CCO46_RS22600;old_locus_tag=CCO46_22585 NZ_NPOH01000025.1 Protein Homology CDS 51461 52177 . + 0 ID=cds-WP_001537859.1;Parent=gene-CCO46_RS22600;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=CCO46_RS22600;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 52701 55502 . + . ID=gene-CCO46_RS22605;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=CCO46_RS22605;old_locus_tag=CCO46_22590 NZ_NPOH01000025.1 Protein Homology CDS 52701 55502 . + 0 ID=cds-WP_001181500.1;Parent=gene-CCO46_RS22605;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=CCO46_RS22605;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 55517 56725 . + . ID=gene-CCO46_RS22610;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=CCO46_RS22610;old_locus_tag=CCO46_22595 NZ_NPOH01000025.1 Protein Homology CDS 55517 56725 . + 0 ID=cds-WP_000099858.1;Parent=gene-CCO46_RS22610;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=CCO46_RS22610;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 56867 58033 . + . ID=gene-CCO46_RS22615;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CCO46_RS22615;old_locus_tag=CCO46_22600 NZ_NPOH01000025.1 Protein Homology CDS 56867 58033 . + 0 ID=cds-WP_001048590.1;Parent=gene-CCO46_RS22615;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=CCO46_RS22615;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 58033 58902 . + . ID=gene-CCO46_RS22620;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CCO46_RS22620;old_locus_tag=CCO46_22605 NZ_NPOH01000025.1 Protein Homology CDS 58033 58902 . + 0 ID=cds-WP_000114633.1;Parent=gene-CCO46_RS22620;Dbxref=GenBank:WP_000114633.1;Name=WP_000114633.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=CCO46_RS22620;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114633.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 60485 62053 . + . ID=gene-CCO46_RS22625;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=CCO46_RS22625;old_locus_tag=CCO46_22610 NZ_NPOH01000025.1 Protein Homology CDS 60485 62053 . + 0 ID=cds-WP_000884369.1;Parent=gene-CCO46_RS22625;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=CCO46_RS22625;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 62069 63208 . + . ID=gene-CCO46_RS22630;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO46_RS22630;old_locus_tag=CCO46_22615 NZ_NPOH01000025.1 Protein Homology CDS 62069 63208 . + 0 ID=cds-WP_000568258.1;Parent=gene-CCO46_RS22630;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=CCO46_RS22630;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 63223 63336 . + . ID=gene-CCO46_RS22635;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=CCO46_RS22635;old_locus_tag=CCO46_22620 NZ_NPOH01000025.1 Protein Homology CDS 63223 63336 . + 0 ID=cds-WP_000270278.1;Parent=gene-CCO46_RS22635;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=CCO46_RS22635;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 63336 63629 . + . ID=gene-CCO46_RS22640;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=CCO46_RS22640;old_locus_tag=CCO46_22625 NZ_NPOH01000025.1 Protein Homology CDS 63336 63629 . + 0 ID=cds-WP_000148790.1;Parent=gene-CCO46_RS22640;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=CCO46_RS22640;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 63858 64262 . + . ID=gene-CCO46_RS22645;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=CCO46_RS22645;old_locus_tag=CCO46_22630 NZ_NPOH01000025.1 Protein Homology CDS 63858 64262 . + 0 ID=cds-WP_001046240.1;Parent=gene-CCO46_RS22645;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=CCO46_RS22645;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 64259 64951 . + . ID=gene-CCO46_RS22650;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=CCO46_RS22650;old_locus_tag=CCO46_22635 NZ_NPOH01000025.1 Protein Homology CDS 64259 64951 . + 0 ID=cds-WP_000131318.1;Parent=gene-CCO46_RS22650;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=CCO46_RS22650;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 64955 65383 . + . ID=gene-CCO46_RS22655;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=CCO46_RS22655;old_locus_tag=CCO46_22640 NZ_NPOH01000025.1 Protein Homology CDS 64955 65383 . + 0 ID=cds-WP_000124676.1;Parent=gene-CCO46_RS22655;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=CCO46_RS22655;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11 NZ_NPOH01000025.1 RefSeq gene 65448 65954 . + . ID=gene-CCO46_RS22660;Name=tolA;end_range=65954,.;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=CCO46_RS22660;old_locus_tag=CCO46_22645;partial=true NZ_NPOH01000025.1 Protein Homology CDS 65448 65954 . + 0 ID=cds-WP_097363515.1;Parent=gene-CCO46_RS22660;Dbxref=GenBank:WP_097363515.1;Name=WP_097363515.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;end_range=65954,.;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=CCO46_RS22660;partial=true;product=cell envelope integrity protein TolA;protein_id=WP_097363515.1;transl_table=11 ##sequence-region NZ_NPOH01000026.1 1 45704 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000026.1 RefSeq region 1 45704 . + . ID=NZ_NPOH01000026.1:1..45704;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000026.1 RefSeq gene 8 123 . + . ID=gene-CCO46_RS22665;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO46_RS22665;old_locus_tag=CCO46_22650 NZ_NPOH01000026.1 cmsearch rRNA 8 123 . + . ID=rna-CCO46_RS22665;Parent=gene-CCO46_RS22665;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS22665;product=5S ribosomal RNA NZ_NPOH01000026.1 cmsearch exon 8 123 . + . ID=exon-CCO46_RS22665-1;Parent=rna-CCO46_RS22665;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS22665;product=5S ribosomal RNA NZ_NPOH01000026.1 RefSeq gene 315 391 . + . ID=gene-CCO46_RS22670;Name=CCO46_RS22670;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS22670;old_locus_tag=CCO46_22655 NZ_NPOH01000026.1 tRNAscan-SE tRNA 315 391 . + . ID=rna-CCO46_RS22670;Parent=gene-CCO46_RS22670;anticodon=(pos:349..351);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS22670;product=tRNA-Asp NZ_NPOH01000026.1 tRNAscan-SE exon 315 391 . + . ID=exon-CCO46_RS22670-1;Parent=rna-CCO46_RS22670;anticodon=(pos:349..351);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS22670;product=tRNA-Asp NZ_NPOH01000026.1 RefSeq gene 556 1359 . + . ID=gene-CCO46_RS22675;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=CCO46_RS22675;old_locus_tag=CCO46_22660 NZ_NPOH01000026.1 Protein Homology CDS 556 1359 . + 0 ID=cds-WP_058331249.1;Parent=gene-CCO46_RS22675;Dbxref=GenBank:WP_058331249.1;Name=WP_058331249.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=CCO46_RS22675;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_058331249.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 1381 2295 . - . ID=gene-CCO46_RS22680;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=CCO46_RS22680;old_locus_tag=CCO46_22665 NZ_NPOH01000026.1 Protein Homology CDS 1381 2295 . - 0 ID=cds-WP_000648534.1;Parent=gene-CCO46_RS22680;Dbxref=GenBank:WP_000648534.1;Name=WP_000648534.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=CCO46_RS22680;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648534.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 2400 3575 . + . ID=gene-CCO46_RS22685;Name=CCO46_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22685;old_locus_tag=CCO46_22670 NZ_NPOH01000026.1 Protein Homology CDS 2400 3575 . + 0 ID=cds-WP_058331250.1;Parent=gene-CCO46_RS22685;Dbxref=GenBank:WP_058331250.1;Name=WP_058331250.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=CCO46_RS22685;product=MFS transporter;protein_id=WP_058331250.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 3707 4507 . + . ID=gene-CCO46_RS22690;Name=CCO46_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22690;old_locus_tag=CCO46_22675 NZ_NPOH01000026.1 Protein Homology CDS 3707 4507 . + 0 ID=cds-WP_001230970.1;Parent=gene-CCO46_RS22690;Dbxref=GenBank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=CCO46_RS22690;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 4585 5355 . + . ID=gene-CCO46_RS22695;Name=CCO46_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22695;old_locus_tag=CCO46_22680 NZ_NPOH01000026.1 Protein Homology CDS 4585 5355 . + 0 ID=cds-WP_058331251.1;Parent=gene-CCO46_RS22695;Dbxref=GenBank:WP_058331251.1;Name=WP_058331251.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=CCO46_RS22695;product=class I SAM-dependent methyltransferase;protein_id=WP_058331251.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 5411 6778 . - . ID=gene-CCO46_RS22700;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=CCO46_RS22700;old_locus_tag=CCO46_22685 NZ_NPOH01000026.1 Protein Homology CDS 5411 6778 . - 0 ID=cds-WP_000644706.1;Parent=gene-CCO46_RS22700;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=CCO46_RS22700;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 6850 7605 . - . ID=gene-CCO46_RS22705;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=CCO46_RS22705;old_locus_tag=CCO46_22690 NZ_NPOH01000026.1 Protein Homology CDS 6850 7605 . - 0 ID=cds-WP_001052773.1;Parent=gene-CCO46_RS22705;Dbxref=GenBank:WP_001052773.1;Name=WP_001052773.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=CCO46_RS22705;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052773.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 7640 8362 . + . ID=gene-CCO46_RS22710;Name=CCO46_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22710;old_locus_tag=CCO46_22695 NZ_NPOH01000026.1 Protein Homology CDS 7640 8362 . + 0 ID=cds-WP_000801238.1;Parent=gene-CCO46_RS22710;Dbxref=GenBank:WP_000801238.1;Name=WP_000801238.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=CCO46_RS22710;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 8359 8826 . - . ID=gene-CCO46_RS22715;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=CCO46_RS22715;old_locus_tag=CCO46_22700 NZ_NPOH01000026.1 Protein Homology CDS 8359 8826 . - 0 ID=cds-WP_000917872.1;Parent=gene-CCO46_RS22715;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=CCO46_RS22715;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 8890 9621 . + . ID=gene-CCO46_RS22720;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=CCO46_RS22720;old_locus_tag=CCO46_22705 NZ_NPOH01000026.1 Protein Homology CDS 8890 9621 . + 0 ID=cds-WP_001670675.1;Parent=gene-CCO46_RS22720;Dbxref=GenBank:WP_001670675.1;Name=WP_001670675.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=CCO46_RS22720;product=DNA polymerase III subunit epsilon;protein_id=WP_001670675.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 9755 9831 . + . ID=gene-CCO46_RS22725;Name=CCO46_RS22725;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS22725;old_locus_tag=CCO46_22710 NZ_NPOH01000026.1 tRNAscan-SE tRNA 9755 9831 . + . ID=rna-CCO46_RS22725;Parent=gene-CCO46_RS22725;anticodon=(pos:9789..9791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS22725;product=tRNA-Asp NZ_NPOH01000026.1 tRNAscan-SE exon 9755 9831 . + . ID=exon-CCO46_RS22725-1;Parent=rna-CCO46_RS22725;anticodon=(pos:9789..9791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS22725;product=tRNA-Asp NZ_NPOH01000026.1 RefSeq gene 10151 11206 . - . ID=gene-CCO46_RS22730;Name=CCO46_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22730;old_locus_tag=CCO46_22715 NZ_NPOH01000026.1 Protein Homology CDS 10151 11206 . - 0 ID=cds-WP_000367619.1;Parent=gene-CCO46_RS22730;Dbxref=GenBank:WP_000367619.1;Name=WP_000367619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=CCO46_RS22730;product=ImpA family type VI secretion system protein;protein_id=WP_000367619.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 11217 12212 . - . ID=gene-CCO46_RS22735;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=CCO46_RS22735;old_locus_tag=CCO46_22720 NZ_NPOH01000026.1 Protein Homology CDS 11217 12212 . - 0 ID=cds-WP_039589904.1;Parent=gene-CCO46_RS22735;Dbxref=GenBank:WP_039589904.1;Name=WP_039589904.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=CCO46_RS22735;product=type VI secretion system baseplate subunit TssG;protein_id=WP_039589904.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 12209 14092 . - . ID=gene-CCO46_RS22740;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=CCO46_RS22740;old_locus_tag=CCO46_22725 NZ_NPOH01000026.1 Protein Homology CDS 12209 14092 . - 0 ID=cds-WP_000371506.1;Parent=gene-CCO46_RS22740;Dbxref=GenBank:WP_000371506.1;Name=WP_000371506.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=CCO46_RS22740;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000371506.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 14108 14602 . - . ID=gene-CCO46_RS22745;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=CCO46_RS22745;old_locus_tag=CCO46_22730 NZ_NPOH01000026.1 Protein Homology CDS 14108 14602 . - 0 ID=cds-WP_000108007.1;Parent=gene-CCO46_RS22745;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=CCO46_RS22745;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 14599 15423 . - . ID=gene-CCO46_RS22750;Name=CCO46_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22750;old_locus_tag=CCO46_22735 NZ_NPOH01000026.1 Protein Homology CDS 14599 15423 . - 0 ID=cds-WP_001647896.1;Parent=gene-CCO46_RS22750;Dbxref=GenBank:WP_001647896.1;Name=WP_001647896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=CCO46_RS22750;product=type VI secretion system accessory protein TagJ;protein_id=WP_001647896.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 15410 16312 . - . ID=gene-CCO46_RS22755;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=CCO46_RS22755;old_locus_tag=CCO46_22740 NZ_NPOH01000026.1 Protein Homology CDS 15410 16312 . - 0 ID=cds-WP_097363516.1;Parent=gene-CCO46_RS22755;Dbxref=GenBank:WP_097363516.1;Name=WP_097363516.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=CCO46_RS22755;product=type VI secretion system-associated protein TagK;protein_id=WP_097363516.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 16680 19319 . + . ID=gene-CCO46_RS22760;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=CCO46_RS22760;old_locus_tag=CCO46_22745 NZ_NPOH01000026.1 Protein Homology CDS 16680 19319 . + 0 ID=cds-WP_094964517.1;Parent=gene-CCO46_RS22760;Dbxref=GenBank:WP_094964517.1;Name=WP_094964517.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=CCO46_RS22760;product=type VI secretion system ATPase TssH;protein_id=WP_094964517.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 19419 19961 . + . ID=gene-CCO46_RS22765;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=CCO46_RS22765;old_locus_tag=CCO46_22750 NZ_NPOH01000026.1 Protein Homology CDS 19419 19961 . + 0 ID=cds-WP_000996818.1;Parent=gene-CCO46_RS22765;Dbxref=GenBank:WP_000996818.1;Name=WP_000996818.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=CCO46_RS22765;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996818.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 19985 21493 . + . ID=gene-CCO46_RS22770;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=CCO46_RS22770;old_locus_tag=CCO46_22755 NZ_NPOH01000026.1 Protein Homology CDS 19985 21493 . + 0 ID=cds-WP_000013884.1;Parent=gene-CCO46_RS22770;Dbxref=GenBank:WP_000013884.1;Name=WP_000013884.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=CCO46_RS22770;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013884.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 21546 21947 . + . ID=gene-CCO46_RS22775;Name=CCO46_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22775;old_locus_tag=CCO46_22760 NZ_NPOH01000026.1 Protein Homology CDS 21546 21947 . + 0 ID=cds-WP_001147175.1;Parent=gene-CCO46_RS22775;Dbxref=GenBank:WP_001147175.1;Name=WP_001147175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147173.1;locus_tag=CCO46_RS22775;product=BPSL0067 family protein;protein_id=WP_001147175.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 21919 22344 . + . ID=gene-CCO46_RS22780;Name=CCO46_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22780;old_locus_tag=CCO46_22765 NZ_NPOH01000026.1 Protein Homology CDS 21919 22344 . + 0 ID=cds-WP_001171576.1;Parent=gene-CCO46_RS22780;Dbxref=GenBank:WP_001171576.1;Name=WP_001171576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001171576.1;locus_tag=CCO46_RS22780;product=STY0301 family protein;protein_id=WP_001171576.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 22581 23066 . + . ID=gene-CCO46_RS22785;Name=CCO46_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22785;old_locus_tag=CCO46_22770 NZ_NPOH01000026.1 Protein Homology CDS 22581 23066 . + 0 ID=cds-WP_000312802.1;Parent=gene-CCO46_RS22785;Dbxref=GenBank:WP_000312802.1;Name=WP_000312802.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=CCO46_RS22785;product=Hcp family type VI secretion system effector;protein_id=WP_000312802.1;transl_table=11 NZ_NPOH01000026.1 RefSeq pseudogene 23133 23327 . + . ID=gene-CCO46_RS25605;Name=CCO46_RS25605;end_range=23327,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25605;partial=true;pseudo=true NZ_NPOH01000026.1 Protein Homology CDS 23133 23327 . + 0 ID=cds-CCO46_RS25605;Parent=gene-CCO46_RS25605;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO46_RS25605;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 23370 23855 . + . ID=gene-CCO46_RS22790;Name=CCO46_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22790;old_locus_tag=CCO46_22775 NZ_NPOH01000026.1 Protein Homology CDS 23370 23855 . + 0 ID=cds-WP_001081550.1;Parent=gene-CCO46_RS22790;Dbxref=GenBank:WP_001081550.1;Name=WP_001081550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=CCO46_RS22790;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081550.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 23840 24223 . + . ID=gene-CCO46_RS22795;Name=CCO46_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22795;old_locus_tag=CCO46_22780 NZ_NPOH01000026.1 Protein Homology CDS 23840 24223 . + 0 ID=cds-WP_000379146.1;Parent=gene-CCO46_RS22795;Dbxref=GenBank:WP_000379146.1;Name=WP_000379146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=CCO46_RS22795;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379146.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 24366 24851 . + . ID=gene-CCO46_RS22800;Name=CCO46_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22800;old_locus_tag=CCO46_22785 NZ_NPOH01000026.1 Protein Homology CDS 24366 24851 . + 0 ID=cds-WP_000119443.1;Parent=gene-CCO46_RS22800;Dbxref=GenBank:WP_000119443.1;Name=WP_000119443.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=CCO46_RS22800;product=Hcp family type VI secretion system effector;protein_id=WP_000119443.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 24918 25454 . + . ID=gene-CCO46_RS22805;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=CCO46_RS22805;old_locus_tag=CCO46_22790 NZ_NPOH01000026.1 Protein Homology CDS 24918 25454 . + 0 ID=cds-WP_020898423.1;Parent=gene-CCO46_RS22805;Dbxref=GenBank:WP_020898423.1;Name=WP_020898423.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO46_RS22805;product=type VI secretion system lipoprotein TssJ;protein_id=WP_020898423.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 25458 26801 . + . ID=gene-CCO46_RS22810;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=CCO46_RS22810;old_locus_tag=CCO46_22795 NZ_NPOH01000026.1 Protein Homology CDS 25458 26801 . + 0 ID=cds-WP_000118732.1;Parent=gene-CCO46_RS22810;Dbxref=GenBank:WP_000118732.1;Name=WP_000118732.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=CCO46_RS22810;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118732.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 26798 28102 . + . ID=gene-CCO46_RS22815;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=CCO46_RS22815;old_locus_tag=CCO46_22800 NZ_NPOH01000026.1 Protein Homology CDS 26798 28102 . + 0 ID=cds-WP_080160606.1;Parent=gene-CCO46_RS22815;Dbxref=GenBank:WP_080160606.1;Name=WP_080160606.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=CCO46_RS22815;product=type VI secretion system protein TssL%2C long form;protein_id=WP_080160606.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 28107 28880 . + . ID=gene-CCO46_RS22820;Name=CCO46_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22820;old_locus_tag=CCO46_22805 NZ_NPOH01000026.1 Protein Homology CDS 28107 28880 . + 0 ID=cds-WP_023138338.1;Parent=gene-CCO46_RS22820;Dbxref=GenBank:WP_023138338.1;Name=WP_023138338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=CCO46_RS22820;product=Rap1a/Tai family immunity protein;protein_id=WP_023138338.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 29082 29513 . + . ID=gene-CCO46_RS22825;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=CCO46_RS22825;old_locus_tag=CCO46_22810 NZ_NPOH01000026.1 Protein Homology CDS 29082 29513 . + 0 ID=cds-WP_023166851.1;Parent=gene-CCO46_RS22825;Dbxref=GenBank:WP_023166851.1;Name=WP_023166851.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=CCO46_RS22825;product=Shiga-like toxin A subunit SciR;protein_id=WP_023166851.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 29547 33416 . + . ID=gene-CCO46_RS22830;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=CCO46_RS22830;old_locus_tag=CCO46_22815 NZ_NPOH01000026.1 Protein Homology CDS 29547 33416 . + 0 ID=cds-WP_094887846.1;Parent=gene-CCO46_RS22830;Dbxref=GenBank:WP_094887846.1;Name=WP_094887846.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=CCO46_RS22830;product=Type VI secretion protein IcmF;protein_id=WP_094887846.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 33416 34183 . + . ID=gene-CCO46_RS22835;Name=CCO46_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22835;old_locus_tag=CCO46_22820 NZ_NPOH01000026.1 Protein Homology CDS 33416 34183 . + 0 ID=cds-WP_001254130.1;Parent=gene-CCO46_RS22835;Dbxref=GenBank:WP_001254130.1;Name=WP_001254130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=CCO46_RS22835;product=TagF domain-containing protein;protein_id=WP_001254130.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 34226 34696 . + . ID=gene-CCO46_RS22840;Name=CCO46_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22840;old_locus_tag=CCO46_22825 NZ_NPOH01000026.1 Protein Homology CDS 34226 34696 . + 0 ID=cds-WP_000501511.1;Parent=gene-CCO46_RS22840;Dbxref=GenBank:WP_000501511.1;Name=WP_000501511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000501515.1;locus_tag=CCO46_RS22840;product=glucosaminidase domain-containing protein;protein_id=WP_000501511.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 34681 35154 . + . ID=gene-CCO46_RS22845;Name=CCO46_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22845;old_locus_tag=CCO46_22830 NZ_NPOH01000026.1 Protein Homology CDS 34681 35154 . + 0 ID=cds-WP_023213609.1;Parent=gene-CCO46_RS22845;Dbxref=GenBank:WP_023213609.1;Name=WP_023213609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506348.1;locus_tag=CCO46_RS22845;product=hypothetical protein;protein_id=WP_023213609.1;transl_table=11 NZ_NPOH01000026.1 RefSeq pseudogene 35163 35291 . + . ID=gene-CCO46_RS25340;Name=CCO46_RS25340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25340;partial=true;pseudo=true;start_range=.,35163 NZ_NPOH01000026.1 Protein Homology CDS 35163 35291 . + 0 ID=cds-CCO46_RS25340;Parent=gene-CCO46_RS25340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254123.1;locus_tag=CCO46_RS25340;partial=true;product=TagF domain-containing protein;pseudo=true;start_range=.,35163;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 35341 36072 . + . ID=gene-CCO46_RS22850;Name=CCO46_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22850;old_locus_tag=CCO46_22835 NZ_NPOH01000026.1 Protein Homology CDS 35341 36072 . + 0 ID=cds-WP_000040884.1;Parent=gene-CCO46_RS22850;Dbxref=GenBank:WP_000040884.1;Name=WP_000040884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040885.1;locus_tag=CCO46_RS22850;product=hypothetical protein;protein_id=WP_000040884.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 36069 36503 . + . ID=gene-CCO46_RS22855;Name=CCO46_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22855;old_locus_tag=CCO46_22840 NZ_NPOH01000026.1 Protein Homology CDS 36069 36503 . + 0 ID=cds-WP_023208175.1;Parent=gene-CCO46_RS22855;Dbxref=GenBank:WP_023208175.1;Name=WP_023208175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000616626.1;locus_tag=CCO46_RS22855;product=hypothetical protein;protein_id=WP_023208175.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 36683 36829 . + . ID=gene-CCO46_RS25265;Name=CCO46_RS25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25265 NZ_NPOH01000026.1 Protein Homology CDS 36683 36829 . + 0 ID=cds-WP_023208174.1;Parent=gene-CCO46_RS25265;Dbxref=GenBank:WP_023208174.1;Name=WP_023208174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551999.1;locus_tag=CCO46_RS25265;product=hypothetical protein;protein_id=WP_023208174.1;transl_table=11 NZ_NPOH01000026.1 RefSeq pseudogene 36826 37193 . + . ID=gene-CCO46_RS25610;Name=CCO46_RS25610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25610;old_locus_tag=CCO46_22845;pseudo=true NZ_NPOH01000026.1 Protein Homology CDS 36826 37193 . + 0 ID=cds-CCO46_RS25610;Parent=gene-CCO46_RS25610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706217.1;locus_tag=CCO46_RS25610;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 37218 39437 . + . ID=gene-CCO46_RS22865;Name=CCO46_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22865;old_locus_tag=CCO46_22850 NZ_NPOH01000026.1 Protein Homology CDS 37218 39437 . + 0 ID=cds-WP_061371986.1;Parent=gene-CCO46_RS22865;Dbxref=GenBank:WP_061371986.1;Name=WP_061371986.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542647.1;locus_tag=CCO46_RS22865;product=type VI secretion system Vgr family protein;protein_id=WP_061371986.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 39468 39899 . + . ID=gene-CCO46_RS22870;Name=CCO46_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22870;old_locus_tag=CCO46_22855 NZ_NPOH01000026.1 Protein Homology CDS 39468 39899 . + 0 ID=cds-WP_001199685.1;Parent=gene-CCO46_RS22870;Dbxref=GenBank:WP_001199685.1;Name=WP_001199685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199685.1;locus_tag=CCO46_RS22870;product=DcrB-related protein;protein_id=WP_001199685.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 39930 44558 . + . ID=gene-CCO46_RS22875;Name=CCO46_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22875;old_locus_tag=CCO46_22860 NZ_NPOH01000026.1 Protein Homology CDS 39930 44558 . + 0 ID=cds-WP_170947422.1;Parent=gene-CCO46_RS22875;Dbxref=GenBank:WP_170947422.1;Name=WP_170947422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542648.1;locus_tag=CCO46_RS22875;product=DUF6531 domain-containing protein;protein_id=WP_170947422.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 44558 45007 . + . ID=gene-CCO46_RS22880;Name=CCO46_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22880;old_locus_tag=CCO46_22865 NZ_NPOH01000026.1 GeneMarkS-2+ CDS 44558 45007 . + 0 ID=cds-WP_058331200.1;Parent=gene-CCO46_RS22880;Dbxref=GenBank:WP_058331200.1;Name=WP_058331200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS22880;product=hypothetical protein;protein_id=WP_058331200.1;transl_table=11 NZ_NPOH01000026.1 RefSeq gene 45211 45501 . - . ID=gene-CCO46_RS22885;Name=CCO46_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22885;old_locus_tag=CCO46_22870 NZ_NPOH01000026.1 Protein Homology CDS 45211 45501 . - 0 ID=cds-WP_094887852.1;Parent=gene-CCO46_RS22885;Dbxref=GenBank:WP_094887852.1;Name=WP_094887852.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=CCO46_RS22885;product=SymE family type I addiction module toxin;protein_id=WP_094887852.1;transl_table=11 ##sequence-region NZ_NPOH01000027.1 1 45194 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000027.1 RefSeq region 1 45194 . + . ID=NZ_NPOH01000027.1:1..45194;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000027.1 RefSeq gene 34 285 . - . ID=gene-CCO46_RS22890;Name=CCO46_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22890;old_locus_tag=CCO46_22875 NZ_NPOH01000027.1 Protein Homology CDS 34 285 . - 0 ID=cds-WP_058331960.1;Parent=gene-CCO46_RS22890;Dbxref=GenBank:WP_058331960.1;Name=WP_058331960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107724.1;locus_tag=CCO46_RS22890;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_058331960.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 442 1059 . - . ID=gene-CCO46_RS22895;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=CCO46_RS22895;old_locus_tag=CCO46_22880 NZ_NPOH01000027.1 Protein Homology CDS 442 1059 . - 0 ID=cds-WP_000162405.1;Parent=gene-CCO46_RS22895;Dbxref=GenBank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=CCO46_RS22895;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 1059 1958 . - . ID=gene-CCO46_RS22900;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=CCO46_RS22900;old_locus_tag=CCO46_22885 NZ_NPOH01000027.1 Protein Homology CDS 1059 1958 . - 0 ID=cds-WP_000045349.1;Parent=gene-CCO46_RS22900;Dbxref=GenBank:WP_000045349.1;Name=WP_000045349.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=CCO46_RS22900;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 1991 3259 . - . ID=gene-CCO46_RS22905;Name=CCO46_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22905;old_locus_tag=CCO46_22890 NZ_NPOH01000027.1 Protein Homology CDS 1991 3259 . - 0 ID=cds-WP_058331961.1;Parent=gene-CCO46_RS22905;Dbxref=GenBank:WP_058331961.1;Name=WP_058331961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=CCO46_RS22905;product=SLC13 family permease;protein_id=WP_058331961.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 3470 4135 . - . ID=gene-CCO46_RS22910;Name=CCO46_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22910;old_locus_tag=CCO46_22895 NZ_NPOH01000027.1 Protein Homology CDS 3470 4135 . - 0 ID=cds-WP_001171585.1;Parent=gene-CCO46_RS22910;Dbxref=GenBank:WP_001171585.1;Name=WP_001171585.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=CCO46_RS22910;product=GntR family transcriptional regulator;protein_id=WP_001171585.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 4122 4751 . - . ID=gene-CCO46_RS22915;Name=CCO46_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22915;old_locus_tag=CCO46_22900 NZ_NPOH01000027.1 Protein Homology CDS 4122 4751 . - 0 ID=cds-WP_000723776.1;Parent=gene-CCO46_RS22915;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=CCO46_RS22915;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 4871 5809 . - . ID=gene-CCO46_RS22920;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CCO46_RS22920;old_locus_tag=CCO46_22905 NZ_NPOH01000027.1 Protein Homology CDS 4871 5809 . - 0 ID=cds-WP_000861586.1;Parent=gene-CCO46_RS22920;Dbxref=GenBank:WP_000861586.1;Name=WP_000861586.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=CCO46_RS22920;product=malate dehydrogenase;protein_id=WP_000861586.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 6224 6694 . + . ID=gene-CCO46_RS22925;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=CCO46_RS22925;old_locus_tag=CCO46_22910 NZ_NPOH01000027.1 Protein Homology CDS 6224 6694 . + 0 ID=cds-WP_001257852.1;Parent=gene-CCO46_RS22925;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=CCO46_RS22925;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 7059 7322 . + . ID=gene-CCO46_RS22930;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=CCO46_RS22930;old_locus_tag=CCO46_22915 NZ_NPOH01000027.1 Protein Homology CDS 7059 7322 . + 0 ID=cds-WP_000695695.1;Parent=gene-CCO46_RS22930;Dbxref=GenBank:WP_000695695.1;Name=WP_000695695.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=CCO46_RS22930;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695695.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 7426 7692 . + . ID=gene-CCO46_RS22935;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=CCO46_RS22935;old_locus_tag=CCO46_22920 NZ_NPOH01000027.1 Protein Homology CDS 7426 7692 . + 0 ID=cds-WP_023201753.1;Parent=gene-CCO46_RS22935;Dbxref=GenBank:WP_023201753.1;Name=WP_023201753.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=CCO46_RS22935;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_023201753.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 7752 8024 . - . ID=gene-CCO46_RS22940;Name=CCO46_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22940;old_locus_tag=CCO46_22925 NZ_NPOH01000027.1 Protein Homology CDS 7752 8024 . - 0 ID=cds-WP_001103887.1;Parent=gene-CCO46_RS22940;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=CCO46_RS22940;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 8196 10163 . - . ID=gene-CCO46_RS22945;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=CCO46_RS22945;old_locus_tag=CCO46_22930 NZ_NPOH01000027.1 Protein Homology CDS 8196 10163 . - 0 ID=cds-WP_000510913.1;Parent=gene-CCO46_RS22945;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=CCO46_RS22945;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 10169 11101 . - . ID=gene-CCO46_RS22950;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=CCO46_RS22950;old_locus_tag=CCO46_22935 NZ_NPOH01000027.1 Protein Homology CDS 10169 11101 . - 0 ID=cds-WP_000855134.1;Parent=gene-CCO46_RS22950;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=CCO46_RS22950;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 11109 11312 . - . ID=gene-CCO46_RS22955;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=CCO46_RS22955;old_locus_tag=CCO46_22940 NZ_NPOH01000027.1 Protein Homology CDS 11109 11312 . - 0 ID=cds-WP_000051840.1;Parent=gene-CCO46_RS22955;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=CCO46_RS22955;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 11494 12423 . + . ID=gene-CCO46_RS22960;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=CCO46_RS22960;old_locus_tag=CCO46_22945 NZ_NPOH01000027.1 Protein Homology CDS 11494 12423 . + 0 ID=cds-WP_058331962.1;Parent=gene-CCO46_RS22960;Dbxref=GenBank:WP_058331962.1;Name=WP_058331962.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=CCO46_RS22960;product=HTH-type transcriptional activator AaeR;protein_id=WP_058331962.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 12546 13991 . - . ID=gene-CCO46_RS22965;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=CCO46_RS22965;old_locus_tag=CCO46_22950 NZ_NPOH01000027.1 Protein Homology CDS 12546 13991 . - 0 ID=cds-WP_000055932.1;Parent=gene-CCO46_RS22965;Dbxref=GenBank:WP_000055932.1;Name=WP_000055932.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=CCO46_RS22965;product=metalloprotease TldD;protein_id=WP_000055932.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 14136 17936 . - . ID=gene-CCO46_RS22970;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=CCO46_RS22970;old_locus_tag=CCO46_22955 NZ_NPOH01000027.1 Protein Homology CDS 14136 17936 . - 0 ID=cds-WP_001253502.1;Parent=gene-CCO46_RS22970;Dbxref=GenBank:WP_001253502.1;Name=WP_001253502.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=CCO46_RS22970;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253502.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 18047 19516 . - . ID=gene-CCO46_RS22975;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=CCO46_RS22975;old_locus_tag=CCO46_22960 NZ_NPOH01000027.1 Protein Homology CDS 18047 19516 . - 0 ID=cds-WP_000123188.1;Parent=gene-CCO46_RS22975;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=CCO46_RS22975;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 19506 20099 . - . ID=gene-CCO46_RS22980;Name=CCO46_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS22980;old_locus_tag=CCO46_22965 NZ_NPOH01000027.1 Protein Homology CDS 19506 20099 . - 0 ID=cds-WP_000210306.1;Parent=gene-CCO46_RS22980;Dbxref=GenBank:WP_000210306.1;Name=WP_000210306.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=CCO46_RS22980;product=Maf family protein;protein_id=WP_000210306.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 20108 20596 . - . ID=gene-CCO46_RS22985;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CCO46_RS22985;old_locus_tag=CCO46_22970 NZ_NPOH01000027.1 Protein Homology CDS 20108 20596 . - 0 ID=cds-WP_000179403.1;Parent=gene-CCO46_RS22985;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=CCO46_RS22985;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 20599 21651 . - . ID=gene-CCO46_RS22990;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CCO46_RS22990;old_locus_tag=CCO46_22975 NZ_NPOH01000027.1 Protein Homology CDS 20599 21651 . - 0 ID=cds-WP_000802538.1;Parent=gene-CCO46_RS22990;Dbxref=GenBank:WP_000802538.1;Name=WP_000802538.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=CCO46_RS22990;product=rod shape-determining protein MreC;protein_id=WP_000802538.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 21716 22759 . - . ID=gene-CCO46_RS22995;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=CCO46_RS22995;old_locus_tag=CCO46_22980 NZ_NPOH01000027.1 Protein Homology CDS 21716 22759 . - 0 ID=cds-WP_000913396.1;Parent=gene-CCO46_RS22995;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=CCO46_RS22995;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 23067 25007 . - . ID=gene-CCO46_RS23010;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=CCO46_RS23010;old_locus_tag=CCO46_22995 NZ_NPOH01000027.1 Protein Homology CDS 23067 25007 . - 0 ID=cds-WP_058215133.1;Parent=gene-CCO46_RS23010;Dbxref=GenBank:WP_058215133.1;Name=WP_058215133.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=CCO46_RS23010;product=RNase E specificity factor CsrD;protein_id=WP_058215133.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 25211 26185 . + . ID=gene-CCO46_RS23015;Name=CCO46_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23015;old_locus_tag=CCO46_23000 NZ_NPOH01000027.1 Protein Homology CDS 25211 26185 . + 0 ID=cds-WP_076727272.1;Parent=gene-CCO46_RS23015;Dbxref=GenBank:WP_076727272.1;Name=WP_076727272.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=CCO46_RS23015;product=MDR family oxidoreductase;protein_id=WP_076727272.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 26298 27302 . + . ID=gene-CCO46_RS23020;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=CCO46_RS23020;old_locus_tag=CCO46_23005 NZ_NPOH01000027.1 Protein Homology CDS 26298 27302 . + 0 ID=cds-WP_000723876.1;Parent=gene-CCO46_RS23020;Dbxref=GenBank:WP_000723876.1;Name=WP_000723876.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=CCO46_RS23020;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 27303 27902 . + . ID=gene-CCO46_RS23025;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=CCO46_RS23025;old_locus_tag=CCO46_23010 NZ_NPOH01000027.1 Protein Homology CDS 27303 27902 . + 0 ID=cds-WP_001240053.1;Parent=gene-CCO46_RS23025;Dbxref=GenBank:WP_001240053.1;Name=WP_001240053.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=CCO46_RS23025;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240053.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 28295 28765 . + . ID=gene-CCO46_RS23030;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CCO46_RS23030;old_locus_tag=CCO46_23015 NZ_NPOH01000027.1 Protein Homology CDS 28295 28765 . + 0 ID=cds-WP_000354626.1;Parent=gene-CCO46_RS23030;Dbxref=GenBank:WP_000354626.1;Name=WP_000354626.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=CCO46_RS23030;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 28776 30125 . + . ID=gene-CCO46_RS23035;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CCO46_RS23035;old_locus_tag=CCO46_23020 NZ_NPOH01000027.1 Protein Homology CDS 28776 30125 . + 0 ID=cds-WP_000884627.1;Parent=gene-CCO46_RS23035;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=CCO46_RS23035;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 30234 30476 . + . ID=gene-CCO46_RS23040;Name=CCO46_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23040;old_locus_tag=CCO46_23025 NZ_NPOH01000027.1 Protein Homology CDS 30234 30476 . + 0 ID=cds-WP_000340018.1;Parent=gene-CCO46_RS23040;Dbxref=GenBank:WP_000340018.1;Name=WP_000340018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=CCO46_RS23040;product=YhdT family protein;protein_id=WP_000340018.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 30466 31917 . + . ID=gene-CCO46_RS23045;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=CCO46_RS23045;old_locus_tag=CCO46_23030 NZ_NPOH01000027.1 Protein Homology CDS 30466 31917 . + 0 ID=cds-WP_001175748.1;Parent=gene-CCO46_RS23045;Dbxref=GenBank:WP_001175748.1;Name=WP_001175748.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=CCO46_RS23045;product=sodium/pantothenate symporter;protein_id=WP_001175748.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 31929 32810 . + . ID=gene-CCO46_RS23050;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CCO46_RS23050;old_locus_tag=CCO46_23035 NZ_NPOH01000027.1 Protein Homology CDS 31929 32810 . + 0 ID=cds-WP_001145849.1;Parent=gene-CCO46_RS23050;Dbxref=GenBank:WP_001145849.1;Name=WP_001145849.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=CCO46_RS23050;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145849.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 33470 34435 . + . ID=gene-CCO46_RS23055;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CCO46_RS23055;old_locus_tag=CCO46_23040 NZ_NPOH01000027.1 Protein Homology CDS 33470 34435 . + 0 ID=cds-WP_097363517.1;Parent=gene-CCO46_RS23055;Dbxref=GenBank:WP_097363517.1;Name=WP_097363517.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=CCO46_RS23055;product=tRNA dihydrouridine synthase DusB;protein_id=WP_097363517.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 34461 34757 . + . ID=gene-CCO46_RS23060;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=CCO46_RS23060;old_locus_tag=CCO46_23045 NZ_NPOH01000027.1 Protein Homology CDS 34461 34757 . + 0 ID=cds-WP_000462905.1;Parent=gene-CCO46_RS23060;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=CCO46_RS23060;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 34843 35727 . + . ID=gene-CCO46_RS23065;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=CCO46_RS23065;old_locus_tag=CCO46_23050 NZ_NPOH01000027.1 Protein Homology CDS 34843 35727 . + 0 ID=cds-WP_000642611.1;Parent=gene-CCO46_RS23065;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=CCO46_RS23065;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 35810 35974 . + . ID=gene-CCO46_RS23070;Name=CCO46_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23070;old_locus_tag=CCO46_23055 NZ_NPOH01000027.1 Protein Homology CDS 35810 35974 . + 0 ID=cds-WP_000620015.1;Parent=gene-CCO46_RS23070;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=CCO46_RS23070;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 36125 38200 . + . ID=gene-CCO46_RS23075;Name=CCO46_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23075;old_locus_tag=CCO46_23060 NZ_NPOH01000027.1 Protein Homology CDS 36125 38200 . + 0 ID=cds-WP_097363518.1;Parent=gene-CCO46_RS23075;Dbxref=GenBank:WP_097363518.1;Name=WP_097363518.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145339.1;locus_tag=CCO46_RS23075;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_097363518.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 38227 38889 . - . ID=gene-CCO46_RS23080;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=CCO46_RS23080;old_locus_tag=CCO46_23065 NZ_NPOH01000027.1 Protein Homology CDS 38227 38889 . - 0 ID=cds-WP_001085725.1;Parent=gene-CCO46_RS23080;Dbxref=GenBank:WP_001085725.1;Name=WP_001085725.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=CCO46_RS23080;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085725.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 39303 40460 . + . ID=gene-CCO46_RS23085;Name=CCO46_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23085;old_locus_tag=CCO46_23070 NZ_NPOH01000027.1 Protein Homology CDS 39303 40460 . + 0 ID=cds-WP_000160383.1;Parent=gene-CCO46_RS23085;Dbxref=GenBank:WP_000160383.1;Name=WP_000160383.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=CCO46_RS23085;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000160383.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 40472 43585 . + . ID=gene-CCO46_RS23090;Name=CCO46_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23090;old_locus_tag=CCO46_23075 NZ_NPOH01000027.1 Protein Homology CDS 40472 43585 . + 0 ID=cds-WP_001273283.1;Parent=gene-CCO46_RS23090;Dbxref=GenBank:WP_001273283.1;Name=WP_001273283.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=CCO46_RS23090;product=efflux RND transporter permease subunit;protein_id=WP_001273283.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 43821 44042 . + . ID=gene-CCO46_RS23095;Name=CCO46_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23095;old_locus_tag=CCO46_23080 NZ_NPOH01000027.1 Protein Homology CDS 43821 44042 . + 0 ID=cds-WP_000825645.1;Parent=gene-CCO46_RS23095;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=CCO46_RS23095;product=membrane protein;protein_id=WP_000825645.1;transl_table=11 NZ_NPOH01000027.1 RefSeq gene 44827 44942 . - . ID=gene-CCO46_RS23100;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO46_RS23100;old_locus_tag=CCO46_23085 NZ_NPOH01000027.1 cmsearch rRNA 44827 44942 . - . ID=rna-CCO46_RS23100;Parent=gene-CCO46_RS23100;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS23100;product=5S ribosomal RNA NZ_NPOH01000027.1 cmsearch exon 44827 44942 . - . ID=exon-CCO46_RS23100-1;Parent=rna-CCO46_RS23100;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS23100;product=5S ribosomal RNA NZ_NPOH01000027.1 RefSeq gene 44982 45057 . - . ID=gene-CCO46_RS23105;Name=CCO46_RS23105;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS23105;old_locus_tag=CCO46_23090 NZ_NPOH01000027.1 tRNAscan-SE tRNA 44982 45057 . - . ID=rna-CCO46_RS23105;Parent=gene-CCO46_RS23105;anticodon=(pos:complement(45022..45024));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS23105;product=tRNA-Thr NZ_NPOH01000027.1 tRNAscan-SE exon 44982 45057 . - . ID=exon-CCO46_RS23105-1;Parent=rna-CCO46_RS23105;anticodon=(pos:complement(45022..45024));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS23105;product=tRNA-Thr NZ_NPOH01000027.1 RefSeq gene 45072 45187 . - . ID=gene-CCO46_RS23110;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO46_RS23110;old_locus_tag=CCO46_23095 NZ_NPOH01000027.1 cmsearch rRNA 45072 45187 . - . ID=rna-CCO46_RS23110;Parent=gene-CCO46_RS23110;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS23110;product=5S ribosomal RNA NZ_NPOH01000027.1 cmsearch exon 45072 45187 . - . ID=exon-CCO46_RS23110-1;Parent=rna-CCO46_RS23110;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS23110;product=5S ribosomal RNA ##sequence-region NZ_NPOH01000028.1 1 35588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000028.1 RefSeq region 1 35588 . + . ID=NZ_NPOH01000028.1:1..35588;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000028.1 RefSeq pseudogene 1 293 . + . ID=gene-CCO46_RS23115;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO46_RS23115;old_locus_tag=CCO46_23100;partial=true;pseudo=true;start_range=.,1 NZ_NPOH01000028.1 Protein Homology CDS 1 293 . + 2 ID=cds-CCO46_RS23115;Parent=gene-CCO46_RS23115;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO46_RS23115;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 523 906 . + . ID=gene-CCO46_RS23120;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CCO46_RS23120;old_locus_tag=CCO46_23105 NZ_NPOH01000028.1 Protein Homology CDS 523 906 . + 0 ID=cds-WP_001275691.1;Parent=gene-CCO46_RS23120;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=CCO46_RS23120;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 908 1453 . + . ID=gene-CCO46_RS23125;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CCO46_RS23125;old_locus_tag=CCO46_23110 NZ_NPOH01000028.1 Protein Homology CDS 908 1453 . + 0 ID=cds-WP_001287521.1;Parent=gene-CCO46_RS23125;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=CCO46_RS23125;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 1611 2039 . + . ID=gene-CCO46_RS23130;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CCO46_RS23130;old_locus_tag=CCO46_23115 NZ_NPOH01000028.1 Protein Homology CDS 1611 2039 . + 0 ID=cds-WP_001085926.1;Parent=gene-CCO46_RS23130;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=CCO46_RS23130;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 2043 2747 . + . ID=gene-CCO46_RS23135;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CCO46_RS23135;old_locus_tag=CCO46_23120 NZ_NPOH01000028.1 Protein Homology CDS 2043 2747 . + 0 ID=cds-WP_001096676.1;Parent=gene-CCO46_RS23135;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=CCO46_RS23135;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 3167 3664 . + . ID=gene-CCO46_RS23145;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CCO46_RS23145;old_locus_tag=CCO46_23130 NZ_NPOH01000028.1 Protein Homology CDS 3167 3664 . + 0 ID=cds-WP_001207203.1;Parent=gene-CCO46_RS23145;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=CCO46_RS23145;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 3731 4096 . + . ID=gene-CCO46_RS23150;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CCO46_RS23150;old_locus_tag=CCO46_23135 NZ_NPOH01000028.1 Protein Homology CDS 3731 4096 . + 0 ID=cds-WP_000028882.1;Parent=gene-CCO46_RS23150;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=CCO46_RS23150;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 4414 8442 . + . ID=gene-CCO46_RS23155;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CCO46_RS23155;old_locus_tag=CCO46_23140 NZ_NPOH01000028.1 Protein Homology CDS 4414 8442 . + 0 ID=cds-WP_000263105.1;Parent=gene-CCO46_RS23155;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=CCO46_RS23155;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 8519 12742 . + . ID=gene-CCO46_RS23160;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CCO46_RS23160;old_locus_tag=CCO46_23145 NZ_NPOH01000028.1 Protein Homology CDS 8519 12742 . + 0 ID=cds-WP_000653965.1;Parent=gene-CCO46_RS23160;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=CCO46_RS23160;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 12784 13110 . + . ID=gene-CCO46_RS23165;Name=CCO46_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23165;old_locus_tag=CCO46_23150 NZ_NPOH01000028.1 Protein Homology CDS 12784 13110 . + 0 ID=cds-WP_001654075.1;Parent=gene-CCO46_RS23165;Dbxref=GenBank:WP_001654075.1;Name=WP_001654075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=CCO46_RS23165;product=hypothetical protein;protein_id=WP_001654075.1;transl_table=11 NZ_NPOH01000028.1 RefSeq pseudogene 13116 13456 . - . ID=gene-CCO46_RS23170;Name=CCO46_RS23170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS23170;old_locus_tag=CCO46_23155;partial=true;pseudo=true;start_range=.,13116 NZ_NPOH01000028.1 Protein Homology CDS 13116 13456 . - 0 ID=cds-CCO46_RS23170;Parent=gene-CCO46_RS23170;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=CCO46_RS23170;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,13116;transl_table=11 NZ_NPOH01000028.1 RefSeq pseudogene 13894 13974 . - . ID=gene-CCO46_RS25090;Name=CCO46_RS25090;end_range=13974,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25090;partial=true;pseudo=true NZ_NPOH01000028.1 Protein Homology CDS 13894 13974 . - 0 ID=cds-CCO46_RS25090;Parent=gene-CCO46_RS25090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13974,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168157.1;locus_tag=CCO46_RS25090;partial=true;product=PTS lactose/cellobiose transporter subunit IIA;pseudo=true;transl_table=11 NZ_NPOH01000028.1 RefSeq pseudogene 14012 15210 . - . ID=gene-CCO46_RS23175;Name=CCO46_RS23175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS23175;old_locus_tag=CCO46_23160;pseudo=true NZ_NPOH01000028.1 Protein Homology CDS 14012 15210 . - 0 ID=cds-CCO46_RS23175;Parent=gene-CCO46_RS23175;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO46_RS23175;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 15311 15988 . - . ID=gene-CCO46_RS23180;Name=CCO46_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23180;old_locus_tag=CCO46_23165 NZ_NPOH01000028.1 Protein Homology CDS 15311 15988 . - 0 ID=cds-WP_140439322.1;Parent=gene-CCO46_RS23180;Dbxref=GenBank:WP_140439322.1;Name=WP_140439322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609745.1;locus_tag=CCO46_RS23180;product=NleE/OspZ family T3SS effector cysteine methyltransferase;protein_id=WP_140439322.1;transl_table=11 NZ_NPOH01000028.1 RefSeq pseudogene 16361 16551 . + . ID=gene-CCO46_RS23185;Name=CCO46_RS23185;end_range=16551,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS23185;old_locus_tag=CCO46_23170;partial=true;pseudo=true NZ_NPOH01000028.1 Protein Homology CDS 16361 16551 . + 0 ID=cds-CCO46_RS23185;Parent=gene-CCO46_RS23185;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16551,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=CCO46_RS23185;partial=true;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 16800 17039 . + . ID=gene-CCO46_RS25100;Name=CCO46_RS25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25100 NZ_NPOH01000028.1 GeneMarkS-2+ CDS 16800 17039 . + 0 ID=cds-WP_125855795.1;Parent=gene-CCO46_RS25100;Dbxref=GenBank:WP_125855795.1;Name=WP_125855795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25100;product=hypothetical protein;protein_id=WP_125855795.1;transl_table=11 NZ_NPOH01000028.1 RefSeq pseudogene 17452 17559 . - . ID=gene-CCO46_RS25935;Name=CCO46_RS25935;end_range=17559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25935;partial=true;pseudo=true NZ_NPOH01000028.1 Protein Homology CDS 17452 17559 . - 0 ID=cds-CCO46_RS25935;Parent=gene-CCO46_RS25935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=17559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=CCO46_RS25935;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_NPOH01000028.1 RefSeq pseudogene 17542 17727 . + . ID=gene-CCO46_RS23190;Name=CCO46_RS23190;end_range=17727,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS23190;old_locus_tag=CCO46_23175;partial=true;pseudo=true NZ_NPOH01000028.1 Protein Homology CDS 17542 17727 . + 0 ID=cds-CCO46_RS23190;Parent=gene-CCO46_RS23190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=CCO46_RS23190;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 17881 19014 . - . ID=gene-CCO46_RS23195;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=CCO46_RS23195;old_locus_tag=CCO46_23180 NZ_NPOH01000028.1 Protein Homology CDS 17881 19014 . - 0 ID=cds-WP_097363519.1;Parent=gene-CCO46_RS23195;Dbxref=GenBank:WP_097363519.1;Name=WP_097363519.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=CCO46_RS23195;product=2-iminoacetate synthase ThiH;protein_id=WP_097363519.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 19011 19781 . - . ID=gene-CCO46_RS23200;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=CCO46_RS23200;old_locus_tag=CCO46_23185 NZ_NPOH01000028.1 Protein Homology CDS 19011 19781 . - 0 ID=cds-WP_097363520.1;Parent=gene-CCO46_RS23200;Dbxref=GenBank:WP_097363520.1;Name=WP_097363520.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=CCO46_RS23200;product=thiazole synthase;protein_id=WP_097363520.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 19783 19983 . - . ID=gene-CCO46_RS23205;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CCO46_RS23205;old_locus_tag=CCO46_23190 NZ_NPOH01000028.1 Protein Homology CDS 19783 19983 . - 0 ID=cds-WP_001166838.1;Parent=gene-CCO46_RS23205;Dbxref=GenBank:WP_001166838.1;Name=WP_001166838.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=CCO46_RS23205;product=sulfur carrier protein ThiS;protein_id=WP_001166838.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 19964 20722 . - . ID=gene-CCO46_RS23210;Name=CCO46_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23210;old_locus_tag=CCO46_23195 NZ_NPOH01000028.1 Protein Homology CDS 19964 20722 . - 0 ID=cds-WP_079981896.1;Parent=gene-CCO46_RS23210;Dbxref=GenBank:WP_079981896.1;Name=WP_079981896.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=CCO46_RS23210;product=HesA/MoeB/ThiF family protein;protein_id=WP_079981896.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 20715 21350 . - . ID=gene-CCO46_RS23215;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CCO46_RS23215;old_locus_tag=CCO46_23200 NZ_NPOH01000028.1 Protein Homology CDS 20715 21350 . - 0 ID=cds-WP_000284622.1;Parent=gene-CCO46_RS23215;Dbxref=GenBank:WP_000284622.1;Name=WP_000284622.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=CCO46_RS23215;product=thiamine phosphate synthase;protein_id=WP_000284622.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 21350 23245 . - . ID=gene-CCO46_RS23220;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CCO46_RS23220;old_locus_tag=CCO46_23205 NZ_NPOH01000028.1 Protein Homology CDS 21350 23245 . - 0 ID=cds-WP_000108408.1;Parent=gene-CCO46_RS23220;Dbxref=GenBank:WP_000108408.1;Name=WP_000108408.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=CCO46_RS23220;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_000108408.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 23609 24097 . - . ID=gene-CCO46_RS23225;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=CCO46_RS23225;old_locus_tag=CCO46_23210 NZ_NPOH01000028.1 Protein Homology CDS 23609 24097 . - 0 ID=cds-WP_000934315.1;Parent=gene-CCO46_RS23225;Dbxref=GenBank:WP_000934315.1;Name=WP_000934315.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=CCO46_RS23225;product=sigma D regulator;protein_id=WP_000934315.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 24190 24963 . + . ID=gene-CCO46_RS23230;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=CCO46_RS23230;old_locus_tag=CCO46_23215 NZ_NPOH01000028.1 Protein Homology CDS 24190 24963 . + 0 ID=cds-WP_000373958.1;Parent=gene-CCO46_RS23230;Dbxref=GenBank:WP_000373958.1;Name=WP_000373958.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=CCO46_RS23230;product=NAD(+) diphosphatase;protein_id=WP_000373958.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 25004 26068 . + . ID=gene-CCO46_RS23235;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CCO46_RS23235;old_locus_tag=CCO46_23220 NZ_NPOH01000028.1 Protein Homology CDS 25004 26068 . + 0 ID=cds-WP_000137628.1;Parent=gene-CCO46_RS23235;Dbxref=GenBank:WP_000137628.1;Name=WP_000137628.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=CCO46_RS23235;product=uroporphyrinogen decarboxylase;protein_id=WP_000137628.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 26078 26749 . + . ID=gene-CCO46_RS23240;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=CCO46_RS23240;old_locus_tag=CCO46_23225 NZ_NPOH01000028.1 Protein Homology CDS 26078 26749 . + 0 ID=cds-WP_000362359.1;Parent=gene-CCO46_RS23240;Dbxref=GenBank:WP_000362359.1;Name=WP_000362359.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=CCO46_RS23240;product=deoxyribonuclease V;protein_id=WP_000362359.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 26791 27381 . + . ID=gene-CCO46_RS23245;Name=CCO46_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23245;old_locus_tag=CCO46_23230 NZ_NPOH01000028.1 Protein Homology CDS 26791 27381 . + 0 ID=cds-WP_000940092.1;Parent=gene-CCO46_RS23245;Dbxref=GenBank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=CCO46_RS23245;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 27568 27840 . + . ID=gene-CCO46_RS23250;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=CCO46_RS23250;old_locus_tag=CCO46_23235 NZ_NPOH01000028.1 Protein Homology CDS 27568 27840 . + 0 ID=cds-WP_001044509.1;Parent=gene-CCO46_RS23250;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=CCO46_RS23250;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 27852 28544 . + . ID=gene-CCO46_RS23255;Name=CCO46_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23255;old_locus_tag=CCO46_23240 NZ_NPOH01000028.1 Protein Homology CDS 27852 28544 . + 0 ID=cds-WP_001083940.1;Parent=gene-CCO46_RS23255;Dbxref=GenBank:WP_001083940.1;Name=WP_001083940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=CCO46_RS23255;product=DUF1481 domain-containing protein;protein_id=WP_001083940.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 28586 29041 . - . ID=gene-CCO46_RS23260;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=CCO46_RS23260;old_locus_tag=CCO46_23245 NZ_NPOH01000028.1 Protein Homology CDS 28586 29041 . - 0 ID=cds-WP_000828129.1;Parent=gene-CCO46_RS23260;Dbxref=GenBank:WP_000828129.1;Name=WP_000828129.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=CCO46_RS23260;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828129.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 29295 30692 . + . ID=gene-CCO46_RS23265;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=CCO46_RS23265;old_locus_tag=CCO46_23250 NZ_NPOH01000028.1 Protein Homology CDS 29295 30692 . + 0 ID=cds-WP_097363522.1;Parent=gene-CCO46_RS23265;Dbxref=GenBank:WP_097363522.1;Name=WP_097363522.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=CCO46_RS23265;product=two-component system sensor histidine kinase ZraS;protein_id=WP_097363522.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 30698 32023 . + . ID=gene-CCO46_RS23270;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=CCO46_RS23270;old_locus_tag=CCO46_23255 NZ_NPOH01000028.1 Protein Homology CDS 30698 32023 . + 0 ID=cds-WP_000617936.1;Parent=gene-CCO46_RS23270;Dbxref=GenBank:WP_000617936.1;Name=WP_000617936.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=CCO46_RS23270;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000617936.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 32020 33309 . - . ID=gene-CCO46_RS23275;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CCO46_RS23275;old_locus_tag=CCO46_23260 NZ_NPOH01000028.1 Protein Homology CDS 32020 33309 . - 0 ID=cds-WP_052932737.1;Parent=gene-CCO46_RS23275;Dbxref=GenBank:WP_052932737.1;Name=WP_052932737.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=CCO46_RS23275;product=phosphoribosylamine--glycine ligase;protein_id=WP_052932737.1;transl_table=11 NZ_NPOH01000028.1 RefSeq gene 33325 34914 . - . ID=gene-CCO46_RS23280;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CCO46_RS23280;old_locus_tag=CCO46_23265 NZ_NPOH01000028.1 Protein Homology CDS 33325 34914 . - 0 ID=cds-WP_001187507.1;Parent=gene-CCO46_RS23280;Dbxref=GenBank:WP_001187507.1;Name=WP_001187507.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=CCO46_RS23280;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187507.1;transl_table=11 ##sequence-region NZ_NPOH01000029.1 1 30786 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000029.1 RefSeq region 1 30786 . + . ID=NZ_NPOH01000029.1:1..30786;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000029.1 RefSeq pseudogene 503 655 . + . ID=gene-CCO46_RS25615;Name=CCO46_RS25615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25615;old_locus_tag=CCO46_23280;partial=true;pseudo=true;start_range=.,503 NZ_NPOH01000029.1 Protein Homology CDS 503 655 . + 0 ID=cds-CCO46_RS25615;Parent=gene-CCO46_RS25615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.6;locus_tag=CCO46_RS25615;partial=true;product=PLP-dependent transferase;pseudo=true;start_range=.,503;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 773 2071 . + . ID=gene-CCO46_RS23295;Name=CCO46_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23295;old_locus_tag=CCO46_23285 NZ_NPOH01000029.1 Protein Homology CDS 773 2071 . + 0 ID=cds-WP_001150163.1;Parent=gene-CCO46_RS23295;Dbxref=GenBank:WP_001150163.1;Name=WP_001150163.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=CCO46_RS23295;product=aromatic amino acid transport family protein;protein_id=WP_001150163.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 2172 3185 . - . ID=gene-CCO46_RS23300;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=CCO46_RS23300;old_locus_tag=CCO46_23290 NZ_NPOH01000029.1 Protein Homology CDS 2172 3185 . - 0 ID=cds-WP_097363523.1;Parent=gene-CCO46_RS23300;Dbxref=GenBank:WP_097363523.1;Name=WP_097363523.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=CCO46_RS23300;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_097363523.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 3182 4165 . - . ID=gene-CCO46_RS23305;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=CCO46_RS23305;old_locus_tag=CCO46_23295 NZ_NPOH01000029.1 Protein Homology CDS 3182 4165 . - 0 ID=cds-WP_001196509.1;Parent=gene-CCO46_RS23305;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=CCO46_RS23305;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 4176 5078 . - . ID=gene-CCO46_RS23310;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=CCO46_RS23310;old_locus_tag=CCO46_23300 NZ_NPOH01000029.1 Protein Homology CDS 4176 5078 . - 0 ID=cds-WP_000084690.1;Parent=gene-CCO46_RS23310;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=CCO46_RS23310;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 5088 6107 . - . ID=gene-CCO46_RS23315;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=CCO46_RS23315;old_locus_tag=CCO46_23305 NZ_NPOH01000029.1 Protein Homology CDS 5088 6107 . - 0 ID=cds-WP_000938843.1;Parent=gene-CCO46_RS23315;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=CCO46_RS23315;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 6264 7871 . - . ID=gene-CCO46_RS23320;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=CCO46_RS23320;old_locus_tag=CCO46_23310 NZ_NPOH01000029.1 Protein Homology CDS 6264 7871 . - 0 ID=cds-WP_000028047.1;Parent=gene-CCO46_RS23320;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=CCO46_RS23320;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 8427 9752 . - . ID=gene-CCO46_RS23325;Name=CCO46_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23325;old_locus_tag=CCO46_23315 NZ_NPOH01000029.1 Protein Homology CDS 8427 9752 . - 0 ID=cds-WP_001136079.1;Parent=gene-CCO46_RS23325;Dbxref=GenBank:WP_001136079.1;Name=WP_001136079.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=CCO46_RS23325;product=uracil-xanthine permease family protein;protein_id=WP_001136079.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 9810 10934 . - . ID=gene-CCO46_RS23330;Name=CCO46_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23330;old_locus_tag=CCO46_23320 NZ_NPOH01000029.1 Protein Homology CDS 9810 10934 . - 0 ID=cds-WP_000940803.1;Parent=gene-CCO46_RS23330;Dbxref=GenBank:WP_000940803.1;Name=WP_000940803.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=CCO46_RS23330;product=aryl-sulfate sulfotransferase;protein_id=WP_000940803.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 11084 12091 . + . ID=gene-CCO46_RS23335;Name=CCO46_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23335;old_locus_tag=CCO46_23325 NZ_NPOH01000029.1 Protein Homology CDS 11084 12091 . + 0 ID=cds-WP_023201744.1;Parent=gene-CCO46_RS23335;Dbxref=GenBank:WP_023201744.1;Name=WP_023201744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=CCO46_RS23335;product=substrate-binding domain-containing protein;protein_id=WP_023201744.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 12164 14131 . - . ID=gene-CCO46_RS23340;Name=CCO46_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23340;old_locus_tag=CCO46_23330 NZ_NPOH01000029.1 Protein Homology CDS 12164 14131 . - 0 ID=cds-WP_094887769.1;Parent=gene-CCO46_RS23340;Dbxref=GenBank:WP_094887769.1;Name=WP_094887769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484537.1;locus_tag=CCO46_RS23340;product=AlbA family DNA-binding domain-containing protein;protein_id=WP_094887769.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 14471 14836 . - . ID=gene-CCO46_RS23345;Name=CCO46_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23345;old_locus_tag=CCO46_23335 NZ_NPOH01000029.1 Protein Homology CDS 14471 14836 . - 0 ID=cds-WP_023201742.1;Parent=gene-CCO46_RS23345;Dbxref=GenBank:WP_023201742.1;Name=WP_023201742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091330.1;locus_tag=CCO46_RS23345;product=phage integrase central domain-containing protein;protein_id=WP_023201742.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 15019 15152 . - . ID=gene-CCO46_RS23350;Name=CCO46_RS23350;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO46_RS23350;old_locus_tag=CCO46_23340 NZ_NPOH01000029.1 cmsearch ncRNA 15019 15152 . - . ID=rna-CCO46_RS23350;Parent=gene-CCO46_RS23350;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS23350;product=RtT sRNA NZ_NPOH01000029.1 cmsearch exon 15019 15152 . - . ID=exon-CCO46_RS23350-1;Parent=rna-CCO46_RS23350;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS23350;product=RtT sRNA NZ_NPOH01000029.1 RefSeq gene 15187 15263 . - . ID=gene-CCO46_RS23355;Name=CCO46_RS23355;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS23355;old_locus_tag=CCO46_23345 NZ_NPOH01000029.1 tRNAscan-SE tRNA 15187 15263 . - . ID=rna-CCO46_RS23355;Parent=gene-CCO46_RS23355;anticodon=(pos:complement(15227..15229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS23355;product=tRNA-Pro NZ_NPOH01000029.1 tRNAscan-SE exon 15187 15263 . - . ID=exon-CCO46_RS23355-1;Parent=rna-CCO46_RS23355;anticodon=(pos:complement(15227..15229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS23355;product=tRNA-Pro NZ_NPOH01000029.1 RefSeq gene 15354 17045 . - . ID=gene-CCO46_RS23360;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=CCO46_RS23360;old_locus_tag=CCO46_23350 NZ_NPOH01000029.1 Protein Homology CDS 15354 17045 . - 0 ID=cds-WP_001269257.1;Parent=gene-CCO46_RS23360;Dbxref=GenBank:WP_001269257.1;Name=WP_001269257.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=CCO46_RS23360;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269257.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 17276 17980 . - . ID=gene-CCO46_RS23365;Name=CCO46_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23365;old_locus_tag=CCO46_23355 NZ_NPOH01000029.1 Protein Homology CDS 17276 17980 . - 0 ID=cds-WP_000637069.1;Parent=gene-CCO46_RS23365;Dbxref=GenBank:WP_000637069.1;Name=WP_000637069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=CCO46_RS23365;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637069.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 18136 18717 . + . ID=gene-CCO46_RS23370;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=CCO46_RS23370;old_locus_tag=CCO46_23360 NZ_NPOH01000029.1 Protein Homology CDS 18136 18717 . + 0 ID=cds-WP_001188419.1;Parent=gene-CCO46_RS23370;Dbxref=GenBank:WP_001188419.1;Name=WP_001188419.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=CCO46_RS23370;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188419.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 18695 19135 . + . ID=gene-CCO46_RS23375;Name=CCO46_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23375;old_locus_tag=CCO46_23365 NZ_NPOH01000029.1 Protein Homology CDS 18695 19135 . + 0 ID=cds-WP_000619902.1;Parent=gene-CCO46_RS23375;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=CCO46_RS23375;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 19104 21437 . - . ID=gene-CCO46_RS23380;Name=CCO46_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23380;old_locus_tag=CCO46_23370 NZ_NPOH01000029.1 Protein Homology CDS 19104 21437 . - 0 ID=cds-WP_097363524.1;Parent=gene-CCO46_RS23380;Dbxref=GenBank:WP_097363524.1;Name=WP_097363524.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=CCO46_RS23380;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_097363524.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 21590 22252 . + . ID=gene-CCO46_RS23385;Name=CCO46_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23385;old_locus_tag=CCO46_23375 NZ_NPOH01000029.1 Protein Homology CDS 21590 22252 . + 0 ID=cds-WP_000747548.1;Parent=gene-CCO46_RS23385;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=CCO46_RS23385;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 22471 23445 . + . ID=gene-CCO46_RS23390;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=CCO46_RS23390;old_locus_tag=CCO46_23380 NZ_NPOH01000029.1 Protein Homology CDS 22471 23445 . + 0 ID=cds-WP_000804682.1;Parent=gene-CCO46_RS23390;Dbxref=GenBank:WP_000804682.1;Name=WP_000804682.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=CCO46_RS23390;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000804682.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 23495 24205 . - . ID=gene-CCO46_RS23395;Name=CCO46_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23395;old_locus_tag=CCO46_23385 NZ_NPOH01000029.1 Protein Homology CDS 23495 24205 . - 0 ID=cds-WP_000190524.1;Parent=gene-CCO46_RS23395;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=CCO46_RS23395;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 24645 24935 . + . ID=gene-CCO46_RS23400;Name=CCO46_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23400;old_locus_tag=CCO46_23390 NZ_NPOH01000029.1 Protein Homology CDS 24645 24935 . + 0 ID=cds-WP_097363525.1;Parent=gene-CCO46_RS23400;Dbxref=GenBank:WP_097363525.1;Name=WP_097363525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=CCO46_RS23400;product=HTH-type transcriptional regulator;protein_id=WP_097363525.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 25223 25435 . + . ID=gene-CCO46_RS23405;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO46_RS23405;old_locus_tag=CCO46_23395 NZ_NPOH01000029.1 Protein Homology CDS 25223 25435 . + 0 ID=cds-WP_000014594.1;Parent=gene-CCO46_RS23405;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=CCO46_RS23405;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 25609 26148 . + . ID=gene-CCO46_RS23410;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=CCO46_RS23410;old_locus_tag=CCO46_23400 NZ_NPOH01000029.1 Protein Homology CDS 25609 26148 . + 0 ID=cds-WP_000047141.1;Parent=gene-CCO46_RS23410;Dbxref=GenBank:WP_000047141.1;Name=WP_000047141.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=CCO46_RS23410;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_000047141.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 26519 27004 . - . ID=gene-CCO46_RS23415;Name=CCO46_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23415;old_locus_tag=CCO46_23405 NZ_NPOH01000029.1 Protein Homology CDS 26519 27004 . - 0 ID=cds-WP_023198715.1;Parent=gene-CCO46_RS23415;Dbxref=GenBank:WP_023198715.1;Name=WP_023198715.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=CCO46_RS23415;product=GNAT family N-acetyltransferase;protein_id=WP_023198715.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 26992 27279 . - . ID=gene-CCO46_RS23420;Name=CCO46_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23420;old_locus_tag=CCO46_23410 NZ_NPOH01000029.1 Protein Homology CDS 26992 27279 . - 0 ID=cds-WP_072275475.1;Parent=gene-CCO46_RS23420;Dbxref=GenBank:WP_072275475.1;Name=WP_072275475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=CCO46_RS23420;product=DUF1778 domain-containing protein;protein_id=WP_072275475.1;transl_table=11 NZ_NPOH01000029.1 RefSeq pseudogene 27445 28051 . - . ID=gene-CCO46_RS23425;Name=CCO46_RS23425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS23425;old_locus_tag=CCO46_23415;pseudo=true NZ_NPOH01000029.1 Protein Homology CDS 27445 28051 . - 0 ID=cds-CCO46_RS23425;Parent=gene-CCO46_RS23425;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227035.1;locus_tag=CCO46_RS23425;product=cysteine hydrolase family protein;pseudo=true;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 28092 29294 . - . ID=gene-CCO46_RS23430;Name=CCO46_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23430;old_locus_tag=CCO46_23420 NZ_NPOH01000029.1 Protein Homology CDS 28092 29294 . - 0 ID=cds-WP_061372413.1;Parent=gene-CCO46_RS23430;Dbxref=GenBank:WP_061372413.1;Name=WP_061372413.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628845.1;locus_tag=CCO46_RS23430;product=MFS transporter;protein_id=WP_061372413.1;transl_table=11 NZ_NPOH01000029.1 RefSeq gene 29379 30029 . + . ID=gene-CCO46_RS23435;Name=CCO46_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23435;old_locus_tag=CCO46_23425 NZ_NPOH01000029.1 Protein Homology CDS 29379 30029 . + 0 ID=cds-WP_023993641.1;Parent=gene-CCO46_RS23435;Dbxref=GenBank:WP_023993641.1;Name=WP_023993641.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247421.1;locus_tag=CCO46_RS23435;product=GntR family transcriptional regulator;protein_id=WP_023993641.1;transl_table=11 NZ_NPOH01000029.1 RefSeq pseudogene 30148 30579 . - . ID=gene-CCO46_RS25620;Name=CCO46_RS25620;end_range=30579,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25620;partial=true;pseudo=true NZ_NPOH01000029.1 Protein Homology CDS 30148 30579 . - 0 ID=cds-CCO46_RS25620;Parent=gene-CCO46_RS25620;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;end_range=30579,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=CCO46_RS25620;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_NPOH01000003.1 1 303905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000003.1 RefSeq region 1 303905 . + . ID=NZ_NPOH01000003.1:1..303905;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000003.1 RefSeq gene 231 1898 . - . ID=gene-CCO46_RS04505;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=CCO46_RS04505;old_locus_tag=CCO46_04500 NZ_NPOH01000003.1 Protein Homology CDS 231 1898 . - 0 ID=cds-WP_001287186.1;Parent=gene-CCO46_RS04505;Dbxref=GenBank:WP_001287186.1;Name=WP_001287186.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=CCO46_RS04505;product=glutamine--tRNA ligase;protein_id=WP_001287186.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 2109 4061 . - . ID=gene-CCO46_RS04510;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=CCO46_RS04510;old_locus_tag=CCO46_04505 NZ_NPOH01000003.1 Protein Homology CDS 2109 4061 . - 0 ID=cds-WP_097363248.1;Parent=gene-CCO46_RS04510;Dbxref=GenBank:WP_097363248.1;Name=WP_097363248.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=CCO46_RS04510;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_097363248.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 4388 5188 . + . ID=gene-CCO46_RS04515;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CCO46_RS04515;old_locus_tag=CCO46_04510 NZ_NPOH01000003.1 Protein Homology CDS 4388 5188 . + 0 ID=cds-WP_001237060.1;Parent=gene-CCO46_RS04515;Dbxref=GenBank:WP_001237060.1;Name=WP_001237060.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=CCO46_RS04515;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237060.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 5248 6402 . + . ID=gene-CCO46_RS04520;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CCO46_RS04520;old_locus_tag=CCO46_04515 NZ_NPOH01000003.1 Protein Homology CDS 5248 6402 . + 0 ID=cds-WP_020839480.1;Parent=gene-CCO46_RS04520;Dbxref=GenBank:WP_020839480.1;Name=WP_020839480.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=CCO46_RS04520;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_020839480.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 6407 7627 . + . ID=gene-CCO46_RS04525;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=CCO46_RS04525;old_locus_tag=CCO46_04520 NZ_NPOH01000003.1 Protein Homology CDS 6407 7627 . + 0 ID=cds-WP_000187578.1;Parent=gene-CCO46_RS04525;Dbxref=GenBank:WP_000187578.1;Name=WP_000187578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=CCO46_RS04525;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 7674 8426 . + . ID=gene-CCO46_RS04530;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=CCO46_RS04530;old_locus_tag=CCO46_04525 NZ_NPOH01000003.1 Protein Homology CDS 7674 8426 . + 0 ID=cds-WP_000153143.1;Parent=gene-CCO46_RS04530;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=CCO46_RS04530;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 8716 10380 . + . ID=gene-CCO46_RS04540;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=CCO46_RS04540;old_locus_tag=CCO46_04535 NZ_NPOH01000003.1 Protein Homology CDS 8716 10380 . + 0 ID=cds-WP_000337034.1;Parent=gene-CCO46_RS04540;Dbxref=GenBank:WP_000337034.1;Name=WP_000337034.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=CCO46_RS04540;product=asparagine synthase B;protein_id=WP_000337034.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 10602 10678 . + . ID=gene-CCO46_RS04545;Name=CCO46_RS04545;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS04545;old_locus_tag=CCO46_04540 NZ_NPOH01000003.1 tRNAscan-SE tRNA 10602 10678 . + . ID=rna-CCO46_RS04545;Parent=gene-CCO46_RS04545;anticodon=(pos:10636..10638);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04545;product=tRNA-Met NZ_NPOH01000003.1 tRNAscan-SE exon 10602 10678 . + . ID=exon-CCO46_RS04545-1;Parent=rna-CCO46_RS04545;anticodon=(pos:10636..10638);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04545;product=tRNA-Met NZ_NPOH01000003.1 RefSeq gene 10687 10771 . + . ID=gene-CCO46_RS04550;Name=CCO46_RS04550;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS04550;old_locus_tag=CCO46_04545 NZ_NPOH01000003.1 tRNAscan-SE tRNA 10687 10771 . + . ID=rna-CCO46_RS04550;Parent=gene-CCO46_RS04550;anticodon=(pos:10721..10723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04550;product=tRNA-Leu NZ_NPOH01000003.1 tRNAscan-SE exon 10687 10771 . + . ID=exon-CCO46_RS04550-1;Parent=rna-CCO46_RS04550;anticodon=(pos:10721..10723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04550;product=tRNA-Leu NZ_NPOH01000003.1 RefSeq gene 10795 10869 . + . ID=gene-CCO46_RS04555;Name=CCO46_RS04555;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS04555;old_locus_tag=CCO46_04550 NZ_NPOH01000003.1 tRNAscan-SE tRNA 10795 10869 . + . ID=rna-CCO46_RS04555;Parent=gene-CCO46_RS04555;anticodon=(pos:10827..10829);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04555;product=tRNA-Gln NZ_NPOH01000003.1 tRNAscan-SE exon 10795 10869 . + . ID=exon-CCO46_RS04555-1;Parent=rna-CCO46_RS04555;anticodon=(pos:10827..10829);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04555;product=tRNA-Gln NZ_NPOH01000003.1 RefSeq gene 10905 10979 . + . ID=gene-CCO46_RS04560;Name=CCO46_RS04560;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS04560;old_locus_tag=CCO46_04555 NZ_NPOH01000003.1 tRNAscan-SE tRNA 10905 10979 . + . ID=rna-CCO46_RS04560;Parent=gene-CCO46_RS04560;anticodon=(pos:10937..10939);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04560;product=tRNA-Gln NZ_NPOH01000003.1 tRNAscan-SE exon 10905 10979 . + . ID=exon-CCO46_RS04560-1;Parent=rna-CCO46_RS04560;anticodon=(pos:10937..10939);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04560;product=tRNA-Gln NZ_NPOH01000003.1 RefSeq gene 10995 11071 . + . ID=gene-CCO46_RS04565;Name=CCO46_RS04565;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS04565;old_locus_tag=CCO46_04560 NZ_NPOH01000003.1 tRNAscan-SE tRNA 10995 11071 . + . ID=rna-CCO46_RS04565;Parent=gene-CCO46_RS04565;anticodon=(pos:11029..11031);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04565;product=tRNA-Met NZ_NPOH01000003.1 tRNAscan-SE exon 10995 11071 . + . ID=exon-CCO46_RS04565-1;Parent=rna-CCO46_RS04565;anticodon=(pos:11029..11031);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04565;product=tRNA-Met NZ_NPOH01000003.1 RefSeq gene 11118 11192 . + . ID=gene-CCO46_RS04570;Name=CCO46_RS04570;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS04570;old_locus_tag=CCO46_04565 NZ_NPOH01000003.1 tRNAscan-SE tRNA 11118 11192 . + . ID=rna-CCO46_RS04570;Parent=gene-CCO46_RS04570;anticodon=(pos:11150..11152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04570;product=tRNA-Gln NZ_NPOH01000003.1 tRNAscan-SE exon 11118 11192 . + . ID=exon-CCO46_RS04570-1;Parent=rna-CCO46_RS04570;anticodon=(pos:11150..11152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS04570;product=tRNA-Gln NZ_NPOH01000003.1 RefSeq gene 11328 11903 . + . ID=gene-CCO46_RS04575;Name=CCO46_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04575;old_locus_tag=CCO46_04570 NZ_NPOH01000003.1 Protein Homology CDS 11328 11903 . + 0 ID=cds-WP_094887664.1;Parent=gene-CCO46_RS04575;Dbxref=GenBank:WP_094887664.1;Name=WP_094887664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459664.1;locus_tag=CCO46_RS04575;product=hypothetical protein;protein_id=WP_094887664.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 11970 13145 . - . ID=gene-CCO46_RS04580;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=CCO46_RS04580;old_locus_tag=CCO46_04575 NZ_NPOH01000003.1 Protein Homology CDS 11970 13145 . - 0 ID=cds-WP_094887665.1;Parent=gene-CCO46_RS04580;Dbxref=GenBank:WP_094887665.1;Name=WP_094887665.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=CCO46_RS04580;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_094887665.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 13289 14713 . + . ID=gene-CCO46_RS04585;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CCO46_RS04585;old_locus_tag=CCO46_04580 NZ_NPOH01000003.1 Protein Homology CDS 13289 14713 . + 0 ID=cds-WP_080194411.1;Parent=gene-CCO46_RS04585;Dbxref=GenBank:WP_080194411.1;Name=WP_080194411.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=CCO46_RS04585;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_080194411.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 14918 15964 . + . ID=gene-CCO46_RS04590;Name=CCO46_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04590;old_locus_tag=CCO46_04585 NZ_NPOH01000003.1 Protein Homology CDS 14918 15964 . + 0 ID=cds-WP_001018045.1;Parent=gene-CCO46_RS04590;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=CCO46_RS04590;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 15961 16434 . + . ID=gene-CCO46_RS04595;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CCO46_RS04595;old_locus_tag=CCO46_04590 NZ_NPOH01000003.1 Protein Homology CDS 15961 16434 . + 0 ID=cds-WP_000084477.1;Parent=gene-CCO46_RS04595;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=CCO46_RS04595;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 16592 17470 . + . ID=gene-CCO46_RS04600;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=CCO46_RS04600;old_locus_tag=CCO46_04595 NZ_NPOH01000003.1 Protein Homology CDS 16592 17470 . + 0 ID=cds-WP_001278615.1;Parent=gene-CCO46_RS04600;Dbxref=GenBank:WP_001278615.1;Name=WP_001278615.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=CCO46_RS04600;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278615.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 17490 19028 . + . ID=gene-CCO46_RS04605;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=CCO46_RS04605;old_locus_tag=CCO46_04600 NZ_NPOH01000003.1 Protein Homology CDS 17490 19028 . + 0 ID=cds-WP_024134114.1;Parent=gene-CCO46_RS04605;Dbxref=GenBank:WP_024134114.1;Name=WP_024134114.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=CCO46_RS04605;product=apolipoprotein N-acyltransferase;protein_id=WP_024134114.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 19446 20354 . + . ID=gene-CCO46_RS04610;Name=CCO46_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04610;old_locus_tag=CCO46_04605 NZ_NPOH01000003.1 Protein Homology CDS 19446 20354 . + 0 ID=cds-WP_001518176.1;Parent=gene-CCO46_RS04610;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=CCO46_RS04610;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 20514 21254 . + . ID=gene-CCO46_RS04615;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=CCO46_RS04615;old_locus_tag=CCO46_04610 NZ_NPOH01000003.1 Protein Homology CDS 20514 21254 . + 0 ID=cds-WP_000020930.1;Parent=gene-CCO46_RS04615;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=CCO46_RS04615;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 21254 21928 . + . ID=gene-CCO46_RS04620;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=CCO46_RS04620;old_locus_tag=CCO46_04615 NZ_NPOH01000003.1 Protein Homology CDS 21254 21928 . + 0 ID=cds-WP_000272794.1;Parent=gene-CCO46_RS04620;Dbxref=GenBank:WP_000272794.1;Name=WP_000272794.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=CCO46_RS04620;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272794.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 21928 22653 . + . ID=gene-CCO46_RS04625;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=CCO46_RS04625;old_locus_tag=CCO46_04620 NZ_NPOH01000003.1 Protein Homology CDS 21928 22653 . + 0 ID=cds-WP_080198144.1;Parent=gene-CCO46_RS04625;Dbxref=GenBank:WP_080198144.1;Name=WP_080198144.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=CCO46_RS04625;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_080198144.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 22770 23705 . + . ID=gene-CCO46_RS04630;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=CCO46_RS04630;old_locus_tag=CCO46_04625 NZ_NPOH01000003.1 Protein Homology CDS 22770 23705 . + 0 ID=cds-WP_094964460.1;Parent=gene-CCO46_RS04630;Dbxref=GenBank:WP_094964460.1;Name=WP_094964460.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=CCO46_RS04630;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_094964460.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 23737 24975 . + . ID=gene-CCO46_RS04635;Name=CCO46_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04635;old_locus_tag=CCO46_04630 NZ_NPOH01000003.1 Protein Homology CDS 23737 24975 . + 0 ID=cds-WP_000498865.1;Parent=gene-CCO46_RS04635;Dbxref=GenBank:WP_000498865.1;Name=WP_000498865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=CCO46_RS04635;product=hypothetical protein;protein_id=WP_000498865.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 25051 26730 . + . ID=gene-CCO46_RS04640;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=CCO46_RS04640;old_locus_tag=CCO46_04635 NZ_NPOH01000003.1 Protein Homology CDS 25051 26730 . + 0 ID=cds-WP_000368026.1;Parent=gene-CCO46_RS04640;Dbxref=GenBank:WP_000368026.1;Name=WP_000368026.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=CCO46_RS04640;product=molecular chaperone HscC;protein_id=WP_000368026.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 26752 28215 . - . ID=gene-CCO46_RS04645;Name=CCO46_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04645;old_locus_tag=CCO46_04640 NZ_NPOH01000003.1 Protein Homology CDS 26752 28215 . - 0 ID=cds-WP_023203089.1;Parent=gene-CCO46_RS04645;Dbxref=GenBank:WP_023203089.1;Name=WP_023203089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=CCO46_RS04645;product=J domain-containing protein;protein_id=WP_023203089.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 28212 28916 . - . ID=gene-CCO46_RS04650;Name=CCO46_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04650;old_locus_tag=CCO46_04645 NZ_NPOH01000003.1 Protein Homology CDS 28212 28916 . - 0 ID=cds-WP_001728306.1;Parent=gene-CCO46_RS04650;Dbxref=GenBank:WP_001728306.1;Name=WP_001728306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=CCO46_RS04650;product=DUF1266 domain-containing protein;protein_id=WP_001728306.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 28928 30361 . - . ID=gene-CCO46_RS04655;Name=CCO46_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04655;old_locus_tag=CCO46_04650 NZ_NPOH01000003.1 Protein Homology CDS 28928 30361 . - 0 ID=cds-WP_023201918.1;Parent=gene-CCO46_RS04655;Dbxref=GenBank:WP_023201918.1;Name=WP_023201918.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=CCO46_RS04655;product=J domain-containing protein;protein_id=WP_023201918.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 30358 31065 . - . ID=gene-CCO46_RS04660;Name=CCO46_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04660;old_locus_tag=CCO46_04655 NZ_NPOH01000003.1 Protein Homology CDS 30358 31065 . - 0 ID=cds-WP_001534204.1;Parent=gene-CCO46_RS04660;Dbxref=GenBank:WP_001534204.1;Name=WP_001534204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=CCO46_RS04660;product=DUF1266 domain-containing protein;protein_id=WP_001534204.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 31190 32185 . + . ID=gene-CCO46_RS04665;Name=CCO46_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04665;old_locus_tag=CCO46_04660 NZ_NPOH01000003.1 Protein Homology CDS 31190 32185 . + 0 ID=cds-WP_023201919.1;Parent=gene-CCO46_RS04665;Dbxref=GenBank:WP_023201919.1;Name=WP_023201919.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001016637.1;locus_tag=CCO46_RS04665;product=SEL1-like repeat protein;protein_id=WP_023201919.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 32214 33155 . - . ID=gene-CCO46_RS04670;Name=CCO46_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04670;old_locus_tag=CCO46_04665 NZ_NPOH01000003.1 Protein Homology CDS 32214 33155 . - 0 ID=cds-WP_001100314.1;Parent=gene-CCO46_RS04670;Dbxref=GenBank:WP_001100314.1;Name=WP_001100314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100314.1;locus_tag=CCO46_RS04670;product=hypothetical protein;protein_id=WP_001100314.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 33237 33710 . - . ID=gene-CCO46_RS04675;Name=CCO46_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04675;old_locus_tag=CCO46_04670 NZ_NPOH01000003.1 Protein Homology CDS 33237 33710 . - 0 ID=cds-WP_001044886.1;Parent=gene-CCO46_RS04675;Dbxref=GenBank:WP_001044886.1;Name=WP_001044886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=CCO46_RS04675;product=zinc ribbon-containing protein;protein_id=WP_001044886.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 33803 35731 . - . ID=gene-CCO46_RS04680;Name=CCO46_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04680;old_locus_tag=CCO46_04675 NZ_NPOH01000003.1 Protein Homology CDS 33803 35731 . - 0 ID=cds-WP_076726256.1;Parent=gene-CCO46_RS04680;Dbxref=GenBank:WP_076726256.1;Name=WP_076726256.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=CCO46_RS04680;product=sigma-54 interaction domain-containing protein;protein_id=WP_076726256.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 35799 36752 . - . ID=gene-CCO46_RS04685;Name=CCO46_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04685;old_locus_tag=CCO46_04680 NZ_NPOH01000003.1 Protein Homology CDS 35799 36752 . - 0 ID=cds-WP_000694477.1;Parent=gene-CCO46_RS04685;Dbxref=GenBank:WP_000694477.1;Name=WP_000694477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=CCO46_RS04685;product=2-keto-3-deoxygluconate permease;protein_id=WP_000694477.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 36802 37974 . - . ID=gene-CCO46_RS04690;Name=CCO46_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04690;old_locus_tag=CCO46_04685 NZ_NPOH01000003.1 Protein Homology CDS 36802 37974 . - 0 ID=cds-WP_001670689.1;Parent=gene-CCO46_RS04690;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=CCO46_RS04690;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 37991 38332 . - . ID=gene-CCO46_RS04695;Name=CCO46_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04695;old_locus_tag=CCO46_04690 NZ_NPOH01000003.1 Protein Homology CDS 37991 38332 . - 0 ID=cds-WP_015632837.1;Parent=gene-CCO46_RS04695;Dbxref=GenBank:WP_015632837.1;Name=WP_015632837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=CCO46_RS04695;product=UxaA family hydrolase;protein_id=WP_015632837.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 38569 41151 . + . ID=gene-CCO46_RS04700;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CCO46_RS04700;old_locus_tag=CCO46_04695 NZ_NPOH01000003.1 Protein Homology CDS 38569 41151 . + 0 ID=cds-WP_001157916.1;Parent=gene-CCO46_RS04700;Dbxref=GenBank:WP_001157916.1;Name=WP_001157916.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=CCO46_RS04700;product=leucine--tRNA ligase;protein_id=WP_001157916.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 41166 41756 . + . ID=gene-CCO46_RS04705;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=CCO46_RS04705;old_locus_tag=CCO46_04700 NZ_NPOH01000003.1 Protein Homology CDS 41166 41756 . + 0 ID=cds-WP_001269950.1;Parent=gene-CCO46_RS04705;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=CCO46_RS04705;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 41756 42787 . + . ID=gene-CCO46_RS04710;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CCO46_RS04710;old_locus_tag=CCO46_04705 NZ_NPOH01000003.1 Protein Homology CDS 41756 42787 . + 0 ID=cds-WP_000620491.1;Parent=gene-CCO46_RS04710;Dbxref=GenBank:WP_000620491.1;Name=WP_000620491.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=CCO46_RS04710;product=DNA polymerase III subunit delta;protein_id=WP_000620491.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 42789 43430 . + . ID=gene-CCO46_RS04715;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CCO46_RS04715;old_locus_tag=CCO46_04710 NZ_NPOH01000003.1 Protein Homology CDS 42789 43430 . + 0 ID=cds-WP_001518902.1;Parent=gene-CCO46_RS04715;Dbxref=GenBank:WP_001518902.1;Name=WP_001518902.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=CCO46_RS04715;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001518902.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 43405 44499 . - . ID=gene-CCO46_RS04720;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=CCO46_RS04720;old_locus_tag=CCO46_04715 NZ_NPOH01000003.1 Protein Homology CDS 43405 44499 . - 0 ID=cds-WP_097363249.1;Parent=gene-CCO46_RS04720;Dbxref=GenBank:WP_097363249.1;Name=WP_097363249.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=CCO46_RS04720;product=threonine-phosphate decarboxylase CobD;protein_id=WP_097363249.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 44596 45204 . + . ID=gene-CCO46_RS04725;Name=CCO46_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04725;old_locus_tag=CCO46_04720 NZ_NPOH01000003.1 Protein Homology CDS 44596 45204 . + 0 ID=cds-WP_001241922.1;Parent=gene-CCO46_RS04725;Dbxref=GenBank:WP_001241922.1;Name=WP_001241922.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=CCO46_RS04725;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241922.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 45533 45850 . + . ID=gene-CCO46_RS04730;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CCO46_RS04730;old_locus_tag=CCO46_04725 NZ_NPOH01000003.1 Protein Homology CDS 45533 45850 . + 0 ID=cds-WP_001161670.1;Parent=gene-CCO46_RS04730;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=CCO46_RS04730;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 45854 46321 . + . ID=gene-CCO46_RS04735;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CCO46_RS04735;old_locus_tag=CCO46_04730 NZ_NPOH01000003.1 Protein Homology CDS 45854 46321 . + 0 ID=cds-WP_000776107.1;Parent=gene-CCO46_RS04735;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=CCO46_RS04735;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 46352 48253 . + . ID=gene-CCO46_RS04740;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO46_RS04740;old_locus_tag=CCO46_04735 NZ_NPOH01000003.1 Protein Homology CDS 46352 48253 . + 0 ID=cds-WP_023201921.1;Parent=gene-CCO46_RS04740;Dbxref=GenBank:WP_023201921.1;Name=WP_023201921.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=CCO46_RS04740;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_023201921.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 48256 49368 . + . ID=gene-CCO46_RS04745;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=CCO46_RS04745;old_locus_tag=CCO46_04740 NZ_NPOH01000003.1 Protein Homology CDS 48256 49368 . + 0 ID=cds-WP_000131713.1;Parent=gene-CCO46_RS04745;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=CCO46_RS04745;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 49379 50512 . + . ID=gene-CCO46_RS04750;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=CCO46_RS04750;old_locus_tag=CCO46_04745 NZ_NPOH01000003.1 Protein Homology CDS 49379 50512 . + 0 ID=cds-WP_023201922.1;Parent=gene-CCO46_RS04750;Dbxref=GenBank:WP_023201922.1;Name=WP_023201922.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=CCO46_RS04750;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_023201922.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 50652 51863 . + . ID=gene-CCO46_RS04755;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=CCO46_RS04755;old_locus_tag=CCO46_04750 NZ_NPOH01000003.1 Protein Homology CDS 50652 51863 . + 0 ID=cds-WP_000858711.1;Parent=gene-CCO46_RS04755;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=CCO46_RS04755;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 51971 52234 . + . ID=gene-CCO46_RS04760;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=CCO46_RS04760;old_locus_tag=CCO46_04755 NZ_NPOH01000003.1 Protein Homology CDS 51971 52234 . + 0 ID=cds-WP_000850547.1;Parent=gene-CCO46_RS04760;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=CCO46_RS04760;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 52334 52975 . + . ID=gene-CCO46_RS04765;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=CCO46_RS04765;old_locus_tag=CCO46_04760 NZ_NPOH01000003.1 Protein Homology CDS 52334 52975 . + 0 ID=cds-WP_080207838.1;Parent=gene-CCO46_RS04765;Dbxref=GenBank:WP_080207838.1;Name=WP_080207838.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=CCO46_RS04765;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_080207838.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 53277 54230 . + . ID=gene-CCO46_RS04770;Name=CCO46_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04770;old_locus_tag=CCO46_04765 NZ_NPOH01000003.1 Protein Homology CDS 53277 54230 . + 0 ID=cds-WP_080160307.1;Parent=gene-CCO46_RS04770;Dbxref=GenBank:WP_080160307.1;Name=WP_080160307.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=CCO46_RS04770;product=YbeF family transcriptional regulator;protein_id=WP_080160307.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 54436 55401 . + . ID=gene-CCO46_RS04775;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CCO46_RS04775;old_locus_tag=CCO46_04770 NZ_NPOH01000003.1 Protein Homology CDS 54436 55401 . + 0 ID=cds-WP_000042640.1;Parent=gene-CCO46_RS04775;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=CCO46_RS04775;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 55487 55690 . - . ID=gene-CCO46_RS04780;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=CCO46_RS04780;old_locus_tag=CCO46_04775 NZ_NPOH01000003.1 Protein Homology CDS 55487 55690 . - 0 ID=cds-WP_000503938.1;Parent=gene-CCO46_RS04780;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=CCO46_RS04780;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 55819 56607 . - . ID=gene-CCO46_RS04785;Name=CCO46_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04785;old_locus_tag=CCO46_04780 NZ_NPOH01000003.1 Protein Homology CDS 55819 56607 . - 0 ID=cds-WP_058331940.1;Parent=gene-CCO46_RS04785;Dbxref=GenBank:WP_058331940.1;Name=WP_058331940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=CCO46_RS04785;product=deaminated glutathione amidase;protein_id=WP_058331940.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 56698 57081 . + . ID=gene-CCO46_RS04790;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CCO46_RS04790;old_locus_tag=CCO46_04785 NZ_NPOH01000003.1 Protein Homology CDS 56698 57081 . + 0 ID=cds-WP_000939753.1;Parent=gene-CCO46_RS04790;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=CCO46_RS04790;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 57139 57348 . - . ID=gene-CCO46_RS04795;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO46_RS04795;old_locus_tag=CCO46_04790 NZ_NPOH01000003.1 Protein Homology CDS 57139 57348 . - 0 ID=cds-WP_000034826.1;Parent=gene-CCO46_RS04795;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=CCO46_RS04795;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 57536 58108 . - . ID=gene-CCO46_RS04800;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=CCO46_RS04800;old_locus_tag=CCO46_04795 NZ_NPOH01000003.1 Protein Homology CDS 57536 58108 . - 0 ID=cds-WP_001623090.1;Parent=gene-CCO46_RS04800;Dbxref=GenBank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=CCO46_RS04800;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 58487 59875 . + . ID=gene-CCO46_RS04810;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=CCO46_RS04810;old_locus_tag=CCO46_04805 NZ_NPOH01000003.1 Protein Homology CDS 58487 59875 . + 0 ID=cds-WP_097363250.1;Parent=gene-CCO46_RS04810;Dbxref=GenBank:WP_097363250.1;Name=WP_097363250.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=CCO46_RS04810;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_097363250.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 59926 60606 . - . ID=gene-CCO46_RS04815;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=CCO46_RS04815;old_locus_tag=CCO46_04810 NZ_NPOH01000003.1 Protein Homology CDS 59926 60606 . - 0 ID=cds-WP_094964458.1;Parent=gene-CCO46_RS04815;Dbxref=GenBank:WP_094964458.1;Name=WP_094964458.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=CCO46_RS04815;product=two-component response regulator DpiA;protein_id=WP_094964458.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 60575 62236 . - . ID=gene-CCO46_RS04820;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=CCO46_RS04820;old_locus_tag=CCO46_04815 NZ_NPOH01000003.1 Protein Homology CDS 60575 62236 . - 0 ID=cds-WP_053299977.1;Parent=gene-CCO46_RS04820;Dbxref=GenBank:WP_053299977.1;Name=WP_053299977.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=CCO46_RS04820;product=sensor histidine kinase DpiB;protein_id=WP_053299977.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 62621 63697 . + . ID=gene-CCO46_RS04830;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO46_RS04830;old_locus_tag=CCO46_04825 NZ_NPOH01000003.1 Protein Homology CDS 62621 63697 . + 0 ID=cds-WP_058331942.1;Parent=gene-CCO46_RS04830;Dbxref=GenBank:WP_058331942.1;Name=WP_058331942.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=CCO46_RS04830;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_058331942.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 63694 63990 . + . ID=gene-CCO46_RS04835;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO46_RS04835;old_locus_tag=CCO46_04830 NZ_NPOH01000003.1 Protein Homology CDS 63694 63990 . + 0 ID=cds-WP_000700679.1;Parent=gene-CCO46_RS04835;Dbxref=GenBank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=CCO46_RS04835;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 63987 64895 . + . ID=gene-CCO46_RS04840;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO46_RS04840;old_locus_tag=CCO46_04835 NZ_NPOH01000003.1 Protein Homology CDS 63987 64895 . + 0 ID=cds-WP_000622349.1;Parent=gene-CCO46_RS04840;Dbxref=GenBank:WP_000622349.1;Name=WP_000622349.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=CCO46_RS04840;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622349.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 64905 66434 . + . ID=gene-CCO46_RS04845;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO46_RS04845;old_locus_tag=CCO46_04840 NZ_NPOH01000003.1 Protein Homology CDS 64905 66434 . + 0 ID=cds-WP_000192323.1;Parent=gene-CCO46_RS04845;Dbxref=GenBank:WP_000192323.1;Name=WP_000192323.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=CCO46_RS04845;product=citrate lyase subunit alpha;protein_id=WP_000192323.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 66438 66989 . + . ID=gene-CCO46_RS04850;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO46_RS04850;old_locus_tag=CCO46_04845 NZ_NPOH01000003.1 Protein Homology CDS 66438 66989 . + 0 ID=cds-WP_001236064.1;Parent=gene-CCO46_RS04850;Dbxref=GenBank:WP_001236064.1;Name=WP_001236064.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=CCO46_RS04850;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_001236064.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 66961 67857 . + . ID=gene-CCO46_RS04855;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO46_RS04855;old_locus_tag=CCO46_04850 NZ_NPOH01000003.1 Protein Homology CDS 66961 67857 . + 0 ID=cds-WP_000982652.1;Parent=gene-CCO46_RS04855;Dbxref=GenBank:WP_000982652.1;Name=WP_000982652.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=CCO46_RS04855;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982652.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 67895 69358 . + . ID=gene-CCO46_RS04860;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=CCO46_RS04860;old_locus_tag=CCO46_04855 NZ_NPOH01000003.1 Protein Homology CDS 67895 69358 . + 0 ID=cds-WP_000059040.1;Parent=gene-CCO46_RS04860;Dbxref=GenBank:WP_000059040.1;Name=WP_000059040.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=CCO46_RS04860;product=citrate/succinate antiporter CitT;protein_id=WP_000059040.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 69468 70274 . + . ID=gene-CCO46_RS04865;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=CCO46_RS04865;old_locus_tag=CCO46_04860 NZ_NPOH01000003.1 Protein Homology CDS 69468 70274 . + 0 ID=cds-WP_001092585.1;Parent=gene-CCO46_RS04865;Dbxref=GenBank:WP_001092585.1;Name=WP_001092585.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=CCO46_RS04865;product=ribonuclease I;protein_id=WP_001092585.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 70509 70919 . + . ID=gene-CCO46_RS04875;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=CCO46_RS04875;old_locus_tag=CCO46_04870 NZ_NPOH01000003.1 Protein Homology CDS 70509 70919 . + 0 ID=cds-WP_000089748.1;Parent=gene-CCO46_RS04875;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=CCO46_RS04875;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 71002 72240 . - . ID=gene-CCO46_RS04880;Name=CCO46_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04880;old_locus_tag=CCO46_04875 NZ_NPOH01000003.1 Protein Homology CDS 71002 72240 . - 0 ID=cds-WP_094964457.1;Parent=gene-CCO46_RS04880;Dbxref=GenBank:WP_094964457.1;Name=WP_094964457.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=CCO46_RS04880;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_094964457.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 72463 72891 . + . ID=gene-CCO46_RS04885;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=CCO46_RS04885;old_locus_tag=CCO46_04880 NZ_NPOH01000003.1 Protein Homology CDS 72463 72891 . + 0 ID=cds-WP_000278499.1;Parent=gene-CCO46_RS04885;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=CCO46_RS04885;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 72959 73726 . - . ID=gene-CCO46_RS04890;Name=CCO46_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04890;old_locus_tag=CCO46_04885 NZ_NPOH01000003.1 Protein Homology CDS 72959 73726 . - 0 ID=cds-WP_061372199.1;Parent=gene-CCO46_RS04890;Dbxref=GenBank:WP_061372199.1;Name=WP_061372199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=CCO46_RS04890;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_061372199.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 73726 74283 . - . ID=gene-CCO46_RS04895;Name=CCO46_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04895;old_locus_tag=CCO46_04890 NZ_NPOH01000003.1 Protein Homology CDS 73726 74283 . - 0 ID=cds-WP_023218842.1;Parent=gene-CCO46_RS04895;Dbxref=GenBank:WP_023218842.1;Name=WP_023218842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=CCO46_RS04895;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_023218842.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 74280 76559 . - . ID=gene-CCO46_RS04900;Name=CCO46_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04900;old_locus_tag=CCO46_04895 NZ_NPOH01000003.1 Protein Homology CDS 74280 76559 . - 0 ID=cds-WP_080207833.1;Parent=gene-CCO46_RS04900;Dbxref=GenBank:WP_080207833.1;Name=WP_080207833.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=CCO46_RS04900;product=molybdopterin-dependent oxidoreductase;protein_id=WP_080207833.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 76552 77112 . - . ID=gene-CCO46_RS04905;Name=CCO46_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04905;old_locus_tag=CCO46_04900 NZ_NPOH01000003.1 Protein Homology CDS 76552 77112 . - 0 ID=cds-WP_000377444.1;Parent=gene-CCO46_RS04905;Dbxref=GenBank:WP_000377444.1;Name=WP_000377444.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=CCO46_RS04905;product=TorD/DmsD family molecular chaperone;protein_id=WP_000377444.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 77445 79010 . - . ID=gene-CCO46_RS04910;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CCO46_RS04910;old_locus_tag=CCO46_04905 NZ_NPOH01000003.1 Protein Homology CDS 77445 79010 . - 0 ID=cds-WP_000887644.1;Parent=gene-CCO46_RS04910;Dbxref=GenBank:WP_000887644.1;Name=WP_000887644.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=CCO46_RS04910;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887644.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 79252 79815 . - . ID=gene-CCO46_RS04915;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CCO46_RS04915;old_locus_tag=CCO46_04910 NZ_NPOH01000003.1 Protein Homology CDS 79252 79815 . - 0 ID=cds-WP_000052802.1;Parent=gene-CCO46_RS04915;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=CCO46_RS04915;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 80256 81002 . + . ID=gene-CCO46_RS04920;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=CCO46_RS04920;old_locus_tag=CCO46_04915 NZ_NPOH01000003.1 Protein Homology CDS 80256 81002 . + 0 ID=cds-WP_000597122.1;Parent=gene-CCO46_RS04920;Dbxref=GenBank:WP_000597122.1;Name=WP_000597122.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=CCO46_RS04920;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000597122.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 81319 82221 . + . ID=gene-CCO46_RS04930;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;locus_tag=CCO46_RS04930;old_locus_tag=CCO46_04925 NZ_NPOH01000003.1 Protein Homology CDS 81319 82221 . + 0 ID=cds-WP_000002503.1;Parent=gene-CCO46_RS04930;Dbxref=GenBank:WP_000002503.1;Name=WP_000002503.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=CCO46_RS04930;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002503.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 82387 83622 . + . ID=gene-CCO46_RS04935;Name=CCO46_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04935;old_locus_tag=CCO46_04930 NZ_NPOH01000003.1 Protein Homology CDS 82387 83622 . + 0 ID=cds-WP_000118142.1;Parent=gene-CCO46_RS04935;Dbxref=GenBank:WP_000118142.1;Name=WP_000118142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=CCO46_RS04935;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118142.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 83595 84212 . + . ID=gene-CCO46_RS04940;Name=CCO46_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04940;old_locus_tag=CCO46_04935 NZ_NPOH01000003.1 Protein Homology CDS 83595 84212 . + 0 ID=cds-WP_001164755.1;Parent=gene-CCO46_RS04940;Dbxref=GenBank:WP_001164755.1;Name=WP_001164755.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=CCO46_RS04940;product=IbrB-like domain-containing protein;protein_id=WP_001164755.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 84213 85373 . - . ID=gene-CCO46_RS04945;Name=CCO46_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04945;old_locus_tag=CCO46_04940 NZ_NPOH01000003.1 Protein Homology CDS 84213 85373 . - 0 ID=cds-WP_001245605.1;Parent=gene-CCO46_RS04945;Dbxref=GenBank:WP_001245605.1;Name=WP_001245605.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=CCO46_RS04945;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_001245605.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 85500 86588 . + . ID=gene-CCO46_RS04950;Name=CCO46_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04950;old_locus_tag=CCO46_04945 NZ_NPOH01000003.1 Protein Homology CDS 85500 86588 . + 0 ID=cds-WP_058331945.1;Parent=gene-CCO46_RS04950;Dbxref=GenBank:WP_058331945.1;Name=WP_058331945.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=CCO46_RS04950;product=oxidoreductase;protein_id=WP_058331945.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 86624 86821 . - . ID=gene-CCO46_RS04955;Name=CCO46_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04955;old_locus_tag=CCO46_04950 NZ_NPOH01000003.1 Protein Homology CDS 86624 86821 . - 0 ID=cds-WP_000460619.1;Parent=gene-CCO46_RS04955;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=CCO46_RS04955;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 86885 88990 . - . ID=gene-CCO46_RS04960;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=CCO46_RS04960;old_locus_tag=CCO46_04955 NZ_NPOH01000003.1 Protein Homology CDS 86885 88990 . - 0 ID=cds-WP_001043108.1;Parent=gene-CCO46_RS04960;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=CCO46_RS04960;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 89172 89585 . - . ID=gene-CCO46_RS04965;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=CCO46_RS04965;old_locus_tag=CCO46_04960 NZ_NPOH01000003.1 Protein Homology CDS 89172 89585 . - 0 ID=cds-WP_000637966.1;Parent=gene-CCO46_RS04965;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=CCO46_RS04965;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 89588 90343 . - . ID=gene-CCO46_RS04970;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=CCO46_RS04970;old_locus_tag=CCO46_04965 NZ_NPOH01000003.1 Protein Homology CDS 89588 90343 . - 0 ID=cds-WP_080207832.1;Parent=gene-CCO46_RS04970;Dbxref=GenBank:WP_080207832.1;Name=WP_080207832.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=CCO46_RS04970;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_080207832.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 90343 91200 . - . ID=gene-CCO46_RS04975;Name=CCO46_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS04975;old_locus_tag=CCO46_04970 NZ_NPOH01000003.1 Protein Homology CDS 90343 91200 . - 0 ID=cds-WP_001007166.1;Parent=gene-CCO46_RS04975;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=CCO46_RS04975;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 91214 92824 . - . ID=gene-CCO46_RS04980;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=CCO46_RS04980;old_locus_tag=CCO46_04975 NZ_NPOH01000003.1 Protein Homology CDS 91214 92824 . - 0 ID=cds-WP_001222447.1;Parent=gene-CCO46_RS04980;Dbxref=GenBank:WP_001222447.1;Name=WP_001222447.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=CCO46_RS04980;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_001222447.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 92834 94009 . - . ID=gene-CCO46_RS04985;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=CCO46_RS04985;old_locus_tag=CCO46_04980 NZ_NPOH01000003.1 Protein Homology CDS 92834 94009 . - 0 ID=cds-WP_000367596.1;Parent=gene-CCO46_RS04985;Dbxref=GenBank:WP_000367596.1;Name=WP_000367596.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=CCO46_RS04985;product=isochorismate synthase EntC;protein_id=WP_000367596.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 94318 95274 . + . ID=gene-CCO46_RS04990;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=CCO46_RS04990;old_locus_tag=CCO46_04985 NZ_NPOH01000003.1 Protein Homology CDS 94318 95274 . + 0 ID=cds-WP_097363251.1;Parent=gene-CCO46_RS04990;Dbxref=GenBank:WP_097363251.1;Name=WP_097363251.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=CCO46_RS04990;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_097363251.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 95337 96581 . - . ID=gene-CCO46_RS04995;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=CCO46_RS04995;old_locus_tag=CCO46_04990 NZ_NPOH01000003.1 Protein Homology CDS 95337 96581 . - 0 ID=cds-WP_001081661.1;Parent=gene-CCO46_RS04995;Dbxref=GenBank:WP_001081661.1;Name=WP_001081661.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=CCO46_RS04995;product=enterobactin transporter EntS;protein_id=WP_001081661.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 96692 97699 . + . ID=gene-CCO46_RS05000;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=CCO46_RS05000;old_locus_tag=CCO46_04995 NZ_NPOH01000003.1 Protein Homology CDS 96692 97699 . + 0 ID=cds-WP_001277870.1;Parent=gene-CCO46_RS05000;Dbxref=GenBank:WP_001277870.1;Name=WP_001277870.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=CCO46_RS05000;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277870.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 97699 98688 . + . ID=gene-CCO46_RS05005;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=CCO46_RS05005;old_locus_tag=CCO46_05000 NZ_NPOH01000003.1 Protein Homology CDS 97699 98688 . + 0 ID=cds-WP_000480064.1;Parent=gene-CCO46_RS05005;Dbxref=GenBank:WP_000480064.1;Name=WP_000480064.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=CCO46_RS05005;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480064.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 98685 99479 . + . ID=gene-CCO46_RS05010;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=CCO46_RS05010;old_locus_tag=CCO46_05005 NZ_NPOH01000003.1 Protein Homology CDS 98685 99479 . + 0 ID=cds-WP_000140620.1;Parent=gene-CCO46_RS05010;Dbxref=GenBank:WP_000140620.1;Name=WP_000140620.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=CCO46_RS05010;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140620.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 99531 100667 . - . ID=gene-CCO46_RS05015;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=CCO46_RS05015;old_locus_tag=CCO46_05010 NZ_NPOH01000003.1 Protein Homology CDS 99531 100667 . - 0 ID=cds-WP_001139579.1;Parent=gene-CCO46_RS05015;Dbxref=GenBank:WP_001139579.1;Name=WP_001139579.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=CCO46_RS05015;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_001139579.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 100917 104801 . - . ID=gene-CCO46_RS05020;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=CCO46_RS05020;old_locus_tag=CCO46_05015 NZ_NPOH01000003.1 Protein Homology CDS 100917 104801 . - 0 ID=cds-WP_097363252.1;Parent=gene-CCO46_RS05020;Dbxref=GenBank:WP_097363252.1;Name=WP_097363252.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=CCO46_RS05020;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_097363252.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 104798 105016 . - . ID=gene-CCO46_RS05025;Name=CCO46_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05025;old_locus_tag=CCO46_05020 NZ_NPOH01000003.1 Protein Homology CDS 104798 105016 . - 0 ID=cds-WP_000396006.1;Parent=gene-CCO46_RS05025;Dbxref=GenBank:WP_000396006.1;Name=WP_000396006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=CCO46_RS05025;product=MbtH family protein;protein_id=WP_000396006.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 105047 106261 . - . ID=gene-CCO46_RS05030;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=CCO46_RS05030;old_locus_tag=CCO46_05025 NZ_NPOH01000003.1 Protein Homology CDS 105047 106261 . - 0 ID=cds-WP_024797995.1;Parent=gene-CCO46_RS05030;Dbxref=GenBank:WP_024797995.1;Name=WP_024797995.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=CCO46_RS05030;product=enterochelin esterase;protein_id=WP_024797995.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 106450 108705 . + . ID=gene-CCO46_RS05035;Name=CCO46_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05035;old_locus_tag=CCO46_05030 NZ_NPOH01000003.1 Protein Homology CDS 106450 108705 . + 0 ID=cds-WP_001034966.1;Parent=gene-CCO46_RS05035;Dbxref=GenBank:WP_001034966.1;Name=WP_001034966.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=CCO46_RS05035;product=TonB-dependent siderophore receptor;protein_id=WP_001034966.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 108751 109455 . + . ID=gene-CCO46_RS05040;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=CCO46_RS05040;old_locus_tag=CCO46_05035 NZ_NPOH01000003.1 Protein Homology CDS 108751 109455 . + 0 ID=cds-WP_023231626.1;Parent=gene-CCO46_RS05040;Dbxref=GenBank:WP_023231626.1;Name=WP_023231626.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=CCO46_RS05040;product=enterobactin synthase subunit EntD;protein_id=WP_023231626.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 109467 110585 . + . ID=gene-CCO46_RS05045;Name=CCO46_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05045;old_locus_tag=CCO46_05040 NZ_NPOH01000003.1 Protein Homology CDS 109467 110585 . + 0 ID=cds-WP_001196910.1;Parent=gene-CCO46_RS05045;Dbxref=GenBank:WP_001196910.1;Name=WP_001196910.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=CCO46_RS05045;product=YbdK family carboxylate-amine ligase;protein_id=WP_001196910.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 110652 110900 . + . ID=gene-CCO46_RS05050;Name=CCO46_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05050;old_locus_tag=CCO46_05045 NZ_NPOH01000003.1 Protein Homology CDS 110652 110900 . + 0 ID=cds-WP_000682497.1;Parent=gene-CCO46_RS05050;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=CCO46_RS05050;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 110906 111247 . - . ID=gene-CCO46_RS05055;Name=CCO46_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05055;old_locus_tag=CCO46_05050 NZ_NPOH01000003.1 Protein Homology CDS 110906 111247 . - 0 ID=cds-WP_000155633.1;Parent=gene-CCO46_RS05055;Dbxref=GenBank:WP_000155633.1;Name=WP_000155633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=CCO46_RS05055;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155633.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 111536 112117 . + . ID=gene-CCO46_RS05060;Name=CCO46_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05060;old_locus_tag=CCO46_05055 NZ_NPOH01000003.1 Protein Homology CDS 111536 112117 . + 0 ID=cds-WP_000113609.1;Parent=gene-CCO46_RS05060;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=CCO46_RS05060;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 112117 112485 . + . ID=gene-CCO46_RS05065;Name=CCO46_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05065;old_locus_tag=CCO46_05060 NZ_NPOH01000003.1 Protein Homology CDS 112117 112485 . + 0 ID=cds-WP_000348989.1;Parent=gene-CCO46_RS05065;Dbxref=GenBank:WP_000348989.1;Name=WP_000348989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=CCO46_RS05065;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348989.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 112582 113235 . + . ID=gene-CCO46_RS05070;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=CCO46_RS05070;old_locus_tag=CCO46_05065 NZ_NPOH01000003.1 Protein Homology CDS 112582 113235 . + 0 ID=cds-WP_001529050.1;Parent=gene-CCO46_RS05070;Dbxref=GenBank:WP_001529050.1;Name=WP_001529050.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=CCO46_RS05070;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_001529050.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 113435 113884 . + . ID=gene-CCO46_RS05075;Name=CCO46_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05075;old_locus_tag=CCO46_05070 NZ_NPOH01000003.1 Protein Homology CDS 113435 113884 . + 0 ID=cds-WP_001216659.1;Parent=gene-CCO46_RS05075;Dbxref=GenBank:WP_001216659.1;Name=WP_001216659.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459569.1;locus_tag=CCO46_RS05075;product=PTS sugar transporter subunit IIA;protein_id=WP_001216659.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 113862 114332 . + . ID=gene-CCO46_RS05080;Name=CCO46_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05080;old_locus_tag=CCO46_05075 NZ_NPOH01000003.1 Protein Homology CDS 113862 114332 . + 0 ID=cds-WP_000594177.1;Parent=gene-CCO46_RS05080;Dbxref=GenBank:WP_000594177.1;Name=WP_000594177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459568.1;locus_tag=CCO46_RS05080;product=PTS sugar transporter subunit IIB;protein_id=WP_000594177.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 114347 115090 . + . ID=gene-CCO46_RS05085;Name=CCO46_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05085;old_locus_tag=CCO46_05080 NZ_NPOH01000003.1 Protein Homology CDS 114347 115090 . + 0 ID=cds-WP_000927523.1;Parent=gene-CCO46_RS05085;Dbxref=GenBank:WP_000927523.1;Name=WP_000927523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459567.1;locus_tag=CCO46_RS05085;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000927523.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 115093 115947 . + . ID=gene-CCO46_RS05090;Name=CCO46_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05090;old_locus_tag=CCO46_05085 NZ_NPOH01000003.1 Protein Homology CDS 115093 115947 . + 0 ID=cds-WP_000005802.1;Parent=gene-CCO46_RS05090;Dbxref=GenBank:WP_000005802.1;Name=WP_000005802.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459566.1;locus_tag=CCO46_RS05090;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000005802.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 115980 117023 . + . ID=gene-CCO46_RS05095;Name=CCO46_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05095;old_locus_tag=CCO46_05090 NZ_NPOH01000003.1 Protein Homology CDS 115980 117023 . + 0 ID=cds-WP_097363269.1;Parent=gene-CCO46_RS05095;Dbxref=GenBank:WP_097363269.1;Name=WP_097363269.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459565.1;locus_tag=CCO46_RS05095;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=WP_097363269.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 117090 118076 . + . ID=gene-CCO46_RS05100;Name=CCO46_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05100;old_locus_tag=CCO46_05095 NZ_NPOH01000003.1 Protein Homology CDS 117090 118076 . + 0 ID=cds-WP_000109361.1;Parent=gene-CCO46_RS05100;Dbxref=GenBank:WP_000109361.1;Name=WP_000109361.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459564.1;locus_tag=CCO46_RS05100;product=SIS domain-containing protein;protein_id=WP_000109361.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 118204 120933 . - . ID=gene-CCO46_RS05105;Name=CCO46_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05105;old_locus_tag=CCO46_05100 NZ_NPOH01000003.1 Protein Homology CDS 118204 120933 . - 0 ID=cds-WP_079944467.1;Parent=gene-CCO46_RS05105;Dbxref=GenBank:WP_079944467.1;Name=WP_079944467.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=CCO46_RS05105;product=sigma 54-interacting transcriptional regulator;protein_id=WP_079944467.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 121100 123070 . - . ID=gene-CCO46_RS05110;Name=CCO46_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05110;old_locus_tag=CCO46_05105 NZ_NPOH01000003.1 Protein Homology CDS 121100 123070 . - 0 ID=cds-WP_097363253.1;Parent=gene-CCO46_RS05110;Dbxref=GenBank:WP_097363253.1;Name=WP_097363253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=CCO46_RS05110;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_097363253.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 123381 124628 . + . ID=gene-CCO46_RS05120;Name=CCO46_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05120;old_locus_tag=CCO46_05115 NZ_NPOH01000003.1 Protein Homology CDS 123381 124628 . + 0 ID=cds-WP_001156978.1;Parent=gene-CCO46_RS05120;Dbxref=GenBank:WP_001156978.1;Name=WP_001156978.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=CCO46_RS05120;product=mechanosensitive ion channel family protein;protein_id=WP_001156978.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 124670 126064 . - . ID=gene-CCO46_RS05125;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=CCO46_RS05125;old_locus_tag=CCO46_05120 NZ_NPOH01000003.1 Protein Homology CDS 124670 126064 . - 0 ID=cds-WP_097363254.1;Parent=gene-CCO46_RS05125;Dbxref=GenBank:WP_097363254.1;Name=WP_097363254.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=CCO46_RS05125;product=phenylalanine transporter;protein_id=WP_097363254.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 126390 127565 . + . ID=gene-CCO46_RS05130;Name=CCO46_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05130;old_locus_tag=CCO46_05125 NZ_NPOH01000003.1 Protein Homology CDS 126390 127565 . + 0 ID=cds-WP_094887672.1;Parent=gene-CCO46_RS05130;Dbxref=GenBank:WP_094887672.1;Name=WP_094887672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=CCO46_RS05130;product=DnaJ family molecular chaperone;protein_id=WP_094887672.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 127644 128204 . - . ID=gene-CCO46_RS05135;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=CCO46_RS05135;old_locus_tag=CCO46_05130 NZ_NPOH01000003.1 Protein Homology CDS 127644 128204 . - 0 ID=cds-WP_000362177.1;Parent=gene-CCO46_RS05135;Dbxref=GenBank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=CCO46_RS05135;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362177.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 128217 128453 . - . ID=gene-CCO46_RS05140;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=CCO46_RS05140;old_locus_tag=CCO46_05135 NZ_NPOH01000003.1 Protein Homology CDS 128217 128453 . - 0 ID=cds-WP_000922173.1;Parent=gene-CCO46_RS05140;Dbxref=GenBank:WP_000922173.1;Name=WP_000922173.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=CCO46_RS05140;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922173.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 128610 129935 . - . ID=gene-CCO46_RS05145;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=CCO46_RS05145;old_locus_tag=CCO46_05140 NZ_NPOH01000003.1 Protein Homology CDS 128610 129935 . - 0 ID=cds-WP_061372190.1;Parent=gene-CCO46_RS05145;Dbxref=GenBank:WP_061372190.1;Name=WP_061372190.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=CCO46_RS05145;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_061372190.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 130151 131005 . + . ID=gene-CCO46_RS05150;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=CCO46_RS05150;old_locus_tag=CCO46_05145 NZ_NPOH01000003.1 Protein Homology CDS 130151 131005 . + 0 ID=cds-WP_000339618.1;Parent=gene-CCO46_RS05150;Dbxref=GenBank:WP_000339618.1;Name=WP_000339618.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=CCO46_RS05150;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339618.1;transl_table=11 NZ_NPOH01000003.1 RefSeq pseudogene 131056 131295 . - . ID=gene-CCO46_RS05155;Name=CCO46_RS05155;end_range=131295,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS05155;old_locus_tag=CCO46_05150;partial=true;pseudo=true NZ_NPOH01000003.1 Protein Homology CDS 131056 131295 . - 0 ID=cds-CCO46_RS05155;Parent=gene-CCO46_RS05155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=131295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=CCO46_RS05155;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000003.1 RefSeq pseudogene 131299 131673 . + . ID=gene-CCO46_RS05160;Name=CCO46_RS05160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS05160;old_locus_tag=CCO46_05155;partial=true;pseudo=true;start_range=.,131299 NZ_NPOH01000003.1 Protein Homology CDS 131299 131673 . + 0 ID=cds-CCO46_RS05160;Parent=gene-CCO46_RS05160;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=CCO46_RS05160;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,131299;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 131909 132118 . + . ID=gene-CCO46_RS05165;Name=CCO46_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05165;old_locus_tag=CCO46_05160 NZ_NPOH01000003.1 Protein Homology CDS 131909 132118 . + 0 ID=cds-WP_139760633.1;Parent=gene-CCO46_RS05165;Dbxref=GenBank:WP_139760633.1;Name=WP_139760633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230236.1;locus_tag=CCO46_RS05165;product=copper-binding protein;protein_id=WP_139760633.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 132543 132905 . + . ID=gene-CCO46_RS05170;Name=CCO46_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05170;old_locus_tag=CCO46_05165 NZ_NPOH01000003.1 Protein Homology CDS 132543 132905 . + 0 ID=cds-WP_023201938.1;Parent=gene-CCO46_RS05170;Dbxref=GenBank:WP_023201938.1;Name=WP_023201938.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=CCO46_RS05170;product=GtrA family protein;protein_id=WP_023201938.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 132902 133822 . + . ID=gene-CCO46_RS05175;Name=CCO46_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05175;old_locus_tag=CCO46_05170 NZ_NPOH01000003.1 Protein Homology CDS 132902 133822 . + 0 ID=cds-WP_023201939.1;Parent=gene-CCO46_RS05175;Dbxref=GenBank:WP_023201939.1;Name=WP_023201939.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703612.1;locus_tag=CCO46_RS05175;product=glycosyltransferase family 2 protein;protein_id=WP_023201939.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 133824 135281 . + . ID=gene-CCO46_RS05180;Name=CCO46_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05180;old_locus_tag=CCO46_05175 NZ_NPOH01000003.1 Protein Homology CDS 133824 135281 . + 0 ID=cds-WP_097363256.1;Parent=gene-CCO46_RS05180;Dbxref=GenBank:WP_097363256.1;Name=WP_097363256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835885.1;locus_tag=CCO46_RS05180;product=glucosyltransferase domain-containing protein;protein_id=WP_097363256.1;transl_table=11 NZ_NPOH01000003.1 RefSeq pseudogene 135453 136509 . - . ID=gene-CCO46_RS05185;Name=CCO46_RS05185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS05185;old_locus_tag=CCO46_05180;pseudo=true NZ_NPOH01000003.1 Protein Homology CDS 135453 136509 . - 0 ID=cds-CCO46_RS05185;Parent=gene-CCO46_RS05185;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=CCO46_RS05185;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 136600 137601 . - . ID=gene-CCO46_RS05190;Name=rfbV;gbkey=Gene;gene=rfbV;gene_biotype=protein_coding;locus_tag=CCO46_RS05190;old_locus_tag=CCO46_05185 NZ_NPOH01000003.1 Protein Homology CDS 136600 137601 . - 0 ID=cds-WP_023201599.1;Parent=gene-CCO46_RS05190;Dbxref=GenBank:WP_023201599.1;Name=WP_023201599.1;gbkey=CDS;gene=rfbV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461032.1;locus_tag=CCO46_RS05190;product=abequosyltransferase RfbV;protein_id=WP_023201599.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 137606 138898 . - . ID=gene-CCO46_RS05195;Name=CCO46_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05195;old_locus_tag=CCO46_05190 NZ_NPOH01000003.1 Protein Homology CDS 137606 138898 . - 0 ID=cds-WP_006497737.1;Parent=gene-CCO46_RS05195;Dbxref=GenBank:WP_006497737.1;Name=WP_006497737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461033.1;locus_tag=CCO46_RS05195;product=MATE family efflux transporter;protein_id=WP_006497737.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 138980 139879 . - . ID=gene-CCO46_RS05200;Name=rfbJ;gbkey=Gene;gene=rfbJ;gene_biotype=protein_coding;locus_tag=CCO46_RS05200;old_locus_tag=CCO46_05195 NZ_NPOH01000003.1 Protein Homology CDS 138980 139879 . - 0 ID=cds-WP_097363257.1;Parent=gene-CCO46_RS05200;Dbxref=GenBank:WP_097363257.1;Name=WP_097363257.1;gbkey=CDS;gene=rfbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461034.1;locus_tag=CCO46_RS05200;product=CDP-abequose synthase;protein_id=WP_097363257.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 139907 141220 . - . ID=gene-CCO46_RS05205;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=CCO46_RS05205;old_locus_tag=CCO46_05200 NZ_NPOH01000003.1 Protein Homology CDS 139907 141220 . - 0 ID=cds-WP_000126349.1;Parent=gene-CCO46_RS05205;Dbxref=GenBank:WP_000126349.1;Name=WP_000126349.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=CCO46_RS05205;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_000126349.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 141247 142326 . - . ID=gene-CCO46_RS05210;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=CCO46_RS05210;old_locus_tag=CCO46_05205 NZ_NPOH01000003.1 Protein Homology CDS 141247 142326 . - 0 ID=cds-WP_000565903.1;Parent=gene-CCO46_RS05210;Dbxref=GenBank:WP_000565903.1;Name=WP_000565903.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=CCO46_RS05210;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_000565903.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 142331 143104 . - . ID=gene-CCO46_RS05215;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=CCO46_RS05215;old_locus_tag=CCO46_05210 NZ_NPOH01000003.1 Protein Homology CDS 142331 143104 . - 0 ID=cds-WP_000648783.1;Parent=gene-CCO46_RS05215;Dbxref=GenBank:WP_000648783.1;Name=WP_000648783.1;Ontology_term=GO:0009243,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=CCO46_RS05215;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_000648783.1;transl_table=11 NZ_NPOH01000003.1 RefSeq pseudogene 143101 144094 . - . ID=gene-CCO46_RS05220;Name=CCO46_RS05220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS05220;old_locus_tag=CCO46_05215;pseudo=true NZ_NPOH01000003.1 Protein Homology CDS 143101 144094 . - 0 ID=cds-CCO46_RS05220;Parent=gene-CCO46_RS05220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=CCO46_RS05220;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;pseudo=true;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 144100 144651 . - . ID=gene-CCO46_RS05225;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=CCO46_RS05225;old_locus_tag=CCO46_05220 NZ_NPOH01000003.1 Protein Homology CDS 144100 144651 . - 0 ID=cds-WP_000973709.1;Parent=gene-CCO46_RS05225;Dbxref=GenBank:WP_000973709.1;Name=WP_000973709.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=CCO46_RS05225;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_000973709.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 144652 145530 . - . ID=gene-CCO46_RS05230;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CCO46_RS05230;old_locus_tag=CCO46_05225 NZ_NPOH01000003.1 Protein Homology CDS 144652 145530 . - 0 ID=cds-WP_094964400.1;Parent=gene-CCO46_RS05230;Dbxref=GenBank:WP_094964400.1;Name=WP_094964400.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=CCO46_RS05230;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_094964400.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 145578 146477 . - . ID=gene-CCO46_RS05235;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=CCO46_RS05235;old_locus_tag=CCO46_05230 NZ_NPOH01000003.1 Protein Homology CDS 145578 146477 . - 0 ID=cds-WP_001023664.1;Parent=gene-CCO46_RS05235;Dbxref=GenBank:WP_001023664.1;Name=WP_001023664.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=CCO46_RS05235;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_001023664.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 146477 147562 . - . ID=gene-CCO46_RS05240;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=CCO46_RS05240;old_locus_tag=CCO46_05235 NZ_NPOH01000003.1 Protein Homology CDS 146477 147562 . - 0 ID=cds-WP_061372098.1;Parent=gene-CCO46_RS05240;Dbxref=GenBank:WP_061372098.1;Name=WP_061372098.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=CCO46_RS05240;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_061372098.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 147939 148832 . - . ID=gene-CCO46_RS05245;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=CCO46_RS05245;old_locus_tag=CCO46_05240 NZ_NPOH01000003.1 Protein Homology CDS 147939 148832 . - 0 ID=cds-WP_000981469.1;Parent=gene-CCO46_RS05245;Dbxref=GenBank:WP_000981469.1;Name=WP_000981469.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=CCO46_RS05245;product=GalU regulator GalF;protein_id=WP_000981469.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 149010 150413 . - . ID=gene-CCO46_RS05250;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=CCO46_RS05250;old_locus_tag=CCO46_05245 NZ_NPOH01000003.1 Protein Homology CDS 149010 150413 . - 0 ID=cds-WP_097363258.1;Parent=gene-CCO46_RS05250;Dbxref=GenBank:WP_097363258.1;Name=WP_097363258.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=CCO46_RS05250;product=colanic acid biosynthesis protein WcaM;protein_id=WP_097363258.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 150424 151644 . - . ID=gene-CCO46_RS05255;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=CCO46_RS05255;old_locus_tag=CCO46_05250 NZ_NPOH01000003.1 Protein Homology CDS 150424 151644 . - 0 ID=cds-WP_097363259.1;Parent=gene-CCO46_RS05255;Dbxref=GenBank:WP_097363259.1;Name=WP_097363259.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=CCO46_RS05255;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_097363259.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 151641 152921 . - . ID=gene-CCO46_RS05260;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=CCO46_RS05260;old_locus_tag=CCO46_05255 NZ_NPOH01000003.1 Protein Homology CDS 151641 152921 . - 0 ID=cds-WP_076726842.1;Parent=gene-CCO46_RS05260;Dbxref=GenBank:WP_076726842.1;Name=WP_076726842.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=CCO46_RS05260;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_076726842.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 152943 154421 . - . ID=gene-CCO46_RS05265;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=CCO46_RS05265;old_locus_tag=CCO46_05260 NZ_NPOH01000003.1 Protein Homology CDS 152943 154421 . - 0 ID=cds-WP_076726844.1;Parent=gene-CCO46_RS05265;Dbxref=GenBank:WP_076726844.1;Name=WP_076726844.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=CCO46_RS05265;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_076726844.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 154523 155917 . - . ID=gene-CCO46_RS05270;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=CCO46_RS05270;old_locus_tag=CCO46_05265 NZ_NPOH01000003.1 Protein Homology CDS 154523 155917 . - 0 ID=cds-WP_000183155.1;Parent=gene-CCO46_RS05270;Dbxref=GenBank:WP_000183155.1;Name=WP_000183155.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=CCO46_RS05270;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183155.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 155971 157341 . - . ID=gene-CCO46_RS05275;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=CCO46_RS05275;old_locus_tag=CCO46_05270 NZ_NPOH01000003.1 Protein Homology CDS 155971 157341 . - 0 ID=cds-WP_097363260.1;Parent=gene-CCO46_RS05275;Dbxref=GenBank:WP_097363260.1;Name=WP_097363260.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=CCO46_RS05275;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_097363260.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 157452 158894 . - . ID=gene-CCO46_RS05280;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=CCO46_RS05280;old_locus_tag=CCO46_05275 NZ_NPOH01000003.1 Protein Homology CDS 157452 158894 . - 0 ID=cds-WP_097363261.1;Parent=gene-CCO46_RS05280;Dbxref=GenBank:WP_097363261.1;Name=WP_097363261.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=CCO46_RS05280;product=mannose-1-phosphate guanyltransferase;protein_id=WP_097363261.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 158891 160114 . - . ID=gene-CCO46_RS05285;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=CCO46_RS05285;old_locus_tag=CCO46_05280 NZ_NPOH01000003.1 Protein Homology CDS 158891 160114 . - 0 ID=cds-WP_023201604.1;Parent=gene-CCO46_RS05285;Dbxref=GenBank:WP_023201604.1;Name=WP_023201604.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=CCO46_RS05285;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_023201604.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 160111 160584 . - . ID=gene-CCO46_RS05290;Name=CCO46_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05290;old_locus_tag=CCO46_05285 NZ_NPOH01000003.1 Protein Homology CDS 160111 160584 . - 0 ID=cds-WP_058331810.1;Parent=gene-CCO46_RS05290;Dbxref=GenBank:WP_058331810.1;Name=WP_058331810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=CCO46_RS05290;product=GDP-mannose mannosyl hydrolase;protein_id=WP_058331810.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 160587 161552 . - . ID=gene-CCO46_RS05295;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=CCO46_RS05295;old_locus_tag=CCO46_05290 NZ_NPOH01000003.1 Protein Homology CDS 160587 161552 . - 0 ID=cds-WP_001041701.1;Parent=gene-CCO46_RS05295;Dbxref=GenBank:WP_001041701.1;Name=WP_001041701.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=CCO46_RS05295;product=GDP-L-fucose synthase;protein_id=WP_001041701.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 161555 162676 . - . ID=gene-CCO46_RS05300;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=CCO46_RS05300;old_locus_tag=CCO46_05295 NZ_NPOH01000003.1 Protein Homology CDS 161555 162676 . - 0 ID=cds-WP_000048160.1;Parent=gene-CCO46_RS05300;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=CCO46_RS05300;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 162700 163254 . - . ID=gene-CCO46_RS05305;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=CCO46_RS05305;old_locus_tag=CCO46_05300 NZ_NPOH01000003.1 Protein Homology CDS 162700 163254 . - 0 ID=cds-WP_001153603.1;Parent=gene-CCO46_RS05305;Dbxref=GenBank:WP_001153603.1;Name=WP_001153603.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=CCO46_RS05305;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153603.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 163270 164016 . - . ID=gene-CCO46_RS05310;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=CCO46_RS05310;old_locus_tag=CCO46_05305 NZ_NPOH01000003.1 Protein Homology CDS 163270 164016 . - 0 ID=cds-WP_000480132.1;Parent=gene-CCO46_RS05310;Dbxref=GenBank:WP_000480132.1;Name=WP_000480132.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=CCO46_RS05310;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000480132.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 164029 165243 . - . ID=gene-CCO46_RS05315;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=CCO46_RS05315;old_locus_tag=CCO46_05310 NZ_NPOH01000003.1 Protein Homology CDS 164029 165243 . - 0 ID=cds-WP_000091392.1;Parent=gene-CCO46_RS05315;Dbxref=GenBank:WP_000091392.1;Name=WP_000091392.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=CCO46_RS05315;product=colanic acid polymerase WcaD;protein_id=WP_000091392.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 165218 166435 . - . ID=gene-CCO46_RS05320;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=CCO46_RS05320;old_locus_tag=CCO46_05315 NZ_NPOH01000003.1 Protein Homology CDS 165218 166435 . - 0 ID=cds-WP_058331811.1;Parent=gene-CCO46_RS05320;Dbxref=GenBank:WP_058331811.1;Name=WP_058331811.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=CCO46_RS05320;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_058331811.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 166432 166920 . - . ID=gene-CCO46_RS05325;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=CCO46_RS05325;old_locus_tag=CCO46_05320 NZ_NPOH01000003.1 Protein Homology CDS 166432 166920 . - 0 ID=cds-WP_000888724.1;Parent=gene-CCO46_RS05325;Dbxref=GenBank:WP_000888724.1;Name=WP_000888724.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=CCO46_RS05325;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888724.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 166923 167765 . - . ID=gene-CCO46_RS05330;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=CCO46_RS05330;old_locus_tag=CCO46_05325 NZ_NPOH01000003.1 Protein Homology CDS 166923 167765 . - 0 ID=cds-WP_000205695.1;Parent=gene-CCO46_RS05330;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=CCO46_RS05330;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 167852 170011 . - . ID=gene-CCO46_RS05335;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=CCO46_RS05335;old_locus_tag=CCO46_05330 NZ_NPOH01000003.1 Protein Homology CDS 167852 170011 . - 0 ID=cds-WP_058331812.1;Parent=gene-CCO46_RS05335;Dbxref=GenBank:WP_058331812.1;Name=WP_058331812.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=CCO46_RS05335;product=tyrosine-protein kinase Wzc;protein_id=WP_058331812.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 170008 170457 . - . ID=gene-CCO46_RS05340;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=CCO46_RS05340;old_locus_tag=CCO46_05335 NZ_NPOH01000003.1 Protein Homology CDS 170008 170457 . - 0 ID=cds-WP_000482224.1;Parent=gene-CCO46_RS05340;Dbxref=GenBank:WP_000482224.1;Name=WP_000482224.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=CCO46_RS05340;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482224.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 170463 171602 . - . ID=gene-CCO46_RS05345;Name=CCO46_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05345;old_locus_tag=CCO46_05340 NZ_NPOH01000003.1 Protein Homology CDS 170463 171602 . - 0 ID=cds-WP_000978076.1;Parent=gene-CCO46_RS05345;Dbxref=GenBank:WP_000978076.1;Name=WP_000978076.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=CCO46_RS05345;product=polysaccharide export protein;protein_id=WP_000978076.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 172277 173857 . + . ID=gene-CCO46_RS05355;Name=CCO46_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05355;old_locus_tag=CCO46_05350 NZ_NPOH01000003.1 Protein Homology CDS 172277 173857 . + 0 ID=cds-WP_000454714.1;Parent=gene-CCO46_RS05355;Dbxref=GenBank:WP_000454714.1;Name=WP_000454714.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=CCO46_RS05355;product=TerC family protein;protein_id=WP_000454714.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 173943 175799 . - . ID=gene-CCO46_RS05360;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=CCO46_RS05360;old_locus_tag=CCO46_05355 NZ_NPOH01000003.1 Protein Homology CDS 173943 175799 . - 0 ID=cds-WP_001252254.1;Parent=gene-CCO46_RS05360;Dbxref=GenBank:WP_001252254.1;Name=WP_001252254.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=CCO46_RS05360;product=outer membrane assembly protein AsmA;protein_id=WP_001252254.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 175838 176419 . - . ID=gene-CCO46_RS05365;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CCO46_RS05365;old_locus_tag=CCO46_05360 NZ_NPOH01000003.1 Protein Homology CDS 175838 176419 . - 0 ID=cds-WP_001234783.1;Parent=gene-CCO46_RS05365;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=CCO46_RS05365;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 176510 177151 . - . ID=gene-CCO46_RS05370;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CCO46_RS05370;old_locus_tag=CCO46_05365 NZ_NPOH01000003.1 Protein Homology CDS 176510 177151 . - 0 ID=cds-WP_000132082.1;Parent=gene-CCO46_RS05370;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=CCO46_RS05370;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 177482 180472 . + . ID=gene-CCO46_RS05375;Name=CCO46_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05375;old_locus_tag=CCO46_05370 NZ_NPOH01000003.1 Protein Homology CDS 177482 180472 . + 0 ID=cds-WP_097363262.1;Parent=gene-CCO46_RS05375;Dbxref=GenBank:WP_097363262.1;Name=WP_097363262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=CCO46_RS05375;product=MASE1 domain-containing protein;protein_id=WP_097363262.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 180440 181309 . - . ID=gene-CCO46_RS05380;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=CCO46_RS05380;old_locus_tag=CCO46_05375 NZ_NPOH01000003.1 Protein Homology CDS 180440 181309 . - 0 ID=cds-WP_000494704.1;Parent=gene-CCO46_RS05380;Dbxref=GenBank:WP_000494704.1;Name=WP_000494704.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=CCO46_RS05380;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000494704.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 181443 182795 . + . ID=gene-CCO46_RS05390;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=CCO46_RS05390;old_locus_tag=CCO46_05385 NZ_NPOH01000003.1 Protein Homology CDS 181443 182795 . + 0 ID=cds-WP_000469628.1;Parent=gene-CCO46_RS05390;Dbxref=GenBank:WP_000469628.1;Name=WP_000469628.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=CCO46_RS05390;product=molecular chaperone;protein_id=WP_000469628.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 182894 182953 . - . ID=gene-CCO46_RS24880;Name=CCO46_RS24880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24880 NZ_NPOH01000003.1 Protein Homology CDS 182894 182953 . - 0 ID=cds-WP_105887528.1;Parent=gene-CCO46_RS24880;Dbxref=GenBank:WP_105887528.1;Name=WP_105887528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=CCO46_RS24880;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_105887528.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 183236 184477 . + . ID=gene-CCO46_RS05395;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=CCO46_RS05395;old_locus_tag=CCO46_05390 NZ_NPOH01000003.1 Protein Homology CDS 183236 184477 . + 0 ID=cds-WP_000678813.1;Parent=gene-CCO46_RS05395;Dbxref=GenBank:WP_000678813.1;Name=WP_000678813.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=CCO46_RS05395;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678813.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 184477 187599 . + . ID=gene-CCO46_RS05400;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=CCO46_RS05400;old_locus_tag=CCO46_05395 NZ_NPOH01000003.1 Protein Homology CDS 184477 187599 . + 0 ID=cds-WP_058331816.1;Parent=gene-CCO46_RS05400;Dbxref=GenBank:WP_058331816.1;Name=WP_058331816.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=CCO46_RS05400;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_058331816.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 187600 190680 . + . ID=gene-CCO46_RS05405;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=CCO46_RS05405;old_locus_tag=CCO46_05400 NZ_NPOH01000003.1 Protein Homology CDS 187600 190680 . + 0 ID=cds-WP_097363263.1;Parent=gene-CCO46_RS05405;Dbxref=GenBank:WP_097363263.1;Name=WP_097363263.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=CCO46_RS05405;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_097363263.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 190677 192089 . + . ID=gene-CCO46_RS05410;Name=CCO46_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05410;old_locus_tag=CCO46_05405 NZ_NPOH01000003.1 Protein Homology CDS 190677 192089 . + 0 ID=cds-WP_000137818.1;Parent=gene-CCO46_RS05410;Dbxref=GenBank:WP_000137818.1;Name=WP_000137818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=CCO46_RS05410;product=MFS transporter;protein_id=WP_000137818.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 192089 193492 . + . ID=gene-CCO46_RS05415;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=CCO46_RS05415;old_locus_tag=CCO46_05410 NZ_NPOH01000003.1 Protein Homology CDS 192089 193492 . + 0 ID=cds-WP_000870073.1;Parent=gene-CCO46_RS05415;Dbxref=GenBank:WP_000870073.1;Name=WP_000870073.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=CCO46_RS05415;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000870073.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 193489 194211 . + . ID=gene-CCO46_RS05420;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=CCO46_RS05420;old_locus_tag=CCO46_05415 NZ_NPOH01000003.1 Protein Homology CDS 193489 194211 . + 0 ID=cds-WP_000137854.1;Parent=gene-CCO46_RS05420;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=CCO46_RS05420;product=two-component system response regulator BaeR;protein_id=WP_000137854.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 194480 195682 . + . ID=gene-CCO46_RS05430;Name=CCO46_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05430;old_locus_tag=CCO46_05425 NZ_NPOH01000003.1 Protein Homology CDS 194480 195682 . + 0 ID=cds-WP_000141078.1;Parent=gene-CCO46_RS05430;Dbxref=GenBank:WP_000141078.1;Name=WP_000141078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=CCO46_RS05430;product=hypothetical protein;protein_id=WP_000141078.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 195682 196398 . + . ID=gene-CCO46_RS05435;Name=CCO46_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05435;old_locus_tag=CCO46_05430 NZ_NPOH01000003.1 Protein Homology CDS 195682 196398 . + 0 ID=cds-WP_058331818.1;Parent=gene-CCO46_RS05435;Dbxref=GenBank:WP_058331818.1;Name=WP_058331818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=CCO46_RS05435;product=DUF1266 domain-containing protein;protein_id=WP_058331818.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 196409 198520 . + . ID=gene-CCO46_RS05440;Name=CCO46_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05440;old_locus_tag=CCO46_05435 NZ_NPOH01000003.1 Protein Homology CDS 196409 198520 . + 0 ID=cds-WP_058331819.1;Parent=gene-CCO46_RS05440;Dbxref=GenBank:WP_058331819.1;Name=WP_058331819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=CCO46_RS05440;product=DUF4034 domain-containing protein;protein_id=WP_058331819.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 198636 199997 . + . ID=gene-CCO46_RS05445;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=CCO46_RS05445;old_locus_tag=CCO46_05440 NZ_NPOH01000003.1 Protein Homology CDS 198636 199997 . + 0 ID=cds-WP_001517981.1;Parent=gene-CCO46_RS05445;Dbxref=GenBank:WP_001517981.1;Name=WP_001517981.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=CCO46_RS05445;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_001517981.1;transl_table=11 NZ_NPOH01000003.1 RefSeq pseudogene 200448 200627 . + . ID=gene-CCO46_RS05450;Name=CCO46_RS05450;end_range=200627,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS05450;old_locus_tag=CCO46_05445;partial=true;pseudo=true NZ_NPOH01000003.1 Protein Homology CDS 200448 200627 . + 0 ID=cds-CCO46_RS05450;Parent=gene-CCO46_RS05450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=200627,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=CCO46_RS05450;partial=true;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 200637 201053 . - . ID=gene-CCO46_RS05455;Name=CCO46_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05455;old_locus_tag=CCO46_05450 NZ_NPOH01000003.1 Protein Homology CDS 200637 201053 . - 0 ID=cds-WP_076728211.1;Parent=gene-CCO46_RS05455;Dbxref=GenBank:WP_076728211.1;Name=WP_076728211.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=CCO46_RS05455;product=CesT family type III secretion system chaperone;protein_id=WP_076728211.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 201382 201717 . - . ID=gene-CCO46_RS05465;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=CCO46_RS05465;old_locus_tag=CCO46_05460 NZ_NPOH01000003.1 Protein Homology CDS 201382 201717 . - 0 ID=cds-WP_058331821.1;Parent=gene-CCO46_RS05465;Dbxref=GenBank:WP_058331821.1;Name=WP_058331821.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=CCO46_RS05465;product=type III secretion system effector SteD;protein_id=WP_058331821.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 202429 203328 . + . ID=gene-CCO46_RS05475;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=CCO46_RS05475;old_locus_tag=CCO46_05470 NZ_NPOH01000003.1 Protein Homology CDS 202429 203328 . + 0 ID=cds-WP_001273395.1;Parent=gene-CCO46_RS05475;Dbxref=GenBank:WP_001273395.1;Name=WP_001273395.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=CCO46_RS05475;product=lipid kinase YegS;protein_id=WP_001273395.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 203381 204433 . - . ID=gene-CCO46_RS05480;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=CCO46_RS05480;old_locus_tag=CCO46_05475 NZ_NPOH01000003.1 Protein Homology CDS 203381 204433 . - 0 ID=cds-WP_000129590.1;Parent=gene-CCO46_RS05480;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=CCO46_RS05480;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 204686 205957 . + . ID=gene-CCO46_RS05485;Name=CCO46_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05485;old_locus_tag=CCO46_05480 NZ_NPOH01000003.1 Protein Homology CDS 204686 205957 . + 0 ID=cds-WP_094887650.1;Parent=gene-CCO46_RS05485;Dbxref=GenBank:WP_094887650.1;Name=WP_094887650.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=CCO46_RS05485;product=nucleoside permease;protein_id=WP_094887650.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 205954 206958 . + . ID=gene-CCO46_RS05490;Name=CCO46_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05490;old_locus_tag=CCO46_05485 NZ_NPOH01000003.1 Protein Homology CDS 205954 206958 . + 0 ID=cds-WP_000642799.1;Parent=gene-CCO46_RS05490;Dbxref=GenBank:WP_000642799.1;Name=WP_000642799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=CCO46_RS05490;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642799.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 206955 207920 . + . ID=gene-CCO46_RS05495;Name=CCO46_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05495;old_locus_tag=CCO46_05490 NZ_NPOH01000003.1 Protein Homology CDS 206955 207920 . + 0 ID=cds-WP_080197787.1;Parent=gene-CCO46_RS05495;Dbxref=GenBank:WP_080197787.1;Name=WP_080197787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=CCO46_RS05495;product=PfkB family carbohydrate kinase;protein_id=WP_080197787.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 207894 208640 . - . ID=gene-CCO46_RS05500;Name=CCO46_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05500;old_locus_tag=CCO46_05495 NZ_NPOH01000003.1 Protein Homology CDS 207894 208640 . - 0 ID=cds-WP_000434062.1;Parent=gene-CCO46_RS05500;Dbxref=GenBank:WP_000434062.1;Name=WP_000434062.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=CCO46_RS05500;product=GntR family transcriptional regulator;protein_id=WP_000434062.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 208676 209476 . - . ID=gene-CCO46_RS05505;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CCO46_RS05505;old_locus_tag=CCO46_05500 NZ_NPOH01000003.1 Protein Homology CDS 208676 209476 . - 0 ID=cds-WP_094887651.1;Parent=gene-CCO46_RS05505;Dbxref=GenBank:WP_094887651.1;Name=WP_094887651.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=CCO46_RS05505;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_094887651.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 209463 210260 . - . ID=gene-CCO46_RS05510;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CCO46_RS05510;old_locus_tag=CCO46_05505 NZ_NPOH01000003.1 Protein Homology CDS 209463 210260 . - 0 ID=cds-WP_094887652.1;Parent=gene-CCO46_RS05510;Dbxref=GenBank:WP_094887652.1;Name=WP_094887652.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=CCO46_RS05510;product=hydroxyethylthiazole kinase;protein_id=WP_094887652.1;transl_table=11 NZ_NPOH01000003.1 cmsearch riboswitch 210292 210388 . - . ID=id-NZ_NPOH01000003.1:210292..210388;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPOH01000003.1 RefSeq gene 210670 210984 . + . ID=gene-CCO46_RS05515;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=CCO46_RS05515;old_locus_tag=CCO46_05510 NZ_NPOH01000003.1 Protein Homology CDS 210670 210984 . + 0 ID=cds-WP_000837534.1;Parent=gene-CCO46_RS05515;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=CCO46_RS05515;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 211028 212050 . - . ID=gene-CCO46_RS05520;Name=CCO46_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05520;old_locus_tag=CCO46_05515 NZ_NPOH01000003.1 Protein Homology CDS 211028 212050 . - 0 ID=cds-WP_076935416.1;Parent=gene-CCO46_RS05520;Dbxref=GenBank:WP_076935416.1;Name=WP_076935416.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=CCO46_RS05520;product=fimbrial protein;protein_id=WP_076935416.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 212066 214552 . - . ID=gene-CCO46_RS05525;Name=CCO46_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05525;old_locus_tag=CCO46_05520 NZ_NPOH01000003.1 Protein Homology CDS 212066 214552 . - 0 ID=cds-WP_094887653.1;Parent=gene-CCO46_RS05525;Dbxref=GenBank:WP_094887653.1;Name=WP_094887653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=CCO46_RS05525;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_094887653.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 214581 215261 . - . ID=gene-CCO46_RS05530;Name=CCO46_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05530;old_locus_tag=CCO46_05525 NZ_NPOH01000003.1 Protein Homology CDS 214581 215261 . - 0 ID=cds-WP_000871808.1;Parent=gene-CCO46_RS05530;Dbxref=GenBank:WP_000871808.1;Name=WP_000871808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=CCO46_RS05530;product=fimbrial assembly chaperone;protein_id=WP_000871808.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 215323 215856 . - . ID=gene-CCO46_RS05535;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=CCO46_RS05535;old_locus_tag=CCO46_05530 NZ_NPOH01000003.1 Protein Homology CDS 215323 215856 . - 0 ID=cds-WP_076935418.1;Parent=gene-CCO46_RS05535;Dbxref=GenBank:WP_076935418.1;Name=WP_076935418.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=CCO46_RS05535;product=fimbrial protein YehD;protein_id=WP_076935418.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 216135 216416 . - . ID=gene-CCO46_RS05540;Name=CCO46_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05540;old_locus_tag=CCO46_05535 NZ_NPOH01000003.1 Protein Homology CDS 216135 216416 . - 0 ID=cds-WP_000760404.1;Parent=gene-CCO46_RS05540;Dbxref=GenBank:WP_000760404.1;Name=WP_000760404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=CCO46_RS05540;product=YehE family protein;protein_id=WP_000760404.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 216694 217803 . - . ID=gene-CCO46_RS05545;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=CCO46_RS05545;old_locus_tag=CCO46_05540 NZ_NPOH01000003.1 Protein Homology CDS 216694 217803 . - 0 ID=cds-WP_001005424.1;Parent=gene-CCO46_RS05545;Dbxref=GenBank:WP_001005424.1;Name=WP_001005424.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=CCO46_RS05545;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005424.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 217968 220001 . + . ID=gene-CCO46_RS05550;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CCO46_RS05550;old_locus_tag=CCO46_05545 NZ_NPOH01000003.1 Protein Homology CDS 217968 220001 . + 0 ID=cds-WP_000195334.1;Parent=gene-CCO46_RS05550;Dbxref=GenBank:WP_000195334.1;Name=WP_000195334.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=CCO46_RS05550;product=methionine--tRNA ligase;protein_id=WP_000195334.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 220242 220700 . + . ID=gene-CCO46_RS05555;Name=CCO46_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05555;old_locus_tag=CCO46_05550 NZ_NPOH01000003.1 Protein Homology CDS 220242 220700 . + 0 ID=cds-WP_000703137.1;Parent=gene-CCO46_RS05555;Dbxref=GenBank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=CCO46_RS05555;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 220872 221402 . + . ID=gene-CCO46_RS05560;Name=CCO46_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05560;old_locus_tag=CCO46_05555 NZ_NPOH01000003.1 Protein Homology CDS 220872 221402 . + 0 ID=cds-WP_001265351.1;Parent=gene-CCO46_RS05560;Dbxref=GenBank:WP_001265351.1;Name=WP_001265351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=CCO46_RS05560;product=YehR family lipoprotein;protein_id=WP_001265351.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 221459 221926 . - . ID=gene-CCO46_RS05565;Name=CCO46_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05565;old_locus_tag=CCO46_05560 NZ_NPOH01000003.1 Protein Homology CDS 221459 221926 . - 0 ID=cds-WP_000950422.1;Parent=gene-CCO46_RS05565;Dbxref=GenBank:WP_000950422.1;Name=WP_000950422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=CCO46_RS05565;product=DUF1456 family protein;protein_id=WP_000950422.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 221973 222692 . - . ID=gene-CCO46_RS05570;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=CCO46_RS05570;old_locus_tag=CCO46_05565 NZ_NPOH01000003.1 Protein Homology CDS 221973 222692 . - 0 ID=cds-WP_000598637.1;Parent=gene-CCO46_RS05570;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=CCO46_RS05570;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 222689 224374 . - . ID=gene-CCO46_RS05575;Name=CCO46_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05575;old_locus_tag=CCO46_05570 NZ_NPOH01000003.1 Protein Homology CDS 222689 224374 . - 0 ID=cds-WP_000272850.1;Parent=gene-CCO46_RS05575;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=CCO46_RS05575;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 224597 225328 . + . ID=gene-CCO46_RS05580;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=CCO46_RS05580;old_locus_tag=CCO46_05575 NZ_NPOH01000003.1 Protein Homology CDS 224597 225328 . + 0 ID=cds-WP_001240418.1;Parent=gene-CCO46_RS05580;Dbxref=GenBank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=CCO46_RS05580;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 225388 225495 . + . ID=gene-CCO46_RS05585;Name=CCO46_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05585;old_locus_tag=CCO46_05580 NZ_NPOH01000003.1 Protein Homology CDS 225388 225495 . + 0 ID=cds-WP_001261696.1;Parent=gene-CCO46_RS05585;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=CCO46_RS05585;product=protein YohO;protein_id=WP_001261696.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 225476 226207 . - . ID=gene-CCO46_RS05590;Name=CCO46_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05590;old_locus_tag=CCO46_05585 NZ_NPOH01000003.1 Protein Homology CDS 225476 226207 . - 0 ID=cds-WP_000824857.1;Parent=gene-CCO46_RS05590;Dbxref=GenBank:WP_000824857.1;Name=WP_000824857.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=CCO46_RS05590;product=ABC transporter permease;protein_id=WP_000824857.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 226191 227138 . - . ID=gene-CCO46_RS05595;Name=CCO46_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05595;old_locus_tag=CCO46_05590 NZ_NPOH01000003.1 Protein Homology CDS 226191 227138 . - 0 ID=cds-WP_000569166.1;Parent=gene-CCO46_RS05595;Dbxref=GenBank:WP_000569166.1;Name=WP_000569166.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=CCO46_RS05595;product=ABC transporter ATP-binding protein;protein_id=WP_000569166.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 227131 228300 . - . ID=gene-CCO46_RS05600;Name=CCO46_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05600;old_locus_tag=CCO46_05595 NZ_NPOH01000003.1 Protein Homology CDS 227131 228300 . - 0 ID=cds-WP_001278121.1;Parent=gene-CCO46_RS05600;Dbxref=GenBank:WP_001278121.1;Name=WP_001278121.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=CCO46_RS05600;product=ABC transporter permease;protein_id=WP_001278121.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 228304 229221 . - . ID=gene-CCO46_RS05605;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=CCO46_RS05605;old_locus_tag=CCO46_05600 NZ_NPOH01000003.1 Protein Homology CDS 228304 229221 . - 0 ID=cds-WP_057519772.1;Parent=gene-CCO46_RS05605;Dbxref=GenBank:WP_057519772.1;Name=WP_057519772.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=CCO46_RS05605;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_057519772.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 229402 231699 . - . ID=gene-CCO46_RS05610;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=CCO46_RS05610;old_locus_tag=CCO46_05605 NZ_NPOH01000003.1 Protein Homology CDS 229402 231699 . - 0 ID=cds-WP_000871555.1;Parent=gene-CCO46_RS05610;Dbxref=GenBank:WP_000871555.1;Name=WP_000871555.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=CCO46_RS05610;product=beta-glucosidase BglX;protein_id=WP_000871555.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 231966 233696 . + . ID=gene-CCO46_RS05615;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=CCO46_RS05615;old_locus_tag=CCO46_05610 NZ_NPOH01000003.1 Protein Homology CDS 231966 233696 . + 0 ID=cds-WP_000095234.1;Parent=gene-CCO46_RS05615;Dbxref=GenBank:WP_000095234.1;Name=WP_000095234.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=CCO46_RS05615;product=D-lactate dehydrogenase;protein_id=WP_000095234.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 233754 234701 . - . ID=gene-CCO46_RS05620;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=CCO46_RS05620;old_locus_tag=CCO46_05615 NZ_NPOH01000003.1 Protein Homology CDS 233754 234701 . - 0 ID=cds-WP_000911555.1;Parent=gene-CCO46_RS05620;Dbxref=GenBank:WP_000911555.1;Name=WP_000911555.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=CCO46_RS05620;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911555.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 234867 235454 . - . ID=gene-CCO46_RS05630;Name=CCO46_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05630;old_locus_tag=CCO46_05625 NZ_NPOH01000003.1 Protein Homology CDS 234867 235454 . - 0 ID=cds-WP_001017057.1;Parent=gene-CCO46_RS05630;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=CCO46_RS05630;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 235613 236182 . + . ID=gene-CCO46_RS05635;Name=CCO46_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05635;old_locus_tag=CCO46_05630 NZ_NPOH01000003.1 Protein Homology CDS 235613 236182 . + 0 ID=cds-WP_001523476.1;Parent=gene-CCO46_RS05635;Dbxref=GenBank:WP_001523476.1;Name=WP_001523476.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=CCO46_RS05635;product=DedA family protein;protein_id=WP_001523476.1;transl_table=11 NZ_NPOH01000003.1 RefSeq pseudogene 236231 236777 . - . ID=gene-CCO46_RS05640;Name=CCO46_RS05640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS05640;old_locus_tag=CCO46_05635;pseudo=true NZ_NPOH01000003.1 Protein Homology CDS 236231 236777 . - 0 ID=cds-CCO46_RS05640;Parent=gene-CCO46_RS05640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=CCO46_RS05640;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 236843 238279 . - . ID=gene-CCO46_RS05645;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=CCO46_RS05645;old_locus_tag=CCO46_05640 NZ_NPOH01000003.1 Protein Homology CDS 236843 238279 . - 0 ID=cds-WP_001081457.1;Parent=gene-CCO46_RS05645;Dbxref=GenBank:WP_001081457.1;Name=WP_001081457.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=CCO46_RS05645;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001081457.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 238597 238680 . + . ID=gene-CCO46_RS24885;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=CCO46_RS24885;old_locus_tag=CCO46_05645 NZ_NPOH01000003.1 Protein Homology CDS 238597 238680 . + 0 ID=cds-WP_000698460.1;Parent=gene-CCO46_RS24885;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=CCO46_RS24885;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 238738 239676 . - . ID=gene-CCO46_RS05655;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=CCO46_RS05655;old_locus_tag=CCO46_05650 NZ_NPOH01000003.1 Protein Homology CDS 238738 239676 . - 0 ID=cds-WP_001264839.1;Parent=gene-CCO46_RS05655;Dbxref=GenBank:WP_001264839.1;Name=WP_001264839.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=CCO46_RS05655;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264839.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 239785 240978 . - . ID=gene-CCO46_RS05660;Name=CCO46_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05660;old_locus_tag=CCO46_05655 NZ_NPOH01000003.1 Protein Homology CDS 239785 240978 . - 0 ID=cds-WP_000150103.1;Parent=gene-CCO46_RS05660;Dbxref=GenBank:WP_000150103.1;Name=WP_000150103.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=CCO46_RS05660;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150103.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 240993 241637 . - . ID=gene-CCO46_RS05665;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=CCO46_RS05665;old_locus_tag=CCO46_05660 NZ_NPOH01000003.1 Protein Homology CDS 240993 241637 . - 0 ID=cds-WP_000781195.1;Parent=gene-CCO46_RS05665;Dbxref=GenBank:WP_000781195.1;Name=WP_000781195.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=CCO46_RS05665;product=maleylacetoacetate isomerase;protein_id=WP_000781195.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 241646 242347 . - . ID=gene-CCO46_RS05670;Name=CCO46_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05670;old_locus_tag=CCO46_05665 NZ_NPOH01000003.1 Protein Homology CDS 241646 242347 . - 0 ID=cds-WP_000170621.1;Parent=gene-CCO46_RS05670;Dbxref=GenBank:WP_000170621.1;Name=WP_000170621.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=CCO46_RS05670;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170621.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 242363 243400 . - . ID=gene-CCO46_RS05675;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=CCO46_RS05675;old_locus_tag=CCO46_05670 NZ_NPOH01000003.1 Protein Homology CDS 242363 243400 . - 0 ID=cds-WP_001289857.1;Parent=gene-CCO46_RS05675;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=CCO46_RS05675;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 243412 244770 . - . ID=gene-CCO46_RS05680;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=CCO46_RS05680;old_locus_tag=CCO46_05675 NZ_NPOH01000003.1 Protein Homology CDS 243412 244770 . - 0 ID=cds-WP_000194218.1;Parent=gene-CCO46_RS05680;Dbxref=GenBank:WP_000194218.1;Name=WP_000194218.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=CCO46_RS05680;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_000194218.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 244896 245804 . + . ID=gene-CCO46_RS05685;Name=CCO46_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05685;old_locus_tag=CCO46_05680 NZ_NPOH01000003.1 Protein Homology CDS 244896 245804 . + 0 ID=cds-WP_000024658.1;Parent=gene-CCO46_RS05685;Dbxref=GenBank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=CCO46_RS05685;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024658.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 245936 246334 . + . ID=gene-CCO46_RS05690;Name=CCO46_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05690;old_locus_tag=CCO46_05685 NZ_NPOH01000003.1 Protein Homology CDS 245936 246334 . + 0 ID=cds-WP_000045719.1;Parent=gene-CCO46_RS05690;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=CCO46_RS05690;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 246331 247026 . + . ID=gene-CCO46_RS05695;Name=CCO46_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05695;old_locus_tag=CCO46_05690 NZ_NPOH01000003.1 Protein Homology CDS 246331 247026 . + 0 ID=cds-WP_058110907.1;Parent=gene-CCO46_RS05695;Dbxref=GenBank:WP_058110907.1;Name=WP_058110907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=CCO46_RS05695;product=CidB/LrgB family autolysis modulator;protein_id=WP_058110907.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 247180 248064 . + . ID=gene-CCO46_RS05700;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CCO46_RS05700;old_locus_tag=CCO46_05695 NZ_NPOH01000003.1 Protein Homology CDS 247180 248064 . + 0 ID=cds-WP_000553526.1;Parent=gene-CCO46_RS05700;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=CCO46_RS05700;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 248493 250535 . + . ID=gene-CCO46_RS05710;Name=CCO46_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05710;old_locus_tag=CCO46_05705 NZ_NPOH01000003.1 Protein Homology CDS 248493 250535 . + 0 ID=cds-WP_076726878.1;Parent=gene-CCO46_RS05710;Dbxref=GenBank:WP_076726878.1;Name=WP_076726878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954049.1;locus_tag=CCO46_RS05710;product=hypothetical protein;protein_id=WP_076726878.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 250722 251441 . + . ID=gene-CCO46_RS05715;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=CCO46_RS05715;old_locus_tag=CCO46_05710 NZ_NPOH01000003.1 Protein Homology CDS 250722 251441 . + 0 ID=cds-WP_000920081.1;Parent=gene-CCO46_RS05715;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=CCO46_RS05715;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 251438 251683 . + . ID=gene-CCO46_RS05720;Name=CCO46_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05720;old_locus_tag=CCO46_05715 NZ_NPOH01000003.1 Protein Homology CDS 251438 251683 . + 0 ID=cds-WP_000605187.1;Parent=gene-CCO46_RS05720;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=CCO46_RS05720;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 251888 253129 . + . ID=gene-CCO46_RS05725;Name=CCO46_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05725;old_locus_tag=CCO46_05720 NZ_NPOH01000003.1 Protein Homology CDS 251888 253129 . + 0 ID=cds-WP_001136408.1;Parent=gene-CCO46_RS05725;Dbxref=GenBank:WP_001136408.1;Name=WP_001136408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=CCO46_RS05725;product=NAD(P)-dependent oxidoreductase;protein_id=WP_001136408.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 253123 254358 . + . ID=gene-CCO46_RS05730;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=CCO46_RS05730;old_locus_tag=CCO46_05725 NZ_NPOH01000003.1 Protein Homology CDS 253123 254358 . + 0 ID=cds-WP_000956095.1;Parent=gene-CCO46_RS05730;Dbxref=GenBank:WP_000956095.1;Name=WP_000956095.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=CCO46_RS05730;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956095.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 254433 255443 . - . ID=gene-CCO46_RS05735;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=CCO46_RS05735;old_locus_tag=CCO46_05730 NZ_NPOH01000003.1 Protein Homology CDS 254433 255443 . - 0 ID=cds-WP_001275101.1;Parent=gene-CCO46_RS05735;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=CCO46_RS05735;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 255459 256979 . - . ID=gene-CCO46_RS05740;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=CCO46_RS05740;old_locus_tag=CCO46_05735 NZ_NPOH01000003.1 Protein Homology CDS 255459 256979 . - 0 ID=cds-WP_000535913.1;Parent=gene-CCO46_RS05740;Dbxref=GenBank:WP_000535913.1;Name=WP_000535913.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=CCO46_RS05740;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000535913.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 257113 258111 . - . ID=gene-CCO46_RS05745;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=CCO46_RS05745;old_locus_tag=CCO46_05740 NZ_NPOH01000003.1 Protein Homology CDS 257113 258111 . - 0 ID=cds-WP_001036942.1;Parent=gene-CCO46_RS05745;Dbxref=GenBank:WP_001036942.1;Name=WP_001036942.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=CCO46_RS05745;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036942.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 258610 259632 . - . ID=gene-CCO46_RS05750;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=CCO46_RS05750;old_locus_tag=CCO46_05745 NZ_NPOH01000003.1 Protein Homology CDS 258610 259632 . - 0 ID=cds-WP_000628634.1;Parent=gene-CCO46_RS05750;Dbxref=GenBank:WP_000628634.1;Name=WP_000628634.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=CCO46_RS05750;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628634.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 259782 260924 . - . ID=gene-CCO46_RS05755;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=CCO46_RS05755;old_locus_tag=CCO46_05750 NZ_NPOH01000003.1 Protein Homology CDS 259782 260924 . - 0 ID=cds-WP_001518079.1;Parent=gene-CCO46_RS05755;Dbxref=GenBank:WP_001518079.1;Name=WP_001518079.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=CCO46_RS05755;product=DUF418 domain-containing protein YeiB;protein_id=WP_001518079.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 260939 261607 . - . ID=gene-CCO46_RS05760;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=CCO46_RS05760;old_locus_tag=CCO46_05755 NZ_NPOH01000003.1 Protein Homology CDS 260939 261607 . - 0 ID=cds-WP_001139611.1;Parent=gene-CCO46_RS05760;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=CCO46_RS05760;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 261937 262794 . + . ID=gene-CCO46_RS05770;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=CCO46_RS05770;old_locus_tag=CCO46_05765 NZ_NPOH01000003.1 Protein Homology CDS 261937 262794 . + 0 ID=cds-WP_000425488.1;Parent=gene-CCO46_RS05770;Dbxref=GenBank:WP_000425488.1;Name=WP_000425488.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=CCO46_RS05770;product=S-formylglutathione hydrolase;protein_id=WP_000425488.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 262783 263172 . - . ID=gene-CCO46_RS05775;Name=CCO46_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05775;old_locus_tag=CCO46_05770 NZ_NPOH01000003.1 Protein Homology CDS 262783 263172 . - 0 ID=cds-WP_000876817.1;Parent=gene-CCO46_RS05775;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=CCO46_RS05775;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 263177 264544 . - . ID=gene-CCO46_RS05780;Name=CCO46_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05780;old_locus_tag=CCO46_05775 NZ_NPOH01000003.1 Protein Homology CDS 263177 264544 . - 0 ID=cds-WP_000443206.1;Parent=gene-CCO46_RS05780;Dbxref=GenBank:WP_000443206.1;Name=WP_000443206.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=CCO46_RS05780;product=L-serine ammonia-lyase;protein_id=WP_000443206.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 264761 265648 . + . ID=gene-CCO46_RS05785;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO46_RS05785;old_locus_tag=CCO46_05780 NZ_NPOH01000003.1 Protein Homology CDS 264761 265648 . + 0 ID=cds-WP_058331881.1;Parent=gene-CCO46_RS05785;Dbxref=GenBank:WP_058331881.1;Name=WP_058331881.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=CCO46_RS05785;product=phosphoserine phosphatase SerB;protein_id=WP_058331881.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 265681 267003 . + . ID=gene-CCO46_RS05790;Name=CCO46_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05790;old_locus_tag=CCO46_05785 NZ_NPOH01000003.1 Protein Homology CDS 265681 267003 . + 0 ID=cds-WP_097363264.1;Parent=gene-CCO46_RS05790;Dbxref=GenBank:WP_097363264.1;Name=WP_097363264.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=CCO46_RS05790;product=MFS transporter;protein_id=WP_097363264.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 267047 269038 . - . ID=gene-CCO46_RS05795;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=CCO46_RS05795;old_locus_tag=CCO46_05790 NZ_NPOH01000003.1 Protein Homology CDS 267047 269038 . - 0 ID=cds-WP_097363265.1;Parent=gene-CCO46_RS05795;Dbxref=GenBank:WP_097363265.1;Name=WP_097363265.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=CCO46_RS05795;product=catecholate siderophore receptor CirA;protein_id=WP_097363265.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 269385 270854 . - . ID=gene-CCO46_RS05805;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=CCO46_RS05805;old_locus_tag=CCO46_05800 NZ_NPOH01000003.1 Protein Homology CDS 269385 270854 . - 0 ID=cds-WP_000534999.1;Parent=gene-CCO46_RS05805;Dbxref=GenBank:WP_000534999.1;Name=WP_000534999.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=CCO46_RS05805;product=lysine-specific permease;protein_id=WP_000534999.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 271044 271907 . - . ID=gene-CCO46_RS05810;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=CCO46_RS05810;old_locus_tag=CCO46_05805 NZ_NPOH01000003.1 Protein Homology CDS 271044 271907 . - 0 ID=cds-WP_000548316.1;Parent=gene-CCO46_RS05810;Dbxref=GenBank:WP_000548316.1;Name=WP_000548316.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=CCO46_RS05810;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548316.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 272028 273077 . + . ID=gene-CCO46_RS05815;Name=CCO46_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05815;old_locus_tag=CCO46_05810 NZ_NPOH01000003.1 Protein Homology CDS 272028 273077 . + 0 ID=cds-WP_000137966.1;Parent=gene-CCO46_RS05815;Dbxref=GenBank:WP_000137966.1;Name=WP_000137966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=CCO46_RS05815;product=YeiH family protein;protein_id=WP_000137966.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 273156 274013 . + . ID=gene-CCO46_RS05820;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=CCO46_RS05820;old_locus_tag=CCO46_05815 NZ_NPOH01000003.1 Protein Homology CDS 273156 274013 . + 0 ID=cds-WP_000873906.1;Parent=gene-CCO46_RS05820;Dbxref=GenBank:WP_000873906.1;Name=WP_000873906.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=CCO46_RS05820;product=deoxyribonuclease IV;protein_id=WP_000873906.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 274078 275766 . - . ID=gene-CCO46_RS05825;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=CCO46_RS05825;old_locus_tag=CCO46_05820 NZ_NPOH01000003.1 Protein Homology CDS 274078 275766 . - 0 ID=cds-WP_097363266.1;Parent=gene-CCO46_RS05825;Dbxref=GenBank:WP_097363266.1;Name=WP_097363266.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=CCO46_RS05825;product=PTS fructose transporter subunit IIBC;protein_id=WP_097363266.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 275783 276721 . - . ID=gene-CCO46_RS05830;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=CCO46_RS05830;old_locus_tag=CCO46_05825 NZ_NPOH01000003.1 Protein Homology CDS 275783 276721 . - 0 ID=cds-WP_000091249.1;Parent=gene-CCO46_RS05830;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=CCO46_RS05830;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 276721 277851 . - . ID=gene-CCO46_RS05835;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=CCO46_RS05835;old_locus_tag=CCO46_05830 NZ_NPOH01000003.1 Protein Homology CDS 276721 277851 . - 0 ID=cds-WP_000487287.1;Parent=gene-CCO46_RS05835;Dbxref=GenBank:WP_000487287.1;Name=WP_000487287.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=CCO46_RS05835;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487287.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 278220 279401 . + . ID=gene-CCO46_RS05840;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=CCO46_RS05840;old_locus_tag=CCO46_05835 NZ_NPOH01000003.1 Protein Homology CDS 278220 279401 . + 0 ID=cds-WP_000551934.1;Parent=gene-CCO46_RS05840;Dbxref=GenBank:WP_000551934.1;Name=WP_000551934.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=CCO46_RS05840;product=sugar efflux transporter SetB;protein_id=WP_000551934.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 279466 280131 . - . ID=gene-CCO46_RS05845;Name=CCO46_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05845;old_locus_tag=CCO46_05840 NZ_NPOH01000003.1 Protein Homology CDS 279466 280131 . - 0 ID=cds-WP_001213883.1;Parent=gene-CCO46_RS05845;Dbxref=GenBank:WP_001213883.1;Name=WP_001213883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=CCO46_RS05845;product=GNVR domain-containing protein;protein_id=WP_001213883.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 280133 280255 . - . ID=gene-CCO46_RS05850;Name=CCO46_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05850;old_locus_tag=CCO46_05845 NZ_NPOH01000003.1 Protein Homology CDS 280133 280255 . - 0 ID=cds-WP_001519564.1;Parent=gene-CCO46_RS05850;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=CCO46_RS05850;product=membrane protein;protein_id=WP_001519564.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 280643 280897 . - . ID=gene-CCO46_RS05855;Name=CCO46_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05855;old_locus_tag=CCO46_05850 NZ_NPOH01000003.1 Protein Homology CDS 280643 280897 . - 0 ID=cds-WP_010989043.1;Parent=gene-CCO46_RS05855;Dbxref=GenBank:WP_010989043.1;Name=WP_010989043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=CCO46_RS05855;product=YkgJ family cysteine cluster protein;protein_id=WP_010989043.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 281221 281793 . + . ID=gene-CCO46_RS05860;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=CCO46_RS05860;old_locus_tag=CCO46_05855 NZ_NPOH01000003.1 Protein Homology CDS 281221 281793 . + 0 ID=cds-WP_001136822.1;Parent=gene-CCO46_RS05860;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=CCO46_RS05860;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 282005 282991 . + . ID=gene-CCO46_RS05865;Name=CCO46_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05865;old_locus_tag=CCO46_05860 NZ_NPOH01000003.1 Protein Homology CDS 282005 282991 . + 0 ID=cds-WP_000169350.1;Parent=gene-CCO46_RS05865;Dbxref=GenBank:WP_000169350.1;Name=WP_000169350.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=CCO46_RS05865;product=CobW family GTP-binding protein;protein_id=WP_000169350.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 283021 283740 . + . ID=gene-CCO46_RS05870;Name=CCO46_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05870;old_locus_tag=CCO46_05865 NZ_NPOH01000003.1 Protein Homology CDS 283021 283740 . + 0 ID=cds-WP_000178095.1;Parent=gene-CCO46_RS05870;Dbxref=GenBank:WP_000178095.1;Name=WP_000178095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=CCO46_RS05870;product=phosphatase PAP2 family protein;protein_id=WP_000178095.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 284154 284726 . + . ID=gene-CCO46_RS05880;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=CCO46_RS05880;old_locus_tag=CCO46_05875 NZ_NPOH01000003.1 Protein Homology CDS 284154 284726 . + 0 ID=cds-WP_000241015.1;Parent=gene-CCO46_RS05880;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=CCO46_RS05880;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 285052 286608 . + . ID=gene-CCO46_RS05885;Name=CCO46_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05885;old_locus_tag=CCO46_05885 NZ_NPOH01000003.1 Protein Homology CDS 285052 286608 . + 0 ID=cds-WP_058331878.1;Parent=gene-CCO46_RS05885;Dbxref=GenBank:WP_058331878.1;Name=WP_058331878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=CCO46_RS05885;product=cyclic di-GMP phosphodiesterase;protein_id=WP_058331878.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 286715 288520 . + . ID=gene-CCO46_RS05890;Name=CCO46_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05890;old_locus_tag=CCO46_05890 NZ_NPOH01000003.1 Protein Homology CDS 286715 288520 . + 0 ID=cds-WP_000561742.1;Parent=gene-CCO46_RS05890;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=CCO46_RS05890;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 288530 289624 . + . ID=gene-CCO46_RS05895;Name=CCO46_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05895;old_locus_tag=CCO46_05895 NZ_NPOH01000003.1 Protein Homology CDS 288530 289624 . + 0 ID=cds-WP_000501623.1;Parent=gene-CCO46_RS05895;Dbxref=GenBank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=CCO46_RS05895;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 289624 290649 . + . ID=gene-CCO46_RS05900;Name=CCO46_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05900;old_locus_tag=CCO46_05900 NZ_NPOH01000003.1 Protein Homology CDS 289624 290649 . + 0 ID=cds-WP_097363267.1;Parent=gene-CCO46_RS05900;Dbxref=GenBank:WP_097363267.1;Name=WP_097363267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=CCO46_RS05900;product=ABC transporter permease;protein_id=WP_097363267.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 290651 292240 . + . ID=gene-CCO46_RS05905;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=CCO46_RS05905;old_locus_tag=CCO46_05905 NZ_NPOH01000003.1 Protein Homology CDS 290651 292240 . + 0 ID=cds-WP_000203619.1;Parent=gene-CCO46_RS05905;Dbxref=GenBank:WP_000203619.1;Name=WP_000203619.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=CCO46_RS05905;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000203619.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 292244 292588 . - . ID=gene-CCO46_RS05910;Name=CCO46_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05910;old_locus_tag=CCO46_05910 NZ_NPOH01000003.1 Protein Homology CDS 292244 292588 . - 0 ID=cds-WP_001094639.1;Parent=gene-CCO46_RS05910;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=CCO46_RS05910;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 292979 294169 . - . ID=gene-CCO46_RS05920;Name=CCO46_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05920;old_locus_tag=CCO46_05920 NZ_NPOH01000003.1 Protein Homology CDS 292979 294169 . - 0 ID=cds-WP_000213349.1;Parent=gene-CCO46_RS05920;Dbxref=GenBank:WP_000213349.1;Name=WP_000213349.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=CCO46_RS05920;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213349.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 294197 294892 . - . ID=gene-CCO46_RS05925;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=CCO46_RS05925;old_locus_tag=CCO46_05925 NZ_NPOH01000003.1 Protein Homology CDS 294197 294892 . - 0 ID=cds-WP_001234836.1;Parent=gene-CCO46_RS05925;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=CCO46_RS05925;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 295044 296804 . + . ID=gene-CCO46_RS05930;Name=CCO46_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05930;old_locus_tag=CCO46_05930 NZ_NPOH01000003.1 Protein Homology CDS 295044 296804 . + 0 ID=cds-WP_000578121.1;Parent=gene-CCO46_RS05930;Dbxref=GenBank:WP_000578121.1;Name=WP_000578121.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=CCO46_RS05930;product=DEAD/DEAH box helicase;protein_id=WP_000578121.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 296929 297213 . + . ID=gene-CCO46_RS05935;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=CCO46_RS05935;old_locus_tag=CCO46_05935 NZ_NPOH01000003.1 Protein Homology CDS 296929 297213 . + 0 ID=cds-WP_000494192.1;Parent=gene-CCO46_RS05935;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=CCO46_RS05935;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 297322 297942 . - . ID=gene-CCO46_RS05940;Name=CCO46_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05940;old_locus_tag=CCO46_05940 NZ_NPOH01000003.1 Protein Homology CDS 297322 297942 . - 0 ID=cds-WP_000033429.1;Parent=gene-CCO46_RS05940;Dbxref=GenBank:WP_000033429.1;Name=WP_000033429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=CCO46_RS05940;product=hypothetical protein;protein_id=WP_000033429.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 297970 298977 . - . ID=gene-CCO46_RS05945;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=CCO46_RS05945;old_locus_tag=CCO46_05945 NZ_NPOH01000003.1 Protein Homology CDS 297970 298977 . - 0 ID=cds-WP_000050806.1;Parent=gene-CCO46_RS05945;Dbxref=GenBank:WP_000050806.1;Name=WP_000050806.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=CCO46_RS05945;product=nucleoid-associated protein YejK;protein_id=WP_000050806.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 299157 299384 . + . ID=gene-CCO46_RS05950;Name=CCO46_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05950;old_locus_tag=CCO46_05950 NZ_NPOH01000003.1 Protein Homology CDS 299157 299384 . + 0 ID=cds-WP_001135904.1;Parent=gene-CCO46_RS05950;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=CCO46_RS05950;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 299416 301176 . + . ID=gene-CCO46_RS05955;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=CCO46_RS05955;old_locus_tag=CCO46_05955 NZ_NPOH01000003.1 Protein Homology CDS 299416 301176 . + 0 ID=cds-WP_094887835.1;Parent=gene-CCO46_RS05955;Dbxref=GenBank:WP_094887835.1;Name=WP_094887835.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=CCO46_RS05955;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_094887835.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 301250 301326 . + . ID=gene-CCO46_RS05960;Name=CCO46_RS05960;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS05960;old_locus_tag=CCO46_05960 NZ_NPOH01000003.1 tRNAscan-SE tRNA 301250 301326 . + . ID=rna-CCO46_RS05960;Parent=gene-CCO46_RS05960;anticodon=(pos:301284..301286);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS05960;product=tRNA-Pro NZ_NPOH01000003.1 tRNAscan-SE exon 301250 301326 . + . ID=exon-CCO46_RS05960-1;Parent=rna-CCO46_RS05960;anticodon=(pos:301284..301286);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS05960;product=tRNA-Pro NZ_NPOH01000003.1 RefSeq pseudogene 301282 301374 . + . ID=gene-CCO46_RS25405;Name=CCO46_RS25405;end_range=301374,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25405;old_locus_tag=CCO46_05965;partial=true;pseudo=true NZ_NPOH01000003.1 Protein Homology CDS 301282 301374 . + 0 ID=cds-CCO46_RS25405;Parent=gene-CCO46_RS25405;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=301374,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=CCO46_RS25405;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 301368 301556 . + . ID=gene-CCO46_RS05970;Name=CCO46_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05970;old_locus_tag=CCO46_05970 NZ_NPOH01000003.1 Protein Homology CDS 301368 301556 . + 0 ID=cds-WP_053445069.1;Parent=gene-CCO46_RS05970;Dbxref=GenBank:WP_053445069.1;Name=WP_053445069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=CCO46_RS05970;product=DinI-like family protein;protein_id=WP_053445069.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 301749 302312 . - . ID=gene-CCO46_RS05975;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=CCO46_RS05975;old_locus_tag=CCO46_05975 NZ_NPOH01000003.1 Protein Homology CDS 301749 302312 . - 0 ID=cds-WP_097363268.1;Parent=gene-CCO46_RS05975;Dbxref=GenBank:WP_097363268.1;Name=WP_097363268.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=CCO46_RS05975;product=lipid A 3-O-deacylase PagL;protein_id=WP_097363268.1;transl_table=11 NZ_NPOH01000003.1 RefSeq gene 303131 303778 . + . ID=gene-CCO46_RS05990;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=CCO46_RS05990;old_locus_tag=CCO46_05990 NZ_NPOH01000003.1 Protein Homology CDS 303131 303778 . + 0 ID=cds-WP_001115500.1;Parent=gene-CCO46_RS05990;Dbxref=GenBank:WP_001115500.1;Name=WP_001115500.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=CCO46_RS05990;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115500.1;transl_table=11 NZ_NPOH01000003.1 RefSeq pseudogene 303822 303905 . - . ID=gene-CCO46_RS25410;Name=CCO46_RS25410;end_range=303905,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25410;partial=true;pseudo=true NZ_NPOH01000003.1 Protein Homology CDS 303822 303905 . - 0 ID=cds-CCO46_RS25410;Parent=gene-CCO46_RS25410;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=303905,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=CCO46_RS25410;partial=true;product=heme lyase subunit;pseudo=true;transl_table=11 ##sequence-region NZ_NPOH01000030.1 1 30466 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000030.1 RefSeq region 1 30466 . + . ID=NZ_NPOH01000030.1:1..30466;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000030.1 RefSeq pseudogene 66 527 . - . ID=gene-CCO46_RS23450;Name=CCO46_RS23450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS23450;old_locus_tag=CCO46_23440;partial=true;pseudo=true;start_range=.,66 NZ_NPOH01000030.1 Protein Homology CDS 66 527 . - 0 ID=cds-CCO46_RS23450;Parent=gene-CCO46_RS23450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=CCO46_RS23450;partial=true;product=hypothetical protein;pseudo=true;start_range=.,66;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 855 2228 . - . ID=gene-CCO46_RS23455;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=CCO46_RS23455;old_locus_tag=CCO46_23445 NZ_NPOH01000030.1 Protein Homology CDS 855 2228 . - 0 ID=cds-WP_000349897.1;Parent=gene-CCO46_RS23455;Dbxref=GenBank:WP_000349897.1;Name=WP_000349897.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=CCO46_RS23455;product=siroheme synthase CysG;protein_id=WP_000349897.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 2240 3049 . - . ID=gene-CCO46_RS23460;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=CCO46_RS23460;old_locus_tag=CCO46_23450 NZ_NPOH01000030.1 Protein Homology CDS 2240 3049 . - 0 ID=cds-WP_000493576.1;Parent=gene-CCO46_RS23460;Dbxref=GenBank:WP_000493576.1;Name=WP_000493576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=CCO46_RS23460;product=nitrite transporter NirC;protein_id=WP_000493576.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 3231 3557 . - . ID=gene-CCO46_RS23465;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CCO46_RS23465;old_locus_tag=CCO46_23455 NZ_NPOH01000030.1 Protein Homology CDS 3231 3557 . - 0 ID=cds-WP_058331619.1;Parent=gene-CCO46_RS23465;Dbxref=GenBank:WP_058331619.1;Name=WP_058331619.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571429.1;locus_tag=CCO46_RS23465;product=nitrite reductase small subunit NirD;protein_id=WP_058331619.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 3554 6097 . - . ID=gene-CCO46_RS23470;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CCO46_RS23470;old_locus_tag=CCO46_23460 NZ_NPOH01000030.1 Protein Homology CDS 3554 6097 . - 0 ID=cds-WP_097363526.1;Parent=gene-CCO46_RS23470;Dbxref=GenBank:WP_097363526.1;Name=WP_097363526.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=CCO46_RS23470;product=NADPH-nitrite reductase large subunit;protein_id=WP_097363526.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 6415 7596 . - . ID=gene-CCO46_RS23475;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=CCO46_RS23475;old_locus_tag=CCO46_23465 NZ_NPOH01000030.1 Protein Homology CDS 6415 7596 . - 0 ID=cds-WP_000185267.1;Parent=gene-CCO46_RS23475;Dbxref=GenBank:WP_000185267.1;Name=WP_000185267.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=CCO46_RS23475;product=MFS transporter TsgA;protein_id=WP_000185267.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 7873 8445 . + . ID=gene-CCO46_RS23480;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=CCO46_RS23480;old_locus_tag=CCO46_23470 NZ_NPOH01000030.1 Protein Homology CDS 7873 8445 . + 0 ID=cds-WP_097363527.1;Parent=gene-CCO46_RS23480;Dbxref=GenBank:WP_097363527.1;Name=WP_097363527.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=CCO46_RS23480;product=peptidylprolyl isomerase A;protein_id=WP_097363527.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 8554 8721 . + . ID=gene-CCO46_RS23485;Name=CCO46_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23485;old_locus_tag=CCO46_23475 NZ_NPOH01000030.1 Protein Homology CDS 8554 8721 . + 0 ID=cds-WP_001519136.1;Parent=gene-CCO46_RS23485;Dbxref=GenBank:WP_001519136.1;Name=WP_001519136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=CCO46_RS23485;product=YhfG family protein;protein_id=WP_001519136.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 8711 9313 . + . ID=gene-CCO46_RS23490;Name=CCO46_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23490;old_locus_tag=CCO46_23480 NZ_NPOH01000030.1 Protein Homology CDS 8711 9313 . + 0 ID=cds-WP_001280665.1;Parent=gene-CCO46_RS23490;Dbxref=GenBank:WP_001280665.1;Name=WP_001280665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=CCO46_RS23490;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280665.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 9345 9908 . + . ID=gene-CCO46_RS23495;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=CCO46_RS23495;old_locus_tag=CCO46_23485 NZ_NPOH01000030.1 Protein Homology CDS 9345 9908 . + 0 ID=cds-WP_000601879.1;Parent=gene-CCO46_RS23495;Dbxref=GenBank:WP_000601879.1;Name=WP_000601879.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=CCO46_RS23495;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601879.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 9994 11211 . + . ID=gene-CCO46_RS23500;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=CCO46_RS23500;old_locus_tag=CCO46_23490 NZ_NPOH01000030.1 Protein Homology CDS 9994 11211 . + 0 ID=cds-WP_000190025.1;Parent=gene-CCO46_RS23500;Dbxref=GenBank:WP_000190025.1;Name=WP_000190025.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=CCO46_RS23500;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000190025.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 11254 13341 . - . ID=gene-CCO46_RS23505;Name=CCO46_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23505;old_locus_tag=CCO46_23495 NZ_NPOH01000030.1 Protein Homology CDS 11254 13341 . - 0 ID=cds-WP_000269312.1;Parent=gene-CCO46_RS23505;Dbxref=GenBank:WP_000269312.1;Name=WP_000269312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=CCO46_RS23505;product=YccS/YhfK family putative transporter;protein_id=WP_000269312.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 13390 14022 . - . ID=gene-CCO46_RS23510;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=CCO46_RS23510;old_locus_tag=CCO46_23500 NZ_NPOH01000030.1 Protein Homology CDS 13390 14022 . - 0 ID=cds-WP_000242758.1;Parent=gene-CCO46_RS23510;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=CCO46_RS23510;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 14330 14734 . + . ID=gene-CCO46_RS23515;Name=CCO46_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23515;old_locus_tag=CCO46_23505 NZ_NPOH01000030.1 Protein Homology CDS 14330 14734 . + 0 ID=cds-WP_001148919.1;Parent=gene-CCO46_RS23515;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=CCO46_RS23515;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 14830 15699 . - . ID=gene-CCO46_RS23520;Name=CCO46_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23520;old_locus_tag=CCO46_23510 NZ_NPOH01000030.1 Protein Homology CDS 14830 15699 . - 0 ID=cds-WP_001274690.1;Parent=gene-CCO46_RS23520;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=CCO46_RS23520;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 15751 15969 . - . ID=gene-CCO46_RS23525;Name=CCO46_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23525;old_locus_tag=CCO46_23515 NZ_NPOH01000030.1 Protein Homology CDS 15751 15969 . - 0 ID=cds-WP_000586568.1;Parent=gene-CCO46_RS23525;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=CCO46_RS23525;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 15966 17033 . - . ID=gene-CCO46_RS23530;Name=CCO46_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23530;old_locus_tag=CCO46_23520 NZ_NPOH01000030.1 Protein Homology CDS 15966 17033 . - 0 ID=cds-WP_001214115.1;Parent=gene-CCO46_RS23530;Dbxref=GenBank:WP_001214115.1;Name=WP_001214115.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=CCO46_RS23530;product=hydrolase;protein_id=WP_001214115.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 17231 17542 . + . ID=gene-CCO46_RS23535;Name=CCO46_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23535;old_locus_tag=CCO46_23530 NZ_NPOH01000030.1 Protein Homology CDS 17231 17542 . + 0 ID=cds-WP_000047690.1;Parent=gene-CCO46_RS23535;Dbxref=GenBank:WP_000047690.1;Name=WP_000047690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=CCO46_RS23535;product=monooxygenase;protein_id=WP_000047690.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 17544 17765 . - . ID=gene-CCO46_RS23540;Name=CCO46_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23540;old_locus_tag=CCO46_23535 NZ_NPOH01000030.1 Protein Homology CDS 17544 17765 . - 0 ID=cds-WP_080208138.1;Parent=gene-CCO46_RS23540;Dbxref=GenBank:WP_080208138.1;Name=WP_080208138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=CCO46_RS23540;product=LysR family transcriptional regulator;protein_id=WP_080208138.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 17928 19835 . - . ID=gene-CCO46_RS23545;Name=CCO46_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23545;old_locus_tag=CCO46_23540 NZ_NPOH01000030.1 Protein Homology CDS 17928 19835 . - 0 ID=cds-WP_079827256.1;Parent=gene-CCO46_RS23545;Dbxref=GenBank:WP_079827256.1;Name=WP_079827256.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=CCO46_RS23545;product=ABC transporter ATP-binding protein;protein_id=WP_079827256.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 20101 20652 . + . ID=gene-CCO46_RS23550;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=CCO46_RS23550;old_locus_tag=CCO46_23545 NZ_NPOH01000030.1 Protein Homology CDS 20101 20652 . + 0 ID=cds-WP_000081820.1;Parent=gene-CCO46_RS23550;Dbxref=GenBank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=CCO46_RS23550;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 20652 22457 . + . ID=gene-CCO46_RS23555;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=CCO46_RS23555;old_locus_tag=CCO46_23550 NZ_NPOH01000030.1 Protein Homology CDS 20652 22457 . + 0 ID=cds-WP_080210081.1;Parent=gene-CCO46_RS23555;Dbxref=GenBank:WP_080210081.1;Name=WP_080210081.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=CCO46_RS23555;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_080210081.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 22467 22667 . + . ID=gene-CCO46_RS23560;Name=CCO46_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23560;old_locus_tag=CCO46_23555 NZ_NPOH01000030.1 Protein Homology CDS 22467 22667 . + 0 ID=cds-WP_001007735.1;Parent=gene-CCO46_RS23560;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=CCO46_RS23560;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 22762 23352 . + . ID=gene-CCO46_RS23565;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=CCO46_RS23565;old_locus_tag=CCO46_23560 NZ_NPOH01000030.1 Protein Homology CDS 22762 23352 . + 0 ID=cds-WP_000861341.1;Parent=gene-CCO46_RS23565;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=CCO46_RS23565;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 23541 23759 . - . ID=gene-CCO46_RS23570;Name=CCO46_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23570;old_locus_tag=CCO46_23565 NZ_NPOH01000030.1 Protein Homology CDS 23541 23759 . - 0 ID=cds-WP_001152701.1;Parent=gene-CCO46_RS23570;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=CCO46_RS23570;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 23979 24797 . + . ID=gene-CCO46_RS23575;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=CCO46_RS23575;old_locus_tag=CCO46_23570 NZ_NPOH01000030.1 Protein Homology CDS 23979 24797 . + 0 ID=cds-WP_000838225.1;Parent=gene-CCO46_RS23575;Dbxref=GenBank:WP_000838225.1;Name=WP_000838225.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=CCO46_RS23575;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838225.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 25073 25795 . + . ID=gene-CCO46_RS23580;Name=CCO46_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23580;old_locus_tag=CCO46_23575 NZ_NPOH01000030.1 Protein Homology CDS 25073 25795 . + 0 ID=cds-WP_000091471.1;Parent=gene-CCO46_RS23580;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=CCO46_RS23580;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 25795 26181 . + . ID=gene-CCO46_RS23585;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=CCO46_RS23585;old_locus_tag=CCO46_23580 NZ_NPOH01000030.1 Protein Homology CDS 25795 26181 . + 0 ID=cds-WP_001268011.1;Parent=gene-CCO46_RS23585;Dbxref=GenBank:WP_001268011.1;Name=WP_001268011.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=CCO46_RS23585;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268011.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 26181 26537 . + . ID=gene-CCO46_RS23590;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=CCO46_RS23590;old_locus_tag=CCO46_23585 NZ_NPOH01000030.1 Protein Homology CDS 26181 26537 . + 0 ID=cds-WP_000820705.1;Parent=gene-CCO46_RS23590;Dbxref=GenBank:WP_000820705.1;Name=WP_000820705.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=CCO46_RS23590;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820705.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 26545 26832 . + . ID=gene-CCO46_RS23595;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=CCO46_RS23595;old_locus_tag=CCO46_23590 NZ_NPOH01000030.1 Protein Homology CDS 26545 26832 . + 0 ID=cds-WP_000903400.1;Parent=gene-CCO46_RS23595;Dbxref=GenBank:WP_000903400.1;Name=WP_000903400.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=CCO46_RS23595;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903400.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 26958 27332 . + . ID=gene-CCO46_RS23600;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CCO46_RS23600;old_locus_tag=CCO46_23595 NZ_NPOH01000030.1 Protein Homology CDS 26958 27332 . + 0 ID=cds-WP_000246815.1;Parent=gene-CCO46_RS23600;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=CCO46_RS23600;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 27428 27898 . + . ID=gene-CCO46_RS23605;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CCO46_RS23605;old_locus_tag=CCO46_23600 NZ_NPOH01000030.1 Protein Homology CDS 27428 27898 . + 0 ID=cds-WP_001138042.1;Parent=gene-CCO46_RS23605;Dbxref=GenBank:WP_001138042.1;Name=WP_001138042.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=CCO46_RS23605;product=30S ribosomal protein S7;protein_id=WP_001138042.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 27995 30109 . + . ID=gene-CCO46_RS23610;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CCO46_RS23610;old_locus_tag=CCO46_23605 NZ_NPOH01000030.1 Protein Homology CDS 27995 30109 . + 0 ID=cds-WP_000124693.1;Parent=gene-CCO46_RS23610;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=CCO46_RS23610;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11 NZ_NPOH01000030.1 RefSeq gene 30181 30466 . + . ID=gene-CCO46_RS23615;Name=CCO46_RS23615;end_range=30466,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23615;old_locus_tag=CCO46_23610;partial=true NZ_NPOH01000030.1 Protein Homology CDS 30181 30466 . + 0 ID=cds-WP_000031682.1;Parent=gene-CCO46_RS23615;Dbxref=GenBank:WP_000031682.1;Name=WP_000031682.1;Ontology_term=GO:0003924,GO:0005525;end_range=30466,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO46_RS23615;partial=true;product=GTP-binding protein;protein_id=WP_000031682.1;transl_table=11 ##sequence-region NZ_NPOH01000031.1 1 26407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000031.1 RefSeq region 1 26407 . + . ID=NZ_NPOH01000031.1:1..26407;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000031.1 RefSeq pseudogene 1 293 . + . ID=gene-CCO46_RS23620;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO46_RS23620;old_locus_tag=CCO46_23615;partial=true;pseudo=true;start_range=.,1 NZ_NPOH01000031.1 Protein Homology CDS 1 293 . + 2 ID=cds-CCO46_RS23620;Parent=gene-CCO46_RS23620;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO46_RS23620;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 478 672 . + . ID=gene-CCO46_RS23635;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=CCO46_RS23635;old_locus_tag=CCO46_23630 NZ_NPOH01000031.1 Protein Homology CDS 478 672 . + 0 ID=cds-WP_000289082.1;Parent=gene-CCO46_RS23635;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=CCO46_RS23635;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 745 1221 . + . ID=gene-CCO46_RS23640;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=CCO46_RS23640;old_locus_tag=CCO46_23635 NZ_NPOH01000031.1 Protein Homology CDS 745 1221 . + 0 ID=cds-WP_000675530.1;Parent=gene-CCO46_RS23640;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=CCO46_RS23640;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 1218 1685 . - . ID=gene-CCO46_RS23645;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=CCO46_RS23645;old_locus_tag=CCO46_23640 NZ_NPOH01000031.1 Protein Homology CDS 1218 1685 . - 0 ID=cds-WP_000495845.1;Parent=gene-CCO46_RS23645;Dbxref=GenBank:WP_000495845.1;Name=WP_000495845.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=CCO46_RS23645;product=prepilin peptidase;protein_id=WP_000495845.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 2065 2376 . + . ID=gene-CCO46_RS23655;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CCO46_RS23655;old_locus_tag=CCO46_23650 NZ_NPOH01000031.1 Protein Homology CDS 2065 2376 . + 0 ID=cds-WP_001181005.1;Parent=gene-CCO46_RS23655;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=CCO46_RS23655;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 2409 3038 . + . ID=gene-CCO46_RS23660;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CCO46_RS23660;old_locus_tag=CCO46_23655 NZ_NPOH01000031.1 Protein Homology CDS 2409 3038 . + 0 ID=cds-WP_000579838.1;Parent=gene-CCO46_RS23660;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=CCO46_RS23660;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 3049 3654 . + . ID=gene-CCO46_RS23665;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CCO46_RS23665;old_locus_tag=CCO46_23660 NZ_NPOH01000031.1 Protein Homology CDS 3049 3654 . + 0 ID=cds-WP_000424395.1;Parent=gene-CCO46_RS23665;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=CCO46_RS23665;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 3651 3953 . + . ID=gene-CCO46_RS23670;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CCO46_RS23670;old_locus_tag=CCO46_23665 NZ_NPOH01000031.1 Protein Homology CDS 3651 3953 . + 0 ID=cds-WP_000617546.1;Parent=gene-CCO46_RS23670;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=CCO46_RS23670;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 3971 4792 . + . ID=gene-CCO46_RS23675;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CCO46_RS23675;old_locus_tag=CCO46_23670 NZ_NPOH01000031.1 Protein Homology CDS 3971 4792 . + 0 ID=cds-WP_000301869.1;Parent=gene-CCO46_RS23675;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=CCO46_RS23675;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 4809 5087 . + . ID=gene-CCO46_RS23680;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CCO46_RS23680;old_locus_tag=CCO46_23675 NZ_NPOH01000031.1 Protein Homology CDS 4809 5087 . + 0 ID=cds-WP_001138115.1;Parent=gene-CCO46_RS23680;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=CCO46_RS23680;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 5102 5434 . + . ID=gene-CCO46_RS23685;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CCO46_RS23685;old_locus_tag=CCO46_23680 NZ_NPOH01000031.1 Protein Homology CDS 5102 5434 . + 0 ID=cds-WP_000447529.1;Parent=gene-CCO46_RS23685;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=CCO46_RS23685;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 5452 6153 . + . ID=gene-CCO46_RS23690;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CCO46_RS23690;old_locus_tag=CCO46_23685 NZ_NPOH01000031.1 Protein Homology CDS 5452 6153 . + 0 ID=cds-WP_000529945.1;Parent=gene-CCO46_RS23690;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=CCO46_RS23690;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 6166 6576 . + . ID=gene-CCO46_RS23695;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CCO46_RS23695;old_locus_tag=CCO46_23690 NZ_NPOH01000031.1 Protein Homology CDS 6166 6576 . + 0 ID=cds-WP_000941208.1;Parent=gene-CCO46_RS23695;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=CCO46_RS23695;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 6576 6767 . + . ID=gene-CCO46_RS23700;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CCO46_RS23700;old_locus_tag=CCO46_23695 NZ_NPOH01000031.1 Protein Homology CDS 6576 6767 . + 0 ID=cds-WP_000644742.1;Parent=gene-CCO46_RS23700;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=CCO46_RS23700;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 6767 7021 . + . ID=gene-CCO46_RS23705;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CCO46_RS23705;old_locus_tag=CCO46_23700 NZ_NPOH01000031.1 Protein Homology CDS 6767 7021 . + 0 ID=cds-WP_000130101.1;Parent=gene-CCO46_RS23705;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=CCO46_RS23705;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 7185 7556 . + . ID=gene-CCO46_RS23710;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CCO46_RS23710;old_locus_tag=CCO46_23705 NZ_NPOH01000031.1 Protein Homology CDS 7185 7556 . + 0 ID=cds-WP_000613954.1;Parent=gene-CCO46_RS23710;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=CCO46_RS23710;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 7567 7881 . + . ID=gene-CCO46_RS23715;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CCO46_RS23715;old_locus_tag=CCO46_23710 NZ_NPOH01000031.1 Protein Homology CDS 7567 7881 . + 0 ID=cds-WP_000729185.1;Parent=gene-CCO46_RS23715;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=CCO46_RS23715;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 7896 8435 . + . ID=gene-CCO46_RS23720;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CCO46_RS23720;old_locus_tag=CCO46_23715 NZ_NPOH01000031.1 Protein Homology CDS 7896 8435 . + 0 ID=cds-WP_001096206.1;Parent=gene-CCO46_RS23720;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=CCO46_RS23720;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 8450 8755 . + . ID=gene-CCO46_RS23725;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CCO46_RS23725;old_locus_tag=CCO46_23720 NZ_NPOH01000031.1 Protein Homology CDS 8450 8755 . + 0 ID=cds-WP_001118932.1;Parent=gene-CCO46_RS23725;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=CCO46_RS23725;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 8789 9181 . + . ID=gene-CCO46_RS23730;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CCO46_RS23730;old_locus_tag=CCO46_23725 NZ_NPOH01000031.1 Protein Homology CDS 8789 9181 . + 0 ID=cds-WP_000062611.1;Parent=gene-CCO46_RS23730;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=CCO46_RS23730;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 9194 9727 . + . ID=gene-CCO46_RS23735;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CCO46_RS23735;old_locus_tag=CCO46_23730 NZ_NPOH01000031.1 Protein Homology CDS 9194 9727 . + 0 ID=cds-WP_000091939.1;Parent=gene-CCO46_RS23735;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=CCO46_RS23735;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 9737 10090 . + . ID=gene-CCO46_RS23740;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CCO46_RS23740;old_locus_tag=CCO46_23735 NZ_NPOH01000031.1 Protein Homology CDS 9737 10090 . + 0 ID=cds-WP_000358956.1;Parent=gene-CCO46_RS23740;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=CCO46_RS23740;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 10105 10608 . + . ID=gene-CCO46_RS23745;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CCO46_RS23745;old_locus_tag=CCO46_23740 NZ_NPOH01000031.1 Protein Homology CDS 10105 10608 . + 0 ID=cds-WP_000940121.1;Parent=gene-CCO46_RS23745;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=CCO46_RS23745;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 10612 10791 . + . ID=gene-CCO46_RS23750;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CCO46_RS23750;old_locus_tag=CCO46_23745 NZ_NPOH01000031.1 Protein Homology CDS 10612 10791 . + 0 ID=cds-WP_001140434.1;Parent=gene-CCO46_RS23750;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=CCO46_RS23750;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 10795 11229 . + . ID=gene-CCO46_RS23755;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CCO46_RS23755;old_locus_tag=CCO46_23750 NZ_NPOH01000031.1 Protein Homology CDS 10795 11229 . + 0 ID=cds-WP_001238917.1;Parent=gene-CCO46_RS23755;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=CCO46_RS23755;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 11237 12568 . + . ID=gene-CCO46_RS23760;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CCO46_RS23760;old_locus_tag=CCO46_23755 NZ_NPOH01000031.1 Protein Homology CDS 11237 12568 . + 0 ID=cds-WP_001118864.1;Parent=gene-CCO46_RS23760;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=CCO46_RS23760;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 12600 12716 . + . ID=gene-CCO46_RS23765;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CCO46_RS23765;old_locus_tag=CCO46_23760 NZ_NPOH01000031.1 Protein Homology CDS 12600 12716 . + 0 ID=cds-WP_000868187.1;Parent=gene-CCO46_RS23765;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=CCO46_RS23765;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 12863 13219 . + . ID=gene-CCO46_RS23770;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CCO46_RS23770;old_locus_tag=CCO46_23765 NZ_NPOH01000031.1 Protein Homology CDS 12863 13219 . + 0 ID=cds-WP_000090780.1;Parent=gene-CCO46_RS23770;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=CCO46_RS23770;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 13236 13625 . + . ID=gene-CCO46_RS23775;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CCO46_RS23775;old_locus_tag=CCO46_23770 NZ_NPOH01000031.1 Protein Homology CDS 13236 13625 . + 0 ID=cds-WP_001029758.1;Parent=gene-CCO46_RS23775;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=CCO46_RS23775;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 13659 14279 . + . ID=gene-CCO46_RS23780;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CCO46_RS23780;old_locus_tag=CCO46_23775 NZ_NPOH01000031.1 Protein Homology CDS 13659 14279 . + 0 ID=cds-WP_000135226.1;Parent=gene-CCO46_RS23780;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=CCO46_RS23780;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 14305 15294 . + . ID=gene-CCO46_RS23785;Name=CCO46_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23785;old_locus_tag=CCO46_23780 NZ_NPOH01000031.1 Protein Homology CDS 14305 15294 . + 0 ID=cds-WP_001162094.1;Parent=gene-CCO46_RS23785;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=CCO46_RS23785;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 15335 15718 . + . ID=gene-CCO46_RS23790;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CCO46_RS23790;old_locus_tag=CCO46_23785 NZ_NPOH01000031.1 Protein Homology CDS 15335 15718 . + 0 ID=cds-WP_001216370.1;Parent=gene-CCO46_RS23790;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=CCO46_RS23790;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 15826 16194 . + . ID=gene-CCO46_RS23795;Name=CCO46_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23795;old_locus_tag=CCO46_23790 NZ_NPOH01000031.1 Protein Homology CDS 15826 16194 . + 0 ID=cds-WP_058331624.1;Parent=gene-CCO46_RS23795;Dbxref=GenBank:WP_058331624.1;Name=WP_058331624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=CCO46_RS23795;product=DUF1992 domain-containing protein;protein_id=WP_058331624.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 16205 16630 . + . ID=gene-CCO46_RS23800;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=CCO46_RS23800;old_locus_tag=CCO46_23795 NZ_NPOH01000031.1 Protein Homology CDS 16205 16630 . + 0 ID=cds-WP_000285588.1;Parent=gene-CCO46_RS23800;Dbxref=GenBank:WP_000285588.1;Name=WP_000285588.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=CCO46_RS23800;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285588.1;transl_table=11 NZ_NPOH01000031.1 RefSeq pseudogene 16688 16891 . + . ID=gene-CCO46_RS23805;Name=CCO46_RS23805;end_range=16891,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS23805;old_locus_tag=CCO46_23800;partial=true;pseudo=true NZ_NPOH01000031.1 Protein Homology CDS 16688 16891 . + 0 ID=cds-CCO46_RS23805;Parent=gene-CCO46_RS23805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16891,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=CCO46_RS23805;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 16893 17306 . - . ID=gene-CCO46_RS23810;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CCO46_RS23810;old_locus_tag=CCO46_23805 NZ_NPOH01000031.1 Protein Homology CDS 16893 17306 . - 0 ID=cds-WP_000008119.1;Parent=gene-CCO46_RS23810;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=CCO46_RS23810;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 17448 18824 . - . ID=gene-CCO46_RS23815;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=CCO46_RS23815;old_locus_tag=CCO46_23810 NZ_NPOH01000031.1 Protein Homology CDS 17448 18824 . - 0 ID=cds-WP_000691374.1;Parent=gene-CCO46_RS23815;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=CCO46_RS23815;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 18846 20135 . - . ID=gene-CCO46_RS23820;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CCO46_RS23820;old_locus_tag=CCO46_23815 NZ_NPOH01000031.1 Protein Homology CDS 18846 20135 . - 0 ID=cds-WP_058331626.1;Parent=gene-CCO46_RS23820;Dbxref=GenBank:WP_058331626.1;Name=WP_058331626.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=CCO46_RS23820;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_058331626.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 20187 21134 . - . ID=gene-CCO46_RS23825;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CCO46_RS23825;old_locus_tag=CCO46_23820 NZ_NPOH01000031.1 Protein Homology CDS 20187 21134 . - 0 ID=cds-WP_001285165.1;Parent=gene-CCO46_RS23825;Dbxref=GenBank:WP_001285165.1;Name=WP_001285165.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=CCO46_RS23825;product=methionyl-tRNA formyltransferase;protein_id=WP_001285165.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 21150 21659 . - . ID=gene-CCO46_RS23830;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CCO46_RS23830;old_locus_tag=CCO46_23825 NZ_NPOH01000031.1 Protein Homology CDS 21150 21659 . - 0 ID=cds-WP_000114987.1;Parent=gene-CCO46_RS23830;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=CCO46_RS23830;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 21791 22915 . + . ID=gene-CCO46_RS23835;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CCO46_RS23835;old_locus_tag=CCO46_23830 NZ_NPOH01000031.1 Protein Homology CDS 21791 22915 . + 0 ID=cds-WP_000124529.1;Parent=gene-CCO46_RS23835;Dbxref=GenBank:WP_000124529.1;Name=WP_000124529.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=CCO46_RS23835;product=DNA-protecting protein DprA;protein_id=WP_000124529.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 22887 23360 . + . ID=gene-CCO46_RS23840;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=CCO46_RS23840;old_locus_tag=CCO46_23835 NZ_NPOH01000031.1 Protein Homology CDS 22887 23360 . + 0 ID=cds-WP_000460663.1;Parent=gene-CCO46_RS23840;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=CCO46_RS23840;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 23387 23929 . + . ID=gene-CCO46_RS23845;Name=CCO46_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23845;old_locus_tag=CCO46_23840 NZ_NPOH01000031.1 Protein Homology CDS 23387 23929 . + 0 ID=cds-WP_023201535.1;Parent=gene-CCO46_RS23845;Dbxref=GenBank:WP_023201535.1;Name=WP_023201535.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=CCO46_RS23845;product=DNA topoisomerase family protein;protein_id=WP_023201535.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 23934 24506 . + . ID=gene-CCO46_RS23850;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=CCO46_RS23850;old_locus_tag=CCO46_23845 NZ_NPOH01000031.1 Protein Homology CDS 23934 24506 . + 0 ID=cds-WP_001063613.1;Parent=gene-CCO46_RS23850;Dbxref=GenBank:WP_001063613.1;Name=WP_001063613.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=CCO46_RS23850;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063613.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 24511 25329 . + . ID=gene-CCO46_RS23855;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CCO46_RS23855;old_locus_tag=CCO46_23850 NZ_NPOH01000031.1 Protein Homology CDS 24511 25329 . + 0 ID=cds-WP_000451194.1;Parent=gene-CCO46_RS23855;Dbxref=GenBank:WP_000451194.1;Name=WP_000451194.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=CCO46_RS23855;product=shikimate dehydrogenase;protein_id=WP_000451194.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 25326 25583 . + . ID=gene-CCO46_RS23860;Name=CCO46_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23860;old_locus_tag=CCO46_23855 NZ_NPOH01000031.1 Protein Homology CDS 25326 25583 . + 0 ID=cds-WP_001070571.1;Parent=gene-CCO46_RS23860;Dbxref=GenBank:WP_001070571.1;Name=WP_001070571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=CCO46_RS23860;product=DUF1488 domain-containing protein;protein_id=WP_001070571.1;transl_table=11 NZ_NPOH01000031.1 RefSeq gene 25559 26113 . - . ID=gene-CCO46_RS23865;Name=CCO46_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23865;old_locus_tag=CCO46_23860 NZ_NPOH01000031.1 Protein Homology CDS 25559 26113 . - 0 ID=cds-WP_001285631.1;Parent=gene-CCO46_RS23865;Dbxref=GenBank:WP_001285631.1;Name=WP_001285631.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=CCO46_RS23865;product=gamma carbonic anhydrase family protein;protein_id=WP_001285631.1;transl_table=11 ##sequence-region NZ_NPOH01000032.1 1 26010 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000032.1 RefSeq region 1 26010 . + . ID=NZ_NPOH01000032.1:1..26010;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000032.1 RefSeq pseudogene 210 384 . - . ID=gene-CCO46_RS25625;Name=CCO46_RS25625;end_range=384,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25625;partial=true;pseudo=true NZ_NPOH01000032.1 Protein Homology CDS 210 384 . - 0 ID=cds-CCO46_RS25625;Parent=gene-CCO46_RS25625;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=384,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898966.1;locus_tag=CCO46_RS25625;partial=true;product=integrase;pseudo=true;transl_table=11 NZ_NPOH01000032.1 RefSeq pseudogene 444 623 . - . ID=gene-CCO46_RS25630;Name=CCO46_RS25630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25630;old_locus_tag=CCO46_23870;partial=true;pseudo=true;start_range=.,444 NZ_NPOH01000032.1 Protein Homology CDS 444 623 . - 0 ID=cds-CCO46_RS25630;Parent=gene-CCO46_RS25630;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277619.1;locus_tag=CCO46_RS25630;partial=true;product=DUF1353 domain-containing protein;pseudo=true;start_range=.,444;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 936 1643 . + . ID=gene-CCO46_RS23885;Name=CCO46_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23885;old_locus_tag=CCO46_23875 NZ_NPOH01000032.1 Protein Homology CDS 936 1643 . + 0 ID=cds-WP_097363528.1;Parent=gene-CCO46_RS23885;Dbxref=GenBank:WP_097363528.1;Name=WP_097363528.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023884.6;locus_tag=CCO46_RS23885;product=leucine-rich repeat domain-containing protein;protein_id=WP_097363528.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 2076 2489 . + . ID=gene-CCO46_RS23890;Name=CCO46_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23890;old_locus_tag=CCO46_23880 NZ_NPOH01000032.1 Protein Homology CDS 2076 2489 . + 0 ID=cds-WP_058331234.1;Parent=gene-CCO46_RS23890;Dbxref=GenBank:WP_058331234.1;Name=WP_058331234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281950.1;locus_tag=CCO46_RS23890;product=subtilase cytotoxin subunit B;protein_id=WP_058331234.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 2506 3234 . + . ID=gene-CCO46_RS23895;Name=pltA;gbkey=Gene;gene=pltA;gene_biotype=protein_coding;locus_tag=CCO46_RS23895;old_locus_tag=CCO46_23885 NZ_NPOH01000032.1 Protein Homology CDS 2506 3234 . + 0 ID=cds-WP_058331233.1;Parent=gene-CCO46_RS23895;Dbxref=GenBank:WP_058331233.1;Name=WP_058331233.1;gbkey=CDS;gene=pltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766395.1;locus_tag=CCO46_RS23895;product=typhoid-like toxin S-CDT ADP-ribosylating subunit PltA;protein_id=WP_058331233.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 3426 3968 . + . ID=gene-CCO46_RS23900;Name=CCO46_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23900;old_locus_tag=CCO46_23890 NZ_NPOH01000032.1 Protein Homology CDS 3426 3968 . + 0 ID=cds-WP_000158843.1;Parent=gene-CCO46_RS23900;Dbxref=GenBank:WP_000158843.1;Name=WP_000158843.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016429.1;locus_tag=CCO46_RS23900;product=glycoside hydrolase family 108 protein;protein_id=WP_000158843.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 4117 4494 . - . ID=gene-CCO46_RS23905;Name=CCO46_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23905;old_locus_tag=CCO46_23895 NZ_NPOH01000032.1 Protein Homology CDS 4117 4494 . - 0 ID=cds-WP_001277616.1;Parent=gene-CCO46_RS23905;Dbxref=GenBank:WP_001277616.1;Name=WP_001277616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277616.1;locus_tag=CCO46_RS23905;product=DUF1353 domain-containing protein;protein_id=WP_001277616.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 4567 5385 . - . ID=gene-CCO46_RS23910;Name=cdtB;gbkey=Gene;gene=cdtB;gene_biotype=protein_coding;locus_tag=CCO46_RS23910;old_locus_tag=CCO46_23900 NZ_NPOH01000032.1 Protein Homology CDS 4567 5385 . - 0 ID=cds-WP_076728165.1;Parent=gene-CCO46_RS23910;Dbxref=GenBank:WP_076728165.1;Name=WP_076728165.1;gbkey=CDS;gene=cdtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233072.1;locus_tag=CCO46_RS23910;product=cytolethal distending toxin subunit B family protein;protein_id=WP_076728165.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 5883 6047 . + . ID=gene-CCO46_RS25275;Name=CCO46_RS25275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25275;old_locus_tag=CCO46_23905 NZ_NPOH01000032.1 GeneMarkS-2+ CDS 5883 6047 . + 0 ID=cds-WP_058331232.1;Parent=gene-CCO46_RS25275;Dbxref=GenBank:WP_058331232.1;Name=WP_058331232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25275;product=hypothetical protein;protein_id=WP_058331232.1;transl_table=11 NZ_NPOH01000032.1 RefSeq pseudogene 6022 6120 . + . ID=gene-CCO46_RS25940;Name=CCO46_RS25940;end_range=6120,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25940;partial=true;pseudo=true;start_range=.,6022 NZ_NPOH01000032.1 Protein Homology CDS 6022 6120 . + 0 ID=cds-CCO46_RS25940;Parent=gene-CCO46_RS25940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001034099.1;locus_tag=CCO46_RS25940;partial=true;product=hypothetical protein;pseudo=true;start_range=.,6022;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 6265 6504 . - . ID=gene-CCO46_RS23920;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=CCO46_RS23920;old_locus_tag=CCO46_23910 NZ_NPOH01000032.1 Protein Homology CDS 6265 6504 . - 0 ID=cds-WP_000497451.1;Parent=gene-CCO46_RS23920;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=CCO46_RS23920;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 6695 7216 . - . ID=gene-CCO46_RS23925;Name=CCO46_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23925;old_locus_tag=CCO46_23915 NZ_NPOH01000032.1 Protein Homology CDS 6695 7216 . - 0 ID=cds-WP_058331231.1;Parent=gene-CCO46_RS23925;Dbxref=GenBank:WP_058331231.1;Name=WP_058331231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=CCO46_RS23925;product=RICIN domain-containing protein;protein_id=WP_058331231.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 7631 7843 . - . ID=gene-CCO46_RS23930;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=CCO46_RS23930;old_locus_tag=CCO46_23920 NZ_NPOH01000032.1 Protein Homology CDS 7631 7843 . - 0 ID=cds-WP_001537306.1;Parent=gene-CCO46_RS23930;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=CCO46_RS23930;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 7975 8238 . - . ID=gene-CCO46_RS23935;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=CCO46_RS23935;old_locus_tag=CCO46_23925 NZ_NPOH01000032.1 Protein Homology CDS 7975 8238 . - 0 ID=cds-WP_097363529.1;Parent=gene-CCO46_RS23935;Dbxref=GenBank:WP_097363529.1;Name=WP_097363529.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=CCO46_RS23935;product=virulence protein PagD;protein_id=WP_097363529.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 9044 9601 . + . ID=gene-CCO46_RS23945;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=CCO46_RS23945;old_locus_tag=CCO46_23935 NZ_NPOH01000032.1 Protein Homology CDS 9044 9601 . + 0 ID=cds-WP_058331227.1;Parent=gene-CCO46_RS23945;Dbxref=GenBank:WP_058331227.1;Name=WP_058331227.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=CCO46_RS23945;product=virulence membrane protein PagC;protein_id=WP_058331227.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 10007 10083 . + . ID=gene-CCO46_RS23950;Name=CCO46_RS23950;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS23950;old_locus_tag=CCO46_23940 NZ_NPOH01000032.1 tRNAscan-SE tRNA 10007 10083 . + . ID=rna-CCO46_RS23950;Parent=gene-CCO46_RS23950;anticodon=(pos:10041..10043);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS23950;product=tRNA-Arg NZ_NPOH01000032.1 tRNAscan-SE exon 10007 10083 . + . ID=exon-CCO46_RS23950-1;Parent=rna-CCO46_RS23950;anticodon=(pos:10041..10043);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS23950;product=tRNA-Arg NZ_NPOH01000032.1 RefSeq gene 10839 11183 . - . ID=gene-CCO46_RS23955;Name=CCO46_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23955;old_locus_tag=CCO46_23945 NZ_NPOH01000032.1 Protein Homology CDS 10839 11183 . - 0 ID=cds-WP_097363530.1;Parent=gene-CCO46_RS23955;Dbxref=GenBank:WP_097363530.1;Name=WP_097363530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=CCO46_RS23955;product=c-type lysozyme inhibitor;protein_id=WP_097363530.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 11561 11686 . + . ID=gene-CCO46_RS25685;Name=CCO46_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25685;old_locus_tag=CCO46_23950 NZ_NPOH01000032.1 Protein Homology CDS 11561 11686 . + 0 ID=cds-WP_000758944.1;Parent=gene-CCO46_RS25685;Dbxref=GenBank:WP_000758944.1;Name=WP_000758944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000758943.1;locus_tag=CCO46_RS25685;product=hypothetical protein;protein_id=WP_000758944.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 11886 12116 . + . ID=gene-CCO46_RS23965;Name=CCO46_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23965;old_locus_tag=CCO46_23955 NZ_NPOH01000032.1 Protein Homology CDS 11886 12116 . + 0 ID=cds-WP_078057655.1;Parent=gene-CCO46_RS23965;Dbxref=GenBank:WP_078057655.1;Name=WP_078057655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=CCO46_RS23965;product=hypothetical protein;protein_id=WP_078057655.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 12311 12778 . + . ID=gene-CCO46_RS23970;Name=CCO46_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23970;old_locus_tag=CCO46_23960 NZ_NPOH01000032.1 Protein Homology CDS 12311 12778 . + 0 ID=cds-WP_001218118.1;Parent=gene-CCO46_RS23970;Dbxref=GenBank:WP_001218118.1;Name=WP_001218118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=CCO46_RS23970;product=Hsp20 family protein;protein_id=WP_001218118.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 13117 14160 . + . ID=gene-CCO46_RS23975;Name=CCO46_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23975;old_locus_tag=CCO46_23965 NZ_NPOH01000032.1 Protein Homology CDS 13117 14160 . + 0 ID=cds-WP_000780158.1;Parent=gene-CCO46_RS23975;Dbxref=GenBank:WP_000780158.1;Name=WP_000780158.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=CCO46_RS23975;product=sialidase family protein;protein_id=WP_000780158.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 14243 14773 . - . ID=gene-CCO46_RS23980;Name=CCO46_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23980;old_locus_tag=CCO46_23970 NZ_NPOH01000032.1 Protein Homology CDS 14243 14773 . - 0 ID=cds-WP_000929980.1;Parent=gene-CCO46_RS23980;Dbxref=GenBank:WP_000929980.1;Name=WP_000929980.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=CCO46_RS23980;product=cytochrome b;protein_id=WP_000929980.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 14922 15236 . - . ID=gene-CCO46_RS23985;Name=CCO46_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23985;old_locus_tag=CCO46_23975 NZ_NPOH01000032.1 Protein Homology CDS 14922 15236 . - 0 ID=cds-WP_000182479.1;Parent=gene-CCO46_RS23985;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=CCO46_RS23985;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 15918 17552 . + . ID=gene-CCO46_RS23990;Name=CCO46_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23990;old_locus_tag=CCO46_23980 NZ_NPOH01000032.1 Protein Homology CDS 15918 17552 . + 0 ID=cds-WP_001644622.1;Parent=gene-CCO46_RS23990;Dbxref=GenBank:WP_001644622.1;Name=WP_001644622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=CCO46_RS23990;product=ABC transporter substrate-binding protein;protein_id=WP_001644622.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 17552 18526 . + . ID=gene-CCO46_RS23995;Name=CCO46_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS23995;old_locus_tag=CCO46_23985 NZ_NPOH01000032.1 Protein Homology CDS 17552 18526 . + 0 ID=cds-WP_097363531.1;Parent=gene-CCO46_RS23995;Dbxref=GenBank:WP_097363531.1;Name=WP_097363531.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=CCO46_RS23995;product=ABC transporter permease;protein_id=WP_097363531.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 18516 19328 . + . ID=gene-CCO46_RS24000;Name=CCO46_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24000;old_locus_tag=CCO46_23990 NZ_NPOH01000032.1 Protein Homology CDS 18516 19328 . + 0 ID=cds-WP_094887582.1;Parent=gene-CCO46_RS24000;Dbxref=GenBank:WP_094887582.1;Name=WP_094887582.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=CCO46_RS24000;product=ABC transporter permease;protein_id=WP_094887582.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 19322 20119 . + . ID=gene-CCO46_RS24005;Name=CCO46_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24005;old_locus_tag=CCO46_23995 NZ_NPOH01000032.1 Protein Homology CDS 19322 20119 . + 0 ID=cds-WP_000950207.1;Parent=gene-CCO46_RS24005;Dbxref=GenBank:WP_000950207.1;Name=WP_000950207.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=CCO46_RS24005;product=ATP-binding cassette domain-containing protein;protein_id=WP_000950207.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 20113 20703 . + . ID=gene-CCO46_RS24010;Name=CCO46_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24010;old_locus_tag=CCO46_24000 NZ_NPOH01000032.1 Protein Homology CDS 20113 20703 . + 0 ID=cds-WP_000947459.1;Parent=gene-CCO46_RS24010;Dbxref=GenBank:WP_000947459.1;Name=WP_000947459.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=CCO46_RS24010;product=ATP-binding cassette domain-containing protein;protein_id=WP_000947459.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 20785 21918 . - . ID=gene-CCO46_RS24015;Name=CCO46_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24015;old_locus_tag=CCO46_24005 NZ_NPOH01000032.1 Protein Homology CDS 20785 21918 . - 0 ID=cds-WP_000456073.1;Parent=gene-CCO46_RS24015;Dbxref=GenBank:WP_000456073.1;Name=WP_000456073.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=CCO46_RS24015;product=mechanosensitive ion channel family protein;protein_id=WP_000456073.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 22112 22438 . + . ID=gene-CCO46_RS24020;Name=CCO46_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24020;old_locus_tag=CCO46_24010 NZ_NPOH01000032.1 Protein Homology CDS 22112 22438 . + 0 ID=cds-WP_001183699.1;Parent=gene-CCO46_RS24020;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=CCO46_RS24020;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 22447 22523 . + . ID=gene-CCO46_RS24025;Name=CCO46_RS24025;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24025;old_locus_tag=CCO46_24015 NZ_NPOH01000032.1 tRNAscan-SE tRNA 22447 22523 . + . ID=rna-CCO46_RS24025;Parent=gene-CCO46_RS24025;anticodon=(pos:22481..22483);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24025;product=tRNA-Arg NZ_NPOH01000032.1 tRNAscan-SE exon 22447 22523 . + . ID=exon-CCO46_RS24025-1;Parent=rna-CCO46_RS24025;anticodon=(pos:22481..22483);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24025;product=tRNA-Arg NZ_NPOH01000032.1 RefSeq gene 22635 23282 . + . ID=gene-CCO46_RS24030;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=CCO46_RS24030;old_locus_tag=CCO46_24020 NZ_NPOH01000032.1 Protein Homology CDS 22635 23282 . + 0 ID=cds-WP_170947423.1;Parent=gene-CCO46_RS24030;Dbxref=GenBank:WP_170947423.1;Name=WP_170947423.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=CCO46_RS24030;product=metal-binding protein ZinT;protein_id=WP_170947423.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 23391 24179 . + . ID=gene-CCO46_RS24035;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=CCO46_RS24035;old_locus_tag=CCO46_24025 NZ_NPOH01000032.1 Protein Homology CDS 23391 24179 . + 0 ID=cds-WP_094887581.1;Parent=gene-CCO46_RS24035;Dbxref=GenBank:WP_094887581.1;Name=WP_094887581.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=CCO46_RS24035;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_094887581.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 24324 24917 . + . ID=gene-CCO46_RS24040;Name=CCO46_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24040;old_locus_tag=CCO46_24030 NZ_NPOH01000032.1 Protein Homology CDS 24324 24917 . + 0 ID=cds-WP_001534706.1;Parent=gene-CCO46_RS24040;Dbxref=GenBank:WP_001534706.1;Name=WP_001534706.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=CCO46_RS24040;product=helix-turn-helix domain-containing protein;protein_id=WP_001534706.1;transl_table=11 NZ_NPOH01000032.1 RefSeq gene 24986 25834 . + . ID=gene-CCO46_RS24045;Name=CCO46_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24045;old_locus_tag=CCO46_24035 NZ_NPOH01000032.1 Protein Homology CDS 24986 25834 . + 0 ID=cds-WP_000190263.1;Parent=gene-CCO46_RS24045;Dbxref=GenBank:WP_000190263.1;Name=WP_000190263.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=CCO46_RS24045;product=MerR family transcriptional regulator;protein_id=WP_000190263.1;transl_table=11 ##sequence-region NZ_NPOH01000033.1 1 24824 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000033.1 RefSeq region 1 24824 . + . ID=NZ_NPOH01000033.1:1..24824;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000033.1 RefSeq pseudogene 129 2540 . + . ID=gene-CCO46_RS24055;Name=CCO46_RS24055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24055;old_locus_tag=CCO46_24045;partial=true;pseudo=true;start_range=.,129 NZ_NPOH01000033.1 Protein Homology CDS 129 2540 . + 0 ID=cds-CCO46_RS24055;Parent=gene-CCO46_RS24055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138064.1;locus_tag=CCO46_RS24055;partial=true;product=Tn3-like element TnAs3 family transposase;pseudo=true;start_range=.,129;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 2474 2965 . + . ID=gene-CCO46_RS24060;Name=CCO46_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24060;old_locus_tag=CCO46_24050 NZ_NPOH01000033.1 Protein Homology CDS 2474 2965 . + 0 ID=cds-WP_000068661.1;Parent=gene-CCO46_RS24060;Dbxref=GenBank:WP_000068661.1;Name=WP_000068661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196892.1;locus_tag=CCO46_RS24060;product=hypothetical protein;protein_id=WP_000068661.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 3442 3708 . - . ID=gene-CCO46_RS24070;Name=CCO46_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24070;old_locus_tag=CCO46_24060 NZ_NPOH01000033.1 Protein Homology CDS 3442 3708 . - 0 ID=cds-WP_000955263.1;Parent=gene-CCO46_RS24070;Dbxref=GenBank:WP_000955263.1;Name=WP_000955263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627831.1;locus_tag=CCO46_RS24070;product=hypothetical protein;protein_id=WP_000955263.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 3708 4202 . - . ID=gene-CCO46_RS24075;Name=CCO46_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24075;old_locus_tag=CCO46_24065 NZ_NPOH01000033.1 Protein Homology CDS 3708 4202 . - 0 ID=cds-WP_001459505.1;Parent=gene-CCO46_RS24075;Dbxref=GenBank:WP_001459505.1;Name=WP_001459505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001582574.1;locus_tag=CCO46_RS24075;product=hypothetical protein;protein_id=WP_001459505.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 4258 4860 . - . ID=gene-CCO46_RS24080;Name=CCO46_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24080;old_locus_tag=CCO46_24070 NZ_NPOH01000033.1 Protein Homology CDS 4258 4860 . - 0 ID=cds-WP_000517695.1;Parent=gene-CCO46_RS24080;Dbxref=GenBank:WP_000517695.1;Name=WP_000517695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697843.1;locus_tag=CCO46_RS24080;product=ProQ/FINO family protein;protein_id=WP_000517695.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 5214 6560 . + . ID=gene-CCO46_RS24090;Name=yagA;gbkey=Gene;gene=yagA;gene_biotype=protein_coding;locus_tag=CCO46_RS24090;old_locus_tag=CCO46_24080 NZ_NPOH01000033.1 Protein Homology CDS 5214 6560 . + 0 ID=cds-WP_001132032.1;Parent=gene-CCO46_RS24090;Dbxref=GenBank:WP_001132032.1;Name=WP_001132032.1;gbkey=CDS;gene=yagA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001132032.1;locus_tag=CCO46_RS24090;product=protein YagA;protein_id=WP_001132032.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 6839 8719 . + . ID=gene-CCO46_RS24095;Name=CCO46_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24095;old_locus_tag=CCO46_24085 NZ_NPOH01000033.1 Protein Homology CDS 6839 8719 . + 0 ID=cds-WP_001283341.1;Parent=gene-CCO46_RS24095;Dbxref=GenBank:WP_001283341.1;Name=WP_001283341.1;Ontology_term=GO:0019835,GO:0031640,GO:0050829,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytolysis|0019835||IEA,killing of cells of another organism|0031640||IEA,defense response to Gram-negative bacterium|0050829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610315.1;locus_tag=CCO46_RS24095;product=colicin Ia central receptor-binding domain-containing protein;protein_id=WP_001283341.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 8737 9084 . - . ID=gene-CCO46_RS24100;Name=CCO46_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24100;old_locus_tag=CCO46_24090 NZ_NPOH01000033.1 Protein Homology CDS 8737 9084 . - 0 ID=cds-WP_000762570.1;Parent=gene-CCO46_RS24100;Dbxref=GenBank:WP_000762570.1;Name=WP_000762570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762570.1;locus_tag=CCO46_RS24100;product=colicin 1B immunity protein;protein_id=WP_000762570.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 9203 9550 . + . ID=gene-CCO46_RS24105;Name=CCO46_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24105;old_locus_tag=CCO46_24095 NZ_NPOH01000033.1 Protein Homology CDS 9203 9550 . + 0 ID=cds-WP_000142436.1;Parent=gene-CCO46_RS24105;Dbxref=GenBank:WP_000142436.1;Name=WP_000142436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563283.1;locus_tag=CCO46_RS24105;product=DUF6404 family protein;protein_id=WP_000142436.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 9568 10158 . - . ID=gene-CCO46_RS24110;Name=CCO46_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24110;old_locus_tag=CCO46_24100 NZ_NPOH01000033.1 Protein Homology CDS 9568 10158 . - 0 ID=cds-WP_000194550.1;Parent=gene-CCO46_RS24110;Dbxref=GenBank:WP_000194550.1;Name=WP_000194550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545742.1;locus_tag=CCO46_RS24110;product=hypothetical protein;protein_id=WP_000194550.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 10158 10412 . - . ID=gene-CCO46_RS24115;Name=CCO46_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24115;old_locus_tag=CCO46_24105 NZ_NPOH01000033.1 Protein Homology CDS 10158 10412 . - 0 ID=cds-WP_000343103.1;Parent=gene-CCO46_RS24115;Dbxref=GenBank:WP_000343103.1;Name=WP_000343103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343103.1;locus_tag=CCO46_RS24115;product=hypothetical protein;protein_id=WP_000343103.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 10764 11765 . + . ID=gene-CCO46_RS24120;Name=CCO46_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24120;old_locus_tag=CCO46_24110 NZ_NPOH01000033.1 Protein Homology CDS 10764 11765 . + 0 ID=cds-WP_000774874.1;Parent=gene-CCO46_RS24120;Dbxref=GenBank:WP_000774874.1;Name=WP_000774874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785695.1;locus_tag=CCO46_RS24120;product=DUF4238 domain-containing protein;protein_id=WP_000774874.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 11941 12285 . - . ID=gene-CCO46_RS24125;Name=CCO46_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24125;old_locus_tag=CCO46_24115 NZ_NPOH01000033.1 Protein Homology CDS 11941 12285 . - 0 ID=cds-WP_000793307.1;Parent=gene-CCO46_RS24125;Dbxref=GenBank:WP_000793307.1;Name=WP_000793307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793307.1;locus_tag=CCO46_RS24125;product=hypothetical protein;protein_id=WP_000793307.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 12784 13038 . - . ID=gene-CCO46_RS24130;Name=CCO46_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24130;old_locus_tag=CCO46_24120 NZ_NPOH01000033.1 Protein Homology CDS 12784 13038 . - 0 ID=cds-WP_000678527.1;Parent=gene-CCO46_RS24130;Dbxref=GenBank:WP_000678527.1;Name=WP_000678527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000678527.1;locus_tag=CCO46_RS24130;product=hypothetical protein;protein_id=WP_000678527.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 13083 14009 . - . ID=gene-CCO46_RS24135;Name=CCO46_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24135;old_locus_tag=CCO46_24125 NZ_NPOH01000033.1 Protein Homology CDS 13083 14009 . - 0 ID=cds-WP_001290416.1;Parent=gene-CCO46_RS24135;Dbxref=GenBank:WP_001290416.1;Name=WP_001290416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290416.1;locus_tag=CCO46_RS24135;product=hypothetical protein;protein_id=WP_001290416.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 14541 14954 . + . ID=gene-CCO46_RS24140;Name=CCO46_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24140;old_locus_tag=CCO46_24130 NZ_NPOH01000033.1 Protein Homology CDS 14541 14954 . + 0 ID=cds-WP_000465036.1;Parent=gene-CCO46_RS24140;Dbxref=GenBank:WP_000465036.1;Name=WP_000465036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536595.1;locus_tag=CCO46_RS24140;product=hypothetical protein;protein_id=WP_000465036.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 14956 15735 . + . ID=gene-CCO46_RS24145;Name=CCO46_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24145;old_locus_tag=CCO46_24135 NZ_NPOH01000033.1 Protein Homology CDS 14956 15735 . + 0 ID=cds-WP_001164198.1;Parent=gene-CCO46_RS24145;Dbxref=GenBank:WP_001164198.1;Name=WP_001164198.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164196.1;locus_tag=CCO46_RS24145;product=site-specific integrase;protein_id=WP_001164198.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 15915 16559 . + . ID=gene-CCO46_RS24150;Name=CCO46_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24150;old_locus_tag=CCO46_24140 NZ_NPOH01000033.1 Protein Homology CDS 15915 16559 . + 0 ID=cds-WP_001144036.1;Parent=gene-CCO46_RS24150;Dbxref=GenBank:WP_001144036.1;Name=WP_001144036.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144037.1;locus_tag=CCO46_RS24150;product=ParA family protein;protein_id=WP_001144036.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 16646 16954 . + . ID=gene-CCO46_RS24155;Name=CCO46_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24155;old_locus_tag=CCO46_24145 NZ_NPOH01000033.1 Protein Homology CDS 16646 16954 . + 0 ID=cds-WP_000030199.1;Parent=gene-CCO46_RS24155;Dbxref=GenBank:WP_000030199.1;Name=WP_000030199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030202.1;locus_tag=CCO46_RS24155;product=hypothetical protein;protein_id=WP_000030199.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 17368 18348 . + . ID=gene-CCO46_RS24160;Name=CCO46_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24160;old_locus_tag=CCO46_24150 NZ_NPOH01000033.1 Protein Homology CDS 17368 18348 . + 0 ID=cds-WP_000688514.1;Parent=gene-CCO46_RS24160;Dbxref=GenBank:WP_000688514.1;Name=WP_000688514.1;Ontology_term=GO:0030541,GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;go_process=plasmid partitioning|0030541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401593.1;locus_tag=CCO46_RS24160;product=plasmid segregation protein ParM;protein_id=WP_000688514.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 18341 18757 . + . ID=gene-CCO46_RS24165;Name=CCO46_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24165;old_locus_tag=CCO46_24155 NZ_NPOH01000033.1 Protein Homology CDS 18341 18757 . + 0 ID=cds-WP_001278818.1;Parent=gene-CCO46_RS24165;Dbxref=GenBank:WP_001278818.1;Name=WP_001278818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278810.1;locus_tag=CCO46_RS24165;product=plasmid partitioning/stability family protein;protein_id=WP_001278818.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 18759 20033 . - . ID=gene-CCO46_RS24170;Name=CCO46_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24170;old_locus_tag=CCO46_24160 NZ_NPOH01000033.1 Protein Homology CDS 18759 20033 . - 0 ID=cds-WP_000457493.1;Parent=gene-CCO46_RS24170;Dbxref=GenBank:WP_000457493.1;Name=WP_000457493.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566943.1;locus_tag=CCO46_RS24170;product=Y-family DNA polymerase;protein_id=WP_000457493.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 20033 20470 . - . ID=gene-CCO46_RS24175;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=CCO46_RS24175;old_locus_tag=CCO46_24165 NZ_NPOH01000033.1 Protein Homology CDS 20033 20470 . - 0 ID=cds-WP_000109071.1;Parent=gene-CCO46_RS24175;Dbxref=GenBank:WP_000109071.1;Name=WP_000109071.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536590.1;locus_tag=CCO46_RS24175;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000109071.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 20467 20715 . - . ID=gene-CCO46_RS24180;Name=CCO46_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24180;old_locus_tag=CCO46_24170 NZ_NPOH01000033.1 Protein Homology CDS 20467 20715 . - 0 ID=cds-WP_000618110.1;Parent=gene-CCO46_RS24180;Dbxref=GenBank:WP_000618110.1;Name=WP_000618110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697964.1;locus_tag=CCO46_RS24180;product=DinI-like family protein;protein_id=WP_000618110.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 21133 22035 . + . ID=gene-CCO46_RS24190;Name=CCO46_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24190;old_locus_tag=CCO46_24180 NZ_NPOH01000033.1 Protein Homology CDS 21133 22035 . + 0 ID=cds-WP_000273918.1;Parent=gene-CCO46_RS24190;Dbxref=GenBank:WP_000273918.1;Name=WP_000273918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052643.1;locus_tag=CCO46_RS24190;product=DUF1281 domain-containing protein;protein_id=WP_000273918.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 22032 22343 . + . ID=gene-CCO46_RS24195;Name=CCO46_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24195;old_locus_tag=CCO46_24185 NZ_NPOH01000033.1 Protein Homology CDS 22032 22343 . + 0 ID=cds-WP_010891263.1;Parent=gene-CCO46_RS24195;Dbxref=GenBank:WP_010891263.1;Name=WP_010891263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858330.2;locus_tag=CCO46_RS24195;product=hypothetical protein;protein_id=WP_010891263.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 22420 23103 . + . ID=gene-CCO46_RS24200;Name=CCO46_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24200;old_locus_tag=CCO46_24190 NZ_NPOH01000033.1 Protein Homology CDS 22420 23103 . + 0 ID=cds-WP_000086178.1;Parent=gene-CCO46_RS24200;Dbxref=GenBank:WP_000086178.1;Name=WP_000086178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858331.2;locus_tag=CCO46_RS24200;product=DNA methylase;protein_id=WP_000086178.1;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 23104 23325 . + . ID=gene-CCO46_RS24205;Name=CCO46_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24205;old_locus_tag=CCO46_24195 NZ_NPOH01000033.1 Protein Homology CDS 23104 23325 . + 0 ID=cds-WP_001104887.1;Parent=gene-CCO46_RS24205;Dbxref=GenBank:WP_001104887.1;Name=WP_001104887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858332.1;locus_tag=CCO46_RS24205;product=hypothetical protein;protein_id=WP_001104887.1;transl_table=11 NZ_NPOH01000033.1 RefSeq pseudogene 23285 23771 . + . ID=gene-CCO46_RS24210;Name=CCO46_RS24210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24210;old_locus_tag=CCO46_24200;pseudo=true NZ_NPOH01000033.1 Protein Homology CDS 23285 23771 . + 0 ID=cds-CCO46_RS24210;Parent=gene-CCO46_RS24210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052646.1;locus_tag=CCO46_RS24210;product=DUF1380 family protein;pseudo=true;transl_table=11 NZ_NPOH01000033.1 RefSeq gene 23822 24592 . + . ID=gene-CCO46_RS25110;Name=CCO46_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25110 NZ_NPOH01000033.1 Protein Homology CDS 23822 24592 . + 0 ID=cds-WP_024133193.1;Parent=gene-CCO46_RS25110;Dbxref=GenBank:WP_024133193.1;Name=WP_024133193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523829.1;locus_tag=CCO46_RS25110;product=hypothetical protein;protein_id=WP_024133193.1;transl_table=11 ##sequence-region NZ_NPOH01000034.1 1 22964 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000034.1 RefSeq region 1 22964 . + . ID=NZ_NPOH01000034.1:1..22964;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000034.1 RefSeq gene 179 586 . + . ID=gene-CCO46_RS24225;Name=CCO46_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24225;old_locus_tag=CCO46_24215 NZ_NPOH01000034.1 Protein Homology CDS 179 586 . + 0 ID=cds-WP_000788200.1;Parent=gene-CCO46_RS24225;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0061077,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=CCO46_RS24225;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 926 1645 . + . ID=gene-CCO46_RS24230;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=CCO46_RS24230;old_locus_tag=CCO46_24220 NZ_NPOH01000034.1 Protein Homology CDS 926 1645 . + 0 ID=cds-WP_000787602.1;Parent=gene-CCO46_RS24230;Dbxref=GenBank:WP_000787602.1;Name=WP_000787602.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=CCO46_RS24230;product=adhesin/invasin protein PagN;protein_id=WP_000787602.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 1649 1864 . - . ID=gene-CCO46_RS24235;Name=CCO46_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24235;old_locus_tag=CCO46_24225 NZ_NPOH01000034.1 Protein Homology CDS 1649 1864 . - 0 ID=cds-WP_058331265.1;Parent=gene-CCO46_RS24235;Dbxref=GenBank:WP_058331265.1;Name=WP_058331265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=CCO46_RS24235;product=hypothetical protein;protein_id=WP_058331265.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 1984 2931 . - . ID=gene-CCO46_RS24240;Name=CCO46_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24240;old_locus_tag=CCO46_24230 NZ_NPOH01000034.1 Protein Homology CDS 1984 2931 . - 0 ID=cds-WP_058331264.1;Parent=gene-CCO46_RS24240;Dbxref=GenBank:WP_058331264.1;Name=WP_058331264.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=CCO46_RS24240;product=LysR family transcriptional regulator;protein_id=WP_058331264.1;transl_table=11 NZ_NPOH01000034.1 RefSeq pseudogene 3428 3665 . - . ID=gene-CCO46_RS24245;Name=CCO46_RS24245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24245;old_locus_tag=CCO46_24235;partial=true;pseudo=true;start_range=.,3428 NZ_NPOH01000034.1 Protein Homology CDS 3428 3665 . - 0 ID=cds-CCO46_RS24245;Parent=gene-CCO46_RS24245;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=CCO46_RS24245;partial=true;product=PerC family transcriptional regulator;pseudo=true;start_range=.,3428;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 3748 4569 . - . ID=gene-CCO46_RS24250;Name=CCO46_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24250;old_locus_tag=CCO46_24240 NZ_NPOH01000034.1 Protein Homology CDS 3748 4569 . - 0 ID=cds-WP_058331263.1;Parent=gene-CCO46_RS24250;Dbxref=GenBank:WP_058331263.1;Name=WP_058331263.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=CCO46_RS24250;product=polysaccharide deacetylase family protein;protein_id=WP_058331263.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 4976 5446 . - . ID=gene-CCO46_RS24255;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=CCO46_RS24255;old_locus_tag=CCO46_24245 NZ_NPOH01000034.1 Protein Homology CDS 4976 5446 . - 0 ID=cds-WP_023263009.1;Parent=gene-CCO46_RS24255;Dbxref=GenBank:WP_023263009.1;Name=WP_023263009.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266935.1;locus_tag=CCO46_RS24255;product=AfaD family invasin;protein_id=WP_023263009.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 5468 7978 . - . ID=gene-CCO46_RS24260;Name=CCO46_RS24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24260;old_locus_tag=CCO46_24250 NZ_NPOH01000034.1 Protein Homology CDS 5468 7978 . - 0 ID=cds-WP_094887814.1;Parent=gene-CCO46_RS24260;Dbxref=GenBank:WP_094887814.1;Name=WP_094887814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=CCO46_RS24260;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_094887814.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 8002 8742 . - . ID=gene-CCO46_RS24265;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=CCO46_RS24265;old_locus_tag=CCO46_24255 NZ_NPOH01000034.1 Protein Homology CDS 8002 8742 . - 0 ID=cds-WP_024792644.1;Parent=gene-CCO46_RS24265;Dbxref=GenBank:WP_024792644.1;Name=WP_024792644.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=CCO46_RS24265;product=pili assembly chaperone SafB;protein_id=WP_024792644.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 8817 9314 . - . ID=gene-CCO46_RS24270;Name=CCO46_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24270;old_locus_tag=CCO46_24260 NZ_NPOH01000034.1 Protein Homology CDS 8817 9314 . - 0 ID=cds-WP_094882795.1;Parent=gene-CCO46_RS24270;Dbxref=GenBank:WP_094882795.1;Name=WP_094882795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=CCO46_RS24270;product=Saf-pilin pilus formation protein SafA;protein_id=WP_094882795.1;transl_table=11 NZ_NPOH01000034.1 RefSeq pseudogene 10078 10648 . - . ID=gene-CCO46_RS24275;Name=CCO46_RS24275;end_range=10648,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24275;old_locus_tag=CCO46_24265;partial=true;pseudo=true NZ_NPOH01000034.1 Protein Homology CDS 10078 10648 . - 0 ID=cds-CCO46_RS24275;Parent=gene-CCO46_RS24275;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=10648,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=CCO46_RS24275;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 10582 10779 . - . ID=gene-CCO46_RS25945;Name=CCO46_RS25945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25945 NZ_NPOH01000034.1 Protein Homology CDS 10582 10779 . - 0 ID=cds-WP_001224041.1;Parent=gene-CCO46_RS25945;Dbxref=GenBank:WP_001224041.1;Name=WP_001224041.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=CCO46_RS25945;product=transposase;protein_id=WP_001224041.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 10832 11080 . + . ID=gene-CCO46_RS24280;Name=CCO46_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24280;old_locus_tag=CCO46_24270 NZ_NPOH01000034.1 Protein Homology CDS 10832 11080 . + 0 ID=cds-WP_001738030.1;Parent=gene-CCO46_RS24280;Dbxref=GenBank:WP_001738030.1;Name=WP_001738030.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446753.1;locus_tag=CCO46_RS24280;product=SymE family type I addiction module toxin;protein_id=WP_001738030.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 11212 11490 . - . ID=gene-CCO46_RS24285;Name=CCO46_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24285;old_locus_tag=CCO46_24275 NZ_NPOH01000034.1 Protein Homology CDS 11212 11490 . - 0 ID=cds-WP_077944729.1;Parent=gene-CCO46_RS24285;Dbxref=GenBank:WP_077944729.1;Name=WP_077944729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=CCO46_RS24285;product=hypothetical protein;protein_id=WP_077944729.1;transl_table=11 NZ_NPOH01000034.1 RefSeq pseudogene 11621 11778 . - . ID=gene-CCO46_RS25950;Name=CCO46_RS25950;end_range=11778,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25950;old_locus_tag=CCO46_24280;partial=true;pseudo=true;start_range=.,11621 NZ_NPOH01000034.1 Protein Homology CDS 11621 11778 . - 0 ID=cds-CCO46_RS25950;Parent=gene-CCO46_RS25950;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11778,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238642.1;locus_tag=CCO46_RS25950;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,11621;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 11808 12275 . - . ID=gene-CCO46_RS24295;Name=CCO46_RS24295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24295;old_locus_tag=CCO46_24285 NZ_NPOH01000034.1 Protein Homology CDS 11808 12275 . - 0 ID=cds-WP_063809038.1;Parent=gene-CCO46_RS24295;Dbxref=GenBank:WP_063809038.1;Name=WP_063809038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=CCO46_RS24295;product=hypothetical protein;protein_id=WP_063809038.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 13147 13380 . - . ID=gene-CCO46_RS25120;Name=CCO46_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25120 NZ_NPOH01000034.1 GeneMarkS-2+ CDS 13147 13380 . - 0 ID=cds-WP_124084119.1;Parent=gene-CCO46_RS25120;Dbxref=GenBank:WP_124084119.1;Name=WP_124084119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25120;product=hypothetical protein;protein_id=WP_124084119.1;transl_table=11 NZ_NPOH01000034.1 RefSeq pseudogene 13405 13577 . - . ID=gene-CCO46_RS25955;Name=CCO46_RS25955;end_range=13577,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25955;partial=true;pseudo=true;start_range=.,13405 NZ_NPOH01000034.1 Protein Homology CDS 13405 13577 . - 0 ID=cds-CCO46_RS25955;Parent=gene-CCO46_RS25955;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=13577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO46_RS25955;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,13405;transl_table=11 NZ_NPOH01000034.1 RefSeq pseudogene 13714 13959 . + . ID=gene-CCO46_RS25640;Name=CCO46_RS25640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25640;old_locus_tag=CCO46_24300;pseudo=true NZ_NPOH01000034.1 Protein Homology CDS 13714 13959 . + 0 ID=cds-CCO46_RS25640;Parent=gene-CCO46_RS25640;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=CCO46_RS25640;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 14026 14382 . - . ID=gene-CCO46_RS24315;Name=CCO46_RS24315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24315;old_locus_tag=CCO46_24305 NZ_NPOH01000034.1 Protein Homology CDS 14026 14382 . - 0 ID=cds-WP_031605041.1;Parent=gene-CCO46_RS24315;Dbxref=GenBank:WP_031605041.1;Name=WP_031605041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060108.1;locus_tag=CCO46_RS24315;product=hypothetical protein;protein_id=WP_031605041.1;transl_table=11 NZ_NPOH01000034.1 RefSeq pseudogene 14379 14558 . - . ID=gene-CCO46_RS25960;Name=CCO46_RS25960;end_range=14558,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25960;partial=true;pseudo=true NZ_NPOH01000034.1 Protein Homology CDS 14379 14558 . - 0 ID=cds-CCO46_RS25960;Parent=gene-CCO46_RS25960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14558,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049219.1;locus_tag=CCO46_RS25960;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 14884 15288 . - . ID=gene-CCO46_RS24320;Name=CCO46_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24320;old_locus_tag=CCO46_24310 NZ_NPOH01000034.1 Protein Homology CDS 14884 15288 . - 0 ID=cds-WP_001241576.1;Parent=gene-CCO46_RS24320;Dbxref=GenBank:WP_001241576.1;Name=WP_001241576.1;Ontology_term=GO:0042546;gbkey=CDS;go_process=cell wall biogenesis|0042546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241576.1;locus_tag=CCO46_RS24320;product=SMI1/KNR4 family protein;protein_id=WP_001241576.1;transl_table=11 NZ_NPOH01000034.1 RefSeq pseudogene 15279 18185 . - . ID=gene-CCO46_RS24325;Name=CCO46_RS24325;end_range=18185,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24325;old_locus_tag=CCO46_24315;partial=true;pseudo=true NZ_NPOH01000034.1 Protein Homology CDS 15279 18185 . - 0 ID=cds-CCO46_RS24325;Parent=gene-CCO46_RS24325;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18185,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503212.1;locus_tag=CCO46_RS24325;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 18176 18466 . + . ID=gene-CCO46_RS24330;Name=CCO46_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24330;old_locus_tag=CCO46_24320 NZ_NPOH01000034.1 Protein Homology CDS 18176 18466 . + 0 ID=cds-WP_015632802.1;Parent=gene-CCO46_RS24330;Dbxref=GenBank:WP_015632802.1;Name=WP_015632802.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=CCO46_RS24330;product=SymE family type I addiction module toxin;protein_id=WP_015632802.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 18632 19072 . - . ID=gene-CCO46_RS24335;Name=imm9;gbkey=Gene;gene=imm9;gene_biotype=protein_coding;locus_tag=CCO46_RS24335;old_locus_tag=CCO46_24325 NZ_NPOH01000034.1 Protein Homology CDS 18632 19072 . - 0 ID=cds-WP_097363533.1;Parent=gene-CCO46_RS24335;Dbxref=GenBank:WP_097363533.1;Name=WP_097363533.1;gbkey=CDS;gene=imm9;inference=COORDINATES: protein motif:HMM:NF026925.6;locus_tag=CCO46_RS24335;product=Imm9 family immunity protein;protein_id=WP_097363533.1;transl_table=11 NZ_NPOH01000034.1 RefSeq pseudogene 19104 19473 . - . ID=gene-CCO46_RS24340;Name=CCO46_RS24340;end_range=19473,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24340;old_locus_tag=CCO46_24330;partial=true;pseudo=true;start_range=.,19104 NZ_NPOH01000034.1 Protein Homology CDS 19104 19473 . - 0 ID=cds-CCO46_RS24340;Parent=gene-CCO46_RS24340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=19473,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO46_RS24340;partial=true;product=hypothetical protein;pseudo=true;start_range=.,19104;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 19515 19934 . - . ID=gene-CCO46_RS24345;Name=CCO46_RS24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24345;old_locus_tag=CCO46_24335 NZ_NPOH01000034.1 GeneMarkS-2+ CDS 19515 19934 . - 0 ID=cds-WP_125855784.1;Parent=gene-CCO46_RS24345;Dbxref=GenBank:WP_125855784.1;Name=WP_125855784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS24345;product=hypothetical protein;protein_id=WP_125855784.1;transl_table=11 NZ_NPOH01000034.1 RefSeq pseudogene 20249 20503 . - . ID=gene-CCO46_RS25965;Name=CCO46_RS25965;end_range=20503,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25965;partial=true;pseudo=true;start_range=.,20249 NZ_NPOH01000034.1 Protein Homology CDS 20249 20503 . - 0 ID=cds-CCO46_RS25965;Parent=gene-CCO46_RS25965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=20503,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO46_RS25965;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,20249;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 20645 21490 . - . ID=gene-CCO46_RS24355;Name=CCO46_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24355;old_locus_tag=CCO46_24345 NZ_NPOH01000034.1 Protein Homology CDS 20645 21490 . - 0 ID=cds-WP_001084940.1;Parent=gene-CCO46_RS24355;Dbxref=GenBank:WP_001084940.1;Name=WP_001084940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001084940.1;locus_tag=CCO46_RS24355;product=hypothetical protein;protein_id=WP_001084940.1;transl_table=11 NZ_NPOH01000034.1 RefSeq gene 21500 22964 . - . ID=gene-CCO46_RS24360;Name=CCO46_RS24360;end_range=22964,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24360;old_locus_tag=CCO46_24350;partial=true NZ_NPOH01000034.1 Protein Homology CDS 21500 22964 . - 1 ID=cds-WP_140439324.1;Parent=gene-CCO46_RS24360;Dbxref=GenBank:WP_140439324.1;Name=WP_140439324.1;end_range=22964,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272652.1;locus_tag=CCO46_RS24360;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_140439324.1;transl_table=11 ##sequence-region NZ_NPOH01000035.1 1 14672 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000035.1 RefSeq region 1 14672 . + . ID=NZ_NPOH01000035.1:1..14672;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000035.1 RefSeq gene 1 630 . + . ID=gene-CCO46_RS24365;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=CCO46_RS24365;old_locus_tag=CCO46_24355;partial=true;start_range=.,1 NZ_NPOH01000035.1 Protein Homology CDS 1 630 . + 0 ID=cds-WP_140439325.1;Parent=gene-CCO46_RS24365;Dbxref=GenBank:WP_140439325.1;Name=WP_140439325.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=CCO46_RS24365;partial=true;product=cell envelope integrity protein TolA;protein_id=WP_140439325.1;start_range=.,1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 754 2046 . + . ID=gene-CCO46_RS24370;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=CCO46_RS24370;old_locus_tag=CCO46_24360 NZ_NPOH01000035.1 Protein Homology CDS 754 2046 . + 0 ID=cds-WP_023262394.1;Parent=gene-CCO46_RS24370;Dbxref=GenBank:WP_023262394.1;Name=WP_023262394.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=CCO46_RS24370;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_023262394.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 2081 2605 . + . ID=gene-CCO46_RS24375;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=CCO46_RS24375;old_locus_tag=CCO46_24365 NZ_NPOH01000035.1 Protein Homology CDS 2081 2605 . + 0 ID=cds-WP_001176621.1;Parent=gene-CCO46_RS24375;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=CCO46_RS24375;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 2615 3403 . + . ID=gene-CCO46_RS24380;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=CCO46_RS24380;old_locus_tag=CCO46_24370 NZ_NPOH01000035.1 Protein Homology CDS 2615 3403 . + 0 ID=cds-WP_000097551.1;Parent=gene-CCO46_RS24380;Dbxref=GenBank:WP_000097551.1;Name=WP_000097551.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=CCO46_RS24380;product=cell division protein CpoB;protein_id=WP_000097551.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 3568 3643 . + . ID=gene-CCO46_RS24385;Name=CCO46_RS24385;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24385;old_locus_tag=CCO46_24375 NZ_NPOH01000035.1 tRNAscan-SE tRNA 3568 3643 . + . ID=rna-CCO46_RS24385;Parent=gene-CCO46_RS24385;anticodon=(pos:3601..3603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24385;product=tRNA-Lys NZ_NPOH01000035.1 tRNAscan-SE exon 3568 3643 . + . ID=exon-CCO46_RS24385-1;Parent=rna-CCO46_RS24385;anticodon=(pos:3601..3603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24385;product=tRNA-Lys NZ_NPOH01000035.1 RefSeq gene 3780 3855 . + . ID=gene-CCO46_RS24390;Name=CCO46_RS24390;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24390;old_locus_tag=CCO46_24380 NZ_NPOH01000035.1 tRNAscan-SE tRNA 3780 3855 . + . ID=rna-CCO46_RS24390;Parent=gene-CCO46_RS24390;anticodon=(pos:3813..3815);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24390;product=tRNA-Val NZ_NPOH01000035.1 tRNAscan-SE exon 3780 3855 . + . ID=exon-CCO46_RS24390-1;Parent=rna-CCO46_RS24390;anticodon=(pos:3813..3815);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24390;product=tRNA-Val NZ_NPOH01000035.1 RefSeq gene 3859 3934 . + . ID=gene-CCO46_RS24395;Name=CCO46_RS24395;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24395;old_locus_tag=CCO46_24385 NZ_NPOH01000035.1 tRNAscan-SE tRNA 3859 3934 . + . ID=rna-CCO46_RS24395;Parent=gene-CCO46_RS24395;anticodon=(pos:3892..3894);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24395;product=tRNA-Lys NZ_NPOH01000035.1 tRNAscan-SE exon 3859 3934 . + . ID=exon-CCO46_RS24395-1;Parent=rna-CCO46_RS24395;anticodon=(pos:3892..3894);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24395;product=tRNA-Lys NZ_NPOH01000035.1 RefSeq gene 4077 4152 . + . ID=gene-CCO46_RS24400;Name=CCO46_RS24400;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24400;old_locus_tag=CCO46_24390 NZ_NPOH01000035.1 tRNAscan-SE tRNA 4077 4152 . + . ID=rna-CCO46_RS24400;Parent=gene-CCO46_RS24400;anticodon=(pos:4110..4112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24400;product=tRNA-Lys NZ_NPOH01000035.1 tRNAscan-SE exon 4077 4152 . + . ID=exon-CCO46_RS24400-1;Parent=rna-CCO46_RS24400;anticodon=(pos:4110..4112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24400;product=tRNA-Lys NZ_NPOH01000035.1 RefSeq gene 4287 4362 . + . ID=gene-CCO46_RS24405;Name=CCO46_RS24405;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24405;old_locus_tag=CCO46_24395 NZ_NPOH01000035.1 tRNAscan-SE tRNA 4287 4362 . + . ID=rna-CCO46_RS24405;Parent=gene-CCO46_RS24405;anticodon=(pos:4320..4322);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24405;product=tRNA-Lys NZ_NPOH01000035.1 tRNAscan-SE exon 4287 4362 . + . ID=exon-CCO46_RS24405-1;Parent=rna-CCO46_RS24405;anticodon=(pos:4320..4322);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24405;product=tRNA-Lys NZ_NPOH01000035.1 RefSeq gene 4756 5799 . + . ID=gene-CCO46_RS24415;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=CCO46_RS24415;old_locus_tag=CCO46_24405 NZ_NPOH01000035.1 Protein Homology CDS 4756 5799 . + 0 ID=cds-WP_080160639.1;Parent=gene-CCO46_RS24415;Dbxref=GenBank:WP_080160639.1;Name=WP_080160639.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=CCO46_RS24415;product=quinolinate synthase NadA;protein_id=WP_080160639.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 5824 6543 . + . ID=gene-CCO46_RS24420;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=CCO46_RS24420;old_locus_tag=CCO46_24410 NZ_NPOH01000035.1 Protein Homology CDS 5824 6543 . + 0 ID=cds-WP_058332017.1;Parent=gene-CCO46_RS24420;Dbxref=GenBank:WP_058332017.1;Name=WP_058332017.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=CCO46_RS24420;product=nicotinamide riboside transporter PnuC;protein_id=WP_058332017.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 6540 7478 . - . ID=gene-CCO46_RS24425;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=CCO46_RS24425;old_locus_tag=CCO46_24415 NZ_NPOH01000035.1 Protein Homology CDS 6540 7478 . - 0 ID=cds-WP_000951251.1;Parent=gene-CCO46_RS24425;Dbxref=GenBank:WP_000951251.1;Name=WP_000951251.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=CCO46_RS24425;product=CDF family zinc transporter ZitB;protein_id=WP_000951251.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 7589 7975 . - . ID=gene-CCO46_RS24430;Name=CCO46_RS24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24430;old_locus_tag=CCO46_24420 NZ_NPOH01000035.1 Protein Homology CDS 7589 7975 . - 0 ID=cds-WP_000784380.1;Parent=gene-CCO46_RS24430;Dbxref=GenBank:WP_000784380.1;Name=WP_000784380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=CCO46_RS24430;product=YbgS-like family protein;protein_id=WP_000784380.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 8295 9347 . + . ID=gene-CCO46_RS24435;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=CCO46_RS24435;old_locus_tag=CCO46_24425 NZ_NPOH01000035.1 Protein Homology CDS 8295 9347 . + 0 ID=cds-WP_001109233.1;Parent=gene-CCO46_RS24435;Dbxref=GenBank:WP_001109233.1;Name=WP_001109233.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=CCO46_RS24435;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109233.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 9441 9986 . - . ID=gene-CCO46_RS24440;Name=CCO46_RS24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24440;old_locus_tag=CCO46_24430 NZ_NPOH01000035.1 Protein Homology CDS 9441 9986 . - 0 ID=cds-WP_000970374.1;Parent=gene-CCO46_RS24440;Dbxref=GenBank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=CCO46_RS24440;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 10001 10846 . - . ID=gene-CCO46_RS24445;Name=CCO46_RS24445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24445;old_locus_tag=CCO46_24435 NZ_NPOH01000035.1 Protein Homology CDS 10001 10846 . - 0 ID=cds-WP_000086831.1;Parent=gene-CCO46_RS24445;Dbxref=GenBank:WP_000086831.1;Name=WP_000086831.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=CCO46_RS24445;product=fumarate hydratase;protein_id=WP_000086831.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 10976 11866 . + . ID=gene-CCO46_RS24450;Name=CCO46_RS24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24450;old_locus_tag=CCO46_24440 NZ_NPOH01000035.1 Protein Homology CDS 10976 11866 . + 0 ID=cds-WP_000405924.1;Parent=gene-CCO46_RS24450;Dbxref=GenBank:WP_000405924.1;Name=WP_000405924.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=CCO46_RS24450;product=LysR family transcriptional regulator;protein_id=WP_000405924.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 11867 12850 . - . ID=gene-CCO46_RS24455;Name=CCO46_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24455;old_locus_tag=CCO46_24445 NZ_NPOH01000035.1 Protein Homology CDS 11867 12850 . - 0 ID=cds-WP_000282119.1;Parent=gene-CCO46_RS24455;Dbxref=GenBank:WP_000282119.1;Name=WP_000282119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=CCO46_RS24455;product=LysR family transcriptional regulator;protein_id=WP_000282119.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 13073 14341 . + . ID=gene-CCO46_RS24460;Name=CCO46_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24460;old_locus_tag=CCO46_24450 NZ_NPOH01000035.1 Protein Homology CDS 13073 14341 . + 0 ID=cds-WP_000074129.1;Parent=gene-CCO46_RS24460;Dbxref=GenBank:WP_000074129.1;Name=WP_000074129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=CCO46_RS24460;product=SLC13 family permease;protein_id=WP_000074129.1;transl_table=11 NZ_NPOH01000035.1 RefSeq gene 14391 14639 . + . ID=gene-CCO46_RS24465;Name=CCO46_RS24465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24465;old_locus_tag=CCO46_24455 NZ_NPOH01000035.1 Protein Homology CDS 14391 14639 . + 0 ID=cds-WP_023232566.1;Parent=gene-CCO46_RS24465;Dbxref=GenBank:WP_023232566.1;Name=WP_023232566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=CCO46_RS24465;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_023232566.1;transl_table=11 ##sequence-region NZ_NPOH01000036.1 1 11598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000036.1 RefSeq region 1 11598 . + . ID=NZ_NPOH01000036.1:1..11598;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000036.1 RefSeq gene 8 123 . + . ID=gene-CCO46_RS24470;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO46_RS24470;old_locus_tag=CCO46_24460 NZ_NPOH01000036.1 cmsearch rRNA 8 123 . + . ID=rna-CCO46_RS24470;Parent=gene-CCO46_RS24470;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS24470;product=5S ribosomal RNA NZ_NPOH01000036.1 cmsearch exon 8 123 . + . ID=exon-CCO46_RS24470-1;Parent=rna-CCO46_RS24470;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS24470;product=5S ribosomal RNA NZ_NPOH01000036.1 RefSeq gene 736 1530 . - . ID=gene-CCO46_RS24475;Name=CCO46_RS24475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24475;old_locus_tag=CCO46_24465 NZ_NPOH01000036.1 Protein Homology CDS 736 1530 . - 0 ID=cds-WP_000246207.1;Parent=gene-CCO46_RS24475;Dbxref=GenBank:WP_000246207.1;Name=WP_000246207.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246207.1;locus_tag=CCO46_RS24475;product=IclR family transcriptional regulator;protein_id=WP_000246207.1;transl_table=11 NZ_NPOH01000036.1 RefSeq gene 1648 2520 . + . ID=gene-CCO46_RS24480;Name=CCO46_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24480;old_locus_tag=CCO46_24470 NZ_NPOH01000036.1 Protein Homology CDS 1648 2520 . + 0 ID=cds-WP_023201554.1;Parent=gene-CCO46_RS24480;Dbxref=GenBank:WP_023201554.1;Name=WP_023201554.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521142.1;locus_tag=CCO46_RS24480;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_023201554.1;transl_table=11 NZ_NPOH01000036.1 RefSeq gene 2523 3533 . + . ID=gene-CCO46_RS24485;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=CCO46_RS24485;old_locus_tag=CCO46_24475 NZ_NPOH01000036.1 Protein Homology CDS 2523 3533 . + 0 ID=cds-WP_000932712.1;Parent=gene-CCO46_RS24485;Dbxref=GenBank:WP_000932712.1;Name=WP_000932712.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932712.1;locus_tag=CCO46_RS24485;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_000932712.1;transl_table=11 NZ_NPOH01000036.1 RefSeq gene 3619 3885 . + . ID=gene-CCO46_RS24490;Name=CCO46_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24490;old_locus_tag=CCO46_24480 NZ_NPOH01000036.1 Protein Homology CDS 3619 3885 . + 0 ID=cds-WP_094887848.1;Parent=gene-CCO46_RS24490;Dbxref=GenBank:WP_094887848.1;Name=WP_094887848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663244.1;locus_tag=CCO46_RS24490;product=UxaA family hydrolase;protein_id=WP_094887848.1;transl_table=11 NZ_NPOH01000036.1 RefSeq gene 3912 5087 . + . ID=gene-CCO46_RS24495;Name=CCO46_RS24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24495;old_locus_tag=CCO46_24485 NZ_NPOH01000036.1 Protein Homology CDS 3912 5087 . + 0 ID=cds-WP_023201553.1;Parent=gene-CCO46_RS24495;Dbxref=GenBank:WP_023201553.1;Name=WP_023201553.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: protein motif:HMM:NF045169.3;locus_tag=CCO46_RS24495;product=UxaA family hydrolase;protein_id=WP_023201553.1;transl_table=11 NZ_NPOH01000036.1 RefSeq gene 5125 6093 . + . ID=gene-CCO46_RS24500;Name=CCO46_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24500;old_locus_tag=CCO46_24490 NZ_NPOH01000036.1 Protein Homology CDS 5125 6093 . + 0 ID=cds-WP_024146078.1;Parent=gene-CCO46_RS24500;Dbxref=GenBank:WP_024146078.1;Name=WP_024146078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166751.1;locus_tag=CCO46_RS24500;product=2-keto-3-deoxygluconate permease;protein_id=WP_024146078.1;transl_table=11 NZ_NPOH01000036.1 RefSeq gene 6081 6986 . + . ID=gene-CCO46_RS24505;Name=CCO46_RS24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24505;old_locus_tag=CCO46_24495 NZ_NPOH01000036.1 Protein Homology CDS 6081 6986 . + 0 ID=cds-WP_023201551.1;Parent=gene-CCO46_RS24505;Dbxref=GenBank:WP_023201551.1;Name=WP_023201551.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007866609.1;locus_tag=CCO46_RS24505;product=dihydrodipicolinate synthase family protein;protein_id=WP_023201551.1;transl_table=11 NZ_NPOH01000036.1 RefSeq gene 7382 8410 . + . ID=gene-CCO46_RS24510;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CCO46_RS24510;old_locus_tag=CCO46_24500 NZ_NPOH01000036.1 Protein Homology CDS 7382 8410 . + 0 ID=cds-WP_000149799.1;Parent=gene-CCO46_RS24510;Dbxref=GenBank:WP_000149799.1;Name=WP_000149799.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=CCO46_RS24510;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149799.1;transl_table=11 NZ_NPOH01000036.1 RefSeq gene 8407 9369 . + . ID=gene-CCO46_RS24515;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=CCO46_RS24515;old_locus_tag=CCO46_24505 NZ_NPOH01000036.1 Protein Homology CDS 8407 9369 . + 0 ID=cds-WP_000655746.1;Parent=gene-CCO46_RS24515;Dbxref=GenBank:WP_000655746.1;Name=WP_000655746.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=CCO46_RS24515;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11 NZ_NPOH01000036.1 RefSeq gene 9404 10354 . - . ID=gene-CCO46_RS24520;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=CCO46_RS24520;old_locus_tag=CCO46_24510 NZ_NPOH01000036.1 Protein Homology CDS 9404 10354 . - 0 ID=cds-WP_000023069.1;Parent=gene-CCO46_RS24520;Dbxref=GenBank:WP_000023069.1;Name=WP_000023069.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=CCO46_RS24520;product=type I pantothenate kinase;protein_id=WP_000023069.1;transl_table=11 NZ_NPOH01000036.1 RefSeq gene 10563 10736 . - . ID=gene-CCO46_RS24530;Name=CCO46_RS24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24530;old_locus_tag=CCO46_24520 NZ_NPOH01000036.1 Protein Homology CDS 10563 10736 . - 0 ID=cds-WP_001621476.1;Parent=gene-CCO46_RS24530;Dbxref=GenBank:WP_001621476.1;Name=WP_001621476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=CCO46_RS24530;product=hypothetical protein;protein_id=WP_001621476.1;transl_table=11 NZ_NPOH01000036.1 RefSeq gene 10756 10831 . + . ID=gene-CCO46_RS24535;Name=CCO46_RS24535;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24535;old_locus_tag=CCO46_24525 NZ_NPOH01000036.1 tRNAscan-SE tRNA 10756 10831 . + . ID=rna-CCO46_RS24535;Parent=gene-CCO46_RS24535;anticodon=(pos:10789..10791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24535;product=tRNA-Thr NZ_NPOH01000036.1 tRNAscan-SE exon 10756 10831 . + . ID=exon-CCO46_RS24535-1;Parent=rna-CCO46_RS24535;anticodon=(pos:10789..10791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24535;product=tRNA-Thr NZ_NPOH01000036.1 RefSeq gene 10840 10924 . + . ID=gene-CCO46_RS24540;Name=CCO46_RS24540;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24540;old_locus_tag=CCO46_24530 NZ_NPOH01000036.1 tRNAscan-SE tRNA 10840 10924 . + . ID=rna-CCO46_RS24540;Parent=gene-CCO46_RS24540;anticodon=(pos:10874..10876);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24540;product=tRNA-Tyr NZ_NPOH01000036.1 tRNAscan-SE exon 10840 10924 . + . ID=exon-CCO46_RS24540-1;Parent=rna-CCO46_RS24540;anticodon=(pos:10874..10876);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24540;product=tRNA-Tyr NZ_NPOH01000036.1 RefSeq gene 11041 11115 . + . ID=gene-CCO46_RS24545;Name=CCO46_RS24545;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24545;old_locus_tag=CCO46_24535 NZ_NPOH01000036.1 tRNAscan-SE tRNA 11041 11115 . + . ID=rna-CCO46_RS24545;Parent=gene-CCO46_RS24545;anticodon=(pos:11074..11076);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24545;product=tRNA-Gly NZ_NPOH01000036.1 tRNAscan-SE exon 11041 11115 . + . ID=exon-CCO46_RS24545-1;Parent=rna-CCO46_RS24545;anticodon=(pos:11074..11076);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24545;product=tRNA-Gly NZ_NPOH01000036.1 RefSeq gene 11122 11197 . + . ID=gene-CCO46_RS24550;Name=CCO46_RS24550;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24550;old_locus_tag=CCO46_24540 NZ_NPOH01000036.1 tRNAscan-SE tRNA 11122 11197 . + . ID=rna-CCO46_RS24550;Parent=gene-CCO46_RS24550;anticodon=(pos:11155..11157);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24550;product=tRNA-Thr NZ_NPOH01000036.1 tRNAscan-SE exon 11122 11197 . + . ID=exon-CCO46_RS24550-1;Parent=rna-CCO46_RS24550;anticodon=(pos:11155..11157);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24550;product=tRNA-Thr NZ_NPOH01000036.1 RefSeq gene 11313 11598 . + . ID=gene-CCO46_RS24555;Name=CCO46_RS24555;end_range=11598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24555;old_locus_tag=CCO46_24545;partial=true NZ_NPOH01000036.1 Protein Homology CDS 11313 11598 . + 0 ID=cds-WP_000031682.1-2;Parent=gene-CCO46_RS24555;Dbxref=GenBank:WP_000031682.1;Name=WP_000031682.1;Ontology_term=GO:0003924,GO:0005525;end_range=11598,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO46_RS24555;partial=true;product=GTP-binding protein;protein_id=WP_000031682.1;transl_table=11 ##sequence-region NZ_NPOH01000037.1 1 10835 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000037.1 RefSeq region 1 10835 . + . ID=NZ_NPOH01000037.1:1..10835;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000037.1 RefSeq pseudogene 1 75 . + . ID=gene-CCO46_RS25130;Name=CCO46_RS25130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25130;partial=true;pseudo=true;start_range=.,1 NZ_NPOH01000037.1 Protein Homology CDS 1 75 . + 0 ID=cds-CCO46_RS25130;Parent=gene-CCO46_RS25130;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=CCO46_RS25130;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_NPOH01000037.1 RefSeq gene 580 1236 . + . ID=gene-CCO46_RS24560;Name=CCO46_RS24560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24560;old_locus_tag=CCO46_24550 NZ_NPOH01000037.1 Protein Homology CDS 580 1236 . + 0 ID=cds-WP_001516695.1;Parent=gene-CCO46_RS24560;Dbxref=GenBank:WP_001516695.1;Name=WP_001516695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001516695.1;locus_tag=CCO46_RS24560;product=quinolone resistance pentapeptide repeat protein QnrS1;protein_id=WP_001516695.1;transl_table=11 NZ_NPOH01000037.1 RefSeq gene 1555 2169 . - . ID=gene-CCO46_RS24565;Name=CCO46_RS24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24565;old_locus_tag=CCO46_24555 NZ_NPOH01000037.1 Protein Homology CDS 1555 2169 . - 0 ID=cds-WP_014839983.1;Parent=gene-CCO46_RS24565;Dbxref=GenBank:WP_014839983.1;Name=WP_014839983.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839983.1;locus_tag=CCO46_RS24565;product=recombinase family protein;protein_id=WP_014839983.1;transl_table=11 NZ_NPOH01000037.1 RefSeq pseudogene 2331 2513 . + . ID=gene-CCO46_RS24570;Name=CCO46_RS24570;end_range=2513,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24570;old_locus_tag=CCO46_24560;partial=true;pseudo=true NZ_NPOH01000037.1 Protein Homology CDS 2331 2513 . + 0 ID=cds-CCO46_RS24570;Parent=gene-CCO46_RS24570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152392.1;locus_tag=CCO46_RS24570;partial=true;product=DUF4158 domain-containing protein;pseudo=true;transl_table=11 NZ_NPOH01000037.1 RefSeq gene 2604 3194 . + . ID=gene-CCO46_RS24575;Name=CCO46_RS24575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24575;old_locus_tag=CCO46_24565 NZ_NPOH01000037.1 Protein Homology CDS 2604 3194 . + 0 ID=cds-WP_012477564.1;Parent=gene-CCO46_RS24575;Dbxref=GenBank:WP_012477564.1;Name=WP_012477564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001366942.1;locus_tag=CCO46_RS24575;product=plasmid pRiA4b ORF-3 family protein;protein_id=WP_012477564.1;transl_table=11 NZ_NPOH01000037.1 RefSeq gene 3331 3903 . + . ID=gene-CCO46_RS24580;Name=CCO46_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24580;old_locus_tag=CCO46_24570 NZ_NPOH01000037.1 Protein Homology CDS 3331 3903 . + 0 ID=cds-WP_001493762.1;Parent=gene-CCO46_RS24580;Dbxref=GenBank:WP_001493762.1;Name=WP_001493762.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001493762.1;locus_tag=CCO46_RS24580;product=recombinase family protein;protein_id=WP_001493762.1;transl_table=11 NZ_NPOH01000037.1 RefSeq gene 3940 5331 . + . ID=gene-CCO46_RS24585;Name=CCO46_RS24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24585;old_locus_tag=CCO46_24575 NZ_NPOH01000037.1 Protein Homology CDS 3940 5331 . + 0 ID=cds-WP_014839878.1;Parent=gene-CCO46_RS24585;Dbxref=GenBank:WP_014839878.1;Name=WP_014839878.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001493761.1;locus_tag=CCO46_RS24585;product=ISKra4-like element ISKpn19 family transposase;protein_id=WP_014839878.1;transl_table=11 NZ_NPOH01000037.1 RefSeq gene 5388 5630 . + . ID=gene-CCO46_RS24590;Name=CCO46_RS24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24590;old_locus_tag=CCO46_24580 NZ_NPOH01000037.1 Protein Homology CDS 5388 5630 . + 0 ID=cds-WP_000844627.1;Parent=gene-CCO46_RS24590;Dbxref=GenBank:WP_000844627.1;Name=WP_000844627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844627.1;locus_tag=CCO46_RS24590;product=transposase;protein_id=WP_000844627.1;transl_table=11 NZ_NPOH01000037.1 RefSeq gene 5662 6312 . - . ID=gene-CCO46_RS24595;Name=tetR(A);gbkey=Gene;gene=tetR(A);gene_biotype=protein_coding;locus_tag=CCO46_RS24595;old_locus_tag=CCO46_24585 NZ_NPOH01000037.1 Protein Homology CDS 5662 6312 . - 0 ID=cds-WP_001493764.1;Parent=gene-CCO46_RS24595;Dbxref=GenBank:WP_001493764.1;Name=WP_001493764.1;gbkey=CDS;gene=tetR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164043.1;locus_tag=CCO46_RS24595;product=tetracycline resistance transcriptional repressor TetR(A);protein_id=WP_001493764.1;transl_table=11 NZ_NPOH01000037.1 RefSeq gene 6418 7617 . + . ID=gene-CCO46_RS24600;Name=tet(A);gbkey=Gene;gene=tet(A);gene_biotype=protein_coding;locus_tag=CCO46_RS24600;old_locus_tag=CCO46_24590 NZ_NPOH01000037.1 Protein Homology CDS 6418 7617 . + 0 ID=cds-WP_021559057.1;Parent=gene-CCO46_RS24600;Dbxref=GenBank:WP_021559057.1;Name=WP_021559057.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(A);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804064.1;locus_tag=CCO46_RS24600;product=tetracycline efflux MFS transporter Tet(A);protein_id=WP_021559057.1;transl_table=11 NZ_NPOH01000037.1 RefSeq gene 7649 8533 . - . ID=gene-CCO46_RS24605;Name=CCO46_RS24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24605;old_locus_tag=CCO46_24595 NZ_NPOH01000037.1 Protein Homology CDS 7649 8533 . - 0 ID=cds-WP_000058717.1;Parent=gene-CCO46_RS24605;Dbxref=GenBank:WP_000058717.1;Name=WP_000058717.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058717.1;locus_tag=CCO46_RS24605;product=DMT family transporter;protein_id=WP_000058717.1;transl_table=11 NZ_NPOH01000037.1 RefSeq gene 8671 9063 . - . ID=gene-CCO46_RS24610;Name=CCO46_RS24610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24610;old_locus_tag=CCO46_24600 NZ_NPOH01000037.1 Protein Homology CDS 8671 9063 . - 0 ID=cds-WP_001351729.1;Parent=gene-CCO46_RS24610;Dbxref=GenBank:WP_001351729.1;Name=WP_001351729.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013053.6;locus_tag=CCO46_RS24610;product=cysteine hydrolase family protein;protein_id=WP_001351729.1;transl_table=11 NZ_NPOH01000037.1 RefSeq pseudogene 9067 10107 . + . ID=gene-CCO46_RS24615;Name=CCO46_RS24615;end_range=10107,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24615;old_locus_tag=CCO46_24605;partial=true;pseudo=true;start_range=.,9067 NZ_NPOH01000037.1 Protein Homology CDS 9067 10107 . + 0 ID=cds-CCO46_RS24615;Parent=gene-CCO46_RS24615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=10107,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=CCO46_RS24615;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,9067;transl_table=11 NZ_NPOH01000037.1 RefSeq gene 10254 10835 . - . ID=gene-CCO46_RS24620;Name=CCO46_RS24620;end_range=10835,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24620;old_locus_tag=CCO46_24610;partial=true NZ_NPOH01000037.1 Protein Homology CDS 10254 10835 . - 0 ID=cds-WP_227648742.1;Parent=gene-CCO46_RS24620;Dbxref=GenBank:WP_227648742.1;Name=WP_227648742.1;end_range=10835,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460137.1;locus_tag=CCO46_RS24620;partial=true;product=serine hydrolase;protein_id=WP_227648742.1;transl_table=11 ##sequence-region NZ_NPOH01000038.1 1 9580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000038.1 RefSeq region 1 9580 . + . ID=NZ_NPOH01000038.1:1..9580;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000038.1 RefSeq gene 177 779 . - . ID=gene-CCO46_RS24630;Name=CCO46_RS24630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24630;old_locus_tag=CCO46_24620 NZ_NPOH01000038.1 Protein Homology CDS 177 779 . - 0 ID=cds-WP_000244731.1;Parent=gene-CCO46_RS24630;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=CCO46_RS24630;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11 NZ_NPOH01000038.1 RefSeq gene 989 1570 . - . ID=gene-CCO46_RS24635;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=CCO46_RS24635;old_locus_tag=CCO46_24625 NZ_NPOH01000038.1 Protein Homology CDS 989 1570 . - 0 ID=cds-WP_023202233.1;Parent=gene-CCO46_RS24635;Dbxref=GenBank:WP_023202233.1;Name=WP_023202233.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=CCO46_RS24635;product=ACP phosphodiesterase;protein_id=WP_023202233.1;transl_table=11 NZ_NPOH01000038.1 RefSeq gene 1664 2728 . + . ID=gene-CCO46_RS24640;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CCO46_RS24640;old_locus_tag=CCO46_24630 NZ_NPOH01000038.1 Protein Homology CDS 1664 2728 . + 0 ID=cds-WP_001266530.1;Parent=gene-CCO46_RS24640;Dbxref=GenBank:WP_001266530.1;Name=WP_001266530.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=CCO46_RS24640;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266530.1;transl_table=11 NZ_NPOH01000038.1 RefSeq gene 2925 4052 . + . ID=gene-CCO46_RS24650;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CCO46_RS24650;old_locus_tag=CCO46_24640 NZ_NPOH01000038.1 Protein Homology CDS 2925 4052 . + 0 ID=cds-WP_000667305.1;Parent=gene-CCO46_RS24650;Dbxref=GenBank:WP_000667305.1;Name=WP_000667305.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=CCO46_RS24650;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667305.1;transl_table=11 NZ_NPOH01000038.1 RefSeq gene 4075 4407 . + . ID=gene-CCO46_RS24655;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CCO46_RS24655;old_locus_tag=CCO46_24645 NZ_NPOH01000038.1 Protein Homology CDS 4075 4407 . + 0 ID=cds-WP_000007628.1;Parent=gene-CCO46_RS24655;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=CCO46_RS24655;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11 NZ_NPOH01000038.1 RefSeq gene 4435 6282 . + . ID=gene-CCO46_RS24660;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=CCO46_RS24660;old_locus_tag=CCO46_24650 NZ_NPOH01000038.1 Protein Homology CDS 4435 6282 . + 0 ID=cds-WP_000934811.1;Parent=gene-CCO46_RS24660;Dbxref=GenBank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=CCO46_RS24660;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11 NZ_NPOH01000038.1 RefSeq gene 6293 7264 . + . ID=gene-CCO46_RS24665;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=CCO46_RS24665;old_locus_tag=CCO46_24655 NZ_NPOH01000038.1 Protein Homology CDS 6293 7264 . + 0 ID=cds-WP_000046629.1;Parent=gene-CCO46_RS24665;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=CCO46_RS24665;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11 NZ_NPOH01000038.1 RefSeq gene 7413 7778 . + . ID=gene-CCO46_RS24670;Name=CCO46_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24670;old_locus_tag=CCO46_24660 NZ_NPOH01000038.1 Protein Homology CDS 7413 7778 . + 0 ID=cds-WP_000793035.1;Parent=gene-CCO46_RS24670;Dbxref=GenBank:WP_000793035.1;Name=WP_000793035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=CCO46_RS24670;product=VOC family protein;protein_id=WP_000793035.1;transl_table=11 NZ_NPOH01000038.1 RefSeq gene 7804 8496 . + . ID=gene-CCO46_RS24675;Name=CCO46_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24675;old_locus_tag=CCO46_24665 NZ_NPOH01000038.1 Protein Homology CDS 7804 8496 . + 0 ID=cds-WP_000198318.1;Parent=gene-CCO46_RS24675;Dbxref=GenBank:WP_000198318.1;Name=WP_000198318.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=CCO46_RS24675;product=helix-turn-helix transcriptional regulator;protein_id=WP_000198318.1;transl_table=11 NZ_NPOH01000038.1 RefSeq gene 8666 9013 . + . ID=gene-CCO46_RS24680;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=CCO46_RS24680;old_locus_tag=CCO46_24670 NZ_NPOH01000038.1 Protein Homology CDS 8666 9013 . + 0 ID=cds-WP_000974818.1;Parent=gene-CCO46_RS24680;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=CCO46_RS24680;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11 NZ_NPOH01000038.1 RefSeq pseudogene 9261 9452 . - . ID=gene-CCO46_RS25280;Name=impX;end_range=9452,.;gbkey=Gene;gene=impX;gene_biotype=pseudogene;locus_tag=CCO46_RS25280;old_locus_tag=CCO46_24680;partial=true;pseudo=true NZ_NPOH01000038.1 Protein Homology CDS 9261 9452 . - 0 ID=cds-CCO46_RS25280;Parent=gene-CCO46_RS25280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9452,.;gbkey=CDS;gene=impX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989124.1;locus_tag=CCO46_RS25280;partial=true;product=nucleoside efflux transporter ImpX;pseudo=true;transl_table=11 ##sequence-region NZ_NPOH01000039.1 1 6151 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000039.1 RefSeq region 1 6151 . + . ID=NZ_NPOH01000039.1:1..6151;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000039.1 RefSeq gene 104 409 . - . ID=gene-CCO46_RS24700;Name=CCO46_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24700;old_locus_tag=CCO46_24690 NZ_NPOH01000039.1 Protein Homology CDS 104 409 . - 0 ID=cds-WP_001255015.1;Parent=gene-CCO46_RS24700;Dbxref=GenBank:WP_001255015.1;Name=WP_001255015.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001255015.1;locus_tag=CCO46_RS24700;product=LysR family transcriptional regulator;protein_id=WP_001255015.1;transl_table=11 NZ_NPOH01000039.1 RefSeq gene 437 1651 . - . ID=gene-CCO46_RS24705;Name=floR;gbkey=Gene;gene=floR;gene_biotype=protein_coding;locus_tag=CCO46_RS24705;old_locus_tag=CCO46_24695 NZ_NPOH01000039.1 Protein Homology CDS 437 1651 . - 0 ID=cds-WP_023300759.1;Parent=gene-CCO46_RS24705;Dbxref=GenBank:WP_023300759.1;Name=WP_023300759.1;gbkey=CDS;gene=floR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214125.1;locus_tag=CCO46_RS24705;product=chloramphenicol/florfenicol efflux MFS transporter FloR;protein_id=WP_023300759.1;transl_table=11 NZ_NPOH01000039.1 RefSeq gene 1868 2752 . - . ID=gene-CCO46_RS25645;Name=CCO46_RS25645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25645;old_locus_tag=CCO46_24700 NZ_NPOH01000039.1 Protein Homology CDS 1868 2752 . - 0 ID=cds-WP_001447541.1;Parent=gene-CCO46_RS25645;Dbxref=GenBank:WP_001447541.1;Name=WP_001447541.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023271.6;locus_tag=CCO46_RS25645;product=DUF3363 domain-containing protein;protein_id=WP_001447541.1;transl_table=11 NZ_NPOH01000039.1 RefSeq gene 2783 4276 . - . ID=gene-CCO46_RS24715;Name=CCO46_RS24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24715;old_locus_tag=CCO46_24705 NZ_NPOH01000039.1 Protein Homology CDS 2783 4276 . - 0 ID=cds-WP_001120888.1;Parent=gene-CCO46_RS24715;Dbxref=GenBank:WP_001120888.1;Name=WP_001120888.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120888.1;locus_tag=CCO46_RS24715;product=IS91-like element ISCR2 family transposase;protein_id=WP_001120888.1;transl_table=11 NZ_NPOH01000039.1 RefSeq gene 4487 4711 . - . ID=gene-CCO46_RS24720;Name=CCO46_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24720;old_locus_tag=CCO46_24710 NZ_NPOH01000039.1 Protein Homology CDS 4487 4711 . - 0 ID=cds-WP_000743213.1;Parent=gene-CCO46_RS24720;Dbxref=GenBank:WP_000743213.1;Name=WP_000743213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743213.1;locus_tag=CCO46_RS24720;product=hypothetical protein;protein_id=WP_000743213.1;transl_table=11 NZ_NPOH01000039.1 RefSeq gene 4708 5445 . - . ID=gene-CCO46_RS24725;Name=CCO46_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24725;old_locus_tag=CCO46_24715 NZ_NPOH01000039.1 Protein Homology CDS 4708 5445 . - 0 ID=cds-WP_001446887.1;Parent=gene-CCO46_RS24725;Dbxref=GenBank:WP_001446887.1;Name=WP_001446887.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370723.1;locus_tag=CCO46_RS24725;product=recombinase family protein;protein_id=WP_001446887.1;transl_table=11 NZ_NPOH01000039.1 RefSeq gene 5931 6071 . - . ID=gene-CCO46_RS25285;Name=CCO46_RS25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25285 NZ_NPOH01000039.1 GeneMarkS-2+ CDS 5931 6071 . - 0 ID=cds-WP_001044210.1;Parent=gene-CCO46_RS25285;Dbxref=GenBank:WP_001044210.1;Name=WP_001044210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS25285;product=hypothetical protein;protein_id=WP_001044210.1;transl_table=11 NZ_NPOH01000039.1 RefSeq pseudogene 6077 6151 . - . ID=gene-CCO46_RS25135;Name=CCO46_RS25135;end_range=6151,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25135;partial=true;pseudo=true NZ_NPOH01000039.1 Protein Homology CDS 6077 6151 . - 0 ID=cds-CCO46_RS25135;Parent=gene-CCO46_RS25135;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6151,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=CCO46_RS25135;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_NPOH01000004.1 1 295855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000004.1 RefSeq region 1 295855 . + . ID=NZ_NPOH01000004.1:1..295855;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000004.1 RefSeq gene 165 845 . - . ID=gene-CCO46_RS05995;Name=CCO46_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS05995;old_locus_tag=CCO46_05995 NZ_NPOH01000004.1 Protein Homology CDS 165 845 . - 0 ID=cds-WP_000106461.1;Parent=gene-CCO46_RS05995;Dbxref=GenBank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=CCO46_RS05995;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 1629 2486 . + . ID=gene-CCO46_RS06005;Name=CCO46_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06005;old_locus_tag=CCO46_06005 NZ_NPOH01000004.1 Protein Homology CDS 1629 2486 . + 0 ID=cds-WP_080160222.1;Parent=gene-CCO46_RS06005;Dbxref=GenBank:WP_080160222.1;Name=WP_080160222.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=CCO46_RS06005;product=winged helix-turn-helix domain-containing protein;protein_id=WP_080160222.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 2497 2961 . + . ID=gene-CCO46_RS06010;Name=CCO46_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06010;old_locus_tag=CCO46_06010 NZ_NPOH01000004.1 Protein Homology CDS 2497 2961 . + 0 ID=cds-WP_001521985.1;Parent=gene-CCO46_RS06010;Dbxref=GenBank:WP_001521985.1;Name=WP_001521985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=CCO46_RS06010;product=hypothetical protein;protein_id=WP_001521985.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 3056 5908 . - . ID=gene-CCO46_RS06015;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=CCO46_RS06015;old_locus_tag=CCO46_06015 NZ_NPOH01000004.1 Protein Homology CDS 3056 5908 . - 0 ID=cds-WP_097363270.1;Parent=gene-CCO46_RS06015;Dbxref=GenBank:WP_097363270.1;Name=WP_097363270.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=CCO46_RS06015;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_097363270.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 5983 6600 . - . ID=gene-CCO46_RS06020;Name=CCO46_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06020;old_locus_tag=CCO46_06020 NZ_NPOH01000004.1 Protein Homology CDS 5983 6600 . - 0 ID=cds-WP_000984808.1;Parent=gene-CCO46_RS06020;Dbxref=GenBank:WP_000984808.1;Name=WP_000984808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=CCO46_RS06020;product=transcriptional regulator;protein_id=WP_000984808.1;transl_table=11 NZ_NPOH01000004.1 RefSeq pseudogene 7356 7466 . - . ID=gene-CCO46_RS25415;Name=CCO46_RS25415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25415;partial=true;pseudo=true;start_range=.,7356 NZ_NPOH01000004.1 Protein Homology CDS 7356 7466 . - 0 ID=cds-CCO46_RS25415;Parent=gene-CCO46_RS25415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=CCO46_RS25415;partial=true;product=transposase;pseudo=true;start_range=.,7356;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 7696 8421 . - . ID=gene-CCO46_RS06025;Name=CCO46_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06025;old_locus_tag=CCO46_06025 NZ_NPOH01000004.1 Protein Homology CDS 7696 8421 . - 0 ID=cds-WP_097363271.1;Parent=gene-CCO46_RS06025;Dbxref=GenBank:WP_097363271.1;Name=WP_097363271.1;Ontology_term=GO:0051607;gbkey=CDS;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521981.1;locus_tag=CCO46_RS06025;product=retron system putative HNH endonuclease;protein_id=WP_097363271.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 8418 8627 . - . ID=gene-CCO46_RS06030;Name=CCO46_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06030;old_locus_tag=CCO46_06030 NZ_NPOH01000004.1 GeneMarkS-2+ CDS 8418 8627 . - 0 ID=cds-WP_125011023.1;Parent=gene-CCO46_RS06030;Dbxref=GenBank:WP_125011023.1;Name=WP_125011023.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS06030;product=hypothetical protein;protein_id=WP_125011023.1;transl_table=11 NZ_NPOH01000004.1 RefSeq pseudogene 8624 9815 . - . ID=gene-CCO46_RS06035;Name=CCO46_RS06035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS06035;old_locus_tag=CCO46_06035;pseudo=true NZ_NPOH01000004.1 Protein Homology CDS 8624 9815 . - 0 ID=cds-CCO46_RS06035;Parent=gene-CCO46_RS06035;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462652.1;locus_tag=CCO46_RS06035;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 9950 10117 . - . ID=gene-CCO46_RS25720;Name=CCO46_RS25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25720;old_locus_tag=CCO46_06040 NZ_NPOH01000004.1 Protein Homology CDS 9950 10117 . - 0 ID=cds-WP_223228506.1;Parent=gene-CCO46_RS25720;Dbxref=GenBank:WP_223228506.1;Name=WP_223228506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018465.6;locus_tag=CCO46_RS25720;product=TA system toxin CbtA family protein;protein_id=WP_223228506.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 10489 10833 . + . ID=gene-CCO46_RS06045;Name=CCO46_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06045;old_locus_tag=CCO46_06045 NZ_NPOH01000004.1 Protein Homology CDS 10489 10833 . + 0 ID=cds-WP_000120778.1;Parent=gene-CCO46_RS06045;Dbxref=GenBank:WP_000120778.1;Name=WP_000120778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=CCO46_RS06045;product=hypothetical protein;protein_id=WP_000120778.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 11150 11244 . - . ID=gene-CCO46_RS06050;Name=CCO46_RS06050;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS06050;old_locus_tag=CCO46_06050 NZ_NPOH01000004.1 tRNAscan-SE tRNA 11150 11244 . - . ID=rna-CCO46_RS06050;Parent=gene-CCO46_RS06050;anticodon=(pos:complement(11208..11210));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS06050;product=tRNA-Sec NZ_NPOH01000004.1 tRNAscan-SE exon 11150 11244 . - . ID=exon-CCO46_RS06050-1;Parent=rna-CCO46_RS06050;anticodon=(pos:complement(11208..11210));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS06050;product=tRNA-Sec NZ_NPOH01000004.1 RefSeq pseudogene 11532 12918 . + . ID=gene-CCO46_RS06055;Name=CCO46_RS06055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS06055;old_locus_tag=CCO46_06055;pseudo=true NZ_NPOH01000004.1 Protein Homology CDS 11532 12918 . + 0 ID=cds-CCO46_RS06055;Parent=gene-CCO46_RS06055;Note=frameshifted;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=CCO46_RS06055;product=glycoside-pentoside-hexuronide family transporter;pseudo=true;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 12930 15248 . + . ID=gene-CCO46_RS06060;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=CCO46_RS06060;old_locus_tag=CCO46_06060 NZ_NPOH01000004.1 Protein Homology CDS 12930 15248 . + 0 ID=cds-WP_094887764.1;Parent=gene-CCO46_RS06060;Dbxref=GenBank:WP_094887764.1;Name=WP_094887764.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=CCO46_RS06060;product=alpha-xylosidase;protein_id=WP_094887764.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 15351 17060 . - . ID=gene-CCO46_RS06065;Name=CCO46_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06065;old_locus_tag=CCO46_06065 NZ_NPOH01000004.1 Protein Homology CDS 15351 17060 . - 0 ID=cds-WP_000766654.1;Parent=gene-CCO46_RS06065;Dbxref=GenBank:WP_000766654.1;Name=WP_000766654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=CCO46_RS06065;product=AsmA family protein;protein_id=WP_000766654.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 17181 18572 . - . ID=gene-CCO46_RS06070;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=CCO46_RS06070;old_locus_tag=CCO46_06070 NZ_NPOH01000004.1 Protein Homology CDS 17181 18572 . - 0 ID=cds-WP_000115428.1;Parent=gene-CCO46_RS06070;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=CCO46_RS06070;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 18800 20005 . + . ID=gene-CCO46_RS06075;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CCO46_RS06075;old_locus_tag=CCO46_06075 NZ_NPOH01000004.1 Protein Homology CDS 18800 20005 . + 0 ID=cds-WP_000462251.1;Parent=gene-CCO46_RS06075;Dbxref=GenBank:WP_000462251.1;Name=WP_000462251.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462646.1;locus_tag=CCO46_RS06075;product=sodium/glutamate symporter;protein_id=WP_000462251.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 20008 20859 . + . ID=gene-CCO46_RS06080;Name=CCO46_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06080;old_locus_tag=CCO46_06080 NZ_NPOH01000004.1 Protein Homology CDS 20008 20859 . + 0 ID=cds-WP_000745469.1;Parent=gene-CCO46_RS06080;Dbxref=GenBank:WP_000745469.1;Name=WP_000745469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462645.1;locus_tag=CCO46_RS06080;product=hypothetical protein;protein_id=WP_000745469.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 20862 22943 . - . ID=gene-CCO46_RS06085;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CCO46_RS06085;old_locus_tag=CCO46_06085 NZ_NPOH01000004.1 Protein Homology CDS 20862 22943 . - 0 ID=cds-WP_094882280.1;Parent=gene-CCO46_RS06085;Dbxref=GenBank:WP_094882280.1;Name=WP_094882280.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=CCO46_RS06085;product=ATP-dependent DNA helicase RecG;protein_id=WP_094882280.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 22949 23638 . - . ID=gene-CCO46_RS06090;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=CCO46_RS06090;old_locus_tag=CCO46_06090 NZ_NPOH01000004.1 Protein Homology CDS 22949 23638 . - 0 ID=cds-WP_001068436.1;Parent=gene-CCO46_RS06090;Dbxref=GenBank:WP_001068436.1;Name=WP_001068436.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=CCO46_RS06090;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068436.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 23643 25754 . - . ID=gene-CCO46_RS06095;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=CCO46_RS06095;old_locus_tag=CCO46_06095 NZ_NPOH01000004.1 Protein Homology CDS 23643 25754 . - 0 ID=cds-WP_000280481.1;Parent=gene-CCO46_RS06095;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=CCO46_RS06095;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 25773 26048 . - . ID=gene-CCO46_RS06100;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CCO46_RS06100;old_locus_tag=CCO46_06100 NZ_NPOH01000004.1 Protein Homology CDS 25773 26048 . - 0 ID=cds-WP_000135058.1;Parent=gene-CCO46_RS06100;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=CCO46_RS06100;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 26103 26726 . - . ID=gene-CCO46_RS06105;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CCO46_RS06105;old_locus_tag=CCO46_06105 NZ_NPOH01000004.1 Protein Homology CDS 26103 26726 . - 0 ID=cds-WP_000046966.1;Parent=gene-CCO46_RS06105;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=CCO46_RS06105;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 26983 28668 . + . ID=gene-CCO46_RS06110;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=CCO46_RS06110;old_locus_tag=CCO46_06110 NZ_NPOH01000004.1 Protein Homology CDS 26983 28668 . + 0 ID=cds-WP_097363272.1;Parent=gene-CCO46_RS06110;Dbxref=GenBank:WP_097363272.1;Name=WP_097363272.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=CCO46_RS06110;product=NAD-dependent DNA ligase LigB;protein_id=WP_097363272.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 28665 29282 . - . ID=gene-CCO46_RS06115;Name=CCO46_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06115;old_locus_tag=CCO46_06115 NZ_NPOH01000004.1 Protein Homology CDS 28665 29282 . - 0 ID=cds-WP_000924334.1;Parent=gene-CCO46_RS06115;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=CCO46_RS06115;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 29533 30414 . - . ID=gene-CCO46_RS06120;Name=CCO46_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06120;old_locus_tag=CCO46_06120 NZ_NPOH01000004.1 Protein Homology CDS 29533 30414 . - 0 ID=cds-WP_001082959.1;Parent=gene-CCO46_RS06120;Dbxref=GenBank:WP_001082959.1;Name=WP_001082959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=CCO46_RS06120;product=HARLDQ motif MBL-fold protein;protein_id=WP_001082959.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 30488 31390 . + . ID=gene-CCO46_RS06125;Name=CCO46_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06125;old_locus_tag=CCO46_06125 NZ_NPOH01000004.1 Protein Homology CDS 30488 31390 . + 0 ID=cds-WP_001050867.1;Parent=gene-CCO46_RS06125;Dbxref=GenBank:WP_001050867.1;Name=WP_001050867.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=CCO46_RS06125;product=LysR family transcriptional regulator;protein_id=WP_001050867.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 31440 32303 . - . ID=gene-CCO46_RS06130;Name=CCO46_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06130;old_locus_tag=CCO46_06130 NZ_NPOH01000004.1 Protein Homology CDS 31440 32303 . - 0 ID=cds-WP_000621353.1;Parent=gene-CCO46_RS06130;Dbxref=GenBank:WP_000621353.1;Name=WP_000621353.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=CCO46_RS06130;product=YicC/YloC family endoribonuclease;protein_id=WP_000621353.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 32429 33145 . + . ID=gene-CCO46_RS06140;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=CCO46_RS06140;old_locus_tag=CCO46_06140 NZ_NPOH01000004.1 Protein Homology CDS 32429 33145 . + 0 ID=cds-WP_001247078.1;Parent=gene-CCO46_RS06140;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=CCO46_RS06140;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 33224 33865 . + . ID=gene-CCO46_RS06145;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CCO46_RS06145;old_locus_tag=CCO46_06145 NZ_NPOH01000004.1 Protein Homology CDS 33224 33865 . + 0 ID=cds-WP_039519809.1;Parent=gene-CCO46_RS06145;Dbxref=GenBank:WP_039519809.1;Name=WP_039519809.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=CCO46_RS06145;product=orotate phosphoribosyltransferase;protein_id=WP_039519809.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 33943 34539 . - . ID=gene-CCO46_RS06150;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=CCO46_RS06150;old_locus_tag=CCO46_06150 NZ_NPOH01000004.1 Protein Homology CDS 33943 34539 . - 0 ID=cds-WP_000818607.1;Parent=gene-CCO46_RS06150;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=CCO46_RS06150;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 34647 35105 . - . ID=gene-CCO46_RS06155;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=CCO46_RS06155;old_locus_tag=CCO46_06155 NZ_NPOH01000004.1 Protein Homology CDS 34647 35105 . - 0 ID=cds-WP_000976078.1;Parent=gene-CCO46_RS06155;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=CCO46_RS06155;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 35083 36303 . - . ID=gene-CCO46_RS06160;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CCO46_RS06160;old_locus_tag=CCO46_06160 NZ_NPOH01000004.1 Protein Homology CDS 35083 36303 . - 0 ID=cds-WP_000050176.1;Parent=gene-CCO46_RS06160;Dbxref=GenBank:WP_000050176.1;Name=WP_000050176.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=CCO46_RS06160;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050176.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 36479 37144 . + . ID=gene-CCO46_RS06165;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CCO46_RS06165;old_locus_tag=CCO46_06165 NZ_NPOH01000004.1 Protein Homology CDS 36479 37144 . + 0 ID=cds-WP_000380129.1;Parent=gene-CCO46_RS06165;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=CCO46_RS06165;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 37362 37598 . + . ID=gene-CCO46_RS06170;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CCO46_RS06170;old_locus_tag=CCO46_06170 NZ_NPOH01000004.1 Protein Homology CDS 37362 37598 . + 0 ID=cds-WP_001519051.1;Parent=gene-CCO46_RS06170;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=CCO46_RS06170;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 37619 37786 . + . ID=gene-CCO46_RS06175;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CCO46_RS06175;old_locus_tag=CCO46_06175 NZ_NPOH01000004.1 Protein Homology CDS 37619 37786 . + 0 ID=cds-WP_001051798.1;Parent=gene-CCO46_RS06175;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=CCO46_RS06175;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 37884 38693 . + . ID=gene-CCO46_RS06180;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CCO46_RS06180;old_locus_tag=CCO46_06180 NZ_NPOH01000004.1 Protein Homology CDS 37884 38693 . + 0 ID=cds-WP_001114515.1;Parent=gene-CCO46_RS06180;Dbxref=GenBank:WP_001114515.1;Name=WP_001114515.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=CCO46_RS06180;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114515.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 38721 39200 . - . ID=gene-CCO46_RS06185;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CCO46_RS06185;old_locus_tag=CCO46_06185 NZ_NPOH01000004.1 Protein Homology CDS 38721 39200 . - 0 ID=cds-WP_001171884.1;Parent=gene-CCO46_RS06185;Dbxref=GenBank:WP_001171884.1;Name=WP_001171884.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=CCO46_RS06185;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171884.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 39209 40486 . - . ID=gene-CCO46_RS06190;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=CCO46_RS06190;old_locus_tag=CCO46_06190 NZ_NPOH01000004.1 Protein Homology CDS 39209 40486 . - 0 ID=cds-WP_097363273.1;Parent=gene-CCO46_RS06190;Dbxref=GenBank:WP_097363273.1;Name=WP_097363273.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=CCO46_RS06190;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_097363273.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 40895 41965 . + . ID=gene-CCO46_RS06195;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=CCO46_RS06195;old_locus_tag=CCO46_06195 NZ_NPOH01000004.1 Protein Homology CDS 40895 41965 . + 0 ID=cds-WP_001526672.1;Parent=gene-CCO46_RS06195;Dbxref=GenBank:WP_001526672.1;Name=WP_001526672.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=CCO46_RS06195;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001526672.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 41962 43086 . + . ID=gene-CCO46_RS06200;Name=CCO46_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06200;old_locus_tag=CCO46_06200 NZ_NPOH01000004.1 Protein Homology CDS 41962 43086 . + 0 ID=cds-WP_080207943.1;Parent=gene-CCO46_RS06200;Dbxref=GenBank:WP_080207943.1;Name=WP_080207943.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=CCO46_RS06200;product=glycosyltransferase family 4 protein;protein_id=WP_080207943.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 43079 43876 . + . ID=gene-CCO46_RS06205;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=CCO46_RS06205;old_locus_tag=CCO46_06205 NZ_NPOH01000004.1 Protein Homology CDS 43079 43876 . + 0 ID=cds-WP_000229830.1;Parent=gene-CCO46_RS06205;Dbxref=GenBank:WP_000229830.1;Name=WP_000229830.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=CCO46_RS06205;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229830.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 43982 44854 . + . ID=gene-CCO46_RS06210;Name=CCO46_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06210;old_locus_tag=CCO46_06210 NZ_NPOH01000004.1 Protein Homology CDS 43982 44854 . + 0 ID=cds-WP_227490999.1;Parent=gene-CCO46_RS06210;Dbxref=GenBank:WP_227490999.1;Name=WP_227490999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280506.1;locus_tag=CCO46_RS06210;product=glycosyltransferase family 52;protein_id=WP_227490999.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 44940 46019 . + . ID=gene-CCO46_RS06215;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=CCO46_RS06215;old_locus_tag=CCO46_06215 NZ_NPOH01000004.1 Protein Homology CDS 44940 46019 . + 0 ID=cds-WP_023201726.1;Parent=gene-CCO46_RS06215;Dbxref=GenBank:WP_023201726.1;Name=WP_023201726.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=CCO46_RS06215;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_023201726.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 46025 47038 . + . ID=gene-CCO46_RS06220;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=CCO46_RS06220;old_locus_tag=CCO46_06220 NZ_NPOH01000004.1 Protein Homology CDS 46025 47038 . + 0 ID=cds-WP_000088489.1;Parent=gene-CCO46_RS06220;Dbxref=GenBank:WP_000088489.1;Name=WP_000088489.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=CCO46_RS06220;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088489.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 47056 48066 . + . ID=gene-CCO46_RS06225;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=CCO46_RS06225;old_locus_tag=CCO46_06225 NZ_NPOH01000004.1 Protein Homology CDS 47056 48066 . + 0 ID=cds-WP_000376860.1;Parent=gene-CCO46_RS06225;Dbxref=GenBank:WP_000376860.1;Name=WP_000376860.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=CCO46_RS06225;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_000376860.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 48089 48787 . + . ID=gene-CCO46_RS06230;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=CCO46_RS06230;old_locus_tag=CCO46_06230 NZ_NPOH01000004.1 Protein Homology CDS 48089 48787 . + 0 ID=cds-WP_000582812.1;Parent=gene-CCO46_RS06230;Dbxref=GenBank:WP_000582812.1;Name=WP_000582812.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=CCO46_RS06230;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582812.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 48937 49746 . + . ID=gene-CCO46_RS06235;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=CCO46_RS06235;old_locus_tag=CCO46_06235 NZ_NPOH01000004.1 Protein Homology CDS 48937 49746 . + 0 ID=cds-WP_000536020.1;Parent=gene-CCO46_RS06235;Dbxref=GenBank:WP_000536020.1;Name=WP_000536020.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=CCO46_RS06235;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536020.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 49846 50991 . + . ID=gene-CCO46_RS06240;Name=CCO46_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06240;old_locus_tag=CCO46_06240 NZ_NPOH01000004.1 Protein Homology CDS 49846 50991 . + 0 ID=cds-WP_000591835.1;Parent=gene-CCO46_RS06240;Dbxref=GenBank:WP_000591835.1;Name=WP_000591835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=CCO46_RS06240;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591835.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 51048 52262 . - . ID=gene-CCO46_RS06245;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=CCO46_RS06245;old_locus_tag=CCO46_06245 NZ_NPOH01000004.1 Protein Homology CDS 51048 52262 . - 0 ID=cds-WP_000958440.1;Parent=gene-CCO46_RS06245;Dbxref=GenBank:WP_000958440.1;Name=WP_000958440.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=CCO46_RS06245;product=O-antigen ligase RfaL;protein_id=WP_000958440.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 52302 53255 . - . ID=gene-CCO46_RS06250;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=CCO46_RS06250;old_locus_tag=CCO46_06250 NZ_NPOH01000004.1 Protein Homology CDS 52302 53255 . - 0 ID=cds-WP_001264622.1;Parent=gene-CCO46_RS06250;Dbxref=GenBank:WP_001264622.1;Name=WP_001264622.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=CCO46_RS06250;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264622.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 53255 54301 . - . ID=gene-CCO46_RS06255;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=CCO46_RS06255;old_locus_tag=CCO46_06255 NZ_NPOH01000004.1 Protein Homology CDS 53255 54301 . - 0 ID=cds-WP_000699196.1;Parent=gene-CCO46_RS06255;Dbxref=GenBank:WP_000699196.1;Name=WP_000699196.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=CCO46_RS06255;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699196.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 54304 55236 . - . ID=gene-CCO46_RS06260;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=CCO46_RS06260;old_locus_tag=CCO46_06260 NZ_NPOH01000004.1 Protein Homology CDS 54304 55236 . - 0 ID=cds-WP_080160215.1;Parent=gene-CCO46_RS06260;Dbxref=GenBank:WP_080160215.1;Name=WP_080160215.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=CCO46_RS06260;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_080160215.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 55439 56635 . + . ID=gene-CCO46_RS06265;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=CCO46_RS06265;old_locus_tag=CCO46_06265 NZ_NPOH01000004.1 Protein Homology CDS 55439 56635 . + 0 ID=cds-WP_024797497.1;Parent=gene-CCO46_RS06265;Dbxref=GenBank:WP_024797497.1;Name=WP_024797497.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=CCO46_RS06265;product=glycine C-acetyltransferase;protein_id=WP_024797497.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 56645 57670 . + . ID=gene-CCO46_RS06270;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=CCO46_RS06270;old_locus_tag=CCO46_06270 NZ_NPOH01000004.1 Protein Homology CDS 56645 57670 . + 0 ID=cds-WP_000645990.1;Parent=gene-CCO46_RS06270;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=CCO46_RS06270;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 58165 59199 . + . ID=gene-CCO46_RS06280;Name=CCO46_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06280;old_locus_tag=CCO46_06280 NZ_NPOH01000004.1 Protein Homology CDS 58165 59199 . + 0 ID=cds-WP_000798200.1;Parent=gene-CCO46_RS06280;Dbxref=GenBank:WP_000798200.1;Name=WP_000798200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=CCO46_RS06280;product=glycosyltransferase;protein_id=WP_000798200.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 59186 60148 . - . ID=gene-CCO46_RS06285;Name=CCO46_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06285;old_locus_tag=CCO46_06285 NZ_NPOH01000004.1 Protein Homology CDS 59186 60148 . - 0 ID=cds-WP_001135513.1;Parent=gene-CCO46_RS06285;Dbxref=GenBank:WP_001135513.1;Name=WP_001135513.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=CCO46_RS06285;product=divergent polysaccharide deacetylase family protein;protein_id=WP_001135513.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 60152 61411 . - . ID=gene-CCO46_RS06290;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=CCO46_RS06290;old_locus_tag=CCO46_06290 NZ_NPOH01000004.1 Protein Homology CDS 60152 61411 . - 0 ID=cds-WP_058814511.1;Parent=gene-CCO46_RS06290;Dbxref=GenBank:WP_058814511.1;Name=WP_058814511.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=CCO46_RS06290;product=murein hydrolase activator EnvC;protein_id=WP_058814511.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 61445 62989 . - . ID=gene-CCO46_RS06295;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=CCO46_RS06295;old_locus_tag=CCO46_06295 NZ_NPOH01000004.1 Protein Homology CDS 61445 62989 . - 0 ID=cds-WP_000116576.1;Parent=gene-CCO46_RS06295;Dbxref=GenBank:WP_000116576.1;Name=WP_000116576.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=CCO46_RS06295;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116576.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 63237 63668 . + . ID=gene-CCO46_RS06300;Name=CCO46_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06300;old_locus_tag=CCO46_06300 NZ_NPOH01000004.1 Protein Homology CDS 63237 63668 . + 0 ID=cds-WP_001156179.1;Parent=gene-CCO46_RS06300;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=CCO46_RS06300;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 63754 64005 . + . ID=gene-CCO46_RS06305;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=CCO46_RS06305;old_locus_tag=CCO46_06305 NZ_NPOH01000004.1 Protein Homology CDS 63754 64005 . + 0 ID=cds-WP_001273795.1;Parent=gene-CCO46_RS06305;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=CCO46_RS06305;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 64049 64516 . + . ID=gene-CCO46_RS06310;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=CCO46_RS06310;old_locus_tag=CCO46_06310 NZ_NPOH01000004.1 Protein Homology CDS 64049 64516 . + 0 ID=cds-WP_000003370.1;Parent=gene-CCO46_RS06310;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=CCO46_RS06310;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 64516 65535 . + . ID=gene-CCO46_RS06315;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=CCO46_RS06315;old_locus_tag=CCO46_06315 NZ_NPOH01000004.1 Protein Homology CDS 64516 65535 . + 0 ID=cds-WP_001076596.1;Parent=gene-CCO46_RS06315;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=CCO46_RS06315;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 65613 66434 . + . ID=gene-CCO46_RS06320;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CCO46_RS06320;old_locus_tag=CCO46_06320 NZ_NPOH01000004.1 Protein Homology CDS 65613 66434 . + 0 ID=cds-WP_001112114.1;Parent=gene-CCO46_RS06320;Dbxref=GenBank:WP_001112114.1;Name=WP_001112114.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=CCO46_RS06320;product=serine O-acetyltransferase;protein_id=WP_001112114.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 66517 67827 . - . ID=gene-CCO46_RS06325;Name=CCO46_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06325;old_locus_tag=CCO46_06325 NZ_NPOH01000004.1 Protein Homology CDS 66517 67827 . - 0 ID=cds-WP_058331584.1;Parent=gene-CCO46_RS06325;Dbxref=GenBank:WP_058331584.1;Name=WP_058331584.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=CCO46_RS06325;product=MFS transporter;protein_id=WP_058331584.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 67901 69097 . - . ID=gene-CCO46_RS06330;Name=CCO46_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06330;old_locus_tag=CCO46_06330 NZ_NPOH01000004.1 Protein Homology CDS 67901 69097 . - 0 ID=cds-WP_001218249.1;Parent=gene-CCO46_RS06330;Dbxref=GenBank:WP_001218249.1;Name=WP_001218249.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=CCO46_RS06330;product=L-talarate/galactarate dehydratase;protein_id=WP_001218249.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 69416 70420 . + . ID=gene-CCO46_RS06340;Name=CCO46_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06340;old_locus_tag=CCO46_06340 NZ_NPOH01000004.1 Protein Homology CDS 69416 70420 . + 0 ID=cds-WP_001537635.1;Parent=gene-CCO46_RS06340;Dbxref=GenBank:WP_001537635.1;Name=WP_001537635.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=CCO46_RS06340;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001537635.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 70488 70961 . - . ID=gene-CCO46_RS06345;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CCO46_RS06345;old_locus_tag=CCO46_06345 NZ_NPOH01000004.1 Protein Homology CDS 70488 70961 . - 0 ID=cds-WP_000932335.1;Parent=gene-CCO46_RS06345;Dbxref=GenBank:WP_000932335.1;Name=WP_000932335.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=CCO46_RS06345;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932335.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 71026 72216 . - . ID=gene-CCO46_RS06350;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=CCO46_RS06350;old_locus_tag=CCO46_06350 NZ_NPOH01000004.1 Protein Homology CDS 71026 72216 . - 0 ID=cds-WP_000586988.1;Parent=gene-CCO46_RS06350;Dbxref=GenBank:WP_000586988.1;Name=WP_000586988.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=CCO46_RS06350;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586988.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 72213 72989 . - . ID=gene-CCO46_RS06355;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=CCO46_RS06355;old_locus_tag=CCO46_06355 NZ_NPOH01000004.1 Protein Homology CDS 72213 72989 . - 0 ID=cds-WP_000636696.1;Parent=gene-CCO46_RS06355;Dbxref=GenBank:WP_000636696.1;Name=WP_000636696.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=CCO46_RS06355;product=transcriptional regulator LldR;protein_id=WP_000636696.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 72986 74641 . - . ID=gene-CCO46_RS06360;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=CCO46_RS06360;old_locus_tag=CCO46_06360 NZ_NPOH01000004.1 Protein Homology CDS 72986 74641 . - 0 ID=cds-WP_023241119.1;Parent=gene-CCO46_RS06360;Dbxref=GenBank:WP_023241119.1;Name=WP_023241119.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=CCO46_RS06360;product=L-lactate permease;protein_id=WP_023241119.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 74915 75277 . - . ID=gene-CCO46_RS06365;Name=CCO46_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06365;old_locus_tag=CCO46_06365 NZ_NPOH01000004.1 Protein Homology CDS 74915 75277 . - 0 ID=cds-WP_000665688.1;Parent=gene-CCO46_RS06365;Dbxref=GenBank:WP_000665688.1;Name=WP_000665688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=CCO46_RS06365;product=YibL family ribosome-associated protein;protein_id=WP_000665688.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 75568 75777 . + . ID=gene-CCO46_RS06370;Name=CCO46_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06370;old_locus_tag=CCO46_06370 NZ_NPOH01000004.1 Protein Homology CDS 75568 75777 . + 0 ID=cds-WP_001062558.1;Parent=gene-CCO46_RS06370;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=CCO46_RS06370;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 75787 76377 . - . ID=gene-CCO46_RS06375;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=CCO46_RS06375;old_locus_tag=CCO46_06375 NZ_NPOH01000004.1 Protein Homology CDS 75787 76377 . - 0 ID=cds-WP_000193201.1;Parent=gene-CCO46_RS06375;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=CCO46_RS06375;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 76374 77522 . - . ID=gene-CCO46_RS06380;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=CCO46_RS06380;old_locus_tag=CCO46_06380 NZ_NPOH01000004.1 Protein Homology CDS 76374 77522 . - 0 ID=cds-WP_023196722.1;Parent=gene-CCO46_RS06380;Dbxref=GenBank:WP_023196722.1;Name=WP_023196722.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=CCO46_RS06380;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_023196722.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 77753 79669 . - . ID=gene-CCO46_RS06385;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=CCO46_RS06385;old_locus_tag=CCO46_06385 NZ_NPOH01000004.1 Protein Homology CDS 77753 79669 . - 0 ID=cds-WP_000093287.1;Parent=gene-CCO46_RS06385;Dbxref=GenBank:WP_000093287.1;Name=WP_000093287.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=CCO46_RS06385;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093287.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 80203 80565 . + . ID=gene-CCO46_RS06395;Name=CCO46_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06395;old_locus_tag=CCO46_06395 NZ_NPOH01000004.1 Protein Homology CDS 80203 80565 . + 0 ID=cds-WP_000479642.1;Parent=gene-CCO46_RS06395;Dbxref=GenBank:WP_000479642.1;Name=WP_000479642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=CCO46_RS06395;product=DUF3302 domain-containing protein;protein_id=WP_000479642.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 80568 81704 . + . ID=gene-CCO46_RS06400;Name=CCO46_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06400;old_locus_tag=CCO46_06400 NZ_NPOH01000004.1 Protein Homology CDS 80568 81704 . + 0 ID=cds-WP_000364909.1;Parent=gene-CCO46_RS06400;Dbxref=GenBank:WP_000364909.1;Name=WP_000364909.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=CCO46_RS06400;product=HlyD family secretion protein;protein_id=WP_000364909.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 81802 82410 . + . ID=gene-CCO46_RS06405;Name=CCO46_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06405;old_locus_tag=CCO46_06405 NZ_NPOH01000004.1 Protein Homology CDS 81802 82410 . + 0 ID=cds-WP_000766677.1;Parent=gene-CCO46_RS06405;Dbxref=GenBank:WP_000766677.1;Name=WP_000766677.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=CCO46_RS06405;product=glutathione S-transferase;protein_id=WP_000766677.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 82509 83900 . + . ID=gene-CCO46_RS06410;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=CCO46_RS06410;old_locus_tag=CCO46_06410 NZ_NPOH01000004.1 Protein Homology CDS 82509 83900 . + 0 ID=cds-WP_080160213.1;Parent=gene-CCO46_RS06410;Dbxref=GenBank:WP_080160213.1;Name=WP_080160213.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=CCO46_RS06410;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_080160213.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 83897 85747 . + . ID=gene-CCO46_RS06415;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=CCO46_RS06415;old_locus_tag=CCO46_06415 NZ_NPOH01000004.1 Protein Homology CDS 83897 85747 . + 0 ID=cds-WP_097363274.1;Parent=gene-CCO46_RS06415;Dbxref=GenBank:WP_097363274.1;Name=WP_097363274.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=CCO46_RS06415;product=selenocysteine-specific translation elongation factor;protein_id=WP_097363274.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 85995 86876 . - . ID=gene-CCO46_RS06420;Name=CCO46_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06420;old_locus_tag=CCO46_06420 NZ_NPOH01000004.1 Protein Homology CDS 85995 86876 . - 0 ID=cds-WP_001188282.1;Parent=gene-CCO46_RS06420;Dbxref=GenBank:WP_001188282.1;Name=WP_001188282.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=CCO46_RS06420;product=ROK family protein;protein_id=WP_001188282.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 87045 88583 . + . ID=gene-CCO46_RS06425;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=CCO46_RS06425;old_locus_tag=CCO46_06425 NZ_NPOH01000004.1 Protein Homology CDS 87045 88583 . + 0 ID=cds-WP_000183988.1;Parent=gene-CCO46_RS06425;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=CCO46_RS06425;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 88869 90824 . - . ID=gene-CCO46_RS06435;Name=CCO46_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06435;old_locus_tag=CCO46_06435 NZ_NPOH01000004.1 Protein Homology CDS 88869 90824 . - 0 ID=cds-WP_097363275.1;Parent=gene-CCO46_RS06435;Dbxref=GenBank:WP_097363275.1;Name=WP_097363275.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=CCO46_RS06435;product=glycoside hydrolase family 127 protein;protein_id=WP_097363275.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 91088 91903 . + . ID=gene-CCO46_RS06440;Name=CCO46_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06440;old_locus_tag=CCO46_06440 NZ_NPOH01000004.1 Protein Homology CDS 91088 91903 . + 0 ID=cds-WP_000891808.1;Parent=gene-CCO46_RS06440;Dbxref=GenBank:WP_000891808.1;Name=WP_000891808.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=CCO46_RS06440;product=AraC family transcriptional regulator;protein_id=WP_000891808.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 92064 92759 . - . ID=gene-CCO46_RS06445;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO46_RS06445;old_locus_tag=CCO46_06445 NZ_NPOH01000004.1 Protein Homology CDS 92064 92759 . - 0 ID=cds-WP_000893174.1;Parent=gene-CCO46_RS06445;Dbxref=GenBank:WP_000893174.1;Name=WP_000893174.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=CCO46_RS06445;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893174.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 92753 93613 . - . ID=gene-CCO46_RS06450;Name=CCO46_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06450;old_locus_tag=CCO46_06450 NZ_NPOH01000004.1 Protein Homology CDS 92753 93613 . - 0 ID=cds-WP_001244041.1;Parent=gene-CCO46_RS06450;Dbxref=GenBank:WP_001244041.1;Name=WP_001244041.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=CCO46_RS06450;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001244041.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 93606 94268 . - . ID=gene-CCO46_RS06455;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO46_RS06455;old_locus_tag=CCO46_06455 NZ_NPOH01000004.1 Protein Homology CDS 93606 94268 . - 0 ID=cds-WP_000089522.1;Parent=gene-CCO46_RS06455;Dbxref=GenBank:WP_000089522.1;Name=WP_000089522.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=CCO46_RS06455;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089522.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 94265 95761 . - . ID=gene-CCO46_RS06460;Name=CCO46_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06460;old_locus_tag=CCO46_06460 NZ_NPOH01000004.1 Protein Homology CDS 94265 95761 . - 0 ID=cds-WP_094964403.1;Parent=gene-CCO46_RS06460;Dbxref=GenBank:WP_094964403.1;Name=WP_094964403.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=CCO46_RS06460;product=FGGY-family carbohydrate kinase;protein_id=WP_094964403.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 95765 96751 . - . ID=gene-CCO46_RS06465;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=CCO46_RS06465;old_locus_tag=CCO46_06465 NZ_NPOH01000004.1 Protein Homology CDS 95765 96751 . - 0 ID=cds-WP_000766341.1;Parent=gene-CCO46_RS06465;Dbxref=GenBank:WP_000766341.1;Name=WP_000766341.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=CCO46_RS06465;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766341.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 96763 98040 . - . ID=gene-CCO46_RS06470;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=CCO46_RS06470;old_locus_tag=CCO46_06470 NZ_NPOH01000004.1 Protein Homology CDS 96763 98040 . - 0 ID=cds-WP_000301828.1;Parent=gene-CCO46_RS06470;Dbxref=GenBank:WP_000301828.1;Name=WP_000301828.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=CCO46_RS06470;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301828.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 98043 98516 . - . ID=gene-CCO46_RS06475;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=CCO46_RS06475;old_locus_tag=CCO46_06475 NZ_NPOH01000004.1 Protein Homology CDS 98043 98516 . - 0 ID=cds-WP_000832315.1;Parent=gene-CCO46_RS06475;Dbxref=GenBank:WP_000832315.1;Name=WP_000832315.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=CCO46_RS06475;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832315.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 98655 99587 . - . ID=gene-CCO46_RS06480;Name=CCO46_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06480;old_locus_tag=CCO46_06480 NZ_NPOH01000004.1 Protein Homology CDS 98655 99587 . - 0 ID=cds-WP_094964402.1;Parent=gene-CCO46_RS06480;Dbxref=GenBank:WP_094964402.1;Name=WP_094964402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794982.1;locus_tag=CCO46_RS06480;product=DUF4862 family protein;protein_id=WP_094964402.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 99611 100075 . - . ID=gene-CCO46_RS06485;Name=CCO46_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06485;old_locus_tag=CCO46_06485 NZ_NPOH01000004.1 Protein Homology CDS 99611 100075 . - 0 ID=cds-WP_000576100.1;Parent=gene-CCO46_RS06485;Dbxref=GenBank:WP_000576100.1;Name=WP_000576100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=CCO46_RS06485;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576100.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 100087 101085 . - . ID=gene-CCO46_RS06490;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=CCO46_RS06490;old_locus_tag=CCO46_06490 NZ_NPOH01000004.1 Protein Homology CDS 100087 101085 . - 0 ID=cds-WP_000869012.1;Parent=gene-CCO46_RS06490;Dbxref=GenBank:WP_000869012.1;Name=WP_000869012.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=CCO46_RS06490;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869012.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 101315 102115 . + . ID=gene-CCO46_RS06495;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=CCO46_RS06495;old_locus_tag=CCO46_06495 NZ_NPOH01000004.1 Protein Homology CDS 101315 102115 . + 0 ID=cds-WP_000081338.1;Parent=gene-CCO46_RS06495;Dbxref=GenBank:WP_000081338.1;Name=WP_000081338.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=CCO46_RS06495;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081338.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 102232 102705 . + . ID=gene-CCO46_RS06500;Name=CCO46_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06500;old_locus_tag=CCO46_06500 NZ_NPOH01000004.1 Protein Homology CDS 102232 102705 . + 0 ID=cds-WP_001078817.1;Parent=gene-CCO46_RS06500;Dbxref=GenBank:WP_001078817.1;Name=WP_001078817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=CCO46_RS06500;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078817.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 102742 103992 . - . ID=gene-CCO46_RS06505;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=CCO46_RS06505;old_locus_tag=CCO46_06505 NZ_NPOH01000004.1 Protein Homology CDS 102742 103992 . - 0 ID=cds-WP_000144379.1;Parent=gene-CCO46_RS06505;Dbxref=GenBank:WP_000144379.1;Name=WP_000144379.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=CCO46_RS06505;product=valine--pyruvate transaminase;protein_id=WP_000144379.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 104166 106193 . - . ID=gene-CCO46_RS06510;Name=CCO46_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06510;old_locus_tag=CCO46_06510 NZ_NPOH01000004.1 Protein Homology CDS 104166 106193 . - 0 ID=cds-WP_058331579.1;Parent=gene-CCO46_RS06510;Dbxref=GenBank:WP_058331579.1;Name=WP_058331579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=CCO46_RS06510;product=alpha-amylase;protein_id=WP_058331579.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 106509 107333 . + . ID=gene-CCO46_RS06515;Name=CCO46_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06515;old_locus_tag=CCO46_06515 NZ_NPOH01000004.1 Protein Homology CDS 106509 107333 . + 0 ID=cds-WP_024146110.1;Parent=gene-CCO46_RS06515;Dbxref=GenBank:WP_024146110.1;Name=WP_024146110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=CCO46_RS06515;product=protein bax;protein_id=WP_024146110.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 107394 108572 . - . ID=gene-CCO46_RS06520;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=CCO46_RS06520;old_locus_tag=CCO46_06520 NZ_NPOH01000004.1 Protein Homology CDS 107394 108572 . - 0 ID=cds-WP_000459824.1;Parent=gene-CCO46_RS06520;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=CCO46_RS06520;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 108935 110257 . + . ID=gene-CCO46_RS06530;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=CCO46_RS06530;old_locus_tag=CCO46_06530 NZ_NPOH01000004.1 Protein Homology CDS 108935 110257 . + 0 ID=cds-WP_001149561.1;Parent=gene-CCO46_RS06530;Dbxref=GenBank:WP_001149561.1;Name=WP_001149561.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=CCO46_RS06530;product=xylose isomerase;protein_id=WP_001149561.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 110357 111811 . + . ID=gene-CCO46_RS06535;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=CCO46_RS06535;old_locus_tag=CCO46_06535 NZ_NPOH01000004.1 Protein Homology CDS 110357 111811 . + 0 ID=cds-WP_000275322.1;Parent=gene-CCO46_RS06535;Dbxref=GenBank:WP_000275322.1;Name=WP_000275322.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=CCO46_RS06535;product=xylulokinase;protein_id=WP_000275322.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 111986 112339 . + . ID=gene-CCO46_RS06540;Name=CCO46_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06540;old_locus_tag=CCO46_06540 NZ_NPOH01000004.1 Protein Homology CDS 111986 112339 . + 0 ID=cds-WP_000340935.1;Parent=gene-CCO46_RS06540;Dbxref=GenBank:WP_000340935.1;Name=WP_000340935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=CCO46_RS06540;product=YiaA/YiaB family protein;protein_id=WP_000340935.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 112362 113357 . - . ID=gene-CCO46_RS06545;Name=CCO46_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06545;old_locus_tag=CCO46_06545 NZ_NPOH01000004.1 Protein Homology CDS 112362 113357 . - 0 ID=cds-WP_097363276.1;Parent=gene-CCO46_RS06545;Dbxref=GenBank:WP_097363276.1;Name=WP_097363276.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=CCO46_RS06545;product=acyltransferase;protein_id=WP_097363276.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 113523 113825 . + . ID=gene-CCO46_RS06555;Name=CCO46_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06555;old_locus_tag=CCO46_06555 NZ_NPOH01000004.1 Protein Homology CDS 113523 113825 . + 0 ID=cds-WP_000605592.1;Parent=gene-CCO46_RS06555;Dbxref=GenBank:WP_000605592.1;Name=WP_000605592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=CCO46_RS06555;product=YsaB family lipoprotein;protein_id=WP_000605592.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 113964 114875 . + . ID=gene-CCO46_RS06560;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=CCO46_RS06560;old_locus_tag=CCO46_06560 NZ_NPOH01000004.1 Protein Homology CDS 113964 114875 . + 0 ID=cds-WP_001168551.1;Parent=gene-CCO46_RS06560;Dbxref=GenBank:WP_001168551.1;Name=WP_001168551.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=CCO46_RS06560;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168551.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 114885 116954 . + . ID=gene-CCO46_RS06565;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=CCO46_RS06565;old_locus_tag=CCO46_06565 NZ_NPOH01000004.1 Protein Homology CDS 114885 116954 . + 0 ID=cds-WP_023201737.1;Parent=gene-CCO46_RS06565;Dbxref=GenBank:WP_023201737.1;Name=WP_023201737.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=CCO46_RS06565;product=glycine--tRNA ligase subunit beta;protein_id=WP_023201737.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 117823 118242 . + . ID=gene-CCO46_RS06575;Name=CCO46_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06575;old_locus_tag=CCO46_06575 NZ_NPOH01000004.1 Protein Homology CDS 117823 118242 . + 0 ID=cds-WP_001103154.1;Parent=gene-CCO46_RS06575;Dbxref=GenBank:WP_001103154.1;Name=WP_001103154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=CCO46_RS06575;product=DUF4751 family protein;protein_id=WP_001103154.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 118248 118943 . - . ID=gene-CCO46_RS06580;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO46_RS06580;old_locus_tag=CCO46_06580 NZ_NPOH01000004.1 Protein Homology CDS 118248 118943 . - 0 ID=cds-WP_000888683.1;Parent=gene-CCO46_RS06580;Dbxref=GenBank:WP_000888683.1;Name=WP_000888683.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=CCO46_RS06580;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888683.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 119084 120586 . - . ID=gene-CCO46_RS06585;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=CCO46_RS06585;old_locus_tag=CCO46_06585 NZ_NPOH01000004.1 Protein Homology CDS 119084 120586 . - 0 ID=cds-WP_000151693.1;Parent=gene-CCO46_RS06585;Dbxref=GenBank:WP_000151693.1;Name=WP_000151693.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=CCO46_RS06585;product=L-arabinose isomerase;protein_id=WP_000151693.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 120597 122306 . - . ID=gene-CCO46_RS06590;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=CCO46_RS06590;old_locus_tag=CCO46_06590 NZ_NPOH01000004.1 Protein Homology CDS 120597 122306 . - 0 ID=cds-WP_097363277.1;Parent=gene-CCO46_RS06590;Dbxref=GenBank:WP_097363277.1;Name=WP_097363277.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=CCO46_RS06590;product=ribulokinase;protein_id=WP_097363277.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 122647 123492 . + . ID=gene-CCO46_RS06595;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=CCO46_RS06595;old_locus_tag=CCO46_06595 NZ_NPOH01000004.1 Protein Homology CDS 122647 123492 . + 0 ID=cds-WP_000852387.1;Parent=gene-CCO46_RS06595;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=CCO46_RS06595;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 123611 124378 . + . ID=gene-CCO46_RS06600;Name=CCO46_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06600;old_locus_tag=CCO46_06600 NZ_NPOH01000004.1 Protein Homology CDS 123611 124378 . + 0 ID=cds-WP_001148369.1;Parent=gene-CCO46_RS06600;Dbxref=GenBank:WP_001148369.1;Name=WP_001148369.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=CCO46_RS06600;product=DedA family protein;protein_id=WP_001148369.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 124417 125124 . - . ID=gene-CCO46_RS06605;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=CCO46_RS06605;old_locus_tag=CCO46_06605 NZ_NPOH01000004.1 Protein Homology CDS 124417 125124 . - 0 ID=cds-WP_000915973.1;Parent=gene-CCO46_RS06605;Dbxref=GenBank:WP_000915973.1;Name=WP_000915973.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=CCO46_RS06605;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000915973.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 125108 126718 . - . ID=gene-CCO46_RS06610;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=CCO46_RS06610;old_locus_tag=CCO46_06610 NZ_NPOH01000004.1 Protein Homology CDS 125108 126718 . - 0 ID=cds-WP_000235642.1;Parent=gene-CCO46_RS06610;Dbxref=GenBank:WP_000235642.1;Name=WP_000235642.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=CCO46_RS06610;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235642.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 126694 127677 . - . ID=gene-CCO46_RS06615;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=CCO46_RS06615;old_locus_tag=CCO46_06615 NZ_NPOH01000004.1 Protein Homology CDS 126694 127677 . - 0 ID=cds-WP_000915326.1;Parent=gene-CCO46_RS06615;Dbxref=GenBank:WP_000915326.1;Name=WP_000915326.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=CCO46_RS06615;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915326.1;transl_table=11 NZ_NPOH01000004.1 cmsearch riboswitch 127709 127808 . - . ID=id-NZ_NPOH01000004.1:127709..127808;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPOH01000004.1 RefSeq gene 127855 129513 . - . ID=gene-CCO46_RS06620;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=CCO46_RS06620;old_locus_tag=CCO46_06620 NZ_NPOH01000004.1 Protein Homology CDS 127855 129513 . - 0 ID=cds-WP_061372034.1;Parent=gene-CCO46_RS06620;Dbxref=GenBank:WP_061372034.1;Name=WP_061372034.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=CCO46_RS06620;product=HTH-type transcriptional regulator SgrR;protein_id=WP_061372034.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 129606 129728 . + . ID=gene-CCO46_RS06625;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=CCO46_RS06625;old_locus_tag=CCO46_06625 NZ_NPOH01000004.1 Protein Homology CDS 129606 129728 . + 0 ID=cds-WP_001248755.1;Parent=gene-CCO46_RS06625;Dbxref=GenBank:WP_001248755.1;Name=WP_001248755.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=CCO46_RS06625;product=glucose uptake inhibitor SgrT;protein_id=WP_001248755.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 130064 130669 . - . ID=gene-CCO46_RS06630;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CCO46_RS06630;old_locus_tag=CCO46_06630 NZ_NPOH01000004.1 Protein Homology CDS 130064 130669 . - 0 ID=cds-WP_000818267.1;Parent=gene-CCO46_RS06630;Dbxref=GenBank:WP_000818267.1;Name=WP_000818267.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=CCO46_RS06630;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818267.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 130680 132080 . - . ID=gene-CCO46_RS06635;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CCO46_RS06635;old_locus_tag=CCO46_06635 NZ_NPOH01000004.1 Protein Homology CDS 130680 132080 . - 0 ID=cds-WP_080203759.1;Parent=gene-CCO46_RS06635;Dbxref=GenBank:WP_080203759.1;Name=WP_080203759.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=CCO46_RS06635;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_080203759.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 132083 133174 . - . ID=gene-CCO46_RS06640;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CCO46_RS06640;old_locus_tag=CCO46_06640 NZ_NPOH01000004.1 Protein Homology CDS 132083 133174 . - 0 ID=cds-WP_094887741.1;Parent=gene-CCO46_RS06640;Dbxref=GenBank:WP_094887741.1;Name=WP_094887741.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=CCO46_RS06640;product=3-isopropylmalate dehydrogenase;protein_id=WP_094887741.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 133174 134745 . - . ID=gene-CCO46_RS06645;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=CCO46_RS06645;old_locus_tag=CCO46_06645 NZ_NPOH01000004.1 Protein Homology CDS 133174 134745 . - 0 ID=cds-WP_000082819.1;Parent=gene-CCO46_RS06645;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=CCO46_RS06645;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 134833 134919 . - . ID=gene-CCO46_RS06650;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=CCO46_RS06650;old_locus_tag=CCO46_06650 NZ_NPOH01000004.1 Protein Homology CDS 134833 134919 . - 0 ID=cds-WP_001575587.1;Parent=gene-CCO46_RS06650;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=CCO46_RS06650;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 135576 136520 . + . ID=gene-CCO46_RS06655;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=CCO46_RS06655;old_locus_tag=CCO46_06655 NZ_NPOH01000004.1 Protein Homology CDS 135576 136520 . + 0 ID=cds-WP_001115420.1;Parent=gene-CCO46_RS06655;Dbxref=GenBank:WP_001115420.1;Name=WP_001115420.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=CCO46_RS06655;product=transcriptional regulator LeuO;protein_id=WP_001115420.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 136842 138566 . + . ID=gene-CCO46_RS06660;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=CCO46_RS06660;old_locus_tag=CCO46_06660 NZ_NPOH01000004.1 Protein Homology CDS 136842 138566 . + 0 ID=cds-WP_000425612.1;Parent=gene-CCO46_RS06660;Dbxref=GenBank:WP_000425612.1;Name=WP_000425612.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=CCO46_RS06660;product=acetolactate synthase 3 large subunit;protein_id=WP_000425612.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 138569 139060 . + . ID=gene-CCO46_RS06665;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO46_RS06665;old_locus_tag=CCO46_06665 NZ_NPOH01000004.1 Protein Homology CDS 138569 139060 . + 0 ID=cds-WP_001563086.1;Parent=gene-CCO46_RS06665;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=CCO46_RS06665;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 139344 140348 . + . ID=gene-CCO46_RS06670;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=CCO46_RS06670;old_locus_tag=CCO46_06670 NZ_NPOH01000004.1 Protein Homology CDS 139344 140348 . + 0 ID=cds-WP_000762406.1;Parent=gene-CCO46_RS06670;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=CCO46_RS06670;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 140954 141412 . + . ID=gene-CCO46_RS06675;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CCO46_RS06675;old_locus_tag=CCO46_06675 NZ_NPOH01000004.1 Protein Homology CDS 140954 141412 . + 0 ID=cds-WP_000488294.1;Parent=gene-CCO46_RS06675;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=CCO46_RS06675;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 141414 142355 . + . ID=gene-CCO46_RS06680;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CCO46_RS06680;old_locus_tag=CCO46_06680 NZ_NPOH01000004.1 Protein Homology CDS 141414 142355 . + 0 ID=cds-WP_000970444.1;Parent=gene-CCO46_RS06680;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=CCO46_RS06680;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 142352 142717 . + . ID=gene-CCO46_RS06685;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CCO46_RS06685;old_locus_tag=CCO46_06685 NZ_NPOH01000004.1 Protein Homology CDS 142352 142717 . + 0 ID=cds-WP_000625651.1;Parent=gene-CCO46_RS06685;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=CCO46_RS06685;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 142733 144499 . + . ID=gene-CCO46_RS06690;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO46_RS06690;old_locus_tag=CCO46_06690 NZ_NPOH01000004.1 Protein Homology CDS 142733 144499 . + 0 ID=cds-WP_000642235.1;Parent=gene-CCO46_RS06690;Dbxref=GenBank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=CCO46_RS06690;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 144486 145973 . + . ID=gene-CCO46_RS06695;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=CCO46_RS06695;old_locus_tag=CCO46_06695 NZ_NPOH01000004.1 Protein Homology CDS 144486 145973 . + 0 ID=cds-WP_097363278.1;Parent=gene-CCO46_RS06695;Dbxref=GenBank:WP_097363278.1;Name=WP_097363278.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=CCO46_RS06695;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_097363278.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 145970 147328 . + . ID=gene-CCO46_RS06700;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=CCO46_RS06700;old_locus_tag=CCO46_06700 NZ_NPOH01000004.1 Protein Homology CDS 145970 147328 . + 0 ID=cds-WP_094887742.1;Parent=gene-CCO46_RS06700;Dbxref=GenBank:WP_094887742.1;Name=WP_094887742.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=CCO46_RS06700;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_094887742.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 147322 148404 . + . ID=gene-CCO46_RS06705;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CCO46_RS06705;old_locus_tag=CCO46_06705 NZ_NPOH01000004.1 Protein Homology CDS 147322 148404 . + 0 ID=cds-WP_000964138.1;Parent=gene-CCO46_RS06705;Dbxref=GenBank:WP_000964138.1;Name=WP_000964138.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=CCO46_RS06705;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 148407 149723 . + . ID=gene-CCO46_RS06710;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CCO46_RS06710;old_locus_tag=CCO46_06710 NZ_NPOH01000004.1 Protein Homology CDS 148407 149723 . + 0 ID=cds-WP_000796443.1;Parent=gene-CCO46_RS06710;Dbxref=GenBank:WP_000796443.1;Name=WP_000796443.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=CCO46_RS06710;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796443.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 149723 150967 . + . ID=gene-CCO46_RS06715;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CCO46_RS06715;old_locus_tag=CCO46_06715 NZ_NPOH01000004.1 Protein Homology CDS 149723 150967 . + 0 ID=cds-WP_001239803.1;Parent=gene-CCO46_RS06715;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=CCO46_RS06715;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 150964 152031 . + . ID=gene-CCO46_RS06720;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CCO46_RS06720;old_locus_tag=CCO46_06720 NZ_NPOH01000004.1 Protein Homology CDS 150964 152031 . + 0 ID=cds-WP_000016617.1;Parent=gene-CCO46_RS06720;Dbxref=GenBank:WP_000016617.1;Name=WP_000016617.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=CCO46_RS06720;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016617.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 152150 153625 . + . ID=gene-CCO46_RS06725;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CCO46_RS06725;old_locus_tag=CCO46_06725 NZ_NPOH01000004.1 Protein Homology CDS 152150 153625 . + 0 ID=cds-WP_001096072.1;Parent=gene-CCO46_RS06725;Dbxref=GenBank:WP_001096072.1;Name=WP_001096072.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=CCO46_RS06725;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096072.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 153618 154538 . + . ID=gene-CCO46_RS06730;Name=CCO46_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06730;old_locus_tag=CCO46_06730 NZ_NPOH01000004.1 Protein Homology CDS 153618 154538 . + 0 ID=cds-WP_000763903.1;Parent=gene-CCO46_RS06730;Dbxref=GenBank:WP_000763903.1;Name=WP_000763903.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=CCO46_RS06730;product=D-alanine--D-alanine ligase;protein_id=WP_000763903.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 154540 155370 . + . ID=gene-CCO46_RS06735;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=CCO46_RS06735;old_locus_tag=CCO46_06735 NZ_NPOH01000004.1 Protein Homology CDS 154540 155370 . + 0 ID=cds-WP_000075728.1;Parent=gene-CCO46_RS06735;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=CCO46_RS06735;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 155367 156629 . + . ID=gene-CCO46_RS06740;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CCO46_RS06740;old_locus_tag=CCO46_06740 NZ_NPOH01000004.1 Protein Homology CDS 155367 156629 . + 0 ID=cds-WP_000588463.1;Parent=gene-CCO46_RS06740;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=CCO46_RS06740;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 156690 157841 . + . ID=gene-CCO46_RS06745;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CCO46_RS06745;old_locus_tag=CCO46_06745 NZ_NPOH01000004.1 Protein Homology CDS 156690 157841 . + 0 ID=cds-WP_000462785.1;Parent=gene-CCO46_RS06745;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=CCO46_RS06745;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 157942 158859 . + . ID=gene-CCO46_RS06750;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=CCO46_RS06750;old_locus_tag=CCO46_06750 NZ_NPOH01000004.1 Protein Homology CDS 157942 158859 . + 0 ID=cds-WP_000595487.1;Parent=gene-CCO46_RS06750;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=CCO46_RS06750;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 159426 160712 . + . ID=gene-CCO46_RS06755;Name=CCO46_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06755;old_locus_tag=CCO46_06755 NZ_NPOH01000004.1 Protein Homology CDS 159426 160712 . + 0 ID=cds-WP_058331376.1;Parent=gene-CCO46_RS06755;Dbxref=GenBank:WP_058331376.1;Name=WP_058331376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946684.1;locus_tag=CCO46_RS06755;product=hypothetical protein;protein_id=WP_058331376.1;transl_table=11 NZ_NPOH01000004.1 RefSeq pseudogene 160725 160890 . + . ID=gene-CCO46_RS25425;Name=CCO46_RS25425;end_range=160890,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25425;partial=true;pseudo=true;start_range=.,160725 NZ_NPOH01000004.1 Protein Homology CDS 160725 160890 . + 0 ID=cds-CCO46_RS25425;Parent=gene-CCO46_RS25425;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0008686;end_range=160890,.;gbkey=CDS;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666802.1;locus_tag=CCO46_RS25425;partial=true;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;pseudo=true;start_range=.,160725;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 161284 161781 . + . ID=gene-CCO46_RS06765;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=CCO46_RS06765;old_locus_tag=CCO46_06765 NZ_NPOH01000004.1 Protein Homology CDS 161284 161781 . + 0 ID=cds-WP_000014333.1;Parent=gene-CCO46_RS06765;Dbxref=GenBank:WP_000014333.1;Name=WP_000014333.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=CCO46_RS06765;product=secA translation cis-regulator SecM;protein_id=WP_000014333.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 161843 164548 . + . ID=gene-CCO46_RS06770;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CCO46_RS06770;old_locus_tag=CCO46_06770 NZ_NPOH01000004.1 Protein Homology CDS 161843 164548 . + 0 ID=cds-WP_000905756.1;Parent=gene-CCO46_RS06770;Dbxref=GenBank:WP_000905756.1;Name=WP_000905756.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=CCO46_RS06770;product=preprotein translocase subunit SecA;protein_id=WP_000905756.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 164700 165095 . + . ID=gene-CCO46_RS06775;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=CCO46_RS06775;old_locus_tag=CCO46_06775 NZ_NPOH01000004.1 Protein Homology CDS 164700 165095 . + 0 ID=cds-WP_000736055.1;Parent=gene-CCO46_RS06775;Dbxref=GenBank:WP_000736055.1;Name=WP_000736055.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=CCO46_RS06775;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736055.1;transl_table=11 NZ_NPOH01000004.1 RefSeq pseudogene 165129 165281 . - . ID=gene-CCO46_RS25430;Name=CCO46_RS25430;end_range=165281,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25430;old_locus_tag=CCO46_06780;partial=true;pseudo=true NZ_NPOH01000004.1 Protein Homology CDS 165129 165281 . - 0 ID=cds-CCO46_RS25430;Parent=gene-CCO46_RS25430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=165281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=CCO46_RS25430;partial=true;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_NPOH01000004.1 RefSeq pseudogene 165308 165421 . + . ID=gene-CCO46_RS06785;Name=CCO46_RS06785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS06785;old_locus_tag=CCO46_06785;partial=true;pseudo=true;start_range=.,165308 NZ_NPOH01000004.1 Protein Homology CDS 165308 165421 . + 0 ID=cds-CCO46_RS06785;Parent=gene-CCO46_RS06785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894003.1;locus_tag=CCO46_RS06785;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,165308;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 165418 165609 . - . ID=gene-CCO46_RS06790;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=CCO46_RS06790;old_locus_tag=CCO46_06790 NZ_NPOH01000004.1 Protein Homology CDS 165418 165609 . - 0 ID=cds-WP_001286419.1;Parent=gene-CCO46_RS06790;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=CCO46_RS06790;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 165619 166362 . - . ID=gene-CCO46_RS06795;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=CCO46_RS06795;old_locus_tag=CCO46_06795 NZ_NPOH01000004.1 Protein Homology CDS 165619 166362 . - 0 ID=cds-WP_023194214.1;Parent=gene-CCO46_RS06795;Dbxref=GenBank:WP_023194214.1;Name=WP_023194214.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=CCO46_RS06795;product=cell division protein ZapD;protein_id=WP_023194214.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 166362 166982 . - . ID=gene-CCO46_RS06800;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CCO46_RS06800;old_locus_tag=CCO46_06800 NZ_NPOH01000004.1 Protein Homology CDS 166362 166982 . - 0 ID=cds-WP_001270913.1;Parent=gene-CCO46_RS06800;Dbxref=GenBank:WP_001270913.1;Name=WP_001270913.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=CCO46_RS06800;product=dephospho-CoA kinase;protein_id=WP_001270913.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 167208 168251 . + . ID=gene-CCO46_RS06805;Name=CCO46_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06805;old_locus_tag=CCO46_06805 NZ_NPOH01000004.1 Protein Homology CDS 167208 168251 . + 0 ID=cds-WP_001217365.1;Parent=gene-CCO46_RS06805;Dbxref=GenBank:WP_001217365.1;Name=WP_001217365.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=CCO46_RS06805;product=GMP reductase;protein_id=WP_001217365.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 168282 169484 . - . ID=gene-CCO46_RS06810;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=CCO46_RS06810;old_locus_tag=CCO46_06810 NZ_NPOH01000004.1 Protein Homology CDS 168282 169484 . - 0 ID=cds-WP_000114105.1;Parent=gene-CCO46_RS06810;Dbxref=GenBank:WP_000114105.1;Name=WP_000114105.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=CCO46_RS06810;product=protein transport protein HofC;protein_id=WP_000114105.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 169474 170859 . - . ID=gene-CCO46_RS06815;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=CCO46_RS06815;old_locus_tag=CCO46_06815 NZ_NPOH01000004.1 Protein Homology CDS 169474 170859 . - 0 ID=cds-WP_094882544.1;Parent=gene-CCO46_RS06815;Dbxref=GenBank:WP_094882544.1;Name=WP_094882544.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=CCO46_RS06815;product=type II secretion system protein GspE;protein_id=WP_094882544.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 170869 171306 . - . ID=gene-CCO46_RS06820;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=CCO46_RS06820;old_locus_tag=CCO46_06820 NZ_NPOH01000004.1 Protein Homology CDS 170869 171306 . - 0 ID=cds-WP_000414989.1;Parent=gene-CCO46_RS06820;Dbxref=GenBank:WP_000414989.1;Name=WP_000414989.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=CCO46_RS06820;product=prepilin peptidase-dependent pilin;protein_id=WP_000414989.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 171528 172421 . - . ID=gene-CCO46_RS06830;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=CCO46_RS06830;old_locus_tag=CCO46_06830 NZ_NPOH01000004.1 Protein Homology CDS 171528 172421 . - 0 ID=cds-WP_001135135.1;Parent=gene-CCO46_RS06830;Dbxref=GenBank:WP_001135135.1;Name=WP_001135135.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=CCO46_RS06830;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135135.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 172509 173072 . + . ID=gene-CCO46_RS06835;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=CCO46_RS06835;old_locus_tag=CCO46_06835 NZ_NPOH01000004.1 Protein Homology CDS 172509 173072 . + 0 ID=cds-WP_000936326.1;Parent=gene-CCO46_RS06835;Dbxref=GenBank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=CCO46_RS06835;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 173069 173923 . + . ID=gene-CCO46_RS06840;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=CCO46_RS06840;old_locus_tag=CCO46_06840 NZ_NPOH01000004.1 Protein Homology CDS 173069 173923 . + 0 ID=cds-WP_000172039.1;Parent=gene-CCO46_RS06840;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=CCO46_RS06840;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 174015 174965 . - . ID=gene-CCO46_RS06845;Name=CCO46_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06845;old_locus_tag=CCO46_06845 NZ_NPOH01000004.1 Protein Homology CDS 174015 174965 . - 0 ID=cds-WP_097363280.1;Parent=gene-CCO46_RS06845;Dbxref=GenBank:WP_097363280.1;Name=WP_097363280.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=CCO46_RS06845;product=glycoside hydrolase family 43 protein;protein_id=WP_097363280.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 174965 176371 . - . ID=gene-CCO46_RS06850;Name=CCO46_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06850;old_locus_tag=CCO46_06850 NZ_NPOH01000004.1 Protein Homology CDS 174965 176371 . - 0 ID=cds-WP_000357539.1;Parent=gene-CCO46_RS06850;Dbxref=GenBank:WP_000357539.1;Name=WP_000357539.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=CCO46_RS06850;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_000357539.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 176535 177908 . - . ID=gene-CCO46_RS06855;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=CCO46_RS06855;old_locus_tag=CCO46_06855 NZ_NPOH01000004.1 Protein Homology CDS 176535 177908 . - 0 ID=cds-WP_000969487.1;Parent=gene-CCO46_RS06855;Dbxref=GenBank:WP_000969487.1;Name=WP_000969487.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=CCO46_RS06855;product=aromatic amino acid transporter AroP;protein_id=WP_000969487.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 178471 179235 . + . ID=gene-CCO46_RS06860;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=CCO46_RS06860;old_locus_tag=CCO46_06860 NZ_NPOH01000004.1 Protein Homology CDS 178471 179235 . + 0 ID=cds-WP_000331771.1;Parent=gene-CCO46_RS06860;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=CCO46_RS06860;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 179542 182205 . + . ID=gene-CCO46_RS06870;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=CCO46_RS06870;old_locus_tag=CCO46_06870 NZ_NPOH01000004.1 Protein Homology CDS 179542 182205 . + 0 ID=cds-WP_000003841.1;Parent=gene-CCO46_RS06870;Dbxref=GenBank:WP_000003841.1;Name=WP_000003841.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=CCO46_RS06870;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003841.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 182220 184109 . + . ID=gene-CCO46_RS06875;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=CCO46_RS06875;old_locus_tag=CCO46_06875 NZ_NPOH01000004.1 Protein Homology CDS 182220 184109 . + 0 ID=cds-WP_097363281.1;Parent=gene-CCO46_RS06875;Dbxref=GenBank:WP_097363281.1;Name=WP_097363281.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=CCO46_RS06875;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_097363281.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 184310 185734 . + . ID=gene-CCO46_RS06880;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CCO46_RS06880;old_locus_tag=CCO46_06880 NZ_NPOH01000004.1 Protein Homology CDS 184310 185734 . + 0 ID=cds-WP_001537804.1;Parent=gene-CCO46_RS06880;Dbxref=GenBank:WP_001537804.1;Name=WP_001537804.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=CCO46_RS06880;product=dihydrolipoyl dehydrogenase;protein_id=WP_001537804.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 186023 186307 . + . ID=gene-CCO46_RS06885;Name=CCO46_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06885;old_locus_tag=CCO46_06885 NZ_NPOH01000004.1 Protein Homology CDS 186023 186307 . + 0 ID=cds-WP_017465627.1;Parent=gene-CCO46_RS06885;Dbxref=GenBank:WP_017465627.1;Name=WP_017465627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=CCO46_RS06885;product=hypothetical protein;protein_id=WP_017465627.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 186345 187136 . - . ID=gene-CCO46_RS06890;Name=CCO46_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06890;old_locus_tag=CCO46_06890 NZ_NPOH01000004.1 Protein Homology CDS 186345 187136 . - 0 ID=cds-WP_000757452.1;Parent=gene-CCO46_RS06890;Dbxref=GenBank:WP_000757452.1;Name=WP_000757452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=CCO46_RS06890;product=DUF2950 family protein;protein_id=WP_000757452.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 187149 188777 . - . ID=gene-CCO46_RS06895;Name=CCO46_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06895;old_locus_tag=CCO46_06895 NZ_NPOH01000004.1 Protein Homology CDS 187149 188777 . - 0 ID=cds-WP_097363282.1;Parent=gene-CCO46_RS06895;Dbxref=GenBank:WP_097363282.1;Name=WP_097363282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=CCO46_RS06895;product=DUF3300 domain-containing protein;protein_id=WP_097363282.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 189166 191763 . + . ID=gene-CCO46_RS06900;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=CCO46_RS06900;old_locus_tag=CCO46_06900 NZ_NPOH01000004.1 Protein Homology CDS 189166 191763 . + 0 ID=cds-WP_000888958.1;Parent=gene-CCO46_RS06900;Dbxref=GenBank:WP_000888958.1;Name=WP_000888958.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=CCO46_RS06900;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_000888958.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 191803 192267 . - . ID=gene-CCO46_RS06905;Name=CCO46_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06905;old_locus_tag=CCO46_06905 NZ_NPOH01000004.1 Protein Homology CDS 191803 192267 . - 0 ID=cds-WP_000110431.1;Parent=gene-CCO46_RS06905;Dbxref=GenBank:WP_000110431.1;Name=WP_000110431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=CCO46_RS06905;product=membrane protein;protein_id=WP_000110431.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 192677 193000 . - . ID=gene-CCO46_RS06910;Name=CCO46_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06910;old_locus_tag=CCO46_06910 NZ_NPOH01000004.1 Protein Homology CDS 192677 193000 . - 0 ID=cds-WP_001101536.1;Parent=gene-CCO46_RS06910;Dbxref=GenBank:WP_001101536.1;Name=WP_001101536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=CCO46_RS06910;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_001101536.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 193271 193633 . + . ID=gene-CCO46_RS06915;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=CCO46_RS06915;old_locus_tag=CCO46_06915 NZ_NPOH01000004.1 Protein Homology CDS 193271 193633 . + 0 ID=cds-WP_000384308.1;Parent=gene-CCO46_RS06915;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=CCO46_RS06915;product=protein YacL;protein_id=WP_000384308.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 193868 194821 . + . ID=gene-CCO46_RS06920;Name=CCO46_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06920;old_locus_tag=CCO46_06920 NZ_NPOH01000004.1 Protein Homology CDS 193868 194821 . + 0 ID=cds-WP_001022089.1;Parent=gene-CCO46_RS06920;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=CCO46_RS06920;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 194818 196089 . + . ID=gene-CCO46_RS06925;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=CCO46_RS06925;old_locus_tag=CCO46_06925 NZ_NPOH01000004.1 Protein Homology CDS 194818 196089 . + 0 ID=cds-WP_080151096.1;Parent=gene-CCO46_RS06925;Dbxref=GenBank:WP_080151096.1;Name=WP_080151096.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=CCO46_RS06925;product=D-threonate kinase;protein_id=WP_080151096.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 196079 197062 . + . ID=gene-CCO46_RS06930;Name=CCO46_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06930;old_locus_tag=CCO46_06930 NZ_NPOH01000004.1 Protein Homology CDS 196079 197062 . + 0 ID=cds-WP_000448749.1;Parent=gene-CCO46_RS06930;Dbxref=GenBank:WP_000448749.1;Name=WP_000448749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=CCO46_RS06930;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448749.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 197072 197839 . + . ID=gene-CCO46_RS06935;Name=CCO46_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06935;old_locus_tag=CCO46_06935 NZ_NPOH01000004.1 Protein Homology CDS 197072 197839 . + 0 ID=cds-WP_000678254.1;Parent=gene-CCO46_RS06935;Dbxref=GenBank:WP_000678254.1;Name=WP_000678254.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=CCO46_RS06935;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678254.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 197869 198663 . - . ID=gene-CCO46_RS06940;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=CCO46_RS06940;old_locus_tag=CCO46_06940 NZ_NPOH01000004.1 Protein Homology CDS 197869 198663 . - 0 ID=cds-WP_000734276.1;Parent=gene-CCO46_RS06940;Dbxref=GenBank:WP_000734276.1;Name=WP_000734276.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=CCO46_RS06940;product=adenosylmethionine decarboxylase;protein_id=WP_000734276.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 198684 199544 . - . ID=gene-CCO46_RS06945;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=CCO46_RS06945;old_locus_tag=CCO46_06945 NZ_NPOH01000004.1 Protein Homology CDS 198684 199544 . - 0 ID=cds-WP_001534394.1;Parent=gene-CCO46_RS06945;Dbxref=GenBank:WP_001534394.1;Name=WP_001534394.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=CCO46_RS06945;product=polyamine aminopropyltransferase;protein_id=WP_001534394.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 199651 199998 . - . ID=gene-CCO46_RS06950;Name=CCO46_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06950;old_locus_tag=CCO46_06950 NZ_NPOH01000004.1 Protein Homology CDS 199651 199998 . - 0 ID=cds-WP_000846613.1;Parent=gene-CCO46_RS06950;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=CCO46_RS06950;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 200200 201810 . + . ID=gene-CCO46_RS06955;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=CCO46_RS06955;old_locus_tag=CCO46_06955 NZ_NPOH01000004.1 Protein Homology CDS 200200 201810 . + 0 ID=cds-WP_097363283.1;Parent=gene-CCO46_RS06955;Dbxref=GenBank:WP_097363283.1;Name=WP_097363283.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=CCO46_RS06955;product=multicopper oxidase CueO;protein_id=WP_097363283.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 201888 204278 . - . ID=gene-CCO46_RS06960;Name=CCO46_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06960;old_locus_tag=CCO46_06960 NZ_NPOH01000004.1 Protein Homology CDS 201888 204278 . - 0 ID=cds-WP_000829732.1;Parent=gene-CCO46_RS06960;Dbxref=GenBank:WP_000829732.1;Name=WP_000829732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=CCO46_RS06960;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_000829732.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 204484 205020 . + . ID=gene-CCO46_RS06965;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CCO46_RS06965;old_locus_tag=CCO46_06965 NZ_NPOH01000004.1 Protein Homology CDS 204484 205020 . + 0 ID=cds-WP_000683342.1;Parent=gene-CCO46_RS06965;Dbxref=GenBank:WP_000683342.1;Name=WP_000683342.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=CCO46_RS06965;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683342.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 205078 205740 . - . ID=gene-CCO46_RS06970;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=CCO46_RS06970;old_locus_tag=CCO46_06970 NZ_NPOH01000004.1 Protein Homology CDS 205078 205740 . - 0 ID=cds-WP_000651590.1;Parent=gene-CCO46_RS06970;Dbxref=GenBank:WP_000651590.1;Name=WP_000651590.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=CCO46_RS06970;product=carbonate dehydratase;protein_id=WP_000651590.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 205849 206775 . + . ID=gene-CCO46_RS06975;Name=CCO46_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06975;old_locus_tag=CCO46_06975 NZ_NPOH01000004.1 Protein Homology CDS 205849 206775 . + 0 ID=cds-WP_000150628.1;Parent=gene-CCO46_RS06975;Dbxref=GenBank:WP_000150628.1;Name=WP_000150628.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=CCO46_RS06975;product=ABC transporter ATP-binding protein;protein_id=WP_000150628.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 206772 207542 . + . ID=gene-CCO46_RS06980;Name=CCO46_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06980;old_locus_tag=CCO46_06980 NZ_NPOH01000004.1 Protein Homology CDS 206772 207542 . + 0 ID=cds-WP_000983416.1;Parent=gene-CCO46_RS06980;Dbxref=GenBank:WP_000983416.1;Name=WP_000983416.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=CCO46_RS06980;product=ABC transporter permease;protein_id=WP_000983416.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 207659 208738 . - . ID=gene-CCO46_RS06985;Name=CCO46_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06985;old_locus_tag=CCO46_06985 NZ_NPOH01000004.1 Protein Homology CDS 207659 208738 . - 0 ID=cds-WP_000794043.1;Parent=gene-CCO46_RS06985;Dbxref=GenBank:WP_000794043.1;Name=WP_000794043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=CCO46_RS06985;product=fimbrial protein;protein_id=WP_000794043.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 208747 211293 . - . ID=gene-CCO46_RS06990;Name=CCO46_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS06990;old_locus_tag=CCO46_06990 NZ_NPOH01000004.1 Protein Homology CDS 208747 211293 . - 0 ID=cds-WP_001231772.1;Parent=gene-CCO46_RS06990;Dbxref=GenBank:WP_001231772.1;Name=WP_001231772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=CCO46_RS06990;product=fimbrial outer membrane usher protein;protein_id=WP_001231772.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 211320 212003 . - . ID=gene-CCO46_RS06995;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=CCO46_RS06995;old_locus_tag=CCO46_06995 NZ_NPOH01000004.1 Protein Homology CDS 211320 212003 . - 0 ID=cds-WP_001086405.1;Parent=gene-CCO46_RS06995;Dbxref=GenBank:WP_001086405.1;Name=WP_001086405.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=CCO46_RS06995;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086405.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 212051 212584 . - . ID=gene-CCO46_RS07000;Name=stiA;gbkey=Gene;gene=stiA;gene_biotype=protein_coding;locus_tag=CCO46_RS07000;old_locus_tag=CCO46_07000 NZ_NPOH01000004.1 Protein Homology CDS 212051 212584 . - 0 ID=cds-WP_000779125.1;Parent=gene-CCO46_RS07000;Dbxref=GenBank:WP_000779125.1;Name=WP_000779125.1;gbkey=CDS;gene=stiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=CCO46_RS07000;product=Sti fimbria major subunit StiA;protein_id=WP_000779125.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 212954 213394 . + . ID=gene-CCO46_RS07005;Name=CCO46_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07005;old_locus_tag=CCO46_07005 NZ_NPOH01000004.1 Protein Homology CDS 212954 213394 . + 0 ID=cds-WP_058331369.1;Parent=gene-CCO46_RS07005;Dbxref=GenBank:WP_058331369.1;Name=WP_058331369.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=CCO46_RS07005;product=PTS sugar transporter subunit IIA;protein_id=WP_058331369.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 213456 214685 . + . ID=gene-CCO46_RS07010;Name=CCO46_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07010;old_locus_tag=CCO46_07010 NZ_NPOH01000004.1 Protein Homology CDS 213456 214685 . + 0 ID=cds-WP_024146198.1;Parent=gene-CCO46_RS07010;Dbxref=GenBank:WP_024146198.1;Name=WP_024146198.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=CCO46_RS07010;product=polysaccharide deacetylase family protein;protein_id=WP_024146198.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 214692 215072 . - . ID=gene-CCO46_RS07015;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CCO46_RS07015;old_locus_tag=CCO46_07015 NZ_NPOH01000004.1 Protein Homology CDS 214692 215072 . - 0 ID=cds-WP_000621526.1;Parent=gene-CCO46_RS07015;Dbxref=GenBank:WP_000621526.1;Name=WP_000621526.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=CCO46_RS07015;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 215167 216021 . - . ID=gene-CCO46_RS07025;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CCO46_RS07025;old_locus_tag=CCO46_07025 NZ_NPOH01000004.1 Protein Homology CDS 215167 216021 . - 0 ID=cds-WP_000905350.1;Parent=gene-CCO46_RS07025;Dbxref=GenBank:WP_000905350.1;Name=WP_000905350.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=CCO46_RS07025;product=pantoate--beta-alanine ligase;protein_id=WP_000905350.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 216147 216938 . - . ID=gene-CCO46_RS07030;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CCO46_RS07030;old_locus_tag=CCO46_07030 NZ_NPOH01000004.1 Protein Homology CDS 216147 216938 . - 0 ID=cds-WP_000805489.1;Parent=gene-CCO46_RS07030;Dbxref=GenBank:WP_000805489.1;Name=WP_000805489.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=CCO46_RS07030;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805489.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 217059 217538 . - . ID=gene-CCO46_RS07035;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CCO46_RS07035;old_locus_tag=CCO46_07035 NZ_NPOH01000004.1 Protein Homology CDS 217059 217538 . - 0 ID=cds-WP_000150777.1;Parent=gene-CCO46_RS07035;Dbxref=GenBank:WP_000150777.1;Name=WP_000150777.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=CCO46_RS07035;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150777.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 217535 218932 . - . ID=gene-CCO46_RS07040;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=CCO46_RS07040;old_locus_tag=CCO46_07040 NZ_NPOH01000004.1 Protein Homology CDS 217535 218932 . - 0 ID=cds-WP_204355897.1;Parent=gene-CCO46_RS07040;Dbxref=GenBank:WP_204355897.1;Name=WP_204355897.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=CCO46_RS07040;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204355897.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 219094 219990 . - . ID=gene-CCO46_RS07045;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=CCO46_RS07045;old_locus_tag=CCO46_07045 NZ_NPOH01000004.1 Protein Homology CDS 219094 219990 . - 0 ID=cds-WP_001682576.1;Parent=gene-CCO46_RS07045;Dbxref=GenBank:WP_001682576.1;Name=WP_001682576.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=CCO46_RS07045;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_001682576.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 220059 220514 . - . ID=gene-CCO46_RS07050;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=CCO46_RS07050;old_locus_tag=CCO46_07050 NZ_NPOH01000004.1 Protein Homology CDS 220059 220514 . - 0 ID=cds-WP_001155232.1;Parent=gene-CCO46_RS07050;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=CCO46_RS07050;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 220691 221395 . - . ID=gene-CCO46_RS07055;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=CCO46_RS07055;old_locus_tag=CCO46_07055 NZ_NPOH01000004.1 Protein Homology CDS 220691 221395 . - 0 ID=cds-WP_000899408.1;Parent=gene-CCO46_RS07055;Dbxref=GenBank:WP_000899408.1;Name=WP_000899408.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=CCO46_RS07055;product=DNA/RNA nuclease SfsA;protein_id=WP_000899408.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 221412 221942 . - . ID=gene-CCO46_RS07060;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=CCO46_RS07060;old_locus_tag=CCO46_07060 NZ_NPOH01000004.1 Protein Homology CDS 221412 221942 . - 0 ID=cds-WP_001294178.1;Parent=gene-CCO46_RS07060;Dbxref=GenBank:WP_001294178.1;Name=WP_001294178.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=CCO46_RS07060;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294178.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 222015 224444 . + . ID=gene-CCO46_RS07065;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=CCO46_RS07065;old_locus_tag=CCO46_07065 NZ_NPOH01000004.1 Protein Homology CDS 222015 224444 . + 0 ID=cds-WP_024146197.1;Parent=gene-CCO46_RS07065;Dbxref=GenBank:WP_024146197.1;Name=WP_024146197.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=CCO46_RS07065;product=ATP-dependent helicase HrpB;protein_id=WP_024146197.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 224585 227107 . + . ID=gene-CCO46_RS07070;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=CCO46_RS07070;old_locus_tag=CCO46_07070 NZ_NPOH01000004.1 Protein Homology CDS 224585 227107 . + 0 ID=cds-WP_000918122.1;Parent=gene-CCO46_RS07070;Dbxref=GenBank:WP_000918122.1;Name=WP_000918122.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=CCO46_RS07070;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918122.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 227400 229589 . + . ID=gene-CCO46_RS07075;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=CCO46_RS07075;old_locus_tag=CCO46_07075 NZ_NPOH01000004.1 Protein Homology CDS 227400 229589 . + 0 ID=cds-WP_000113219.1;Parent=gene-CCO46_RS07075;Dbxref=GenBank:WP_000113219.1;Name=WP_000113219.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=CCO46_RS07075;product=ferrichrome porin FhuA;protein_id=WP_000113219.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 229638 230435 . + . ID=gene-CCO46_RS07080;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=CCO46_RS07080;old_locus_tag=CCO46_07080 NZ_NPOH01000004.1 Protein Homology CDS 229638 230435 . + 0 ID=cds-WP_058331366.1;Parent=gene-CCO46_RS07080;Dbxref=GenBank:WP_058331366.1;Name=WP_058331366.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=CCO46_RS07080;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_058331366.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 230435 231325 . + . ID=gene-CCO46_RS07085;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=CCO46_RS07085;old_locus_tag=CCO46_07085 NZ_NPOH01000004.1 Protein Homology CDS 230435 231325 . + 0 ID=cds-WP_001205359.1;Parent=gene-CCO46_RS07085;Dbxref=GenBank:WP_001205359.1;Name=WP_001205359.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=CCO46_RS07085;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001205359.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 231340 233379 . + . ID=gene-CCO46_RS07090;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=CCO46_RS07090;old_locus_tag=CCO46_07090 NZ_NPOH01000004.1 Protein Homology CDS 231340 233379 . + 0 ID=cds-WP_097363284.1;Parent=gene-CCO46_RS07090;Dbxref=GenBank:WP_097363284.1;Name=WP_097363284.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=CCO46_RS07090;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_097363284.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 233415 233729 . + . ID=gene-CCO46_RS07095;Name=CCO46_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07095;old_locus_tag=CCO46_07095 NZ_NPOH01000004.1 GeneMarkS-2+ CDS 233415 233729 . + 0 ID=cds-WP_139775314.1;Parent=gene-CCO46_RS07095;Dbxref=GenBank:WP_139775314.1;Name=WP_139775314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS07095;product=hypothetical protein;protein_id=WP_139775314.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 234320 234880 . + . ID=gene-CCO46_RS07100;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=CCO46_RS07100;old_locus_tag=CCO46_07100 NZ_NPOH01000004.1 Protein Homology CDS 234320 234880 . + 0 ID=cds-WP_001090554.1;Parent=gene-CCO46_RS07100;Dbxref=GenBank:WP_001090554.1;Name=WP_001090554.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=CCO46_RS07100;product=fimbrial major subunit StfA;protein_id=WP_001090554.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 234966 237623 . + . ID=gene-CCO46_RS07105;Name=CCO46_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07105;old_locus_tag=CCO46_07105 NZ_NPOH01000004.1 Protein Homology CDS 234966 237623 . + 0 ID=cds-WP_058331364.1;Parent=gene-CCO46_RS07105;Dbxref=GenBank:WP_058331364.1;Name=WP_058331364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=CCO46_RS07105;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_058331364.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 237641 238393 . + . ID=gene-CCO46_RS07110;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=CCO46_RS07110;old_locus_tag=CCO46_07110 NZ_NPOH01000004.1 Protein Homology CDS 237641 238393 . + 0 ID=cds-WP_000982719.1;Parent=gene-CCO46_RS07110;Dbxref=GenBank:WP_000982719.1;Name=WP_000982719.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=CCO46_RS07110;product=fimbrial chaperone StfD;protein_id=WP_000982719.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 238412 238924 . + . ID=gene-CCO46_RS07115;Name=CCO46_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07115;old_locus_tag=CCO46_07115 NZ_NPOH01000004.1 Protein Homology CDS 238412 238924 . + 0 ID=cds-WP_001250313.1;Parent=gene-CCO46_RS07115;Dbxref=GenBank:WP_001250313.1;Name=WP_001250313.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=CCO46_RS07115;product=fimbrial protein;protein_id=WP_001250313.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 238921 239397 . + . ID=gene-CCO46_RS07120;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=CCO46_RS07120;old_locus_tag=CCO46_07120 NZ_NPOH01000004.1 Protein Homology CDS 238921 239397 . + 0 ID=cds-WP_000738038.1;Parent=gene-CCO46_RS07120;Dbxref=GenBank:WP_000738038.1;Name=WP_000738038.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=CCO46_RS07120;product=fimbrial minor subunit StfF;protein_id=WP_000738038.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 239397 239927 . + . ID=gene-CCO46_RS07125;Name=CCO46_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07125;old_locus_tag=CCO46_07125 NZ_NPOH01000004.1 Protein Homology CDS 239397 239927 . + 0 ID=cds-WP_001129321.1;Parent=gene-CCO46_RS07125;Dbxref=GenBank:WP_001129321.1;Name=WP_001129321.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=CCO46_RS07125;product=fimbrial protein;protein_id=WP_001129321.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 239927 240769 . + . ID=gene-CCO46_RS07130;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=CCO46_RS07130;old_locus_tag=CCO46_07130 NZ_NPOH01000004.1 Protein Homology CDS 239927 240769 . + 0 ID=cds-WP_058331363.1;Parent=gene-CCO46_RS07130;Dbxref=GenBank:WP_058331363.1;Name=WP_058331363.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=CCO46_RS07130;product=fimbrial adhesin StfH;protein_id=WP_058331363.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 240868 242148 . - . ID=gene-CCO46_RS07135;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CCO46_RS07135;old_locus_tag=CCO46_07135 NZ_NPOH01000004.1 Protein Homology CDS 240868 242148 . - 0 ID=cds-WP_000045249.1;Parent=gene-CCO46_RS07135;Dbxref=GenBank:WP_000045249.1;Name=WP_000045249.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=CCO46_RS07135;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045249.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 242318 243739 . + . ID=gene-CCO46_RS07140;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=CCO46_RS07140;old_locus_tag=CCO46_07140 NZ_NPOH01000004.1 Protein Homology CDS 242318 243739 . + 0 ID=cds-WP_000845430.1;Parent=gene-CCO46_RS07140;Dbxref=GenBank:WP_000845430.1;Name=WP_000845430.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=CCO46_RS07140;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845430.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 243821 244165 . + . ID=gene-CCO46_RS07145;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=CCO46_RS07145;old_locus_tag=CCO46_07145 NZ_NPOH01000004.1 Protein Homology CDS 243821 244165 . + 0 ID=cds-WP_001278668.1;Parent=gene-CCO46_RS07145;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=CCO46_RS07145;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 244266 244889 . - . ID=gene-CCO46_RS07150;Name=CCO46_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07150;old_locus_tag=CCO46_07150 NZ_NPOH01000004.1 Protein Homology CDS 244266 244889 . - 0 ID=cds-WP_000964234.1;Parent=gene-CCO46_RS07150;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=CCO46_RS07150;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 244926 245726 . - . ID=gene-CCO46_RS07155;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=CCO46_RS07155;old_locus_tag=CCO46_07155 NZ_NPOH01000004.1 Protein Homology CDS 244926 245726 . - 0 ID=cds-WP_001118838.1;Parent=gene-CCO46_RS07155;Dbxref=GenBank:WP_001118838.1;Name=WP_001118838.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=CCO46_RS07155;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001118838.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 245719 246417 . - . ID=gene-CCO46_RS07160;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=CCO46_RS07160;old_locus_tag=CCO46_07160 NZ_NPOH01000004.1 Protein Homology CDS 245719 246417 . - 0 ID=cds-WP_000689822.1;Parent=gene-CCO46_RS07160;Dbxref=GenBank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=CCO46_RS07160;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 246502 248019 . + . ID=gene-CCO46_RS07165;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=CCO46_RS07165;old_locus_tag=CCO46_07165 NZ_NPOH01000004.1 Protein Homology CDS 246502 248019 . + 0 ID=cds-WP_000146450.1;Parent=gene-CCO46_RS07165;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=CCO46_RS07165;product=dGTPase;protein_id=WP_000146450.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 248149 249576 . + . ID=gene-CCO46_RS07170;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=CCO46_RS07170;old_locus_tag=CCO46_07170 NZ_NPOH01000004.1 Protein Homology CDS 248149 249576 . + 0 ID=cds-WP_000753958.1;Parent=gene-CCO46_RS07170;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=CCO46_RS07170;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 249729 250886 . + . ID=gene-CCO46_RS07175;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=CCO46_RS07175;old_locus_tag=CCO46_07175 NZ_NPOH01000004.1 Protein Homology CDS 249729 250886 . + 0 ID=cds-WP_000929417.1;Parent=gene-CCO46_RS07175;Dbxref=GenBank:WP_000929417.1;Name=WP_000929417.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=CCO46_RS07175;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929417.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 251008 253977 . - . ID=gene-CCO46_RS07180;Name=CCO46_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07180;old_locus_tag=CCO46_07180 NZ_NPOH01000004.1 Protein Homology CDS 251008 253977 . - 0 ID=cds-WP_058331362.1;Parent=gene-CCO46_RS07180;Dbxref=GenBank:WP_058331362.1;Name=WP_058331362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527551.1;locus_tag=CCO46_RS07180;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_058331362.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 254162 254548 . - . ID=gene-CCO46_RS07185;Name=CCO46_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07185;old_locus_tag=CCO46_07185 NZ_NPOH01000004.1 Protein Homology CDS 254162 254548 . - 0 ID=cds-WP_000272193.1;Parent=gene-CCO46_RS07185;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=CCO46_RS07185;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 254795 256096 . + . ID=gene-CCO46_RS07190;Name=CCO46_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07190;old_locus_tag=CCO46_07190 NZ_NPOH01000004.1 Protein Homology CDS 254795 256096 . + 0 ID=cds-WP_097363285.1;Parent=gene-CCO46_RS07190;Dbxref=GenBank:WP_097363285.1;Name=WP_097363285.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=CCO46_RS07190;product=MFS transporter;protein_id=WP_097363285.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 256133 256957 . - . ID=gene-CCO46_RS07195;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CCO46_RS07195;old_locus_tag=CCO46_07195 NZ_NPOH01000004.1 Protein Homology CDS 256133 256957 . - 0 ID=cds-WP_001186672.1;Parent=gene-CCO46_RS07195;Dbxref=GenBank:WP_001186672.1;Name=WP_001186672.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=CCO46_RS07195;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186672.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 256987 259659 . - . ID=gene-CCO46_RS07200;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=CCO46_RS07200;old_locus_tag=CCO46_07200 NZ_NPOH01000004.1 Protein Homology CDS 256987 259659 . - 0 ID=cds-WP_001094519.1;Parent=gene-CCO46_RS07200;Dbxref=GenBank:WP_001094519.1;Name=WP_001094519.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=CCO46_RS07200;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094519.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 259897 260691 . - . ID=gene-CCO46_RS07210;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CCO46_RS07210;old_locus_tag=CCO46_07210 NZ_NPOH01000004.1 Protein Homology CDS 259897 260691 . - 0 ID=cds-WP_001018214.1;Parent=gene-CCO46_RS07210;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=CCO46_RS07210;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 261142 261867 . + . ID=gene-CCO46_RS07220;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CCO46_RS07220;old_locus_tag=CCO46_07220 NZ_NPOH01000004.1 Protein Homology CDS 261142 261867 . + 0 ID=cds-WP_000246886.1;Parent=gene-CCO46_RS07220;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=CCO46_RS07220;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 262125 262976 . + . ID=gene-CCO46_RS07230;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CCO46_RS07230;old_locus_tag=CCO46_07230 NZ_NPOH01000004.1 Protein Homology CDS 262125 262976 . + 0 ID=cds-WP_000808106.1;Parent=gene-CCO46_RS07230;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=CCO46_RS07230;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 263121 263846 . + . ID=gene-CCO46_RS07235;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CCO46_RS07235;old_locus_tag=CCO46_07235 NZ_NPOH01000004.1 Protein Homology CDS 263121 263846 . + 0 ID=cds-WP_000224567.1;Parent=gene-CCO46_RS07235;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=CCO46_RS07235;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 263993 264550 . + . ID=gene-CCO46_RS07240;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CCO46_RS07240;old_locus_tag=CCO46_07240 NZ_NPOH01000004.1 Protein Homology CDS 263993 264550 . + 0 ID=cds-WP_000622423.1;Parent=gene-CCO46_RS07240;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=CCO46_RS07240;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 264692 265888 . + . ID=gene-CCO46_RS07245;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=CCO46_RS07245;old_locus_tag=CCO46_07245 NZ_NPOH01000004.1 Protein Homology CDS 264692 265888 . + 0 ID=cds-WP_000811905.1;Parent=gene-CCO46_RS07245;Dbxref=GenBank:WP_000811905.1;Name=WP_000811905.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=CCO46_RS07245;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811905.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 266201 266959 . + . ID=gene-CCO46_RS07255;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=CCO46_RS07255;old_locus_tag=CCO46_07255 NZ_NPOH01000004.1 Protein Homology CDS 266201 266959 . + 0 ID=cds-WP_000947413.1;Parent=gene-CCO46_RS07255;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=CCO46_RS07255;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 266972 267829 . + . ID=gene-CCO46_RS07260;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=CCO46_RS07260;old_locus_tag=CCO46_07260 NZ_NPOH01000004.1 Protein Homology CDS 266972 267829 . + 0 ID=cds-WP_094887748.1;Parent=gene-CCO46_RS07260;Dbxref=GenBank:WP_094887748.1;Name=WP_094887748.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=CCO46_RS07260;product=phosphatidate cytidylyltransferase;protein_id=WP_094887748.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 267841 269193 . + . ID=gene-CCO46_RS07265;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CCO46_RS07265;old_locus_tag=CCO46_07265 NZ_NPOH01000004.1 Protein Homology CDS 267841 269193 . + 0 ID=cds-WP_000949017.1;Parent=gene-CCO46_RS07265;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=CCO46_RS07265;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 269225 271636 . + . ID=gene-CCO46_RS07270;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=CCO46_RS07270;old_locus_tag=CCO46_07270 NZ_NPOH01000004.1 Protein Homology CDS 269225 271636 . + 0 ID=cds-WP_001240922.1;Parent=gene-CCO46_RS07270;Dbxref=GenBank:WP_001240922.1;Name=WP_001240922.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=CCO46_RS07270;product=outer membrane protein assembly factor BamA;protein_id=WP_001240922.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 271759 272244 . + . ID=gene-CCO46_RS07275;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=CCO46_RS07275;old_locus_tag=CCO46_07275 NZ_NPOH01000004.1 Protein Homology CDS 271759 272244 . + 0 ID=cds-WP_000758966.1;Parent=gene-CCO46_RS07275;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=CCO46_RS07275;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 272248 273273 . + . ID=gene-CCO46_RS07280;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=CCO46_RS07280;old_locus_tag=CCO46_07280 NZ_NPOH01000004.1 Protein Homology CDS 272248 273273 . + 0 ID=cds-WP_001139266.1;Parent=gene-CCO46_RS07280;Dbxref=GenBank:WP_001139266.1;Name=WP_001139266.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=CCO46_RS07280;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139266.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 273379 273834 . + . ID=gene-CCO46_RS07285;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CCO46_RS07285;old_locus_tag=CCO46_07285 NZ_NPOH01000004.1 Protein Homology CDS 273379 273834 . + 0 ID=cds-WP_000210741.1;Parent=gene-CCO46_RS07285;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=CCO46_RS07285;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 273838 274626 . + . ID=gene-CCO46_RS07290;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=CCO46_RS07290;old_locus_tag=CCO46_07290 NZ_NPOH01000004.1 Protein Homology CDS 273838 274626 . + 0 ID=cds-WP_000565950.1;Parent=gene-CCO46_RS07290;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=CCO46_RS07290;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 274626 275774 . + . ID=gene-CCO46_RS07295;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=CCO46_RS07295;old_locus_tag=CCO46_07295 NZ_NPOH01000004.1 Protein Homology CDS 274626 275774 . + 0 ID=cds-WP_000741216.1;Parent=gene-CCO46_RS07295;Dbxref=GenBank:WP_000741216.1;Name=WP_000741216.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=CCO46_RS07295;product=lipid-A-disaccharide synthase;protein_id=WP_000741216.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 275771 276367 . + . ID=gene-CCO46_RS07300;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=CCO46_RS07300;old_locus_tag=CCO46_07300 NZ_NPOH01000004.1 Protein Homology CDS 275771 276367 . + 0 ID=cds-WP_000569411.1;Parent=gene-CCO46_RS07300;Dbxref=GenBank:WP_000569411.1;Name=WP_000569411.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=CCO46_RS07300;product=ribonuclease HII;protein_id=WP_000569411.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 276391 279873 . + . ID=gene-CCO46_RS07305;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=CCO46_RS07305;old_locus_tag=CCO46_07305 NZ_NPOH01000004.1 Protein Homology CDS 276391 279873 . + 0 ID=cds-WP_001294817.1;Parent=gene-CCO46_RS07305;Dbxref=GenBank:WP_001294817.1;Name=WP_001294817.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=CCO46_RS07305;product=DNA polymerase III subunit alpha;protein_id=WP_001294817.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 279886 280845 . + . ID=gene-CCO46_RS07310;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=CCO46_RS07310;old_locus_tag=CCO46_07310 NZ_NPOH01000004.1 Protein Homology CDS 279886 280845 . + 0 ID=cds-WP_000055753.1;Parent=gene-CCO46_RS07310;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=CCO46_RS07310;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 281023 282786 . + . ID=gene-CCO46_RS07315;Name=CCO46_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07315;old_locus_tag=CCO46_07315 NZ_NPOH01000004.1 Protein Homology CDS 281023 282786 . + 0 ID=cds-WP_000524168.1;Parent=gene-CCO46_RS07315;Dbxref=GenBank:WP_000524168.1;Name=WP_000524168.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=CCO46_RS07315;product=chitinase;protein_id=WP_000524168.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 282862 285003 . + . ID=gene-CCO46_RS07320;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=CCO46_RS07320;old_locus_tag=CCO46_07320 NZ_NPOH01000004.1 Protein Homology CDS 282862 285003 . + 0 ID=cds-WP_001021051.1;Parent=gene-CCO46_RS07320;Dbxref=GenBank:WP_001021051.1;Name=WP_001021051.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=CCO46_RS07320;product=lysine decarboxylase LdcC;protein_id=WP_001021051.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 285059 285448 . + . ID=gene-CCO46_RS07325;Name=CCO46_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07325;old_locus_tag=CCO46_07325 NZ_NPOH01000004.1 Protein Homology CDS 285059 285448 . + 0 ID=cds-WP_000901086.1;Parent=gene-CCO46_RS07325;Dbxref=GenBank:WP_000901086.1;Name=WP_000901086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=CCO46_RS07325;product=VOC family protein;protein_id=WP_000901086.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 285511 286803 . + . ID=gene-CCO46_RS07330;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CCO46_RS07330;old_locus_tag=CCO46_07330 NZ_NPOH01000004.1 Protein Homology CDS 285511 286803 . + 0 ID=cds-WP_000210046.1;Parent=gene-CCO46_RS07330;Dbxref=GenBank:WP_000210046.1;Name=WP_000210046.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=CCO46_RS07330;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000210046.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 286887 287147 . - . ID=gene-CCO46_RS07335;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=CCO46_RS07335;old_locus_tag=CCO46_07335 NZ_NPOH01000004.1 Protein Homology CDS 286887 287147 . - 0 ID=cds-WP_000062330.1;Parent=gene-CCO46_RS07335;Dbxref=GenBank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=CCO46_RS07335;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 287134 287334 . - . ID=gene-CCO46_RS07340;Name=CCO46_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07340;old_locus_tag=CCO46_07340 NZ_NPOH01000004.1 Protein Homology CDS 287134 287334 . - 0 ID=cds-WP_001518678.1;Parent=gene-CCO46_RS07340;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=CCO46_RS07340;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 287532 288077 . + . ID=gene-CCO46_RS07345;Name=CCO46_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07345;old_locus_tag=CCO46_07345 NZ_NPOH01000004.1 Protein Homology CDS 287532 288077 . + 0 ID=cds-WP_001185319.1;Parent=gene-CCO46_RS07345;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=CCO46_RS07345;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 288074 288496 . + . ID=gene-CCO46_RS07350;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=CCO46_RS07350;old_locus_tag=CCO46_07350 NZ_NPOH01000004.1 Protein Homology CDS 288074 288496 . + 0 ID=cds-WP_000560527.1;Parent=gene-CCO46_RS07350;Dbxref=GenBank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=CCO46_RS07350;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 288528 289229 . + . ID=gene-CCO46_RS07355;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=CCO46_RS07355;old_locus_tag=CCO46_07355 NZ_NPOH01000004.1 Protein Homology CDS 288528 289229 . + 0 ID=cds-WP_000252576.1;Parent=gene-CCO46_RS07355;Dbxref=GenBank:WP_000252576.1;Name=WP_000252576.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=CCO46_RS07355;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252576.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 289303 291021 . - . ID=gene-CCO46_RS07360;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=CCO46_RS07360;old_locus_tag=CCO46_07360 NZ_NPOH01000004.1 Protein Homology CDS 289303 291021 . - 0 ID=cds-WP_001260683.1;Parent=gene-CCO46_RS07360;Dbxref=GenBank:WP_001260683.1;Name=WP_001260683.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=CCO46_RS07360;product=proline--tRNA ligase;protein_id=WP_001260683.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 291132 291839 . - . ID=gene-CCO46_RS07365;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=CCO46_RS07365;old_locus_tag=CCO46_07365 NZ_NPOH01000004.1 Protein Homology CDS 291132 291839 . - 0 ID=cds-WP_000093988.1;Parent=gene-CCO46_RS07365;Dbxref=GenBank:WP_000093988.1;Name=WP_000093988.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=CCO46_RS07365;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093988.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 291836 292240 . - . ID=gene-CCO46_RS07370;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=CCO46_RS07370;old_locus_tag=CCO46_07370 NZ_NPOH01000004.1 Protein Homology CDS 291836 292240 . - 0 ID=cds-WP_001202315.1;Parent=gene-CCO46_RS07370;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=CCO46_RS07370;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 292359 293174 . - . ID=gene-CCO46_RS07375;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=CCO46_RS07375;old_locus_tag=CCO46_07375 NZ_NPOH01000004.1 Protein Homology CDS 292359 293174 . - 0 ID=cds-WP_000874215.1;Parent=gene-CCO46_RS07375;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=CCO46_RS07375;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 293213 293866 . - . ID=gene-CCO46_RS07380;Name=CCO46_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07380;old_locus_tag=CCO46_07380 NZ_NPOH01000004.1 Protein Homology CDS 293213 293866 . - 0 ID=cds-WP_001287486.1;Parent=gene-CCO46_RS07380;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=CCO46_RS07380;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 293859 294890 . - . ID=gene-CCO46_RS07385;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=CCO46_RS07385;old_locus_tag=CCO46_07385 NZ_NPOH01000004.1 Protein Homology CDS 293859 294890 . - 0 ID=cds-WP_000594018.1;Parent=gene-CCO46_RS07385;Dbxref=GenBank:WP_000594018.1;Name=WP_000594018.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=CCO46_RS07385;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594018.1;transl_table=11 NZ_NPOH01000004.1 RefSeq gene 295080 295646 . + . ID=gene-CCO46_RS07390;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=CCO46_RS07390;old_locus_tag=CCO46_07390 NZ_NPOH01000004.1 Protein Homology CDS 295080 295646 . + 0 ID=cds-WP_001140158.1;Parent=gene-CCO46_RS07390;Dbxref=GenBank:WP_001140158.1;Name=WP_001140158.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=CCO46_RS07390;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140158.1;transl_table=11 ##sequence-region NZ_NPOH01000040.1 1 5253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000040.1 RefSeq region 1 5253 . + . ID=NZ_NPOH01000040.1:1..5253;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000040.1 RefSeq gene 5 120 . - . ID=gene-CCO46_RS24735;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO46_RS24735;old_locus_tag=CCO46_24725 NZ_NPOH01000040.1 cmsearch rRNA 5 120 . - . ID=rna-CCO46_RS24735;Parent=gene-CCO46_RS24735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS24735;product=5S ribosomal RNA NZ_NPOH01000040.1 cmsearch exon 5 120 . - . ID=exon-CCO46_RS24735-1;Parent=rna-CCO46_RS24735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS24735;product=5S ribosomal RNA NZ_NPOH01000040.1 RefSeq gene 214 3120 . - . ID=gene-CCO46_RS24740;Name=CCO46_RS24740;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO46_RS24740;old_locus_tag=CCO46_24730 NZ_NPOH01000040.1 cmsearch rRNA 214 3120 . - . ID=rna-CCO46_RS24740;Parent=gene-CCO46_RS24740;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS24740;product=23S ribosomal RNA NZ_NPOH01000040.1 cmsearch exon 214 3120 . - . ID=exon-CCO46_RS24740-1;Parent=rna-CCO46_RS24740;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS24740;product=23S ribosomal RNA NZ_NPOH01000040.1 RefSeq gene 3303 3378 . - . ID=gene-CCO46_RS24745;Name=CCO46_RS24745;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24745;old_locus_tag=CCO46_24735 NZ_NPOH01000040.1 tRNAscan-SE tRNA 3303 3378 . - . ID=rna-CCO46_RS24745;Parent=gene-CCO46_RS24745;anticodon=(pos:complement(3343..3345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24745;product=tRNA-Ala NZ_NPOH01000040.1 tRNAscan-SE exon 3303 3378 . - . ID=exon-CCO46_RS24745-1;Parent=rna-CCO46_RS24745;anticodon=(pos:complement(3343..3345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24745;product=tRNA-Ala NZ_NPOH01000040.1 RefSeq gene 3488 3564 . - . ID=gene-CCO46_RS24750;Name=CCO46_RS24750;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS24750;old_locus_tag=CCO46_24740 NZ_NPOH01000040.1 tRNAscan-SE tRNA 3488 3564 . - . ID=rna-CCO46_RS24750;Parent=gene-CCO46_RS24750;anticodon=(pos:complement(3528..3530));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24750;product=tRNA-Ile NZ_NPOH01000040.1 tRNAscan-SE exon 3488 3564 . - . ID=exon-CCO46_RS24750-1;Parent=rna-CCO46_RS24750;anticodon=(pos:complement(3528..3530));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS24750;product=tRNA-Ile NZ_NPOH01000040.1 RefSeq gene 3634 5175 . - . ID=gene-CCO46_RS24755;Name=CCO46_RS24755;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO46_RS24755;old_locus_tag=CCO46_24745 NZ_NPOH01000040.1 cmsearch rRNA 3634 5175 . - . ID=rna-CCO46_RS24755;Parent=gene-CCO46_RS24755;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS24755;product=16S ribosomal RNA NZ_NPOH01000040.1 cmsearch exon 3634 5175 . - . ID=exon-CCO46_RS24755-1;Parent=rna-CCO46_RS24755;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS24755;product=16S ribosomal RNA ##sequence-region NZ_NPOH01000041.1 1 3876 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000041.1 RefSeq region 1 3876 . + . ID=NZ_NPOH01000041.1:1..3876;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000041.1 RefSeq gene 1 636 . + . ID=gene-CCO46_RS24760;Name=CCO46_RS24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24760;old_locus_tag=CCO46_24750;partial=true;start_range=.,1 NZ_NPOH01000041.1 Protein Homology CDS 1 636 . + 0 ID=cds-WP_336603389.1;Parent=gene-CCO46_RS24760;Dbxref=GenBank:WP_336603389.1;Name=WP_336603389.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=CCO46_RS24760;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_336603389.1;start_range=.,1;transl_table=11 NZ_NPOH01000041.1 RefSeq gene 660 1106 . + . ID=gene-CCO46_RS24765;Name=CCO46_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24765;old_locus_tag=CCO46_24755 NZ_NPOH01000041.1 Protein Homology CDS 660 1106 . + 0 ID=cds-WP_000375832.1;Parent=gene-CCO46_RS24765;Dbxref=GenBank:WP_000375832.1;Name=WP_000375832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459288.1;locus_tag=CCO46_RS24765;product=DcrB-related protein;protein_id=WP_000375832.1;transl_table=11 NZ_NPOH01000041.1 RefSeq gene 1125 3876 . + . ID=gene-CCO46_RS24770;Name=CCO46_RS24770;end_range=3876,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24770;old_locus_tag=CCO46_24760;partial=true NZ_NPOH01000041.1 Protein Homology CDS 1125 3876 . + 0 ID=cds-WP_097363534.1;Parent=gene-CCO46_RS24770;Dbxref=GenBank:WP_097363534.1;Name=WP_097363534.1;end_range=3876,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO46_RS24770;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_097363534.1;transl_table=11 ##sequence-region NZ_NPOH01000042.1 1 3500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000042.1 RefSeq region 1 3500 . + . ID=NZ_NPOH01000042.1:1..3500;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000042.1 RefSeq gene 393 584 . - . ID=gene-CCO46_RS24775;Name=CCO46_RS24775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24775;old_locus_tag=CCO46_24765 NZ_NPOH01000042.1 Protein Homology CDS 393 584 . - 0 ID=cds-WP_000165979.1;Parent=gene-CCO46_RS24775;Dbxref=GenBank:WP_000165979.1;Name=WP_000165979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165979.1;locus_tag=CCO46_RS24775;product=Rop family plasmid primer RNA-binding protein;protein_id=WP_000165979.1;transl_table=11 NZ_NPOH01000042.1 RefSeq gene 648 971 . + . ID=gene-CCO46_RS24780;Name=CCO46_RS24780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24780;old_locus_tag=CCO46_24770 NZ_NPOH01000042.1 Protein Homology CDS 648 971 . + 0 ID=cds-WP_001696562.1;Parent=gene-CCO46_RS24780;Dbxref=GenBank:WP_001696562.1;Name=WP_001696562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956000.1;locus_tag=CCO46_RS24780;product=MobC family plasmid mobilization relaxosome protein;protein_id=WP_001696562.1;transl_table=11 NZ_NPOH01000042.1 RefSeq pseudogene 961 1278 . + . ID=gene-CCO46_RS25970;Name=CCO46_RS25970;end_range=1278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25970;partial=true;pseudo=true NZ_NPOH01000042.1 Protein Homology CDS 961 1278 . + 0 ID=cds-CCO46_RS25970;Parent=gene-CCO46_RS25970;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1278,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015397.6;locus_tag=CCO46_RS25970;partial=true;product=plasmid mobilization relaxase MbeA;pseudo=true;transl_table=11 NZ_NPOH01000042.1 RefSeq gene 1649 2209 . + . ID=gene-CCO46_RS25145;Name=CCO46_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25145 NZ_NPOH01000042.1 Protein Homology CDS 1649 2209 . + 0 ID=cds-WP_000067486.1;Parent=gene-CCO46_RS25145;Dbxref=GenBank:WP_000067486.1;Name=WP_000067486.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016710.6;locus_tag=CCO46_RS25145;product=MbeB family mobilization protein;protein_id=WP_000067486.1;transl_table=11 NZ_NPOH01000042.1 RefSeq gene 2216 2449 . + . ID=gene-CCO46_RS25150;Name=CCO46_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25150 NZ_NPOH01000042.1 Protein Homology CDS 2216 2449 . + 0 ID=cds-WP_140439326.1;Parent=gene-CCO46_RS25150;Dbxref=GenBank:WP_140439326.1;Name=WP_140439326.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016769.6;locus_tag=CCO46_RS25150;product=MbeD family mobilization/exclusion protein;protein_id=WP_140439326.1;transl_table=11 ##sequence-region NZ_NPOH01000043.1 1 2686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000043.1 RefSeq region 1 2686 . + . ID=NZ_NPOH01000043.1:1..2686;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000043.1 RefSeq gene 1 518 . + . ID=gene-CCO46_RS24795;Name=CCO46_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24795;old_locus_tag=CCO46_24785;partial=true;start_range=.,1 NZ_NPOH01000043.1 Protein Homology CDS 1 518 . + 2 ID=cds-WP_201792753.1;Parent=gene-CCO46_RS24795;Dbxref=GenBank:WP_201792753.1;Name=WP_201792753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272669.1;locus_tag=CCO46_RS24795;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_201792753.1;start_range=.,1;transl_table=11 NZ_NPOH01000043.1 RefSeq gene 518 955 . + . ID=gene-CCO46_RS24800;Name=CCO46_RS24800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24800;old_locus_tag=CCO46_24790 NZ_NPOH01000043.1 Protein Homology CDS 518 955 . + 0 ID=cds-WP_001751019.1;Parent=gene-CCO46_RS24800;Dbxref=GenBank:WP_001751019.1;Name=WP_001751019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000870136.1;locus_tag=CCO46_RS24800;product=hypothetical protein;protein_id=WP_001751019.1;transl_table=11 NZ_NPOH01000043.1 RefSeq pseudogene 1074 1363 . + . ID=gene-CCO46_RS25655;Name=CCO46_RS25655;end_range=1363,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25655;old_locus_tag=CCO46_24800;partial=true;pseudo=true;start_range=.,1074 NZ_NPOH01000043.1 Protein Homology CDS 1074 1363 . + 0 ID=cds-CCO46_RS25655;Parent=gene-CCO46_RS25655;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO46_RS25655;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1074;transl_table=11 NZ_NPOH01000043.1 RefSeq gene 1705 2589 . + . ID=gene-CCO46_RS24815;Name=CCO46_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24815;old_locus_tag=CCO46_24805 NZ_NPOH01000043.1 GeneMarkS-2+ CDS 1705 2589 . + 0 ID=cds-WP_039591696.1;Parent=gene-CCO46_RS24815;Dbxref=GenBank:WP_039591696.1;Name=WP_039591696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS24815;product=hypothetical protein;protein_id=WP_039591696.1;transl_table=11 NZ_NPOH01000043.1 RefSeq pseudogene 2561 2686 . + . ID=gene-CCO46_RS24820;Name=CCO46_RS24820;end_range=2686,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24820;old_locus_tag=CCO46_24810;partial=true;pseudo=true;start_range=.,2561 NZ_NPOH01000043.1 Protein Homology CDS 2561 2686 . + 0 ID=cds-CCO46_RS24820;Parent=gene-CCO46_RS24820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2686,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO46_RS24820;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2561;transl_table=11 ##sequence-region NZ_NPOH01000044.1 1 2599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000044.1 RefSeq region 1 2599 . + . ID=NZ_NPOH01000044.1:1..2599;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000044.1 RefSeq gene 1 702 . - . ID=gene-CCO46_RS24825;Name=CCO46_RS24825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24825;old_locus_tag=CCO46_24815;partial=true;start_range=.,1 NZ_NPOH01000044.1 Protein Homology CDS 1 702 . - 0 ID=cds-WP_140439328.1;Parent=gene-CCO46_RS24825;Dbxref=GenBank:WP_140439328.1;Name=WP_140439328.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO46_RS24825;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_140439328.1;start_range=.,1;transl_table=11 NZ_NPOH01000044.1 RefSeq gene 715 2490 . - . ID=gene-CCO46_RS24830;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO46_RS24830;old_locus_tag=CCO46_24820 NZ_NPOH01000044.1 Protein Homology CDS 715 2490 . - 0 ID=cds-WP_097363537.1;Parent=gene-CCO46_RS24830;Dbxref=GenBank:WP_097363537.1;Name=WP_097363537.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO46_RS24830;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_097363537.1;transl_table=11 NZ_NPOH01000044.1 RefSeq pseudogene 2506 2599 . - . ID=gene-CCO46_RS24835;Name=CCO46_RS24835;end_range=2599,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24835;old_locus_tag=CCO46_24825;partial=true;pseudo=true NZ_NPOH01000044.1 Protein Homology CDS 2506 2599 . - 1 ID=cds-CCO46_RS24835;Parent=gene-CCO46_RS24835;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2599,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=CCO46_RS24835;partial=true;product=oxaloacetate decarboxylase subunit gamma;pseudo=true;transl_table=11 ##sequence-region NZ_NPOH01000045.1 1 1655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000045.1 RefSeq region 1 1655 . + . ID=NZ_NPOH01000045.1:1..1655;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000045.1 RefSeq gene 1 1211 . + . ID=gene-CCO46_RS24840;Name=CCO46_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24840;old_locus_tag=CCO46_24830;partial=true;start_range=.,1 NZ_NPOH01000045.1 Protein Homology CDS 1 1211 . + 2 ID=cds-WP_140439329.1;Parent=gene-CCO46_RS24840;Dbxref=GenBank:WP_140439329.1;Name=WP_140439329.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO46_RS24840;partial=true;product=pyruvate carboxylase subunit B;protein_id=WP_140439329.1;start_range=.,1;transl_table=11 NZ_NPOH01000045.1 RefSeq gene 1227 1655 . + . ID=gene-CCO46_RS24845;Name=CCO46_RS24845;end_range=1655,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24845;old_locus_tag=CCO46_24835;partial=true NZ_NPOH01000045.1 Protein Homology CDS 1227 1655 . + 0 ID=cds-WP_170824464.1;Parent=gene-CCO46_RS24845;Dbxref=GenBank:WP_170824464.1;Name=WP_170824464.1;Ontology_term=GO:0006814,GO:0016829;end_range=1655,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO46_RS24845;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_170824464.1;transl_table=11 ##sequence-region NZ_NPOH01000046.1 1 1448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000046.1 RefSeq region 1 1448 . + . ID=NZ_NPOH01000046.1:1..1448;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000046.1 RefSeq gene 75 1388 . + . ID=gene-CCO46_RS24850;Name=CCO46_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24850;old_locus_tag=CCO46_24840 NZ_NPOH01000046.1 Protein Homology CDS 75 1388 . + 0 ID=cds-WP_024146079.1;Parent=gene-CCO46_RS24850;Dbxref=GenBank:WP_024146079.1;Name=WP_024146079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196353.1;locus_tag=CCO46_RS24850;product=ISNCY family transposase;protein_id=WP_024146079.1;transl_table=11 ##sequence-region NZ_NPOH01000047.1 1 860 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000047.1 RefSeq region 1 860 . + . ID=NZ_NPOH01000047.1:1..860;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000047.1 RefSeq gene 1 860 . - . ID=gene-CCO46_RS24855;Name=tuf;end_range=860,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CCO46_RS24855;old_locus_tag=CCO46_24845;partial=true;start_range=.,1 NZ_NPOH01000047.1 Protein Homology CDS 1 860 . - 0 ID=cds-WP_031608269.1;Parent=gene-CCO46_RS24855;Dbxref=GenBank:WP_031608269.1;Name=WP_031608269.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=860,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=CCO46_RS24855;partial=true;product=elongation factor Tu;protein_id=WP_031608269.1;start_range=.,1;transl_table=11 ##sequence-region NZ_NPOH01000048.1 1 820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000048.1 RefSeq region 1 820 . + . ID=NZ_NPOH01000048.1:1..820;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000048.1 RefSeq gene 64 768 . + . ID=gene-CCO46_RS24860;Name=CCO46_RS24860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS24860;old_locus_tag=CCO46_24850 NZ_NPOH01000048.1 Protein Homology CDS 64 768 . + 0 ID=cds-WP_001067858.1;Parent=gene-CCO46_RS24860;Dbxref=GenBank:WP_001067858.1;Name=WP_001067858.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=CCO46_RS24860;product=IS6-like element IS26 family transposase;protein_id=WP_001067858.1;transl_table=11 ##sequence-region NZ_NPOH01000005.1 1 295553 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000005.1 RefSeq region 1 295553 . + . ID=NZ_NPOH01000005.1:1..295553;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000005.1 RefSeq gene 1 110 . - . ID=gene-CCO46_RS07395;Name=CCO46_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07395;old_locus_tag=CCO46_07395;partial=true;start_range=.,1 NZ_NPOH01000005.1 Protein Homology CDS 1 110 . - 0 ID=cds-WP_044857835.1;Parent=gene-CCO46_RS07395;Dbxref=GenBank:WP_044857835.1;Name=WP_044857835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO46_RS07395;partial=true;product=4Fe-4S binding protein;protein_id=WP_044857835.1;start_range=.,1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 121 2556 . - . ID=gene-CCO46_RS07400;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=CCO46_RS07400;old_locus_tag=CCO46_07400 NZ_NPOH01000005.1 Protein Homology CDS 121 2556 . - 0 ID=cds-WP_058331510.1;Parent=gene-CCO46_RS07400;Dbxref=GenBank:WP_058331510.1;Name=WP_058331510.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=CCO46_RS07400;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_058331510.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 2655 5093 . - . ID=gene-CCO46_RS07405;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=CCO46_RS07405;old_locus_tag=CCO46_07405 NZ_NPOH01000005.1 Protein Homology CDS 2655 5093 . - 0 ID=cds-WP_058331509.1;Parent=gene-CCO46_RS07405;Dbxref=GenBank:WP_058331509.1;Name=WP_058331509.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=CCO46_RS07405;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_058331509.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 5250 5558 . - . ID=gene-CCO46_RS07410;Name=CCO46_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07410;old_locus_tag=CCO46_07410 NZ_NPOH01000005.1 Protein Homology CDS 5250 5558 . - 0 ID=cds-WP_000975516.1;Parent=gene-CCO46_RS07410;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=CCO46_RS07410;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 5662 6372 . + . ID=gene-CCO46_RS07415;Name=CCO46_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07415;old_locus_tag=CCO46_07415 NZ_NPOH01000005.1 Protein Homology CDS 5662 6372 . + 0 ID=cds-WP_000743119.1;Parent=gene-CCO46_RS07415;Dbxref=GenBank:WP_000743119.1;Name=WP_000743119.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=CCO46_RS07415;product=YnfC family lipoprotein;protein_id=WP_000743119.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 6413 6973 . - . ID=gene-CCO46_RS07420;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=CCO46_RS07420;old_locus_tag=CCO46_07420 NZ_NPOH01000005.1 Protein Homology CDS 6413 6973 . - 0 ID=cds-WP_000199997.1;Parent=gene-CCO46_RS07420;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=CCO46_RS07420;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 7009 7350 . - . ID=gene-CCO46_RS07425;Name=CCO46_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07425;old_locus_tag=CCO46_07425 NZ_NPOH01000005.1 Protein Homology CDS 7009 7350 . - 0 ID=cds-WP_001066440.1;Parent=gene-CCO46_RS07425;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=CCO46_RS07425;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 7503 7829 . + . ID=gene-CCO46_RS07430;Name=CCO46_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07430;old_locus_tag=CCO46_07430 NZ_NPOH01000005.1 Protein Homology CDS 7503 7829 . + 0 ID=cds-WP_000921389.1;Parent=gene-CCO46_RS07430;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=CCO46_RS07430;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 7950 9164 . + . ID=gene-CCO46_RS07435;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=CCO46_RS07435;old_locus_tag=CCO46_07435 NZ_NPOH01000005.1 Protein Homology CDS 7950 9164 . + 0 ID=cds-WP_000706264.1;Parent=gene-CCO46_RS07435;Dbxref=GenBank:WP_000706264.1;Name=WP_000706264.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=CCO46_RS07435;product=starvation-sensing protein RspA;protein_id=WP_000706264.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 9175 10194 . + . ID=gene-CCO46_RS07440;Name=CCO46_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07440;old_locus_tag=CCO46_07440 NZ_NPOH01000005.1 Protein Homology CDS 9175 10194 . + 0 ID=cds-WP_000836494.1;Parent=gene-CCO46_RS07440;Dbxref=GenBank:WP_000836494.1;Name=WP_000836494.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=CCO46_RS07440;product=Zn-dependent oxidoreductase;protein_id=WP_000836494.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 10248 11627 . + . ID=gene-CCO46_RS07445;Name=CCO46_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07445;old_locus_tag=CCO46_07445 NZ_NPOH01000005.1 Protein Homology CDS 10248 11627 . + 0 ID=cds-WP_000192118.1;Parent=gene-CCO46_RS07445;Dbxref=GenBank:WP_000192118.1;Name=WP_000192118.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=CCO46_RS07445;product=MFS transporter;protein_id=WP_000192118.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 11771 13237 . + . ID=gene-CCO46_RS07450;Name=CCO46_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07450;old_locus_tag=CCO46_07450 NZ_NPOH01000005.1 Protein Homology CDS 11771 13237 . + 0 ID=cds-WP_097363286.1;Parent=gene-CCO46_RS07450;Dbxref=GenBank:WP_097363286.1;Name=WP_097363286.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=CCO46_RS07450;product=mannitol dehydrogenase family protein;protein_id=WP_097363286.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 13304 13507 . - . ID=gene-CCO46_RS07455;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=CCO46_RS07455;old_locus_tag=CCO46_07455 NZ_NPOH01000005.1 Protein Homology CDS 13304 13507 . - 0 ID=cds-WP_000989267.1;Parent=gene-CCO46_RS07455;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=CCO46_RS07455;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 13688 14374 . - . ID=gene-CCO46_RS07460;Name=CCO46_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07460;old_locus_tag=CCO46_07460 NZ_NPOH01000005.1 Protein Homology CDS 13688 14374 . - 0 ID=cds-WP_023231932.1;Parent=gene-CCO46_RS07460;Dbxref=GenBank:WP_023231932.1;Name=WP_023231932.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=CCO46_RS07460;product=GntR family transcriptional regulator;protein_id=WP_023231932.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 14504 15250 . - . ID=gene-CCO46_RS07465;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=CCO46_RS07465;old_locus_tag=CCO46_07465 NZ_NPOH01000005.1 Protein Homology CDS 14504 15250 . - 0 ID=cds-WP_094887711.1;Parent=gene-CCO46_RS07465;Dbxref=GenBank:WP_094887711.1;Name=WP_094887711.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=CCO46_RS07465;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_094887711.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 15389 17431 . + . ID=gene-CCO46_RS07470;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=CCO46_RS07470;old_locus_tag=CCO46_07470 NZ_NPOH01000005.1 Protein Homology CDS 15389 17431 . + 0 ID=cds-WP_071653536.1;Parent=gene-CCO46_RS07470;Dbxref=GenBank:WP_071653536.1;Name=WP_071653536.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=CCO46_RS07470;product=peptidyl-dipeptidase Dcp;protein_id=WP_071653536.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 17776 17958 . + . ID=gene-CCO46_RS07480;Name=CCO46_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07480;old_locus_tag=CCO46_07480 NZ_NPOH01000005.1 Protein Homology CDS 17776 17958 . + 0 ID=cds-WP_000807642.1;Parent=gene-CCO46_RS07480;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=CCO46_RS07480;product=general stress protein;protein_id=WP_000807642.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 18077 18604 . - . ID=gene-CCO46_RS07485;Name=CCO46_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07485;old_locus_tag=CCO46_07485 NZ_NPOH01000005.1 Protein Homology CDS 18077 18604 . - 0 ID=cds-WP_001235357.1;Parent=gene-CCO46_RS07485;Dbxref=GenBank:WP_001235357.1;Name=WP_001235357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=CCO46_RS07485;product=2-oxo-tetronate isomerase;protein_id=WP_001235357.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 18988 19380 . + . ID=gene-CCO46_RS07490;Name=CCO46_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07490;old_locus_tag=CCO46_07490 NZ_NPOH01000005.1 Protein Homology CDS 18988 19380 . + 0 ID=cds-WP_000776348.1;Parent=gene-CCO46_RS07490;Dbxref=GenBank:WP_000776348.1;Name=WP_000776348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=CCO46_RS07490;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000776348.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 19727 19822 . - . ID=gene-CCO46_RS07495;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=CCO46_RS07495;old_locus_tag=CCO46_07495 NZ_NPOH01000005.1 Protein Homology CDS 19727 19822 . - 0 ID=cds-WP_000901531.1;Parent=gene-CCO46_RS07495;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=CCO46_RS07495;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 20070 21257 . - . ID=gene-CCO46_RS07500;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=CCO46_RS07500;old_locus_tag=CCO46_07500 NZ_NPOH01000005.1 Protein Homology CDS 20070 21257 . - 0 ID=cds-WP_094887709.1;Parent=gene-CCO46_RS07500;Dbxref=GenBank:WP_094887709.1;Name=WP_094887709.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=CCO46_RS07500;product=efflux MFS transporter YdeE;protein_id=WP_094887709.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 21485 22387 . + . ID=gene-CCO46_RS07505;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=CCO46_RS07505;old_locus_tag=CCO46_07505 NZ_NPOH01000005.1 Protein Homology CDS 21485 22387 . + 0 ID=cds-WP_094887708.1;Parent=gene-CCO46_RS07505;Dbxref=GenBank:WP_094887708.1;Name=WP_094887708.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=CCO46_RS07505;product=O-acetylserine/cysteine exporter;protein_id=WP_094887708.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 22468 22683 . - . ID=gene-CCO46_RS07510;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=CCO46_RS07510;old_locus_tag=CCO46_07510 NZ_NPOH01000005.1 Protein Homology CDS 22468 22683 . - 0 ID=cds-WP_094887707.1;Parent=gene-CCO46_RS07510;Dbxref=GenBank:WP_094887707.1;Name=WP_094887707.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=CCO46_RS07510;product=multiple antibiotic resistance protein MarB;protein_id=WP_094887707.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 22712 23095 . - . ID=gene-CCO46_RS07515;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=CCO46_RS07515;old_locus_tag=CCO46_07515 NZ_NPOH01000005.1 Protein Homology CDS 22712 23095 . - 0 ID=cds-WP_000091193.1;Parent=gene-CCO46_RS07515;Dbxref=GenBank:WP_000091193.1;Name=WP_000091193.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032424.1;locus_tag=CCO46_RS07515;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091193.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 23115 23549 . - . ID=gene-CCO46_RS07520;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=CCO46_RS07520;old_locus_tag=CCO46_07520 NZ_NPOH01000005.1 Protein Homology CDS 23115 23549 . - 0 ID=cds-WP_000843434.1;Parent=gene-CCO46_RS07520;Dbxref=GenBank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=CCO46_RS07520;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 23808 24473 . + . ID=gene-CCO46_RS07525;Name=CCO46_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07525;old_locus_tag=CCO46_07525 NZ_NPOH01000005.1 Protein Homology CDS 23808 24473 . + 0 ID=cds-WP_023220668.1;Parent=gene-CCO46_RS07525;Dbxref=GenBank:WP_023220668.1;Name=WP_023220668.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=CCO46_RS07525;product=MarC family NAAT transporter;protein_id=WP_023220668.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 24521 25711 . - . ID=gene-CCO46_RS07530;Name=CCO46_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07530;old_locus_tag=CCO46_07530 NZ_NPOH01000005.1 Protein Homology CDS 24521 25711 . - 0 ID=cds-WP_000154622.1;Parent=gene-CCO46_RS07530;Dbxref=GenBank:WP_000154622.1;Name=WP_000154622.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=CCO46_RS07530;product=sugar transporter;protein_id=WP_000154622.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 25827 26699 . - . ID=gene-CCO46_RS07535;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=CCO46_RS07535;old_locus_tag=CCO46_07535 NZ_NPOH01000005.1 Protein Homology CDS 25827 26699 . - 0 ID=cds-WP_000366539.1;Parent=gene-CCO46_RS07535;Dbxref=GenBank:WP_000366539.1;Name=WP_000366539.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=CCO46_RS07535;product=putrescine utilization regulator PtrR;protein_id=WP_000366539.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 26802 28190 . + . ID=gene-CCO46_RS07540;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=CCO46_RS07540;old_locus_tag=CCO46_07540 NZ_NPOH01000005.1 Protein Homology CDS 26802 28190 . + 0 ID=cds-WP_097363287.1;Parent=gene-CCO46_RS07540;Dbxref=GenBank:WP_097363287.1;Name=WP_097363287.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=CCO46_RS07540;product=succinate-semialdehyde dehydrogenase;protein_id=WP_097363287.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 28263 29189 . + . ID=gene-CCO46_RS07545;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=CCO46_RS07545;old_locus_tag=CCO46_07545 NZ_NPOH01000005.1 Protein Homology CDS 28263 29189 . + 0 ID=cds-WP_080108276.1;Parent=gene-CCO46_RS07545;Dbxref=GenBank:WP_080108276.1;Name=WP_080108276.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=CCO46_RS07545;product=glutaminase B;protein_id=WP_080108276.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 29189 29548 . + . ID=gene-CCO46_RS07550;Name=CCO46_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07550;old_locus_tag=CCO46_07550 NZ_NPOH01000005.1 Protein Homology CDS 29189 29548 . + 0 ID=cds-WP_000992449.1;Parent=gene-CCO46_RS07550;Dbxref=GenBank:WP_000992449.1;Name=WP_000992449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=CCO46_RS07550;product=DUF4186 domain-containing protein;protein_id=WP_000992449.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 29804 30718 . + . ID=gene-CCO46_RS07555;Name=CCO46_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07555;old_locus_tag=CCO46_07555 NZ_NPOH01000005.1 Protein Homology CDS 29804 30718 . + 0 ID=cds-WP_024134262.1;Parent=gene-CCO46_RS07555;Dbxref=GenBank:WP_024134262.1;Name=WP_024134262.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=CCO46_RS07555;product=bestrophin family protein;protein_id=WP_024134262.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 30774 31316 . - . ID=gene-CCO46_RS07560;Name=CCO46_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07560;old_locus_tag=CCO46_07560 NZ_NPOH01000005.1 Protein Homology CDS 30774 31316 . - 0 ID=cds-WP_000513126.1;Parent=gene-CCO46_RS07560;Dbxref=GenBank:WP_000513126.1;Name=WP_000513126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=CCO46_RS07560;product=YybH family protein;protein_id=WP_000513126.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 32033 33151 . + . ID=gene-CCO46_RS07565;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=CCO46_RS07565;old_locus_tag=CCO46_07565 NZ_NPOH01000005.1 Protein Homology CDS 32033 33151 . + 0 ID=cds-WP_097363288.1;Parent=gene-CCO46_RS07565;Dbxref=GenBank:WP_097363288.1;Name=WP_097363288.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=CCO46_RS07565;product=porin OmpC;protein_id=WP_097363288.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 33292 33633 . - . ID=gene-CCO46_RS07570;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO46_RS07570;old_locus_tag=CCO46_07570 NZ_NPOH01000005.1 Protein Homology CDS 33292 33633 . - 0 ID=cds-WP_000544772.1;Parent=gene-CCO46_RS07570;Dbxref=GenBank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=CCO46_RS07570;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 33646 34533 . - . ID=gene-CCO46_RS07575;Name=CCO46_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07575;old_locus_tag=CCO46_07575 NZ_NPOH01000005.1 Protein Homology CDS 33646 34533 . - 0 ID=cds-WP_001189403.1;Parent=gene-CCO46_RS07575;Dbxref=GenBank:WP_001189403.1;Name=WP_001189403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=CCO46_RS07575;product=hypothetical protein;protein_id=WP_001189403.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 34521 35582 . - . ID=gene-CCO46_RS07580;Name=CCO46_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07580;old_locus_tag=CCO46_07580 NZ_NPOH01000005.1 Protein Homology CDS 34521 35582 . - 0 ID=cds-WP_001016746.1;Parent=gene-CCO46_RS07580;Dbxref=GenBank:WP_001016746.1;Name=WP_001016746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=CCO46_RS07580;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_001016746.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 35600 36010 . - . ID=gene-CCO46_RS07585;Name=CCO46_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07585;old_locus_tag=CCO46_07585 NZ_NPOH01000005.1 Protein Homology CDS 35600 36010 . - 0 ID=cds-WP_000155986.1;Parent=gene-CCO46_RS07585;Dbxref=GenBank:WP_000155986.1;Name=WP_000155986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=CCO46_RS07585;product=hydrogenase;protein_id=WP_000155986.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 36007 36306 . - . ID=gene-CCO46_RS07590;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO46_RS07590;old_locus_tag=CCO46_07590 NZ_NPOH01000005.1 Protein Homology CDS 36007 36306 . - 0 ID=cds-WP_000334910.1;Parent=gene-CCO46_RS07590;Dbxref=GenBank:WP_000334910.1;Name=WP_000334910.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=CCO46_RS07590;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334910.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 36306 36914 . - . ID=gene-CCO46_RS07595;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=CCO46_RS07595;old_locus_tag=CCO46_07595 NZ_NPOH01000005.1 Protein Homology CDS 36306 36914 . - 0 ID=cds-WP_000852664.1;Parent=gene-CCO46_RS07595;Dbxref=GenBank:WP_000852664.1;Name=WP_000852664.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=CCO46_RS07595;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852664.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 36920 37663 . - . ID=gene-CCO46_RS07600;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=CCO46_RS07600;old_locus_tag=CCO46_07600 NZ_NPOH01000005.1 Protein Homology CDS 36920 37663 . - 0 ID=cds-WP_000924456.1;Parent=gene-CCO46_RS07600;Dbxref=GenBank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=CCO46_RS07600;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 37614 39416 . - . ID=gene-CCO46_RS07605;Name=CCO46_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07605;old_locus_tag=CCO46_07605 NZ_NPOH01000005.1 Protein Homology CDS 37614 39416 . - 0 ID=cds-WP_058331507.1;Parent=gene-CCO46_RS07605;Dbxref=GenBank:WP_058331507.1;Name=WP_058331507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=CCO46_RS07605;product=nickel-dependent hydrogenase large subunit;protein_id=WP_058331507.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 39419 40522 . - . ID=gene-CCO46_RS07610;Name=CCO46_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07610;old_locus_tag=CCO46_07610 NZ_NPOH01000005.1 Protein Homology CDS 39419 40522 . - 0 ID=cds-WP_001194448.1;Parent=gene-CCO46_RS07610;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=CCO46_RS07610;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 40940 42031 . + . ID=gene-CCO46_RS07615;Name=CCO46_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07615;old_locus_tag=CCO46_07615 NZ_NPOH01000005.1 Protein Homology CDS 40940 42031 . + 0 ID=cds-WP_094887706.1;Parent=gene-CCO46_RS07615;Dbxref=GenBank:WP_094887706.1;Name=WP_094887706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=CCO46_RS07615;product=choloylglycine hydrolase family protein;protein_id=WP_094887706.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 42077 42868 . + . ID=gene-CCO46_RS07620;Name=CCO46_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07620;old_locus_tag=CCO46_07620 NZ_NPOH01000005.1 Protein Homology CDS 42077 42868 . + 0 ID=cds-WP_001518759.1;Parent=gene-CCO46_RS07620;Dbxref=GenBank:WP_001518759.1;Name=WP_001518759.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=CCO46_RS07620;product=FadR/GntR family transcriptional regulator;protein_id=WP_001518759.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 42927 43952 . - . ID=gene-CCO46_RS07625;Name=CCO46_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07625;old_locus_tag=CCO46_07625 NZ_NPOH01000005.1 Protein Homology CDS 42927 43952 . - 0 ID=cds-WP_000864935.1;Parent=gene-CCO46_RS07625;Dbxref=GenBank:WP_000864935.1;Name=WP_000864935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=CCO46_RS07625;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864935.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 43927 45213 . - . ID=gene-CCO46_RS07630;Name=CCO46_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07630;old_locus_tag=CCO46_07630 NZ_NPOH01000005.1 Protein Homology CDS 43927 45213 . - 0 ID=cds-WP_000824240.1;Parent=gene-CCO46_RS07630;Dbxref=GenBank:WP_000824240.1;Name=WP_000824240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=CCO46_RS07630;product=MFS transporter;protein_id=WP_000824240.1;transl_table=11 NZ_NPOH01000005.1 RefSeq pseudogene 45390 46392 . - . ID=gene-CCO46_RS25435;Name=CCO46_RS25435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25435;old_locus_tag=CCO46_07635;pseudo=true NZ_NPOH01000005.1 Protein Homology CDS 45390 46392 . - 0 ID=cds-CCO46_RS25435;Parent=gene-CCO46_RS25435;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=CCO46_RS25435;product=PhoPQ-activated protein PqaA family protein;pseudo=true;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 46462 47703 . - . ID=gene-CCO46_RS07640;Name=CCO46_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07640;old_locus_tag=CCO46_07640 NZ_NPOH01000005.1 Protein Homology CDS 46462 47703 . - 0 ID=cds-WP_058331504.1;Parent=gene-CCO46_RS07640;Dbxref=GenBank:WP_058331504.1;Name=WP_058331504.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=CCO46_RS07640;product=MFS transporter;protein_id=WP_058331504.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 47693 49201 . - . ID=gene-CCO46_RS07645;Name=CCO46_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07645;old_locus_tag=CCO46_07645 NZ_NPOH01000005.1 Protein Homology CDS 47693 49201 . - 0 ID=cds-WP_023202459.1;Parent=gene-CCO46_RS07645;Dbxref=GenBank:WP_023202459.1;Name=WP_023202459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=CCO46_RS07645;product=FAD-dependent oxidoreductase;protein_id=WP_023202459.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 49246 49734 . + . ID=gene-CCO46_RS07650;Name=CCO46_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07650;old_locus_tag=CCO46_07650 NZ_NPOH01000005.1 Protein Homology CDS 49246 49734 . + 0 ID=cds-WP_001293634.1;Parent=gene-CCO46_RS07650;Dbxref=GenBank:WP_001293634.1;Name=WP_001293634.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=CCO46_RS07650;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293634.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 49927 51006 . + . ID=gene-CCO46_RS07655;Name=CCO46_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07655;old_locus_tag=CCO46_07655 NZ_NPOH01000005.1 Protein Homology CDS 49927 51006 . + 0 ID=cds-WP_097363289.1;Parent=gene-CCO46_RS07655;Dbxref=GenBank:WP_097363289.1;Name=WP_097363289.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=CCO46_RS07655;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_097363289.1;transl_table=11 NZ_NPOH01000005.1 RefSeq pseudogene 51054 51134 . - . ID=gene-CCO46_RS24900;Name=CCO46_RS24900;end_range=51134,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24900;partial=true;pseudo=true NZ_NPOH01000005.1 Protein Homology CDS 51054 51134 . - 0 ID=cds-CCO46_RS24900;Parent=gene-CCO46_RS24900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=51134,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313252.1;locus_tag=CCO46_RS24900;partial=true;product=RidA family protein;pseudo=true;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 51133 51177 . + . ID=gene-CCO46_RS25820;Name=CCO46_RS25820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25820 NZ_NPOH01000005.1 Protein Homology CDS 51133 51177 . + 0 ID=cds-WP_419555288.1;Parent=gene-CCO46_RS25820;Dbxref=GenBank:WP_419555288.1;Name=WP_419555288.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019023.6;locus_tag=CCO46_RS25820;product=DUF1493 family protein;protein_id=WP_419555288.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 51551 52009 . - . ID=gene-CCO46_RS07670;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=CCO46_RS07670;old_locus_tag=CCO46_07670 NZ_NPOH01000005.1 Protein Homology CDS 51551 52009 . - 0 ID=cds-WP_000502119.1;Parent=gene-CCO46_RS07670;Dbxref=GenBank:WP_000502119.1;Name=WP_000502119.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=CCO46_RS07670;product=IS200/IS605-like element IS200F family transposase;protein_id=WP_000502119.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 52205 53455 . - . ID=gene-CCO46_RS07680;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CCO46_RS07680;old_locus_tag=CCO46_07680 NZ_NPOH01000005.1 Protein Homology CDS 52205 53455 . - 0 ID=cds-WP_000444508.1;Parent=gene-CCO46_RS07680;Dbxref=GenBank:WP_000444508.1;Name=WP_000444508.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=CCO46_RS07680;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444508.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 53627 54292 . + . ID=gene-CCO46_RS07685;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=CCO46_RS07685;old_locus_tag=CCO46_07685 NZ_NPOH01000005.1 Protein Homology CDS 53627 54292 . + 0 ID=cds-WP_097363290.1;Parent=gene-CCO46_RS07685;Dbxref=GenBank:WP_097363290.1;Name=WP_097363290.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=CCO46_RS07685;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_097363290.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 54289 54618 . + . ID=gene-CCO46_RS07690;Name=CCO46_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07690;old_locus_tag=CCO46_07690 NZ_NPOH01000005.1 Protein Homology CDS 54289 54618 . + 0 ID=cds-WP_000825956.1;Parent=gene-CCO46_RS07690;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=CCO46_RS07690;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 54630 55091 . + . ID=gene-CCO46_RS07695;Name=CCO46_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07695;old_locus_tag=CCO46_07695 NZ_NPOH01000005.1 Protein Homology CDS 54630 55091 . + 0 ID=cds-WP_000476070.1;Parent=gene-CCO46_RS07695;Dbxref=GenBank:WP_000476070.1;Name=WP_000476070.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=CCO46_RS07695;product=NUDIX hydrolase;protein_id=WP_000476070.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 55145 56251 . + . ID=gene-CCO46_RS07700;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=CCO46_RS07700;old_locus_tag=CCO46_07700 NZ_NPOH01000005.1 Protein Homology CDS 55145 56251 . + 0 ID=cds-WP_000004540.1;Parent=gene-CCO46_RS07700;Dbxref=GenBank:WP_000004540.1;Name=WP_000004540.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=CCO46_RS07700;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_000004540.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 56338 56979 . + . ID=gene-CCO46_RS07705;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=CCO46_RS07705;old_locus_tag=CCO46_07705 NZ_NPOH01000005.1 Protein Homology CDS 56338 56979 . + 0 ID=cds-WP_001519653.1;Parent=gene-CCO46_RS07705;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=CCO46_RS07705;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 56983 58353 . + . ID=gene-CCO46_RS07710;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CCO46_RS07710;old_locus_tag=CCO46_07710 NZ_NPOH01000005.1 Protein Homology CDS 56983 58353 . + 0 ID=cds-WP_097363291.1;Parent=gene-CCO46_RS07710;Dbxref=GenBank:WP_097363291.1;Name=WP_097363291.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=CCO46_RS07710;product=adenylosuccinate lyase;protein_id=WP_097363291.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 58480 59151 . + . ID=gene-CCO46_RS07715;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=CCO46_RS07715;old_locus_tag=CCO46_07715 NZ_NPOH01000005.1 Protein Homology CDS 58480 59151 . + 0 ID=cds-WP_001537766.1;Parent=gene-CCO46_RS07715;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=CCO46_RS07715;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 59151 60614 . + . ID=gene-CCO46_RS07720;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=CCO46_RS07720;old_locus_tag=CCO46_07720 NZ_NPOH01000005.1 Protein Homology CDS 59151 60614 . + 0 ID=cds-WP_001031687.1;Parent=gene-CCO46_RS07720;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=CCO46_RS07720;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 60695 61816 . + . ID=gene-CCO46_RS07725;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=CCO46_RS07725;old_locus_tag=CCO46_07725 NZ_NPOH01000005.1 Protein Homology CDS 60695 61816 . + 0 ID=cds-WP_000456514.1;Parent=gene-CCO46_RS07725;Dbxref=GenBank:WP_000456514.1;Name=WP_000456514.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=CCO46_RS07725;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_000456514.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 61856 63190 . - . ID=gene-CCO46_RS07730;Name=CCO46_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07730;old_locus_tag=CCO46_07730 NZ_NPOH01000005.1 Protein Homology CDS 61856 63190 . - 0 ID=cds-WP_097363292.1;Parent=gene-CCO46_RS07730;Dbxref=GenBank:WP_097363292.1;Name=WP_097363292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=CCO46_RS07730;product=hypothetical protein;protein_id=WP_097363292.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 63194 64423 . - . ID=gene-CCO46_RS07735;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CCO46_RS07735;old_locus_tag=CCO46_07735 NZ_NPOH01000005.1 Protein Homology CDS 63194 64423 . - 0 ID=cds-WP_000359410.1;Parent=gene-CCO46_RS07735;Dbxref=GenBank:WP_000359410.1;Name=WP_000359410.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=CCO46_RS07735;product=peptidase T;protein_id=WP_000359410.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 64674 65810 . + . ID=gene-CCO46_RS07745;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=CCO46_RS07745;old_locus_tag=CCO46_07745 NZ_NPOH01000005.1 Protein Homology CDS 64674 65810 . + 0 ID=cds-WP_000531607.1;Parent=gene-CCO46_RS07745;Dbxref=GenBank:WP_000531607.1;Name=WP_000531607.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=CCO46_RS07745;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531607.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 65794 66657 . + . ID=gene-CCO46_RS07750;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=CCO46_RS07750;old_locus_tag=CCO46_07750 NZ_NPOH01000005.1 Protein Homology CDS 65794 66657 . + 0 ID=cds-WP_058331237.1;Parent=gene-CCO46_RS07750;Dbxref=GenBank:WP_058331237.1;Name=WP_058331237.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=CCO46_RS07750;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_058331237.1;transl_table=11 NZ_NPOH01000005.1 RefSeq pseudogene 66985 67994 . + . ID=gene-CCO46_RS07760;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=pseudogene;locus_tag=CCO46_RS07760;old_locus_tag=CCO46_07760;pseudo=true NZ_NPOH01000005.1 Protein Homology CDS 66985 67994 . + 0 ID=cds-CCO46_RS07760;Parent=gene-CCO46_RS07760;Note=frameshifted;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=CCO46_RS07760;product=SPI-2 type III secretion system effector SifA;pseudo=true;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 68310 69089 . + . ID=gene-CCO46_RS07765;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=CCO46_RS07765;old_locus_tag=CCO46_07765 NZ_NPOH01000005.1 Protein Homology CDS 68310 69089 . + 0 ID=cds-WP_000580299.1;Parent=gene-CCO46_RS07765;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=CCO46_RS07765;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 69114 70160 . + . ID=gene-CCO46_RS07770;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=CCO46_RS07770;old_locus_tag=CCO46_07770 NZ_NPOH01000005.1 Protein Homology CDS 69114 70160 . + 0 ID=cds-WP_000759329.1;Parent=gene-CCO46_RS07770;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=CCO46_RS07770;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 70242 71063 . - . ID=gene-CCO46_RS07775;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=CCO46_RS07775;old_locus_tag=CCO46_07775 NZ_NPOH01000005.1 Protein Homology CDS 70242 71063 . - 0 ID=cds-WP_001191856.1;Parent=gene-CCO46_RS07775;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=CCO46_RS07775;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 71082 71993 . - . ID=gene-CCO46_RS07780;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=CCO46_RS07780;old_locus_tag=CCO46_07780 NZ_NPOH01000005.1 Protein Homology CDS 71082 71993 . - 0 ID=cds-WP_000291331.1;Parent=gene-CCO46_RS07780;Dbxref=GenBank:WP_000291331.1;Name=WP_000291331.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=CCO46_RS07780;product=N-acetylglucosamine kinase;protein_id=WP_000291331.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 72022 73266 . - . ID=gene-CCO46_RS07785;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=CCO46_RS07785;old_locus_tag=CCO46_07785 NZ_NPOH01000005.1 Protein Homology CDS 72022 73266 . - 0 ID=cds-WP_023201642.1;Parent=gene-CCO46_RS07785;Dbxref=GenBank:WP_023201642.1;Name=WP_023201642.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=CCO46_RS07785;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_023201642.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 73266 73967 . - . ID=gene-CCO46_RS07790;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=CCO46_RS07790;old_locus_tag=CCO46_07790 NZ_NPOH01000005.1 Protein Homology CDS 73266 73967 . - 0 ID=cds-WP_023201641.1;Parent=gene-CCO46_RS07790;Dbxref=GenBank:WP_023201641.1;Name=WP_023201641.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=CCO46_RS07790;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_023201641.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 73960 75159 . - . ID=gene-CCO46_RS07795;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=CCO46_RS07795;old_locus_tag=CCO46_07795 NZ_NPOH01000005.1 Protein Homology CDS 73960 75159 . - 0 ID=cds-WP_001534775.1;Parent=gene-CCO46_RS07795;Dbxref=GenBank:WP_001534775.1;Name=WP_001534775.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=CCO46_RS07795;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001534775.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 75497 78943 . + . ID=gene-CCO46_RS07800;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CCO46_RS07800;old_locus_tag=CCO46_07800 NZ_NPOH01000005.1 Protein Homology CDS 75497 78943 . + 0 ID=cds-WP_097363293.1;Parent=gene-CCO46_RS07800;Dbxref=GenBank:WP_097363293.1;Name=WP_097363293.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=CCO46_RS07800;product=transcription-repair coupling factor;protein_id=WP_097363293.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 79091 80056 . + . ID=gene-CCO46_RS07805;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=CCO46_RS07805;old_locus_tag=CCO46_07805 NZ_NPOH01000005.1 Protein Homology CDS 79091 80056 . + 0 ID=cds-WP_097363294.1;Parent=gene-CCO46_RS07805;Dbxref=GenBank:WP_097363294.1;Name=WP_097363294.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=CCO46_RS07805;product=L%2CD-transpeptidase LdtC;protein_id=WP_097363294.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 80153 80410 . - . ID=gene-CCO46_RS07810;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=CCO46_RS07810;old_locus_tag=CCO46_07810 NZ_NPOH01000005.1 Protein Homology CDS 80153 80410 . - 0 ID=cds-WP_000800159.1;Parent=gene-CCO46_RS07810;Dbxref=GenBank:WP_000800159.1;Name=WP_000800159.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=CCO46_RS07810;product=multiple stress resistance protein BhsA;protein_id=WP_000800159.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 80652 81287 . + . ID=gene-CCO46_RS07815;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=CCO46_RS07815;old_locus_tag=CCO46_07815 NZ_NPOH01000005.1 Protein Homology CDS 80652 81287 . + 0 ID=cds-WP_000205985.1;Parent=gene-CCO46_RS07815;Dbxref=GenBank:WP_000205985.1;Name=WP_000205985.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835112.1;locus_tag=CCO46_RS07815;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205985.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 81362 81901 . - . ID=gene-CCO46_RS07820;Name=CCO46_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07820;old_locus_tag=CCO46_07820 NZ_NPOH01000005.1 Protein Homology CDS 81362 81901 . - 0 ID=cds-WP_001043449.1;Parent=gene-CCO46_RS07820;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=CCO46_RS07820;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 82080 83384 . - . ID=gene-CCO46_RS07825;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=CCO46_RS07825;old_locus_tag=CCO46_07825 NZ_NPOH01000005.1 Protein Homology CDS 82080 83384 . - 0 ID=cds-WP_000211053.1;Parent=gene-CCO46_RS07825;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=CCO46_RS07825;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 83639 84181 . - . ID=gene-CCO46_RS07830;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=CCO46_RS07830;old_locus_tag=CCO46_07830 NZ_NPOH01000005.1 Protein Homology CDS 83639 84181 . - 0 ID=cds-WP_094887588.1;Parent=gene-CCO46_RS07830;Dbxref=GenBank:WP_094887588.1;Name=WP_094887588.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=CCO46_RS07830;product=alpha/beta hydrolase YcfP;protein_id=WP_094887588.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 84206 85231 . - . ID=gene-CCO46_RS07835;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=CCO46_RS07835;old_locus_tag=CCO46_07835 NZ_NPOH01000005.1 Protein Homology CDS 84206 85231 . - 0 ID=cds-WP_080210277.1;Parent=gene-CCO46_RS07835;Dbxref=GenBank:WP_080210277.1;Name=WP_080210277.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=CCO46_RS07835;product=beta-N-acetylhexosaminidase;protein_id=WP_080210277.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 85242 86066 . - . ID=gene-CCO46_RS07840;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=CCO46_RS07840;old_locus_tag=CCO46_07840 NZ_NPOH01000005.1 Protein Homology CDS 85242 86066 . - 0 ID=cds-WP_001257320.1;Parent=gene-CCO46_RS07840;Dbxref=GenBank:WP_001257320.1;Name=WP_001257320.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=CCO46_RS07840;product=thiamine kinase;protein_id=WP_001257320.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 86047 86685 . - . ID=gene-CCO46_RS07845;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=CCO46_RS07845;old_locus_tag=CCO46_07845 NZ_NPOH01000005.1 Protein Homology CDS 86047 86685 . - 0 ID=cds-WP_000164355.1;Parent=gene-CCO46_RS07845;Dbxref=GenBank:WP_000164355.1;Name=WP_000164355.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=CCO46_RS07845;product=penicillin-binding protein activator LpoB;protein_id=WP_000164355.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 86699 87073 . - . ID=gene-CCO46_RS07850;Name=CCO46_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07850;old_locus_tag=CCO46_07850 NZ_NPOH01000005.1 Protein Homology CDS 86699 87073 . - 0 ID=cds-WP_000589563.1;Parent=gene-CCO46_RS07850;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=CCO46_RS07850;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 87076 87435 . - . ID=gene-CCO46_RS07855;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=CCO46_RS07855;old_locus_tag=CCO46_07855 NZ_NPOH01000005.1 Protein Homology CDS 87076 87435 . - 0 ID=cds-WP_001532068.1;Parent=gene-CCO46_RS07855;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=CCO46_RS07855;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 87777 89951 . + . ID=gene-CCO46_RS07860;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=CCO46_RS07860;old_locus_tag=CCO46_07860 NZ_NPOH01000005.1 Protein Homology CDS 87777 89951 . + 0 ID=cds-WP_017466045.1;Parent=gene-CCO46_RS07860;Dbxref=GenBank:WP_017466045.1;Name=WP_017466045.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=CCO46_RS07860;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_017466045.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 90036 91469 . - . ID=gene-CCO46_RS07865;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CCO46_RS07865;old_locus_tag=CCO46_07865 NZ_NPOH01000005.1 Protein Homology CDS 90036 91469 . - 0 ID=cds-WP_000475705.1;Parent=gene-CCO46_RS07865;Dbxref=GenBank:WP_000475705.1;Name=WP_000475705.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=CCO46_RS07865;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475705.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 91764 92561 . - . ID=gene-CCO46_RS07870;Name=CCO46_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07870;old_locus_tag=CCO46_07870 NZ_NPOH01000005.1 Protein Homology CDS 91764 92561 . - 0 ID=cds-WP_000480274.1;Parent=gene-CCO46_RS07870;Dbxref=GenBank:WP_000480274.1;Name=WP_000480274.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=CCO46_RS07870;product=metal-dependent hydrolase;protein_id=WP_000480274.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 92572 93576 . - . ID=gene-CCO46_RS07875;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=CCO46_RS07875;old_locus_tag=CCO46_07875 NZ_NPOH01000005.1 Protein Homology CDS 92572 93576 . - 0 ID=cds-WP_000872450.1;Parent=gene-CCO46_RS07875;Dbxref=GenBank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=CCO46_RS07875;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 93573 94214 . - . ID=gene-CCO46_RS07880;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CCO46_RS07880;old_locus_tag=CCO46_07880 NZ_NPOH01000005.1 Protein Homology CDS 93573 94214 . - 0 ID=cds-WP_000535396.1;Parent=gene-CCO46_RS07880;Dbxref=GenBank:WP_000535396.1;Name=WP_000535396.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=CCO46_RS07880;product=dTMP kinase;protein_id=WP_000535396.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 94204 95226 . - . ID=gene-CCO46_RS07885;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=CCO46_RS07885;old_locus_tag=CCO46_07885 NZ_NPOH01000005.1 Protein Homology CDS 94204 95226 . - 0 ID=cds-WP_000736459.1;Parent=gene-CCO46_RS07885;Dbxref=GenBank:WP_000736459.1;Name=WP_000736459.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=CCO46_RS07885;product=cell division protein YceG;protein_id=WP_000736459.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 95229 96038 . - . ID=gene-CCO46_RS07890;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=CCO46_RS07890;old_locus_tag=CCO46_07890 NZ_NPOH01000005.1 Protein Homology CDS 95229 96038 . - 0 ID=cds-WP_058331239.1;Parent=gene-CCO46_RS07890;Dbxref=GenBank:WP_058331239.1;Name=WP_058331239.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=CCO46_RS07890;product=aminodeoxychorismate lyase;protein_id=WP_058331239.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 96162 97403 . - . ID=gene-CCO46_RS07895;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CCO46_RS07895;old_locus_tag=CCO46_07895 NZ_NPOH01000005.1 Protein Homology CDS 96162 97403 . - 0 ID=cds-WP_000044664.1;Parent=gene-CCO46_RS07895;Dbxref=GenBank:WP_000044664.1;Name=WP_000044664.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=CCO46_RS07895;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044664.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 97489 97725 . - . ID=gene-CCO46_RS07900;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=CCO46_RS07900;old_locus_tag=CCO46_07900 NZ_NPOH01000005.1 Protein Homology CDS 97489 97725 . - 0 ID=cds-WP_000103754.1;Parent=gene-CCO46_RS07900;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=CCO46_RS07900;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 97881 98615 . - . ID=gene-CCO46_RS07905;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CCO46_RS07905;old_locus_tag=CCO46_07905 NZ_NPOH01000005.1 Protein Homology CDS 97881 98615 . - 0 ID=cds-WP_000007236.1;Parent=gene-CCO46_RS07905;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=CCO46_RS07905;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 98628 99557 . - . ID=gene-CCO46_RS07910;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CCO46_RS07910;old_locus_tag=CCO46_07910 NZ_NPOH01000005.1 Protein Homology CDS 98628 99557 . - 0 ID=cds-WP_080160468.1;Parent=gene-CCO46_RS07910;Dbxref=GenBank:WP_080160468.1;Name=WP_080160468.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=CCO46_RS07910;product=ACP S-malonyltransferase;protein_id=WP_080160468.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 99573 100526 . - . ID=gene-CCO46_RS07915;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=CCO46_RS07915;old_locus_tag=CCO46_07915 NZ_NPOH01000005.1 Protein Homology CDS 99573 100526 . - 0 ID=cds-WP_000288148.1;Parent=gene-CCO46_RS07915;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=CCO46_RS07915;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 100606 101685 . - . ID=gene-CCO46_RS07920;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CCO46_RS07920;old_locus_tag=CCO46_07920 NZ_NPOH01000005.1 Protein Homology CDS 100606 101685 . - 0 ID=cds-WP_001518286.1;Parent=gene-CCO46_RS07920;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=CCO46_RS07920;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 101819 101992 . - . ID=gene-CCO46_RS07925;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CCO46_RS07925;old_locus_tag=CCO46_07925 NZ_NPOH01000005.1 Protein Homology CDS 101819 101992 . - 0 ID=cds-WP_000290727.1;Parent=gene-CCO46_RS07925;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=CCO46_RS07925;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 102044 102565 . - . ID=gene-CCO46_RS07930;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=CCO46_RS07930;old_locus_tag=CCO46_07930 NZ_NPOH01000005.1 Protein Homology CDS 102044 102565 . - 0 ID=cds-WP_001174492.1;Parent=gene-CCO46_RS07930;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=CCO46_RS07930;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 102763 103347 . + . ID=gene-CCO46_RS07935;Name=CCO46_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07935;old_locus_tag=CCO46_07935 NZ_NPOH01000005.1 Protein Homology CDS 102763 103347 . + 0 ID=cds-WP_001137603.1;Parent=gene-CCO46_RS07935;Dbxref=GenBank:WP_001137603.1;Name=WP_001137603.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003836743.1;locus_tag=CCO46_RS07935;product=Maf family protein;protein_id=WP_001137603.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 103430 104389 . - . ID=gene-CCO46_RS07940;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=CCO46_RS07940;old_locus_tag=CCO46_07940 NZ_NPOH01000005.1 Protein Homology CDS 103430 104389 . - 0 ID=cds-WP_023213203.1;Parent=gene-CCO46_RS07940;Dbxref=GenBank:WP_023213203.1;Name=WP_023213203.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846318.1;locus_tag=CCO46_RS07940;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_023213203.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 104963 108166 . + . ID=gene-CCO46_RS07950;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=CCO46_RS07950;old_locus_tag=CCO46_07950 NZ_NPOH01000005.1 Protein Homology CDS 104963 108166 . + 0 ID=cds-WP_097363295.1;Parent=gene-CCO46_RS07950;Dbxref=GenBank:WP_097363295.1;Name=WP_097363295.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=CCO46_RS07950;product=ribonuclease E;protein_id=WP_097363295.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 108419 109372 . - . ID=gene-CCO46_RS07960;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=CCO46_RS07960;old_locus_tag=CCO46_07960 NZ_NPOH01000005.1 Protein Homology CDS 108419 109372 . - 0 ID=cds-WP_058331241.1;Parent=gene-CCO46_RS07960;Dbxref=GenBank:WP_058331241.1;Name=WP_058331241.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=CCO46_RS07960;product=flagellar hook-associated protein FlgL;protein_id=WP_058331241.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 109387 111048 . - . ID=gene-CCO46_RS07965;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=CCO46_RS07965;old_locus_tag=CCO46_07965 NZ_NPOH01000005.1 Protein Homology CDS 109387 111048 . - 0 ID=cds-WP_000096425.1;Parent=gene-CCO46_RS07965;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=CCO46_RS07965;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 111113 112063 . - . ID=gene-CCO46_RS07970;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=CCO46_RS07970;old_locus_tag=CCO46_07970 NZ_NPOH01000005.1 Protein Homology CDS 111113 112063 . - 0 ID=cds-WP_000578692.1;Parent=gene-CCO46_RS07970;Dbxref=GenBank:WP_000578692.1;Name=WP_000578692.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=CCO46_RS07970;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578692.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 112063 113160 . - . ID=gene-CCO46_RS07975;Name=CCO46_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07975;old_locus_tag=CCO46_07975 NZ_NPOH01000005.1 Protein Homology CDS 112063 113160 . - 0 ID=cds-WP_001518955.1;Parent=gene-CCO46_RS07975;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=CCO46_RS07975;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 113172 113870 . - . ID=gene-CCO46_RS07980;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=CCO46_RS07980;old_locus_tag=CCO46_07980 NZ_NPOH01000005.1 Protein Homology CDS 113172 113870 . - 0 ID=cds-WP_001174897.1;Parent=gene-CCO46_RS07980;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=CCO46_RS07980;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 113924 114706 . - . ID=gene-CCO46_RS07985;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=CCO46_RS07985;old_locus_tag=CCO46_07985 NZ_NPOH01000005.1 Protein Homology CDS 113924 114706 . - 0 ID=cds-WP_000625851.1;Parent=gene-CCO46_RS07985;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=CCO46_RS07985;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 114720 115475 . - . ID=gene-CCO46_RS07990;Name=CCO46_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS07990;old_locus_tag=CCO46_07990 NZ_NPOH01000005.1 Protein Homology CDS 114720 115475 . - 0 ID=cds-WP_000349278.1;Parent=gene-CCO46_RS07990;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=CCO46_RS07990;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 115496 116707 . - . ID=gene-CCO46_RS07995;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=CCO46_RS07995;old_locus_tag=CCO46_07995 NZ_NPOH01000005.1 Protein Homology CDS 115496 116707 . - 0 ID=cds-WP_000010567.1;Parent=gene-CCO46_RS07995;Dbxref=GenBank:WP_000010567.1;Name=WP_000010567.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=CCO46_RS07995;product=flagellar hook protein FlgE;protein_id=WP_000010567.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 116734 117432 . - . ID=gene-CCO46_RS08000;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=CCO46_RS08000;old_locus_tag=CCO46_08000 NZ_NPOH01000005.1 Protein Homology CDS 116734 117432 . - 0 ID=cds-WP_000020450.1;Parent=gene-CCO46_RS08000;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=CCO46_RS08000;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 117444 117848 . - . ID=gene-CCO46_RS08005;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=CCO46_RS08005;old_locus_tag=CCO46_08005 NZ_NPOH01000005.1 Protein Homology CDS 117444 117848 . - 0 ID=cds-WP_001196448.1;Parent=gene-CCO46_RS08005;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=CCO46_RS08005;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 117852 118268 . - . ID=gene-CCO46_RS08010;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=CCO46_RS08010;old_locus_tag=CCO46_08010 NZ_NPOH01000005.1 Protein Homology CDS 117852 118268 . - 0 ID=cds-WP_000887043.1;Parent=gene-CCO46_RS08010;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=CCO46_RS08010;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 118425 119084 . + . ID=gene-CCO46_RS08020;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=CCO46_RS08020;old_locus_tag=CCO46_08020 NZ_NPOH01000005.1 Protein Homology CDS 118425 119084 . + 0 ID=cds-WP_058331243.1;Parent=gene-CCO46_RS08020;Dbxref=GenBank:WP_058331243.1;Name=WP_058331243.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=CCO46_RS08020;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_058331243.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 119176 119469 . + . ID=gene-CCO46_RS08025;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=CCO46_RS08025;old_locus_tag=CCO46_08025 NZ_NPOH01000005.1 Protein Homology CDS 119176 119469 . + 0 ID=cds-WP_000020893.1;Parent=gene-CCO46_RS08025;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=CCO46_RS08025;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 119474 119896 . + . ID=gene-CCO46_RS08030;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=CCO46_RS08030;old_locus_tag=CCO46_08030 NZ_NPOH01000005.1 Protein Homology CDS 119474 119896 . + 0 ID=cds-WP_000197547.1;Parent=gene-CCO46_RS08030;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=CCO46_RS08030;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 119978 121513 . - . ID=gene-CCO46_RS08035;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=CCO46_RS08035;old_locus_tag=CCO46_08035 NZ_NPOH01000005.1 Protein Homology CDS 119978 121513 . - 0 ID=cds-WP_097363296.1;Parent=gene-CCO46_RS08035;Dbxref=GenBank:WP_097363296.1;Name=WP_097363296.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=CCO46_RS08035;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_097363296.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 121817 122740 . - . ID=gene-CCO46_RS08040;Name=CCO46_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08040;old_locus_tag=CCO46_08040 NZ_NPOH01000005.1 Protein Homology CDS 121817 122740 . - 0 ID=cds-WP_094887591.1;Parent=gene-CCO46_RS08040;Dbxref=GenBank:WP_094887591.1;Name=WP_094887591.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=CCO46_RS08040;product=Gfo/Idh/MocA family protein;protein_id=WP_094887591.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 122742 123389 . - . ID=gene-CCO46_RS08045;Name=CCO46_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08045;old_locus_tag=CCO46_08045 NZ_NPOH01000005.1 Protein Homology CDS 122742 123389 . - 0 ID=cds-WP_058331244.1;Parent=gene-CCO46_RS08045;Dbxref=GenBank:WP_058331244.1;Name=WP_058331244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=CCO46_RS08045;product=YceH family protein;protein_id=WP_058331244.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 123425 124009 . - . ID=gene-CCO46_RS08050;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=CCO46_RS08050;old_locus_tag=CCO46_08050 NZ_NPOH01000005.1 Protein Homology CDS 123425 124009 . - 0 ID=cds-WP_000468204.1;Parent=gene-CCO46_RS08050;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=CCO46_RS08050;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 124246 125454 . + . ID=gene-CCO46_RS08055;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=CCO46_RS08055;old_locus_tag=CCO46_08055 NZ_NPOH01000005.1 Protein Homology CDS 124246 125454 . + 0 ID=cds-WP_000092174.1;Parent=gene-CCO46_RS08055;Dbxref=GenBank:WP_000092174.1;Name=WP_000092174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=CCO46_RS08055;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092174.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 125518 126165 . + . ID=gene-CCO46_RS08060;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=CCO46_RS08060;old_locus_tag=CCO46_08060 NZ_NPOH01000005.1 Protein Homology CDS 125518 126165 . + 0 ID=cds-WP_000780893.1;Parent=gene-CCO46_RS08060;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=CCO46_RS08060;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 126290 126850 . + . ID=gene-CCO46_RS08065;Name=CCO46_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08065;old_locus_tag=CCO46_08065 NZ_NPOH01000005.1 Protein Homology CDS 126290 126850 . + 0 ID=cds-WP_000713057.1;Parent=gene-CCO46_RS08065;Dbxref=GenBank:WP_000713057.1;Name=WP_000713057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=CCO46_RS08065;product=lipoprotein;protein_id=WP_000713057.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 126954 128000 . + . ID=gene-CCO46_RS08070;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=CCO46_RS08070;old_locus_tag=CCO46_08070 NZ_NPOH01000005.1 Protein Homology CDS 126954 128000 . + 0 ID=cds-WP_031605446.1;Parent=gene-CCO46_RS08070;Dbxref=GenBank:WP_031605446.1;Name=WP_031605446.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=CCO46_RS08070;product=dihydroorotase;protein_id=WP_031605446.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 128073 128318 . + . ID=gene-CCO46_RS08075;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=CCO46_RS08075;old_locus_tag=CCO46_08075 NZ_NPOH01000005.1 Protein Homology CDS 128073 128318 . + 0 ID=cds-WP_001217763.1;Parent=gene-CCO46_RS08075;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=CCO46_RS08075;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 128608 128862 . + . ID=gene-CCO46_RS08080;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=CCO46_RS08080;old_locus_tag=CCO46_08080 NZ_NPOH01000005.1 Protein Homology CDS 128608 128862 . + 0 ID=cds-WP_000414441.1;Parent=gene-CCO46_RS08080;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=CCO46_RS08080;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 128975 130093 . + . ID=gene-CCO46_RS08085;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=CCO46_RS08085;old_locus_tag=CCO46_08085 NZ_NPOH01000005.1 Protein Homology CDS 128975 130093 . + 0 ID=cds-WP_080160466.1;Parent=gene-CCO46_RS08085;Dbxref=GenBank:WP_080160466.1;Name=WP_080160466.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=CCO46_RS08085;product=N-methyl-L-tryptophan oxidase;protein_id=WP_080160466.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 130134 130247 . + . ID=gene-CCO46_RS08090;Name=CCO46_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08090;old_locus_tag=CCO46_08090 NZ_NPOH01000005.1 Protein Homology CDS 130134 130247 . + 0 ID=cds-WP_001253282.1;Parent=gene-CCO46_RS08090;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=CCO46_RS08090;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 130510 131082 . + . ID=gene-CCO46_RS08100;Name=CCO46_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08100;old_locus_tag=CCO46_08100 NZ_NPOH01000005.1 Protein Homology CDS 130510 131082 . + 0 ID=cds-WP_001159791.1;Parent=gene-CCO46_RS08100;Dbxref=GenBank:WP_001159791.1;Name=WP_001159791.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=CCO46_RS08100;product=cytochrome b;protein_id=WP_001159791.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 131079 131654 . + . ID=gene-CCO46_RS08105;Name=CCO46_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08105;old_locus_tag=CCO46_08105 NZ_NPOH01000005.1 Protein Homology CDS 131079 131654 . + 0 ID=cds-WP_000739886.1;Parent=gene-CCO46_RS08105;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=CCO46_RS08105;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 131706 132758 . - . ID=gene-CCO46_RS08110;Name=CCO46_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08110;old_locus_tag=CCO46_08110 NZ_NPOH01000005.1 Protein Homology CDS 131706 132758 . - 0 ID=cds-WP_001144623.1;Parent=gene-CCO46_RS08110;Dbxref=GenBank:WP_001144623.1;Name=WP_001144623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=CCO46_RS08110;product=rhodanese-related sulfurtransferase;protein_id=WP_001144623.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 132978 133898 . + . ID=gene-CCO46_RS08115;Name=CCO46_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08115;old_locus_tag=CCO46_08115 NZ_NPOH01000005.1 Protein Homology CDS 132978 133898 . + 0 ID=cds-WP_000163972.1;Parent=gene-CCO46_RS08115;Dbxref=GenBank:WP_000163972.1;Name=WP_000163972.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=CCO46_RS08115;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163972.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 134053 135267 . + . ID=gene-CCO46_RS08125;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=CCO46_RS08125;old_locus_tag=CCO46_08125 NZ_NPOH01000005.1 Protein Homology CDS 134053 135267 . + 0 ID=cds-WP_023219175.1;Parent=gene-CCO46_RS08125;Dbxref=GenBank:WP_023219175.1;Name=WP_023219175.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=CCO46_RS08125;product=multidrug efflux MFS transporter MdtG;protein_id=WP_023219175.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 135349 135723 . + . ID=gene-CCO46_RS08130;Name=CCO46_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08130;old_locus_tag=CCO46_08130 NZ_NPOH01000005.1 Protein Homology CDS 135349 135723 . + 0 ID=cds-WP_001534912.1;Parent=gene-CCO46_RS08130;Dbxref=GenBank:WP_001534912.1;Name=WP_001534912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=CCO46_RS08130;product=MysB family protein;protein_id=WP_001534912.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 135724 135951 . - . ID=gene-CCO46_RS08135;Name=CCO46_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08135;old_locus_tag=CCO46_08135 NZ_NPOH01000005.1 Protein Homology CDS 135724 135951 . - 0 ID=cds-WP_001217832.1;Parent=gene-CCO46_RS08135;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=CCO46_RS08135;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 136017 138560 . - . ID=gene-CCO46_RS08140;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=CCO46_RS08140;old_locus_tag=CCO46_08140 NZ_NPOH01000005.1 Protein Homology CDS 136017 138560 . - 0 ID=cds-WP_001044609.1;Parent=gene-CCO46_RS08140;Dbxref=GenBank:WP_001044609.1;Name=WP_001044609.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=CCO46_RS08140;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001044609.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 138553 140088 . - . ID=gene-CCO46_RS08145;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=CCO46_RS08145;old_locus_tag=CCO46_08145 NZ_NPOH01000005.1 Protein Homology CDS 138553 140088 . - 0 ID=cds-WP_001562609.1;Parent=gene-CCO46_RS08145;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=CCO46_RS08145;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 140360 141514 . + . ID=gene-CCO46_RS08150;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=CCO46_RS08150;old_locus_tag=CCO46_08150 NZ_NPOH01000005.1 Protein Homology CDS 140360 141514 . + 0 ID=cds-WP_020898666.1;Parent=gene-CCO46_RS08150;Dbxref=GenBank:WP_020898666.1;Name=WP_020898666.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=CCO46_RS08150;product=glucans biosynthesis protein MdoC;protein_id=WP_020898666.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 141531 143018 . - . ID=gene-CCO46_RS08155;Name=CCO46_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08155;old_locus_tag=CCO46_08155 NZ_NPOH01000005.1 Protein Homology CDS 141531 143018 . - 0 ID=cds-WP_000976323.1;Parent=gene-CCO46_RS08155;Dbxref=GenBank:WP_000976323.1;Name=WP_000976323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=CCO46_RS08155;product=phospholipase D family protein;protein_id=WP_000976323.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 142954 143493 . - . ID=gene-CCO46_RS08160;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=CCO46_RS08160;old_locus_tag=CCO46_08160 NZ_NPOH01000005.1 Protein Homology CDS 142954 143493 . - 0 ID=cds-WP_000203944.1;Parent=gene-CCO46_RS08160;Dbxref=GenBank:WP_000203944.1;Name=WP_000203944.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=CCO46_RS08160;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203944.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 143582 143902 . - . ID=gene-CCO46_RS08165;Name=CCO46_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08165;old_locus_tag=CCO46_08165 NZ_NPOH01000005.1 Protein Homology CDS 143582 143902 . - 0 ID=cds-WP_000111257.1;Parent=gene-CCO46_RS08165;Dbxref=GenBank:WP_000111257.1;Name=WP_000111257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=CCO46_RS08165;product=type 1 fimbrial protein;protein_id=WP_000111257.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 144033 144359 . - . ID=gene-CCO46_RS08170;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=CCO46_RS08170;old_locus_tag=CCO46_08170 NZ_NPOH01000005.1 Protein Homology CDS 144033 144359 . - 0 ID=cds-WP_000557256.1;Parent=gene-CCO46_RS08170;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=CCO46_RS08170;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 144421 144876 . - . ID=gene-CCO46_RS08175;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=CCO46_RS08175;old_locus_tag=CCO46_08175 NZ_NPOH01000005.1 Protein Homology CDS 144421 144876 . - 0 ID=cds-WP_000771416.1;Parent=gene-CCO46_RS08175;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=CCO46_RS08175;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 144918 145373 . - . ID=gene-CCO46_RS08180;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=CCO46_RS08180;old_locus_tag=CCO46_08180 NZ_NPOH01000005.1 Protein Homology CDS 144918 145373 . - 0 ID=cds-WP_000791655.1;Parent=gene-CCO46_RS08180;Dbxref=GenBank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=CCO46_RS08180;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 146128 146778 . + . ID=gene-CCO46_RS08190;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=CCO46_RS08190;old_locus_tag=CCO46_08190 NZ_NPOH01000005.1 Protein Homology CDS 146128 146778 . + 0 ID=cds-WP_000481517.1;Parent=gene-CCO46_RS08190;Dbxref=GenBank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=CCO46_RS08190;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 146783 147178 . + . ID=gene-CCO46_RS08195;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=CCO46_RS08195;old_locus_tag=CCO46_08195 NZ_NPOH01000005.1 Protein Homology CDS 146783 147178 . + 0 ID=cds-WP_000833307.1;Parent=gene-CCO46_RS08195;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=CCO46_RS08195;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 147205 147621 . + . ID=gene-CCO46_RS08200;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=CCO46_RS08200;old_locus_tag=CCO46_08200 NZ_NPOH01000005.1 Protein Homology CDS 147205 147621 . + 0 ID=cds-WP_001264073.1;Parent=gene-CCO46_RS08200;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=CCO46_RS08200;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 147648 148481 . + . ID=gene-CCO46_RS08205;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=CCO46_RS08205;old_locus_tag=CCO46_08205 NZ_NPOH01000005.1 Protein Homology CDS 147648 148481 . + 0 ID=cds-WP_001137620.1;Parent=gene-CCO46_RS08205;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=CCO46_RS08205;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 148520 149002 . - . ID=gene-CCO46_RS08210;Name=CCO46_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08210;old_locus_tag=CCO46_08210 NZ_NPOH01000005.1 Protein Homology CDS 148520 149002 . - 0 ID=cds-WP_001546652.1;Parent=gene-CCO46_RS08210;Dbxref=GenBank:WP_001546652.1;Name=WP_001546652.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=CCO46_RS08210;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 149103 149657 . - . ID=gene-CCO46_RS08215;Name=CCO46_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08215;old_locus_tag=CCO46_08215 NZ_NPOH01000005.1 Protein Homology CDS 149103 149657 . - 0 ID=cds-WP_097363297.1;Parent=gene-CCO46_RS08215;Dbxref=GenBank:WP_097363297.1;Name=WP_097363297.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=CCO46_RS08215;product=TorD/DmsD family molecular chaperone;protein_id=WP_097363297.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 149681 150418 . - . ID=gene-CCO46_RS08220;Name=CCO46_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08220;old_locus_tag=CCO46_08220 NZ_NPOH01000005.1 Protein Homology CDS 149681 150418 . - 0 ID=cds-WP_000283643.1;Parent=gene-CCO46_RS08220;Dbxref=GenBank:WP_000283643.1;Name=WP_000283643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=CCO46_RS08220;product=phosphatase;protein_id=WP_000283643.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 150503 151441 . - . ID=gene-CCO46_RS08225;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=CCO46_RS08225;old_locus_tag=CCO46_08225 NZ_NPOH01000005.1 Protein Homology CDS 150503 151441 . - 0 ID=cds-WP_080160465.1;Parent=gene-CCO46_RS08225;Dbxref=GenBank:WP_080160465.1;Name=WP_080160465.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=CCO46_RS08225;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_080160465.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 151677 151764 . + . ID=gene-CCO46_RS08235;Name=CCO46_RS08235;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS08235;old_locus_tag=CCO46_08235 NZ_NPOH01000005.1 tRNAscan-SE tRNA 151677 151764 . + . ID=rna-CCO46_RS08235;Parent=gene-CCO46_RS08235;anticodon=(pos:151711..151713);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS08235;product=tRNA-Ser NZ_NPOH01000005.1 tRNAscan-SE exon 151677 151764 . + . ID=exon-CCO46_RS08235-1;Parent=rna-CCO46_RS08235;anticodon=(pos:151711..151713);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS08235;product=tRNA-Ser NZ_NPOH01000005.1 RefSeq gene 151813 151948 . + . ID=gene-CCO46_RS08240;Name=CCO46_RS08240;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO46_RS08240;old_locus_tag=CCO46_08240 NZ_NPOH01000005.1 cmsearch ncRNA 151813 151948 . + . ID=rna-CCO46_RS08240;Parent=gene-CCO46_RS08240;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS08240;product=RtT sRNA NZ_NPOH01000005.1 cmsearch exon 151813 151948 . + . ID=exon-CCO46_RS08240-1;Parent=rna-CCO46_RS08240;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS08240;product=RtT sRNA NZ_NPOH01000005.1 RefSeq gene 152100 153206 . - . ID=gene-CCO46_RS08245;Name=CCO46_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08245;old_locus_tag=CCO46_08245 NZ_NPOH01000005.1 Protein Homology CDS 152100 153206 . - 0 ID=cds-WP_000988589.1;Parent=gene-CCO46_RS08245;Dbxref=GenBank:WP_000988589.1;Name=WP_000988589.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=CCO46_RS08245;product=Gfo/Idh/MocA family protein;protein_id=WP_000988589.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 153217 154497 . - . ID=gene-CCO46_RS08250;Name=CCO46_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08250;old_locus_tag=CCO46_08250 NZ_NPOH01000005.1 Protein Homology CDS 153217 154497 . - 0 ID=cds-WP_000560758.1;Parent=gene-CCO46_RS08250;Dbxref=GenBank:WP_000560758.1;Name=WP_000560758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=CCO46_RS08250;product=MFS transporter;protein_id=WP_000560758.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 154780 155472 . - . ID=gene-CCO46_RS08255;Name=CCO46_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08255;old_locus_tag=CCO46_08255 NZ_NPOH01000005.1 Protein Homology CDS 154780 155472 . - 0 ID=cds-WP_097363298.1;Parent=gene-CCO46_RS08255;Dbxref=GenBank:WP_097363298.1;Name=WP_097363298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=CCO46_RS08255;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_097363298.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 155518 156678 . - . ID=gene-CCO46_RS08260;Name=CCO46_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08260;old_locus_tag=CCO46_08260 NZ_NPOH01000005.1 Protein Homology CDS 155518 156678 . - 0 ID=cds-WP_000525756.1;Parent=gene-CCO46_RS08260;Dbxref=GenBank:WP_000525756.1;Name=WP_000525756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=CCO46_RS08260;product=N-acetylneuraminate epimerase;protein_id=WP_000525756.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 157184 157864 . + . ID=gene-CCO46_RS08265;Name=CCO46_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08265;old_locus_tag=CCO46_08265 NZ_NPOH01000005.1 Protein Homology CDS 157184 157864 . + 0 ID=cds-WP_000054243.1;Parent=gene-CCO46_RS08265;Dbxref=GenBank:WP_000054243.1;Name=WP_000054243.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=CCO46_RS08265;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054243.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 158192 159688 . + . ID=gene-CCO46_RS08275;Name=CCO46_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08275;old_locus_tag=CCO46_08275 NZ_NPOH01000005.1 Protein Homology CDS 158192 159688 . + 0 ID=cds-WP_023194610.1;Parent=gene-CCO46_RS08275;Dbxref=GenBank:WP_023194610.1;Name=WP_023194610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=CCO46_RS08275;product=sodium:solute symporter;protein_id=WP_023194610.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 159974 160855 . + . ID=gene-CCO46_RS08280;Name=CCO46_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08280;old_locus_tag=CCO46_08280 NZ_NPOH01000005.1 Protein Homology CDS 159974 160855 . + 0 ID=cds-WP_000433673.1;Parent=gene-CCO46_RS08280;Dbxref=GenBank:WP_000433673.1;Name=WP_000433673.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=CCO46_RS08280;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000433673.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 160960 161748 . - . ID=gene-CCO46_RS08285;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=CCO46_RS08285;old_locus_tag=CCO46_08285 NZ_NPOH01000005.1 Protein Homology CDS 160960 161748 . - 0 ID=cds-WP_000533527.1;Parent=gene-CCO46_RS08285;Dbxref=GenBank:WP_000533527.1;Name=WP_000533527.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=CCO46_RS08285;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533527.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 162441 164717 . + . ID=gene-CCO46_RS08295;Name=CCO46_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08295;old_locus_tag=CCO46_08295 NZ_NPOH01000005.1 Protein Homology CDS 162441 164717 . + 0 ID=cds-WP_078057654.1;Parent=gene-CCO46_RS08295;Dbxref=GenBank:WP_078057654.1;Name=WP_078057654.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: protein motif:HMM:NF025849.6;locus_tag=CCO46_RS08295;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WP_078057654.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 164842 165033 . + . ID=gene-CCO46_RS08300;Name=CCO46_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08300;old_locus_tag=CCO46_08300 NZ_NPOH01000005.1 Protein Homology CDS 164842 165033 . + 0 ID=cds-WP_078057653.1;Parent=gene-CCO46_RS08300;Dbxref=GenBank:WP_078057653.1;Name=WP_078057653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023884.6;locus_tag=CCO46_RS08300;product=leucine-rich repeat domain-containing protein;protein_id=WP_078057653.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 165236 166744 . - . ID=gene-CCO46_RS08305;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CCO46_RS08305;old_locus_tag=CCO46_08305 NZ_NPOH01000005.1 Protein Homology CDS 165236 166744 . - 0 ID=cds-WP_058331351.1;Parent=gene-CCO46_RS08305;Dbxref=GenBank:WP_058331351.1;Name=WP_058331351.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=CCO46_RS08305;product=sodium/proline symporter PutP;protein_id=WP_058331351.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 167166 171128 . + . ID=gene-CCO46_RS08315;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=CCO46_RS08315;old_locus_tag=CCO46_08315 NZ_NPOH01000005.1 Protein Homology CDS 167166 171128 . + 0 ID=cds-WP_094894457.1;Parent=gene-CCO46_RS08315;Dbxref=GenBank:WP_094894457.1;Name=WP_094894457.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=CCO46_RS08315;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_094894457.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 171187 171582 . + . ID=gene-CCO46_RS08320;Name=CCO46_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08320;old_locus_tag=CCO46_08320 NZ_NPOH01000005.1 Protein Homology CDS 171187 171582 . + 0 ID=cds-WP_000821059.1;Parent=gene-CCO46_RS08320;Dbxref=GenBank:WP_000821059.1;Name=WP_000821059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=CCO46_RS08320;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821059.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 171579 172217 . - . ID=gene-CCO46_RS08325;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=CCO46_RS08325;old_locus_tag=CCO46_08325 NZ_NPOH01000005.1 Protein Homology CDS 171579 172217 . - 0 ID=cds-WP_000083128.1;Parent=gene-CCO46_RS08325;Dbxref=GenBank:WP_000083128.1;Name=WP_000083128.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=CCO46_RS08325;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083128.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 172354 172521 . - . ID=gene-CCO46_RS08330;Name=CCO46_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08330;old_locus_tag=CCO46_08330 NZ_NPOH01000005.1 Protein Homology CDS 172354 172521 . - 0 ID=cds-WP_001273663.1;Parent=gene-CCO46_RS08330;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=CCO46_RS08330;product=general stress protein;protein_id=WP_001273663.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 172906 173502 . + . ID=gene-CCO46_RS08335;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=CCO46_RS08335;old_locus_tag=CCO46_08335 NZ_NPOH01000005.1 Protein Homology CDS 172906 173502 . + 0 ID=cds-WP_001062898.1;Parent=gene-CCO46_RS08335;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=CCO46_RS08335;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 173523 173750 . + . ID=gene-CCO46_RS08340;Name=CCO46_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08340;old_locus_tag=CCO46_08340 NZ_NPOH01000005.1 Protein Homology CDS 173523 173750 . + 0 ID=cds-WP_001143125.1;Parent=gene-CCO46_RS08340;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=CCO46_RS08340;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 173784 175025 . - . ID=gene-CCO46_RS08345;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=CCO46_RS08345;old_locus_tag=CCO46_08345 NZ_NPOH01000005.1 Protein Homology CDS 173784 175025 . - 0 ID=cds-WP_000749201.1;Parent=gene-CCO46_RS08345;Dbxref=GenBank:WP_000749201.1;Name=WP_000749201.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=CCO46_RS08345;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_000749201.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 175158 175664 . - . ID=gene-CCO46_RS08350;Name=CCO46_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08350;old_locus_tag=CCO46_08350 NZ_NPOH01000005.1 Protein Homology CDS 175158 175664 . - 0 ID=cds-WP_023201793.1;Parent=gene-CCO46_RS08350;Dbxref=GenBank:WP_023201793.1;Name=WP_023201793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=CCO46_RS08350;product=protein disulfide oxidoreductase;protein_id=WP_023201793.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 175654 176277 . - . ID=gene-CCO46_RS08355;Name=CCO46_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08355;old_locus_tag=CCO46_08355 NZ_NPOH01000005.1 Protein Homology CDS 175654 176277 . - 0 ID=cds-WP_023201792.1;Parent=gene-CCO46_RS08355;Dbxref=GenBank:WP_023201792.1;Name=WP_023201792.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=CCO46_RS08355;product=DsbA family protein;protein_id=WP_023201792.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 176274 178160 . - . ID=gene-CCO46_RS08360;Name=CCO46_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08360;old_locus_tag=CCO46_08360 NZ_NPOH01000005.1 Protein Homology CDS 176274 178160 . - 0 ID=cds-WP_023201791.1;Parent=gene-CCO46_RS08360;Dbxref=GenBank:WP_023201791.1;Name=WP_023201791.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=CCO46_RS08360;product=protein-disulfide reductase DsbD family protein;protein_id=WP_023201791.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 178209 178571 . - . ID=gene-CCO46_RS08365;Name=CCO46_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08365;old_locus_tag=CCO46_08365 NZ_NPOH01000005.1 Protein Homology CDS 178209 178571 . - 0 ID=cds-WP_058331350.1;Parent=gene-CCO46_RS08365;Dbxref=GenBank:WP_058331350.1;Name=WP_058331350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=CCO46_RS08365;product=hypothetical protein;protein_id=WP_058331350.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 178806 179726 . + . ID=gene-CCO46_RS08375;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=CCO46_RS08375;old_locus_tag=CCO46_08375 NZ_NPOH01000005.1 Protein Homology CDS 178806 179726 . + 0 ID=cds-WP_023198956.1;Parent=gene-CCO46_RS08375;Dbxref=GenBank:WP_023198956.1;Name=WP_023198956.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=CCO46_RS08375;product=curved DNA-binding protein;protein_id=WP_023198956.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 179726 180031 . + . ID=gene-CCO46_RS08380;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=CCO46_RS08380;old_locus_tag=CCO46_08380 NZ_NPOH01000005.1 Protein Homology CDS 179726 180031 . + 0 ID=cds-WP_001284251.1;Parent=gene-CCO46_RS08380;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=CCO46_RS08380;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 180685 181047 . + . ID=gene-CCO46_RS08390;Name=CCO46_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08390;old_locus_tag=CCO46_08390 NZ_NPOH01000005.1 Protein Homology CDS 180685 181047 . + 0 ID=cds-WP_001537781.1;Parent=gene-CCO46_RS08390;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=CCO46_RS08390;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 181455 182393 . - . ID=gene-CCO46_RS08395;Name=CCO46_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08395;old_locus_tag=CCO46_08395 NZ_NPOH01000005.1 Protein Homology CDS 181455 182393 . - 0 ID=cds-WP_000976561.1;Parent=gene-CCO46_RS08395;Dbxref=GenBank:WP_000976561.1;Name=WP_000976561.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=CCO46_RS08395;product=MBL fold metallo-hydrolase;protein_id=WP_000976561.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 182407 183303 . - . ID=gene-CCO46_RS08400;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=CCO46_RS08400;old_locus_tag=CCO46_08400 NZ_NPOH01000005.1 Protein Homology CDS 182407 183303 . - 0 ID=cds-WP_000336602.1;Parent=gene-CCO46_RS08400;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=CCO46_RS08400;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 183313 184689 . - . ID=gene-CCO46_RS08405;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=CCO46_RS08405;old_locus_tag=CCO46_08405 NZ_NPOH01000005.1 Protein Homology CDS 183313 184689 . - 0 ID=cds-WP_001285803.1;Parent=gene-CCO46_RS08405;Dbxref=GenBank:WP_001285803.1;Name=WP_001285803.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=CCO46_RS08405;product=4-hydroxyphenylacetate permease;protein_id=WP_001285803.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 184762 185553 . - . ID=gene-CCO46_RS08410;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=CCO46_RS08410;old_locus_tag=CCO46_08410 NZ_NPOH01000005.1 Protein Homology CDS 184762 185553 . - 0 ID=cds-WP_023216405.1;Parent=gene-CCO46_RS08410;Dbxref=GenBank:WP_023216405.1;Name=WP_023216405.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=CCO46_RS08410;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_023216405.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 185564 186367 . - . ID=gene-CCO46_RS08415;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=CCO46_RS08415;old_locus_tag=CCO46_08415 NZ_NPOH01000005.1 Protein Homology CDS 185564 186367 . - 0 ID=cds-WP_000884795.1;Parent=gene-CCO46_RS08415;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=CCO46_RS08415;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 186511 186891 . - . ID=gene-CCO46_RS08425;Name=CCO46_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08425;old_locus_tag=CCO46_08425 NZ_NPOH01000005.1 Protein Homology CDS 186511 186891 . - 0 ID=cds-WP_001119852.1;Parent=gene-CCO46_RS08425;Dbxref=GenBank:WP_001119852.1;Name=WP_001119852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=CCO46_RS08425;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119852.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 186901 187752 . - . ID=gene-CCO46_RS08430;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=CCO46_RS08430;old_locus_tag=CCO46_08430 NZ_NPOH01000005.1 Protein Homology CDS 186901 187752 . - 0 ID=cds-WP_000516978.1;Parent=gene-CCO46_RS08430;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=CCO46_RS08430;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 187754 189220 . - . ID=gene-CCO46_RS08435;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=CCO46_RS08435;old_locus_tag=CCO46_08435 NZ_NPOH01000005.1 Protein Homology CDS 187754 189220 . - 0 ID=cds-WP_000723524.1;Parent=gene-CCO46_RS08435;Dbxref=GenBank:WP_000723524.1;Name=WP_000723524.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=CCO46_RS08435;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723524.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 189217 190506 . - . ID=gene-CCO46_RS08440;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=CCO46_RS08440;old_locus_tag=CCO46_08440 NZ_NPOH01000005.1 Protein Homology CDS 189217 190506 . - 0 ID=cds-WP_058331349.1;Parent=gene-CCO46_RS08440;Dbxref=GenBank:WP_058331349.1;Name=WP_058331349.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=CCO46_RS08440;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_058331349.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 190781 191221 . + . ID=gene-CCO46_RS08445;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=CCO46_RS08445;old_locus_tag=CCO46_08445 NZ_NPOH01000005.1 Protein Homology CDS 190781 191221 . + 0 ID=cds-WP_000543922.1;Parent=gene-CCO46_RS08445;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=CCO46_RS08445;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 191439 193001 . + . ID=gene-CCO46_RS08450;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=CCO46_RS08450;old_locus_tag=CCO46_08450 NZ_NPOH01000005.1 Protein Homology CDS 191439 193001 . + 0 ID=cds-WP_097363299.1;Parent=gene-CCO46_RS08450;Dbxref=GenBank:WP_097363299.1;Name=WP_097363299.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=CCO46_RS08450;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_097363299.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 193019 193531 . + . ID=gene-CCO46_RS08455;Name=CCO46_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08455;old_locus_tag=CCO46_08455 NZ_NPOH01000005.1 Protein Homology CDS 193019 193531 . + 0 ID=cds-WP_001195556.1;Parent=gene-CCO46_RS08455;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=CCO46_RS08455;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 193864 194274 . - . ID=gene-CCO46_RS08465;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=CCO46_RS08465;old_locus_tag=CCO46_08465 NZ_NPOH01000005.1 Protein Homology CDS 193864 194274 . - 0 ID=cds-WP_000833182.1;Parent=gene-CCO46_RS08465;Dbxref=GenBank:WP_000833182.1;Name=WP_000833182.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=CCO46_RS08465;product=hydroxyisourate hydrolase;protein_id=WP_000833182.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 194410 195090 . + . ID=gene-CCO46_RS08470;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=CCO46_RS08470;old_locus_tag=CCO46_08470 NZ_NPOH01000005.1 Protein Homology CDS 194410 195090 . + 0 ID=cds-WP_140439313.1;Parent=gene-CCO46_RS08470;Dbxref=GenBank:WP_140439313.1;Name=WP_140439313.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=CCO46_RS08470;product=response regulator transcription factor HprR;protein_id=WP_140439313.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 195083 196447 . + . ID=gene-CCO46_RS08475;Name=CCO46_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08475;old_locus_tag=CCO46_08475 NZ_NPOH01000005.1 Protein Homology CDS 195083 196447 . + 0 ID=cds-WP_097363301.1;Parent=gene-CCO46_RS08475;Dbxref=GenBank:WP_097363301.1;Name=WP_097363301.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=CCO46_RS08475;product=heavy metal sensor histidine kinase;protein_id=WP_097363301.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 196620 198089 . + . ID=gene-CCO46_RS08480;Name=CCO46_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08480;old_locus_tag=CCO46_08480 NZ_NPOH01000005.1 Protein Homology CDS 196620 198089 . + 0 ID=cds-WP_097363302.1;Parent=gene-CCO46_RS08480;Dbxref=GenBank:WP_097363302.1;Name=WP_097363302.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=CCO46_RS08480;product=C69 family dipeptidase;protein_id=WP_097363302.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 198198 198308 . + . ID=gene-CCO46_RS08485;Name=CCO46_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08485;old_locus_tag=CCO46_08485 NZ_NPOH01000005.1 Protein Homology CDS 198198 198308 . + 0 ID=cds-WP_020898651.1;Parent=gene-CCO46_RS08485;Dbxref=GenBank:WP_020898651.1;Name=WP_020898651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=CCO46_RS08485;product=hypothetical protein;protein_id=WP_020898651.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 198309 198479 . - . ID=gene-CCO46_RS08490;Name=CCO46_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08490;old_locus_tag=CCO46_08490 NZ_NPOH01000005.1 Protein Homology CDS 198309 198479 . - 0 ID=cds-WP_001111006.1;Parent=gene-CCO46_RS08490;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=CCO46_RS08490;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 198811 200496 . + . ID=gene-CCO46_RS08495;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=CCO46_RS08495;old_locus_tag=CCO46_08495 NZ_NPOH01000005.1 Protein Homology CDS 198811 200496 . + 0 ID=cds-WP_058331347.1;Parent=gene-CCO46_RS08495;Dbxref=GenBank:WP_058331347.1;Name=WP_058331347.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=CCO46_RS08495;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_058331347.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 200513 200854 . + . ID=gene-CCO46_RS08500;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=CCO46_RS08500;old_locus_tag=CCO46_08500 NZ_NPOH01000005.1 Protein Homology CDS 200513 200854 . + 0 ID=cds-WP_058331346.1;Parent=gene-CCO46_RS08500;Dbxref=GenBank:WP_058331346.1;Name=WP_058331346.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=CCO46_RS08500;product=type III secretion system chaperone SigE;protein_id=WP_058331346.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 200864 201184 . - . ID=gene-CCO46_RS08505;Name=CCO46_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08505;old_locus_tag=CCO46_08505 NZ_NPOH01000005.1 Protein Homology CDS 200864 201184 . - 0 ID=cds-WP_094887597.1;Parent=gene-CCO46_RS08505;Dbxref=GenBank:WP_094887597.1;Name=WP_094887597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=CCO46_RS08505;product=hypothetical protein;protein_id=WP_094887597.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 201286 201444 . + . ID=gene-CCO46_RS25825;Name=CCO46_RS25825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25825 NZ_NPOH01000005.1 Protein Homology CDS 201286 201444 . + 0 ID=cds-WP_423825467.1;Parent=gene-CCO46_RS25825;Dbxref=GenBank:WP_423825467.1;Name=WP_423825467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=CCO46_RS25825;product=hypothetical protein;protein_id=WP_423825467.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 201871 203850 . - . ID=gene-CCO46_RS08520;Name=CCO46_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08520;old_locus_tag=CCO46_08520 NZ_NPOH01000005.1 Protein Homology CDS 201871 203850 . - 0 ID=cds-WP_001237397.1;Parent=gene-CCO46_RS08520;Dbxref=GenBank:WP_001237397.1;Name=WP_001237397.1;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078314.1;locus_tag=CCO46_RS08520;product=alkyl/aryl-sulfatase;protein_id=WP_001237397.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 204246 205376 . + . ID=gene-CCO46_RS08525;Name=CCO46_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08525;old_locus_tag=CCO46_08525 NZ_NPOH01000005.1 Protein Homology CDS 204246 205376 . + 0 ID=cds-WP_076726369.1;Parent=gene-CCO46_RS08525;Dbxref=GenBank:WP_076726369.1;Name=WP_076726369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529511.1;locus_tag=CCO46_RS08525;product=GGDEF domain-containing protein;protein_id=WP_076726369.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 205692 205779 . - . ID=gene-CCO46_RS08530;Name=CCO46_RS08530;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS08530;old_locus_tag=CCO46_08530 NZ_NPOH01000005.1 tRNAscan-SE tRNA 205692 205779 . - . ID=rna-CCO46_RS08530;Parent=gene-CCO46_RS08530;anticodon=(pos:complement(205743..205745));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS08530;product=tRNA-Ser NZ_NPOH01000005.1 tRNAscan-SE exon 205692 205779 . - . ID=exon-CCO46_RS08530-1;Parent=rna-CCO46_RS08530;anticodon=(pos:complement(205743..205745));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS08530;product=tRNA-Ser NZ_NPOH01000005.1 RefSeq gene 206174 206833 . + . ID=gene-CCO46_RS08535;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=CCO46_RS08535;old_locus_tag=CCO46_08535 NZ_NPOH01000005.1 Protein Homology CDS 206174 206833 . + 0 ID=cds-WP_000374046.1;Parent=gene-CCO46_RS08535;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=CCO46_RS08535;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 206920 207249 . + . ID=gene-CCO46_RS08540;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=CCO46_RS08540;old_locus_tag=CCO46_08540 NZ_NPOH01000005.1 Protein Homology CDS 206920 207249 . + 0 ID=cds-WP_000904449.1;Parent=gene-CCO46_RS08540;Dbxref=GenBank:WP_000904449.1;Name=WP_000904449.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=CCO46_RS08540;product=sulfurtransferase TusE;protein_id=WP_000904449.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 207246 207527 . - . ID=gene-CCO46_RS08545;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=CCO46_RS08545;old_locus_tag=CCO46_08545 NZ_NPOH01000005.1 Protein Homology CDS 207246 207527 . - 0 ID=cds-WP_000072884.1;Parent=gene-CCO46_RS08545;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=CCO46_RS08545;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 207576 208355 . - . ID=gene-CCO46_RS08550;Name=CCO46_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08550;old_locus_tag=CCO46_08550 NZ_NPOH01000005.1 Protein Homology CDS 207576 208355 . - 0 ID=cds-WP_000548082.1;Parent=gene-CCO46_RS08550;Dbxref=GenBank:WP_000548082.1;Name=WP_000548082.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=CCO46_RS08550;product=helix-turn-helix transcriptional regulator;protein_id=WP_000548082.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 208381 208929 . - . ID=gene-CCO46_RS08555;Name=CCO46_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08555;old_locus_tag=CCO46_08555 NZ_NPOH01000005.1 Protein Homology CDS 208381 208929 . - 0 ID=cds-WP_045340693.1;Parent=gene-CCO46_RS08555;Dbxref=GenBank:WP_045340693.1;Name=WP_045340693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=CCO46_RS08555;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_045340693.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 209144 210355 . + . ID=gene-CCO46_RS08560;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=CCO46_RS08560;old_locus_tag=CCO46_08560 NZ_NPOH01000005.1 Protein Homology CDS 209144 210355 . + 0 ID=cds-WP_000140480.1;Parent=gene-CCO46_RS08560;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=CCO46_RS08560;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 210413 210730 . + . ID=gene-CCO46_RS08565;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=CCO46_RS08565;old_locus_tag=CCO46_08565 NZ_NPOH01000005.1 Protein Homology CDS 210413 210730 . + 0 ID=cds-WP_000561983.1;Parent=gene-CCO46_RS08565;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=CCO46_RS08565;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 210775 211188 . - . ID=gene-CCO46_RS08570;Name=CCO46_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08570;old_locus_tag=CCO46_08570 NZ_NPOH01000005.1 Protein Homology CDS 210775 211188 . - 0 ID=cds-WP_031605205.1;Parent=gene-CCO46_RS08570;Dbxref=GenBank:WP_031605205.1;Name=WP_031605205.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=CCO46_RS08570;product=CoA-binding protein;protein_id=WP_031605205.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 211362 212024 . + . ID=gene-CCO46_RS08575;Name=CCO46_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08575;old_locus_tag=CCO46_08575 NZ_NPOH01000005.1 Protein Homology CDS 211362 212024 . + 0 ID=cds-WP_000847719.1;Parent=gene-CCO46_RS08575;Dbxref=GenBank:WP_000847719.1;Name=WP_000847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=CCO46_RS08575;product=DUF2057 family protein;protein_id=WP_000847719.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 212119 212577 . + . ID=gene-CCO46_RS08580;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=CCO46_RS08580;old_locus_tag=CCO46_08580 NZ_NPOH01000005.1 Protein Homology CDS 212119 212577 . + 0 ID=cds-WP_000424187.1;Parent=gene-CCO46_RS08580;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=CCO46_RS08580;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 212613 214667 . - . ID=gene-CCO46_RS08585;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=CCO46_RS08585;old_locus_tag=CCO46_08585 NZ_NPOH01000005.1 Protein Homology CDS 212613 214667 . - 0 ID=cds-WP_000420523.1;Parent=gene-CCO46_RS08585;Dbxref=GenBank:WP_000420523.1;Name=WP_000420523.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=CCO46_RS08585;product=DNA helicase IV;protein_id=WP_000420523.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 214791 215237 . + . ID=gene-CCO46_RS08590;Name=CCO46_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08590;old_locus_tag=CCO46_08590 NZ_NPOH01000005.1 Protein Homology CDS 214791 215237 . + 0 ID=cds-WP_001261222.1;Parent=gene-CCO46_RS08590;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=CCO46_RS08590;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 215256 217409 . + . ID=gene-CCO46_RS08595;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=CCO46_RS08595;old_locus_tag=CCO46_08595 NZ_NPOH01000005.1 Protein Homology CDS 215256 217409 . + 0 ID=cds-WP_000950876.1;Parent=gene-CCO46_RS08595;Dbxref=GenBank:WP_000950876.1;Name=WP_000950876.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=CCO46_RS08595;product=YccS family putative transporter;protein_id=WP_000950876.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 217396 218001 . - . ID=gene-CCO46_RS08600;Name=CCO46_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08600;old_locus_tag=CCO46_08600 NZ_NPOH01000005.1 Protein Homology CDS 217396 218001 . - 0 ID=cds-WP_001202375.1;Parent=gene-CCO46_RS08600;Dbxref=GenBank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=CCO46_RS08600;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 218218 218727 . + . ID=gene-CCO46_RS08605;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=CCO46_RS08605;old_locus_tag=CCO46_08605 NZ_NPOH01000005.1 Protein Homology CDS 218218 218727 . + 0 ID=cds-WP_000288732.1;Parent=gene-CCO46_RS08605;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=CCO46_RS08605;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 219084 220136 . + . ID=gene-CCO46_RS08610;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=CCO46_RS08610;old_locus_tag=CCO46_08610 NZ_NPOH01000005.1 Protein Homology CDS 219084 220136 . + 0 ID=cds-WP_001670727.1;Parent=gene-CCO46_RS08610;Dbxref=GenBank:WP_001670727.1;Name=WP_001670727.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=CCO46_RS08610;product=porin OmpA;protein_id=WP_001670727.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 220208 220660 . - . ID=gene-CCO46_RS08615;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=CCO46_RS08615;old_locus_tag=CCO46_08615 NZ_NPOH01000005.1 Protein Homology CDS 220208 220660 . - 0 ID=cds-WP_000877172.1;Parent=gene-CCO46_RS08615;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=CCO46_RS08615;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 220846 222606 . + . ID=gene-CCO46_RS08620;Name=CCO46_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08620;old_locus_tag=CCO46_08620 NZ_NPOH01000005.1 Protein Homology CDS 220846 222606 . + 0 ID=cds-WP_000156454.1;Parent=gene-CCO46_RS08620;Dbxref=GenBank:WP_000156454.1;Name=WP_000156454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=CCO46_RS08620;product=AAA family ATPase;protein_id=WP_000156454.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 222675 223193 . + . ID=gene-CCO46_RS08625;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=CCO46_RS08625;old_locus_tag=CCO46_08625 NZ_NPOH01000005.1 Protein Homology CDS 222675 223193 . + 0 ID=cds-WP_000227928.1;Parent=gene-CCO46_RS08625;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=CCO46_RS08625;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 223293 223460 . - . ID=gene-CCO46_RS08630;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=CCO46_RS08630;old_locus_tag=CCO46_08630 NZ_NPOH01000005.1 Protein Homology CDS 223293 223460 . - 0 ID=cds-WP_001537784.1;Parent=gene-CCO46_RS08630;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=CCO46_RS08630;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 223716 224279 . - . ID=gene-CCO46_RS08635;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=CCO46_RS08635;old_locus_tag=CCO46_08635 NZ_NPOH01000005.1 Protein Homology CDS 223716 224279 . - 0 ID=cds-WP_000759136.1;Parent=gene-CCO46_RS08635;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=CCO46_RS08635;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 224276 225916 . - . ID=gene-CCO46_RS08640;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=CCO46_RS08640;old_locus_tag=CCO46_08640 NZ_NPOH01000005.1 Protein Homology CDS 224276 225916 . - 0 ID=cds-WP_000433414.1;Parent=gene-CCO46_RS08640;Dbxref=GenBank:WP_000433414.1;Name=WP_000433414.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=CCO46_RS08640;product=intermembrane transport protein PqiB;protein_id=WP_000433414.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 225921 227174 . - . ID=gene-CCO46_RS08645;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=CCO46_RS08645;old_locus_tag=CCO46_08645 NZ_NPOH01000005.1 Protein Homology CDS 225921 227174 . - 0 ID=cds-WP_076726365.1;Parent=gene-CCO46_RS08645;Dbxref=GenBank:WP_076726365.1;Name=WP_076726365.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=CCO46_RS08645;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_076726365.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 227189 229096 . - . ID=gene-CCO46_RS08650;Name=CCO46_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08650;old_locus_tag=CCO46_08650 NZ_NPOH01000005.1 Protein Homology CDS 227189 229096 . - 0 ID=cds-WP_000053051.1;Parent=gene-CCO46_RS08650;Dbxref=GenBank:WP_000053051.1;Name=WP_000053051.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=CCO46_RS08650;product=ABC transporter ATP-binding protein;protein_id=WP_000053051.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 229109 231217 . - . ID=gene-CCO46_RS08655;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=CCO46_RS08655;old_locus_tag=CCO46_08655 NZ_NPOH01000005.1 Protein Homology CDS 229109 231217 . - 0 ID=cds-WP_061372468.1;Parent=gene-CCO46_RS08655;Dbxref=GenBank:WP_061372468.1;Name=WP_061372468.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=CCO46_RS08655;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_061372468.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 231316 232425 . + . ID=gene-CCO46_RS08660;Name=CCO46_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08660;old_locus_tag=CCO46_08660 NZ_NPOH01000005.1 Protein Homology CDS 231316 232425 . + 0 ID=cds-WP_097363303.1;Parent=gene-CCO46_RS08660;Dbxref=GenBank:WP_097363303.1;Name=WP_097363303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=CCO46_RS08660;product=YcbX family protein;protein_id=WP_097363303.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 232422 232964 . - . ID=gene-CCO46_RS08665;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=CCO46_RS08665;old_locus_tag=CCO46_08665 NZ_NPOH01000005.1 Protein Homology CDS 232422 232964 . - 0 ID=cds-WP_001220671.1;Parent=gene-CCO46_RS08665;Dbxref=GenBank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=CCO46_RS08665;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 233130 234140 . - . ID=gene-CCO46_RS08670;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=CCO46_RS08670;old_locus_tag=CCO46_08670 NZ_NPOH01000005.1 Protein Homology CDS 233130 234140 . - 0 ID=cds-WP_000291723.1;Parent=gene-CCO46_RS08670;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=CCO46_RS08670;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 234348 236960 . - . ID=gene-CCO46_RS08675;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=CCO46_RS08675;old_locus_tag=CCO46_08675 NZ_NPOH01000005.1 Protein Homology CDS 234348 236960 . - 0 ID=cds-WP_000193775.1;Parent=gene-CCO46_RS08675;Dbxref=GenBank:WP_000193775.1;Name=WP_000193775.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=CCO46_RS08675;product=aminopeptidase N;protein_id=WP_000193775.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 237227 238429 . + . ID=gene-CCO46_RS08680;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=CCO46_RS08680;old_locus_tag=CCO46_08680 NZ_NPOH01000005.1 Protein Homology CDS 237227 238429 . + 0 ID=cds-WP_000191406.1;Parent=gene-CCO46_RS08680;Dbxref=GenBank:WP_000191406.1;Name=WP_000191406.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=CCO46_RS08680;product=nicotinate phosphoribosyltransferase;protein_id=WP_000191406.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 238510 239943 . - . ID=gene-CCO46_RS08685;Name=CCO46_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08685;old_locus_tag=CCO46_08685 NZ_NPOH01000005.1 Protein Homology CDS 238510 239943 . - 0 ID=cds-WP_097363304.1;Parent=gene-CCO46_RS08685;Dbxref=GenBank:WP_097363304.1;Name=WP_097363304.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=CCO46_RS08685;product=alanine/glycine:cation symporter family protein;protein_id=WP_097363304.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 240189 241403 . - . ID=gene-CCO46_RS08690;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=CCO46_RS08690;old_locus_tag=CCO46_08690 NZ_NPOH01000005.1 Protein Homology CDS 240189 241403 . - 0 ID=cds-WP_000544858.1;Parent=gene-CCO46_RS08690;Dbxref=GenBank:WP_000544858.1;Name=WP_000544858.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=CCO46_RS08690;product=diaminopropionate ammonia-lyase;protein_id=WP_000544858.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 241721 242182 . + . ID=gene-CCO46_RS08700;Name=CCO46_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08700;old_locus_tag=CCO46_08700 NZ_NPOH01000005.1 Protein Homology CDS 241721 242182 . + 0 ID=cds-WP_080208081.1;Parent=gene-CCO46_RS08700;Dbxref=GenBank:WP_080208081.1;Name=WP_080208081.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=CCO46_RS08700;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_080208081.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 242383 243783 . + . ID=gene-CCO46_RS08705;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CCO46_RS08705;old_locus_tag=CCO46_08705 NZ_NPOH01000005.1 Protein Homology CDS 242383 243783 . + 0 ID=cds-WP_023201779.1;Parent=gene-CCO46_RS08705;Dbxref=GenBank:WP_023201779.1;Name=WP_023201779.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=CCO46_RS08705;product=asparagine--tRNA ligase;protein_id=WP_023201779.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 244389 245480 . + . ID=gene-CCO46_RS08710;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=CCO46_RS08710;old_locus_tag=CCO46_08710 NZ_NPOH01000005.1 Protein Homology CDS 244389 245480 . + 0 ID=cds-WP_000977709.1;Parent=gene-CCO46_RS08710;Dbxref=GenBank:WP_000977709.1;Name=WP_000977709.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=CCO46_RS08710;product=porin OmpF;protein_id=WP_000977709.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 245665 246855 . + . ID=gene-CCO46_RS08715;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=CCO46_RS08715;old_locus_tag=CCO46_08715 NZ_NPOH01000005.1 Protein Homology CDS 245665 246855 . + 0 ID=cds-WP_000462653.1;Parent=gene-CCO46_RS08715;Dbxref=GenBank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=CCO46_RS08715;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 246917 247564 . - . ID=gene-CCO46_RS08720;Name=CCO46_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08720;old_locus_tag=CCO46_08720 NZ_NPOH01000005.1 Protein Homology CDS 246917 247564 . - 0 ID=cds-WP_001109471.1;Parent=gene-CCO46_RS08720;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=CCO46_RS08720;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 247592 248140 . - . ID=gene-CCO46_RS08725;Name=CCO46_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08725;old_locus_tag=CCO46_08725 NZ_NPOH01000005.1 Protein Homology CDS 247592 248140 . - 0 ID=cds-WP_000357052.1;Parent=gene-CCO46_RS08725;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=CCO46_RS08725;product=YcbK family protein;protein_id=WP_000357052.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 248400 250247 . - . ID=gene-CCO46_RS08735;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=CCO46_RS08735;old_locus_tag=CCO46_08735 NZ_NPOH01000005.1 Protein Homology CDS 248400 250247 . - 0 ID=cds-WP_042949468.1;Parent=gene-CCO46_RS08735;Dbxref=GenBank:WP_042949468.1;Name=WP_042949468.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=CCO46_RS08735;product=L%2CD-transpeptidase;protein_id=WP_042949468.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 250592 255058 . - . ID=gene-CCO46_RS08740;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=CCO46_RS08740;old_locus_tag=CCO46_08740 NZ_NPOH01000005.1 Protein Homology CDS 250592 255058 . - 0 ID=cds-WP_097363305.1;Parent=gene-CCO46_RS08740;Dbxref=GenBank:WP_097363305.1;Name=WP_097363305.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=CCO46_RS08740;product=chromosome partition protein MukB;protein_id=WP_097363305.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 255058 255762 . - . ID=gene-CCO46_RS08745;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=CCO46_RS08745;old_locus_tag=CCO46_08745 NZ_NPOH01000005.1 Protein Homology CDS 255058 255762 . - 0 ID=cds-WP_000060025.1;Parent=gene-CCO46_RS08745;Dbxref=GenBank:WP_000060025.1;Name=WP_000060025.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=CCO46_RS08745;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 255743 257065 . - . ID=gene-CCO46_RS08750;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=CCO46_RS08750;old_locus_tag=CCO46_08750 NZ_NPOH01000005.1 Protein Homology CDS 255743 257065 . - 0 ID=cds-WP_001288828.1;Parent=gene-CCO46_RS08750;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=CCO46_RS08750;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 257058 257861 . - . ID=gene-CCO46_RS08755;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=CCO46_RS08755;old_locus_tag=CCO46_08755 NZ_NPOH01000005.1 Protein Homology CDS 257058 257861 . - 0 ID=cds-WP_094887602.1;Parent=gene-CCO46_RS08755;Dbxref=GenBank:WP_094887602.1;Name=WP_094887602.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=CCO46_RS08755;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_094887602.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 257997 258773 . + . ID=gene-CCO46_RS08760;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=CCO46_RS08760;old_locus_tag=CCO46_08760 NZ_NPOH01000005.1 Protein Homology CDS 257997 258773 . + 0 ID=cds-WP_000899553.1;Parent=gene-CCO46_RS08760;Dbxref=GenBank:WP_000899553.1;Name=WP_000899553.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=CCO46_RS08760;product=envelope biogenesis factor ElyC;protein_id=WP_000899553.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 258753 259646 . - . ID=gene-CCO46_RS08765;Name=CCO46_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08765;old_locus_tag=CCO46_08765 NZ_NPOH01000005.1 Protein Homology CDS 258753 259646 . - 0 ID=cds-WP_000436889.1;Parent=gene-CCO46_RS08765;Dbxref=GenBank:WP_000436889.1;Name=WP_000436889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=CCO46_RS08765;product=YcbJ family phosphotransferase;protein_id=WP_000436889.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 259857 260603 . - . ID=gene-CCO46_RS08770;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=CCO46_RS08770;old_locus_tag=CCO46_08770 NZ_NPOH01000005.1 Protein Homology CDS 259857 260603 . - 0 ID=cds-WP_023237954.1;Parent=gene-CCO46_RS08770;Dbxref=GenBank:WP_023237954.1;Name=WP_023237954.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=CCO46_RS08770;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_023237954.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 260600 260782 . - . ID=gene-CCO46_RS08775;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=CCO46_RS08775;old_locus_tag=CCO46_08775 NZ_NPOH01000005.1 Protein Homology CDS 260600 260782 . - 0 ID=cds-WP_000350061.1;Parent=gene-CCO46_RS08775;Dbxref=GenBank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=CCO46_RS08775;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 260834 262066 . - . ID=gene-CCO46_RS08780;Name=CCO46_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08780;old_locus_tag=CCO46_08780 NZ_NPOH01000005.1 Protein Homology CDS 260834 262066 . - 0 ID=cds-WP_058331336.1;Parent=gene-CCO46_RS08780;Dbxref=GenBank:WP_058331336.1;Name=WP_058331336.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=CCO46_RS08780;product=winged helix-turn-helix domain-containing protein;protein_id=WP_058331336.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 262110 263087 . - . ID=gene-CCO46_RS08785;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=CCO46_RS08785;old_locus_tag=CCO46_08785 NZ_NPOH01000005.1 Protein Homology CDS 262110 263087 . - 0 ID=cds-WP_000561699.1;Parent=gene-CCO46_RS08785;Dbxref=GenBank:WP_000561699.1;Name=WP_000561699.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=CCO46_RS08785;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000561699.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 263084 264832 . - . ID=gene-CCO46_RS08790;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=CCO46_RS08790;old_locus_tag=CCO46_08790 NZ_NPOH01000005.1 Protein Homology CDS 263084 264832 . - 0 ID=cds-WP_000551246.1;Parent=gene-CCO46_RS08790;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=CCO46_RS08790;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 264869 267133 . - . ID=gene-CCO46_RS08795;Name=CCO46_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08795;old_locus_tag=CCO46_08795 NZ_NPOH01000005.1 Protein Homology CDS 264869 267133 . - 0 ID=cds-WP_058331335.1;Parent=gene-CCO46_RS08795;Dbxref=GenBank:WP_058331335.1;Name=WP_058331335.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=CCO46_RS08795;product=ComEC family protein;protein_id=WP_058331335.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 267363 267647 . - . ID=gene-CCO46_RS08800;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=CCO46_RS08800;old_locus_tag=CCO46_08800 NZ_NPOH01000005.1 Protein Homology CDS 267363 267647 . - 0 ID=cds-WP_000167332.1;Parent=gene-CCO46_RS08800;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=CCO46_RS08800;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 267803 269476 . - . ID=gene-CCO46_RS08805;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CCO46_RS08805;old_locus_tag=CCO46_08805 NZ_NPOH01000005.1 Protein Homology CDS 267803 269476 . - 0 ID=cds-WP_000140324.1;Parent=gene-CCO46_RS08805;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=CCO46_RS08805;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 269590 270273 . - . ID=gene-CCO46_RS08810;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CCO46_RS08810;old_locus_tag=CCO46_08810 NZ_NPOH01000005.1 Protein Homology CDS 269590 270273 . - 0 ID=cds-WP_000125003.1;Parent=gene-CCO46_RS08810;Dbxref=GenBank:WP_000125003.1;Name=WP_000125003.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=CCO46_RS08810;product=(d)CMP kinase;protein_id=WP_000125003.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 270446 271207 . - . ID=gene-CCO46_RS08815;Name=CCO46_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08815;old_locus_tag=CCO46_08815 NZ_NPOH01000005.1 Protein Homology CDS 270446 271207 . - 0 ID=cds-WP_000792301.1;Parent=gene-CCO46_RS08815;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=CCO46_RS08815;product=M48 family metallopeptidase;protein_id=WP_000792301.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 271350 272633 . - . ID=gene-CCO46_RS08820;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CCO46_RS08820;old_locus_tag=CCO46_08820 NZ_NPOH01000005.1 Protein Homology CDS 271350 272633 . - 0 ID=cds-WP_058331334.1;Parent=gene-CCO46_RS08820;Dbxref=GenBank:WP_058331334.1;Name=WP_058331334.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=CCO46_RS08820;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_058331334.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 272703 273791 . - . ID=gene-CCO46_RS08825;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=CCO46_RS08825;old_locus_tag=CCO46_08825 NZ_NPOH01000005.1 Protein Homology CDS 272703 273791 . - 0 ID=cds-WP_058331333.1;Parent=gene-CCO46_RS08825;Dbxref=GenBank:WP_058331333.1;Name=WP_058331333.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=CCO46_RS08825;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_058331333.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 273977 274669 . - . ID=gene-CCO46_RS08830;Name=CCO46_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08830;old_locus_tag=CCO46_08830 NZ_NPOH01000005.1 Protein Homology CDS 273977 274669 . - 0 ID=cds-WP_000642868.1;Parent=gene-CCO46_RS08830;Dbxref=GenBank:WP_000642868.1;Name=WP_000642868.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=CCO46_RS08830;product=DUF421 domain-containing protein;protein_id=WP_000642868.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 274806 276566 . + . ID=gene-CCO46_RS08835;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=CCO46_RS08835;old_locus_tag=CCO46_08835 NZ_NPOH01000005.1 Protein Homology CDS 274806 276566 . + 0 ID=cds-WP_058331354.1;Parent=gene-CCO46_RS08835;Dbxref=GenBank:WP_058331354.1;Name=WP_058331354.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=CCO46_RS08835;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_058331354.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 276971 277828 . + . ID=gene-CCO46_RS08840;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=CCO46_RS08840;old_locus_tag=CCO46_08840 NZ_NPOH01000005.1 Protein Homology CDS 276971 277828 . + 0 ID=cds-WP_000642539.1;Parent=gene-CCO46_RS08840;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=CCO46_RS08840;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 277888 280170 . + . ID=gene-CCO46_RS08845;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO46_RS08845;old_locus_tag=CCO46_08845 NZ_NPOH01000005.1 Protein Homology CDS 277888 280170 . + 0 ID=cds-WP_001292799.1;Parent=gene-CCO46_RS08845;Dbxref=GenBank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=CCO46_RS08845;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 280243 281202 . - . ID=gene-CCO46_RS08850;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=CCO46_RS08850;old_locus_tag=CCO46_08850 NZ_NPOH01000005.1 Protein Homology CDS 280243 281202 . - 0 ID=cds-WP_058331332.1;Parent=gene-CCO46_RS08850;Dbxref=GenBank:WP_058331332.1;Name=WP_058331332.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=CCO46_RS08850;product=type III secretion system effector SopD2;protein_id=WP_058331332.1;transl_table=11 NZ_NPOH01000005.1 RefSeq pseudogene 281318 281643 . + . ID=gene-CCO46_RS25440;Name=CCO46_RS25440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25440;pseudo=true NZ_NPOH01000005.1 Protein Homology CDS 281318 281643 . + 0 ID=cds-CCO46_RS25440;Parent=gene-CCO46_RS25440;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=CCO46_RS25440;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 281762 282559 . + . ID=gene-CCO46_RS08855;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CCO46_RS08855;old_locus_tag=CCO46_08855 NZ_NPOH01000005.1 Protein Homology CDS 281762 282559 . + 0 ID=cds-WP_000067928.1;Parent=gene-CCO46_RS08855;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=CCO46_RS08855;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 282852 284273 . - . ID=gene-CCO46_RS08860;Name=CCO46_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08860;old_locus_tag=CCO46_08860 NZ_NPOH01000005.1 Protein Homology CDS 282852 284273 . - 0 ID=cds-WP_001134264.1;Parent=gene-CCO46_RS08860;Dbxref=GenBank:WP_001134264.1;Name=WP_001134264.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=CCO46_RS08860;product=APC family permease;protein_id=WP_001134264.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 284491 285639 . - . ID=gene-CCO46_RS08865;Name=CCO46_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08865;old_locus_tag=CCO46_08865 NZ_NPOH01000005.1 Protein Homology CDS 284491 285639 . - 0 ID=cds-WP_000109274.1;Parent=gene-CCO46_RS08865;Dbxref=GenBank:WP_000109274.1;Name=WP_000109274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=CCO46_RS08865;product=MFS transporter;protein_id=WP_000109274.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 285989 286852 . - . ID=gene-CCO46_RS08870;Name=CCO46_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08870;old_locus_tag=CCO46_08870 NZ_NPOH01000005.1 Protein Homology CDS 285989 286852 . - 0 ID=cds-WP_000534681.1;Parent=gene-CCO46_RS08870;Dbxref=GenBank:WP_000534681.1;Name=WP_000534681.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=CCO46_RS08870;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534681.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 286854 287471 . - . ID=gene-CCO46_RS08875;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=CCO46_RS08875;old_locus_tag=CCO46_08875 NZ_NPOH01000005.1 Protein Homology CDS 286854 287471 . - 0 ID=cds-WP_000213069.1;Parent=gene-CCO46_RS08875;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO46_RS08875;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 287482 289926 . - . ID=gene-CCO46_RS08880;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=CCO46_RS08880;old_locus_tag=CCO46_08880 NZ_NPOH01000005.1 Protein Homology CDS 287482 289926 . - 0 ID=cds-WP_094947991.1;Parent=gene-CCO46_RS08880;Dbxref=GenBank:WP_094947991.1;Name=WP_094947991.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=CCO46_RS08880;product=dimethylsulfoxide reductase subunit A;protein_id=WP_094947991.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 290164 291456 . - . ID=gene-CCO46_RS08885;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CCO46_RS08885;old_locus_tag=CCO46_08885 NZ_NPOH01000005.1 Protein Homology CDS 290164 291456 . - 0 ID=cds-WP_000886697.1;Parent=gene-CCO46_RS08885;Dbxref=GenBank:WP_000886697.1;Name=WP_000886697.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=CCO46_RS08885;product=serine--tRNA ligase;protein_id=WP_000886697.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 291715 293058 . - . ID=gene-CCO46_RS08890;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=CCO46_RS08890;old_locus_tag=CCO46_08890 NZ_NPOH01000005.1 Protein Homology CDS 291715 293058 . - 0 ID=cds-WP_000067785.1;Parent=gene-CCO46_RS08890;Dbxref=GenBank:WP_000067785.1;Name=WP_000067785.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=CCO46_RS08890;product=replication-associated recombination protein RarA;protein_id=WP_000067785.1;transl_table=11 NZ_NPOH01000005.1 RefSeq gene 293068 293679 . - . ID=gene-CCO46_RS08895;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=CCO46_RS08895;old_locus_tag=CCO46_08895 NZ_NPOH01000005.1 Protein Homology CDS 293068 293679 . - 0 ID=cds-WP_058331330.1;Parent=gene-CCO46_RS08895;Dbxref=GenBank:WP_058331330.1;Name=WP_058331330.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=CCO46_RS08895;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_058331330.1;transl_table=11 NZ_NPOH01000005.1 RefSeq pseudogene 293822 295553 . - . ID=gene-CCO46_RS08900;Name=ftsK;end_range=295553,.;gbkey=Gene;gene=ftsK;gene_biotype=pseudogene;locus_tag=CCO46_RS08900;old_locus_tag=CCO46_08900;partial=true;pseudo=true NZ_NPOH01000005.1 Protein Homology CDS 293822 295553 . - 1 ID=cds-CCO46_RS08900;Parent=gene-CCO46_RS08900;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=295553,.;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519500.1;locus_tag=CCO46_RS08900;partial=true;product=DNA translocase FtsK;pseudo=true;transl_table=11 ##sequence-region NZ_NPOH01000006.1 1 235241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000006.1 RefSeq region 1 235241 . + . ID=NZ_NPOH01000006.1:1..235241;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000006.1 RefSeq gene 80 328 . - . ID=gene-CCO46_RS08905;Name=CCO46_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08905;old_locus_tag=CCO46_08905 NZ_NPOH01000006.1 Protein Homology CDS 80 328 . - 0 ID=cds-WP_000208086.1;Parent=gene-CCO46_RS08905;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=CCO46_RS08905;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11 NZ_NPOH01000006.1 RefSeq pseudogene 407 561 . - . ID=gene-CCO46_RS25445;Name=CCO46_RS25445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25445;old_locus_tag=CCO46_08910;pseudo=true NZ_NPOH01000006.1 Protein Homology CDS 407 561 . - 0 ID=cds-CCO46_RS25445;Parent=gene-CCO46_RS25445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=CCO46_RS25445;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 644 1189 . + . ID=gene-CCO46_RS08915;Name=CCO46_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08915;old_locus_tag=CCO46_08915 NZ_NPOH01000006.1 Protein Homology CDS 644 1189 . + 0 ID=cds-WP_000617984.1;Parent=gene-CCO46_RS08915;Dbxref=GenBank:WP_000617984.1;Name=WP_000617984.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=CCO46_RS08915;product=chorismate mutase;protein_id=WP_000617984.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 1386 2024 . + . ID=gene-CCO46_RS08920;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=CCO46_RS08920;old_locus_tag=CCO46_08920 NZ_NPOH01000006.1 Protein Homology CDS 1386 2024 . + 0 ID=cds-WP_000457190.1;Parent=gene-CCO46_RS08920;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=CCO46_RS08920;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 2197 2559 . + . ID=gene-CCO46_RS08930;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=CCO46_RS08930;old_locus_tag=CCO46_08930 NZ_NPOH01000006.1 Protein Homology CDS 2197 2559 . + 0 ID=cds-WP_001248993.1;Parent=gene-CCO46_RS08930;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=CCO46_RS08930;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 2562 2744 . + . ID=gene-CCO46_RS08935;Name=CCO46_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08935;old_locus_tag=CCO46_08935 NZ_NPOH01000006.1 Protein Homology CDS 2562 2744 . + 0 ID=cds-WP_000513733.1;Parent=gene-CCO46_RS08935;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=CCO46_RS08935;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 2974 3615 . + . ID=gene-CCO46_RS08940;Name=CCO46_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08940;old_locus_tag=CCO46_08940 NZ_NPOH01000006.1 Protein Homology CDS 2974 3615 . + 0 ID=cds-WP_001669273.1;Parent=gene-CCO46_RS08940;Dbxref=GenBank:WP_001669273.1;Name=WP_001669273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=CCO46_RS08940;product=hypothetical protein;protein_id=WP_001669273.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 3929 4177 . + . ID=gene-CCO46_RS08950;Name=CCO46_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08950;old_locus_tag=CCO46_08950 NZ_NPOH01000006.1 Protein Homology CDS 3929 4177 . + 0 ID=cds-WP_000512149.1;Parent=gene-CCO46_RS08950;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=CCO46_RS08950;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 4316 4414 . - . ID=gene-CCO46_RS08955;Name=CCO46_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08955;old_locus_tag=CCO46_08955 NZ_NPOH01000006.1 Protein Homology CDS 4316 4414 . - 0 ID=cds-WP_001589065.1;Parent=gene-CCO46_RS08955;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=CCO46_RS08955;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 4610 4861 . + . ID=gene-CCO46_RS08960;Name=CCO46_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08960;old_locus_tag=CCO46_08960 NZ_NPOH01000006.1 Protein Homology CDS 4610 4861 . + 0 ID=cds-WP_000673492.1;Parent=gene-CCO46_RS08960;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=CCO46_RS08960;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 4930 5241 . + . ID=gene-CCO46_RS08965;Name=CCO46_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08965;old_locus_tag=CCO46_08965 NZ_NPOH01000006.1 Protein Homology CDS 4930 5241 . + 0 ID=cds-WP_097363306.1;Parent=gene-CCO46_RS08965;Dbxref=GenBank:WP_097363306.1;Name=WP_097363306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=CCO46_RS08965;product=hypothetical protein;protein_id=WP_097363306.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 5227 5574 . - . ID=gene-CCO46_RS08970;Name=CCO46_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08970;old_locus_tag=CCO46_08970 NZ_NPOH01000006.1 Protein Homology CDS 5227 5574 . - 0 ID=cds-WP_039517857.1;Parent=gene-CCO46_RS08970;Dbxref=GenBank:WP_039517857.1;Name=WP_039517857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=CCO46_RS08970;product=DUF488 domain-containing protein;protein_id=WP_039517857.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 5693 6877 . - . ID=gene-CCO46_RS08975;Name=CCO46_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08975;old_locus_tag=CCO46_08975 NZ_NPOH01000006.1 Protein Homology CDS 5693 6877 . - 0 ID=cds-WP_094887580.1;Parent=gene-CCO46_RS08975;Dbxref=GenBank:WP_094887580.1;Name=WP_094887580.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=CCO46_RS08975;product=CynX/NimT family MFS transporter;protein_id=WP_094887580.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 6978 7772 . + . ID=gene-CCO46_RS08980;Name=CCO46_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08980;old_locus_tag=CCO46_08980 NZ_NPOH01000006.1 Protein Homology CDS 6978 7772 . + 0 ID=cds-WP_000579798.1;Parent=gene-CCO46_RS08980;Dbxref=GenBank:WP_000579798.1;Name=WP_000579798.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=CCO46_RS08980;product=AraC family transcriptional regulator;protein_id=WP_000579798.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 7752 8198 . - . ID=gene-CCO46_RS08985;Name=CCO46_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08985;old_locus_tag=CCO46_08985 NZ_NPOH01000006.1 Protein Homology CDS 7752 8198 . - 0 ID=cds-WP_000460698.1;Parent=gene-CCO46_RS08985;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=CCO46_RS08985;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 8404 8511 . + . ID=gene-CCO46_RS08990;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=CCO46_RS08990;old_locus_tag=CCO46_08990 NZ_NPOH01000006.1 Protein Homology CDS 8404 8511 . + 0 ID=cds-WP_000272237.1;Parent=gene-CCO46_RS08990;Dbxref=GenBank:WP_000272237.1;Name=WP_000272237.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=CCO46_RS08990;product=small membrane protein YoaI;protein_id=WP_000272237.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 8508 9026 . - . ID=gene-CCO46_RS08995;Name=CCO46_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS08995;old_locus_tag=CCO46_08995 NZ_NPOH01000006.1 Protein Homology CDS 8508 9026 . - 0 ID=cds-WP_010989016.1;Parent=gene-CCO46_RS08995;Dbxref=GenBank:WP_010989016.1;Name=WP_010989016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=CCO46_RS08995;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_010989016.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 9076 10569 . - . ID=gene-CCO46_RS09000;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=CCO46_RS09000;old_locus_tag=CCO46_09000 NZ_NPOH01000006.1 Protein Homology CDS 9076 10569 . - 0 ID=cds-WP_080160020.1;Parent=gene-CCO46_RS09000;Dbxref=GenBank:WP_080160020.1;Name=WP_080160020.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=CCO46_RS09000;product=diguanylate cyclase DgcJ;protein_id=WP_080160020.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 10990 11208 . + . ID=gene-CCO46_RS09005;Name=CCO46_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09005;old_locus_tag=CCO46_09005 NZ_NPOH01000006.1 GeneMarkS-2+ CDS 10990 11208 . + 0 ID=cds-WP_139775315.1;Parent=gene-CCO46_RS09005;Dbxref=GenBank:WP_139775315.1;Name=WP_139775315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS09005;product=hypothetical protein;protein_id=WP_139775315.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 11360 12646 . - . ID=gene-CCO46_RS09010;Name=CCO46_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09010;old_locus_tag=CCO46_09010 NZ_NPOH01000006.1 Protein Homology CDS 11360 12646 . - 0 ID=cds-WP_094887579.1;Parent=gene-CCO46_RS09010;Dbxref=GenBank:WP_094887579.1;Name=WP_094887579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746804.1;locus_tag=CCO46_RS09010;product=YeaH/YhbH family protein;protein_id=WP_094887579.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 12769 14703 . - . ID=gene-CCO46_RS09015;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=CCO46_RS09015;old_locus_tag=CCO46_09015 NZ_NPOH01000006.1 Protein Homology CDS 12769 14703 . - 0 ID=cds-WP_094887603.1;Parent=gene-CCO46_RS09015;Dbxref=GenBank:WP_094887603.1;Name=WP_094887603.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=CCO46_RS09015;product=protein kinase YeaG;protein_id=WP_094887603.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 15129 15875 . + . ID=gene-CCO46_RS09020;Name=CCO46_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09020;old_locus_tag=CCO46_09020 NZ_NPOH01000006.1 Protein Homology CDS 15129 15875 . + 0 ID=cds-WP_080160021.1;Parent=gene-CCO46_RS09020;Dbxref=GenBank:WP_080160021.1;Name=WP_080160021.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=CCO46_RS09020;product=MipA/OmpV family protein;protein_id=WP_080160021.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 16165 17361 . + . ID=gene-CCO46_RS09025;Name=CCO46_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09025;old_locus_tag=CCO46_09025 NZ_NPOH01000006.1 Protein Homology CDS 16165 17361 . + 0 ID=cds-WP_000029242.1;Parent=gene-CCO46_RS09025;Dbxref=GenBank:WP_000029242.1;Name=WP_000029242.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=CCO46_RS09025;product=anaerobic sulfatase maturase;protein_id=WP_000029242.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 17458 18315 . + . ID=gene-CCO46_RS09030;Name=CCO46_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09030;old_locus_tag=CCO46_09030 NZ_NPOH01000006.1 Protein Homology CDS 17458 18315 . + 0 ID=cds-WP_076726427.1;Parent=gene-CCO46_RS09030;Dbxref=GenBank:WP_076726427.1;Name=WP_076726427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=CCO46_RS09030;product=aldo/keto reductase;protein_id=WP_076726427.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 18414 19298 . - . ID=gene-CCO46_RS09035;Name=CCO46_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09035;old_locus_tag=CCO46_09035 NZ_NPOH01000006.1 Protein Homology CDS 18414 19298 . - 0 ID=cds-WP_076726429.1;Parent=gene-CCO46_RS09035;Dbxref=GenBank:WP_076726429.1;Name=WP_076726429.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=CCO46_RS09035;product=D-hexose-6-phosphate mutarotase;protein_id=WP_076726429.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 19633 20628 . - . ID=gene-CCO46_RS09045;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=CCO46_RS09045;old_locus_tag=CCO46_09045 NZ_NPOH01000006.1 Protein Homology CDS 19633 20628 . - 0 ID=cds-WP_000153505.1;Parent=gene-CCO46_RS09045;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=CCO46_RS09045;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 20970 21383 . + . ID=gene-CCO46_RS09050;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CCO46_RS09050;old_locus_tag=CCO46_09050 NZ_NPOH01000006.1 Protein Homology CDS 20970 21383 . + 0 ID=cds-WP_001519539.1;Parent=gene-CCO46_RS09050;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=CCO46_RS09050;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 21425 21703 . + . ID=gene-CCO46_RS09055;Name=CCO46_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09055;old_locus_tag=CCO46_09055 NZ_NPOH01000006.1 Protein Homology CDS 21425 21703 . + 0 ID=cds-WP_001046864.1;Parent=gene-CCO46_RS09055;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=CCO46_RS09055;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11 NZ_NPOH01000006.1 RefSeq pseudogene 21806 22303 . - . ID=gene-CCO46_RS25450;Name=CCO46_RS25450;end_range=22303,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25450;partial=true;pseudo=true NZ_NPOH01000006.1 Protein Homology CDS 21806 22303 . - 0 ID=cds-CCO46_RS25450;Parent=gene-CCO46_RS25450;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975;end_range=22303,.;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884440.1;locus_tag=CCO46_RS25450;partial=true;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 22596 23672 . + . ID=gene-CCO46_RS09070;Name=CCO46_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09070;old_locus_tag=CCO46_09070 NZ_NPOH01000006.1 Protein Homology CDS 22596 23672 . + 0 ID=cds-WP_000645184.1;Parent=gene-CCO46_RS09070;Dbxref=GenBank:WP_000645184.1;Name=WP_000645184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=CCO46_RS09070;product=zinc-binding dehydrogenase;protein_id=WP_000645184.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 23699 25078 . + . ID=gene-CCO46_RS09075;Name=CCO46_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09075;old_locus_tag=CCO46_09075 NZ_NPOH01000006.1 Protein Homology CDS 23699 25078 . + 0 ID=cds-WP_000435317.1;Parent=gene-CCO46_RS09075;Dbxref=GenBank:WP_000435317.1;Name=WP_000435317.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=CCO46_RS09075;product=MFS transporter;protein_id=WP_000435317.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 25089 26132 . + . ID=gene-CCO46_RS09080;Name=CCO46_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09080;old_locus_tag=CCO46_09080 NZ_NPOH01000006.1 Protein Homology CDS 25089 26132 . + 0 ID=cds-WP_000798075.1;Parent=gene-CCO46_RS09080;Dbxref=GenBank:WP_000798075.1;Name=WP_000798075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=CCO46_RS09080;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_000798075.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 26154 26990 . + . ID=gene-CCO46_RS09085;Name=CCO46_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09085;old_locus_tag=CCO46_09085 NZ_NPOH01000006.1 Protein Homology CDS 26154 26990 . + 0 ID=cds-WP_000878870.1;Parent=gene-CCO46_RS09085;Dbxref=GenBank:WP_000878870.1;Name=WP_000878870.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=CCO46_RS09085;product=ketose-bisphosphate aldolase;protein_id=WP_000878870.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 26995 27942 . + . ID=gene-CCO46_RS09090;Name=CCO46_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09090;old_locus_tag=CCO46_09090 NZ_NPOH01000006.1 Protein Homology CDS 26995 27942 . + 0 ID=cds-WP_000343332.1;Parent=gene-CCO46_RS09090;Dbxref=GenBank:WP_000343332.1;Name=WP_000343332.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=CCO46_RS09090;product=sugar kinase;protein_id=WP_000343332.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 27952 28935 . + . ID=gene-CCO46_RS09095;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=CCO46_RS09095;old_locus_tag=CCO46_09095 NZ_NPOH01000006.1 Protein Homology CDS 27952 28935 . + 0 ID=cds-WP_000782142.1;Parent=gene-CCO46_RS09095;Dbxref=GenBank:WP_000782142.1;Name=WP_000782142.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=CCO46_RS09095;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000782142.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 29065 29823 . + . ID=gene-CCO46_RS09100;Name=CCO46_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09100;old_locus_tag=CCO46_09100 NZ_NPOH01000006.1 Protein Homology CDS 29065 29823 . + 0 ID=cds-WP_000719104.1;Parent=gene-CCO46_RS09100;Dbxref=GenBank:WP_000719104.1;Name=WP_000719104.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=CCO46_RS09100;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000719104.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 29959 31317 . + . ID=gene-CCO46_RS09105;Name=CCO46_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09105;old_locus_tag=CCO46_09105 NZ_NPOH01000006.1 Protein Homology CDS 29959 31317 . + 0 ID=cds-WP_000389923.1;Parent=gene-CCO46_RS09105;Dbxref=GenBank:WP_000389923.1;Name=WP_000389923.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389924.1;locus_tag=CCO46_RS09105;product=MFS transporter;protein_id=WP_000389923.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 31420 32076 . - . ID=gene-CCO46_RS09110;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=CCO46_RS09110;old_locus_tag=CCO46_09110 NZ_NPOH01000006.1 Protein Homology CDS 31420 32076 . - 0 ID=cds-WP_000184708.1;Parent=gene-CCO46_RS09110;Dbxref=GenBank:WP_000184708.1;Name=WP_000184708.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=CCO46_RS09110;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184708.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 32103 33119 . - . ID=gene-CCO46_RS09115;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=CCO46_RS09115;old_locus_tag=CCO46_09115 NZ_NPOH01000006.1 Protein Homology CDS 32103 33119 . - 0 ID=cds-WP_001170134.1;Parent=gene-CCO46_RS09115;Dbxref=GenBank:WP_001170134.1;Name=WP_001170134.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=CCO46_RS09115;product=asparaginase;protein_id=WP_001170134.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 33215 35071 . - . ID=gene-CCO46_RS09120;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CCO46_RS09120;old_locus_tag=CCO46_09120 NZ_NPOH01000006.1 Protein Homology CDS 33215 35071 . - 0 ID=cds-WP_001259884.1;Parent=gene-CCO46_RS09120;Dbxref=GenBank:WP_001259884.1;Name=WP_001259884.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=CCO46_RS09120;product=signal peptide peptidase SppA;protein_id=WP_001259884.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 35245 35796 . + . ID=gene-CCO46_RS09130;Name=CCO46_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09130;old_locus_tag=CCO46_09130 NZ_NPOH01000006.1 Protein Homology CDS 35245 35796 . + 0 ID=cds-WP_000339313.1;Parent=gene-CCO46_RS09130;Dbxref=GenBank:WP_000339313.1;Name=WP_000339313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=CCO46_RS09130;product=NAD(P)H nitroreductase;protein_id=WP_000339313.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 35914 36957 . + . ID=gene-CCO46_RS09140;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=CCO46_RS09140;old_locus_tag=CCO46_09140 NZ_NPOH01000006.1 Protein Homology CDS 35914 36957 . + 0 ID=cds-WP_001294888.1;Parent=gene-CCO46_RS09140;Dbxref=GenBank:WP_001294888.1;Name=WP_001294888.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=CCO46_RS09140;product=selenide%2C water dikinase SelD;protein_id=WP_001294888.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 36962 38911 . + . ID=gene-CCO46_RS09145;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=CCO46_RS09145;old_locus_tag=CCO46_09145 NZ_NPOH01000006.1 Protein Homology CDS 36962 38911 . + 0 ID=cds-WP_076726446.1;Parent=gene-CCO46_RS09145;Dbxref=GenBank:WP_076726446.1;Name=WP_076726446.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=CCO46_RS09145;product=DNA topoisomerase III;protein_id=WP_076726446.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 38941 40284 . - . ID=gene-CCO46_RS09150;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=CCO46_RS09150;old_locus_tag=CCO46_09150 NZ_NPOH01000006.1 Protein Homology CDS 38941 40284 . - 0 ID=cds-WP_000372865.1;Parent=gene-CCO46_RS09150;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=CCO46_RS09150;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 40523 40798 . + . ID=gene-CCO46_RS09155;Name=CCO46_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09155;old_locus_tag=CCO46_09155 NZ_NPOH01000006.1 Protein Homology CDS 40523 40798 . + 0 ID=cds-WP_000336847.1;Parent=gene-CCO46_RS09155;Dbxref=GenBank:WP_000336847.1;Name=WP_000336847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=CCO46_RS09155;product=YnjH family protein;protein_id=WP_000336847.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 40758 41174 . - . ID=gene-CCO46_RS09160;Name=CCO46_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09160;old_locus_tag=CCO46_09160 NZ_NPOH01000006.1 Protein Homology CDS 40758 41174 . - 0 ID=cds-WP_000592138.1;Parent=gene-CCO46_RS09160;Dbxref=GenBank:WP_000592138.1;Name=WP_000592138.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=CCO46_RS09160;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592138.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 41247 42053 . - . ID=gene-CCO46_RS09165;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=CCO46_RS09165;old_locus_tag=CCO46_09165 NZ_NPOH01000006.1 Protein Homology CDS 41247 42053 . - 0 ID=cds-WP_000673951.1;Parent=gene-CCO46_RS09165;Dbxref=GenBank:WP_000673951.1;Name=WP_000673951.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=CCO46_RS09165;product=exodeoxyribonuclease III;protein_id=WP_000673951.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 42499 43725 . + . ID=gene-CCO46_RS09175;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=CCO46_RS09175;old_locus_tag=CCO46_09175 NZ_NPOH01000006.1 Protein Homology CDS 42499 43725 . + 0 ID=cds-WP_001534648.1;Parent=gene-CCO46_RS09175;Dbxref=GenBank:WP_001534648.1;Name=WP_001534648.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=CCO46_RS09175;product=succinylornithine/acetylornithine transaminase;protein_id=WP_001534648.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 43716 44750 . + . ID=gene-CCO46_RS09180;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=CCO46_RS09180;old_locus_tag=CCO46_09180 NZ_NPOH01000006.1 Protein Homology CDS 43716 44750 . + 0 ID=cds-WP_001263889.1;Parent=gene-CCO46_RS09180;Dbxref=GenBank:WP_001263889.1;Name=WP_001263889.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=CCO46_RS09180;product=arginine N-succinyltransferase;protein_id=WP_001263889.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 44747 46225 . + . ID=gene-CCO46_RS09185;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=CCO46_RS09185;old_locus_tag=CCO46_09185 NZ_NPOH01000006.1 Protein Homology CDS 44747 46225 . + 0 ID=cds-WP_001534661.1;Parent=gene-CCO46_RS09185;Dbxref=GenBank:WP_001534661.1;Name=WP_001534661.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=CCO46_RS09185;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_001534661.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 46222 47565 . + . ID=gene-CCO46_RS09190;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=CCO46_RS09190;old_locus_tag=CCO46_09190 NZ_NPOH01000006.1 Protein Homology CDS 46222 47565 . + 0 ID=cds-WP_045900105.1;Parent=gene-CCO46_RS09190;Dbxref=GenBank:WP_045900105.1;Name=WP_045900105.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=CCO46_RS09190;product=N-succinylarginine dihydrolase;protein_id=WP_045900105.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 47558 48526 . + . ID=gene-CCO46_RS09195;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=CCO46_RS09195;old_locus_tag=CCO46_09195 NZ_NPOH01000006.1 Protein Homology CDS 47558 48526 . + 0 ID=cds-WP_097363307.1;Parent=gene-CCO46_RS09195;Dbxref=GenBank:WP_097363307.1;Name=WP_097363307.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=CCO46_RS09195;product=succinylglutamate desuccinylase;protein_id=WP_097363307.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 48862 49347 . + . ID=gene-CCO46_RS09205;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=CCO46_RS09205;old_locus_tag=CCO46_09205 NZ_NPOH01000006.1 Protein Homology CDS 48862 49347 . + 0 ID=cds-WP_001229001.1;Parent=gene-CCO46_RS09205;Dbxref=GenBank:WP_001229001.1;Name=WP_001229001.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=CCO46_RS09205;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001229001.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 49422 50303 . - . ID=gene-CCO46_RS09210;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=CCO46_RS09210;old_locus_tag=CCO46_09210 NZ_NPOH01000006.1 Protein Homology CDS 49422 50303 . - 0 ID=cds-WP_058331211.1;Parent=gene-CCO46_RS09210;Dbxref=GenBank:WP_058331211.1;Name=WP_058331211.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=CCO46_RS09210;product=excinuclease Cho;protein_id=WP_058331211.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 50424 51251 . - . ID=gene-CCO46_RS09215;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CCO46_RS09215;old_locus_tag=CCO46_09215 NZ_NPOH01000006.1 Protein Homology CDS 50424 51251 . - 0 ID=cds-WP_000174982.1;Parent=gene-CCO46_RS09215;Dbxref=GenBank:WP_000174982.1;Name=WP_000174982.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=CCO46_RS09215;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174982.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 51470 51811 . + . ID=gene-CCO46_RS09220;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=CCO46_RS09220;old_locus_tag=CCO46_09220 NZ_NPOH01000006.1 Protein Homology CDS 51470 51811 . + 0 ID=cds-WP_001039301.1;Parent=gene-CCO46_RS09220;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=CCO46_RS09220;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 52112 52432 . + . ID=gene-CCO46_RS09230;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=CCO46_RS09230;old_locus_tag=CCO46_09230 NZ_NPOH01000006.1 Protein Homology CDS 52112 52432 . + 0 ID=cds-WP_000412161.1;Parent=gene-CCO46_RS09230;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=CCO46_RS09230;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 52515 53873 . + . ID=gene-CCO46_RS09235;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=CCO46_RS09235;old_locus_tag=CCO46_09235 NZ_NPOH01000006.1 Protein Homology CDS 52515 53873 . + 0 ID=cds-WP_000073063.1;Parent=gene-CCO46_RS09235;Dbxref=GenBank:WP_000073063.1;Name=WP_000073063.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=CCO46_RS09235;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073063.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 53924 54271 . + . ID=gene-CCO46_RS09240;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=CCO46_RS09240;old_locus_tag=CCO46_09240 NZ_NPOH01000006.1 Protein Homology CDS 53924 54271 . + 0 ID=cds-WP_000459883.1;Parent=gene-CCO46_RS09240;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=CCO46_RS09240;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 54282 55124 . + . ID=gene-CCO46_RS09245;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=CCO46_RS09245;old_locus_tag=CCO46_09245 NZ_NPOH01000006.1 Protein Homology CDS 54282 55124 . + 0 ID=cds-WP_000983393.1;Parent=gene-CCO46_RS09245;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=CCO46_RS09245;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 55249 56604 . + . ID=gene-CCO46_RS09250;Name=CCO46_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09250;old_locus_tag=CCO46_09250 NZ_NPOH01000006.1 Protein Homology CDS 55249 56604 . + 0 ID=cds-WP_079963819.1;Parent=gene-CCO46_RS09250;Dbxref=GenBank:WP_079963819.1;Name=WP_079963819.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=CCO46_RS09250;product=6-phospho-beta-glucosidase;protein_id=WP_079963819.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 56617 57375 . + . ID=gene-CCO46_RS09255;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=CCO46_RS09255;old_locus_tag=CCO46_09255 NZ_NPOH01000006.1 Protein Homology CDS 56617 57375 . + 0 ID=cds-WP_080197966.1;Parent=gene-CCO46_RS09255;Dbxref=GenBank:WP_080197966.1;Name=WP_080197966.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=CCO46_RS09255;product=chitin disaccharide deacetylase;protein_id=WP_080197966.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 57419 59671 . - . ID=gene-CCO46_RS09260;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=CCO46_RS09260;old_locus_tag=CCO46_09260 NZ_NPOH01000006.1 Protein Homology CDS 57419 59671 . - 0 ID=cds-WP_097363308.1;Parent=gene-CCO46_RS09260;Dbxref=GenBank:WP_097363308.1;Name=WP_097363308.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=CCO46_RS09260;product=catalase HPII;protein_id=WP_097363308.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 59888 60130 . + . ID=gene-CCO46_RS09265;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=CCO46_RS09265;old_locus_tag=CCO46_09265 NZ_NPOH01000006.1 Protein Homology CDS 59888 60130 . + 0 ID=cds-WP_000977510.1;Parent=gene-CCO46_RS09265;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=CCO46_RS09265;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 60233 61624 . - . ID=gene-CCO46_RS09270;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=CCO46_RS09270;old_locus_tag=CCO46_09270 NZ_NPOH01000006.1 Protein Homology CDS 60233 61624 . - 0 ID=cds-WP_001010654.1;Parent=gene-CCO46_RS09270;Dbxref=GenBank:WP_001010654.1;Name=WP_001010654.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=CCO46_RS09270;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010654.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 61761 62360 . - . ID=gene-CCO46_RS09275;Name=CCO46_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09275;old_locus_tag=CCO46_09275 NZ_NPOH01000006.1 Protein Homology CDS 61761 62360 . - 0 ID=cds-WP_000505804.1;Parent=gene-CCO46_RS09275;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=CCO46_RS09275;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 62498 63166 . - . ID=gene-CCO46_RS09280;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=CCO46_RS09280;old_locus_tag=CCO46_09280 NZ_NPOH01000006.1 Protein Homology CDS 62498 63166 . - 0 ID=cds-WP_000106854.1;Parent=gene-CCO46_RS09280;Dbxref=GenBank:WP_000106854.1;Name=WP_000106854.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=CCO46_RS09280;product=hexitol phosphatase HxpB;protein_id=WP_000106854.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 63315 63851 . + . ID=gene-CCO46_RS09285;Name=CCO46_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09285;old_locus_tag=CCO46_09285 NZ_NPOH01000006.1 Protein Homology CDS 63315 63851 . + 0 ID=cds-WP_080160033.1;Parent=gene-CCO46_RS09285;Dbxref=GenBank:WP_080160033.1;Name=WP_080160033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=CCO46_RS09285;product=YniB family protein;protein_id=WP_080160033.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 63894 64754 . - . ID=gene-CCO46_RS09290;Name=CCO46_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09290;old_locus_tag=CCO46_09290 NZ_NPOH01000006.1 Protein Homology CDS 63894 64754 . - 0 ID=cds-WP_000267686.1;Parent=gene-CCO46_RS09290;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=CCO46_RS09290;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 64861 65151 . - . ID=gene-CCO46_RS09295;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=CCO46_RS09295;old_locus_tag=CCO46_09295 NZ_NPOH01000006.1 Protein Homology CDS 64861 65151 . - 0 ID=cds-WP_000146129.1;Parent=gene-CCO46_RS09295;Dbxref=GenBank:WP_000146129.1;Name=WP_000146129.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=CCO46_RS09295;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146129.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 65248 66180 . - . ID=gene-CCO46_RS09300;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO46_RS09300;old_locus_tag=CCO46_09300 NZ_NPOH01000006.1 Protein Homology CDS 65248 66180 . - 0 ID=cds-WP_000251697.1;Parent=gene-CCO46_RS09300;Dbxref=GenBank:WP_000251697.1;Name=WP_000251697.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=CCO46_RS09300;product=6-phosphofructokinase II;protein_id=WP_000251697.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 66469 67227 . + . ID=gene-CCO46_RS09305;Name=CCO46_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09305;old_locus_tag=CCO46_09305 NZ_NPOH01000006.1 Protein Homology CDS 66469 67227 . + 0 ID=cds-WP_000770981.1;Parent=gene-CCO46_RS09305;Dbxref=GenBank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=CCO46_RS09305;product=DUF481 domain-containing protein;protein_id=WP_000770981.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 67276 68235 . - . ID=gene-CCO46_RS09310;Name=CCO46_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09310;old_locus_tag=CCO46_09310 NZ_NPOH01000006.1 Protein Homology CDS 67276 68235 . - 0 ID=cds-WP_001046434.1;Parent=gene-CCO46_RS09310;Dbxref=GenBank:WP_001046434.1;Name=WP_001046434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=CCO46_RS09310;product=lipid A deacylase LpxR family protein;protein_id=WP_001046434.1;transl_table=11 NZ_NPOH01000006.1 RefSeq pseudogene 68378 68692 . + . ID=gene-CCO46_RS09315;Name=CCO46_RS09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS09315;old_locus_tag=CCO46_09315;pseudo=true NZ_NPOH01000006.1 Protein Homology CDS 68378 68692 . + 0 ID=cds-CCO46_RS09315;Parent=gene-CCO46_RS09315;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=CCO46_RS09315;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 68689 69543 . + . ID=gene-CCO46_RS09320;Name=CCO46_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09320;old_locus_tag=CCO46_09320 NZ_NPOH01000006.1 Protein Homology CDS 68689 69543 . + 0 ID=cds-WP_080197969.1;Parent=gene-CCO46_RS09320;Dbxref=GenBank:WP_080197969.1;Name=WP_080197969.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=CCO46_RS09320;product=DNA/RNA non-specific endonuclease;protein_id=WP_080197969.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 69803 71731 . + . ID=gene-CCO46_RS09330;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CCO46_RS09330;old_locus_tag=CCO46_09330 NZ_NPOH01000006.1 Protein Homology CDS 69803 71731 . + 0 ID=cds-WP_001144226.1;Parent=gene-CCO46_RS09330;Dbxref=GenBank:WP_001144226.1;Name=WP_001144226.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=CCO46_RS09330;product=threonine--tRNA ligase;protein_id=WP_001144226.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 71735 72277 . + . ID=gene-CCO46_RS09335;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CCO46_RS09335;old_locus_tag=CCO46_09335 NZ_NPOH01000006.1 Protein Homology CDS 71735 72277 . + 0 ID=cds-WP_001574431.1;Parent=gene-CCO46_RS09335;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=CCO46_RS09335;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 72373 72570 . + . ID=gene-CCO46_RS09340;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CCO46_RS09340;old_locus_tag=CCO46_09340 NZ_NPOH01000006.1 Protein Homology CDS 72373 72570 . + 0 ID=cds-WP_001124225.1;Parent=gene-CCO46_RS09340;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=CCO46_RS09340;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 72621 72977 . + . ID=gene-CCO46_RS09345;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CCO46_RS09345;old_locus_tag=CCO46_09345 NZ_NPOH01000006.1 Protein Homology CDS 72621 72977 . + 0 ID=cds-WP_000124850.1;Parent=gene-CCO46_RS09345;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=CCO46_RS09345;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_NPOH01000006.1 cmsearch sequence_feature 73093 73216 . + . ID=id-NZ_NPOH01000006.1:73093..73216;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPOH01000006.1 RefSeq gene 73098 73142 . + . ID=gene-CCO46_RS24915;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=CCO46_RS24915 NZ_NPOH01000006.1 Protein Homology CDS 73098 73142 . + 0 ID=cds-WP_001386830.1;Parent=gene-CCO46_RS24915;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=CCO46_RS24915;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 73279 74262 . + . ID=gene-CCO46_RS09350;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CCO46_RS09350;old_locus_tag=CCO46_09350 NZ_NPOH01000006.1 Protein Homology CDS 73279 74262 . + 0 ID=cds-WP_000018570.1;Parent=gene-CCO46_RS09350;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=CCO46_RS09350;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 74278 76665 . + . ID=gene-CCO46_RS09355;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CCO46_RS09355;old_locus_tag=CCO46_09355 NZ_NPOH01000006.1 Protein Homology CDS 74278 76665 . + 0 ID=cds-WP_097363310.1;Parent=gene-CCO46_RS09355;Dbxref=GenBank:WP_097363310.1;Name=WP_097363310.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=CCO46_RS09355;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_097363310.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 76670 76969 . + . ID=gene-CCO46_RS09360;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=CCO46_RS09360;old_locus_tag=CCO46_09360 NZ_NPOH01000006.1 Protein Homology CDS 76670 76969 . + 0 ID=cds-WP_001229266.1;Parent=gene-CCO46_RS09360;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=CCO46_RS09360;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 77172 78152 . + . ID=gene-CCO46_RS09365;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=CCO46_RS09365;old_locus_tag=CCO46_09365 NZ_NPOH01000006.1 Protein Homology CDS 77172 78152 . + 0 ID=cds-WP_000954984.1;Parent=gene-CCO46_RS09365;Dbxref=GenBank:WP_000954984.1;Name=WP_000954984.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=CCO46_RS09365;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954984.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 78244 78795 . + . ID=gene-CCO46_RS09370;Name=CCO46_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09370;old_locus_tag=CCO46_09370 NZ_NPOH01000006.1 Protein Homology CDS 78244 78795 . + 0 ID=cds-WP_001181565.1;Parent=gene-CCO46_RS09370;Dbxref=GenBank:WP_001181565.1;Name=WP_001181565.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=CCO46_RS09370;product=glutathione peroxidase;protein_id=WP_001181565.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 78795 79544 . + . ID=gene-CCO46_RS09375;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=CCO46_RS09375;old_locus_tag=CCO46_09375 NZ_NPOH01000006.1 Protein Homology CDS 78795 79544 . + 0 ID=cds-WP_000080607.1;Parent=gene-CCO46_RS09375;Dbxref=GenBank:WP_000080607.1;Name=WP_000080607.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=CCO46_RS09375;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000080607.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 79621 80085 . + . ID=gene-CCO46_RS09380;Name=CCO46_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09380;old_locus_tag=CCO46_09380 NZ_NPOH01000006.1 Protein Homology CDS 79621 80085 . + 0 ID=cds-WP_001213258.1;Parent=gene-CCO46_RS09380;Dbxref=GenBank:WP_001213258.1;Name=WP_001213258.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=CCO46_RS09380;product=C40 family peptidase;protein_id=WP_001213258.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 80399 81112 . + . ID=gene-CCO46_RS09385;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=CCO46_RS09385;old_locus_tag=CCO46_09385 NZ_NPOH01000006.1 Protein Homology CDS 80399 81112 . + 0 ID=cds-WP_097363311.1;Parent=gene-CCO46_RS09385;Dbxref=GenBank:WP_097363311.1;Name=WP_097363311.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=CCO46_RS09385;product=anti-FlhDC factor YdiV;protein_id=WP_097363311.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 81174 82616 . + . ID=gene-CCO46_RS09390;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=CCO46_RS09390;old_locus_tag=CCO46_09390 NZ_NPOH01000006.1 Protein Homology CDS 81174 82616 . + 0 ID=cds-WP_000175660.1;Parent=gene-CCO46_RS09390;Dbxref=GenBank:WP_000175660.1;Name=WP_000175660.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=CCO46_RS09390;product=protein adenylyltransferase SelO;protein_id=WP_000175660.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 82651 82842 . - . ID=gene-CCO46_RS09395;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=CCO46_RS09395;old_locus_tag=CCO46_09395 NZ_NPOH01000006.1 Protein Homology CDS 82651 82842 . - 0 ID=cds-WP_000089115.1;Parent=gene-CCO46_RS09395;Dbxref=GenBank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=CCO46_RS09395;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 82999 84045 . - . ID=gene-CCO46_RS09400;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=CCO46_RS09400;old_locus_tag=CCO46_09400 NZ_NPOH01000006.1 Protein Homology CDS 82999 84045 . - 0 ID=cds-WP_001082196.1;Parent=gene-CCO46_RS09400;Dbxref=GenBank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=CCO46_RS09400;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 84201 85034 . - . ID=gene-CCO46_RS09405;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=CCO46_RS09405;old_locus_tag=CCO46_09405 NZ_NPOH01000006.1 Protein Homology CDS 84201 85034 . - 0 ID=cds-WP_000370992.1;Parent=gene-CCO46_RS09405;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=CCO46_RS09405;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 85371 87749 . + . ID=gene-CCO46_RS09410;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=CCO46_RS09410;old_locus_tag=CCO46_09410 NZ_NPOH01000006.1 Protein Homology CDS 85371 87749 . + 0 ID=cds-WP_080160034.1;Parent=gene-CCO46_RS09410;Dbxref=GenBank:WP_080160034.1;Name=WP_080160034.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=CCO46_RS09410;product=phosphoenolpyruvate synthase;protein_id=WP_080160034.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 87791 89431 . - . ID=gene-CCO46_RS09415;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=CCO46_RS09415;old_locus_tag=CCO46_09415 NZ_NPOH01000006.1 Protein Homology CDS 87791 89431 . - 0 ID=cds-WP_000117490.1;Parent=gene-CCO46_RS09415;Dbxref=GenBank:WP_000117490.1;Name=WP_000117490.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=CCO46_RS09415;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_000117490.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 89520 89813 . - . ID=gene-CCO46_RS09420;Name=CCO46_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09420;old_locus_tag=CCO46_09420 NZ_NPOH01000006.1 Protein Homology CDS 89520 89813 . - 0 ID=cds-WP_000093362.1;Parent=gene-CCO46_RS09420;Dbxref=GenBank:WP_000093362.1;Name=WP_000093362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=CCO46_RS09420;product=ferredoxin family protein;protein_id=WP_000093362.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 89810 91096 . - . ID=gene-CCO46_RS09425;Name=CCO46_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09425;old_locus_tag=CCO46_09425 NZ_NPOH01000006.1 Protein Homology CDS 89810 91096 . - 0 ID=cds-WP_001278555.1;Parent=gene-CCO46_RS09425;Dbxref=GenBank:WP_001278555.1;Name=WP_001278555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=CCO46_RS09425;product=FAD-dependent oxidoreductase;protein_id=WP_001278555.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 91153 92088 . - . ID=gene-CCO46_RS09430;Name=CCO46_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09430;old_locus_tag=CCO46_09430 NZ_NPOH01000006.1 Protein Homology CDS 91153 92088 . - 0 ID=cds-WP_001015880.1;Parent=gene-CCO46_RS09430;Dbxref=GenBank:WP_001015880.1;Name=WP_001015880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=CCO46_RS09430;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015880.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 92110 92874 . - . ID=gene-CCO46_RS09435;Name=CCO46_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09435;old_locus_tag=CCO46_09435 NZ_NPOH01000006.1 Protein Homology CDS 92110 92874 . - 0 ID=cds-WP_024798030.1;Parent=gene-CCO46_RS09435;Dbxref=GenBank:WP_024798030.1;Name=WP_024798030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=CCO46_RS09435;product=electron transfer flavoprotein;protein_id=WP_024798030.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 93337 94227 . + . ID=gene-CCO46_RS09440;Name=CCO46_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09440;old_locus_tag=CCO46_09440 NZ_NPOH01000006.1 Protein Homology CDS 93337 94227 . + 0 ID=cds-WP_000284832.1;Parent=gene-CCO46_RS09440;Dbxref=GenBank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=CCO46_RS09440;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 94303 95454 . - . ID=gene-CCO46_RS09445;Name=CCO46_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09445;old_locus_tag=CCO46_09445 NZ_NPOH01000006.1 Protein Homology CDS 94303 95454 . - 0 ID=cds-WP_000347819.1;Parent=gene-CCO46_RS09445;Dbxref=GenBank:WP_000347819.1;Name=WP_000347819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=CCO46_RS09445;product=acyl-CoA dehydrogenase;protein_id=WP_000347819.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 95468 97063 . - . ID=gene-CCO46_RS09450;Name=CCO46_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09450;old_locus_tag=CCO46_09450 NZ_NPOH01000006.1 Protein Homology CDS 95468 97063 . - 0 ID=cds-WP_000700599.1;Parent=gene-CCO46_RS09450;Dbxref=GenBank:WP_000700599.1;Name=WP_000700599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=CCO46_RS09450;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000700599.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 97217 97975 . - . ID=gene-CCO46_RS09455;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CCO46_RS09455;old_locus_tag=CCO46_09455 NZ_NPOH01000006.1 Protein Homology CDS 97217 97975 . - 0 ID=cds-WP_097363312.1;Parent=gene-CCO46_RS09455;Dbxref=GenBank:WP_097363312.1;Name=WP_097363312.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=CCO46_RS09455;product=type I 3-dehydroquinate dehydratase;protein_id=WP_097363312.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 98020 98886 . - . ID=gene-CCO46_RS09460;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=CCO46_RS09460;old_locus_tag=CCO46_09460 NZ_NPOH01000006.1 Protein Homology CDS 98020 98886 . - 0 ID=cds-WP_000383488.1;Parent=gene-CCO46_RS09460;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=CCO46_RS09460;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 98953 100188 . - . ID=gene-CCO46_RS09465;Name=CCO46_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09465;old_locus_tag=CCO46_09465 NZ_NPOH01000006.1 Protein Homology CDS 98953 100188 . - 0 ID=cds-WP_000081211.1;Parent=gene-CCO46_RS09465;Dbxref=GenBank:WP_000081211.1;Name=WP_000081211.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=CCO46_RS09465;product=MFS transporter;protein_id=WP_000081211.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 100552 101763 . - . ID=gene-CCO46_RS09470;Name=CCO46_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09470;old_locus_tag=CCO46_09470 NZ_NPOH01000006.1 Protein Homology CDS 100552 101763 . - 0 ID=cds-WP_058331546.1;Parent=gene-CCO46_RS09470;Dbxref=GenBank:WP_058331546.1;Name=WP_058331546.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=CCO46_RS09470;product=MFS transporter;protein_id=WP_058331546.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 101904 102263 . - . ID=gene-CCO46_RS09475;Name=CCO46_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09475;old_locus_tag=CCO46_09475 NZ_NPOH01000006.1 Protein Homology CDS 101904 102263 . - 0 ID=cds-WP_000980451.1;Parent=gene-CCO46_RS09475;Dbxref=GenBank:WP_000980451.1;Name=WP_000980451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=CCO46_RS09475;product=YdiL family protein;protein_id=WP_000980451.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 102431 102538 . - . ID=gene-CCO46_RS09480;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=CCO46_RS09480;old_locus_tag=CCO46_09480 NZ_NPOH01000006.1 cmsearch antisense_RNA 102431 102538 . - . ID=rna-CCO46_RS09480;Parent=gene-CCO46_RS09480;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS09480;product=antisense sRNA RprA NZ_NPOH01000006.1 cmsearch exon 102431 102538 . - . ID=exon-CCO46_RS09480-1;Parent=rna-CCO46_RS09480;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS09480;product=antisense sRNA RprA NZ_NPOH01000006.1 RefSeq gene 102721 103839 . - . ID=gene-CCO46_RS09485;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=CCO46_RS09485;old_locus_tag=CCO46_09485 NZ_NPOH01000006.1 Protein Homology CDS 102721 103839 . - 0 ID=cds-WP_000248613.1;Parent=gene-CCO46_RS09485;Dbxref=GenBank:WP_000248613.1;Name=WP_000248613.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=CCO46_RS09485;product=AI-2E family transporter YdiK;protein_id=WP_000248613.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 104104 107160 . + . ID=gene-CCO46_RS09490;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=CCO46_RS09490;old_locus_tag=CCO46_09490 NZ_NPOH01000006.1 Protein Homology CDS 104104 107160 . + 0 ID=cds-WP_058331545.1;Parent=gene-CCO46_RS09490;Dbxref=GenBank:WP_058331545.1;Name=WP_058331545.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=CCO46_RS09490;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_058331545.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 107157 107567 . + . ID=gene-CCO46_RS09495;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CCO46_RS09495;old_locus_tag=CCO46_09495 NZ_NPOH01000006.1 Protein Homology CDS 107157 107567 . + 0 ID=cds-WP_000637926.1;Parent=gene-CCO46_RS09495;Dbxref=GenBank:WP_000637926.1;Name=WP_000637926.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=CCO46_RS09495;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637926.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 107666 107854 . + . ID=gene-CCO46_RS09500;Name=CCO46_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09500;old_locus_tag=CCO46_09500 NZ_NPOH01000006.1 Protein Homology CDS 107666 107854 . + 0 ID=cds-WP_001537749.1;Parent=gene-CCO46_RS09500;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=CCO46_RS09500;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 108142 109488 . - . ID=gene-CCO46_RS09505;Name=CCO46_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09505;old_locus_tag=CCO46_09505 NZ_NPOH01000006.1 Protein Homology CDS 108142 109488 . - 0 ID=cds-WP_000261861.1;Parent=gene-CCO46_RS09505;Dbxref=GenBank:WP_000261861.1;Name=WP_000261861.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=CCO46_RS09505;product=L-cystine transporter;protein_id=WP_000261861.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 109915 110283 . + . ID=gene-CCO46_RS09510;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=CCO46_RS09510;old_locus_tag=CCO46_09510 NZ_NPOH01000006.1 Protein Homology CDS 109915 110283 . + 0 ID=cds-WP_000418973.1;Parent=gene-CCO46_RS09510;Dbxref=GenBank:WP_000418973.1;Name=WP_000418973.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=CCO46_RS09510;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418973.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 110292 111779 . + . ID=gene-CCO46_RS09515;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CCO46_RS09515;old_locus_tag=CCO46_09515 NZ_NPOH01000006.1 Protein Homology CDS 110292 111779 . + 0 ID=cds-WP_000089375.1;Parent=gene-CCO46_RS09515;Dbxref=GenBank:WP_000089375.1;Name=WP_000089375.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=CCO46_RS09515;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089375.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 111796 112542 . + . ID=gene-CCO46_RS09520;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CCO46_RS09520;old_locus_tag=CCO46_09520 NZ_NPOH01000006.1 Protein Homology CDS 111796 112542 . + 0 ID=cds-WP_000948902.1;Parent=gene-CCO46_RS09520;Dbxref=GenBank:WP_000948902.1;Name=WP_000948902.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=CCO46_RS09520;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948902.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 112517 113788 . + . ID=gene-CCO46_RS09525;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CCO46_RS09525;old_locus_tag=CCO46_09525 NZ_NPOH01000006.1 Protein Homology CDS 112517 113788 . + 0 ID=cds-WP_094964369.1;Parent=gene-CCO46_RS09525;Dbxref=GenBank:WP_094964369.1;Name=WP_094964369.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=CCO46_RS09525;product=Fe-S cluster assembly protein SufD;protein_id=WP_094964369.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 113785 115005 . + . ID=gene-CCO46_RS09530;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=CCO46_RS09530;old_locus_tag=CCO46_09530 NZ_NPOH01000006.1 Protein Homology CDS 113785 115005 . + 0 ID=cds-WP_094964370.1;Parent=gene-CCO46_RS09530;Dbxref=GenBank:WP_094964370.1;Name=WP_094964370.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=CCO46_RS09530;product=cysteine desulfurase SufS;protein_id=WP_094964370.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 115018 115434 . + . ID=gene-CCO46_RS09535;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=CCO46_RS09535;old_locus_tag=CCO46_09535 NZ_NPOH01000006.1 Protein Homology CDS 115018 115434 . + 0 ID=cds-WP_000729470.1;Parent=gene-CCO46_RS09535;Dbxref=GenBank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=CCO46_RS09535;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 115589 116590 . + . ID=gene-CCO46_RS09540;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=CCO46_RS09540;old_locus_tag=CCO46_09540 NZ_NPOH01000006.1 Protein Homology CDS 115589 116590 . + 0 ID=cds-WP_061424953.1;Parent=gene-CCO46_RS09540;Dbxref=GenBank:WP_061424953.1;Name=WP_061424953.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=CCO46_RS09540;product=L%2CD-transpeptidase LdtE;protein_id=WP_061424953.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 116657 116896 . - . ID=gene-CCO46_RS09545;Name=CCO46_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09545;old_locus_tag=CCO46_09545 NZ_NPOH01000006.1 Protein Homology CDS 116657 116896 . - 0 ID=cds-WP_023216619.1;Parent=gene-CCO46_RS09545;Dbxref=GenBank:WP_023216619.1;Name=WP_023216619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=CCO46_RS09545;product=major outer membrane lipoprotein;protein_id=WP_023216619.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 116979 117215 . - . ID=gene-CCO46_RS09550;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=CCO46_RS09550;old_locus_tag=CCO46_09550 NZ_NPOH01000006.1 Protein Homology CDS 116979 117215 . - 0 ID=cds-WP_001082307.1;Parent=gene-CCO46_RS09550;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=CCO46_RS09550;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 117526 118938 . - . ID=gene-CCO46_RS09555;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=CCO46_RS09555;old_locus_tag=CCO46_09555 NZ_NPOH01000006.1 Protein Homology CDS 117526 118938 . - 0 ID=cds-WP_000751447.1;Parent=gene-CCO46_RS09555;Dbxref=GenBank:WP_000751447.1;Name=WP_000751447.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=CCO46_RS09555;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 118946 119176 . - . ID=gene-CCO46_RS25830;Name=CCO46_RS25830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25830 NZ_NPOH01000006.1 Protein Homology CDS 118946 119176 . - 0 ID=cds-WP_418143684.1;Parent=gene-CCO46_RS25830;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=CCO46_RS25830;product=hypothetical protein;protein_id=WP_418143684.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 119340 120683 . - . ID=gene-CCO46_RS09565;Name=CCO46_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09565;old_locus_tag=CCO46_09565 NZ_NPOH01000006.1 Protein Homology CDS 119340 120683 . - 0 ID=cds-WP_097363314.1;Parent=gene-CCO46_RS09565;Dbxref=GenBank:WP_097363314.1;Name=WP_097363314.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=CCO46_RS09565;product=APC family permease;protein_id=WP_097363314.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 120705 121598 . - . ID=gene-CCO46_RS09570;Name=CCO46_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09570;old_locus_tag=CCO46_09570 NZ_NPOH01000006.1 Protein Homology CDS 120705 121598 . - 0 ID=cds-WP_058331542.1;Parent=gene-CCO46_RS09570;Dbxref=GenBank:WP_058331542.1;Name=WP_058331542.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=CCO46_RS09570;product=proline iminopeptidase-family hydrolase;protein_id=WP_058331542.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 121657 122394 . - . ID=gene-CCO46_RS09575;Name=CCO46_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09575;old_locus_tag=CCO46_09575 NZ_NPOH01000006.1 Protein Homology CDS 121657 122394 . - 0 ID=cds-WP_058331541.1;Parent=gene-CCO46_RS09575;Dbxref=GenBank:WP_058331541.1;Name=WP_058331541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=CCO46_RS09575;product=glutamine amidotransferase;protein_id=WP_058331541.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 122406 123632 . - . ID=gene-CCO46_RS09580;Name=CCO46_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09580;old_locus_tag=CCO46_09580 NZ_NPOH01000006.1 Protein Homology CDS 122406 123632 . - 0 ID=cds-WP_000471822.1;Parent=gene-CCO46_RS09580;Dbxref=GenBank:WP_000471822.1;Name=WP_000471822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=CCO46_RS09580;product=PfkB family carbohydrate kinase;protein_id=WP_000471822.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 123955 127017 . - . ID=gene-CCO46_RS09585;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=CCO46_RS09585;old_locus_tag=CCO46_09585 NZ_NPOH01000006.1 Protein Homology CDS 123955 127017 . - 0 ID=cds-WP_094887569.1;Parent=gene-CCO46_RS09585;Dbxref=GenBank:WP_094887569.1;Name=WP_094887569.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=CCO46_RS09585;product=tetrathionate reductase subunit TtrA;protein_id=WP_094887569.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 127010 128032 . - . ID=gene-CCO46_RS09590;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=CCO46_RS09590;old_locus_tag=CCO46_09590 NZ_NPOH01000006.1 Protein Homology CDS 127010 128032 . - 0 ID=cds-WP_023202089.1;Parent=gene-CCO46_RS09590;Dbxref=GenBank:WP_023202089.1;Name=WP_023202089.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=CCO46_RS09590;product=tetrathionate reductase subunit TtrC;protein_id=WP_023202089.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 128033 128767 . - . ID=gene-CCO46_RS09595;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=CCO46_RS09595;old_locus_tag=CCO46_09595 NZ_NPOH01000006.1 Protein Homology CDS 128033 128767 . - 0 ID=cds-WP_001527654.1;Parent=gene-CCO46_RS09595;Dbxref=GenBank:WP_001527654.1;Name=WP_001527654.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=CCO46_RS09595;product=tetrathionate reductase subunit TtrB;protein_id=WP_001527654.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 128949 130727 . + . ID=gene-CCO46_RS09600;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=CCO46_RS09600;old_locus_tag=CCO46_09600 NZ_NPOH01000006.1 Protein Homology CDS 128949 130727 . + 0 ID=cds-WP_097363315.1;Parent=gene-CCO46_RS09600;Dbxref=GenBank:WP_097363315.1;Name=WP_097363315.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=CCO46_RS09600;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_097363315.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 130702 131322 . + . ID=gene-CCO46_RS09605;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=CCO46_RS09605;old_locus_tag=CCO46_09605 NZ_NPOH01000006.1 Protein Homology CDS 130702 131322 . + 0 ID=cds-WP_000190927.1;Parent=gene-CCO46_RS09605;Dbxref=GenBank:WP_000190927.1;Name=WP_000190927.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=CCO46_RS09605;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190927.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 131420 131632 . + . ID=gene-CCO46_RS09610;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=CCO46_RS09610;old_locus_tag=CCO46_09610 NZ_NPOH01000006.1 Protein Homology CDS 131420 131632 . + 0 ID=cds-WP_000165779.1;Parent=gene-CCO46_RS09610;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=CCO46_RS09610;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 131742 132701 . - . ID=gene-CCO46_RS09615;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=CCO46_RS09615;old_locus_tag=CCO46_09615 NZ_NPOH01000006.1 Protein Homology CDS 131742 132701 . - 0 ID=cds-WP_080160041.1;Parent=gene-CCO46_RS09615;Dbxref=GenBank:WP_080160041.1;Name=WP_080160041.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060725.1;locus_tag=CCO46_RS09615;product=transcriptional regulator MlrB;protein_id=WP_080160041.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 132873 133601 . - . ID=gene-CCO46_RS09620;Name=CCO46_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09620;old_locus_tag=CCO46_09620 NZ_NPOH01000006.1 Protein Homology CDS 132873 133601 . - 0 ID=cds-WP_000122321.1;Parent=gene-CCO46_RS09620;Dbxref=GenBank:WP_000122321.1;Name=WP_000122321.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=CCO46_RS09620;product=MerR family transcriptional regulator;protein_id=WP_000122321.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 133780 134418 . - . ID=gene-CCO46_RS09625;Name=CCO46_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09625;old_locus_tag=CCO46_09625 NZ_NPOH01000006.1 Protein Homology CDS 133780 134418 . - 0 ID=cds-WP_000666335.1;Parent=gene-CCO46_RS09625;Dbxref=GenBank:WP_000666335.1;Name=WP_000666335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=CCO46_RS09625;product=two component system response regulator;protein_id=WP_000666335.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 134449 137211 . - . ID=gene-CCO46_RS09630;Name=CCO46_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09630;old_locus_tag=CCO46_09630 NZ_NPOH01000006.1 Protein Homology CDS 134449 137211 . - 0 ID=cds-WP_076726485.1;Parent=gene-CCO46_RS09630;Dbxref=GenBank:WP_076726485.1;Name=WP_076726485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=CCO46_RS09630;product=two component system sensor kinase;protein_id=WP_076726485.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 137612 138013 . + . ID=gene-CCO46_RS09635;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=CCO46_RS09635;old_locus_tag=CCO46_09635 NZ_NPOH01000006.1 Protein Homology CDS 137612 138013 . + 0 ID=cds-WP_078057657.1;Parent=gene-CCO46_RS09635;Dbxref=GenBank:WP_078057657.1;Name=WP_078057657.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=CCO46_RS09635;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_078057657.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 138015 139508 . + . ID=gene-CCO46_RS09640;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=CCO46_RS09640;old_locus_tag=CCO46_09640 NZ_NPOH01000006.1 Protein Homology CDS 138015 139508 . + 0 ID=cds-WP_058331539.1;Parent=gene-CCO46_RS09640;Dbxref=GenBank:WP_058331539.1;Name=WP_058331539.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=CCO46_RS09640;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_058331539.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 139489 140700 . + . ID=gene-CCO46_RS09645;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=CCO46_RS09645;old_locus_tag=CCO46_09645 NZ_NPOH01000006.1 Protein Homology CDS 139489 140700 . + 0 ID=cds-WP_080160042.1;Parent=gene-CCO46_RS09645;Dbxref=GenBank:WP_080160042.1;Name=WP_080160042.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=CCO46_RS09645;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_080160042.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 140708 140950 . + . ID=gene-CCO46_RS09650;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=CCO46_RS09650;old_locus_tag=CCO46_09650 NZ_NPOH01000006.1 Protein Homology CDS 140708 140950 . + 0 ID=cds-WP_058331537.1;Parent=gene-CCO46_RS09650;Dbxref=GenBank:WP_058331537.1;Name=WP_058331537.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=CCO46_RS09650;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_058331537.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 141209 141535 . + . ID=gene-CCO46_RS09655;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO46_RS09655;old_locus_tag=CCO46_09655 NZ_NPOH01000006.1 Protein Homology CDS 141209 141535 . + 0 ID=cds-WP_058331536.1;Parent=gene-CCO46_RS09655;Dbxref=GenBank:WP_058331536.1;Name=WP_058331536.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=CCO46_RS09655;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_058331536.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 141542 142132 . + . ID=gene-CCO46_RS09660;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO46_RS09660;old_locus_tag=CCO46_09660 NZ_NPOH01000006.1 Protein Homology CDS 141542 142132 . + 0 ID=cds-WP_058331535.1;Parent=gene-CCO46_RS09660;Dbxref=GenBank:WP_058331535.1;Name=WP_058331535.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=CCO46_RS09660;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_058331535.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 142129 142602 . + . ID=gene-CCO46_RS09665;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=CCO46_RS09665;old_locus_tag=CCO46_09665 NZ_NPOH01000006.1 Protein Homology CDS 142129 142602 . + 0 ID=cds-WP_058331534.1;Parent=gene-CCO46_RS09665;Dbxref=GenBank:WP_058331534.1;Name=WP_058331534.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=CCO46_RS09665;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_058331534.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 142605 144059 . + . ID=gene-CCO46_RS09670;Name=CCO46_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09670;old_locus_tag=CCO46_09670 NZ_NPOH01000006.1 Protein Homology CDS 142605 144059 . + 0 ID=cds-WP_076726490.1;Parent=gene-CCO46_RS09670;Dbxref=GenBank:WP_076726490.1;Name=WP_076726490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=CCO46_RS09670;product=type III secretion system translocon protein;protein_id=WP_076726490.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 144075 144662 . + . ID=gene-CCO46_RS09675;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=CCO46_RS09675;old_locus_tag=CCO46_09675 NZ_NPOH01000006.1 Protein Homology CDS 144075 144662 . + 0 ID=cds-WP_094887567.1;Parent=gene-CCO46_RS09675;Dbxref=GenBank:WP_094887567.1;Name=WP_094887567.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=CCO46_RS09675;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_094887567.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 144665 145081 . + . ID=gene-CCO46_RS09680;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=CCO46_RS09680;old_locus_tag=CCO46_09680 NZ_NPOH01000006.1 Protein Homology CDS 144665 145081 . + 0 ID=cds-WP_058331532.1;Parent=gene-CCO46_RS09680;Dbxref=GenBank:WP_058331532.1;Name=WP_058331532.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=CCO46_RS09680;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_058331532.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 145133 145567 . + . ID=gene-CCO46_RS09685;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=CCO46_RS09685;old_locus_tag=CCO46_09685 NZ_NPOH01000006.1 Protein Homology CDS 145133 145567 . + 0 ID=cds-WP_058331531.1;Parent=gene-CCO46_RS09685;Dbxref=GenBank:WP_058331531.1;Name=WP_058331531.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=CCO46_RS09685;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_058331531.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 145583 146365 . + . ID=gene-CCO46_RS09690;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=CCO46_RS09690;old_locus_tag=CCO46_09690 NZ_NPOH01000006.1 Protein Homology CDS 145583 146365 . + 0 ID=cds-WP_058331530.1;Parent=gene-CCO46_RS09690;Dbxref=GenBank:WP_058331530.1;Name=WP_058331530.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=CCO46_RS09690;product=type III secretion systems effector SseF;protein_id=WP_058331530.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 146362 147051 . + . ID=gene-CCO46_RS09695;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=CCO46_RS09695;old_locus_tag=CCO46_09695 NZ_NPOH01000006.1 Protein Homology CDS 146362 147051 . + 0 ID=cds-WP_058331529.1;Parent=gene-CCO46_RS09695;Dbxref=GenBank:WP_058331529.1;Name=WP_058331529.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=CCO46_RS09695;product=pathogenicity island 2 effector protein SseG;protein_id=WP_058331529.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 147148 147363 . + . ID=gene-CCO46_RS09700;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=CCO46_RS09700;old_locus_tag=CCO46_09700 NZ_NPOH01000006.1 Protein Homology CDS 147148 147363 . + 0 ID=cds-WP_000350226.1;Parent=gene-CCO46_RS09700;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=CCO46_RS09700;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 147341 147631 . + . ID=gene-CCO46_RS09705;Name=CCO46_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09705;old_locus_tag=CCO46_09705 NZ_NPOH01000006.1 Protein Homology CDS 147341 147631 . + 0 ID=cds-WP_058331528.1;Parent=gene-CCO46_RS09705;Dbxref=GenBank:WP_058331528.1;Name=WP_058331528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=CCO46_RS09705;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_058331528.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 147643 147891 . + . ID=gene-CCO46_RS09710;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=CCO46_RS09710;old_locus_tag=CCO46_09710 NZ_NPOH01000006.1 Protein Homology CDS 147643 147891 . + 0 ID=cds-WP_058331551.1;Parent=gene-CCO46_RS09710;Dbxref=GenBank:WP_058331551.1;Name=WP_058331551.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctI;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=CCO46_RS09710;product=type III secretion system inner rod subunit SctI;protein_id=WP_058331551.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 147888 148637 . + . ID=gene-CCO46_RS09715;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=CCO46_RS09715;old_locus_tag=CCO46_09715 NZ_NPOH01000006.1 Protein Homology CDS 147888 148637 . + 0 ID=cds-WP_097363316.1;Parent=gene-CCO46_RS09715;Dbxref=GenBank:WP_097363316.1;Name=WP_097363316.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=CCO46_RS09715;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_097363316.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 148655 149203 . + . ID=gene-CCO46_RS09720;Name=CCO46_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09720;old_locus_tag=CCO46_09720 NZ_NPOH01000006.1 Protein Homology CDS 148655 149203 . + 0 ID=cds-WP_058331550.1;Parent=gene-CCO46_RS09720;Dbxref=GenBank:WP_058331550.1;Name=WP_058331550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=CCO46_RS09720;product=type III secretion system domain-containing protein;protein_id=WP_058331550.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 149200 149874 . + . ID=gene-CCO46_RS09725;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=CCO46_RS09725;old_locus_tag=CCO46_09725 NZ_NPOH01000006.1 Protein Homology CDS 149200 149874 . + 0 ID=cds-WP_023138179.1;Parent=gene-CCO46_RS09725;Dbxref=GenBank:WP_023138179.1;Name=WP_023138179.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=CCO46_RS09725;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_023138179.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 149840 150856 . + . ID=gene-CCO46_RS09730;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=CCO46_RS09730;old_locus_tag=CCO46_09730 NZ_NPOH01000006.1 Protein Homology CDS 149840 150856 . + 0 ID=cds-WP_094887566.1;Parent=gene-CCO46_RS09730;Dbxref=GenBank:WP_094887566.1;Name=WP_094887566.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=CCO46_RS09730;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_094887566.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 150914 151282 . + . ID=gene-CCO46_RS09735;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=CCO46_RS09735;old_locus_tag=CCO46_09735 NZ_NPOH01000006.1 Protein Homology CDS 150914 151282 . + 0 ID=cds-WP_000383706.1;Parent=gene-CCO46_RS09735;Dbxref=GenBank:WP_000383706.1;Name=WP_000383706.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=CCO46_RS09735;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383706.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 151267 153312 . + . ID=gene-CCO46_RS09740;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=CCO46_RS09740;old_locus_tag=CCO46_09740 NZ_NPOH01000006.1 Protein Homology CDS 151267 153312 . + 0 ID=cds-WP_094887565.1;Parent=gene-CCO46_RS09740;Dbxref=GenBank:WP_094887565.1;Name=WP_094887565.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=CCO46_RS09740;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_094887565.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 153302 154603 . + . ID=gene-CCO46_RS09745;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=CCO46_RS09745;old_locus_tag=CCO46_09745 NZ_NPOH01000006.1 Protein Homology CDS 153302 154603 . + 0 ID=cds-WP_080160055.1;Parent=gene-CCO46_RS09745;Dbxref=GenBank:WP_080160055.1;Name=WP_080160055.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=CCO46_RS09745;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_080160055.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 154606 154983 . + . ID=gene-CCO46_RS09750;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=CCO46_RS09750;old_locus_tag=CCO46_09750 NZ_NPOH01000006.1 Protein Homology CDS 154606 154983 . + 0 ID=cds-WP_000449089.1;Parent=gene-CCO46_RS09750;Dbxref=GenBank:WP_000449089.1;Name=WP_000449089.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=CCO46_RS09750;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449089.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 154964 155338 . + . ID=gene-CCO46_RS09755;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=CCO46_RS09755;old_locus_tag=CCO46_09755 NZ_NPOH01000006.1 Protein Homology CDS 154964 155338 . + 0 ID=cds-WP_001223305.1;Parent=gene-CCO46_RS09755;Dbxref=GenBank:WP_001223305.1;Name=WP_001223305.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=CCO46_RS09755;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223305.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 155319 156287 . + . ID=gene-CCO46_RS09760;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=CCO46_RS09760;old_locus_tag=CCO46_09760 NZ_NPOH01000006.1 Protein Homology CDS 155319 156287 . + 0 ID=cds-WP_058331522.1;Parent=gene-CCO46_RS09760;Dbxref=GenBank:WP_058331522.1;Name=WP_058331522.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=CCO46_RS09760;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_058331522.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 156355 157002 . + . ID=gene-CCO46_RS09765;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=CCO46_RS09765;old_locus_tag=CCO46_09765 NZ_NPOH01000006.1 Protein Homology CDS 156355 157002 . + 0 ID=cds-WP_058331521.1;Parent=gene-CCO46_RS09765;Dbxref=GenBank:WP_058331521.1;Name=WP_058331521.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=CCO46_RS09765;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_058331521.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 156999 157265 . + . ID=gene-CCO46_RS09770;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=CCO46_RS09770;old_locus_tag=CCO46_09770 NZ_NPOH01000006.1 Protein Homology CDS 156999 157265 . + 0 ID=cds-WP_000999982.1;Parent=gene-CCO46_RS09770;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=CCO46_RS09770;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 157266 158045 . + . ID=gene-CCO46_RS09775;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=CCO46_RS09775;old_locus_tag=CCO46_09775 NZ_NPOH01000006.1 Protein Homology CDS 157266 158045 . + 0 ID=cds-WP_080160056.1;Parent=gene-CCO46_RS09775;Dbxref=GenBank:WP_080160056.1;Name=WP_080160056.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=CCO46_RS09775;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_080160056.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 158042 159100 . + . ID=gene-CCO46_RS09780;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=CCO46_RS09780;old_locus_tag=CCO46_09780 NZ_NPOH01000006.1 Protein Homology CDS 158042 159100 . + 0 ID=cds-WP_097363317.1;Parent=gene-CCO46_RS09780;Dbxref=GenBank:WP_097363317.1;Name=WP_097363317.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=CCO46_RS09780;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_097363317.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 159259 159335 . - . ID=gene-CCO46_RS09785;Name=CCO46_RS09785;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS09785;old_locus_tag=CCO46_09785 NZ_NPOH01000006.1 tRNAscan-SE tRNA 159259 159335 . - . ID=rna-CCO46_RS09785;Parent=gene-CCO46_RS09785;anticodon=(pos:complement(159299..159301));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS09785;product=tRNA-Val NZ_NPOH01000006.1 tRNAscan-SE exon 159259 159335 . - . ID=exon-CCO46_RS09785-1;Parent=rna-CCO46_RS09785;anticodon=(pos:complement(159299..159301));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS09785;product=tRNA-Val NZ_NPOH01000006.1 RefSeq gene 159346 159422 . - . ID=gene-CCO46_RS09790;Name=CCO46_RS09790;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS09790;old_locus_tag=CCO46_09790 NZ_NPOH01000006.1 tRNAscan-SE tRNA 159346 159422 . - . ID=rna-CCO46_RS09790;Parent=gene-CCO46_RS09790;anticodon=(pos:complement(159386..159388));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS09790;product=tRNA-Val NZ_NPOH01000006.1 tRNAscan-SE exon 159346 159422 . - . ID=exon-CCO46_RS09790-1;Parent=rna-CCO46_RS09790;anticodon=(pos:complement(159386..159388));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS09790;product=tRNA-Val NZ_NPOH01000006.1 RefSeq gene 159574 160947 . - . ID=gene-CCO46_RS09795;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=CCO46_RS09795;old_locus_tag=CCO46_09795 NZ_NPOH01000006.1 Protein Homology CDS 159574 160947 . - 0 ID=cds-WP_001175077.1;Parent=gene-CCO46_RS09795;Dbxref=GenBank:WP_001175077.1;Name=WP_001175077.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=CCO46_RS09795;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175077.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 161164 161805 . + . ID=gene-CCO46_RS09800;Name=CCO46_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09800;old_locus_tag=CCO46_09800 NZ_NPOH01000006.1 Protein Homology CDS 161164 161805 . + 0 ID=cds-WP_058331519.1;Parent=gene-CCO46_RS09800;Dbxref=GenBank:WP_058331519.1;Name=WP_058331519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=CCO46_RS09800;product=riboflavin synthase;protein_id=WP_058331519.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 161847 162995 . - . ID=gene-CCO46_RS09805;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=CCO46_RS09805;old_locus_tag=CCO46_09805 NZ_NPOH01000006.1 Protein Homology CDS 161847 162995 . - 0 ID=cds-WP_000098879.1;Parent=gene-CCO46_RS09805;Dbxref=GenBank:WP_000098879.1;Name=WP_000098879.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=CCO46_RS09805;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098879.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 163285 164490 . - . ID=gene-CCO46_RS09810;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=CCO46_RS09810;old_locus_tag=CCO46_09810 NZ_NPOH01000006.1 Protein Homology CDS 163285 164490 . - 0 ID=cds-WP_001182318.1;Parent=gene-CCO46_RS09810;Dbxref=GenBank:WP_001182318.1;Name=WP_001182318.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=CCO46_RS09810;product=purine nucleoside transporter PunC;protein_id=WP_001182318.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 164603 165535 . + . ID=gene-CCO46_RS09815;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=CCO46_RS09815;old_locus_tag=CCO46_09815 NZ_NPOH01000006.1 Protein Homology CDS 164603 165535 . + 0 ID=cds-WP_000269523.1;Parent=gene-CCO46_RS09815;Dbxref=GenBank:WP_000269523.1;Name=WP_000269523.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=CCO46_RS09815;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269523.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 165532 166557 . - . ID=gene-CCO46_RS09820;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CCO46_RS09820;old_locus_tag=CCO46_09820 NZ_NPOH01000006.1 Protein Homology CDS 165532 166557 . - 0 ID=cds-WP_000190992.1;Parent=gene-CCO46_RS09820;Dbxref=GenBank:WP_000190992.1;Name=WP_000190992.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=CCO46_RS09820;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190992.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 166854 166943 . + . ID=gene-CCO46_RS09830;Name=CCO46_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09830;old_locus_tag=CCO46_09830 NZ_NPOH01000006.1 Protein Homology CDS 166854 166943 . + 0 ID=cds-WP_000102277.1;Parent=gene-CCO46_RS09830;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=CCO46_RS09830;product=YnhF family membrane protein;protein_id=WP_000102277.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 167026 167607 . - . ID=gene-CCO46_RS09835;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=CCO46_RS09835;old_locus_tag=CCO46_09835 NZ_NPOH01000006.1 Protein Homology CDS 167026 167607 . - 0 ID=cds-WP_000007295.1;Parent=gene-CCO46_RS09835;Dbxref=GenBank:WP_000007295.1;Name=WP_000007295.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=CCO46_RS09835;product=superoxide dismutase [Fe];protein_id=WP_000007295.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 167734 168555 . - . ID=gene-CCO46_RS09840;Name=CCO46_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09840;old_locus_tag=CCO46_09840 NZ_NPOH01000006.1 Protein Homology CDS 167734 168555 . - 0 ID=cds-WP_023138185.1;Parent=gene-CCO46_RS09840;Dbxref=GenBank:WP_023138185.1;Name=WP_023138185.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=CCO46_RS09840;product=C40 family peptidase;protein_id=WP_023138185.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 168890 169237 . + . ID=gene-CCO46_RS09845;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=CCO46_RS09845;old_locus_tag=CCO46_09845 NZ_NPOH01000006.1 Protein Homology CDS 168890 169237 . + 0 ID=cds-WP_000108176.1;Parent=gene-CCO46_RS09845;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=CCO46_RS09845;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 169315 169962 . - . ID=gene-CCO46_RS09855;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=CCO46_RS09855;old_locus_tag=CCO46_09855 NZ_NPOH01000006.1 Protein Homology CDS 169315 169962 . - 0 ID=cds-WP_001282272.1;Parent=gene-CCO46_RS09855;Dbxref=GenBank:WP_001282272.1;Name=WP_001282272.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=CCO46_RS09855;product=ribonuclease T;protein_id=WP_001282272.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 170063 170470 . - . ID=gene-CCO46_RS09860;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=CCO46_RS09860;old_locus_tag=CCO46_09860 NZ_NPOH01000006.1 Protein Homology CDS 170063 170470 . - 0 ID=cds-WP_001237787.1;Parent=gene-CCO46_RS09860;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=CCO46_RS09860;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 170539 171636 . - . ID=gene-CCO46_RS09865;Name=CCO46_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09865;old_locus_tag=CCO46_09865 NZ_NPOH01000006.1 Protein Homology CDS 170539 171636 . - 0 ID=cds-WP_000092944.1;Parent=gene-CCO46_RS09865;Dbxref=GenBank:WP_000092944.1;Name=WP_000092944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=CCO46_RS09865;product=alkene reductase;protein_id=WP_000092944.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 171695 172294 . - . ID=gene-CCO46_RS09870;Name=CCO46_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09870;old_locus_tag=CCO46_09870 NZ_NPOH01000006.1 Protein Homology CDS 171695 172294 . - 0 ID=cds-WP_001041823.1;Parent=gene-CCO46_RS09870;Dbxref=GenBank:WP_001041823.1;Name=WP_001041823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=CCO46_RS09870;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041823.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 172397 172636 . + . ID=gene-CCO46_RS09875;Name=CCO46_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09875;old_locus_tag=CCO46_09875 NZ_NPOH01000006.1 Protein Homology CDS 172397 172636 . + 0 ID=cds-WP_001538148.1;Parent=gene-CCO46_RS09875;Dbxref=GenBank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=CCO46_RS09875;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 172687 173583 . + . ID=gene-CCO46_RS09880;Name=CCO46_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09880;old_locus_tag=CCO46_09880 NZ_NPOH01000006.1 Protein Homology CDS 172687 173583 . + 0 ID=cds-WP_001727487.1;Parent=gene-CCO46_RS09880;Dbxref=GenBank:WP_001727487.1;Name=WP_001727487.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=CCO46_RS09880;product=aldo/keto reductase;protein_id=WP_001727487.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 173663 174184 . + . ID=gene-CCO46_RS09885;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=CCO46_RS09885;old_locus_tag=CCO46_09885 NZ_NPOH01000006.1 Protein Homology CDS 173663 174184 . + 0 ID=cds-WP_000826820.1;Parent=gene-CCO46_RS09885;Dbxref=GenBank:WP_000826820.1;Name=WP_000826820.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=CCO46_RS09885;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826820.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 174160 176199 . - . ID=gene-CCO46_RS09890;Name=CCO46_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09890;old_locus_tag=CCO46_09890 NZ_NPOH01000006.1 Protein Homology CDS 174160 176199 . - 0 ID=cds-WP_058331518.1;Parent=gene-CCO46_RS09890;Dbxref=GenBank:WP_058331518.1;Name=WP_058331518.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=CCO46_RS09890;product=FUSC family protein;protein_id=WP_058331518.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 176199 177059 . - . ID=gene-CCO46_RS09895;Name=CCO46_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09895;old_locus_tag=CCO46_09895 NZ_NPOH01000006.1 Protein Homology CDS 176199 177059 . - 0 ID=cds-WP_001538147.1;Parent=gene-CCO46_RS09895;Dbxref=GenBank:WP_001538147.1;Name=WP_001538147.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=CCO46_RS09895;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001538147.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 177062 177298 . - . ID=gene-CCO46_RS09900;Name=CCO46_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09900;old_locus_tag=CCO46_09900 NZ_NPOH01000006.1 Protein Homology CDS 177062 177298 . - 0 ID=cds-WP_000649756.1;Parent=gene-CCO46_RS09900;Dbxref=GenBank:WP_000649756.1;Name=WP_000649756.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=CCO46_RS09900;product=DUF1656 domain-containing protein;protein_id=WP_000649756.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 177493 177933 . + . ID=gene-CCO46_RS09905;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=CCO46_RS09905;old_locus_tag=CCO46_09905 NZ_NPOH01000006.1 Protein Homology CDS 177493 177933 . + 0 ID=cds-WP_000764554.1;Parent=gene-CCO46_RS09905;Dbxref=GenBank:WP_000764554.1;Name=WP_000764554.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=CCO46_RS09905;product=transcriptional regulator SlyA;protein_id=WP_000764554.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 177981 178448 . - . ID=gene-CCO46_RS09910;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=CCO46_RS09910;old_locus_tag=CCO46_09910 NZ_NPOH01000006.1 Protein Homology CDS 177981 178448 . - 0 ID=cds-WP_000597179.1;Parent=gene-CCO46_RS09910;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=CCO46_RS09910;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 178721 179842 . + . ID=gene-CCO46_RS09915;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=CCO46_RS09915;old_locus_tag=CCO46_09915 NZ_NPOH01000006.1 Protein Homology CDS 178721 179842 . + 0 ID=cds-WP_000835021.1;Parent=gene-CCO46_RS09915;Dbxref=GenBank:WP_000835021.1;Name=WP_000835021.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=CCO46_RS09915;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835021.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 179930 180259 . + . ID=gene-CCO46_RS09920;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=CCO46_RS09920;old_locus_tag=CCO46_09920 NZ_NPOH01000006.1 Protein Homology CDS 179930 180259 . + 0 ID=cds-WP_058331516.1;Parent=gene-CCO46_RS09920;Dbxref=GenBank:WP_058331516.1;Name=WP_058331516.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=CCO46_RS09920;product=C-type lysozyme inhibitor;protein_id=WP_058331516.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 180318 180974 . + . ID=gene-CCO46_RS09925;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=CCO46_RS09925;old_locus_tag=CCO46_09925 NZ_NPOH01000006.1 Protein Homology CDS 180318 180974 . + 0 ID=cds-WP_001282334.1;Parent=gene-CCO46_RS09925;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=CCO46_RS09925;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 181101 182375 . + . ID=gene-CCO46_RS09930;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CCO46_RS09930;old_locus_tag=CCO46_09930 NZ_NPOH01000006.1 Protein Homology CDS 181101 182375 . + 0 ID=cds-WP_000168626.1;Parent=gene-CCO46_RS09930;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=CCO46_RS09930;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 182435 183295 . + . ID=gene-CCO46_RS09935;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=CCO46_RS09935;old_locus_tag=CCO46_09935 NZ_NPOH01000006.1 Protein Homology CDS 182435 183295 . + 0 ID=cds-WP_000789736.1;Parent=gene-CCO46_RS09935;Dbxref=GenBank:WP_000789736.1;Name=WP_000789736.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=CCO46_RS09935;product=pyridoxal kinase PdxY;protein_id=WP_000789736.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 183354 183959 . - . ID=gene-CCO46_RS09940;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=CCO46_RS09940;old_locus_tag=CCO46_09940 NZ_NPOH01000006.1 Protein Homology CDS 183354 183959 . - 0 ID=cds-WP_000765716.1;Parent=gene-CCO46_RS09940;Dbxref=GenBank:WP_000765716.1;Name=WP_000765716.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=CCO46_RS09940;product=glutathione transferase GstA;protein_id=WP_000765716.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 184064 185569 . - . ID=gene-CCO46_RS09945;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=CCO46_RS09945;old_locus_tag=CCO46_09945 NZ_NPOH01000006.1 Protein Homology CDS 184064 185569 . - 0 ID=cds-WP_000100911.1;Parent=gene-CCO46_RS09945;Dbxref=GenBank:WP_000100911.1;Name=WP_000100911.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=CCO46_RS09945;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100911.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 186171 186806 . - . ID=gene-CCO46_RS09950;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CCO46_RS09950;old_locus_tag=CCO46_09950 NZ_NPOH01000006.1 Protein Homology CDS 186171 186806 . - 0 ID=cds-WP_001030318.1;Parent=gene-CCO46_RS09950;Dbxref=GenBank:WP_001030318.1;Name=WP_001030318.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=CCO46_RS09950;product=endonuclease III;protein_id=WP_001030318.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 186806 187498 . - . ID=gene-CCO46_RS09955;Name=CCO46_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09955;old_locus_tag=CCO46_09955 NZ_NPOH01000006.1 Protein Homology CDS 186806 187498 . - 0 ID=cds-WP_001289628.1;Parent=gene-CCO46_RS09955;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=CCO46_RS09955;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 187501 188121 . - . ID=gene-CCO46_RS09960;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=CCO46_RS09960;old_locus_tag=CCO46_09960 NZ_NPOH01000006.1 Protein Homology CDS 187501 188121 . - 0 ID=cds-WP_000920822.1;Parent=gene-CCO46_RS09960;Dbxref=GenBank:WP_000920822.1;Name=WP_000920822.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=CCO46_RS09960;product=electron transport complex subunit RsxG;protein_id=WP_000920822.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 188125 189183 . - . ID=gene-CCO46_RS09965;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=CCO46_RS09965;old_locus_tag=CCO46_09965 NZ_NPOH01000006.1 Protein Homology CDS 188125 189183 . - 0 ID=cds-WP_000231891.1;Parent=gene-CCO46_RS09965;Dbxref=GenBank:WP_000231891.1;Name=WP_000231891.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=CCO46_RS09965;product=electron transport complex subunit RsxD;protein_id=WP_000231891.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 189184 191298 . - . ID=gene-CCO46_RS09970;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=CCO46_RS09970;old_locus_tag=CCO46_09970 NZ_NPOH01000006.1 Protein Homology CDS 189184 191298 . - 0 ID=cds-WP_097363318.1;Parent=gene-CCO46_RS09970;Dbxref=GenBank:WP_097363318.1;Name=WP_097363318.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=CCO46_RS09970;product=electron transport complex subunit RsxC;protein_id=WP_097363318.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 191291 191869 . - . ID=gene-CCO46_RS09975;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=CCO46_RS09975;old_locus_tag=CCO46_09975 NZ_NPOH01000006.1 Protein Homology CDS 191291 191869 . - 0 ID=cds-WP_001092600.1;Parent=gene-CCO46_RS09975;Dbxref=GenBank:WP_001092600.1;Name=WP_001092600.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=CCO46_RS09975;product=electron transport complex subunit RsxB;protein_id=WP_001092600.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 191869 192450 . - . ID=gene-CCO46_RS09980;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=CCO46_RS09980;old_locus_tag=CCO46_09980 NZ_NPOH01000006.1 Protein Homology CDS 191869 192450 . - 0 ID=cds-WP_000133179.1;Parent=gene-CCO46_RS09980;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=CCO46_RS09980;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 192527 192967 . - . ID=gene-CCO46_RS09985;Name=CCO46_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS09985;old_locus_tag=CCO46_09985 NZ_NPOH01000006.1 Protein Homology CDS 192527 192967 . - 0 ID=cds-WP_000214061.1;Parent=gene-CCO46_RS09985;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=CCO46_RS09985;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 193056 193271 . - . ID=gene-CCO46_RS09990;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=CCO46_RS09990;old_locus_tag=CCO46_09990 NZ_NPOH01000006.1 Protein Homology CDS 193056 193271 . - 0 ID=cds-WP_000217946.1;Parent=gene-CCO46_RS09990;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=CCO46_RS09990;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 193569 193694 . - . ID=gene-CCO46_RS09995;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=CCO46_RS09995;old_locus_tag=CCO46_09995 NZ_NPOH01000006.1 Protein Homology CDS 193569 193694 . - 0 ID=cds-WP_001708800.1;Parent=gene-CCO46_RS09995;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=CCO46_RS09995;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 193902 194942 . + . ID=gene-CCO46_RS10000;Name=CCO46_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10000;old_locus_tag=CCO46_10000 NZ_NPOH01000006.1 Protein Homology CDS 193902 194942 . + 0 ID=cds-WP_000998242.1;Parent=gene-CCO46_RS10000;Dbxref=GenBank:WP_000998242.1;Name=WP_000998242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=CCO46_RS10000;product=oxidoreductase;protein_id=WP_000998242.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 195016 196017 . - . ID=gene-CCO46_RS10005;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CCO46_RS10005;old_locus_tag=CCO46_10005 NZ_NPOH01000006.1 Protein Homology CDS 195016 196017 . - 0 ID=cds-WP_058331515.1;Parent=gene-CCO46_RS10005;Dbxref=GenBank:WP_058331515.1;Name=WP_058331515.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=CCO46_RS10005;product=adenosine deaminase;protein_id=WP_058331515.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 196235 197407 . - . ID=gene-CCO46_RS10010;Name=CCO46_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10010;old_locus_tag=CCO46_10010 NZ_NPOH01000006.1 Protein Homology CDS 196235 197407 . - 0 ID=cds-WP_058331514.1;Parent=gene-CCO46_RS10010;Dbxref=GenBank:WP_058331514.1;Name=WP_058331514.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=CCO46_RS10010;product=MalY/PatB family protein;protein_id=WP_058331514.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 197417 199009 . - . ID=gene-CCO46_RS10015;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=CCO46_RS10015;old_locus_tag=CCO46_10015 NZ_NPOH01000006.1 Protein Homology CDS 197417 199009 . - 0 ID=cds-WP_000208903.1;Parent=gene-CCO46_RS10015;Dbxref=GenBank:WP_000208903.1;Name=WP_000208903.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=malX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=CCO46_RS10015;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_000208903.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 199182 200210 . + . ID=gene-CCO46_RS10020;Name=CCO46_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10020;old_locus_tag=CCO46_10020 NZ_NPOH01000006.1 Protein Homology CDS 199182 200210 . + 0 ID=cds-WP_000951918.1;Parent=gene-CCO46_RS10020;Dbxref=GenBank:WP_000951918.1;Name=WP_000951918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=CCO46_RS10020;product=Mal regulon transcriptional regulator MalI;protein_id=WP_000951918.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 200268 201776 . - . ID=gene-CCO46_RS10025;Name=CCO46_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10025;old_locus_tag=CCO46_10025 NZ_NPOH01000006.1 Protein Homology CDS 200268 201776 . - 0 ID=cds-WP_000753331.1;Parent=gene-CCO46_RS10025;Dbxref=GenBank:WP_000753331.1;Name=WP_000753331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=CCO46_RS10025;product=YdgA family protein;protein_id=WP_000753331.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 201879 203054 . - . ID=gene-CCO46_RS10030;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CCO46_RS10030;old_locus_tag=CCO46_10030 NZ_NPOH01000006.1 Protein Homology CDS 201879 203054 . - 0 ID=cds-WP_001170624.1;Parent=gene-CCO46_RS10030;Dbxref=GenBank:WP_001170624.1;Name=WP_001170624.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=CCO46_RS10030;product=mannose-6-phosphate isomerase;protein_id=WP_001170624.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 203254 204900 . + . ID=gene-CCO46_RS10035;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=CCO46_RS10035;old_locus_tag=CCO46_10035 NZ_NPOH01000006.1 Protein Homology CDS 203254 204900 . + 0 ID=cds-WP_000066609.1;Parent=gene-CCO46_RS10035;Dbxref=GenBank:WP_000066609.1;Name=WP_000066609.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=CCO46_RS10035;product=class I fumarate hydratase;protein_id=WP_000066609.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 205068 206471 . + . ID=gene-CCO46_RS10040;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CCO46_RS10040;old_locus_tag=CCO46_10040 NZ_NPOH01000006.1 Protein Homology CDS 205068 206471 . + 0 ID=cds-WP_000259117.1;Parent=gene-CCO46_RS10040;Dbxref=GenBank:WP_000259117.1;Name=WP_000259117.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=CCO46_RS10040;product=class II fumarate hydratase;protein_id=WP_000259117.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 206468 207397 . - . ID=gene-CCO46_RS10045;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=CCO46_RS10045;old_locus_tag=CCO46_10045 NZ_NPOH01000006.1 Protein Homology CDS 206468 207397 . - 0 ID=cds-WP_000092492.1;Parent=gene-CCO46_RS10045;Dbxref=GenBank:WP_000092492.1;Name=WP_000092492.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=CCO46_RS10045;product=DNA replication terminus site-binding protein;protein_id=WP_000092492.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 207473 208774 . - . ID=gene-CCO46_RS10050;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=CCO46_RS10050;old_locus_tag=CCO46_10050 NZ_NPOH01000006.1 Protein Homology CDS 207473 208774 . - 0 ID=cds-WP_000732953.1;Parent=gene-CCO46_RS10050;Dbxref=GenBank:WP_000732953.1;Name=WP_000732953.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=CCO46_RS10050;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732953.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 208885 210591 . - . ID=gene-CCO46_RS10055;Name=CCO46_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10055;old_locus_tag=CCO46_10055 NZ_NPOH01000006.1 Protein Homology CDS 208885 210591 . - 0 ID=cds-WP_097363319.1;Parent=gene-CCO46_RS10055;Dbxref=GenBank:WP_097363319.1;Name=WP_097363319.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=CCO46_RS10055;product=amidohydrolase;protein_id=WP_097363319.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 210744 211895 . - . ID=gene-CCO46_RS10060;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=CCO46_RS10060;old_locus_tag=CCO46_10060 NZ_NPOH01000006.1 Protein Homology CDS 210744 211895 . - 0 ID=cds-WP_000824303.1;Parent=gene-CCO46_RS10060;Dbxref=GenBank:WP_000824303.1;Name=WP_000824303.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=CCO46_RS10060;product=porin OmpS2;protein_id=WP_000824303.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 212376 213107 . - . ID=gene-CCO46_RS10070;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=CCO46_RS10070;old_locus_tag=CCO46_10070 NZ_NPOH01000006.1 Protein Homology CDS 212376 213107 . - 0 ID=cds-WP_001080048.1;Parent=gene-CCO46_RS10070;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=CCO46_RS10070;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 213234 213569 . + . ID=gene-CCO46_RS10075;Name=CCO46_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10075;old_locus_tag=CCO46_10075 NZ_NPOH01000006.1 Protein Homology CDS 213234 213569 . + 0 ID=cds-WP_000524877.1;Parent=gene-CCO46_RS10075;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=CCO46_RS10075;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 213631 215013 . - . ID=gene-CCO46_RS10080;Name=CCO46_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10080;old_locus_tag=CCO46_10080 NZ_NPOH01000006.1 Protein Homology CDS 213631 215013 . - 0 ID=cds-WP_000412353.1;Parent=gene-CCO46_RS10080;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=CCO46_RS10080;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 215312 216256 . - . ID=gene-CCO46_RS10085;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=CCO46_RS10085;old_locus_tag=CCO46_10085 NZ_NPOH01000006.1 Protein Homology CDS 215312 216256 . - 0 ID=cds-WP_000769294.1;Parent=gene-CCO46_RS10085;Dbxref=GenBank:WP_000769294.1;Name=WP_000769294.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=CCO46_RS10085;product=DUF1471 family protein YdgH;protein_id=WP_000769294.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 216783 218312 . + . ID=gene-CCO46_RS10090;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=CCO46_RS10090;old_locus_tag=CCO46_10090 NZ_NPOH01000006.1 Protein Homology CDS 216783 218312 . + 0 ID=cds-WP_001219360.1;Parent=gene-CCO46_RS10090;Dbxref=GenBank:WP_001219360.1;Name=WP_001219360.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=CCO46_RS10090;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219360.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 218323 219711 . + . ID=gene-CCO46_RS10095;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=CCO46_RS10095;old_locus_tag=CCO46_10095 NZ_NPOH01000006.1 Protein Homology CDS 218323 219711 . + 0 ID=cds-WP_000014056.1;Parent=gene-CCO46_RS10095;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=CCO46_RS10095;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 219886 220920 . - . ID=gene-CCO46_RS10100;Name=CCO46_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10100;old_locus_tag=CCO46_10100 NZ_NPOH01000006.1 Protein Homology CDS 219886 220920 . - 0 ID=cds-WP_001118268.1;Parent=gene-CCO46_RS10100;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=CCO46_RS10100;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 221056 221226 . + . ID=gene-CCO46_RS25835;Name=CCO46_RS25835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25835;old_locus_tag=CCO46_10105 NZ_NPOH01000006.1 Protein Homology CDS 221056 221226 . + 0 ID=cds-WP_001539987.1;Parent=gene-CCO46_RS25835;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=CCO46_RS25835;product=hypothetical protein;protein_id=WP_001539987.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 221338 221700 . + . ID=gene-CCO46_RS10110;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=CCO46_RS10110;old_locus_tag=CCO46_10110 NZ_NPOH01000006.1 Protein Homology CDS 221338 221700 . + 0 ID=cds-WP_097363321.1;Parent=gene-CCO46_RS10110;Dbxref=GenBank:WP_097363321.1;Name=WP_097363321.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=CCO46_RS10110;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_097363321.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 221687 222016 . + . ID=gene-CCO46_RS10115;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=CCO46_RS10115;old_locus_tag=CCO46_10115 NZ_NPOH01000006.1 Protein Homology CDS 221687 222016 . + 0 ID=cds-WP_001183821.1;Parent=gene-CCO46_RS10115;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=CCO46_RS10115;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 222051 222872 . - . ID=gene-CCO46_RS10120;Name=CCO46_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10120;old_locus_tag=CCO46_10120 NZ_NPOH01000006.1 Protein Homology CDS 222051 222872 . - 0 ID=cds-WP_000549647.1;Parent=gene-CCO46_RS10120;Dbxref=GenBank:WP_000549647.1;Name=WP_000549647.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=CCO46_RS10120;product=trypsin-like serine peptidase;protein_id=WP_000549647.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 223141 223389 . - . ID=gene-CCO46_RS10130;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=CCO46_RS10130;old_locus_tag=CCO46_10130 NZ_NPOH01000006.1 Protein Homology CDS 223141 223389 . - 0 ID=cds-WP_000756314.1;Parent=gene-CCO46_RS10130;Dbxref=GenBank:WP_000756314.1;Name=WP_000756314.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=CCO46_RS10130;product=acid resistance repetitive basic protein Asr;protein_id=WP_000756314.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 223625 223717 . + . ID=gene-CCO46_RS25460;Name=CCO46_RS25460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25460 NZ_NPOH01000006.1 Protein Homology CDS 223625 223717 . + 0 ID=cds-WP_001068154.1;Parent=gene-CCO46_RS25460;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=CCO46_RS25460;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 223784 225037 . - . ID=gene-CCO46_RS10135;Name=CCO46_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10135;old_locus_tag=CCO46_10135 NZ_NPOH01000006.1 Protein Homology CDS 223784 225037 . - 0 ID=cds-WP_000091796.1;Parent=gene-CCO46_RS10135;Dbxref=GenBank:WP_000091796.1;Name=WP_000091796.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=CCO46_RS10135;product=MFS transporter;protein_id=WP_000091796.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 225157 226056 . + . ID=gene-CCO46_RS10140;Name=CCO46_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10140;old_locus_tag=CCO46_10140 NZ_NPOH01000006.1 Protein Homology CDS 225157 226056 . + 0 ID=cds-WP_001019577.1;Parent=gene-CCO46_RS10140;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=CCO46_RS10140;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 226184 227404 . + . ID=gene-CCO46_RS10150;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=CCO46_RS10150;old_locus_tag=CCO46_10150 NZ_NPOH01000006.1 Protein Homology CDS 226184 227404 . + 0 ID=cds-WP_000225094.1;Parent=gene-CCO46_RS10150;Dbxref=GenBank:WP_000225094.1;Name=WP_000225094.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=CCO46_RS10150;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225094.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 227530 228225 . + . ID=gene-CCO46_RS10155;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO46_RS10155;old_locus_tag=CCO46_10155 NZ_NPOH01000006.1 Protein Homology CDS 227530 228225 . + 0 ID=cds-WP_000919233.1;Parent=gene-CCO46_RS10155;Dbxref=GenBank:WP_000919233.1;Name=WP_000919233.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=CCO46_RS10155;product=dethiobiotin synthase;protein_id=WP_000919233.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 228181 229470 . - . ID=gene-CCO46_RS10160;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=CCO46_RS10160;old_locus_tag=CCO46_10160 NZ_NPOH01000006.1 Protein Homology CDS 228181 229470 . - 0 ID=cds-WP_061372306.1;Parent=gene-CCO46_RS10160;Dbxref=GenBank:WP_061372306.1;Name=WP_061372306.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=CCO46_RS10160;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_061372306.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 229606 230754 . - . ID=gene-CCO46_RS10165;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=CCO46_RS10165;old_locus_tag=CCO46_10165 NZ_NPOH01000006.1 Protein Homology CDS 229606 230754 . - 0 ID=cds-WP_000593092.1;Parent=gene-CCO46_RS10165;Dbxref=GenBank:WP_000593092.1;Name=WP_000593092.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=CCO46_RS10165;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593092.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 230754 231401 . - . ID=gene-CCO46_RS10170;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=CCO46_RS10170;old_locus_tag=CCO46_10170 NZ_NPOH01000006.1 Protein Homology CDS 230754 231401 . - 0 ID=cds-WP_000379677.1;Parent=gene-CCO46_RS10170;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=CCO46_RS10170;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 231411 232313 . - . ID=gene-CCO46_RS10175;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=CCO46_RS10175;old_locus_tag=CCO46_10175 NZ_NPOH01000006.1 Protein Homology CDS 231411 232313 . - 0 ID=cds-WP_023182115.1;Parent=gene-CCO46_RS10175;Dbxref=GenBank:WP_023182115.1;Name=WP_023182115.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=CCO46_RS10175;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_023182115.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 232342 233052 . - . ID=gene-CCO46_RS10180;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO46_RS10180;old_locus_tag=CCO46_10180 NZ_NPOH01000006.1 Protein Homology CDS 232342 233052 . - 0 ID=cds-WP_000557304.1;Parent=gene-CCO46_RS10180;Dbxref=GenBank:WP_000557304.1;Name=WP_000557304.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=CCO46_RS10180;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000557304.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 233357 233971 . - . ID=gene-CCO46_RS10185;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=CCO46_RS10185;old_locus_tag=CCO46_10185 NZ_NPOH01000006.1 Protein Homology CDS 233357 233971 . - 0 ID=cds-WP_000206571.1;Parent=gene-CCO46_RS10185;Dbxref=GenBank:WP_000206571.1;Name=WP_000206571.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=CCO46_RS10185;product=Tat proofreading chaperone DmsD;protein_id=WP_000206571.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 234014 234871 . - . ID=gene-CCO46_RS10190;Name=CCO46_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10190;old_locus_tag=CCO46_10190 NZ_NPOH01000006.1 Protein Homology CDS 234014 234871 . - 0 ID=cds-WP_058331512.1;Parent=gene-CCO46_RS10190;Dbxref=GenBank:WP_058331512.1;Name=WP_058331512.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=CCO46_RS10190;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_058331512.1;transl_table=11 NZ_NPOH01000006.1 RefSeq gene 234873 235241 . - . ID=gene-CCO46_RS10195;Name=CCO46_RS10195;end_range=235241,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10195;old_locus_tag=CCO46_10195;partial=true NZ_NPOH01000006.1 Protein Homology CDS 234873 235241 . - 0 ID=cds-WP_001763446.1;Parent=gene-CCO46_RS10195;Dbxref=GenBank:WP_001763446.1;Name=WP_001763446.1;end_range=235241,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO46_RS10195;partial=true;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001763446.1;transl_table=11 ##sequence-region NZ_NPOH01000007.1 1 218397 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000007.1 RefSeq region 1 218397 . + . ID=NZ_NPOH01000007.1:1..218397;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000007.1 RefSeq gene 4 119 . + . ID=gene-CCO46_RS10200;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO46_RS10200;old_locus_tag=CCO46_10200 NZ_NPOH01000007.1 cmsearch rRNA 4 119 . + . ID=rna-CCO46_RS10200;Parent=gene-CCO46_RS10200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS10200;product=5S ribosomal RNA NZ_NPOH01000007.1 cmsearch exon 4 119 . + . ID=exon-CCO46_RS10200-1;Parent=rna-CCO46_RS10200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS10200;product=5S ribosomal RNA NZ_NPOH01000007.1 RefSeq gene 328 792 . + . ID=gene-CCO46_RS10205;Name=CCO46_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10205;old_locus_tag=CCO46_10205 NZ_NPOH01000007.1 Protein Homology CDS 328 792 . + 0 ID=cds-WP_097363322.1;Parent=gene-CCO46_RS10205;Dbxref=GenBank:WP_097363322.1;Name=WP_097363322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=CCO46_RS10205;product=DUF4385 domain-containing protein;protein_id=WP_097363322.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 896 2197 . + . ID=gene-CCO46_RS10210;Name=CCO46_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10210;old_locus_tag=CCO46_10210 NZ_NPOH01000007.1 Protein Homology CDS 896 2197 . + 0 ID=cds-WP_097363323.1;Parent=gene-CCO46_RS10210;Dbxref=GenBank:WP_097363323.1;Name=WP_097363323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=CCO46_RS10210;product=MFS transporter;protein_id=WP_097363323.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 2194 2517 . - . ID=gene-CCO46_RS10215;Name=CCO46_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10215;old_locus_tag=CCO46_10215 NZ_NPOH01000007.1 Protein Homology CDS 2194 2517 . - 0 ID=cds-WP_023249612.1;Parent=gene-CCO46_RS10215;Dbxref=GenBank:WP_023249612.1;Name=WP_023249612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=CCO46_RS10215;product=YfiM family lipoprotein;protein_id=WP_023249612.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 2562 3917 . - . ID=gene-CCO46_RS10220;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=CCO46_RS10220;old_locus_tag=CCO46_10220 NZ_NPOH01000007.1 Protein Homology CDS 2562 3917 . - 0 ID=cds-WP_000949286.1;Parent=gene-CCO46_RS10220;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=CCO46_RS10220;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 4032 6692 . - . ID=gene-CCO46_RS10225;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=CCO46_RS10225;old_locus_tag=CCO46_10225 NZ_NPOH01000007.1 Protein Homology CDS 4032 6692 . - 0 ID=cds-WP_058331991.1;Parent=gene-CCO46_RS10225;Dbxref=GenBank:WP_058331991.1;Name=WP_058331991.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=CCO46_RS10225;product=protein lysine acetyltransferase;protein_id=WP_058331991.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 6746 7426 . - . ID=gene-CCO46_RS10230;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=CCO46_RS10230;old_locus_tag=CCO46_10230 NZ_NPOH01000007.1 Protein Homology CDS 6746 7426 . - 0 ID=cds-WP_023202571.1;Parent=gene-CCO46_RS10230;Dbxref=GenBank:WP_023202571.1;Name=WP_023202571.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=CCO46_RS10230;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_023202571.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 7499 7918 . - . ID=gene-CCO46_RS10235;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=CCO46_RS10235;old_locus_tag=CCO46_10235 NZ_NPOH01000007.1 Protein Homology CDS 7499 7918 . - 0 ID=cds-WP_001098732.1;Parent=gene-CCO46_RS10235;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=CCO46_RS10235;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 8122 9159 . + . ID=gene-CCO46_RS10245;Name=CCO46_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10245;old_locus_tag=CCO46_10245 NZ_NPOH01000007.1 Protein Homology CDS 8122 9159 . + 0 ID=cds-WP_058331990.1;Parent=gene-CCO46_RS10245;Dbxref=GenBank:WP_058331990.1;Name=WP_058331990.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=CCO46_RS10245;product=tRNA/rRNA methyltransferase;protein_id=WP_058331990.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 9275 9964 . - . ID=gene-CCO46_RS10250;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=CCO46_RS10250;old_locus_tag=CCO46_10250 NZ_NPOH01000007.1 Protein Homology CDS 9275 9964 . - 0 ID=cds-WP_000179978.1;Parent=gene-CCO46_RS10250;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=CCO46_RS10250;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 10283 10666 . + . ID=gene-CCO46_RS10255;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=CCO46_RS10255;old_locus_tag=CCO46_10255 NZ_NPOH01000007.1 Protein Homology CDS 10283 10666 . + 0 ID=cds-WP_000627811.1;Parent=gene-CCO46_RS10255;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=CCO46_RS10255;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 10728 11315 . - . ID=gene-CCO46_RS10260;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=CCO46_RS10260;old_locus_tag=CCO46_10260 NZ_NPOH01000007.1 Protein Homology CDS 10728 11315 . - 0 ID=cds-WP_000188415.1;Parent=gene-CCO46_RS10260;Dbxref=GenBank:WP_000188415.1;Name=WP_000188415.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=CCO46_RS10260;product=cysteine/O-acetylserine transporter;protein_id=WP_000188415.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 11418 12317 . + . ID=gene-CCO46_RS10265;Name=CCO46_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10265;old_locus_tag=CCO46_10265 NZ_NPOH01000007.1 Protein Homology CDS 11418 12317 . + 0 ID=cds-WP_001535061.1;Parent=gene-CCO46_RS10265;Dbxref=GenBank:WP_001535061.1;Name=WP_001535061.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=CCO46_RS10265;product=LysR family transcriptional regulator;protein_id=WP_001535061.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 12335 13669 . - . ID=gene-CCO46_RS10270;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=CCO46_RS10270;old_locus_tag=CCO46_10270 NZ_NPOH01000007.1 Protein Homology CDS 12335 13669 . - 0 ID=cds-WP_000219174.1;Parent=gene-CCO46_RS10270;Dbxref=GenBank:WP_000219174.1;Name=WP_000219174.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=CCO46_RS10270;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219174.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 13800 14537 . + . ID=gene-CCO46_RS10275;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=CCO46_RS10275;old_locus_tag=CCO46_10275 NZ_NPOH01000007.1 Protein Homology CDS 13800 14537 . + 0 ID=cds-WP_000083345.1;Parent=gene-CCO46_RS10275;Dbxref=GenBank:WP_000083345.1;Name=WP_000083345.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=CCO46_RS10275;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_000083345.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 14522 16144 . - . ID=gene-CCO46_RS10280;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=CCO46_RS10280;old_locus_tag=CCO46_10280 NZ_NPOH01000007.1 Protein Homology CDS 14522 16144 . - 0 ID=cds-WP_001535060.1;Parent=gene-CCO46_RS10280;Dbxref=GenBank:WP_001535060.1;Name=WP_001535060.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=CCO46_RS10280;product=L-aspartate oxidase;protein_id=WP_001535060.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 16408 16572 . + . ID=gene-CCO46_RS24920;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=CCO46_RS24920 NZ_NPOH01000007.1 Protein Homology CDS 16408 16572 . + 0 ID=cds-WP_014344135.1;Parent=gene-CCO46_RS24920;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=CCO46_RS24920;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 16569 17144 . + . ID=gene-CCO46_RS10290;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CCO46_RS10290;old_locus_tag=CCO46_10290 NZ_NPOH01000007.1 Protein Homology CDS 16569 17144 . + 0 ID=cds-WP_000003307.1;Parent=gene-CCO46_RS10290;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=CCO46_RS10290;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 17176 17826 . + . ID=gene-CCO46_RS10295;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=CCO46_RS10295;old_locus_tag=CCO46_10295 NZ_NPOH01000007.1 Protein Homology CDS 17176 17826 . + 0 ID=cds-WP_001168374.1;Parent=gene-CCO46_RS10295;Dbxref=GenBank:WP_001168374.1;Name=WP_001168374.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=CCO46_RS10295;product=anti-sigma-E factor RseA;protein_id=WP_001168374.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 17826 18782 . + . ID=gene-CCO46_RS10300;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=CCO46_RS10300;old_locus_tag=CCO46_10300 NZ_NPOH01000007.1 Protein Homology CDS 17826 18782 . + 0 ID=cds-WP_000812021.1;Parent=gene-CCO46_RS10300;Dbxref=GenBank:WP_000812021.1;Name=WP_000812021.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=CCO46_RS10300;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812021.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 18779 19258 . + . ID=gene-CCO46_RS10305;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=CCO46_RS10305;old_locus_tag=CCO46_10305 NZ_NPOH01000007.1 Protein Homology CDS 18779 19258 . + 0 ID=cds-WP_000589087.1;Parent=gene-CCO46_RS10305;Dbxref=GenBank:WP_000589087.1;Name=WP_000589087.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=CCO46_RS10305;product=SoxR-reducing system protein RseC;protein_id=WP_000589087.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 19509 21308 . + . ID=gene-CCO46_RS10310;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CCO46_RS10310;old_locus_tag=CCO46_10310 NZ_NPOH01000007.1 Protein Homology CDS 19509 21308 . + 0 ID=cds-WP_000790154.1;Parent=gene-CCO46_RS10310;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=CCO46_RS10310;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 21325 22299 . + . ID=gene-CCO46_RS10315;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CCO46_RS10315;old_locus_tag=CCO46_10315 NZ_NPOH01000007.1 Protein Homology CDS 21325 22299 . + 0 ID=cds-WP_000002559.1;Parent=gene-CCO46_RS10315;Dbxref=GenBank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=CCO46_RS10315;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 22573 23253 . + . ID=gene-CCO46_RS10325;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CCO46_RS10325;old_locus_tag=CCO46_10325 NZ_NPOH01000007.1 Protein Homology CDS 22573 23253 . + 0 ID=cds-WP_001068341.1;Parent=gene-CCO46_RS10325;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=CCO46_RS10325;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 23250 24155 . + . ID=gene-CCO46_RS10330;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CCO46_RS10330;old_locus_tag=CCO46_10330 NZ_NPOH01000007.1 Protein Homology CDS 23250 24155 . + 0 ID=cds-WP_000102230.1;Parent=gene-CCO46_RS10330;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=CCO46_RS10330;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 24167 24895 . + . ID=gene-CCO46_RS10335;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CCO46_RS10335;old_locus_tag=CCO46_10335 NZ_NPOH01000007.1 Protein Homology CDS 24167 24895 . + 0 ID=cds-WP_000399380.1;Parent=gene-CCO46_RS10335;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=CCO46_RS10335;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 24907 25638 . + . ID=gene-CCO46_RS10340;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=CCO46_RS10340;old_locus_tag=CCO46_10340 NZ_NPOH01000007.1 Protein Homology CDS 24907 25638 . + 0 ID=cds-WP_000818969.1;Parent=gene-CCO46_RS10340;Dbxref=GenBank:WP_000818969.1;Name=WP_000818969.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=CCO46_RS10340;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818969.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 25638 26018 . + . ID=gene-CCO46_RS10345;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CCO46_RS10345;old_locus_tag=CCO46_10345 NZ_NPOH01000007.1 Protein Homology CDS 25638 26018 . + 0 ID=cds-WP_000986043.1;Parent=gene-CCO46_RS10345;Dbxref=GenBank:WP_000986043.1;Name=WP_000986043.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=CCO46_RS10345;product=holo-ACP synthase;protein_id=WP_000986043.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 26130 26390 . - . ID=gene-CCO46_RS10350;Name=CCO46_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10350;old_locus_tag=CCO46_10350 NZ_NPOH01000007.1 Protein Homology CDS 26130 26390 . - 0 ID=cds-WP_001196291.1;Parent=gene-CCO46_RS10350;Dbxref=GenBank:WP_001196291.1;Name=WP_001196291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=CCO46_RS10350;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196291.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 26428 27354 . - . ID=gene-CCO46_RS10355;Name=CCO46_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10355;old_locus_tag=CCO46_10355 NZ_NPOH01000007.1 Protein Homology CDS 26428 27354 . - 0 ID=cds-WP_001022463.1;Parent=gene-CCO46_RS10355;Dbxref=GenBank:WP_001022463.1;Name=WP_001022463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=CCO46_RS10355;product=LysR family transcriptional regulator;protein_id=WP_001022463.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 27470 28666 . + . ID=gene-CCO46_RS10360;Name=CCO46_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10360;old_locus_tag=CCO46_10360 NZ_NPOH01000007.1 Protein Homology CDS 27470 28666 . + 0 ID=cds-WP_001276365.1;Parent=gene-CCO46_RS10360;Dbxref=GenBank:WP_001276365.1;Name=WP_001276365.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=CCO46_RS10360;product=L-lactate MFS transporter;protein_id=WP_001276365.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 28688 29605 . + . ID=gene-CCO46_RS10365;Name=CCO46_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10365;old_locus_tag=CCO46_10365 NZ_NPOH01000007.1 Protein Homology CDS 28688 29605 . + 0 ID=cds-WP_058331988.1;Parent=gene-CCO46_RS10365;Dbxref=GenBank:WP_058331988.1;Name=WP_058331988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=CCO46_RS10365;product=oxidoreductase;protein_id=WP_058331988.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 29644 30492 . - . ID=gene-CCO46_RS10370;Name=CCO46_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10370;old_locus_tag=CCO46_10370 NZ_NPOH01000007.1 Protein Homology CDS 29644 30492 . - 0 ID=cds-WP_000995694.1;Parent=gene-CCO46_RS10370;Dbxref=GenBank:WP_000995694.1;Name=WP_000995694.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=CCO46_RS10370;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995694.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 30608 31501 . + . ID=gene-CCO46_RS10375;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CCO46_RS10375;old_locus_tag=CCO46_10375 NZ_NPOH01000007.1 Protein Homology CDS 30608 31501 . + 0 ID=cds-WP_001048531.1;Parent=gene-CCO46_RS10375;Dbxref=GenBank:WP_001048531.1;Name=WP_001048531.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=CCO46_RS10375;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001048531.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 31512 32873 . + . ID=gene-CCO46_RS10380;Name=CCO46_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10380;old_locus_tag=CCO46_10380 NZ_NPOH01000007.1 Protein Homology CDS 31512 32873 . + 0 ID=cds-WP_001630389.1;Parent=gene-CCO46_RS10380;Dbxref=GenBank:WP_001630389.1;Name=WP_001630389.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=CCO46_RS10380;product=PTS transporter subunit EIIC;protein_id=WP_001630389.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 32877 33512 . + . ID=gene-CCO46_RS10385;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=CCO46_RS10385;old_locus_tag=CCO46_10385 NZ_NPOH01000007.1 Protein Homology CDS 32877 33512 . + 0 ID=cds-WP_000253558.1;Parent=gene-CCO46_RS10385;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=CCO46_RS10385;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 33537 34088 . + . ID=gene-CCO46_RS10390;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CCO46_RS10390;old_locus_tag=CCO46_10390 NZ_NPOH01000007.1 Protein Homology CDS 33537 34088 . + 0 ID=cds-WP_001134564.1;Parent=gene-CCO46_RS10390;Dbxref=GenBank:WP_001134564.1;Name=WP_001134564.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=CCO46_RS10390;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134564.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 34139 35683 . - . ID=gene-CCO46_RS10395;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=CCO46_RS10395;old_locus_tag=CCO46_10395 NZ_NPOH01000007.1 Protein Homology CDS 34139 35683 . - 0 ID=cds-WP_097363324.1;Parent=gene-CCO46_RS10395;Dbxref=GenBank:WP_097363324.1;Name=WP_097363324.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=CCO46_RS10395;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_097363324.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 35684 35917 . - . ID=gene-CCO46_RS10400;Name=CCO46_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10400;old_locus_tag=CCO46_10400 NZ_NPOH01000007.1 Protein Homology CDS 35684 35917 . - 0 ID=cds-WP_001747289.1;Parent=gene-CCO46_RS10400;Dbxref=GenBank:WP_001747289.1;Name=WP_001747289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=CCO46_RS10400;product=hypothetical protein;protein_id=WP_001747289.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 35939 39826 . + . ID=gene-CCO46_RS10405;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=CCO46_RS10405;old_locus_tag=CCO46_10405 NZ_NPOH01000007.1 Protein Homology CDS 35939 39826 . + 0 ID=cds-WP_097363325.1;Parent=gene-CCO46_RS10405;Dbxref=GenBank:WP_097363325.1;Name=WP_097363325.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=CCO46_RS10405;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_097363325.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 40476 41906 . + . ID=gene-CCO46_RS10410;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=CCO46_RS10410;old_locus_tag=CCO46_10410 NZ_NPOH01000007.1 Protein Homology CDS 40476 41906 . + 0 ID=cds-WP_125855796.1;Parent=gene-CCO46_RS10410;Dbxref=GenBank:WP_125855796.1;Name=WP_125855796.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=CCO46_RS10410;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_125855796.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 41908 42672 . + . ID=gene-CCO46_RS10415;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=CCO46_RS10415;old_locus_tag=CCO46_10415 NZ_NPOH01000007.1 Protein Homology CDS 41908 42672 . + 0 ID=cds-WP_001054241.1;Parent=gene-CCO46_RS10415;Dbxref=GenBank:WP_001054241.1;Name=WP_001054241.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=CCO46_RS10415;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001054241.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 42672 44006 . + . ID=gene-CCO46_RS10420;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=CCO46_RS10420;old_locus_tag=CCO46_10420 NZ_NPOH01000007.1 Protein Homology CDS 42672 44006 . + 0 ID=cds-WP_024131115.1;Parent=gene-CCO46_RS10420;Dbxref=GenBank:WP_024131115.1;Name=WP_024131115.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=CCO46_RS10420;product=two-component system response regulator GlrR;protein_id=WP_024131115.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 44083 44421 . + . ID=gene-CCO46_RS10425;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=CCO46_RS10425;old_locus_tag=CCO46_10425 NZ_NPOH01000007.1 Protein Homology CDS 44083 44421 . + 0 ID=cds-WP_000717694.1;Parent=gene-CCO46_RS10425;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=CCO46_RS10425;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 44470 45930 . - . ID=gene-CCO46_RS10430;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=CCO46_RS10430;old_locus_tag=CCO46_10430 NZ_NPOH01000007.1 Protein Homology CDS 44470 45930 . - 0 ID=cds-WP_000856793.1;Parent=gene-CCO46_RS10430;Dbxref=GenBank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=CCO46_RS10430;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 45986 48130 . - . ID=gene-CCO46_RS10435;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=CCO46_RS10435;old_locus_tag=CCO46_10435 NZ_NPOH01000007.1 Protein Homology CDS 45986 48130 . - 0 ID=cds-WP_001100652.1;Parent=gene-CCO46_RS10435;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=CCO46_RS10435;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 48213 49544 . - . ID=gene-CCO46_RS10440;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=CCO46_RS10440;old_locus_tag=CCO46_10440 NZ_NPOH01000007.1 Protein Homology CDS 48213 49544 . - 0 ID=cds-WP_000100008.1;Parent=gene-CCO46_RS10440;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=CCO46_RS10440;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 49905 51446 . - . ID=gene-CCO46_RS10445;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=CCO46_RS10445;old_locus_tag=CCO46_10445 NZ_NPOH01000007.1 Protein Homology CDS 49905 51446 . - 0 ID=cds-WP_001187135.1;Parent=gene-CCO46_RS10445;Dbxref=GenBank:WP_001187135.1;Name=WP_001187135.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=CCO46_RS10445;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187135.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 51628 52818 . - . ID=gene-CCO46_RS10450;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=CCO46_RS10450;old_locus_tag=CCO46_10450 NZ_NPOH01000007.1 Protein Homology CDS 51628 52818 . - 0 ID=cds-WP_000883147.1;Parent=gene-CCO46_RS10450;Dbxref=GenBank:WP_000883147.1;Name=WP_000883147.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=CCO46_RS10450;product=NO-inducible flavohemoprotein;protein_id=WP_000883147.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 53143 54396 . + . ID=gene-CCO46_RS10455;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CCO46_RS10455;old_locus_tag=CCO46_10455 NZ_NPOH01000007.1 Protein Homology CDS 53143 54396 . + 0 ID=cds-WP_000919178.1;Parent=gene-CCO46_RS10455;Dbxref=GenBank:WP_000919178.1;Name=WP_000919178.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=CCO46_RS10455;product=serine hydroxymethyltransferase;protein_id=WP_000919178.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 54592 55731 . + . ID=gene-CCO46_RS10460;Name=CCO46_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10460;old_locus_tag=CCO46_10460 NZ_NPOH01000007.1 Protein Homology CDS 54592 55731 . + 0 ID=cds-WP_001173729.1;Parent=gene-CCO46_RS10460;Dbxref=GenBank:WP_001173729.1;Name=WP_001173729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=CCO46_RS10460;product=3-phenylpropionate MFS transporter;protein_id=WP_001173729.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 55726 57003 . - . ID=gene-CCO46_RS10465;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=CCO46_RS10465;old_locus_tag=CCO46_10465 NZ_NPOH01000007.1 Protein Homology CDS 55726 57003 . - 0 ID=cds-WP_000982962.1;Parent=gene-CCO46_RS10465;Dbxref=GenBank:WP_000982962.1;Name=WP_000982962.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=CCO46_RS10465;product=stationary phase inducible protein CsiE;protein_id=WP_000982962.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 57129 57767 . + . ID=gene-CCO46_RS10470;Name=CCO46_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10470;old_locus_tag=CCO46_10470 NZ_NPOH01000007.1 Protein Homology CDS 57129 57767 . + 0 ID=cds-WP_001653455.1;Parent=gene-CCO46_RS10470;Dbxref=GenBank:WP_001653455.1;Name=WP_001653455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=CCO46_RS10470;product=DUF1007 family protein;protein_id=WP_001653455.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 57758 58744 . + . ID=gene-CCO46_RS10475;Name=CCO46_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10475;old_locus_tag=CCO46_10475 NZ_NPOH01000007.1 Protein Homology CDS 57758 58744 . + 0 ID=cds-WP_058331827.1;Parent=gene-CCO46_RS10475;Dbxref=GenBank:WP_058331827.1;Name=WP_058331827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=CCO46_RS10475;product=nickel/cobalt transporter;protein_id=WP_058331827.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 58745 59758 . - . ID=gene-CCO46_RS10480;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=CCO46_RS10480;old_locus_tag=CCO46_10480 NZ_NPOH01000007.1 Protein Homology CDS 58745 59758 . - 0 ID=cds-WP_000020685.1;Parent=gene-CCO46_RS10480;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=CCO46_RS10480;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 59769 60587 . - . ID=gene-CCO46_RS10485;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=CCO46_RS10485;old_locus_tag=CCO46_10485 NZ_NPOH01000007.1 Protein Homology CDS 59769 60587 . - 0 ID=cds-WP_000017587.1;Parent=gene-CCO46_RS10485;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=CCO46_RS10485;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 60591 61634 . - . ID=gene-CCO46_RS10490;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=CCO46_RS10490;old_locus_tag=CCO46_10490 NZ_NPOH01000007.1 Protein Homology CDS 60591 61634 . - 0 ID=cds-WP_000985209.1;Parent=gene-CCO46_RS10490;Dbxref=GenBank:WP_000985209.1;Name=WP_000985209.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=CCO46_RS10490;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985209.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 61816 62694 . - . ID=gene-CCO46_RS10495;Name=CCO46_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10495;old_locus_tag=CCO46_10495 NZ_NPOH01000007.1 Protein Homology CDS 61816 62694 . - 0 ID=cds-WP_058331828.1;Parent=gene-CCO46_RS10495;Dbxref=GenBank:WP_058331828.1;Name=WP_058331828.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=CCO46_RS10495;product=alpha/beta hydrolase;protein_id=WP_058331828.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 62839 63642 . - . ID=gene-CCO46_RS10500;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=CCO46_RS10500;old_locus_tag=CCO46_10500 NZ_NPOH01000007.1 Protein Homology CDS 62839 63642 . - 0 ID=cds-WP_000553473.1;Parent=gene-CCO46_RS10500;Dbxref=GenBank:WP_000553473.1;Name=WP_000553473.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=CCO46_RS10500;product=inositol-1-monophosphatase;protein_id=WP_000553473.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 63761 64492 . + . ID=gene-CCO46_RS10505;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=CCO46_RS10505;old_locus_tag=CCO46_10505 NZ_NPOH01000007.1 Protein Homology CDS 63761 64492 . + 0 ID=cds-WP_000940032.1;Parent=gene-CCO46_RS10505;Dbxref=GenBank:WP_000940032.1;Name=WP_000940032.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=CCO46_RS10505;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940032.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 64652 65146 . + . ID=gene-CCO46_RS10510;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=CCO46_RS10510;old_locus_tag=CCO46_10510 NZ_NPOH01000007.1 Protein Homology CDS 64652 65146 . + 0 ID=cds-WP_001241346.1;Parent=gene-CCO46_RS10510;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=CCO46_RS10510;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 65327 66541 . + . ID=gene-CCO46_RS10515;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=CCO46_RS10515;old_locus_tag=CCO46_10515 NZ_NPOH01000007.1 Protein Homology CDS 65327 66541 . + 0 ID=cds-WP_000775263.1;Parent=gene-CCO46_RS10515;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=CCO46_RS10515;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 66569 66955 . + . ID=gene-CCO46_RS10520;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=CCO46_RS10520;old_locus_tag=CCO46_10520 NZ_NPOH01000007.1 Protein Homology CDS 66569 66955 . + 0 ID=cds-WP_000331704.1;Parent=gene-CCO46_RS10520;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=CCO46_RS10520;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 66984 67307 . + . ID=gene-CCO46_RS10525;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=CCO46_RS10525;old_locus_tag=CCO46_10525 NZ_NPOH01000007.1 Protein Homology CDS 66984 67307 . + 0 ID=cds-WP_000028952.1;Parent=gene-CCO46_RS10525;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=CCO46_RS10525;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 67503 68018 . + . ID=gene-CCO46_RS10530;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=CCO46_RS10530;old_locus_tag=CCO46_10530 NZ_NPOH01000007.1 Protein Homology CDS 67503 68018 . + 0 ID=cds-WP_000384398.1;Parent=gene-CCO46_RS10530;Dbxref=GenBank:WP_000384398.1;Name=WP_000384398.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=CCO46_RS10530;product=co-chaperone HscB;protein_id=WP_000384398.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 68031 69881 . + . ID=gene-CCO46_RS10535;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=CCO46_RS10535;old_locus_tag=CCO46_10535 NZ_NPOH01000007.1 Protein Homology CDS 68031 69881 . + 0 ID=cds-WP_001196654.1;Parent=gene-CCO46_RS10535;Dbxref=GenBank:WP_001196654.1;Name=WP_001196654.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=CCO46_RS10535;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196654.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 69883 70218 . + . ID=gene-CCO46_RS10540;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=CCO46_RS10540;old_locus_tag=CCO46_10540 NZ_NPOH01000007.1 Protein Homology CDS 69883 70218 . + 0 ID=cds-WP_001124466.1;Parent=gene-CCO46_RS10540;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=CCO46_RS10540;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 70230 70430 . + . ID=gene-CCO46_RS10545;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=CCO46_RS10545;old_locus_tag=CCO46_10545 NZ_NPOH01000007.1 Protein Homology CDS 70230 70430 . + 0 ID=cds-WP_000523621.1;Parent=gene-CCO46_RS10545;Dbxref=GenBank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=CCO46_RS10545;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 70484 71767 . + . ID=gene-CCO46_RS10550;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=CCO46_RS10550;old_locus_tag=CCO46_10550 NZ_NPOH01000007.1 Protein Homology CDS 70484 71767 . + 0 ID=cds-WP_000133536.1;Parent=gene-CCO46_RS10550;Dbxref=GenBank:WP_000133536.1;Name=WP_000133536.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=CCO46_RS10550;product=aminopeptidase PepB;protein_id=WP_000133536.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 71877 72653 . + . ID=gene-CCO46_RS10555;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO46_RS10555;old_locus_tag=CCO46_10555 NZ_NPOH01000007.1 Protein Homology CDS 71877 72653 . + 0 ID=cds-WP_001533245.1;Parent=gene-CCO46_RS10555;Dbxref=GenBank:WP_001533245.1;Name=WP_001533245.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=CCO46_RS10555;product=enhanced serine sensitivity protein SseB;protein_id=WP_001533245.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 72690 72806 . - . ID=gene-CCO46_RS25840;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=CCO46_RS25840 NZ_NPOH01000007.1 Protein Homology CDS 72690 72806 . - 0 ID=cds-WP_350406992.1;Parent=gene-CCO46_RS25840;Dbxref=GenBank:WP_350406992.1;Name=WP_350406992.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=CCO46_RS25840;product=small toxic inner membrane protein TimP;protein_id=WP_350406992.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 73222 73890 . - . ID=gene-CCO46_RS10565;Name=CCO46_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10565;old_locus_tag=CCO46_10565 NZ_NPOH01000007.1 Protein Homology CDS 73222 73890 . - 0 ID=cds-WP_000355295.1;Parent=gene-CCO46_RS10565;Dbxref=GenBank:WP_000355295.1;Name=WP_000355295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=CCO46_RS10565;product=DUF5066 family protein;protein_id=WP_000355295.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 73933 74157 . + . ID=gene-CCO46_RS25180;Name=CCO46_RS25180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25180 NZ_NPOH01000007.1 Protein Homology CDS 73933 74157 . + 0 ID=cds-WP_170947416.1;Parent=gene-CCO46_RS25180;Dbxref=GenBank:WP_170947416.1;Name=WP_170947416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=CCO46_RS25180;product=hypothetical protein;protein_id=WP_170947416.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 74137 74979 . - . ID=gene-CCO46_RS10570;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO46_RS10570;old_locus_tag=CCO46_10570 NZ_NPOH01000007.1 Protein Homology CDS 74137 74979 . - 0 ID=cds-WP_080183166.1;Parent=gene-CCO46_RS10570;Dbxref=GenBank:WP_080183166.1;Name=WP_080183166.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=CCO46_RS10570;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_080183166.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 75188 80122 . + . ID=gene-CCO46_RS10575;Name=CCO46_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10575;old_locus_tag=CCO46_10575 NZ_NPOH01000007.1 Protein Homology CDS 75188 80122 . + 0 ID=cds-WP_094887607.1;Parent=gene-CCO46_RS10575;Dbxref=GenBank:WP_094887607.1;Name=WP_094887607.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=CCO46_RS10575;product=alpha-2-macroglobulin family protein;protein_id=WP_094887607.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 80123 82438 . + . ID=gene-CCO46_RS10580;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=CCO46_RS10580;old_locus_tag=CCO46_10580 NZ_NPOH01000007.1 Protein Homology CDS 80123 82438 . + 0 ID=cds-WP_023201541.1;Parent=gene-CCO46_RS10580;Dbxref=GenBank:WP_023201541.1;Name=WP_023201541.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=CCO46_RS10580;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_023201541.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 82594 84972 . + . ID=gene-CCO46_RS10585;Name=CCO46_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10585;old_locus_tag=CCO46_10585 NZ_NPOH01000007.1 Protein Homology CDS 82594 84972 . + 0 ID=cds-WP_061372266.1;Parent=gene-CCO46_RS10585;Dbxref=GenBank:WP_061372266.1;Name=WP_061372266.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=CCO46_RS10585;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_061372266.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 84969 85598 . + . ID=gene-CCO46_RS10590;Name=CCO46_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10590;old_locus_tag=CCO46_10590 NZ_NPOH01000007.1 Protein Homology CDS 84969 85598 . + 0 ID=cds-WP_000077436.1;Parent=gene-CCO46_RS10590;Dbxref=GenBank:WP_000077436.1;Name=WP_000077436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=CCO46_RS10590;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000077436.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 85591 86400 . + . ID=gene-CCO46_RS10595;Name=CCO46_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10595;old_locus_tag=CCO46_10595 NZ_NPOH01000007.1 Protein Homology CDS 85591 86400 . + 0 ID=cds-WP_000544885.1;Parent=gene-CCO46_RS10595;Dbxref=GenBank:WP_000544885.1;Name=WP_000544885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=CCO46_RS10595;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544885.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 86400 87263 . + . ID=gene-CCO46_RS10600;Name=CCO46_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10600;old_locus_tag=CCO46_10600 NZ_NPOH01000007.1 Protein Homology CDS 86400 87263 . + 0 ID=cds-WP_097363326.1;Parent=gene-CCO46_RS10600;Dbxref=GenBank:WP_097363326.1;Name=WP_097363326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=CCO46_RS10600;product=4Fe-4S binding protein;protein_id=WP_097363326.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 87384 87815 . + . ID=gene-CCO46_RS10605;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CCO46_RS10605;old_locus_tag=CCO46_10605 NZ_NPOH01000007.1 Protein Homology CDS 87384 87815 . + 0 ID=cds-WP_000963846.1;Parent=gene-CCO46_RS10605;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=CCO46_RS10605;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 88022 89188 . + . ID=gene-CCO46_RS10610;Name=CCO46_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10610;old_locus_tag=CCO46_10610 NZ_NPOH01000007.1 Protein Homology CDS 88022 89188 . + 0 ID=cds-WP_000003206.1;Parent=gene-CCO46_RS10610;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=CCO46_RS10610;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 89480 90490 . + . ID=gene-CCO46_RS10620;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=CCO46_RS10620;old_locus_tag=CCO46_10620 NZ_NPOH01000007.1 Protein Homology CDS 89480 90490 . + 0 ID=cds-WP_097363327.1;Parent=gene-CCO46_RS10620;Dbxref=GenBank:WP_097363327.1;Name=WP_097363327.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=CCO46_RS10620;product=cytoskeleton protein RodZ;protein_id=WP_097363327.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 90517 91635 . + . ID=gene-CCO46_RS10625;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CCO46_RS10625;old_locus_tag=CCO46_10625 NZ_NPOH01000007.1 Protein Homology CDS 90517 91635 . + 0 ID=cds-WP_000551804.1;Parent=gene-CCO46_RS10625;Dbxref=GenBank:WP_000551804.1;Name=WP_000551804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=CCO46_RS10625;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551804.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 91746 93020 . + . ID=gene-CCO46_RS10630;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CCO46_RS10630;old_locus_tag=CCO46_10630 NZ_NPOH01000007.1 Protein Homology CDS 91746 93020 . + 0 ID=cds-WP_001107139.1;Parent=gene-CCO46_RS10630;Dbxref=GenBank:WP_001107139.1;Name=WP_001107139.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=CCO46_RS10630;product=histidine--tRNA ligase;protein_id=WP_001107139.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 93034 93654 . + . ID=gene-CCO46_RS10635;Name=CCO46_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10635;old_locus_tag=CCO46_10635 NZ_NPOH01000007.1 Protein Homology CDS 93034 93654 . + 0 ID=cds-WP_000409190.1;Parent=gene-CCO46_RS10635;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=CCO46_RS10635;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 93665 94843 . + . ID=gene-CCO46_RS10640;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=CCO46_RS10640;old_locus_tag=CCO46_10640 NZ_NPOH01000007.1 Protein Homology CDS 93665 94843 . + 0 ID=cds-WP_001177072.1;Parent=gene-CCO46_RS10640;Dbxref=GenBank:WP_001177072.1;Name=WP_001177072.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=CCO46_RS10640;product=outer membrane protein assembly factor BamB;protein_id=WP_001177072.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 94960 96432 . + . ID=gene-CCO46_RS10645;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CCO46_RS10645;old_locus_tag=CCO46_10645 NZ_NPOH01000007.1 Protein Homology CDS 94960 96432 . + 0 ID=cds-WP_000249411.1;Parent=gene-CCO46_RS10645;Dbxref=GenBank:WP_000249411.1;Name=WP_000249411.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=CCO46_RS10645;product=ribosome biogenesis GTPase Der;protein_id=WP_000249411.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 96521 96742 . + . ID=gene-CCO46_RS10650;Name=CCO46_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10650;old_locus_tag=CCO46_10650 NZ_NPOH01000007.1 Protein Homology CDS 96521 96742 . + 0 ID=cds-WP_000406469.1;Parent=gene-CCO46_RS10650;Dbxref=GenBank:WP_000406469.1;Name=WP_000406469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=CCO46_RS10650;product=zinc ribbon domain-containing protein;protein_id=WP_000406469.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 97088 99280 . + . ID=gene-CCO46_RS10655;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=CCO46_RS10655;old_locus_tag=CCO46_10655 NZ_NPOH01000007.1 Protein Homology CDS 97088 99280 . + 0 ID=cds-WP_080160128.1;Parent=gene-CCO46_RS10655;Dbxref=GenBank:WP_080160128.1;Name=WP_080160128.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=CCO46_RS10655;product=intimin-like inverse autotransporter SinH;protein_id=WP_080160128.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 99338 100309 . + . ID=gene-CCO46_RS10660;Name=CCO46_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10660;old_locus_tag=CCO46_10660 NZ_NPOH01000007.1 Protein Homology CDS 99338 100309 . + 0 ID=cds-WP_080160127.1;Parent=gene-CCO46_RS10660;Dbxref=GenBank:WP_080160127.1;Name=WP_080160127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=CCO46_RS10660;product=SinI family autotransporter-associated protein;protein_id=WP_080160127.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 100429 106026 . + . ID=gene-CCO46_RS10665;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=CCO46_RS10665;old_locus_tag=CCO46_10665 NZ_NPOH01000007.1 Protein Homology CDS 100429 106026 . + 0 ID=cds-WP_080160126.1;Parent=gene-CCO46_RS10665;Dbxref=GenBank:WP_080160126.1;Name=WP_080160126.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=CCO46_RS10665;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_080160126.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 106192 113502 . + . ID=gene-CCO46_RS10670;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;locus_tag=CCO46_RS10670;old_locus_tag=CCO46_10670 NZ_NPOH01000007.1 Protein Homology CDS 106192 113502 . + 0 ID=cds-WP_058331753.1;Parent=gene-CCO46_RS10670;Dbxref=GenBank:WP_058331753.1;Name=WP_058331753.1;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=CCO46_RS10670;product=DUF823/DUF824 repeat adhesin RatB;protein_id=WP_058331753.1;transl_table=11 NZ_NPOH01000007.1 RefSeq pseudogene 113503 113603 . + . ID=gene-CCO46_RS25845;Name=CCO46_RS25845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25845;partial=true;pseudo=true;start_range=.,113503 NZ_NPOH01000007.1 Protein Homology CDS 113503 113603 . + 0 ID=cds-CCO46_RS25845;Parent=gene-CCO46_RS25845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_309258417.1;locus_tag=CCO46_RS25845;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,113503;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 114161 120331 . + . ID=gene-CCO46_RS10675;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=CCO46_RS10675;old_locus_tag=CCO46_10675 NZ_NPOH01000007.1 Protein Homology CDS 114161 120331 . + 0 ID=cds-WP_097363328.1;Parent=gene-CCO46_RS10675;Dbxref=GenBank:WP_097363328.1;Name=WP_097363328.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835909.1;locus_tag=CCO46_RS10675;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_097363328.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 120493 121842 . - . ID=gene-CCO46_RS10680;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CCO46_RS10680;old_locus_tag=CCO46_10680 NZ_NPOH01000007.1 Protein Homology CDS 120493 121842 . - 0 ID=cds-WP_000953167.1;Parent=gene-CCO46_RS10680;Dbxref=GenBank:WP_000953167.1;Name=WP_000953167.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=CCO46_RS10680;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000953167.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 122003 123469 . + . ID=gene-CCO46_RS10685;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CCO46_RS10685;old_locus_tag=CCO46_10685 NZ_NPOH01000007.1 Protein Homology CDS 122003 123469 . + 0 ID=cds-WP_000944174.1;Parent=gene-CCO46_RS10685;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=CCO46_RS10685;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 123539 125116 . + . ID=gene-CCO46_RS10690;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CCO46_RS10690;old_locus_tag=CCO46_10690 NZ_NPOH01000007.1 Protein Homology CDS 123539 125116 . + 0 ID=cds-WP_000138296.1;Parent=gene-CCO46_RS10690;Dbxref=GenBank:WP_000138296.1;Name=WP_000138296.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=CCO46_RS10690;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138296.1;transl_table=11 NZ_NPOH01000007.1 RefSeq pseudogene 125252 125571 . + . ID=gene-CCO46_RS10695;Name=CCO46_RS10695;end_range=125571,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS10695;old_locus_tag=CCO46_10695;partial=true;pseudo=true;start_range=.,125252 NZ_NPOH01000007.1 Protein Homology CDS 125252 125571 . + 0 ID=cds-CCO46_RS10695;Parent=gene-CCO46_RS10695;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=125571,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611342.1;locus_tag=CCO46_RS10695;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,125252;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 125648 125977 . - . ID=gene-CCO46_RS10700;Name=CCO46_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10700;old_locus_tag=CCO46_10700 NZ_NPOH01000007.1 Protein Homology CDS 125648 125977 . - 0 ID=cds-WP_023994424.1;Parent=gene-CCO46_RS10700;Dbxref=GenBank:WP_023994424.1;Name=WP_023994424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=CCO46_RS10700;product=DUF1493 family protein;protein_id=WP_023994424.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 125962 126423 . - . ID=gene-CCO46_RS25850;Name=CCO46_RS25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25850 NZ_NPOH01000007.1 Protein Homology CDS 125962 126423 . - 0 ID=cds-WP_000381628.1;Parent=gene-CCO46_RS25850;Dbxref=GenBank:WP_000381628.1;Name=WP_000381628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154057295.1;locus_tag=CCO46_RS25850;product=STM2901 family protein;protein_id=WP_000381628.1;transl_table=11 NZ_NPOH01000007.1 RefSeq pseudogene 126563 126682 . + . ID=gene-CCO46_RS25475;Name=CCO46_RS25475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25475;old_locus_tag=CCO46_10715;partial=true;pseudo=true;start_range=.,126563 NZ_NPOH01000007.1 Protein Homology CDS 126563 126682 . + 0 ID=cds-CCO46_RS25475;Parent=gene-CCO46_RS25475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=CCO46_RS25475;partial=true;product=hypothetical protein;pseudo=true;start_range=.,126563;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 126760 126951 . - . ID=gene-CCO46_RS10720;Name=CCO46_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10720;old_locus_tag=CCO46_10720 NZ_NPOH01000007.1 Protein Homology CDS 126760 126951 . - 0 ID=cds-WP_000075924.1;Parent=gene-CCO46_RS10720;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=CCO46_RS10720;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 127130 127264 . + . ID=gene-CCO46_RS10725;Name=CCO46_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10725;old_locus_tag=CCO46_10725 NZ_NPOH01000007.1 Protein Homology CDS 127130 127264 . + 0 ID=cds-WP_094887612.1;Parent=gene-CCO46_RS10725;Dbxref=GenBank:WP_094887612.1;Name=WP_094887612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=CCO46_RS10725;product=hypothetical protein;protein_id=WP_094887612.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 127364 129577 . + . ID=gene-CCO46_RS10730;Name=CCO46_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10730;old_locus_tag=CCO46_10730 NZ_NPOH01000007.1 Protein Homology CDS 127364 129577 . + 0 ID=cds-WP_000773643.1;Parent=gene-CCO46_RS10730;Dbxref=GenBank:WP_000773643.1;Name=WP_000773643.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=CCO46_RS10730;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000773643.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 129613 131154 . - . ID=gene-CCO46_RS10735;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CCO46_RS10735;old_locus_tag=CCO46_10735 NZ_NPOH01000007.1 Protein Homology CDS 129613 131154 . - 0 ID=cds-WP_001123330.1;Parent=gene-CCO46_RS10735;Dbxref=GenBank:WP_001123330.1;Name=WP_001123330.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=CCO46_RS10735;product=exopolyphosphatase;protein_id=WP_001123330.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 131159 133225 . - . ID=gene-CCO46_RS10740;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=CCO46_RS10740;old_locus_tag=CCO46_10740 NZ_NPOH01000007.1 Protein Homology CDS 131159 133225 . - 0 ID=cds-WP_094887613.1;Parent=gene-CCO46_RS10740;Dbxref=GenBank:WP_094887613.1;Name=WP_094887613.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=CCO46_RS10740;product=polyphosphate kinase 1;protein_id=WP_094887613.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 133414 134052 . - . ID=gene-CCO46_RS10745;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CCO46_RS10745;old_locus_tag=CCO46_10745 NZ_NPOH01000007.1 Protein Homology CDS 133414 134052 . - 0 ID=cds-WP_058331752.1;Parent=gene-CCO46_RS10745;Dbxref=GenBank:WP_058331752.1;Name=WP_058331752.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=CCO46_RS10745;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_058331752.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 134052 135089 . - . ID=gene-CCO46_RS10750;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CCO46_RS10750;old_locus_tag=CCO46_10750 NZ_NPOH01000007.1 Protein Homology CDS 134052 135089 . - 0 ID=cds-WP_000130477.1;Parent=gene-CCO46_RS10750;Dbxref=GenBank:WP_000130477.1;Name=WP_000130477.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=CCO46_RS10750;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_000130477.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 135503 136129 . + . ID=gene-CCO46_RS10755;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CCO46_RS10755;old_locus_tag=CCO46_10760 NZ_NPOH01000007.1 Protein Homology CDS 135503 136129 . + 0 ID=cds-WP_000706208.1;Parent=gene-CCO46_RS10755;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=CCO46_RS10755;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 136217 137506 . + . ID=gene-CCO46_RS10760;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=CCO46_RS10760;old_locus_tag=CCO46_10765 NZ_NPOH01000007.1 Protein Homology CDS 136217 137506 . + 0 ID=cds-WP_000198343.1;Parent=gene-CCO46_RS10760;Dbxref=GenBank:WP_000198343.1;Name=WP_000198343.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=CCO46_RS10760;product=uracil permease;protein_id=WP_000198343.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 137601 138302 . + . ID=gene-CCO46_RS10765;Name=CCO46_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10765;old_locus_tag=CCO46_10770 NZ_NPOH01000007.1 Protein Homology CDS 137601 138302 . + 0 ID=cds-WP_061835882.1;Parent=gene-CCO46_RS10765;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=CCO46_RS10765;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 138329 138688 . - . ID=gene-CCO46_RS10770;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CCO46_RS10770;old_locus_tag=CCO46_10775 NZ_NPOH01000007.1 Protein Homology CDS 138329 138688 . - 0 ID=cds-WP_000132650.1;Parent=gene-CCO46_RS10770;Dbxref=GenBank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=CCO46_RS10770;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 138728 140191 . - . ID=gene-CCO46_RS10775;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=CCO46_RS10775;old_locus_tag=CCO46_10780 NZ_NPOH01000007.1 Protein Homology CDS 138728 140191 . - 0 ID=cds-WP_094887615.1;Parent=gene-CCO46_RS10775;Dbxref=GenBank:WP_094887615.1;Name=WP_094887615.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=CCO46_RS10775;product=beta-barrel assembly-enhancing protease;protein_id=WP_094887615.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 140399 141466 . + . ID=gene-CCO46_RS10780;Name=CCO46_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10780;old_locus_tag=CCO46_10785 NZ_NPOH01000007.1 Protein Homology CDS 140399 141466 . + 0 ID=cds-WP_000892056.1;Parent=gene-CCO46_RS10780;Dbxref=GenBank:WP_000892056.1;Name=WP_000892056.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=CCO46_RS10780;product=AI-2E family transporter;protein_id=WP_000892056.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 141742 142929 . + . ID=gene-CCO46_RS10785;Name=CCO46_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10785;old_locus_tag=CCO46_10790 NZ_NPOH01000007.1 Protein Homology CDS 141742 142929 . + 0 ID=cds-WP_001533732.1;Parent=gene-CCO46_RS10785;Dbxref=GenBank:WP_001533732.1;Name=WP_001533732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=CCO46_RS10785;product=sugar diacid recognition domain-containing protein;protein_id=WP_001533732.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 142997 144265 . + . ID=gene-CCO46_RS10790;Name=CCO46_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10790;old_locus_tag=CCO46_10795 NZ_NPOH01000007.1 Protein Homology CDS 142997 144265 . + 0 ID=cds-WP_000200859.1;Parent=gene-CCO46_RS10790;Dbxref=GenBank:WP_000200859.1;Name=WP_000200859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=CCO46_RS10790;product=GntP family permease;protein_id=WP_000200859.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 144271 145410 . + . ID=gene-CCO46_RS10795;Name=CCO46_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10795;old_locus_tag=CCO46_10800 NZ_NPOH01000007.1 Protein Homology CDS 144271 145410 . + 0 ID=cds-WP_023202076.1;Parent=gene-CCO46_RS10795;Dbxref=GenBank:WP_023202076.1;Name=WP_023202076.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=CCO46_RS10795;product=glycerate kinase;protein_id=WP_023202076.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 145457 145927 . - . ID=gene-CCO46_RS10800;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CCO46_RS10800;old_locus_tag=CCO46_10805 NZ_NPOH01000007.1 Protein Homology CDS 145457 145927 . - 0 ID=cds-WP_001068686.1;Parent=gene-CCO46_RS10800;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=CCO46_RS10800;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 145927 146499 . - . ID=gene-CCO46_RS10805;Name=CCO46_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10805;old_locus_tag=CCO46_10810 NZ_NPOH01000007.1 Protein Homology CDS 145927 146499 . - 0 ID=cds-WP_000189061.1;Parent=gene-CCO46_RS10805;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=CCO46_RS10805;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 146645 147523 . + . ID=gene-CCO46_RS10810;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CCO46_RS10810;old_locus_tag=CCO46_10815 NZ_NPOH01000007.1 Protein Homology CDS 146645 147523 . + 0 ID=cds-WP_000494020.1;Parent=gene-CCO46_RS10810;Dbxref=GenBank:WP_000494020.1;Name=WP_000494020.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=CCO46_RS10810;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494020.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 147540 148574 . + . ID=gene-CCO46_RS10815;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=CCO46_RS10815;old_locus_tag=CCO46_10820 NZ_NPOH01000007.1 Protein Homology CDS 147540 148574 . + 0 ID=cds-WP_000331880.1;Parent=gene-CCO46_RS10815;Dbxref=GenBank:WP_000331880.1;Name=WP_000331880.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=CCO46_RS10815;product=outer membrane protein assembly factor BamC;protein_id=WP_000331880.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 148749 149462 . + . ID=gene-CCO46_RS10820;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CCO46_RS10820;old_locus_tag=CCO46_10825 NZ_NPOH01000007.1 Protein Homology CDS 148749 149462 . + 0 ID=cds-WP_001171630.1;Parent=gene-CCO46_RS10820;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=CCO46_RS10820;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 149593 150456 . + . ID=gene-CCO46_RS10825;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=CCO46_RS10825;old_locus_tag=CCO46_10830 NZ_NPOH01000007.1 Protein Homology CDS 149593 150456 . + 0 ID=cds-WP_001267523.1;Parent=gene-CCO46_RS10825;Dbxref=GenBank:WP_001267523.1;Name=WP_001267523.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=CCO46_RS10825;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267523.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 150472 152490 . + . ID=gene-CCO46_RS10830;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=CCO46_RS10830;old_locus_tag=CCO46_10835 NZ_NPOH01000007.1 Protein Homology CDS 150472 152490 . + 0 ID=cds-WP_094887616.1;Parent=gene-CCO46_RS10830;Dbxref=GenBank:WP_094887616.1;Name=WP_094887616.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=CCO46_RS10830;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_094887616.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 152517 152717 . - . ID=gene-CCO46_RS10835;Name=CCO46_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10835;old_locus_tag=CCO46_10840 NZ_NPOH01000007.1 Protein Homology CDS 152517 152717 . - 0 ID=cds-WP_000383839.1;Parent=gene-CCO46_RS10835;Dbxref=GenBank:WP_000383839.1;Name=WP_000383839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=CCO46_RS10835;product=YpfN family protein;protein_id=WP_000383839.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 152745 153872 . - . ID=gene-CCO46_RS10840;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=CCO46_RS10840;old_locus_tag=CCO46_10845 NZ_NPOH01000007.1 Protein Homology CDS 152745 153872 . - 0 ID=cds-WP_001277825.1;Parent=gene-CCO46_RS10840;Dbxref=GenBank:WP_001277825.1;Name=WP_001277825.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=CCO46_RS10840;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277825.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 153876 154232 . - . ID=gene-CCO46_RS10845;Name=CCO46_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10845;old_locus_tag=CCO46_10850 NZ_NPOH01000007.1 Protein Homology CDS 153876 154232 . - 0 ID=cds-WP_000631923.1;Parent=gene-CCO46_RS10845;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=CCO46_RS10845;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 154645 154704 . + . ID=gene-CCO46_RS24930;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=CCO46_RS24930 NZ_NPOH01000007.1 Protein Homology CDS 154645 154704 . + 0 ID=cds-WP_001386977.1;Parent=gene-CCO46_RS24930;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=CCO46_RS24930;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 154806 157919 . - . ID=gene-CCO46_RS10850;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=CCO46_RS10850;old_locus_tag=CCO46_10855 NZ_NPOH01000007.1 Protein Homology CDS 154806 157919 . - 0 ID=cds-WP_001533680.1;Parent=gene-CCO46_RS10850;Dbxref=GenBank:WP_001533680.1;Name=WP_001533680.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=CCO46_RS10850;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001533680.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 158104 159804 . - . ID=gene-CCO46_RS10855;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=CCO46_RS10855;old_locus_tag=CCO46_10860 NZ_NPOH01000007.1 Protein Homology CDS 158104 159804 . - 0 ID=cds-WP_000216814.1;Parent=gene-CCO46_RS10855;Dbxref=GenBank:WP_000216814.1;Name=WP_000216814.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=CCO46_RS10855;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000216814.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 159990 161951 . + . ID=gene-CCO46_RS10860;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=CCO46_RS10860;old_locus_tag=CCO46_10865 NZ_NPOH01000007.1 Protein Homology CDS 159990 161951 . + 0 ID=cds-WP_001078937.1;Parent=gene-CCO46_RS10860;Dbxref=GenBank:WP_001078937.1;Name=WP_001078937.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=CCO46_RS10860;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078937.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 162400 163698 . - . ID=gene-CCO46_RS10865;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=CCO46_RS10865;old_locus_tag=CCO46_10870 NZ_NPOH01000007.1 Protein Homology CDS 162400 163698 . - 0 ID=cds-WP_000673293.1;Parent=gene-CCO46_RS10865;Dbxref=GenBank:WP_000673293.1;Name=WP_000673293.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=CCO46_RS10865;product=penicillin binding protein PBP4B;protein_id=WP_000673293.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 163902 164477 . + . ID=gene-CCO46_RS10870;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=CCO46_RS10870;old_locus_tag=CCO46_10875 NZ_NPOH01000007.1 Protein Homology CDS 163902 164477 . + 0 ID=cds-WP_000084036.1;Parent=gene-CCO46_RS10870;Dbxref=GenBank:WP_000084036.1;Name=WP_000084036.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=CCO46_RS10870;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084036.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 164602 165645 . + . ID=gene-CCO46_RS10875;Name=CCO46_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10875;old_locus_tag=CCO46_10880 NZ_NPOH01000007.1 Protein Homology CDS 164602 165645 . + 0 ID=cds-WP_001270670.1;Parent=gene-CCO46_RS10875;Dbxref=GenBank:WP_001270670.1;Name=WP_001270670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=CCO46_RS10875;product=DUF1176 domain-containing protein;protein_id=WP_001270670.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 165773 166003 . + . ID=gene-CCO46_RS10880;Name=CCO46_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10880;old_locus_tag=CCO46_10885 NZ_NPOH01000007.1 Protein Homology CDS 165773 166003 . + 0 ID=cds-WP_000700635.1;Parent=gene-CCO46_RS10880;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=CCO46_RS10880;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 166066 168066 . - . ID=gene-CCO46_RS10885;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO46_RS10885;old_locus_tag=CCO46_10890 NZ_NPOH01000007.1 Protein Homology CDS 166066 168066 . - 0 ID=cds-WP_061372251.1;Parent=gene-CCO46_RS10885;Dbxref=GenBank:WP_061372251.1;Name=WP_061372251.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=CCO46_RS10885;product=transketolase;protein_id=WP_061372251.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 168086 169036 . - . ID=gene-CCO46_RS10890;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO46_RS10890;old_locus_tag=CCO46_10895 NZ_NPOH01000007.1 Protein Homology CDS 168086 169036 . - 0 ID=cds-WP_058331748.1;Parent=gene-CCO46_RS10890;Dbxref=GenBank:WP_058331748.1;Name=WP_058331748.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=CCO46_RS10890;product=transaldolase;protein_id=WP_058331748.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 169308 171587 . + . ID=gene-CCO46_RS10900;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=CCO46_RS10900;old_locus_tag=CCO46_10905 NZ_NPOH01000007.1 Protein Homology CDS 169308 171587 . + 0 ID=cds-WP_000344299.1;Parent=gene-CCO46_RS10900;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=CCO46_RS10900;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 172004 172339 . + . ID=gene-CCO46_RS10905;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=CCO46_RS10905;old_locus_tag=CCO46_10910 NZ_NPOH01000007.1 Protein Homology CDS 172004 172339 . + 0 ID=cds-WP_001031445.1;Parent=gene-CCO46_RS10905;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=CCO46_RS10905;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 172352 172831 . + . ID=gene-CCO46_RS10910;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=CCO46_RS10910;old_locus_tag=CCO46_10915 NZ_NPOH01000007.1 Protein Homology CDS 172352 172831 . + 0 ID=cds-WP_000820751.1;Parent=gene-CCO46_RS10910;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=CCO46_RS10910;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 172809 173498 . + . ID=gene-CCO46_RS10915;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=CCO46_RS10915;old_locus_tag=CCO46_10920 NZ_NPOH01000007.1 Protein Homology CDS 172809 173498 . + 0 ID=cds-WP_097363329.1;Parent=gene-CCO46_RS10915;Dbxref=GenBank:WP_097363329.1;Name=WP_097363329.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=CCO46_RS10915;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_097363329.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 173495 174298 . + . ID=gene-CCO46_RS10920;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=CCO46_RS10920;old_locus_tag=CCO46_10925 NZ_NPOH01000007.1 Protein Homology CDS 173495 174298 . + 0 ID=cds-WP_000997656.1;Parent=gene-CCO46_RS10920;Dbxref=GenBank:WP_000997656.1;Name=WP_000997656.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=CCO46_RS10920;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997656.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 174295 175311 . + . ID=gene-CCO46_RS10925;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO46_RS10925;old_locus_tag=CCO46_10930 NZ_NPOH01000007.1 Protein Homology CDS 174295 175311 . + 0 ID=cds-WP_000582927.1;Parent=gene-CCO46_RS10925;Dbxref=GenBank:WP_000582927.1;Name=WP_000582927.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=CCO46_RS10925;product=phosphate acetyltransferase;protein_id=WP_000582927.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 175352 175642 . + . ID=gene-CCO46_RS10930;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=CCO46_RS10930;old_locus_tag=CCO46_10935 NZ_NPOH01000007.1 Protein Homology CDS 175352 175642 . + 0 ID=cds-WP_000387716.1;Parent=gene-CCO46_RS10930;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=CCO46_RS10930;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 175755 176042 . + . ID=gene-CCO46_RS10935;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=CCO46_RS10935;old_locus_tag=CCO46_10940 NZ_NPOH01000007.1 Protein Homology CDS 175755 176042 . + 0 ID=cds-WP_001522340.1;Parent=gene-CCO46_RS10935;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=CCO46_RS10935;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 176054 177457 . + . ID=gene-CCO46_RS10940;Name=CCO46_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10940;old_locus_tag=CCO46_10945 NZ_NPOH01000007.1 Protein Homology CDS 176054 177457 . + 0 ID=cds-WP_001075640.1;Parent=gene-CCO46_RS10940;Dbxref=GenBank:WP_001075640.1;Name=WP_001075640.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=CCO46_RS10940;product=aldehyde dehydrogenase family protein;protein_id=WP_001075640.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 177468 178307 . + . ID=gene-CCO46_RS10945;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=CCO46_RS10945;old_locus_tag=CCO46_10950 NZ_NPOH01000007.1 Protein Homology CDS 177468 178307 . + 0 ID=cds-WP_000929675.1;Parent=gene-CCO46_RS10945;Dbxref=GenBank:WP_000929675.1;Name=WP_000929675.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=CCO46_RS10945;product=ethanolamine utilization protein EutJ;protein_id=WP_000929675.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 178297 179484 . + . ID=gene-CCO46_RS10950;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=CCO46_RS10950;old_locus_tag=CCO46_10955 NZ_NPOH01000007.1 Protein Homology CDS 178297 179484 . + 0 ID=cds-WP_001147501.1;Parent=gene-CCO46_RS10950;Dbxref=GenBank:WP_001147501.1;Name=WP_001147501.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=CCO46_RS10950;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147501.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 179604 180830 . + . ID=gene-CCO46_RS10955;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=CCO46_RS10955;old_locus_tag=CCO46_10960 NZ_NPOH01000007.1 Protein Homology CDS 179604 180830 . + 0 ID=cds-WP_000512359.1;Parent=gene-CCO46_RS10955;Dbxref=GenBank:WP_000512359.1;Name=WP_000512359.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=CCO46_RS10955;product=ethanolamine utilization protein EutH;protein_id=WP_000512359.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 180827 182230 . + . ID=gene-CCO46_RS10960;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=CCO46_RS10960;old_locus_tag=CCO46_10965 NZ_NPOH01000007.1 Protein Homology CDS 180827 182230 . + 0 ID=cds-WP_097363330.1;Parent=gene-CCO46_RS10960;Dbxref=GenBank:WP_097363330.1;Name=WP_097363330.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=CCO46_RS10960;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_097363330.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 182242 183603 . + . ID=gene-CCO46_RS10965;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=CCO46_RS10965;old_locus_tag=CCO46_10970 NZ_NPOH01000007.1 Protein Homology CDS 182242 183603 . + 0 ID=cds-WP_000769990.1;Parent=gene-CCO46_RS10965;Dbxref=GenBank:WP_000769990.1;Name=WP_000769990.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=CCO46_RS10965;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769990.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 183622 184518 . + . ID=gene-CCO46_RS10970;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=CCO46_RS10970;old_locus_tag=CCO46_10975 NZ_NPOH01000007.1 Protein Homology CDS 183622 184518 . + 0 ID=cds-WP_000372344.1;Parent=gene-CCO46_RS10970;Dbxref=GenBank:WP_000372344.1;Name=WP_000372344.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=CCO46_RS10970;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372344.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 184528 185187 . + . ID=gene-CCO46_RS10975;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=CCO46_RS10975;old_locus_tag=CCO46_10980 NZ_NPOH01000007.1 Protein Homology CDS 184528 185187 . + 0 ID=cds-WP_001111056.1;Parent=gene-CCO46_RS10975;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=CCO46_RS10975;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 185200 185694 . + . ID=gene-CCO46_RS10980;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=CCO46_RS10980;old_locus_tag=CCO46_10985 NZ_NPOH01000007.1 Protein Homology CDS 185200 185694 . + 0 ID=cds-WP_000606271.1;Parent=gene-CCO46_RS10980;Dbxref=GenBank:WP_000606271.1;Name=WP_000606271.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=CCO46_RS10980;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606271.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 185742 186794 . + . ID=gene-CCO46_RS10985;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=CCO46_RS10985;old_locus_tag=CCO46_10990 NZ_NPOH01000007.1 Protein Homology CDS 185742 186794 . + 0 ID=cds-WP_000753666.1;Parent=gene-CCO46_RS10985;Dbxref=GenBank:WP_000753666.1;Name=WP_000753666.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=CCO46_RS10985;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753666.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 186994 188271 . - . ID=gene-CCO46_RS10995;Name=CCO46_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS10995;old_locus_tag=CCO46_11000 NZ_NPOH01000007.1 Protein Homology CDS 186994 188271 . - 0 ID=cds-WP_000344435.1;Parent=gene-CCO46_RS10995;Dbxref=GenBank:WP_000344435.1;Name=WP_000344435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=CCO46_RS10995;product=DUF1963 domain-containing protein;protein_id=WP_000344435.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 188400 188729 . - . ID=gene-CCO46_RS11000;Name=CCO46_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11000;old_locus_tag=CCO46_11005 NZ_NPOH01000007.1 Protein Homology CDS 188400 188729 . - 0 ID=cds-WP_001194342.1;Parent=gene-CCO46_RS11000;Dbxref=GenBank:WP_001194342.1;Name=WP_001194342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=CCO46_RS11000;product=hypothetical protein;protein_id=WP_001194342.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 188750 189649 . - . ID=gene-CCO46_RS11005;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=CCO46_RS11005;old_locus_tag=CCO46_11010 NZ_NPOH01000007.1 Protein Homology CDS 188750 189649 . - 0 ID=cds-WP_080160444.1;Parent=gene-CCO46_RS11005;Dbxref=GenBank:WP_080160444.1;Name=WP_080160444.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=CCO46_RS11005;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_080160444.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 189652 190521 . - . ID=gene-CCO46_RS11010;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=CCO46_RS11010;old_locus_tag=CCO46_11015 NZ_NPOH01000007.1 Protein Homology CDS 189652 190521 . - 0 ID=cds-WP_000102880.1;Parent=gene-CCO46_RS11010;Dbxref=GenBank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=CCO46_RS11010;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 190734 191159 . + . ID=gene-CCO46_RS11015;Name=CCO46_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11015;old_locus_tag=CCO46_11020 NZ_NPOH01000007.1 Protein Homology CDS 190734 191159 . + 0 ID=cds-WP_000406008.1;Parent=gene-CCO46_RS11015;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=CCO46_RS11015;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 191146 191595 . + . ID=gene-CCO46_RS11020;Name=CCO46_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11020;old_locus_tag=CCO46_11025 NZ_NPOH01000007.1 Protein Homology CDS 191146 191595 . + 0 ID=cds-WP_000842939.1;Parent=gene-CCO46_RS11020;Dbxref=GenBank:WP_000842939.1;Name=WP_000842939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=CCO46_RS11020;product=DUF2919 domain-containing protein;protein_id=WP_000842939.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 191657 192232 . + . ID=gene-CCO46_RS11025;Name=CCO46_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11025;old_locus_tag=CCO46_11030 NZ_NPOH01000007.1 Protein Homology CDS 191657 192232 . + 0 ID=cds-WP_000838968.1;Parent=gene-CCO46_RS11025;Dbxref=GenBank:WP_000838968.1;Name=WP_000838968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=CCO46_RS11025;product=RpoE-regulated lipoprotein;protein_id=WP_000838968.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 192327 193226 . + . ID=gene-CCO46_RS11030;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=CCO46_RS11030;old_locus_tag=CCO46_11035 NZ_NPOH01000007.1 Protein Homology CDS 192327 193226 . + 0 ID=cds-WP_000084583.1;Parent=gene-CCO46_RS11030;Dbxref=GenBank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=CCO46_RS11030;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 193464 194255 . + . ID=gene-CCO46_RS11035;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=CCO46_RS11035;old_locus_tag=CCO46_11040 NZ_NPOH01000007.1 Protein Homology CDS 193464 194255 . + 0 ID=cds-WP_000517460.1;Parent=gene-CCO46_RS11035;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=CCO46_RS11035;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 194413 195429 . + . ID=gene-CCO46_RS11040;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=CCO46_RS11040;old_locus_tag=CCO46_11045 NZ_NPOH01000007.1 Protein Homology CDS 194413 195429 . + 0 ID=cds-WP_000290274.1;Parent=gene-CCO46_RS11040;Dbxref=GenBank:WP_000290274.1;Name=WP_000290274.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=CCO46_RS11040;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290274.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 195429 196262 . + . ID=gene-CCO46_RS11045;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=CCO46_RS11045;old_locus_tag=CCO46_11050 NZ_NPOH01000007.1 Protein Homology CDS 195429 196262 . + 0 ID=cds-WP_000881746.1;Parent=gene-CCO46_RS11045;Dbxref=GenBank:WP_000881746.1;Name=WP_000881746.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=CCO46_RS11045;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881746.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 196262 197137 . + . ID=gene-CCO46_RS11050;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=CCO46_RS11050;old_locus_tag=CCO46_11055 NZ_NPOH01000007.1 Protein Homology CDS 196262 197137 . + 0 ID=cds-WP_000852705.1;Parent=gene-CCO46_RS11050;Dbxref=GenBank:WP_000852705.1;Name=WP_000852705.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=CCO46_RS11050;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852705.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 197127 198221 . + . ID=gene-CCO46_RS11055;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=CCO46_RS11055;old_locus_tag=CCO46_11060 NZ_NPOH01000007.1 Protein Homology CDS 197127 198221 . + 0 ID=cds-WP_000021073.1;Parent=gene-CCO46_RS11055;Dbxref=GenBank:WP_000021073.1;Name=WP_000021073.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=CCO46_RS11055;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021073.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 198342 199253 . + . ID=gene-CCO46_RS11060;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=CCO46_RS11060;old_locus_tag=CCO46_11065 NZ_NPOH01000007.1 Protein Homology CDS 198342 199253 . + 0 ID=cds-WP_001093890.1;Parent=gene-CCO46_RS11060;Dbxref=GenBank:WP_001093890.1;Name=WP_001093890.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=CCO46_RS11060;product=cysteine synthase CysM;protein_id=WP_001093890.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 199286 199663 . - . ID=gene-CCO46_RS11065;Name=CCO46_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11065;old_locus_tag=CCO46_11070 NZ_NPOH01000007.1 Protein Homology CDS 199286 199663 . - 0 ID=cds-WP_000710731.1;Parent=gene-CCO46_RS11065;Dbxref=GenBank:WP_000710731.1;Name=WP_000710731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710726.1;locus_tag=CCO46_RS11065;product=YfeK family protein;protein_id=WP_000710731.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 199722 200441 . - . ID=gene-CCO46_RS11070;Name=CCO46_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11070;old_locus_tag=CCO46_11075 NZ_NPOH01000007.1 Protein Homology CDS 199722 200441 . - 0 ID=cds-WP_001728959.1;Parent=gene-CCO46_RS11070;Dbxref=GenBank:WP_001728959.1;Name=WP_001728959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=CCO46_RS11070;product=GMP synthase;protein_id=WP_001728959.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 200456 201748 . - . ID=gene-CCO46_RS11075;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=CCO46_RS11075;old_locus_tag=CCO46_11080 NZ_NPOH01000007.1 Protein Homology CDS 200456 201748 . - 0 ID=cds-WP_058331744.1;Parent=gene-CCO46_RS11075;Dbxref=GenBank:WP_058331744.1;Name=WP_058331744.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=CCO46_RS11075;product=transcriptional regulator PtsJ;protein_id=WP_058331744.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 201831 202697 . + . ID=gene-CCO46_RS11080;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=CCO46_RS11080;old_locus_tag=CCO46_11085 NZ_NPOH01000007.1 Protein Homology CDS 201831 202697 . + 0 ID=cds-WP_058331743.1;Parent=gene-CCO46_RS11080;Dbxref=GenBank:WP_058331743.1;Name=WP_058331743.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=CCO46_RS11080;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_058331743.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 202694 202933 . + . ID=gene-CCO46_RS11085;Name=CCO46_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11085;old_locus_tag=CCO46_11090 NZ_NPOH01000007.1 Protein Homology CDS 202694 202933 . + 0 ID=cds-WP_000844541.1;Parent=gene-CCO46_RS11085;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=CCO46_RS11085;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 203083 203592 . - . ID=gene-CCO46_RS11090;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=CCO46_RS11090;old_locus_tag=CCO46_11095 NZ_NPOH01000007.1 Protein Homology CDS 203083 203592 . - 0 ID=cds-WP_000522253.1;Parent=gene-CCO46_RS11090;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=CCO46_RS11090;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 203633 205360 . - . ID=gene-CCO46_RS11095;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=CCO46_RS11095;old_locus_tag=CCO46_11100 NZ_NPOH01000007.1 Protein Homology CDS 203633 205360 . - 0 ID=cds-WP_000623118.1;Parent=gene-CCO46_RS11095;Dbxref=GenBank:WP_000623118.1;Name=WP_000623118.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=CCO46_RS11095;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623118.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 205409 205666 . - . ID=gene-CCO46_RS11100;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=CCO46_RS11100;old_locus_tag=CCO46_11105 NZ_NPOH01000007.1 Protein Homology CDS 205409 205666 . - 0 ID=cds-WP_000487600.1;Parent=gene-CCO46_RS11100;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=CCO46_RS11100;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 206050 207021 . - . ID=gene-CCO46_RS11105;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CCO46_RS11105;old_locus_tag=CCO46_11110 NZ_NPOH01000007.1 Protein Homology CDS 206050 207021 . - 0 ID=cds-WP_000036902.1;Parent=gene-CCO46_RS11105;Dbxref=GenBank:WP_000036902.1;Name=WP_000036902.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=CCO46_RS11105;product=cysteine synthase A;protein_id=WP_000036902.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 207185 207946 . - . ID=gene-CCO46_RS11110;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=CCO46_RS11110;old_locus_tag=CCO46_11115 NZ_NPOH01000007.1 Protein Homology CDS 207185 207946 . - 0 ID=cds-WP_000255008.1;Parent=gene-CCO46_RS11110;Dbxref=GenBank:WP_000255008.1;Name=WP_000255008.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=CCO46_RS11110;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 208178 209164 . + . ID=gene-CCO46_RS11115;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=CCO46_RS11115;old_locus_tag=CCO46_11120 NZ_NPOH01000007.1 Protein Homology CDS 208178 209164 . + 0 ID=cds-WP_000983126.1;Parent=gene-CCO46_RS11115;Dbxref=GenBank:WP_000983126.1;Name=WP_000983126.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=CCO46_RS11115;product=cell division protein ZipA;protein_id=WP_000983126.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 209236 211251 . + . ID=gene-CCO46_RS11120;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CCO46_RS11120;old_locus_tag=CCO46_11125 NZ_NPOH01000007.1 Protein Homology CDS 209236 211251 . + 0 ID=cds-WP_097363331.1;Parent=gene-CCO46_RS11120;Dbxref=GenBank:WP_097363331.1;Name=WP_097363331.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=CCO46_RS11120;product=NAD-dependent DNA ligase LigA;protein_id=WP_097363331.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 211253 211471 . + . ID=gene-CCO46_RS11125;Name=CCO46_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11125;old_locus_tag=CCO46_11130 NZ_NPOH01000007.1 Protein Homology CDS 211253 211471 . + 0 ID=cds-WP_001519708.1;Parent=gene-CCO46_RS11125;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=CCO46_RS11125;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 211468 212466 . - . ID=gene-CCO46_RS11130;Name=CCO46_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11130;old_locus_tag=CCO46_11135 NZ_NPOH01000007.1 Protein Homology CDS 211468 212466 . - 0 ID=cds-WP_000765580.1;Parent=gene-CCO46_RS11130;Dbxref=GenBank:WP_000765580.1;Name=WP_000765580.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=CCO46_RS11130;product=bile acid:sodium symporter family protein;protein_id=WP_000765580.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 212556 213482 . + . ID=gene-CCO46_RS11135;Name=CCO46_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11135;old_locus_tag=CCO46_11140 NZ_NPOH01000007.1 Protein Homology CDS 212556 213482 . + 0 ID=cds-WP_001109831.1;Parent=gene-CCO46_RS11135;Dbxref=GenBank:WP_001109831.1;Name=WP_001109831.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=CCO46_RS11135;product=LysR family transcriptional regulator;protein_id=WP_001109831.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 213544 214305 . - . ID=gene-CCO46_RS11140;Name=CCO46_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11140;old_locus_tag=CCO46_11145 NZ_NPOH01000007.1 Protein Homology CDS 213544 214305 . - 0 ID=cds-WP_000722926.1;Parent=gene-CCO46_RS11140;Dbxref=GenBank:WP_000722926.1;Name=WP_000722926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=CCO46_RS11140;product=outer membrane protein;protein_id=WP_000722926.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 214561 215394 . + . ID=gene-CCO46_RS11145;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=CCO46_RS11145;old_locus_tag=CCO46_11150 NZ_NPOH01000007.1 Protein Homology CDS 214561 215394 . + 0 ID=cds-WP_001119748.1;Parent=gene-CCO46_RS11145;Dbxref=GenBank:WP_001119748.1;Name=WP_001119748.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=CCO46_RS11145;product=xanthosine phosphorylase;protein_id=WP_001119748.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 215449 216705 . + . ID=gene-CCO46_RS11150;Name=CCO46_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11150;old_locus_tag=CCO46_11155 NZ_NPOH01000007.1 Protein Homology CDS 215449 216705 . + 0 ID=cds-WP_058331741.1;Parent=gene-CCO46_RS11150;Dbxref=GenBank:WP_058331741.1;Name=WP_058331741.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=CCO46_RS11150;product=nucleoside permease;protein_id=WP_058331741.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 216764 216922 . + . ID=gene-CCO46_RS11155;Name=CCO46_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11155;old_locus_tag=CCO46_11160 NZ_NPOH01000007.1 Protein Homology CDS 216764 216922 . + 0 ID=cds-WP_000658727.1;Parent=gene-CCO46_RS11155;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=CCO46_RS11155;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 216974 217858 . + . ID=gene-CCO46_RS11160;Name=CCO46_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11160;old_locus_tag=CCO46_11165 NZ_NPOH01000007.1 Protein Homology CDS 216974 217858 . + 0 ID=cds-WP_000438884.1;Parent=gene-CCO46_RS11160;Dbxref=GenBank:WP_000438884.1;Name=WP_000438884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=CCO46_RS11160;product=LysR family transcriptional regulator;protein_id=WP_000438884.1;transl_table=11 NZ_NPOH01000007.1 RefSeq gene 218073 218148 . - . ID=gene-CCO46_RS11165;Name=CCO46_RS11165;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS11165;old_locus_tag=CCO46_11170 NZ_NPOH01000007.1 tRNAscan-SE tRNA 218073 218148 . - . ID=rna-CCO46_RS11165;Parent=gene-CCO46_RS11165;anticodon=(pos:complement(218113..218115));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11165;product=tRNA-Lys NZ_NPOH01000007.1 tRNAscan-SE exon 218073 218148 . - . ID=exon-CCO46_RS11165-1;Parent=rna-CCO46_RS11165;anticodon=(pos:complement(218113..218115));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11165;product=tRNA-Lys NZ_NPOH01000007.1 RefSeq gene 218153 218228 . - . ID=gene-CCO46_RS11170;Name=CCO46_RS11170;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS11170;old_locus_tag=CCO46_11175 NZ_NPOH01000007.1 tRNAscan-SE tRNA 218153 218228 . - . ID=rna-CCO46_RS11170;Parent=gene-CCO46_RS11170;anticodon=(pos:complement(218193..218195));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11170;product=tRNA-Val NZ_NPOH01000007.1 tRNAscan-SE exon 218153 218228 . - . ID=exon-CCO46_RS11170-1;Parent=rna-CCO46_RS11170;anticodon=(pos:complement(218193..218195));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11170;product=tRNA-Val NZ_NPOH01000007.1 RefSeq gene 218272 218347 . - . ID=gene-CCO46_RS11175;Name=CCO46_RS11175;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS11175;old_locus_tag=CCO46_11180 NZ_NPOH01000007.1 tRNAscan-SE tRNA 218272 218347 . - . ID=rna-CCO46_RS11175;Parent=gene-CCO46_RS11175;anticodon=(pos:complement(218312..218314));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11175;product=tRNA-Val NZ_NPOH01000007.1 tRNAscan-SE exon 218272 218347 . - . ID=exon-CCO46_RS11175-1;Parent=rna-CCO46_RS11175;anticodon=(pos:complement(218312..218314));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11175;product=tRNA-Val ##sequence-region NZ_NPOH01000008.1 1 211056 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000008.1 RefSeq region 1 211056 . + . ID=NZ_NPOH01000008.1:1..211056;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000008.1 RefSeq gene 1 101 . + . ID=gene-CCO46_RS25480;Name=CCO46_RS25480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25480;partial=true;start_range=.,1 NZ_NPOH01000008.1 Protein Homology CDS 1 101 . + 2 ID=cds-WP_237585218.1;Parent=gene-CCO46_RS25480;Dbxref=GenBank:WP_237585218.1;Name=WP_237585218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=CCO46_RS25480;partial=true;product=hypothetical protein;protein_id=WP_237585218.1;start_range=.,1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 226 942 . - . ID=gene-CCO46_RS11180;Name=CCO46_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11180;old_locus_tag=CCO46_11185 NZ_NPOH01000008.1 Protein Homology CDS 226 942 . - 0 ID=cds-WP_000532939.1;Parent=gene-CCO46_RS11180;Dbxref=GenBank:WP_000532939.1;Name=WP_000532939.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=CCO46_RS11180;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 1502 3133 . - . ID=gene-CCO46_RS11190;Name=CCO46_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11190;old_locus_tag=CCO46_11195 NZ_NPOH01000008.1 Protein Homology CDS 1502 3133 . - 0 ID=cds-WP_094964431.1;Parent=gene-CCO46_RS11190;Dbxref=GenBank:WP_094964431.1;Name=WP_094964431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=CCO46_RS11190;product=class I SAM-dependent methyltransferase;protein_id=WP_094964431.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 3138 3395 . - . ID=gene-CCO46_RS11195;Name=CCO46_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11195;old_locus_tag=CCO46_11200 NZ_NPOH01000008.1 Protein Homology CDS 3138 3395 . - 0 ID=cds-WP_001054380.1;Parent=gene-CCO46_RS11195;Dbxref=GenBank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=CCO46_RS11195;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 3883 4491 . + . ID=gene-CCO46_RS11205;Name=CCO46_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11205;old_locus_tag=CCO46_11210 NZ_NPOH01000008.1 Protein Homology CDS 3883 4491 . + 0 ID=cds-WP_001635352.1;Parent=gene-CCO46_RS11205;Dbxref=GenBank:WP_001635352.1;Name=WP_001635352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=CCO46_RS11205;product=DUF1062 domain-containing protein;protein_id=WP_001635352.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 4851 5762 . + . ID=gene-CCO46_RS11210;Name=CCO46_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11210;old_locus_tag=CCO46_11215 NZ_NPOH01000008.1 Protein Homology CDS 4851 5762 . + 0 ID=cds-WP_023203351.1;Parent=gene-CCO46_RS11210;Dbxref=GenBank:WP_023203351.1;Name=WP_023203351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=CCO46_RS11210;product=STM4504/CBY_0614 family protein;protein_id=WP_023203351.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 5967 6428 . + . ID=gene-CCO46_RS11215;Name=CCO46_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11215;old_locus_tag=CCO46_11220 NZ_NPOH01000008.1 Protein Homology CDS 5967 6428 . + 0 ID=cds-WP_039590221.1;Parent=gene-CCO46_RS11215;Dbxref=GenBank:WP_039590221.1;Name=WP_039590221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=CCO46_RS11215;product=DUF302 domain-containing protein;protein_id=WP_039590221.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 6425 7099 . - . ID=gene-CCO46_RS11220;Name=CCO46_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11220;old_locus_tag=CCO46_11225 NZ_NPOH01000008.1 Protein Homology CDS 6425 7099 . - 0 ID=cds-WP_097363332.1;Parent=gene-CCO46_RS11220;Dbxref=GenBank:WP_097363332.1;Name=WP_097363332.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=CCO46_RS11220;product=dienelactone hydrolase family protein;protein_id=WP_097363332.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 7449 8222 . + . ID=gene-CCO46_RS11230;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=CCO46_RS11230;old_locus_tag=CCO46_11235 NZ_NPOH01000008.1 Protein Homology CDS 7449 8222 . + 0 ID=cds-WP_000841654.1;Parent=gene-CCO46_RS11230;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=CCO46_RS11230;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 8223 9236 . - . ID=gene-CCO46_RS11235;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO46_RS11235;old_locus_tag=CCO46_11240 NZ_NPOH01000008.1 Protein Homology CDS 8223 9236 . - 0 ID=cds-WP_001094612.1;Parent=gene-CCO46_RS11235;Dbxref=GenBank:WP_001094612.1;Name=WP_001094612.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=CCO46_RS11235;product=tryptophan--tRNA ligase;protein_id=WP_001094612.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 9953 10483 . + . ID=gene-CCO46_RS11240;Name=CCO46_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11240;old_locus_tag=CCO46_11245 NZ_NPOH01000008.1 Protein Homology CDS 9953 10483 . + 0 ID=cds-WP_000907671.1;Parent=gene-CCO46_RS11240;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=CCO46_RS11240;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 10722 11456 . + . ID=gene-CCO46_RS11250;Name=CCO46_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11250;old_locus_tag=CCO46_11255 NZ_NPOH01000008.1 Protein Homology CDS 10722 11456 . + 0 ID=cds-WP_000683247.1;Parent=gene-CCO46_RS11250;Dbxref=GenBank:WP_000683247.1;Name=WP_000683247.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=CCO46_RS11250;product=aspartate/glutamate racemase family protein;protein_id=WP_000683247.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 11462 12370 . - . ID=gene-CCO46_RS11255;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=CCO46_RS11255;old_locus_tag=CCO46_11260 NZ_NPOH01000008.1 Protein Homology CDS 11462 12370 . - 0 ID=cds-WP_000383513.1;Parent=gene-CCO46_RS11255;Dbxref=GenBank:WP_000383513.1;Name=WP_000383513.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=CCO46_RS11255;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383513.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 12489 13661 . - . ID=gene-CCO46_RS11260;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=CCO46_RS11260;old_locus_tag=CCO46_11265 NZ_NPOH01000008.1 Protein Homology CDS 12489 13661 . - 0 ID=cds-WP_001113058.1;Parent=gene-CCO46_RS11260;Dbxref=GenBank:WP_001113058.1;Name=WP_001113058.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=CCO46_RS11260;product=beta-aspartyl-peptidase;protein_id=WP_001113058.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 13674 14135 . - . ID=gene-CCO46_RS11265;Name=CCO46_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11265;old_locus_tag=CCO46_11270 NZ_NPOH01000008.1 Protein Homology CDS 13674 14135 . - 0 ID=cds-WP_000211979.1;Parent=gene-CCO46_RS11265;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=CCO46_RS11265;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 14132 14803 . - . ID=gene-CCO46_RS11270;Name=CCO46_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11270;old_locus_tag=CCO46_11275 NZ_NPOH01000008.1 Protein Homology CDS 14132 14803 . - 0 ID=cds-WP_000068752.1;Parent=gene-CCO46_RS11270;Dbxref=GenBank:WP_000068752.1;Name=WP_000068752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=CCO46_RS11270;product=nucleoside recognition domain-containing protein;protein_id=WP_000068752.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 15675 16859 . - . ID=gene-CCO46_RS11275;Name=CCO46_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11275;old_locus_tag=CCO46_11280 NZ_NPOH01000008.1 Protein Homology CDS 15675 16859 . - 0 ID=cds-WP_000233263.1;Parent=gene-CCO46_RS11275;Dbxref=GenBank:WP_000233263.1;Name=WP_000233263.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=CCO46_RS11275;product=MFS transporter;protein_id=WP_000233263.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 17079 18350 . - . ID=gene-CCO46_RS11280;Name=CCO46_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11280;old_locus_tag=CCO46_11285 NZ_NPOH01000008.1 Protein Homology CDS 17079 18350 . - 0 ID=cds-WP_058331412.1;Parent=gene-CCO46_RS11280;Dbxref=GenBank:WP_058331412.1;Name=WP_058331412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=CCO46_RS11280;product=DUF445 domain-containing protein;protein_id=WP_058331412.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 18437 19678 . - . ID=gene-CCO46_RS11285;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=CCO46_RS11285;old_locus_tag=CCO46_11290 NZ_NPOH01000008.1 Protein Homology CDS 18437 19678 . - 0 ID=cds-WP_001188918.1;Parent=gene-CCO46_RS11285;Dbxref=GenBank:WP_001188918.1;Name=WP_001188918.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=CCO46_RS11285;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001188918.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 20157 21122 . + . ID=gene-CCO46_RS11290;Name=CCO46_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11290;old_locus_tag=CCO46_11295 NZ_NPOH01000008.1 Protein Homology CDS 20157 21122 . + 0 ID=cds-WP_000749992.1;Parent=gene-CCO46_RS11290;Dbxref=GenBank:WP_000749992.1;Name=WP_000749992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=CCO46_RS11290;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749992.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 21303 22673 . + . ID=gene-CCO46_RS11295;Name=CCO46_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11295;old_locus_tag=CCO46_11300 NZ_NPOH01000008.1 Protein Homology CDS 21303 22673 . + 0 ID=cds-WP_058331411.1;Parent=gene-CCO46_RS11295;Dbxref=GenBank:WP_058331411.1;Name=WP_058331411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=CCO46_RS11295;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_058331411.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 22768 22911 . - . ID=gene-CCO46_RS11300;Name=CCO46_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11300;old_locus_tag=CCO46_11305 NZ_NPOH01000008.1 Protein Homology CDS 22768 22911 . - 0 ID=cds-WP_001541460.1;Parent=gene-CCO46_RS11300;Dbxref=GenBank:WP_001541460.1;Name=WP_001541460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=CCO46_RS11300;product=hypothetical protein;protein_id=WP_001541460.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 22878 23042 . + . ID=gene-CCO46_RS11305;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=CCO46_RS11305;old_locus_tag=CCO46_11310 NZ_NPOH01000008.1 Protein Homology CDS 22878 23042 . + 0 ID=cds-WP_000397915.1;Parent=gene-CCO46_RS11305;Dbxref=GenBank:WP_000397915.1;Name=WP_000397915.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=CCO46_RS11305;product=DUF1127 domain-containing protein YjiS;protein_id=WP_000397915.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 23119 24039 . - . ID=gene-CCO46_RS11310;Name=CCO46_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11310;old_locus_tag=CCO46_11315 NZ_NPOH01000008.1 Protein Homology CDS 23119 24039 . - 0 ID=cds-WP_058331410.1;Parent=gene-CCO46_RS11310;Dbxref=GenBank:WP_058331410.1;Name=WP_058331410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=CCO46_RS11310;product=DUF5655 domain-containing protein;protein_id=WP_058331410.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 24450 25091 . - . ID=gene-CCO46_RS11315;Name=CCO46_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11315;old_locus_tag=CCO46_11320 NZ_NPOH01000008.1 Protein Homology CDS 24450 25091 . - 0 ID=cds-WP_058331409.1;Parent=gene-CCO46_RS11315;Dbxref=GenBank:WP_058331409.1;Name=WP_058331409.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727645.1;locus_tag=CCO46_RS11315;product=LysE family translocator;protein_id=WP_058331409.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 25139 25954 . - . ID=gene-CCO46_RS11320;Name=CCO46_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11320;old_locus_tag=CCO46_11325 NZ_NPOH01000008.1 Protein Homology CDS 25139 25954 . - 0 ID=cds-WP_058331408.1;Parent=gene-CCO46_RS11320;Dbxref=GenBank:WP_058331408.1;Name=WP_058331408.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001128428.1;locus_tag=CCO46_RS11320;product=AraC family transcriptional regulator;protein_id=WP_058331408.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 25992 26948 . - . ID=gene-CCO46_RS11325;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=CCO46_RS11325;old_locus_tag=CCO46_11330 NZ_NPOH01000008.1 Protein Homology CDS 25992 26948 . - 0 ID=cds-WP_000187838.1;Parent=gene-CCO46_RS11325;Dbxref=GenBank:WP_000187838.1;Name=WP_000187838.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=CCO46_RS11325;product=GTPase;protein_id=WP_000187838.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 26959 27162 . - . ID=gene-CCO46_RS11330;Name=CCO46_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11330;old_locus_tag=CCO46_11335 NZ_NPOH01000008.1 Protein Homology CDS 26959 27162 . - 0 ID=cds-WP_000460616.1;Parent=gene-CCO46_RS11330;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=CCO46_RS11330;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 27257 29407 . - . ID=gene-CCO46_RS11335;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=CCO46_RS11335;old_locus_tag=CCO46_11340 NZ_NPOH01000008.1 Protein Homology CDS 27257 29407 . - 0 ID=cds-WP_000379928.1;Parent=gene-CCO46_RS11335;Dbxref=GenBank:WP_000379928.1;Name=WP_000379928.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=CCO46_RS11335;product=pyruvate/proton symporter BtsT;protein_id=WP_000379928.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 29774 31435 . + . ID=gene-CCO46_RS11340;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=CCO46_RS11340;old_locus_tag=CCO46_11345 NZ_NPOH01000008.1 Protein Homology CDS 29774 31435 . + 0 ID=cds-WP_058331407.1;Parent=gene-CCO46_RS11340;Dbxref=GenBank:WP_058331407.1;Name=WP_058331407.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=CCO46_RS11340;product=methyl-accepting chemotaxis protein;protein_id=WP_058331407.1;transl_table=11 NZ_NPOH01000008.1 RefSeq pseudogene 31547 31621 . - . ID=gene-CCO46_RS25485;Name=CCO46_RS25485;end_range=31621,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25485;partial=true;pseudo=true NZ_NPOH01000008.1 Protein Homology CDS 31547 31621 . - 0 ID=cds-CCO46_RS25485;Parent=gene-CCO46_RS25485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=31621,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134222.1;locus_tag=CCO46_RS25485;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 31758 34523 . + . ID=gene-CCO46_RS11345;Name=CCO46_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11345;old_locus_tag=CCO46_11350 NZ_NPOH01000008.1 Protein Homology CDS 31758 34523 . + 0 ID=cds-WP_001224215.1;Parent=gene-CCO46_RS11345;Dbxref=GenBank:WP_001224215.1;Name=WP_001224215.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=CCO46_RS11345;product=sigma 54-interacting transcriptional regulator;protein_id=WP_001224215.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 34625 35047 . + . ID=gene-CCO46_RS11350;Name=CCO46_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11350;old_locus_tag=CCO46_11355 NZ_NPOH01000008.1 Protein Homology CDS 34625 35047 . + 0 ID=cds-WP_000820693.1;Parent=gene-CCO46_RS11350;Dbxref=GenBank:WP_000820693.1;Name=WP_000820693.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=CCO46_RS11350;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 35062 35523 . + . ID=gene-CCO46_RS11355;Name=CCO46_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11355;old_locus_tag=CCO46_11360 NZ_NPOH01000008.1 Protein Homology CDS 35062 35523 . + 0 ID=cds-WP_000634729.1;Parent=gene-CCO46_RS11355;Dbxref=GenBank:WP_000634729.1;Name=WP_000634729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=CCO46_RS11355;product=PTS sugar transporter subunit IIB;protein_id=WP_000634729.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 35549 36328 . + . ID=gene-CCO46_RS11360;Name=CCO46_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11360;old_locus_tag=CCO46_11365 NZ_NPOH01000008.1 Protein Homology CDS 35549 36328 . + 0 ID=cds-WP_000228866.1;Parent=gene-CCO46_RS11360;Dbxref=GenBank:WP_000228866.1;Name=WP_000228866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=CCO46_RS11360;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000228866.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 36306 37154 . + . ID=gene-CCO46_RS11365;Name=CCO46_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11365;old_locus_tag=CCO46_11370 NZ_NPOH01000008.1 Protein Homology CDS 36306 37154 . + 0 ID=cds-WP_000178062.1;Parent=gene-CCO46_RS11365;Dbxref=GenBank:WP_000178062.1;Name=WP_000178062.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=CCO46_RS11365;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178062.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 37167 38228 . + . ID=gene-CCO46_RS11370;Name=CCO46_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11370;old_locus_tag=CCO46_11375 NZ_NPOH01000008.1 Protein Homology CDS 37167 38228 . + 0 ID=cds-WP_000075428.1;Parent=gene-CCO46_RS11370;Dbxref=GenBank:WP_000075428.1;Name=WP_000075428.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=CCO46_RS11370;product=SIS domain-containing protein;protein_id=WP_000075428.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 38246 39256 . + . ID=gene-CCO46_RS11375;Name=CCO46_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11375;old_locus_tag=CCO46_11380 NZ_NPOH01000008.1 Protein Homology CDS 38246 39256 . + 0 ID=cds-WP_000900313.1;Parent=gene-CCO46_RS11375;Dbxref=GenBank:WP_000900313.1;Name=WP_000900313.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=CCO46_RS11375;product=SIS domain-containing protein;protein_id=WP_000900313.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 39390 41681 . - . ID=gene-CCO46_RS11380;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=CCO46_RS11380;old_locus_tag=CCO46_11385 NZ_NPOH01000008.1 Protein Homology CDS 39390 41681 . - 0 ID=cds-WP_058331406.1;Parent=gene-CCO46_RS11380;Dbxref=GenBank:WP_058331406.1;Name=WP_058331406.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465680.1;locus_tag=CCO46_RS11380;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_058331406.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 41964 42425 . - . ID=gene-CCO46_RS11385;Name=CCO46_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11385;old_locus_tag=CCO46_11390 NZ_NPOH01000008.1 Protein Homology CDS 41964 42425 . - 0 ID=cds-WP_001090314.1;Parent=gene-CCO46_RS11385;Dbxref=GenBank:WP_001090314.1;Name=WP_001090314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=CCO46_RS11385;product=DUF2501 domain-containing protein;protein_id=WP_001090314.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 42483 43220 . - . ID=gene-CCO46_RS11390;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=CCO46_RS11390;old_locus_tag=CCO46_11395 NZ_NPOH01000008.1 Protein Homology CDS 42483 43220 . - 0 ID=cds-WP_000799924.1;Parent=gene-CCO46_RS11390;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=CCO46_RS11390;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 43223 43762 . - . ID=gene-CCO46_RS11395;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=CCO46_RS11395;old_locus_tag=CCO46_11400 NZ_NPOH01000008.1 Protein Homology CDS 43223 43762 . - 0 ID=cds-WP_000098573.1;Parent=gene-CCO46_RS11395;Dbxref=GenBank:WP_000098573.1;Name=WP_000098573.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=CCO46_RS11395;product=primosomal protein DnaT;protein_id=WP_000098573.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 43855 44328 . - . ID=gene-CCO46_RS11400;Name=CCO46_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11400;old_locus_tag=CCO46_11405 NZ_NPOH01000008.1 Protein Homology CDS 43855 44328 . - 0 ID=cds-WP_000511329.1;Parent=gene-CCO46_RS11400;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=CCO46_RS11400;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 44319 45095 . - . ID=gene-CCO46_RS11405;Name=CCO46_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11405;old_locus_tag=CCO46_11410 NZ_NPOH01000008.1 Protein Homology CDS 44319 45095 . - 0 ID=cds-WP_001747536.1;Parent=gene-CCO46_RS11405;Dbxref=GenBank:WP_001747536.1;Name=WP_001747536.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=CCO46_RS11405;product=threonine/serine ThrE exporter family protein;protein_id=WP_001747536.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 45808 46533 . + . ID=gene-CCO46_RS11410;Name=CCO46_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11410;old_locus_tag=CCO46_11415 NZ_NPOH01000008.1 Protein Homology CDS 45808 46533 . + 0 ID=cds-WP_000936661.1;Parent=gene-CCO46_RS11410;Dbxref=GenBank:WP_000936661.1;Name=WP_000936661.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=CCO46_RS11410;product=helix-turn-helix transcriptional regulator;protein_id=WP_000936661.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 46494 47168 . + . ID=gene-CCO46_RS11415;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=CCO46_RS11415;old_locus_tag=CCO46_11420 NZ_NPOH01000008.1 Protein Homology CDS 46494 47168 . + 0 ID=cds-WP_000431547.1;Parent=gene-CCO46_RS11415;Dbxref=GenBank:WP_000431547.1;Name=WP_000431547.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=CCO46_RS11415;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431547.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 47219 47677 . - . ID=gene-CCO46_RS11420;Name=CCO46_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11420;old_locus_tag=CCO46_11425 NZ_NPOH01000008.1 Protein Homology CDS 47219 47677 . - 0 ID=cds-WP_000058276.1;Parent=gene-CCO46_RS11420;Dbxref=GenBank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=CCO46_RS11420;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 47828 48616 . - . ID=gene-CCO46_RS11425;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=CCO46_RS11425;old_locus_tag=CCO46_11430 NZ_NPOH01000008.1 Protein Homology CDS 47828 48616 . - 0 ID=cds-WP_097363333.1;Parent=gene-CCO46_RS11425;Dbxref=GenBank:WP_097363333.1;Name=WP_097363333.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=CCO46_RS11425;product=siderophore-iron reductase FhuF;protein_id=WP_097363333.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 48737 49801 . - . ID=gene-CCO46_RS11430;Name=CCO46_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11430;old_locus_tag=CCO46_11435 NZ_NPOH01000008.1 Protein Homology CDS 48737 49801 . - 0 ID=cds-WP_097363334.1;Parent=gene-CCO46_RS11430;Dbxref=GenBank:WP_097363334.1;Name=WP_097363334.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=CCO46_RS11430;product=GGDEF domain-containing protein;protein_id=WP_097363334.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 50052 50288 . + . ID=gene-CCO46_RS11435;Name=CCO46_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11435;old_locus_tag=CCO46_11440 NZ_NPOH01000008.1 Protein Homology CDS 50052 50288 . + 0 ID=cds-WP_000941879.1;Parent=gene-CCO46_RS11435;Dbxref=GenBank:WP_000941879.1;Name=WP_000941879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=CCO46_RS11435;product=DUF1435 domain-containing protein;protein_id=WP_000941879.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 50320 50406 . - . ID=gene-CCO46_RS11440;Name=CCO46_RS11440;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS11440;old_locus_tag=CCO46_11445 NZ_NPOH01000008.1 tRNAscan-SE tRNA 50320 50406 . - . ID=rna-CCO46_RS11440;Parent=gene-CCO46_RS11440;anticodon=(pos:complement(50370..50372));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11440;product=tRNA-Leu NZ_NPOH01000008.1 tRNAscan-SE exon 50320 50406 . - . ID=exon-CCO46_RS11440-1;Parent=rna-CCO46_RS11440;anticodon=(pos:complement(50370..50372));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11440;product=tRNA-Leu NZ_NPOH01000008.1 RefSeq gene 50438 50524 . - . ID=gene-CCO46_RS11445;Name=CCO46_RS11445;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS11445;old_locus_tag=CCO46_11450 NZ_NPOH01000008.1 tRNAscan-SE tRNA 50438 50524 . - . ID=rna-CCO46_RS11445;Parent=gene-CCO46_RS11445;anticodon=(pos:complement(50488..50490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11445;product=tRNA-Leu NZ_NPOH01000008.1 tRNAscan-SE exon 50438 50524 . - . ID=exon-CCO46_RS11445-1;Parent=rna-CCO46_RS11445;anticodon=(pos:complement(50488..50490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11445;product=tRNA-Leu NZ_NPOH01000008.1 RefSeq gene 50552 50638 . - . ID=gene-CCO46_RS11450;Name=CCO46_RS11450;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS11450;old_locus_tag=CCO46_11455 NZ_NPOH01000008.1 tRNAscan-SE tRNA 50552 50638 . - . ID=rna-CCO46_RS11450;Parent=gene-CCO46_RS11450;anticodon=(pos:complement(50602..50604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11450;product=tRNA-Leu NZ_NPOH01000008.1 tRNAscan-SE exon 50552 50638 . - . ID=exon-CCO46_RS11450-1;Parent=rna-CCO46_RS11450;anticodon=(pos:complement(50602..50604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS11450;product=tRNA-Leu NZ_NPOH01000008.1 RefSeq gene 50829 51857 . - . ID=gene-CCO46_RS11455;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=CCO46_RS11455;old_locus_tag=CCO46_11460 NZ_NPOH01000008.1 Protein Homology CDS 50829 51857 . - 0 ID=cds-WP_001272293.1;Parent=gene-CCO46_RS11455;Dbxref=GenBank:WP_001272293.1;Name=WP_001272293.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=CCO46_RS11455;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272293.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 51960 52397 . + . ID=gene-CCO46_RS11460;Name=CCO46_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11460;old_locus_tag=CCO46_11465 NZ_NPOH01000008.1 Protein Homology CDS 51960 52397 . + 0 ID=cds-WP_000203996.1;Parent=gene-CCO46_RS11460;Dbxref=GenBank:WP_000203996.1;Name=WP_000203996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=CCO46_RS11460;product=DNA polymerase III subunit psi;protein_id=WP_000203996.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 52342 52788 . + . ID=gene-CCO46_RS11465;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CCO46_RS11465;old_locus_tag=CCO46_11470 NZ_NPOH01000008.1 Protein Homology CDS 52342 52788 . + 0 ID=cds-WP_001092435.1;Parent=gene-CCO46_RS11465;Dbxref=GenBank:WP_001092435.1;Name=WP_001092435.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=CCO46_RS11465;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092435.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 52810 53487 . + . ID=gene-CCO46_RS11470;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=CCO46_RS11470;old_locus_tag=CCO46_11475 NZ_NPOH01000008.1 Protein Homology CDS 52810 53487 . + 0 ID=cds-WP_001651448.1;Parent=gene-CCO46_RS11470;Dbxref=GenBank:WP_001651448.1;Name=WP_001651448.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=CCO46_RS11470;product=pyrimidine 5'-nucleotidase;protein_id=WP_001651448.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 53579 55168 . + . ID=gene-CCO46_RS11475;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=CCO46_RS11475;old_locus_tag=CCO46_11480 NZ_NPOH01000008.1 Protein Homology CDS 53579 55168 . + 0 ID=cds-WP_000175965.1;Parent=gene-CCO46_RS11475;Dbxref=GenBank:WP_000175965.1;Name=WP_000175965.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=CCO46_RS11475;product=peptide chain release factor 3;protein_id=WP_000175965.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 55570 56187 . + . ID=gene-CCO46_RS11480;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO46_RS11480;old_locus_tag=CCO46_11485 NZ_NPOH01000008.1 Protein Homology CDS 55570 56187 . + 0 ID=cds-WP_000178963.1;Parent=gene-CCO46_RS11480;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=CCO46_RS11480;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 56316 56477 . + . ID=gene-CCO46_RS11485;Name=CCO46_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11485;old_locus_tag=CCO46_11490 NZ_NPOH01000008.1 Protein Homology CDS 56316 56477 . + 0 ID=cds-WP_000490276.1;Parent=gene-CCO46_RS11485;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=CCO46_RS11485;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 56601 57674 . + . ID=gene-CCO46_RS11490;Name=CCO46_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11490;old_locus_tag=CCO46_11495 NZ_NPOH01000008.1 Protein Homology CDS 56601 57674 . + 0 ID=cds-WP_097363335.1;Parent=gene-CCO46_RS11490;Dbxref=GenBank:WP_097363335.1;Name=WP_097363335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=CCO46_RS11490;product=patatin-like phospholipase family protein;protein_id=WP_097363335.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 57671 58444 . + . ID=gene-CCO46_RS11495;Name=CCO46_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11495;old_locus_tag=CCO46_11500 NZ_NPOH01000008.1 Protein Homology CDS 57671 58444 . + 0 ID=cds-WP_097363336.1;Parent=gene-CCO46_RS11495;Dbxref=GenBank:WP_097363336.1;Name=WP_097363336.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=CCO46_RS11495;product=metal-dependent hydrolase;protein_id=WP_097363336.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 58477 59340 . - . ID=gene-CCO46_RS11500;Name=CCO46_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11500;old_locus_tag=CCO46_11505 NZ_NPOH01000008.1 Protein Homology CDS 58477 59340 . - 0 ID=cds-WP_058331400.1;Parent=gene-CCO46_RS11500;Dbxref=GenBank:WP_058331400.1;Name=WP_058331400.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=CCO46_RS11500;product=YjjW family glycine radical enzyme activase;protein_id=WP_058331400.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 59312 60862 . - . ID=gene-CCO46_RS11505;Name=CCO46_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11505;old_locus_tag=CCO46_11510 NZ_NPOH01000008.1 Protein Homology CDS 59312 60862 . - 0 ID=cds-WP_001111673.1;Parent=gene-CCO46_RS11505;Dbxref=GenBank:WP_001111673.1;Name=WP_001111673.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=CCO46_RS11505;product=YjjI family glycine radical enzyme;protein_id=WP_001111673.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 61122 61901 . + . ID=gene-CCO46_RS11510;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CCO46_RS11510;old_locus_tag=CCO46_11515 NZ_NPOH01000008.1 Protein Homology CDS 61122 61901 . + 0 ID=cds-WP_001519713.1;Parent=gene-CCO46_RS11510;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=CCO46_RS11510;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 62025 63347 . + . ID=gene-CCO46_RS11515;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=CCO46_RS11515;old_locus_tag=CCO46_11520 NZ_NPOH01000008.1 Protein Homology CDS 62025 63347 . + 0 ID=cds-WP_000477838.1;Parent=gene-CCO46_RS11515;Dbxref=GenBank:WP_000477838.1;Name=WP_000477838.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=CCO46_RS11515;product=thymidine phosphorylase;protein_id=WP_000477838.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 63399 64622 . + . ID=gene-CCO46_RS11520;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CCO46_RS11520;old_locus_tag=CCO46_11525 NZ_NPOH01000008.1 Protein Homology CDS 63399 64622 . + 0 ID=cds-WP_000816454.1;Parent=gene-CCO46_RS11520;Dbxref=GenBank:WP_000816454.1;Name=WP_000816454.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=CCO46_RS11520;product=phosphopentomutase;protein_id=WP_000816454.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 64735 65454 . + . ID=gene-CCO46_RS11525;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CCO46_RS11525;old_locus_tag=CCO46_11530 NZ_NPOH01000008.1 Protein Homology CDS 64735 65454 . + 0 ID=cds-WP_000224864.1;Parent=gene-CCO46_RS11525;Dbxref=GenBank:WP_000224864.1;Name=WP_000224864.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=CCO46_RS11525;product=purine-nucleoside phosphorylase;protein_id=WP_000224864.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 65633 66961 . + . ID=gene-CCO46_RS11530;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=protein_coding;locus_tag=CCO46_RS11530;old_locus_tag=CCO46_11535 NZ_NPOH01000008.1 Protein Homology CDS 65633 66961 . + 0 ID=cds-WP_001534747.1;Parent=gene-CCO46_RS11530;Dbxref=GenBank:WP_001534747.1;Name=WP_001534747.1;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747246.1;locus_tag=CCO46_RS11530;product=type II toxin-antitoxin system HipA family toxin YjjJ;protein_id=WP_001534747.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 66966 67982 . - . ID=gene-CCO46_RS11535;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=CCO46_RS11535;old_locus_tag=CCO46_11540 NZ_NPOH01000008.1 Protein Homology CDS 66966 67982 . - 0 ID=cds-WP_000209763.1;Parent=gene-CCO46_RS11535;Dbxref=GenBank:WP_000209763.1;Name=WP_000209763.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=CCO46_RS11535;product=lipoate--protein ligase LplA;protein_id=WP_000209763.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 68016 68660 . - . ID=gene-CCO46_RS11540;Name=CCO46_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11540;old_locus_tag=CCO46_11545 NZ_NPOH01000008.1 Protein Homology CDS 68016 68660 . - 0 ID=cds-WP_000090067.1;Parent=gene-CCO46_RS11540;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=CCO46_RS11540;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 68777 69745 . + . ID=gene-CCO46_RS11550;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO46_RS11550;old_locus_tag=CCO46_11555 NZ_NPOH01000008.1 Protein Homology CDS 68777 69745 . + 0 ID=cds-WP_001132983.1;Parent=gene-CCO46_RS11550;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=CCO46_RS11550;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 69829 71211 . + . ID=gene-CCO46_RS11555;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CCO46_RS11555;old_locus_tag=CCO46_11560 NZ_NPOH01000008.1 Protein Homology CDS 69829 71211 . + 0 ID=cds-WP_001029710.1;Parent=gene-CCO46_RS11555;Dbxref=GenBank:WP_001029710.1;Name=WP_001029710.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=CCO46_RS11555;product=DNA repair protein RadA;protein_id=WP_001029710.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 71362 72594 . + . ID=gene-CCO46_RS11560;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=CCO46_RS11560;old_locus_tag=CCO46_11565 NZ_NPOH01000008.1 Protein Homology CDS 71362 72594 . + 0 ID=cds-WP_000093829.1;Parent=gene-CCO46_RS11560;Dbxref=GenBank:WP_000093829.1;Name=WP_000093829.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=CCO46_RS11560;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093829.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 72712 74379 . - . ID=gene-CCO46_RS11565;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=CCO46_RS11565;old_locus_tag=CCO46_11570 NZ_NPOH01000008.1 Protein Homology CDS 72712 74379 . - 0 ID=cds-WP_000046770.1;Parent=gene-CCO46_RS11565;Dbxref=GenBank:WP_000046770.1;Name=WP_000046770.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=CCO46_RS11565;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046770.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 74588 76525 . + . ID=gene-CCO46_RS11575;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=CCO46_RS11575;old_locus_tag=CCO46_11580 NZ_NPOH01000008.1 Protein Homology CDS 74588 76525 . + 0 ID=cds-WP_097363337.1;Parent=gene-CCO46_RS11575;Dbxref=GenBank:WP_097363337.1;Name=WP_097363337.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=CCO46_RS11575;product=murein transglycosylase;protein_id=WP_097363337.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 76583 76909 . + . ID=gene-CCO46_RS11580;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=CCO46_RS11580;old_locus_tag=CCO46_11585 NZ_NPOH01000008.1 Protein Homology CDS 76583 76909 . + 0 ID=cds-WP_000192005.1;Parent=gene-CCO46_RS11580;Dbxref=GenBank:WP_000192005.1;Name=WP_000192005.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=CCO46_RS11580;product=trp operon repressor;protein_id=WP_000192005.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 77011 77526 . - . ID=gene-CCO46_RS11585;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=CCO46_RS11585;old_locus_tag=CCO46_11590 NZ_NPOH01000008.1 Protein Homology CDS 77011 77526 . - 0 ID=cds-WP_000554310.1;Parent=gene-CCO46_RS11585;Dbxref=GenBank:WP_000554310.1;Name=WP_000554310.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=CCO46_RS11585;product=inosine/xanthosine triphosphatase;protein_id=WP_000554310.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 77575 78222 . + . ID=gene-CCO46_RS11590;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=CCO46_RS11590;old_locus_tag=CCO46_11595 NZ_NPOH01000008.1 Protein Homology CDS 77575 78222 . + 0 ID=cds-WP_000942363.1;Parent=gene-CCO46_RS11590;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=CCO46_RS11590;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 78219 79088 . - . ID=gene-CCO46_RS11595;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=CCO46_RS11595;old_locus_tag=CCO46_11600 NZ_NPOH01000008.1 Protein Homology CDS 78219 79088 . - 0 ID=cds-WP_000371685.1;Parent=gene-CCO46_RS11595;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=CCO46_RS11595;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 79300 79773 . + . ID=gene-CCO46_RS11600;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=CCO46_RS11600;old_locus_tag=CCO46_11605 NZ_NPOH01000008.1 Protein Homology CDS 79300 79773 . + 0 ID=cds-WP_000875811.1;Parent=gene-CCO46_RS11600;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=CCO46_RS11600;product=protein CreA;protein_id=WP_000875811.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 79786 80475 . + . ID=gene-CCO46_RS11605;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=CCO46_RS11605;old_locus_tag=CCO46_11610 NZ_NPOH01000008.1 Protein Homology CDS 79786 80475 . + 0 ID=cds-WP_001187049.1;Parent=gene-CCO46_RS11605;Dbxref=GenBank:WP_001187049.1;Name=WP_001187049.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=CCO46_RS11605;product=two-component system response regulator CreB;protein_id=WP_001187049.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 80475 81899 . + . ID=gene-CCO46_RS11610;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=CCO46_RS11610;old_locus_tag=CCO46_11615 NZ_NPOH01000008.1 Protein Homology CDS 80475 81899 . + 0 ID=cds-WP_001728172.1;Parent=gene-CCO46_RS11610;Dbxref=GenBank:WP_001728172.1;Name=WP_001728172.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=CCO46_RS11610;product=two-component system sensor histidine kinase CreC;protein_id=WP_001728172.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 81957 83306 . + . ID=gene-CCO46_RS11615;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=CCO46_RS11615;old_locus_tag=CCO46_11620 NZ_NPOH01000008.1 Protein Homology CDS 81957 83306 . + 0 ID=cds-WP_094964437.1;Parent=gene-CCO46_RS11615;Dbxref=GenBank:WP_094964437.1;Name=WP_094964437.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=CCO46_RS11615;product=cell envelope integrity protein CreD;protein_id=WP_094964437.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 83364 84449 . - . ID=gene-CCO46_RS11620;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=CCO46_RS11620;old_locus_tag=CCO46_11625 NZ_NPOH01000008.1 Protein Homology CDS 83364 84449 . - 0 ID=cds-WP_058331396.1;Parent=gene-CCO46_RS11620;Dbxref=GenBank:WP_058331396.1;Name=WP_058331396.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=CCO46_RS11620;product=fimbrial major subunit SthE;protein_id=WP_058331396.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 84490 85047 . - . ID=gene-CCO46_RS11625;Name=CCO46_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11625;old_locus_tag=CCO46_11630 NZ_NPOH01000008.1 Protein Homology CDS 84490 85047 . - 0 ID=cds-WP_058331395.1;Parent=gene-CCO46_RS11625;Dbxref=GenBank:WP_058331395.1;Name=WP_058331395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=CCO46_RS11625;product=fimbrial protein;protein_id=WP_058331395.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 85065 87602 . - . ID=gene-CCO46_RS11630;Name=CCO46_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11630;old_locus_tag=CCO46_11635 NZ_NPOH01000008.1 Protein Homology CDS 85065 87602 . - 0 ID=cds-WP_001160707.1;Parent=gene-CCO46_RS11630;Dbxref=GenBank:WP_001160707.1;Name=WP_001160707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=CCO46_RS11630;product=fimbrial outer membrane usher protein;protein_id=WP_001160707.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 87648 88331 . - . ID=gene-CCO46_RS11635;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO46_RS11635;old_locus_tag=CCO46_11640 NZ_NPOH01000008.1 Protein Homology CDS 87648 88331 . - 0 ID=cds-WP_000680522.1;Parent=gene-CCO46_RS11635;Dbxref=GenBank:WP_000680522.1;Name=WP_000680522.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=CCO46_RS11635;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680522.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 88402 88947 . - . ID=gene-CCO46_RS11640;Name=CCO46_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11640;old_locus_tag=CCO46_11645 NZ_NPOH01000008.1 Protein Homology CDS 88402 88947 . - 0 ID=cds-WP_000482231.1;Parent=gene-CCO46_RS11640;Dbxref=GenBank:WP_000482231.1;Name=WP_000482231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=CCO46_RS11640;product=fimbrial protein;protein_id=WP_000482231.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 89286 89957 . - . ID=gene-CCO46_RS11645;Name=CCO46_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11645;old_locus_tag=CCO46_11650 NZ_NPOH01000008.1 Protein Homology CDS 89286 89957 . - 0 ID=cds-WP_000811635.1;Parent=gene-CCO46_RS11645;Dbxref=GenBank:WP_000811635.1;Name=WP_000811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=CCO46_RS11645;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811635.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 90341 90655 . - . ID=gene-CCO46_RS11650;Name=CCO46_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11650;old_locus_tag=CCO46_11655 NZ_NPOH01000008.1 Protein Homology CDS 90341 90655 . - 0 ID=cds-WP_000749515.1;Parent=gene-CCO46_RS11650;Dbxref=GenBank:WP_000749515.1;Name=WP_000749515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=CCO46_RS11650;product=hypothetical protein;protein_id=WP_000749515.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 90922 91638 . - . ID=gene-CCO46_RS11655;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO46_RS11655;old_locus_tag=CCO46_11660 NZ_NPOH01000008.1 Protein Homology CDS 90922 91638 . - 0 ID=cds-WP_001194359.1;Parent=gene-CCO46_RS11655;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=CCO46_RS11655;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 91734 91874 . + . ID=gene-CCO46_RS11660;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=CCO46_RS11660;old_locus_tag=CCO46_11665 NZ_NPOH01000008.1 Protein Homology CDS 91734 91874 . + 0 ID=cds-WP_001541509.1;Parent=gene-CCO46_RS11660;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=CCO46_RS11660;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 92274 92960 . + . ID=gene-CCO46_RS11665;Name=CCO46_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11665;old_locus_tag=CCO46_11670 NZ_NPOH01000008.1 Protein Homology CDS 92274 92960 . + 0 ID=cds-WP_058331393.1;Parent=gene-CCO46_RS11665;Dbxref=GenBank:WP_058331393.1;Name=WP_058331393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=CCO46_RS11665;product=tRNA/rRNA methyltransferase;protein_id=WP_058331393.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 93174 93239 . + . ID=gene-CCO46_RS11670;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=CCO46_RS11670;old_locus_tag=CCO46_11675 NZ_NPOH01000008.1 Protein Homology CDS 93174 93239 . + 0 ID=cds-WP_001575544.1;Parent=gene-CCO46_RS11670;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=CCO46_RS11670;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11 NZ_NPOH01000008.1 cmsearch sequence_feature 93175 93295 . + . ID=id-NZ_NPOH01000008.1:93175..93295;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPOH01000008.1 RefSeq gene 93321 95783 . + . ID=gene-CCO46_RS11675;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=CCO46_RS11675;old_locus_tag=CCO46_11680 NZ_NPOH01000008.1 Protein Homology CDS 93321 95783 . + 0 ID=cds-WP_001264677.1;Parent=gene-CCO46_RS11675;Dbxref=GenBank:WP_001264677.1;Name=WP_001264677.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=CCO46_RS11675;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264677.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 95785 96714 . + . ID=gene-CCO46_RS11680;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CCO46_RS11680;old_locus_tag=CCO46_11685 NZ_NPOH01000008.1 Protein Homology CDS 95785 96714 . + 0 ID=cds-WP_000241685.1;Parent=gene-CCO46_RS11680;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=CCO46_RS11680;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 96718 98004 . + . ID=gene-CCO46_RS11685;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CCO46_RS11685;old_locus_tag=CCO46_11690 NZ_NPOH01000008.1 Protein Homology CDS 96718 98004 . + 0 ID=cds-WP_000781110.1;Parent=gene-CCO46_RS11685;Dbxref=GenBank:WP_000781110.1;Name=WP_000781110.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=CCO46_RS11685;product=threonine synthase;protein_id=WP_000781110.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 98098 98871 . - . ID=gene-CCO46_RS11690;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=CCO46_RS11690;old_locus_tag=CCO46_11695 NZ_NPOH01000008.1 Protein Homology CDS 98098 98871 . - 0 ID=cds-WP_024797404.1;Parent=gene-CCO46_RS11690;Dbxref=GenBank:WP_024797404.1;Name=WP_024797404.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=CCO46_RS11690;product=peroxide stress protein YaaA;protein_id=WP_024797404.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 98950 100380 . - . ID=gene-CCO46_RS11695;Name=CCO46_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11695;old_locus_tag=CCO46_11700 NZ_NPOH01000008.1 Protein Homology CDS 98950 100380 . - 0 ID=cds-WP_001113802.1;Parent=gene-CCO46_RS11695;Dbxref=GenBank:WP_001113802.1;Name=WP_001113802.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=CCO46_RS11695;product=alanine/glycine:cation symporter family protein;protein_id=WP_001113802.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 100649 101602 . + . ID=gene-CCO46_RS11700;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO46_RS11700;old_locus_tag=CCO46_11705 NZ_NPOH01000008.1 Protein Homology CDS 100649 101602 . + 0 ID=cds-WP_000130175.1;Parent=gene-CCO46_RS11700;Dbxref=GenBank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=CCO46_RS11700;product=transaldolase;protein_id=WP_000130175.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 101713 102303 . + . ID=gene-CCO46_RS11705;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=CCO46_RS11705;old_locus_tag=CCO46_11710 NZ_NPOH01000008.1 Protein Homology CDS 101713 102303 . + 0 ID=cds-WP_000380373.1;Parent=gene-CCO46_RS11705;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=CCO46_RS11705;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 102360 102926 . - . ID=gene-CCO46_RS11710;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=CCO46_RS11710;old_locus_tag=CCO46_11715 NZ_NPOH01000008.1 Protein Homology CDS 102360 102926 . - 0 ID=cds-WP_000528525.1;Parent=gene-CCO46_RS11710;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=CCO46_RS11710;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 103076 103789 . - . ID=gene-CCO46_RS11715;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=CCO46_RS11715;old_locus_tag=CCO46_11720 NZ_NPOH01000008.1 Protein Homology CDS 103076 103789 . - 0 ID=cds-WP_001103477.1;Parent=gene-CCO46_RS11715;Dbxref=GenBank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=CCO46_RS11715;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 103825 104229 . - . ID=gene-CCO46_RS11720;Name=CCO46_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11720;old_locus_tag=CCO46_11725 NZ_NPOH01000008.1 Protein Homology CDS 103825 104229 . - 0 ID=cds-WP_058331391.1;Parent=gene-CCO46_RS11720;Dbxref=GenBank:WP_058331391.1;Name=WP_058331391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=CCO46_RS11720;product=DUF2541 family protein;protein_id=WP_058331391.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 104578 106494 . + . ID=gene-CCO46_RS11725;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CCO46_RS11725;old_locus_tag=CCO46_11730 NZ_NPOH01000008.1 Protein Homology CDS 104578 106494 . + 0 ID=cds-WP_000516126.1;Parent=gene-CCO46_RS11725;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=CCO46_RS11725;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 106580 107719 . + . ID=gene-CCO46_RS11730;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CCO46_RS11730;old_locus_tag=CCO46_11735 NZ_NPOH01000008.1 Protein Homology CDS 106580 107719 . + 0 ID=cds-WP_001119009.1;Parent=gene-CCO46_RS11730;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=CCO46_RS11730;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 108000 108947 . + . ID=gene-CCO46_RS11735;Name=CCO46_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11735;old_locus_tag=CCO46_11740 NZ_NPOH01000008.1 Protein Homology CDS 108000 108947 . + 0 ID=cds-WP_000534911.1;Parent=gene-CCO46_RS11735;Dbxref=GenBank:WP_000534911.1;Name=WP_000534911.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=CCO46_RS11735;product=LysR family transcriptional regulator;protein_id=WP_000534911.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 109074 109418 . + . ID=gene-CCO46_RS11740;Name=CCO46_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11740;old_locus_tag=CCO46_11745 NZ_NPOH01000008.1 Protein Homology CDS 109074 109418 . + 0 ID=cds-WP_000026889.1;Parent=gene-CCO46_RS11740;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=CCO46_RS11740;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 109479 110012 . - . ID=gene-CCO46_RS11745;Name=CCO46_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11745;old_locus_tag=CCO46_11750 NZ_NPOH01000008.1 Protein Homology CDS 109479 110012 . - 0 ID=cds-WP_001068132.1;Parent=gene-CCO46_RS11745;Dbxref=GenBank:WP_001068132.1;Name=WP_001068132.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=CCO46_RS11745;product=glycoside hydrolase family 108 protein;protein_id=WP_001068132.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 110029 110472 . - . ID=gene-CCO46_RS11750;Name=CCO46_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11750;old_locus_tag=CCO46_11755 NZ_NPOH01000008.1 Protein Homology CDS 110029 110472 . - 0 ID=cds-WP_000860681.1;Parent=gene-CCO46_RS11750;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=CCO46_RS11750;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 110853 112964 . + . ID=gene-CCO46_RS11755;Name=CCO46_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11755;old_locus_tag=CCO46_11760 NZ_NPOH01000008.1 Protein Homology CDS 110853 112964 . + 0 ID=cds-WP_000235806.1;Parent=gene-CCO46_RS11755;Dbxref=GenBank:WP_000235806.1;Name=WP_000235806.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=CCO46_RS11755;product=glycosyl hydrolase family 18 protein;protein_id=WP_000235806.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 113057 116053 . + . ID=gene-CCO46_RS11760;Name=CCO46_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11760;old_locus_tag=CCO46_11765 NZ_NPOH01000008.1 Protein Homology CDS 113057 116053 . + 0 ID=cds-WP_000155805.1;Parent=gene-CCO46_RS11760;Dbxref=GenBank:WP_000155805.1;Name=WP_000155805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=CCO46_RS11760;product=hypothetical protein;protein_id=WP_000155805.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 116344 117039 . + . ID=gene-CCO46_RS11765;Name=CCO46_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11765;old_locus_tag=CCO46_11770 NZ_NPOH01000008.1 Protein Homology CDS 116344 117039 . + 0 ID=cds-WP_000980522.1;Parent=gene-CCO46_RS11765;Dbxref=GenBank:WP_000980522.1;Name=WP_000980522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527260.1;locus_tag=CCO46_RS11765;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000980522.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 117469 118011 . + . ID=gene-CCO46_RS11770;Name=CCO46_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11770;old_locus_tag=CCO46_11775 NZ_NPOH01000008.1 Protein Homology CDS 117469 118011 . + 0 ID=cds-WP_000743357.1;Parent=gene-CCO46_RS11770;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=CCO46_RS11770;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 118112 118798 . + . ID=gene-CCO46_RS11775;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=CCO46_RS11775;old_locus_tag=CCO46_11780 NZ_NPOH01000008.1 Protein Homology CDS 118112 118798 . + 0 ID=cds-WP_000742551.1;Parent=gene-CCO46_RS11775;Dbxref=GenBank:WP_000742551.1;Name=WP_000742551.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=CCO46_RS11775;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000742551.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 118803 121424 . + . ID=gene-CCO46_RS11780;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=CCO46_RS11780;old_locus_tag=CCO46_11785 NZ_NPOH01000008.1 Protein Homology CDS 118803 121424 . + 0 ID=cds-WP_094882376.1;Parent=gene-CCO46_RS11780;Dbxref=GenBank:WP_094882376.1;Name=WP_094882376.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=CCO46_RS11780;product=fimbrial usher BcfC;protein_id=WP_094882376.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 121425 122432 . + . ID=gene-CCO46_RS11785;Name=CCO46_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11785;old_locus_tag=CCO46_11790 NZ_NPOH01000008.1 Protein Homology CDS 121425 122432 . + 0 ID=cds-WP_058331390.1;Parent=gene-CCO46_RS11785;Dbxref=GenBank:WP_058331390.1;Name=WP_058331390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=CCO46_RS11785;product=fimbrial protein BcfD;protein_id=WP_058331390.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 122433 122978 . + . ID=gene-CCO46_RS11790;Name=CCO46_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11790;old_locus_tag=CCO46_11795 NZ_NPOH01000008.1 Protein Homology CDS 122433 122978 . + 0 ID=cds-WP_001082038.1;Parent=gene-CCO46_RS11790;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=CCO46_RS11790;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 122994 123512 . + . ID=gene-CCO46_RS11795;Name=CCO46_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11795;old_locus_tag=CCO46_11800 NZ_NPOH01000008.1 Protein Homology CDS 122994 123512 . + 0 ID=cds-WP_001243233.1;Parent=gene-CCO46_RS11795;Dbxref=GenBank:WP_001243233.1;Name=WP_001243233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=CCO46_RS11795;product=fimbrial protein BcfF;protein_id=WP_001243233.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 123478 124209 . + . ID=gene-CCO46_RS11800;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=CCO46_RS11800;old_locus_tag=CCO46_11805 NZ_NPOH01000008.1 Protein Homology CDS 123478 124209 . + 0 ID=cds-WP_094964442.1;Parent=gene-CCO46_RS11800;Dbxref=GenBank:WP_094964442.1;Name=WP_094964442.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=CCO46_RS11800;product=fimbrial chaperone BcfG;protein_id=WP_094964442.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 124274 125119 . + . ID=gene-CCO46_RS11805;Name=CCO46_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11805;old_locus_tag=CCO46_11810 NZ_NPOH01000008.1 Protein Homology CDS 124274 125119 . + 0 ID=cds-WP_000291393.1;Parent=gene-CCO46_RS11805;Dbxref=GenBank:WP_000291393.1;Name=WP_000291393.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=CCO46_RS11805;product=DsbA family protein;protein_id=WP_000291393.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 125158 125445 . + . ID=gene-CCO46_RS11810;Name=CCO46_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11810;old_locus_tag=CCO46_11815 NZ_NPOH01000008.1 Protein Homology CDS 125158 125445 . + 0 ID=cds-WP_000839831.1;Parent=gene-CCO46_RS11810;Dbxref=GenBank:WP_000839831.1;Name=WP_000839831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=CCO46_RS11810;product=hypothetical protein;protein_id=WP_000839831.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 125545 125994 . - . ID=gene-CCO46_RS11815;Name=CCO46_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11815;old_locus_tag=CCO46_11820 NZ_NPOH01000008.1 Protein Homology CDS 125545 125994 . - 0 ID=cds-WP_001250363.1;Parent=gene-CCO46_RS11815;Dbxref=GenBank:WP_001250363.1;Name=WP_001250363.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=CCO46_RS11815;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001250363.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 126364 127368 . + . ID=gene-CCO46_RS11820;Name=CCO46_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11820;old_locus_tag=CCO46_11825 NZ_NPOH01000008.1 Protein Homology CDS 126364 127368 . + 0 ID=cds-WP_001247388.1;Parent=gene-CCO46_RS11820;Dbxref=GenBank:WP_001247388.1;Name=WP_001247388.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459035.1;locus_tag=CCO46_RS11820;product=LysR family transcriptional regulator;protein_id=WP_001247388.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 127376 127813 . - . ID=gene-CCO46_RS11825;Name=CCO46_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11825;old_locus_tag=CCO46_11830 NZ_NPOH01000008.1 Protein Homology CDS 127376 127813 . - 0 ID=cds-WP_094964443.1;Parent=gene-CCO46_RS11825;Dbxref=GenBank:WP_094964443.1;Name=WP_094964443.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=CCO46_RS11825;product=winged helix-turn-helix domain-containing protein;protein_id=WP_094964443.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 128336 130054 . + . ID=gene-CCO46_RS11830;Name=CCO46_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11830;old_locus_tag=CCO46_11835 NZ_NPOH01000008.1 Protein Homology CDS 128336 130054 . + 0 ID=cds-WP_058331388.1;Parent=gene-CCO46_RS11830;Dbxref=GenBank:WP_058331388.1;Name=WP_058331388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=CCO46_RS11830;product=aryl-sulfate sulfotransferase;protein_id=WP_058331388.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 130100 131671 . - . ID=gene-CCO46_RS11835;Name=CCO46_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11835;old_locus_tag=CCO46_11840 NZ_NPOH01000008.1 Protein Homology CDS 130100 131671 . - 0 ID=cds-WP_000262866.1;Parent=gene-CCO46_RS11835;Dbxref=GenBank:WP_000262866.1;Name=WP_000262866.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=CCO46_RS11835;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000262866.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 131770 132531 . - . ID=gene-CCO46_RS11840;Name=CCO46_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11840;old_locus_tag=CCO46_11845 NZ_NPOH01000008.1 Protein Homology CDS 131770 132531 . - 0 ID=cds-WP_000791534.1;Parent=gene-CCO46_RS11840;Dbxref=GenBank:WP_000791534.1;Name=WP_000791534.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=CCO46_RS11840;product=outer membrane protein OmpK;protein_id=WP_000791534.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 133127 134620 . + . ID=gene-CCO46_RS11845;Name=CCO46_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11845;old_locus_tag=CCO46_11850 NZ_NPOH01000008.1 Protein Homology CDS 133127 134620 . + 0 ID=cds-WP_094887783.1;Parent=gene-CCO46_RS11845;Dbxref=GenBank:WP_094887783.1;Name=WP_094887783.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=CCO46_RS11845;product=sulfatase family protein;protein_id=WP_094887783.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 134719 135909 . + . ID=gene-CCO46_RS11850;Name=CCO46_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11850;old_locus_tag=CCO46_11855 NZ_NPOH01000008.1 Protein Homology CDS 134719 135909 . + 0 ID=cds-WP_000971150.1;Parent=gene-CCO46_RS11850;Dbxref=GenBank:WP_000971150.1;Name=WP_000971150.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=CCO46_RS11850;product=anaerobic sulfatase maturase;protein_id=WP_000971150.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 135928 137181 . + . ID=gene-CCO46_RS11855;Name=CCO46_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11855;old_locus_tag=CCO46_11860 NZ_NPOH01000008.1 Protein Homology CDS 135928 137181 . + 0 ID=cds-WP_001055834.1;Parent=gene-CCO46_RS11855;Dbxref=GenBank:WP_001055834.1;Name=WP_001055834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=CCO46_RS11855;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_001055834.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 137308 139023 . + . ID=gene-CCO46_RS11860;Name=CCO46_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11860;old_locus_tag=CCO46_11865 NZ_NPOH01000008.1 Protein Homology CDS 137308 139023 . + 0 ID=cds-WP_001094797.1;Parent=gene-CCO46_RS11860;Dbxref=GenBank:WP_001094797.1;Name=WP_001094797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=CCO46_RS11860;product=aryl-sulfate sulfotransferase;protein_id=WP_001094797.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 139186 140352 . + . ID=gene-CCO46_RS11865;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=CCO46_RS11865;old_locus_tag=CCO46_11870 NZ_NPOH01000008.1 Protein Homology CDS 139186 140352 . + 0 ID=cds-WP_000681340.1;Parent=gene-CCO46_RS11865;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=CCO46_RS11865;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 140414 141313 . + . ID=gene-CCO46_RS11870;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=CCO46_RS11870;old_locus_tag=CCO46_11875 NZ_NPOH01000008.1 Protein Homology CDS 140414 141313 . + 0 ID=cds-WP_000062872.1;Parent=gene-CCO46_RS11870;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=CCO46_RS11870;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 141368 143407 . - . ID=gene-CCO46_RS11875;Name=CCO46_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11875;old_locus_tag=CCO46_11880 NZ_NPOH01000008.1 Protein Homology CDS 141368 143407 . - 0 ID=cds-WP_097363338.1;Parent=gene-CCO46_RS11875;Dbxref=GenBank:WP_097363338.1;Name=WP_097363338.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=CCO46_RS11875;product=glycoside hydrolase family 31 protein;protein_id=WP_097363338.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 143447 144820 . - . ID=gene-CCO46_RS11880;Name=CCO46_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11880;old_locus_tag=CCO46_11885 NZ_NPOH01000008.1 Protein Homology CDS 143447 144820 . - 0 ID=cds-WP_088759171.1;Parent=gene-CCO46_RS11880;Dbxref=GenBank:WP_088759171.1;Name=WP_088759171.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=CCO46_RS11880;product=MFS transporter;protein_id=WP_088759171.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 145276 145539 . - . ID=gene-CCO46_RS11885;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CCO46_RS11885;old_locus_tag=CCO46_11890 NZ_NPOH01000008.1 Protein Homology CDS 145276 145539 . - 0 ID=cds-WP_001518655.1;Parent=gene-CCO46_RS11885;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=CCO46_RS11885;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 145645 145860 . + . ID=gene-CCO46_RS11890;Name=CCO46_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11890;old_locus_tag=CCO46_11895 NZ_NPOH01000008.1 Protein Homology CDS 145645 145860 . + 0 ID=cds-WP_001726890.1;Parent=gene-CCO46_RS11890;Dbxref=GenBank:WP_001726890.1;Name=WP_001726890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=CCO46_RS11890;product=DUF2575 family protein;protein_id=WP_001726890.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 145868 146806 . + . ID=gene-CCO46_RS11895;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=CCO46_RS11895;old_locus_tag=CCO46_11900 NZ_NPOH01000008.1 Protein Homology CDS 145868 146806 . + 0 ID=cds-WP_000767311.1;Parent=gene-CCO46_RS11895;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=CCO46_RS11895;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 146851 149685 . + . ID=gene-CCO46_RS11900;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CCO46_RS11900;old_locus_tag=CCO46_11905 NZ_NPOH01000008.1 Protein Homology CDS 146851 149685 . + 0 ID=cds-WP_024134200.1;Parent=gene-CCO46_RS11900;Dbxref=GenBank:WP_024134200.1;Name=WP_024134200.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=CCO46_RS11900;product=isoleucine--tRNA ligase;protein_id=WP_024134200.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 149685 150185 . + . ID=gene-CCO46_RS11905;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CCO46_RS11905;old_locus_tag=CCO46_11910 NZ_NPOH01000008.1 Protein Homology CDS 149685 150185 . + 0 ID=cds-WP_000042736.1;Parent=gene-CCO46_RS11905;Dbxref=GenBank:WP_000042736.1;Name=WP_000042736.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=CCO46_RS11905;product=signal peptidase II;protein_id=WP_000042736.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 150340 150789 . + . ID=gene-CCO46_RS11910;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=CCO46_RS11910;old_locus_tag=CCO46_11915 NZ_NPOH01000008.1 Protein Homology CDS 150340 150789 . + 0 ID=cds-WP_000047269.1;Parent=gene-CCO46_RS11910;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=CCO46_RS11910;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 150792 151742 . + . ID=gene-CCO46_RS11915;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=CCO46_RS11915;old_locus_tag=CCO46_11920 NZ_NPOH01000008.1 Protein Homology CDS 150792 151742 . + 0 ID=cds-WP_001166428.1;Parent=gene-CCO46_RS11915;Dbxref=GenBank:WP_001166428.1;Name=WP_001166428.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=CCO46_RS11915;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166428.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 151942 153144 . + . ID=gene-CCO46_RS11920;Name=CCO46_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11920;old_locus_tag=CCO46_11925 NZ_NPOH01000008.1 Protein Homology CDS 151942 153144 . + 0 ID=cds-WP_000516315.1;Parent=gene-CCO46_RS11920;Dbxref=GenBank:WP_000516315.1;Name=WP_000516315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=CCO46_RS11920;product=XAC2610-related protein;protein_id=WP_000516315.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 153160 154080 . + . ID=gene-CCO46_RS11925;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CCO46_RS11925;old_locus_tag=CCO46_11930 NZ_NPOH01000008.1 Protein Homology CDS 153160 154080 . + 0 ID=cds-WP_058331386.1;Parent=gene-CCO46_RS11925;Dbxref=GenBank:WP_058331386.1;Name=WP_058331386.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=CCO46_RS11925;product=ribonucleoside hydrolase RihC;protein_id=WP_058331386.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 154102 154788 . - . ID=gene-CCO46_RS11930;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=CCO46_RS11930;old_locus_tag=CCO46_11935 NZ_NPOH01000008.1 Protein Homology CDS 154102 154788 . - 0 ID=cds-WP_000377415.1;Parent=gene-CCO46_RS11930;Dbxref=GenBank:WP_000377415.1;Name=WP_000377415.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=CCO46_RS11930;product=citrate response regulator transcription factor CitB;protein_id=WP_000377415.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 154790 156409 . - . ID=gene-CCO46_RS11935;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=CCO46_RS11935;old_locus_tag=CCO46_11940 NZ_NPOH01000008.1 Protein Homology CDS 154790 156409 . - 0 ID=cds-WP_058331442.1;Parent=gene-CCO46_RS11935;Dbxref=GenBank:WP_058331442.1;Name=WP_058331442.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=CCO46_RS11935;product=citrate sensor histidine kinase CitA;protein_id=WP_058331442.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 156544 157845 . - . ID=gene-CCO46_RS11940;Name=CCO46_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11940;old_locus_tag=CCO46_11945 NZ_NPOH01000008.1 Protein Homology CDS 156544 157845 . - 0 ID=cds-WP_097363339.1;Parent=gene-CCO46_RS11940;Dbxref=GenBank:WP_097363339.1;Name=WP_097363339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459747.1;locus_tag=CCO46_RS11940;product=oxalacetate decarboxylase subunit beta;protein_id=WP_097363339.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 157858 159618 . - . ID=gene-CCO46_RS11945;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO46_RS11945;old_locus_tag=CCO46_11950 NZ_NPOH01000008.1 Protein Homology CDS 157858 159618 . - 0 ID=cds-WP_097363340.1;Parent=gene-CCO46_RS11945;Dbxref=GenBank:WP_097363340.1;Name=WP_097363340.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO46_RS11945;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_097363340.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 159634 159879 . - . ID=gene-CCO46_RS11950;Name=CCO46_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS11950;old_locus_tag=CCO46_11955 NZ_NPOH01000008.1 Protein Homology CDS 159634 159879 . - 0 ID=cds-WP_058331385.1;Parent=gene-CCO46_RS11950;Dbxref=GenBank:WP_058331385.1;Name=WP_058331385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=CCO46_RS11950;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_058331385.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 160038 161378 . - . ID=gene-CCO46_RS11955;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=CCO46_RS11955;old_locus_tag=CCO46_11960 NZ_NPOH01000008.1 Protein Homology CDS 160038 161378 . - 0 ID=cds-WP_097363341.1;Parent=gene-CCO46_RS11955;Dbxref=GenBank:WP_097363341.1;Name=WP_097363341.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=CCO46_RS11955;product=citrate/sodium symporter CitS;protein_id=WP_097363341.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 161623 162666 . + . ID=gene-CCO46_RS11960;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO46_RS11960;old_locus_tag=CCO46_11965 NZ_NPOH01000008.1 Protein Homology CDS 161623 162666 . + 0 ID=cds-WP_097363342.1;Parent=gene-CCO46_RS11960;Dbxref=GenBank:WP_097363342.1;Name=WP_097363342.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=CCO46_RS11960;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_097363342.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 162696 162989 . + . ID=gene-CCO46_RS11965;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO46_RS11965;old_locus_tag=CCO46_11970 NZ_NPOH01000008.1 Protein Homology CDS 162696 162989 . + 0 ID=cds-WP_000691460.1;Parent=gene-CCO46_RS11965;Dbxref=GenBank:WP_000691460.1;Name=WP_000691460.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=CCO46_RS11965;product=citrate lyase acyl carrier protein;protein_id=WP_000691460.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 162986 163855 . + . ID=gene-CCO46_RS11970;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO46_RS11970;old_locus_tag=CCO46_11975 NZ_NPOH01000008.1 Protein Homology CDS 162986 163855 . + 0 ID=cds-WP_000804559.1;Parent=gene-CCO46_RS11970;Dbxref=GenBank:WP_000804559.1;Name=WP_000804559.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=CCO46_RS11970;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000804559.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 163866 165386 . + . ID=gene-CCO46_RS11975;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO46_RS11975;old_locus_tag=CCO46_11980 NZ_NPOH01000008.1 Protein Homology CDS 163866 165386 . + 0 ID=cds-WP_000665569.1;Parent=gene-CCO46_RS11975;Dbxref=GenBank:WP_000665569.1;Name=WP_000665569.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=CCO46_RS11975;product=citrate lyase subunit alpha;protein_id=WP_000665569.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 165386 165937 . + . ID=gene-CCO46_RS11980;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO46_RS11980;old_locus_tag=CCO46_11985 NZ_NPOH01000008.1 Protein Homology CDS 165386 165937 . + 0 ID=cds-WP_058331383.1;Parent=gene-CCO46_RS11980;Dbxref=GenBank:WP_058331383.1;Name=WP_058331383.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=CCO46_RS11980;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_058331383.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 165915 166823 . + . ID=gene-CCO46_RS11985;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO46_RS11985;old_locus_tag=CCO46_11990 NZ_NPOH01000008.1 Protein Homology CDS 165915 166823 . + 0 ID=cds-WP_001103238.1;Parent=gene-CCO46_RS11985;Dbxref=GenBank:WP_001103238.1;Name=WP_001103238.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=CCO46_RS11985;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_001103238.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 167003 167824 . + . ID=gene-CCO46_RS11990;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CCO46_RS11990;old_locus_tag=CCO46_11995 NZ_NPOH01000008.1 Protein Homology CDS 167003 167824 . + 0 ID=cds-WP_000544032.1;Parent=gene-CCO46_RS11990;Dbxref=GenBank:WP_000544032.1;Name=WP_000544032.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=CCO46_RS11990;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544032.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 168687 169835 . + . ID=gene-CCO46_RS12000;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=CCO46_RS12000;old_locus_tag=CCO46_12005 NZ_NPOH01000008.1 Protein Homology CDS 168687 169835 . + 0 ID=cds-WP_097363343.1;Parent=gene-CCO46_RS12000;Dbxref=GenBank:WP_097363343.1;Name=WP_097363343.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=CCO46_RS12000;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_097363343.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 169854 173081 . + . ID=gene-CCO46_RS12005;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CCO46_RS12005;old_locus_tag=CCO46_12010 NZ_NPOH01000008.1 Protein Homology CDS 169854 173081 . + 0 ID=cds-WP_094887738.1;Parent=gene-CCO46_RS12005;Dbxref=GenBank:WP_094887738.1;Name=WP_094887738.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=CCO46_RS12005;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_094887738.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 173355 173750 . + . ID=gene-CCO46_RS12010;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=CCO46_RS12010;old_locus_tag=CCO46_12015 NZ_NPOH01000008.1 Protein Homology CDS 173355 173750 . + 0 ID=cds-WP_000333324.1;Parent=gene-CCO46_RS12010;Dbxref=GenBank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=CCO46_RS12010;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 173828 174424 . - . ID=gene-CCO46_RS12015;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=CCO46_RS12015;old_locus_tag=CCO46_12020 NZ_NPOH01000008.1 Protein Homology CDS 173828 174424 . - 0 ID=cds-WP_000122864.1;Parent=gene-CCO46_RS12015;Dbxref=GenBank:WP_000122864.1;Name=WP_000122864.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=CCO46_RS12015;product=carnitine operon protein CaiE;protein_id=WP_000122864.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 174536 175321 . - . ID=gene-CCO46_RS12020;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=CCO46_RS12020;old_locus_tag=CCO46_12025 NZ_NPOH01000008.1 Protein Homology CDS 174536 175321 . - 0 ID=cds-WP_000004376.1;Parent=gene-CCO46_RS12020;Dbxref=GenBank:WP_000004376.1;Name=WP_000004376.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO46_RS12020;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004376.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 175375 176928 . - . ID=gene-CCO46_RS12025;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=CCO46_RS12025;old_locus_tag=CCO46_12030 NZ_NPOH01000008.1 Protein Homology CDS 175375 176928 . - 0 ID=cds-WP_000355797.1;Parent=gene-CCO46_RS12025;Dbxref=GenBank:WP_000355797.1;Name=WP_000355797.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=CCO46_RS12025;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_000355797.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 176991 178208 . - . ID=gene-CCO46_RS12030;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=CCO46_RS12030;old_locus_tag=CCO46_12035 NZ_NPOH01000008.1 Protein Homology CDS 176991 178208 . - 0 ID=cds-WP_001016212.1;Parent=gene-CCO46_RS12030;Dbxref=GenBank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=CCO46_RS12030;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 178320 179462 . - . ID=gene-CCO46_RS12035;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=CCO46_RS12035;old_locus_tag=CCO46_12040 NZ_NPOH01000008.1 Protein Homology CDS 178320 179462 . - 0 ID=cds-WP_000347134.1;Parent=gene-CCO46_RS12035;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=CCO46_RS12035;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 179497 181014 . - . ID=gene-CCO46_RS12040;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=CCO46_RS12040;old_locus_tag=CCO46_12045 NZ_NPOH01000008.1 Protein Homology CDS 179497 181014 . - 0 ID=cds-WP_000787073.1;Parent=gene-CCO46_RS12040;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=CCO46_RS12040;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 181495 182265 . + . ID=gene-CCO46_RS12050;Name=CCO46_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12050;old_locus_tag=CCO46_12055 NZ_NPOH01000008.1 Protein Homology CDS 181495 182265 . + 0 ID=cds-WP_079898017.1;Parent=gene-CCO46_RS12050;Dbxref=GenBank:WP_079898017.1;Name=WP_079898017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=CCO46_RS12050;product=electron transfer flavoprotein FixA;protein_id=WP_079898017.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 182281 183222 . + . ID=gene-CCO46_RS12055;Name=CCO46_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12055;old_locus_tag=CCO46_12060 NZ_NPOH01000008.1 Protein Homology CDS 182281 183222 . + 0 ID=cds-WP_001032198.1;Parent=gene-CCO46_RS12055;Dbxref=GenBank:WP_001032198.1;Name=WP_001032198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=CCO46_RS12055;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032198.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 183272 184558 . + . ID=gene-CCO46_RS12060;Name=CCO46_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12060;old_locus_tag=CCO46_12065 NZ_NPOH01000008.1 Protein Homology CDS 183272 184558 . + 0 ID=cds-WP_001287773.1;Parent=gene-CCO46_RS12060;Dbxref=GenBank:WP_001287773.1;Name=WP_001287773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=CCO46_RS12060;product=FAD-dependent oxidoreductase;protein_id=WP_001287773.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 184555 184842 . + . ID=gene-CCO46_RS12065;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=CCO46_RS12065;old_locus_tag=CCO46_12070 NZ_NPOH01000008.1 Protein Homology CDS 184555 184842 . + 0 ID=cds-WP_000203736.1;Parent=gene-CCO46_RS12065;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=CCO46_RS12065;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 184989 186329 . + . ID=gene-CCO46_RS12070;Name=CCO46_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12070;old_locus_tag=CCO46_12075 NZ_NPOH01000008.1 Protein Homology CDS 184989 186329 . + 0 ID=cds-WP_001187057.1;Parent=gene-CCO46_RS12070;Dbxref=GenBank:WP_001187057.1;Name=WP_001187057.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=CCO46_RS12070;product=MFS transporter;protein_id=WP_001187057.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 186418 186648 . + . ID=gene-CCO46_RS12075;Name=CCO46_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12075;old_locus_tag=CCO46_12080 NZ_NPOH01000008.1 Protein Homology CDS 186418 186648 . + 0 ID=cds-WP_001172089.1;Parent=gene-CCO46_RS12075;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=CCO46_RS12075;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11 NZ_NPOH01000008.1 RefSeq pseudogene 186675 186769 . + . ID=gene-CCO46_RS24940;Name=CCO46_RS24940;end_range=186769,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS24940;partial=true;pseudo=true NZ_NPOH01000008.1 Protein Homology CDS 186675 186769 . + 0 ID=cds-CCO46_RS24940;Parent=gene-CCO46_RS24940;Note=Required for full activity of KefC%2C a potassium-proton antiporter%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=186769,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=CCO46_RS24940;partial=true;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;pseudo=true;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 186935 187351 . + . ID=gene-CCO46_RS12080;Name=CCO46_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12080;old_locus_tag=CCO46_12085 NZ_NPOH01000008.1 Protein Homology CDS 186935 187351 . + 0 ID=cds-WP_000802643.1;Parent=gene-CCO46_RS12080;Dbxref=GenBank:WP_000802643.1;Name=WP_000802643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=CCO46_RS12080;product=hypothetical protein;protein_id=WP_000802643.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 187571 187861 . - . ID=gene-CCO46_RS12085;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=CCO46_RS12085;old_locus_tag=CCO46_12090 NZ_NPOH01000008.1 Protein Homology CDS 187571 187861 . - 0 ID=cds-WP_000710533.1;Parent=gene-CCO46_RS12085;Dbxref=GenBank:WP_000710533.1;Name=WP_000710533.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=CCO46_RS12085;product=DUF1471 family virulence protein SrfN;protein_id=WP_000710533.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 188757 190646 . + . ID=gene-CCO46_RS12100;Name=CCO46_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12100;old_locus_tag=CCO46_12105 NZ_NPOH01000008.1 Protein Homology CDS 188757 190646 . + 0 ID=cds-WP_097363344.1;Parent=gene-CCO46_RS12100;Dbxref=GenBank:WP_097363344.1;Name=WP_097363344.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=CCO46_RS12100;product=sulfatase-like hydrolase/transferase;protein_id=WP_097363344.1;transl_table=11 NZ_NPOH01000008.1 RefSeq pseudogene 190998 191063 . - . ID=gene-CCO46_RS25855;Name=CCO46_RS25855;end_range=191063,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25855;partial=true;pseudo=true NZ_NPOH01000008.1 Protein Homology CDS 190998 191063 . - 0 ID=cds-CCO46_RS25855;Parent=gene-CCO46_RS25855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=191063,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO46_RS25855;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 191199 191729 . + . ID=gene-CCO46_RS12115;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=CCO46_RS12115;old_locus_tag=CCO46_12120 NZ_NPOH01000008.1 Protein Homology CDS 191199 191729 . + 0 ID=cds-WP_000600706.1;Parent=gene-CCO46_RS12115;Dbxref=GenBank:WP_000600706.1;Name=WP_000600706.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=CCO46_RS12115;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600706.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 191722 193584 . + . ID=gene-CCO46_RS12120;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=CCO46_RS12120;old_locus_tag=CCO46_12125 NZ_NPOH01000008.1 Protein Homology CDS 191722 193584 . + 0 ID=cds-WP_001748918.1;Parent=gene-CCO46_RS12120;Dbxref=GenBank:WP_001748918.1;Name=WP_001748918.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=CCO46_RS12120;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_001748918.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 193783 194262 . + . ID=gene-CCO46_RS12125;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=CCO46_RS12125;old_locus_tag=CCO46_12130 NZ_NPOH01000008.1 Protein Homology CDS 193783 194262 . + 0 ID=cds-WP_000624379.1;Parent=gene-CCO46_RS12125;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=CCO46_RS12125;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 194368 195216 . - . ID=gene-CCO46_RS12130;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=CCO46_RS12130;old_locus_tag=CCO46_12135 NZ_NPOH01000008.1 Protein Homology CDS 194368 195216 . - 0 ID=cds-WP_000257211.1;Parent=gene-CCO46_RS12130;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=CCO46_RS12130;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 195227 195604 . - . ID=gene-CCO46_RS12135;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=CCO46_RS12135;old_locus_tag=CCO46_12140 NZ_NPOH01000008.1 Protein Homology CDS 195227 195604 . - 0 ID=cds-WP_000610894.1;Parent=gene-CCO46_RS12135;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=CCO46_RS12135;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 195607 196428 . - . ID=gene-CCO46_RS12140;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CCO46_RS12140;old_locus_tag=CCO46_12145 NZ_NPOH01000008.1 Protein Homology CDS 195607 196428 . - 0 ID=cds-WP_001065397.1;Parent=gene-CCO46_RS12140;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=CCO46_RS12140;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 196425 197414 . - . ID=gene-CCO46_RS12145;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=CCO46_RS12145;old_locus_tag=CCO46_12150 NZ_NPOH01000008.1 Protein Homology CDS 196425 197414 . - 0 ID=cds-WP_000093005.1;Parent=gene-CCO46_RS12145;Dbxref=GenBank:WP_000093005.1;Name=WP_000093005.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=CCO46_RS12145;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000093005.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 197414 198700 . - . ID=gene-CCO46_RS12150;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=CCO46_RS12150;old_locus_tag=CCO46_12155 NZ_NPOH01000008.1 Protein Homology CDS 197414 198700 . - 0 ID=cds-WP_000800482.1;Parent=gene-CCO46_RS12150;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=CCO46_RS12150;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 198754 201114 . - . ID=gene-CCO46_RS12155;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=CCO46_RS12155;old_locus_tag=CCO46_12160 NZ_NPOH01000008.1 Protein Homology CDS 198754 201114 . - 0 ID=cds-WP_000746119.1;Parent=gene-CCO46_RS12155;Dbxref=GenBank:WP_000746119.1;Name=WP_000746119.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=CCO46_RS12155;product=LPS assembly protein LptD;protein_id=WP_000746119.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 201368 202180 . + . ID=gene-CCO46_RS12160;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=CCO46_RS12160;old_locus_tag=CCO46_12165 NZ_NPOH01000008.1 Protein Homology CDS 201368 202180 . + 0 ID=cds-WP_001200591.1;Parent=gene-CCO46_RS12160;Dbxref=GenBank:WP_001200591.1;Name=WP_001200591.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=CCO46_RS12160;product=co-chaperone DjlA;protein_id=WP_001200591.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 202275 202934 . - . ID=gene-CCO46_RS12165;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=CCO46_RS12165;old_locus_tag=CCO46_12170 NZ_NPOH01000008.1 Protein Homology CDS 202275 202934 . - 0 ID=cds-WP_000525196.1;Parent=gene-CCO46_RS12165;Dbxref=GenBank:WP_000525196.1;Name=WP_000525196.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=CCO46_RS12165;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525196.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 202946 205852 . - . ID=gene-CCO46_RS12170;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=CCO46_RS12170;old_locus_tag=CCO46_12175 NZ_NPOH01000008.1 Protein Homology CDS 202946 205852 . - 0 ID=cds-WP_001116968.1;Parent=gene-CCO46_RS12170;Dbxref=GenBank:WP_001116968.1;Name=WP_001116968.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=CCO46_RS12170;product=RNA polymerase-associated protein RapA;protein_id=WP_001116968.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 206026 208377 . - . ID=gene-CCO46_RS12175;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=CCO46_RS12175;old_locus_tag=CCO46_12180 NZ_NPOH01000008.1 Protein Homology CDS 206026 208377 . - 0 ID=cds-WP_000035714.1;Parent=gene-CCO46_RS12175;Dbxref=GenBank:WP_000035714.1;Name=WP_000035714.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=CCO46_RS12175;product=DNA polymerase II;protein_id=WP_000035714.1;transl_table=11 NZ_NPOH01000008.1 RefSeq pseudogene 208421 208642 . - . ID=gene-CCO46_RS12180;Name=CCO46_RS12180;end_range=208642,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS12180;old_locus_tag=CCO46_12185;partial=true;pseudo=true NZ_NPOH01000008.1 Protein Homology CDS 208421 208642 . - 0 ID=cds-CCO46_RS12180;Parent=gene-CCO46_RS12180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=208642,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=CCO46_RS12180;partial=true;product=YdcF family protein;pseudo=true;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 208717 209121 . - . ID=gene-CCO46_RS12185;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=CCO46_RS12185;old_locus_tag=CCO46_12190 NZ_NPOH01000008.1 Protein Homology CDS 208717 209121 . - 0 ID=cds-WP_001169101.1;Parent=gene-CCO46_RS12185;Dbxref=GenBank:WP_001169101.1;Name=WP_001169101.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1;locus_tag=CCO46_RS12185;product=IS200/IS605 family transposase;protein_id=WP_001169101.1;transl_table=11 NZ_NPOH01000008.1 RefSeq gene 209180 210385 . + . ID=gene-CCO46_RS12190;Name=CCO46_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12190;old_locus_tag=CCO46_12195 NZ_NPOH01000008.1 Protein Homology CDS 209180 210385 . + 0 ID=cds-WP_023211177.1;Parent=gene-CCO46_RS12190;Dbxref=GenBank:WP_023211177.1;Name=WP_023211177.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669153.1;locus_tag=CCO46_RS12190;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_023211177.1;transl_table=11 NZ_NPOH01000008.1 RefSeq pseudogene 210461 210859 . - . ID=gene-CCO46_RS12195;Name=CCO46_RS12195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS12195;old_locus_tag=CCO46_12200;partial=true;pseudo=true;start_range=.,210461 NZ_NPOH01000008.1 Protein Homology CDS 210461 210859 . - 0 ID=cds-CCO46_RS12195;Parent=gene-CCO46_RS12195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=CCO46_RS12195;partial=true;product=YdcF family protein;pseudo=true;start_range=.,210461;transl_table=11 ##sequence-region NZ_NPOH01000009.1 1 181183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=29477 NZ_NPOH01000009.1 RefSeq region 1 181183 . + . ID=NZ_NPOH01000009.1:1..181183;Dbxref=taxon:29477;collected-by=University of Ibadan;collection-date=2011;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Essen;strain=CFSAN059899;sub-species=enterica NZ_NPOH01000009.1 RefSeq gene 197 691 . + . ID=gene-CCO46_RS12205;Name=CCO46_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12205;old_locus_tag=CCO46_12210 NZ_NPOH01000009.1 Protein Homology CDS 197 691 . + 0 ID=cds-WP_000439335.1;Parent=gene-CCO46_RS12205;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=CCO46_RS12205;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 998 2641 . + . ID=gene-CCO46_RS12210;Name=CCO46_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12210;old_locus_tag=CCO46_12215 NZ_NPOH01000009.1 Protein Homology CDS 998 2641 . + 0 ID=cds-WP_001238434.1;Parent=gene-CCO46_RS12210;Dbxref=GenBank:WP_001238434.1;Name=WP_001238434.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=CCO46_RS12210;product=methyl-accepting chemotaxis protein;protein_id=WP_001238434.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 2726 3013 . + . ID=gene-CCO46_RS12215;Name=CCO46_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12215;old_locus_tag=CCO46_12220 NZ_NPOH01000009.1 Protein Homology CDS 2726 3013 . + 0 ID=cds-WP_001059119.1;Parent=gene-CCO46_RS12215;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=CCO46_RS12215;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 3203 4321 . + . ID=gene-CCO46_RS12225;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=CCO46_RS12225;old_locus_tag=CCO46_12230 NZ_NPOH01000009.1 Protein Homology CDS 3203 4321 . + 0 ID=cds-WP_000145429.1;Parent=gene-CCO46_RS12225;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=CCO46_RS12225;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 4324 5310 . + . ID=gene-CCO46_RS12230;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=CCO46_RS12230;old_locus_tag=CCO46_12235 NZ_NPOH01000009.1 Protein Homology CDS 4324 5310 . + 0 ID=cds-WP_001081721.1;Parent=gene-CCO46_RS12230;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=CCO46_RS12230;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 5300 6478 . + . ID=gene-CCO46_RS12235;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=CCO46_RS12235;old_locus_tag=CCO46_12240 NZ_NPOH01000009.1 Protein Homology CDS 5300 6478 . + 0 ID=cds-WP_000017678.1;Parent=gene-CCO46_RS12235;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=CCO46_RS12235;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 6475 8178 . + . ID=gene-CCO46_RS12240;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=CCO46_RS12240;old_locus_tag=CCO46_12245 NZ_NPOH01000009.1 Protein Homology CDS 6475 8178 . + 0 ID=cds-WP_000083044.1;Parent=gene-CCO46_RS12240;Dbxref=GenBank:WP_000083044.1;Name=WP_000083044.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=CCO46_RS12240;product=hydrogenase 2 large subunit;protein_id=WP_000083044.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 8178 8672 . + . ID=gene-CCO46_RS12245;Name=CCO46_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12245;old_locus_tag=CCO46_12250 NZ_NPOH01000009.1 Protein Homology CDS 8178 8672 . + 0 ID=cds-WP_001221962.1;Parent=gene-CCO46_RS12245;Dbxref=GenBank:WP_001221962.1;Name=WP_001221962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=CCO46_RS12245;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221962.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 8665 9153 . + . ID=gene-CCO46_RS12250;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=CCO46_RS12250;old_locus_tag=CCO46_12255 NZ_NPOH01000009.1 Protein Homology CDS 8665 9153 . + 0 ID=cds-WP_000004951.1;Parent=gene-CCO46_RS12250;Dbxref=GenBank:WP_000004951.1;Name=WP_000004951.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=CCO46_RS12250;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004951.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 9146 9487 . + . ID=gene-CCO46_RS12255;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO46_RS12255;old_locus_tag=CCO46_12260 NZ_NPOH01000009.1 Protein Homology CDS 9146 9487 . + 0 ID=cds-WP_000544945.1;Parent=gene-CCO46_RS12255;Dbxref=GenBank:WP_000544945.1;Name=WP_000544945.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=CCO46_RS12255;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544945.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 9515 9763 . + . ID=gene-CCO46_RS12260;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=CCO46_RS12260;old_locus_tag=CCO46_12265 NZ_NPOH01000009.1 Protein Homology CDS 9515 9763 . + 0 ID=cds-WP_000334890.1;Parent=gene-CCO46_RS12260;Dbxref=GenBank:WP_000334890.1;Name=WP_000334890.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=CCO46_RS12260;product=hydrogenase maturation factor HybG;protein_id=WP_000334890.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 9839 10891 . + . ID=gene-CCO46_RS12265;Name=CCO46_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12265;old_locus_tag=CCO46_12270 NZ_NPOH01000009.1 Protein Homology CDS 9839 10891 . + 0 ID=cds-WP_023202156.1;Parent=gene-CCO46_RS12265;Dbxref=GenBank:WP_023202156.1;Name=WP_023202156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=CCO46_RS12265;product=ABC transporter substrate-binding protein;protein_id=WP_023202156.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 10891 11601 . + . ID=gene-CCO46_RS12270;Name=CCO46_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12270;old_locus_tag=CCO46_12275 NZ_NPOH01000009.1 Protein Homology CDS 10891 11601 . + 0 ID=cds-WP_058331666.1;Parent=gene-CCO46_RS12270;Dbxref=GenBank:WP_058331666.1;Name=WP_058331666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=CCO46_RS12270;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_058331666.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 11669 12535 . - . ID=gene-CCO46_RS12275;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=CCO46_RS12275;old_locus_tag=CCO46_12280 NZ_NPOH01000009.1 Protein Homology CDS 11669 12535 . - 0 ID=cds-WP_058331667.1;Parent=gene-CCO46_RS12275;Dbxref=GenBank:WP_058331667.1;Name=WP_058331667.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=CCO46_RS12275;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_058331667.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 12762 14618 . + . ID=gene-CCO46_RS12280;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=CCO46_RS12280;old_locus_tag=CCO46_12285 NZ_NPOH01000009.1 Protein Homology CDS 12762 14618 . + 0 ID=cds-WP_000033690.1;Parent=gene-CCO46_RS12280;Dbxref=GenBank:WP_000033690.1;Name=WP_000033690.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=CCO46_RS12280;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_000033690.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 15288 16346 . + . ID=gene-CCO46_RS12290;Name=CCO46_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12290;old_locus_tag=CCO46_12295 NZ_NPOH01000009.1 Protein Homology CDS 15288 16346 . + 0 ID=cds-WP_000475247.1;Parent=gene-CCO46_RS12290;Dbxref=GenBank:WP_000475247.1;Name=WP_000475247.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=CCO46_RS12290;product=methyl-accepting chemotaxis protein;protein_id=WP_000475247.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 16646 18058 . - . ID=gene-CCO46_RS12295;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=CCO46_RS12295;old_locus_tag=CCO46_12300 NZ_NPOH01000009.1 Protein Homology CDS 16646 18058 . - 0 ID=cds-WP_000190180.1;Parent=gene-CCO46_RS12295;Dbxref=GenBank:WP_000190180.1;Name=WP_000190180.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=CCO46_RS12295;product=glucuronate isomerase;protein_id=WP_000190180.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 18070 19542 . - . ID=gene-CCO46_RS12300;Name=CCO46_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12300;old_locus_tag=CCO46_12305 NZ_NPOH01000009.1 Protein Homology CDS 18070 19542 . - 0 ID=cds-WP_000437132.1;Parent=gene-CCO46_RS12300;Dbxref=GenBank:WP_000437132.1;Name=WP_000437132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=CCO46_RS12300;product=fructuronate reductase;protein_id=WP_000437132.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 19653 20837 . - . ID=gene-CCO46_RS12305;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=CCO46_RS12305;old_locus_tag=CCO46_12310 NZ_NPOH01000009.1 Protein Homology CDS 19653 20837 . - 0 ID=cds-WP_000815487.1;Parent=gene-CCO46_RS12305;Dbxref=GenBank:WP_000815487.1;Name=WP_000815487.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=CCO46_RS12305;product=mannonate dehydratase;protein_id=WP_000815487.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 21241 22545 . + . ID=gene-CCO46_RS12310;Name=CCO46_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12310;old_locus_tag=CCO46_12315 NZ_NPOH01000009.1 Protein Homology CDS 21241 22545 . + 0 ID=cds-WP_000784371.1;Parent=gene-CCO46_RS12310;Dbxref=GenBank:WP_000784371.1;Name=WP_000784371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=CCO46_RS12310;product=MFS transporter;protein_id=WP_000784371.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 22941 23819 . + . ID=gene-CCO46_RS12315;Name=CCO46_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12315;old_locus_tag=CCO46_12320 NZ_NPOH01000009.1 Protein Homology CDS 22941 23819 . + 0 ID=cds-WP_000089254.1;Parent=gene-CCO46_RS12315;Dbxref=GenBank:WP_000089254.1;Name=WP_000089254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=CCO46_RS12315;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000089254.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 23858 24781 . + . ID=gene-CCO46_RS12320;Name=CCO46_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12320;old_locus_tag=CCO46_12325 NZ_NPOH01000009.1 Protein Homology CDS 23858 24781 . + 0 ID=cds-WP_058331668.1;Parent=gene-CCO46_RS12320;Dbxref=GenBank:WP_058331668.1;Name=WP_058331668.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=CCO46_RS12320;product=polysaccharide deacetylase family protein;protein_id=WP_058331668.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 25507 25992 . + . ID=gene-CCO46_RS12325;Name=CCO46_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12325;old_locus_tag=CCO46_12330 NZ_NPOH01000009.1 Protein Homology CDS 25507 25992 . + 0 ID=cds-WP_058331669.1;Parent=gene-CCO46_RS12325;Dbxref=GenBank:WP_058331669.1;Name=WP_058331669.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=CCO46_RS12325;product=Hcp family type VI secretion system effector;protein_id=WP_058331669.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 25992 26372 . + . ID=gene-CCO46_RS12330;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=CCO46_RS12330;old_locus_tag=CCO46_12335 NZ_NPOH01000009.1 Protein Homology CDS 25992 26372 . + 0 ID=cds-WP_024937456.1;Parent=gene-CCO46_RS12330;Dbxref=GenBank:WP_024937456.1;Name=WP_024937456.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=CCO46_RS12330;product=anti-adapter protein IraD;protein_id=WP_024937456.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 26508 27992 . - . ID=gene-CCO46_RS12335;Name=CCO46_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12335;old_locus_tag=CCO46_12340 NZ_NPOH01000009.1 Protein Homology CDS 26508 27992 . - 0 ID=cds-WP_001286404.1;Parent=gene-CCO46_RS12335;Dbxref=GenBank:WP_001286404.1;Name=WP_001286404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=CCO46_RS12335;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_001286404.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 28154 29455 . + . ID=gene-CCO46_RS12340;Name=CCO46_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12340;old_locus_tag=CCO46_12345 NZ_NPOH01000009.1 Protein Homology CDS 28154 29455 . + 0 ID=cds-WP_001093168.1;Parent=gene-CCO46_RS12340;Dbxref=GenBank:WP_001093168.1;Name=WP_001093168.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=CCO46_RS12340;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001093168.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 29470 29844 . + . ID=gene-CCO46_RS12345;Name=CCO46_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12345;old_locus_tag=CCO46_12350 NZ_NPOH01000009.1 Protein Homology CDS 29470 29844 . + 0 ID=cds-WP_000542984.1;Parent=gene-CCO46_RS12345;Dbxref=GenBank:WP_000542984.1;Name=WP_000542984.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=CCO46_RS12345;product=cupin domain-containing protein;protein_id=WP_000542984.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 30053 31552 . + . ID=gene-CCO46_RS12350;Name=CCO46_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12350;old_locus_tag=CCO46_12355 NZ_NPOH01000009.1 Protein Homology CDS 30053 31552 . + 0 ID=cds-WP_097363345.1;Parent=gene-CCO46_RS12350;Dbxref=GenBank:WP_097363345.1;Name=WP_097363345.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=CCO46_RS12350;product=APC family permease;protein_id=WP_097363345.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 31530 32087 . + . ID=gene-CCO46_RS12355;Name=CCO46_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12355;old_locus_tag=CCO46_12360 NZ_NPOH01000009.1 Protein Homology CDS 31530 32087 . + 0 ID=cds-WP_000100098.1;Parent=gene-CCO46_RS12355;Dbxref=GenBank:WP_000100098.1;Name=WP_000100098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=CCO46_RS12355;product=DUF3156 family protein;protein_id=WP_000100098.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 32192 32875 . - . ID=gene-CCO46_RS12360;Name=CCO46_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12360;old_locus_tag=CCO46_12365 NZ_NPOH01000009.1 Protein Homology CDS 32192 32875 . - 0 ID=cds-WP_088758503.1;Parent=gene-CCO46_RS12360;Dbxref=GenBank:WP_088758503.1;Name=WP_088758503.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=CCO46_RS12360;product=helix-turn-helix transcriptional regulator;protein_id=WP_088758503.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 34589 35908 . - . ID=gene-CCO46_RS12380;Name=CCO46_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12380;old_locus_tag=CCO46_12385 NZ_NPOH01000009.1 Protein Homology CDS 34589 35908 . - 0 ID=cds-WP_097363346.1;Parent=gene-CCO46_RS12380;Dbxref=GenBank:WP_097363346.1;Name=WP_097363346.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534139.1;locus_tag=CCO46_RS12380;product=ferredoxin reductase family protein;protein_id=WP_097363346.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 35984 36247 . - . ID=gene-CCO46_RS12385;Name=CCO46_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12385;old_locus_tag=CCO46_12390 NZ_NPOH01000009.1 Protein Homology CDS 35984 36247 . - 0 ID=cds-WP_001027081.1;Parent=gene-CCO46_RS12385;Dbxref=GenBank:WP_001027081.1;Name=WP_001027081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.6;locus_tag=CCO46_RS12385;product=YdgH/BhsA/McbA-like domain containing protein;protein_id=WP_001027081.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 36273 36896 . - . ID=gene-CCO46_RS12390;Name=CCO46_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12390;old_locus_tag=CCO46_12395 NZ_NPOH01000009.1 Protein Homology CDS 36273 36896 . - 0 ID=cds-WP_023254044.1;Parent=gene-CCO46_RS12390;Dbxref=GenBank:WP_023254044.1;Name=WP_023254044.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,azobenzene reductase activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697438.1;locus_tag=CCO46_RS12390;product=FMN-dependent NADH-azoreductase;protein_id=WP_023254044.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 36997 37911 . + . ID=gene-CCO46_RS12395;Name=CCO46_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12395;old_locus_tag=CCO46_12400 NZ_NPOH01000009.1 Protein Homology CDS 36997 37911 . + 0 ID=cds-WP_058215492.1;Parent=gene-CCO46_RS12395;Dbxref=GenBank:WP_058215492.1;Name=WP_058215492.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441073.1;locus_tag=CCO46_RS12395;product=LysR family transcriptional regulator;protein_id=WP_058215492.1;transl_table=11 NZ_NPOH01000009.1 RefSeq pseudogene 38176 38404 . - . ID=gene-CCO46_RS25860;Name=CCO46_RS25860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25860;old_locus_tag=CCO46_12405;partial=true;pseudo=true;start_range=.,38176 NZ_NPOH01000009.1 Protein Homology CDS 38176 38404 . - 0 ID=cds-CCO46_RS25860;Parent=gene-CCO46_RS25860;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975783.1;locus_tag=CCO46_RS25860;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,38176;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 38563 38638 . - . ID=gene-CCO46_RS12405;Name=CCO46_RS12405;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS12405;old_locus_tag=CCO46_12410 NZ_NPOH01000009.1 tRNAscan-SE tRNA 38563 38638 . - . ID=rna-CCO46_RS12405;Parent=gene-CCO46_RS12405;anticodon=(pos:complement(38603..38605));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS12405;product=tRNA-Phe NZ_NPOH01000009.1 tRNAscan-SE exon 38563 38638 . - . ID=exon-CCO46_RS12405-1;Parent=rna-CCO46_RS12405;anticodon=(pos:complement(38603..38605));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS12405;product=tRNA-Phe NZ_NPOH01000009.1 RefSeq gene 38744 39451 . - . ID=gene-CCO46_RS12410;Name=CCO46_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12410;old_locus_tag=CCO46_12415 NZ_NPOH01000009.1 Protein Homology CDS 38744 39451 . - 0 ID=cds-WP_000234466.1;Parent=gene-CCO46_RS12410;Dbxref=GenBank:WP_000234466.1;Name=WP_000234466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=CCO46_RS12410;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 39877 42012 . + . ID=gene-CCO46_RS12420;Name=CCO46_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12420;old_locus_tag=CCO46_12425 NZ_NPOH01000009.1 Protein Homology CDS 39877 42012 . + 0 ID=cds-WP_058331711.1;Parent=gene-CCO46_RS12420;Dbxref=GenBank:WP_058331711.1;Name=WP_058331711.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=CCO46_RS12420;product=ornithine decarboxylase;protein_id=WP_058331711.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 42074 43330 . - . ID=gene-CCO46_RS12425;Name=CCO46_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12425;old_locus_tag=CCO46_12430 NZ_NPOH01000009.1 Protein Homology CDS 42074 43330 . - 0 ID=cds-WP_001049803.1;Parent=gene-CCO46_RS12425;Dbxref=GenBank:WP_001049803.1;Name=WP_001049803.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=CCO46_RS12425;product=nucleoside permease;protein_id=WP_001049803.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 43547 44632 . - . ID=gene-CCO46_RS12430;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=CCO46_RS12430;old_locus_tag=CCO46_12435 NZ_NPOH01000009.1 Protein Homology CDS 43547 44632 . - 0 ID=cds-WP_080159985.1;Parent=gene-CCO46_RS12430;Dbxref=GenBank:WP_080159985.1;Name=WP_080159985.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=CCO46_RS12430;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_080159985.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 44745 45020 . - . ID=gene-CCO46_RS12435;Name=CCO46_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12435;old_locus_tag=CCO46_12440 NZ_NPOH01000009.1 Protein Homology CDS 44745 45020 . - 0 ID=cds-WP_000091706.1;Parent=gene-CCO46_RS12435;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=CCO46_RS12435;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 45048 46100 . - . ID=gene-CCO46_RS12440;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CCO46_RS12440;old_locus_tag=CCO46_12445 NZ_NPOH01000009.1 Protein Homology CDS 45048 46100 . - 0 ID=cds-WP_001148957.1;Parent=gene-CCO46_RS12440;Dbxref=GenBank:WP_001148957.1;Name=WP_001148957.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=CCO46_RS12440;product=A/G-specific adenine glycosylase;protein_id=WP_001148957.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 46255 46974 . + . ID=gene-CCO46_RS12450;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CCO46_RS12450;old_locus_tag=CCO46_12455 NZ_NPOH01000009.1 Protein Homology CDS 46255 46974 . + 0 ID=cds-WP_000786893.1;Parent=gene-CCO46_RS12450;Dbxref=GenBank:WP_000786893.1;Name=WP_000786893.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=CCO46_RS12450;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786893.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 46974 47300 . + . ID=gene-CCO46_RS12455;Name=CCO46_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12455;old_locus_tag=CCO46_12460 NZ_NPOH01000009.1 Protein Homology CDS 46974 47300 . + 0 ID=cds-WP_001107574.1;Parent=gene-CCO46_RS12455;Dbxref=GenBank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=CCO46_RS12455;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 47350 48069 . + . ID=gene-CCO46_RS12460;Name=CCO46_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12460;old_locus_tag=CCO46_12465 NZ_NPOH01000009.1 Protein Homology CDS 47350 48069 . + 0 ID=cds-WP_000984827.1;Parent=gene-CCO46_RS12460;Dbxref=GenBank:WP_000984827.1;Name=WP_000984827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=CCO46_RS12460;product=DUF2884 domain-containing protein;protein_id=WP_000984827.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 48258 49304 . + . ID=gene-CCO46_RS12465;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=CCO46_RS12465;old_locus_tag=CCO46_12470 NZ_NPOH01000009.1 Protein Homology CDS 48258 49304 . + 0 ID=cds-WP_000394189.1;Parent=gene-CCO46_RS12465;Dbxref=GenBank:WP_000394189.1;Name=WP_000394189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=CCO46_RS12465;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 49437 50444 . + . ID=gene-CCO46_RS12470;Name=CCO46_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12470;old_locus_tag=CCO46_12475 NZ_NPOH01000009.1 Protein Homology CDS 49437 50444 . + 0 ID=cds-WP_000252198.1;Parent=gene-CCO46_RS12470;Dbxref=GenBank:WP_000252198.1;Name=WP_000252198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=CCO46_RS12470;product=DUF1202 domain-containing protein;protein_id=WP_000252198.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 50536 51672 . - . ID=gene-CCO46_RS12475;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CCO46_RS12475;old_locus_tag=CCO46_12480 NZ_NPOH01000009.1 Protein Homology CDS 50536 51672 . - 0 ID=cds-WP_061371885.1;Parent=gene-CCO46_RS12475;Dbxref=GenBank:WP_061371885.1;Name=WP_061371885.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=CCO46_RS12475;product=radical SAM family heme chaperone HemW;protein_id=WP_061371885.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 51665 52258 . - . ID=gene-CCO46_RS12480;Name=CCO46_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12480;old_locus_tag=CCO46_12485 NZ_NPOH01000009.1 Protein Homology CDS 51665 52258 . - 0 ID=cds-WP_001174769.1;Parent=gene-CCO46_RS12480;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=CCO46_RS12480;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 52266 52556 . - . ID=gene-CCO46_RS12485;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=CCO46_RS12485;old_locus_tag=CCO46_12490 NZ_NPOH01000009.1 Protein Homology CDS 52266 52556 . - 0 ID=cds-WP_001277204.1;Parent=gene-CCO46_RS12485;Dbxref=GenBank:WP_001277204.1;Name=WP_001277204.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=CCO46_RS12485;product=DUF167 family protein YggU;protein_id=WP_001277204.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 52553 53119 . - . ID=gene-CCO46_RS12490;Name=CCO46_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12490;old_locus_tag=CCO46_12495 NZ_NPOH01000009.1 Protein Homology CDS 52553 53119 . - 0 ID=cds-WP_001094848.1;Parent=gene-CCO46_RS12490;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=CCO46_RS12490;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 53138 53842 . - . ID=gene-CCO46_RS12495;Name=CCO46_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12495;old_locus_tag=CCO46_12500 NZ_NPOH01000009.1 Protein Homology CDS 53138 53842 . - 0 ID=cds-WP_000997812.1;Parent=gene-CCO46_RS12495;Dbxref=GenBank:WP_000997812.1;Name=WP_000997812.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=CCO46_RS12495;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997812.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 53860 54840 . + . ID=gene-CCO46_RS12500;Name=CCO46_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12500;old_locus_tag=CCO46_12505 NZ_NPOH01000009.1 Protein Homology CDS 53860 54840 . + 0 ID=cds-WP_023202164.1;Parent=gene-CCO46_RS12500;Dbxref=GenBank:WP_023202164.1;Name=WP_023202164.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=CCO46_RS12500;product=type IV pilus twitching motility protein PilT;protein_id=WP_023202164.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 54972 55658 . + . ID=gene-CCO46_RS12505;Name=CCO46_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12505;old_locus_tag=CCO46_12510 NZ_NPOH01000009.1 Protein Homology CDS 54972 55658 . + 0 ID=cds-WP_023202165.1;Parent=gene-CCO46_RS12505;Dbxref=GenBank:WP_023202165.1;Name=WP_023202165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=CCO46_RS12505;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_023202165.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 55705 56121 . - . ID=gene-CCO46_RS12510;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CCO46_RS12510;old_locus_tag=CCO46_12515 NZ_NPOH01000009.1 Protein Homology CDS 55705 56121 . - 0 ID=cds-WP_023202166.1;Parent=gene-CCO46_RS12510;Dbxref=GenBank:WP_023202166.1;Name=WP_023202166.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=CCO46_RS12510;product=Holliday junction resolvase RuvX;protein_id=WP_023202166.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 56121 56684 . - . ID=gene-CCO46_RS12515;Name=CCO46_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12515;old_locus_tag=CCO46_12520 NZ_NPOH01000009.1 Protein Homology CDS 56121 56684 . - 0 ID=cds-WP_001053171.1;Parent=gene-CCO46_RS12515;Dbxref=GenBank:WP_001053171.1;Name=WP_001053171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=CCO46_RS12515;product=YqgE/AlgH family protein;protein_id=WP_001053171.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 56900 57847 . - . ID=gene-CCO46_RS12520;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=CCO46_RS12520;old_locus_tag=CCO46_12525 NZ_NPOH01000009.1 Protein Homology CDS 56900 57847 . - 0 ID=cds-WP_000593248.1;Parent=gene-CCO46_RS12520;Dbxref=GenBank:WP_000593248.1;Name=WP_000593248.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=CCO46_RS12520;product=glutathione synthase;protein_id=WP_000593248.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 57867 58598 . - . ID=gene-CCO46_RS12525;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=CCO46_RS12525;old_locus_tag=CCO46_12530 NZ_NPOH01000009.1 Protein Homology CDS 57867 58598 . - 0 ID=cds-WP_001675718.1;Parent=gene-CCO46_RS12525;Dbxref=GenBank:WP_001675718.1;Name=WP_001675718.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=CCO46_RS12525;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001675718.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 58675 59382 . - . ID=gene-CCO46_RS12530;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=CCO46_RS12530;old_locus_tag=CCO46_12535 NZ_NPOH01000009.1 Protein Homology CDS 58675 59382 . - 0 ID=cds-WP_000286124.1;Parent=gene-CCO46_RS12530;Dbxref=GenBank:WP_000286124.1;Name=WP_000286124.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=CCO46_RS12530;product=deoxyribonuclease I;protein_id=WP_000286124.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 59477 59974 . - . ID=gene-CCO46_RS12535;Name=CCO46_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12535;old_locus_tag=CCO46_12540 NZ_NPOH01000009.1 Protein Homology CDS 59477 59974 . - 0 ID=cds-WP_000856775.1;Parent=gene-CCO46_RS12535;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=CCO46_RS12535;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 60053 61447 . - . ID=gene-CCO46_RS12540;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=CCO46_RS12540;old_locus_tag=CCO46_12545 NZ_NPOH01000009.1 Protein Homology CDS 60053 61447 . - 0 ID=cds-WP_001113171.1;Parent=gene-CCO46_RS12540;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=CCO46_RS12540;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 61940 63094 . - . ID=gene-CCO46_RS12545;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CCO46_RS12545;old_locus_tag=CCO46_12550 NZ_NPOH01000009.1 Protein Homology CDS 61940 63094 . - 0 ID=cds-WP_001062140.1;Parent=gene-CCO46_RS12545;Dbxref=GenBank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=CCO46_RS12545;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 63150 63449 . + . ID=gene-CCO46_RS12550;Name=CCO46_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12550;old_locus_tag=CCO46_12555 NZ_NPOH01000009.1 GeneMarkS-2+ CDS 63150 63449 . + 0 ID=cds-WP_001543499.1;Parent=gene-CCO46_RS12550;Dbxref=GenBank:WP_001543499.1;Name=WP_001543499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS12550;product=hypothetical protein;protein_id=WP_001543499.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 63509 63658 . + . ID=gene-CCO46_RS25665;Name=CCO46_RS25665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS25665 NZ_NPOH01000009.1 Protein Homology CDS 63509 63658 . + 0 ID=cds-WP_001751809.1;Parent=gene-CCO46_RS25665;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=CCO46_RS25665;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 63744 63875 . + . ID=gene-CCO46_RS12560;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=CCO46_RS12560;old_locus_tag=CCO46_12565 NZ_NPOH01000009.1 Protein Homology CDS 63744 63875 . + 0 ID=cds-WP_000729109.1;Parent=gene-CCO46_RS12560;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=CCO46_RS12560;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 63884 65860 . + . ID=gene-CCO46_RS12565;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=CCO46_RS12565;old_locus_tag=CCO46_12570 NZ_NPOH01000009.1 Protein Homology CDS 63884 65860 . + 0 ID=cds-WP_001278580.1;Parent=gene-CCO46_RS12565;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=CCO46_RS12565;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 66089 67009 . + . ID=gene-CCO46_RS12570;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=CCO46_RS12570;old_locus_tag=CCO46_12575 NZ_NPOH01000009.1 Protein Homology CDS 66089 67009 . + 0 ID=cds-WP_000105550.1;Parent=gene-CCO46_RS12570;Dbxref=GenBank:WP_000105550.1;Name=WP_000105550.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=CCO46_RS12570;product=agmatinase;protein_id=WP_000105550.1;transl_table=11 NZ_NPOH01000009.1 RefSeq pseudogene 67013 67097 . + . ID=gene-CCO46_RS25865;Name=CCO46_RS25865;end_range=67097,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO46_RS25865;partial=true;pseudo=true;start_range=.,67013 NZ_NPOH01000009.1 Protein Homology CDS 67013 67097 . + 0 ID=cds-CCO46_RS25865;Parent=gene-CCO46_RS25865;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=67097,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO46_RS25865;partial=true;product=hypothetical protein;pseudo=true;start_range=.,67013;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 67110 67868 . - . ID=gene-CCO46_RS12575;Name=CCO46_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12575;old_locus_tag=CCO46_12580 NZ_NPOH01000009.1 Protein Homology CDS 67110 67868 . - 0 ID=cds-WP_000701830.1;Parent=gene-CCO46_RS12575;Dbxref=GenBank:WP_000701830.1;Name=WP_000701830.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=CCO46_RS12575;product=M48 family metallopeptidase;protein_id=WP_000701830.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 68144 70135 . + . ID=gene-CCO46_RS12580;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO46_RS12580;old_locus_tag=CCO46_12585 NZ_NPOH01000009.1 Protein Homology CDS 68144 70135 . + 0 ID=cds-WP_023254462.1;Parent=gene-CCO46_RS12580;Dbxref=GenBank:WP_023254462.1;Name=WP_023254462.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=CCO46_RS12580;product=transketolase;protein_id=WP_023254462.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 70179 70835 . - . ID=gene-CCO46_RS12585;Name=CCO46_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12585;old_locus_tag=CCO46_12590 NZ_NPOH01000009.1 Protein Homology CDS 70179 70835 . - 0 ID=cds-WP_094882200.1;Parent=gene-CCO46_RS12585;Dbxref=GenBank:WP_094882200.1;Name=WP_094882200.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=CCO46_RS12585;product=ABC transporter ATP-binding protein;protein_id=WP_094882200.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 70829 71506 . - . ID=gene-CCO46_RS12590;Name=CCO46_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12590;old_locus_tag=CCO46_12595 NZ_NPOH01000009.1 Protein Homology CDS 70829 71506 . - 0 ID=cds-WP_001534176.1;Parent=gene-CCO46_RS12590;Dbxref=GenBank:WP_001534176.1;Name=WP_001534176.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=CCO46_RS12590;product=ABC transporter ATP-binding protein;protein_id=WP_001534176.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 71494 72201 . - . ID=gene-CCO46_RS12595;Name=CCO46_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12595;old_locus_tag=CCO46_12600 NZ_NPOH01000009.1 Protein Homology CDS 71494 72201 . - 0 ID=cds-WP_000553280.1;Parent=gene-CCO46_RS12595;Dbxref=GenBank:WP_000553280.1;Name=WP_000553280.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=CCO46_RS12595;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_000553280.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 72202 72780 . - . ID=gene-CCO46_RS12600;Name=CCO46_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12600;old_locus_tag=CCO46_12605 NZ_NPOH01000009.1 Protein Homology CDS 72202 72780 . - 0 ID=cds-WP_000124001.1;Parent=gene-CCO46_RS12600;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=CCO46_RS12600;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 72806 73231 . - . ID=gene-CCO46_RS12605;Name=CCO46_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12605;old_locus_tag=CCO46_12610 NZ_NPOH01000009.1 Protein Homology CDS 72806 73231 . - 0 ID=cds-WP_000218566.1;Parent=gene-CCO46_RS12605;Dbxref=GenBank:WP_000218566.1;Name=WP_000218566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=CCO46_RS12605;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218566.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 73605 74651 . + . ID=gene-CCO46_RS12615;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=CCO46_RS12615;old_locus_tag=CCO46_12620 NZ_NPOH01000009.1 Protein Homology CDS 73605 74651 . + 0 ID=cds-WP_000218338.1;Parent=gene-CCO46_RS12615;Dbxref=GenBank:WP_000218338.1;Name=WP_000218338.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=CCO46_RS12615;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218338.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 74673 75836 . + . ID=gene-CCO46_RS12620;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CCO46_RS12620;old_locus_tag=CCO46_12625 NZ_NPOH01000009.1 Protein Homology CDS 74673 75836 . + 0 ID=cds-WP_000111274.1;Parent=gene-CCO46_RS12620;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=CCO46_RS12620;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 75938 77017 . + . ID=gene-CCO46_RS12625;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=CCO46_RS12625;old_locus_tag=CCO46_12630 NZ_NPOH01000009.1 Protein Homology CDS 75938 77017 . + 0 ID=cds-WP_000034386.1;Parent=gene-CCO46_RS12625;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=CCO46_RS12625;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 77250 78110 . + . ID=gene-CCO46_RS12630;Name=CCO46_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12630;old_locus_tag=CCO46_12635 NZ_NPOH01000009.1 Protein Homology CDS 77250 78110 . + 0 ID=cds-WP_000389833.1;Parent=gene-CCO46_RS12630;Dbxref=GenBank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=CCO46_RS12630;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 78298 78933 . + . ID=gene-CCO46_RS12635;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=CCO46_RS12635;old_locus_tag=CCO46_12640 NZ_NPOH01000009.1 Protein Homology CDS 78298 78933 . + 0 ID=cds-WP_000626863.1;Parent=gene-CCO46_RS12635;Dbxref=GenBank:WP_000626863.1;Name=WP_000626863.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=CCO46_RS12635;product=arginine exporter ArgO;protein_id=WP_000626863.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 79027 79773 . + . ID=gene-CCO46_RS12640;Name=CCO46_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12640;old_locus_tag=CCO46_12645 NZ_NPOH01000009.1 Protein Homology CDS 79027 79773 . + 0 ID=cds-WP_000669854.1;Parent=gene-CCO46_RS12640;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=CCO46_RS12640;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 80039 80932 . - . ID=gene-CCO46_RS12650;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=CCO46_RS12650;old_locus_tag=CCO46_12655 NZ_NPOH01000009.1 Protein Homology CDS 80039 80932 . - 0 ID=cds-WP_000828345.1;Parent=gene-CCO46_RS12650;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=CCO46_RS12650;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 81086 81745 . + . ID=gene-CCO46_RS12655;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CCO46_RS12655;old_locus_tag=CCO46_12660 NZ_NPOH01000009.1 Protein Homology CDS 81086 81745 . + 0 ID=cds-WP_000189741.1;Parent=gene-CCO46_RS12655;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=CCO46_RS12655;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 82012 83244 . + . ID=gene-CCO46_RS12660;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CCO46_RS12660;old_locus_tag=CCO46_12665 NZ_NPOH01000009.1 Protein Homology CDS 82012 83244 . + 0 ID=cds-WP_001151627.1;Parent=gene-CCO46_RS12660;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=CCO46_RS12660;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 83625 84221 . - . ID=gene-CCO46_RS12665;Name=CCO46_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12665;old_locus_tag=CCO46_12670 NZ_NPOH01000009.1 Protein Homology CDS 83625 84221 . - 0 ID=cds-WP_058331715.1;Parent=gene-CCO46_RS12665;Dbxref=GenBank:WP_058331715.1;Name=WP_058331715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=CCO46_RS12665;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_058331715.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 84242 84425 . - . ID=gene-CCO46_RS12670;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CCO46_RS12670;old_locus_tag=CCO46_12675 NZ_NPOH01000009.1 cmsearch ncRNA 84242 84425 . - . ID=rna-CCO46_RS12670;Parent=gene-CCO46_RS12670;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS12670;product=6S RNA NZ_NPOH01000009.1 cmsearch exon 84242 84425 . - . ID=exon-CCO46_RS12670-1;Parent=rna-CCO46_RS12670;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO46_RS12670;product=6S RNA NZ_NPOH01000009.1 RefSeq gene 84467 84796 . - . ID=gene-CCO46_RS12675;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CCO46_RS12675;old_locus_tag=CCO46_12680 NZ_NPOH01000009.1 Protein Homology CDS 84467 84796 . - 0 ID=cds-WP_001276011.1;Parent=gene-CCO46_RS12675;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=CCO46_RS12675;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 84963 85541 . + . ID=gene-CCO46_RS12685;Name=CCO46_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12685;old_locus_tag=CCO46_12690 NZ_NPOH01000009.1 Protein Homology CDS 84963 85541 . + 0 ID=cds-WP_000027236.1;Parent=gene-CCO46_RS12685;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=CCO46_RS12685;product=YecA family protein;protein_id=WP_000027236.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 85567 86883 . + . ID=gene-CCO46_RS12690;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=CCO46_RS12690;old_locus_tag=CCO46_12695 NZ_NPOH01000009.1 Protein Homology CDS 85567 86883 . + 0 ID=cds-WP_000193681.1;Parent=gene-CCO46_RS12690;Dbxref=GenBank:WP_000193681.1;Name=WP_000193681.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=CCO46_RS12690;product=Xaa-Pro aminopeptidase;protein_id=WP_000193681.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 86880 88058 . + . ID=gene-CCO46_RS12695;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=CCO46_RS12695;old_locus_tag=CCO46_12700 NZ_NPOH01000009.1 Protein Homology CDS 86880 88058 . + 0 ID=cds-WP_094887532.1;Parent=gene-CCO46_RS12695;Dbxref=GenBank:WP_094887532.1;Name=WP_094887532.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=CCO46_RS12695;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_094887532.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 88184 89386 . + . ID=gene-CCO46_RS12700;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=CCO46_RS12700;old_locus_tag=CCO46_12705 NZ_NPOH01000009.1 Protein Homology CDS 88184 89386 . + 0 ID=cds-WP_001192144.1;Parent=gene-CCO46_RS12700;Dbxref=GenBank:WP_001192144.1;Name=WP_001192144.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=CCO46_RS12700;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192144.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 89841 90935 . + . ID=gene-CCO46_RS12705;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CCO46_RS12705;old_locus_tag=CCO46_12710 NZ_NPOH01000009.1 Protein Homology CDS 89841 90935 . + 0 ID=cds-WP_000068738.1;Parent=gene-CCO46_RS12705;Dbxref=GenBank:WP_000068738.1;Name=WP_000068738.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=CCO46_RS12705;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068738.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 90961 91350 . + . ID=gene-CCO46_RS12710;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CCO46_RS12710;old_locus_tag=CCO46_12715 NZ_NPOH01000009.1 Protein Homology CDS 90961 91350 . + 0 ID=cds-WP_001295377.1;Parent=gene-CCO46_RS12710;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=CCO46_RS12710;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 91513 94386 . + . ID=gene-CCO46_RS12715;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=CCO46_RS12715;old_locus_tag=CCO46_12720 NZ_NPOH01000009.1 Protein Homology CDS 91513 94386 . + 0 ID=cds-WP_080159978.1;Parent=gene-CCO46_RS12715;Dbxref=GenBank:WP_080159978.1;Name=WP_080159978.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=CCO46_RS12715;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_080159978.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 94842 95735 . + . ID=gene-CCO46_RS12725;Name=CCO46_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12725;old_locus_tag=CCO46_12730 NZ_NPOH01000009.1 Protein Homology CDS 94842 95735 . + 0 ID=cds-WP_000819373.1;Parent=gene-CCO46_RS12725;Dbxref=GenBank:WP_000819373.1;Name=WP_000819373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=CCO46_RS12725;product=transporter;protein_id=WP_000819373.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 95783 97216 . - . ID=gene-CCO46_RS12730;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=CCO46_RS12730;old_locus_tag=CCO46_12735 NZ_NPOH01000009.1 Protein Homology CDS 95783 97216 . - 0 ID=cds-WP_097363347.1;Parent=gene-CCO46_RS12730;Dbxref=GenBank:WP_097363347.1;Name=WP_097363347.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=CCO46_RS12730;product=6-phospho-beta-glucosidase BglA;protein_id=WP_097363347.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 97374 97685 . + . ID=gene-CCO46_RS12735;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=CCO46_RS12735;old_locus_tag=CCO46_12740 NZ_NPOH01000009.1 Protein Homology CDS 97374 97685 . + 0 ID=cds-WP_001182976.1;Parent=gene-CCO46_RS12735;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=CCO46_RS12735;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 97849 98508 . + . ID=gene-CCO46_RS12740;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CCO46_RS12740;old_locus_tag=CCO46_12745 NZ_NPOH01000009.1 Protein Homology CDS 97849 98508 . + 0 ID=cds-WP_000250289.1;Parent=gene-CCO46_RS12740;Dbxref=GenBank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=CCO46_RS12740;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250289.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 98624 99604 . - . ID=gene-CCO46_RS12750;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=CCO46_RS12750;old_locus_tag=CCO46_12755 NZ_NPOH01000009.1 Protein Homology CDS 98624 99604 . - 0 ID=cds-WP_000874178.1;Parent=gene-CCO46_RS12750;Dbxref=GenBank:WP_000874178.1;Name=WP_000874178.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=CCO46_RS12750;product=tRNA-modifying protein YgfZ;protein_id=WP_000874178.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 99854 100120 . + . ID=gene-CCO46_RS12760;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=CCO46_RS12760;old_locus_tag=CCO46_12765 NZ_NPOH01000009.1 Protein Homology CDS 99854 100120 . + 0 ID=cds-WP_000351186.1;Parent=gene-CCO46_RS12760;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=CCO46_RS12760;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 100101 100514 . + . ID=gene-CCO46_RS12765;Name=CCO46_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12765;old_locus_tag=CCO46_12770 NZ_NPOH01000009.1 Protein Homology CDS 100101 100514 . + 0 ID=cds-WP_000244756.1;Parent=gene-CCO46_RS12765;Dbxref=GenBank:WP_000244756.1;Name=WP_000244756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=CCO46_RS12765;product=protein YgfX;protein_id=WP_000244756.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 100567 101088 . - . ID=gene-CCO46_RS12770;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=CCO46_RS12770;old_locus_tag=CCO46_12775 NZ_NPOH01000009.1 Protein Homology CDS 100567 101088 . - 0 ID=cds-WP_001055885.1;Parent=gene-CCO46_RS12770;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=CCO46_RS12770;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 101201 102097 . + . ID=gene-CCO46_RS12775;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CCO46_RS12775;old_locus_tag=CCO46_12780 NZ_NPOH01000009.1 Protein Homology CDS 101201 102097 . + 0 ID=cds-WP_000434300.1;Parent=gene-CCO46_RS12775;Dbxref=GenBank:WP_000434300.1;Name=WP_000434300.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=CCO46_RS12775;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434300.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 102121 102834 . + . ID=gene-CCO46_RS12780;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=CCO46_RS12780;old_locus_tag=CCO46_12785 NZ_NPOH01000009.1 Protein Homology CDS 102121 102834 . + 0 ID=cds-WP_000745616.1;Parent=gene-CCO46_RS12780;Dbxref=GenBank:WP_000745616.1;Name=WP_000745616.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=CCO46_RS12780;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745616.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 102840 104573 . + . ID=gene-CCO46_RS12785;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CCO46_RS12785;old_locus_tag=CCO46_12790 NZ_NPOH01000009.1 Protein Homology CDS 102840 104573 . + 0 ID=cds-WP_097363348.1;Parent=gene-CCO46_RS12785;Dbxref=GenBank:WP_097363348.1;Name=WP_097363348.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=CCO46_RS12785;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_097363348.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 104678 105776 . + . ID=gene-CCO46_RS12790;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CCO46_RS12790;old_locus_tag=CCO46_12795 NZ_NPOH01000009.1 Protein Homology CDS 104678 104752 . + 0 ID=cds-WP_010989230.1;Parent=gene-CCO46_RS12790;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO46_RS12790;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPOH01000009.1 Protein Homology CDS 104754 105776 . + 0 ID=cds-WP_010989230.1;Parent=gene-CCO46_RS12790;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO46_RS12790;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 105786 107303 . + . ID=gene-CCO46_RS12795;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CCO46_RS12795;old_locus_tag=CCO46_12800 NZ_NPOH01000009.1 Protein Homology CDS 105786 107303 . + 0 ID=cds-WP_000003339.1;Parent=gene-CCO46_RS12795;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=CCO46_RS12795;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 107379 107924 . - . ID=gene-CCO46_RS12800;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=CCO46_RS12800;old_locus_tag=CCO46_12805 NZ_NPOH01000009.1 Protein Homology CDS 107379 107924 . - 0 ID=cds-WP_000133994.1;Parent=gene-CCO46_RS12800;Dbxref=GenBank:WP_000133994.1;Name=WP_000133994.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=CCO46_RS12800;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000133994.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 108189 108947 . + . ID=gene-CCO46_RS12810;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=CCO46_RS12810;old_locus_tag=CCO46_12815 NZ_NPOH01000009.1 Protein Homology CDS 108189 108947 . + 0 ID=cds-WP_000244325.1;Parent=gene-CCO46_RS12810;Dbxref=GenBank:WP_000244325.1;Name=WP_000244325.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=CCO46_RS12810;product=amidase activator ActS;protein_id=WP_000244325.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 109027 109100 . + . ID=gene-CCO46_RS12815;Name=CCO46_RS12815;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS12815;old_locus_tag=CCO46_12820 NZ_NPOH01000009.1 tRNAscan-SE tRNA 109027 109100 . + . ID=rna-CCO46_RS12815;Parent=gene-CCO46_RS12815;anticodon=(pos:109059..109061);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS12815;product=tRNA-Gly NZ_NPOH01000009.1 tRNAscan-SE exon 109027 109100 . + . ID=exon-CCO46_RS12815-1;Parent=rna-CCO46_RS12815;anticodon=(pos:109059..109061);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS12815;product=tRNA-Gly NZ_NPOH01000009.1 RefSeq gene 109232 110038 . - . ID=gene-CCO46_RS12820;Name=CCO46_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12820;old_locus_tag=CCO46_12825 NZ_NPOH01000009.1 Protein Homology CDS 109232 110038 . - 0 ID=cds-WP_077905136.1;Parent=gene-CCO46_RS12820;Dbxref=GenBank:WP_077905136.1;Name=WP_077905136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=CCO46_RS12820;product=DUF1460 domain-containing protein;protein_id=WP_077905136.1;transl_table=11 NZ_NPOH01000009.1 RefSeq pseudogene 110229 110399 . + . ID=gene-CCO46_RS24945;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=pseudogene;locus_tag=CCO46_RS24945;partial=true;pseudo=true;start_range=.,110229 NZ_NPOH01000009.1 Protein Homology CDS 110229 110399 . + 0 ID=cds-CCO46_RS24945;Parent=gene-CCO46_RS24945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=CCO46_RS24945;partial=true;product=tRNA(fMet)-specific endonuclease VapC;pseudo=true;start_range=.,110229;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 111206 111742 . + . ID=gene-CCO46_RS12840;Name=CCO46_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12840;old_locus_tag=CCO46_12845 NZ_NPOH01000009.1 Protein Homology CDS 111206 111742 . + 0 ID=cds-WP_001038499.1;Parent=gene-CCO46_RS12840;Dbxref=GenBank:WP_001038499.1;Name=WP_001038499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=CCO46_RS12840;product=STM3031 family outer membrane protein;protein_id=WP_001038499.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 111789 112421 . + . ID=gene-CCO46_RS12845;Name=CCO46_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12845;old_locus_tag=CCO46_12850 NZ_NPOH01000009.1 Protein Homology CDS 111789 112421 . + 0 ID=cds-WP_000835257.1;Parent=gene-CCO46_RS12845;Dbxref=GenBank:WP_000835257.1;Name=WP_000835257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=CCO46_RS12845;product=YfdX family protein;protein_id=WP_000835257.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 113139 113720 . + . ID=gene-CCO46_RS12850;Name=CCO46_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12850;old_locus_tag=CCO46_12855 NZ_NPOH01000009.1 Protein Homology CDS 113139 113720 . + 0 ID=cds-WP_097363349.1;Parent=gene-CCO46_RS12850;Dbxref=GenBank:WP_097363349.1;Name=WP_097363349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406296.1;locus_tag=CCO46_RS12850;product=fimbrial protein;protein_id=WP_097363349.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 113840 116329 . + . ID=gene-CCO46_RS12855;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=CCO46_RS12855;old_locus_tag=CCO46_12860 NZ_NPOH01000009.1 Protein Homology CDS 113840 116329 . + 0 ID=cds-WP_079981332.1;Parent=gene-CCO46_RS12855;Dbxref=GenBank:WP_079981332.1;Name=WP_079981332.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=CCO46_RS12855;product=fimbrial outer membrane usher protein StdB;protein_id=WP_079981332.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 116370 117113 . + . ID=gene-CCO46_RS12860;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=CCO46_RS12860;old_locus_tag=CCO46_12865 NZ_NPOH01000009.1 Protein Homology CDS 116370 117113 . + 0 ID=cds-WP_097363350.1;Parent=gene-CCO46_RS12860;Dbxref=GenBank:WP_097363350.1;Name=WP_097363350.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=CCO46_RS12860;product=fimbrial biogenesis chaperone StdC;protein_id=WP_097363350.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 117110 118192 . + . ID=gene-CCO46_RS12865;Name=CCO46_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12865;old_locus_tag=CCO46_12870 NZ_NPOH01000009.1 Protein Homology CDS 117110 118192 . + 0 ID=cds-WP_097363351.1;Parent=gene-CCO46_RS12865;Dbxref=GenBank:WP_097363351.1;Name=WP_097363351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=CCO46_RS12865;product=fimbrial protein;protein_id=WP_097363351.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 118302 118808 . + . ID=gene-CCO46_RS12870;Name=CCO46_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12870;old_locus_tag=CCO46_12875 NZ_NPOH01000009.1 Protein Homology CDS 118302 118808 . + 0 ID=cds-WP_000093333.1;Parent=gene-CCO46_RS12870;Dbxref=GenBank:WP_000093333.1;Name=WP_000093333.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=CCO46_RS12870;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000093333.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 118795 119553 . + . ID=gene-CCO46_RS12875;Name=CCO46_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12875;old_locus_tag=CCO46_12880 NZ_NPOH01000009.1 Protein Homology CDS 118795 119553 . + 0 ID=cds-WP_058331852.1;Parent=gene-CCO46_RS12875;Dbxref=GenBank:WP_058331852.1;Name=WP_058331852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=CCO46_RS12875;product=hypothetical protein;protein_id=WP_058331852.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 119763 120569 . - . ID=gene-CCO46_RS12880;Name=CCO46_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12880;old_locus_tag=CCO46_12885 NZ_NPOH01000009.1 Protein Homology CDS 119763 120569 . - 0 ID=cds-WP_097363352.1;Parent=gene-CCO46_RS12880;Dbxref=GenBank:WP_097363352.1;Name=WP_097363352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=CCO46_RS12880;product=nickel/cobalt efflux protein RcnA;protein_id=WP_097363352.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 120692 120964 . + . ID=gene-CCO46_RS12885;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=CCO46_RS12885;old_locus_tag=CCO46_12890 NZ_NPOH01000009.1 Protein Homology CDS 120692 120964 . + 0 ID=cds-WP_000019953.1;Parent=gene-CCO46_RS12885;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=CCO46_RS12885;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 120995 122224 . - . ID=gene-CCO46_RS12890;Name=CCO46_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12890;old_locus_tag=CCO46_12895 NZ_NPOH01000009.1 Protein Homology CDS 120995 122224 . - 0 ID=cds-WP_000036837.1;Parent=gene-CCO46_RS12890;Dbxref=GenBank:WP_000036837.1;Name=WP_000036837.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=CCO46_RS12890;product=amino acid permease;protein_id=WP_000036837.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 122366 122821 . - . ID=gene-CCO46_RS12895;Name=CCO46_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12895;old_locus_tag=CCO46_12900 NZ_NPOH01000009.1 Protein Homology CDS 122366 122821 . - 0 ID=cds-WP_001519547.1;Parent=gene-CCO46_RS12895;Dbxref=GenBank:WP_001519547.1;Name=WP_001519547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=CCO46_RS12895;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001519547.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 122925 123788 . + . ID=gene-CCO46_RS12900;Name=CCO46_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12900;old_locus_tag=CCO46_12905 NZ_NPOH01000009.1 Protein Homology CDS 122925 123788 . + 0 ID=cds-WP_001270770.1;Parent=gene-CCO46_RS12900;Dbxref=GenBank:WP_001270770.1;Name=WP_001270770.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=CCO46_RS12900;product=LysR family transcriptional regulator;protein_id=WP_001270770.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 123911 125089 . + . ID=gene-CCO46_RS12905;Name=CCO46_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12905;old_locus_tag=CCO46_12910 NZ_NPOH01000009.1 Protein Homology CDS 123911 125089 . + 0 ID=cds-WP_000665980.1;Parent=gene-CCO46_RS12905;Dbxref=GenBank:WP_000665980.1;Name=WP_000665980.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=CCO46_RS12905;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665980.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 125520 126356 . + . ID=gene-CCO46_RS12920;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=CCO46_RS12920;old_locus_tag=CCO46_12925 NZ_NPOH01000009.1 Protein Homology CDS 125520 126356 . + 0 ID=cds-WP_000383274.1;Parent=gene-CCO46_RS12920;Dbxref=GenBank:WP_000383274.1;Name=WP_000383274.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=CCO46_RS12920;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383274.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 126413 127174 . + . ID=gene-CCO46_RS12925;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=CCO46_RS12925;old_locus_tag=CCO46_12930 NZ_NPOH01000009.1 Protein Homology CDS 126413 127174 . + 0 ID=cds-WP_000602490.1;Parent=gene-CCO46_RS12925;Dbxref=GenBank:WP_000602490.1;Name=WP_000602490.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=CCO46_RS12925;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602490.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 127528 128946 . + . ID=gene-CCO46_RS12930;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=CCO46_RS12930;old_locus_tag=CCO46_12935 NZ_NPOH01000009.1 Protein Homology CDS 127528 128946 . + 0 ID=cds-WP_000253650.1;Parent=gene-CCO46_RS12930;Dbxref=GenBank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=CCO46_RS12930;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 129059 129766 . + . ID=gene-CCO46_RS12935;Name=CCO46_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12935;old_locus_tag=CCO46_12940 NZ_NPOH01000009.1 Protein Homology CDS 129059 129766 . + 0 ID=cds-WP_000848633.1;Parent=gene-CCO46_RS12935;Dbxref=GenBank:WP_000848633.1;Name=WP_000848633.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=CCO46_RS12935;product=aspartate/glutamate racemase;protein_id=WP_000848633.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 129738 130673 . - . ID=gene-CCO46_RS12940;Name=CCO46_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12940;old_locus_tag=CCO46_12945 NZ_NPOH01000009.1 Protein Homology CDS 129738 130673 . - 0 ID=cds-WP_000741798.1;Parent=gene-CCO46_RS12940;Dbxref=GenBank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=CCO46_RS12940;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 130791 132053 . + . ID=gene-CCO46_RS12945;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CCO46_RS12945;old_locus_tag=CCO46_12950 NZ_NPOH01000009.1 Protein Homology CDS 130791 132053 . + 0 ID=cds-WP_000056587.1;Parent=gene-CCO46_RS12945;Dbxref=GenBank:WP_000056587.1;Name=WP_000056587.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=CCO46_RS12945;product=diaminopimelate decarboxylase;protein_id=WP_000056587.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 132063 133085 . - . ID=gene-CCO46_RS12950;Name=CCO46_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12950;old_locus_tag=CCO46_12955 NZ_NPOH01000009.1 Protein Homology CDS 132063 133085 . - 0 ID=cds-WP_000968350.1;Parent=gene-CCO46_RS12950;Dbxref=GenBank:WP_000968350.1;Name=WP_000968350.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=CCO46_RS12950;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968350.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 133096 134124 . - . ID=gene-CCO46_RS12955;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=CCO46_RS12955;old_locus_tag=CCO46_12960 NZ_NPOH01000009.1 Protein Homology CDS 133096 134124 . - 0 ID=cds-WP_000201030.1;Parent=gene-CCO46_RS12955;Dbxref=GenBank:WP_000201030.1;Name=WP_000201030.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=CCO46_RS12955;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201030.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 134332 134559 . + . ID=gene-CCO46_RS12960;Name=CCO46_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12960;old_locus_tag=CCO46_12965 NZ_NPOH01000009.1 GeneMarkS-2+ CDS 134332 134559 . + 0 ID=cds-WP_071525129.1;Parent=gene-CCO46_RS12960;Dbxref=GenBank:WP_071525129.1;Name=WP_071525129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO46_RS12960;product=hypothetical protein;protein_id=WP_071525129.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 134716 136875 . + . ID=gene-CCO46_RS12965;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=CCO46_RS12965;old_locus_tag=CCO46_12970 NZ_NPOH01000009.1 Protein Homology CDS 134716 136875 . + 0 ID=cds-WP_000896101.1;Parent=gene-CCO46_RS12965;Dbxref=GenBank:WP_000896101.1;Name=WP_000896101.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=CCO46_RS12965;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000896101.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 136868 138070 . + . ID=gene-CCO46_RS12970;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=CCO46_RS12970;old_locus_tag=CCO46_12975 NZ_NPOH01000009.1 Protein Homology CDS 136868 138070 . + 0 ID=cds-WP_000004686.1;Parent=gene-CCO46_RS12970;Dbxref=GenBank:WP_000004686.1;Name=WP_000004686.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=CCO46_RS12970;product=lysophospholipid transporter LplT;protein_id=WP_000004686.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 138157 139197 . - . ID=gene-CCO46_RS12975;Name=CCO46_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12975;old_locus_tag=CCO46_12980 NZ_NPOH01000009.1 Protein Homology CDS 138157 139197 . - 0 ID=cds-WP_000558959.1;Parent=gene-CCO46_RS12975;Dbxref=GenBank:WP_000558959.1;Name=WP_000558959.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=CCO46_RS12975;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558959.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 139388 139606 . - . ID=gene-CCO46_RS12980;Name=CCO46_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12980;old_locus_tag=CCO46_12985 NZ_NPOH01000009.1 Protein Homology CDS 139388 139606 . - 0 ID=cds-WP_000758662.1;Parent=gene-CCO46_RS12980;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=CCO46_RS12980;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 139776 140489 . - . ID=gene-CCO46_RS12985;Name=CCO46_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS12985;old_locus_tag=CCO46_12990 NZ_NPOH01000009.1 Protein Homology CDS 139776 140489 . - 0 ID=cds-WP_000895635.1;Parent=gene-CCO46_RS12985;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=CCO46_RS12985;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 140671 141366 . - . ID=gene-CCO46_RS12990;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=CCO46_RS12990;old_locus_tag=CCO46_12995 NZ_NPOH01000009.1 Protein Homology CDS 140671 141366 . - 0 ID=cds-WP_001274930.1;Parent=gene-CCO46_RS12990;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=CCO46_RS12990;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 142049 142579 . + . ID=gene-CCO46_RS12995;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=CCO46_RS12995;old_locus_tag=CCO46_13000 NZ_NPOH01000009.1 Protein Homology CDS 142049 142579 . + 0 ID=cds-WP_000564481.1;Parent=gene-CCO46_RS12995;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=CCO46_RS12995;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 142592 144838 . + . ID=gene-CCO46_RS13000;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CCO46_RS13000;old_locus_tag=CCO46_13005 NZ_NPOH01000009.1 Protein Homology CDS 142592 144838 . + 0 ID=cds-WP_000957888.1;Parent=gene-CCO46_RS13000;Dbxref=GenBank:WP_000957888.1;Name=WP_000957888.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=CCO46_RS13000;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957888.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 145054 145929 . + . ID=gene-CCO46_RS13005;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CCO46_RS13005;old_locus_tag=CCO46_13010 NZ_NPOH01000009.1 Protein Homology CDS 145054 145929 . + 0 ID=cds-WP_000204645.1;Parent=gene-CCO46_RS13005;Dbxref=GenBank:WP_000204645.1;Name=WP_000204645.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=CCO46_RS13005;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 145936 146730 . + . ID=gene-CCO46_RS13010;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=CCO46_RS13010;old_locus_tag=CCO46_13015 NZ_NPOH01000009.1 Protein Homology CDS 145936 146730 . + 0 ID=cds-WP_000816247.1;Parent=gene-CCO46_RS13010;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=CCO46_RS13010;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 146915 147385 . + . ID=gene-CCO46_RS13020;Name=CCO46_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13020;old_locus_tag=CCO46_13025 NZ_NPOH01000009.1 Protein Homology CDS 146915 147385 . + 0 ID=cds-WP_000744668.1;Parent=gene-CCO46_RS13020;Dbxref=GenBank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=CCO46_RS13020;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 147376 147939 . + . ID=gene-CCO46_RS13025;Name=CCO46_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13025;old_locus_tag=CCO46_13030 NZ_NPOH01000009.1 Protein Homology CDS 147376 147939 . + 0 ID=cds-WP_000029150.1;Parent=gene-CCO46_RS13025;Dbxref=GenBank:WP_000029150.1;Name=WP_000029150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=CCO46_RS13025;product=prepilin peptidase-dependent protein;protein_id=WP_000029150.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 147936 148343 . + . ID=gene-CCO46_RS13030;Name=CCO46_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13030;old_locus_tag=CCO46_13035 NZ_NPOH01000009.1 Protein Homology CDS 147936 148343 . + 0 ID=cds-WP_001078535.1;Parent=gene-CCO46_RS13030;Dbxref=GenBank:WP_001078535.1;Name=WP_001078535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=CCO46_RS13030;product=DUF2509 family protein;protein_id=WP_001078535.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 148328 148648 . + . ID=gene-CCO46_RS13035;Name=CCO46_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13035;old_locus_tag=CCO46_13040 NZ_NPOH01000009.1 Protein Homology CDS 148328 148648 . + 0 ID=cds-WP_000019294.1;Parent=gene-CCO46_RS13035;Dbxref=GenBank:WP_000019294.1;Name=WP_000019294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=CCO46_RS13035;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019294.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 148664 152035 . + . ID=gene-CCO46_RS13040;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=CCO46_RS13040;old_locus_tag=CCO46_13045 NZ_NPOH01000009.1 Protein Homology CDS 148664 152035 . + 0 ID=cds-WP_097363353.1;Parent=gene-CCO46_RS13040;Dbxref=GenBank:WP_097363353.1;Name=WP_097363353.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=CCO46_RS13040;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_097363353.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 152213 155101 . + . ID=gene-CCO46_RS13045;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=CCO46_RS13045;old_locus_tag=CCO46_13050 NZ_NPOH01000009.1 Protein Homology CDS 152213 155101 . + 0 ID=cds-WP_097363354.1;Parent=gene-CCO46_RS13045;Dbxref=GenBank:WP_097363354.1;Name=WP_097363354.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=CCO46_RS13045;product=pitrilysin;protein_id=WP_097363354.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 155094 158639 . + . ID=gene-CCO46_RS13050;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=CCO46_RS13050;old_locus_tag=CCO46_13055 NZ_NPOH01000009.1 Protein Homology CDS 155094 158639 . + 0 ID=cds-WP_094882212.1;Parent=gene-CCO46_RS13050;Dbxref=GenBank:WP_094882212.1;Name=WP_094882212.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=CCO46_RS13050;product=exodeoxyribonuclease V subunit beta;protein_id=WP_094882212.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 158636 160471 . + . ID=gene-CCO46_RS13055;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=CCO46_RS13055;old_locus_tag=CCO46_13060 NZ_NPOH01000009.1 Protein Homology CDS 158636 160471 . + 0 ID=cds-WP_097363355.1;Parent=gene-CCO46_RS13055;Dbxref=GenBank:WP_097363355.1;Name=WP_097363355.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=CCO46_RS13055;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_097363355.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 160574 161905 . - . ID=gene-CCO46_RS13060;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=CCO46_RS13060;old_locus_tag=CCO46_13065 NZ_NPOH01000009.1 Protein Homology CDS 160574 161905 . - 0 ID=cds-WP_000588964.1;Parent=gene-CCO46_RS13060;Dbxref=GenBank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=CCO46_RS13060;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 162138 163391 . + . ID=gene-CCO46_RS13065;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=CCO46_RS13065;old_locus_tag=CCO46_13070 NZ_NPOH01000009.1 Protein Homology CDS 162138 163391 . + 0 ID=cds-WP_000011922.1;Parent=gene-CCO46_RS13065;Dbxref=GenBank:WP_000011922.1;Name=WP_000011922.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=CCO46_RS13065;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011922.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 163501 163577 . - . ID=gene-CCO46_RS13070;Name=CCO46_RS13070;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO46_RS13070;old_locus_tag=CCO46_13075 NZ_NPOH01000009.1 tRNAscan-SE tRNA 163501 163577 . - . ID=rna-CCO46_RS13070;Parent=gene-CCO46_RS13070;anticodon=(pos:complement(163541..163543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS13070;product=tRNA-Met NZ_NPOH01000009.1 tRNAscan-SE exon 163501 163577 . - . ID=exon-CCO46_RS13070-1;Parent=rna-CCO46_RS13070;anticodon=(pos:complement(163541..163543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO46_RS13070;product=tRNA-Met NZ_NPOH01000009.1 RefSeq gene 163785 164882 . + . ID=gene-CCO46_RS13075;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=CCO46_RS13075;old_locus_tag=CCO46_13080 NZ_NPOH01000009.1 Protein Homology CDS 163785 164882 . + 0 ID=cds-WP_000678621.1;Parent=gene-CCO46_RS13075;Dbxref=GenBank:WP_000678621.1;Name=WP_000678621.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=CCO46_RS13075;product=murein transglycosylase A;protein_id=WP_000678621.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 164992 165798 . + . ID=gene-CCO46_RS13080;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=CCO46_RS13080;old_locus_tag=CCO46_13085 NZ_NPOH01000009.1 Protein Homology CDS 164992 165798 . + 0 ID=cds-WP_000117748.1;Parent=gene-CCO46_RS13080;Dbxref=GenBank:WP_000117748.1;Name=WP_000117748.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=CCO46_RS13080;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117748.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 165850 166737 . - . ID=gene-CCO46_RS13085;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO46_RS13085;old_locus_tag=CCO46_13090 NZ_NPOH01000009.1 Protein Homology CDS 165850 166737 . - 0 ID=cds-WP_014343890.1;Parent=gene-CCO46_RS13085;Dbxref=GenBank:WP_014343890.1;Name=WP_014343890.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=CCO46_RS13085;product=EamA family transporter RarD;protein_id=WP_014343890.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 167037 167480 . - . ID=gene-CCO46_RS13090;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=CCO46_RS13090;old_locus_tag=CCO46_13095 NZ_NPOH01000009.1 Protein Homology CDS 167037 167480 . - 0 ID=cds-WP_080160176.1;Parent=gene-CCO46_RS13090;Dbxref=GenBank:WP_080160176.1;Name=WP_080160176.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=CCO46_RS13090;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_080160176.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 167480 168685 . - . ID=gene-CCO46_RS13095;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=CCO46_RS13095;old_locus_tag=CCO46_13100 NZ_NPOH01000009.1 Protein Homology CDS 167480 168685 . - 0 ID=cds-WP_080160175.1;Parent=gene-CCO46_RS13095;Dbxref=GenBank:WP_080160175.1;Name=WP_080160175.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=CCO46_RS13095;product=cysteine desulfurase CsdA;protein_id=WP_080160175.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 168878 169105 . + . ID=gene-CCO46_RS13100;Name=CCO46_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13100;old_locus_tag=CCO46_13105 NZ_NPOH01000009.1 Protein Homology CDS 168878 169105 . + 0 ID=cds-WP_000750393.1;Parent=gene-CCO46_RS13100;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=CCO46_RS13100;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 169452 170369 . + . ID=gene-CCO46_RS13105;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=CCO46_RS13105;old_locus_tag=CCO46_13110 NZ_NPOH01000009.1 Protein Homology CDS 169452 170369 . + 0 ID=cds-WP_000044409.1;Parent=gene-CCO46_RS13105;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=CCO46_RS13105;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 170388 170783 . + . ID=gene-CCO46_RS13110;Name=CCO46_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO46_RS13110;old_locus_tag=CCO46_13115 NZ_NPOH01000009.1 Protein Homology CDS 170388 170783 . + 0 ID=cds-WP_000203913.1;Parent=gene-CCO46_RS13110;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=CCO46_RS13110;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 170776 171876 . + . ID=gene-CCO46_RS13115;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=CCO46_RS13115;old_locus_tag=CCO46_13120 NZ_NPOH01000009.1 Protein Homology CDS 170776 171876 . + 0 ID=cds-WP_001045494.1;Parent=gene-CCO46_RS13115;Dbxref=GenBank:WP_001045494.1;Name=WP_001045494.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=CCO46_RS13115;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045494.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 171935 172645 . - . ID=gene-CCO46_RS13120;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=CCO46_RS13120;old_locus_tag=CCO46_13125 NZ_NPOH01000009.1 Protein Homology CDS 171935 172645 . - 0 ID=cds-WP_000642330.1;Parent=gene-CCO46_RS13120;Dbxref=GenBank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=CCO46_RS13120;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 172703 173125 . - . ID=gene-CCO46_RS13125;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=CCO46_RS13125;old_locus_tag=CCO46_13130 NZ_NPOH01000009.1 Protein Homology CDS 172703 173125 . - 0 ID=cds-WP_023228755.1;Parent=gene-CCO46_RS13125;Dbxref=GenBank:WP_023228755.1;Name=WP_023228755.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=CCO46_RS13125;product=L-fucose mutarotase;protein_id=WP_023228755.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 173127 174545 . - . ID=gene-CCO46_RS13130;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=CCO46_RS13130;old_locus_tag=CCO46_13135 NZ_NPOH01000009.1 Protein Homology CDS 173127 174545 . - 0 ID=cds-WP_097363356.1;Parent=gene-CCO46_RS13130;Dbxref=GenBank:WP_097363356.1;Name=WP_097363356.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=CCO46_RS13130;product=L-fuculokinase;protein_id=WP_097363356.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 174646 176421 . - . ID=gene-CCO46_RS13135;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=CCO46_RS13135;old_locus_tag=CCO46_13140 NZ_NPOH01000009.1 Protein Homology CDS 174646 176421 . - 0 ID=cds-WP_000724126.1;Parent=gene-CCO46_RS13135;Dbxref=GenBank:WP_000724126.1;Name=WP_000724126.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=CCO46_RS13135;product=L-fucose isomerase;protein_id=WP_000724126.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 176453 177769 . - . ID=gene-CCO46_RS13140;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO46_RS13140;old_locus_tag=CCO46_13145 NZ_NPOH01000009.1 Protein Homology CDS 176453 177769 . - 0 ID=cds-WP_000528622.1;Parent=gene-CCO46_RS13140;Dbxref=GenBank:WP_000528622.1;Name=WP_000528622.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=CCO46_RS13140;product=L-fucose:H+ symporter permease;protein_id=WP_000528622.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 178326 178973 . + . ID=gene-CCO46_RS13145;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=CCO46_RS13145;old_locus_tag=CCO46_13150 NZ_NPOH01000009.1 Protein Homology CDS 178326 178973 . + 0 ID=cds-WP_000440828.1;Parent=gene-CCO46_RS13145;Dbxref=GenBank:WP_000440828.1;Name=WP_000440828.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=CCO46_RS13145;product=L-fuculose-phosphate aldolase;protein_id=WP_000440828.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 178990 180138 . + . ID=gene-CCO46_RS13150;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO46_RS13150;old_locus_tag=CCO46_13155 NZ_NPOH01000009.1 Protein Homology CDS 178990 180138 . + 0 ID=cds-WP_000013562.1;Parent=gene-CCO46_RS13150;Dbxref=GenBank:WP_000013562.1;Name=WP_000013562.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=CCO46_RS13150;product=lactaldehyde reductase;protein_id=WP_000013562.1;transl_table=11 NZ_NPOH01000009.1 RefSeq gene 180230 180985 . - . ID=gene-CCO46_RS13155;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=CCO46_RS13155;old_locus_tag=CCO46_13160 NZ_NPOH01000009.1 Protein Homology CDS 180230 180985 . - 0 ID=cds-WP_001519360.1;Parent=gene-CCO46_RS13155;Dbxref=GenBank:WP_001519360.1;Name=WP_001519360.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=CCO46_RS13155;product=flap endonuclease Xni;protein_id=WP_001519360.1;transl_table=11 ###